{"meta":{"query_hash":"28566060d31a","filters":{"venue":"Methods in molecular biology"},"cohort_total":3129,"direct_labels_cover":13,"predictions_cover":3129,"exported":3129,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/28566060d31a","api":"https://metacan.xera.ac/api/v1/cohort?venue=Methods+in+molecular+biology"},"results":[{"id":"W100382268","doi":"10.1007/978-1-4614-7209-4_4","title":"Development of MRM-Based Assays for the Absolute Quantitation of Plasma Proteins","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia; University of Victoria","funders":"Genome British Columbia; Genome Canada","keywords":"Chemistry; Selected reaction monitoring; Triple quadrupole mass spectrometer; Peptide; Chromatography; Tandem mass spectrometry; Mass spectrometry; Peptide mass fingerprinting; Proteomics; Biochemistry","score_opus":0.03762481897697188,"score_gpt":0.3933573761562176,"score_spread":0.3557325571792457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W100382268","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038634546,0.000055253095,0.9593326,0.00018180453,0.000010692236,0.000410591,0.0000079832525,0.000016572603,0.0013499804],"genre_scores_gemma":[0.107253574,0.0000030700305,0.89162177,0.000020299749,0.000004522137,0.0010421077,0.000017890181,0.000008749036,0.000027995085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992716,0.00007120593,0.00033394026,0.00014946943,0.00004538681,0.0001284542],"domain_scores_gemma":[0.9991045,0.00036699275,0.00017779379,0.0002603677,0.00007643437,0.00001390513],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060787325,0.00007734084,0.00016457163,0.0000657497,0.000028482167,0.0000030913877,0.00020942085,0.00011238645,0.0002508804],"category_scores_gemma":[0.0002246921,0.0000579946,0.0000595031,0.00014553597,0.00007049669,0.000007464663,0.000033763918,0.00007529172,8.172304e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000067285437,0.000045926456,0.00012067426,0.000062716266,0.000017833061,4.5235772e-8,0.000030303465,0.000018282268,0.93222505,0.03882697,0.000008463996,0.028637018],"study_design_scores_gemma":[0.00018082031,0.000027857714,0.00012337392,0.000012658403,0.000007930333,2.76767e-7,0.000033867505,0.0054902444,0.97767633,0.011873944,0.004510636,0.00006203944],"about_ca_topic_score_codex":0.000044349206,"about_ca_topic_score_gemma":0.000008456882,"teacher_disagreement_score":0.06861903,"about_ca_system_score_codex":0.000023795015,"about_ca_system_score_gemma":0.00005012408,"threshold_uncertainty_score":0.27469644},"labels":[],"label_agreement":null},{"id":"W10114010","doi":"10.1007/978-1-4939-2214-7_9","title":"Biochemical Characterization of G4 Quadruplex Telomerase RNA Unwinding by the RNA Helicase RHAU","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"RNA; RNA Helicase A; Helicase; DNA; G-quadruplex; Telomere; Primase; Nucleic acid structure; Chemistry; Molecular biology; Biology; Cell biology; Biochemistry; Reverse transcriptase; Gene","score_opus":0.010078029157299577,"score_gpt":0.33087728344640255,"score_spread":0.320799254289103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W10114010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6939803,0.0002902998,0.3047371,0.00021150497,0.000100481855,0.00011055482,0.000028525355,0.000009279307,0.00053196616],"genre_scores_gemma":[0.92609483,0.00011674773,0.07191716,0.00086062285,0.0001498672,0.000041028,0.00062064256,0.000042713138,0.000156363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979961,0.0006591052,0.0004256164,0.0004876,0.000087354674,0.00034420972],"domain_scores_gemma":[0.998986,0.00007628229,0.00020230276,0.0005974415,0.00005843534,0.00007950829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009777256,0.00023081856,0.00030332222,0.000055654324,0.000052848514,0.000010937902,0.00043232512,0.00039792273,0.00003084986],"category_scores_gemma":[0.0006161278,0.00018633752,0.0001323585,0.00020194428,0.0002990156,0.0000027973424,0.0002074688,0.00020510542,0.0000028622803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004939922,0.00006195131,0.00032427712,0.000022122145,0.000035178382,0.0000018763435,0.000024549143,0.0000021163303,0.98371863,0.00021161312,0.00015089904,0.015397376],"study_design_scores_gemma":[0.00043828733,0.00012291608,0.0000866352,0.000012595645,0.000018898167,0.000017032009,0.000022226242,0.00016629774,0.98188204,0.00026414637,0.016758887,0.00021004758],"about_ca_topic_score_codex":0.000014394456,"about_ca_topic_score_gemma":6.7219503e-7,"teacher_disagreement_score":0.23281993,"about_ca_system_score_codex":0.00001693933,"about_ca_system_score_gemma":0.000031892487,"threshold_uncertainty_score":0.75986236},"labels":[],"label_agreement":null},{"id":"W1019350082","doi":"10.1007/978-1-4939-2806-4_28","title":"Applications of CPPs in Genome Modulation of Plants","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Transfection; Cell biology; Internalization; Cell; Pinocytosis; Plant cell; Biology; Chemistry; Biochemistry; Gene; Endocytosis","score_opus":0.03229717104336453,"score_gpt":0.3849260446456099,"score_spread":0.3526288736022454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1019350082","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50174063,0.0007532943,0.4968584,0.000012477727,0.0000311068,0.00012184046,0.000010010238,0.0000014223648,0.00047082631],"genre_scores_gemma":[0.8255475,0.00008220106,0.17413315,0.000045995734,0.000018037554,0.000039789844,0.000098783625,0.000007602121,0.00002695148],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998932,0.0003407881,0.00032792622,0.00022400157,0.00004198868,0.00013328555],"domain_scores_gemma":[0.9995064,0.000018148367,0.00011082529,0.00028226542,0.00005156592,0.000030752504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006270859,0.00008546173,0.00020033769,0.00015363736,0.000004420762,0.0000012122888,0.00018557736,0.00017972778,0.0000035954906],"category_scores_gemma":[0.00010649526,0.00008581859,0.00004598617,0.00013303208,0.00008075551,0.0000015931847,0.00008237481,0.00006172676,0.0000013376181],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005187812,0.000053664364,0.007977022,0.000007704226,0.000013637032,0.0000010240516,0.00005409366,0.00065504794,0.98045266,0.00020019375,0.0000049584496,0.01052809],"study_design_scores_gemma":[0.0005328125,0.00030602256,0.0053841956,0.000009316989,0.0000045928427,0.0000050073377,0.000108119195,0.0002741861,0.9844103,0.0063991565,0.0024461742,0.000120105906],"about_ca_topic_score_codex":0.00007835797,"about_ca_topic_score_gemma":0.00003332904,"teacher_disagreement_score":0.32380685,"about_ca_system_score_codex":0.0000114536415,"about_ca_system_score_gemma":0.000053768494,"threshold_uncertainty_score":0.34995803},"labels":[],"label_agreement":null},{"id":"W102136735","doi":"10.1007/978-1-60761-454-8_18","title":"Is Permethylation Strategy Always Applicable to Protein N-Glycosylation Study?: A Case Study on the O-Acetylation of Sialic Acid in Fish Serum Glycans","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Marine Biosciences; National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Acetylation; Sialic acid; Glycan; Glycoproteomics; Glycosylation; Biochemistry; Chemistry; Fish <Actinopterygii>; Function (biology); Hexosamines; N-linked glycosylation; Capillary electrophoresis; Glycoprotein; Biology; Cell biology; Chromatography; Gene","score_opus":0.050496886853434064,"score_gpt":0.43259355458837706,"score_spread":0.382096667734943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W102136735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8851656,0.0000347203,0.10966389,0.00073656556,0.000026002293,0.0039911354,0.00001568274,0.0000111161025,0.00035533166],"genre_scores_gemma":[0.9824341,0.0000037596567,0.016499167,0.0004378216,0.000037747734,0.00047767916,0.000028358261,0.000023400664,0.000057943882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99543405,0.0025657464,0.0006294145,0.00072072714,0.00024376351,0.00040628473],"domain_scores_gemma":[0.9987873,0.00006381883,0.00016427453,0.000752856,0.00015256145,0.00007918674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028045485,0.00026217225,0.00036038485,0.00036912135,0.00009113336,0.000030297802,0.00031209897,0.00026573538,0.000045577406],"category_scores_gemma":[0.0005299481,0.00022603036,0.000086085616,0.0009039745,0.000056224624,0.000008440006,0.00011268551,0.00031376554,0.0000047669814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002868856,0.000924727,0.009969104,0.00000773806,0.00003287371,0.00005543935,0.0008714454,0.00094901596,0.9646227,0.00033393162,0.000007651317,0.021938516],"study_design_scores_gemma":[0.0020054164,0.0072571486,0.035499193,0.000020916976,0.00001613621,0.000024607496,0.0026645234,0.000991696,0.94942385,0.001397149,0.00036387637,0.00033547252],"about_ca_topic_score_codex":0.00047641018,"about_ca_topic_score_gemma":0.0010443811,"teacher_disagreement_score":0.09726856,"about_ca_system_score_codex":0.00006256613,"about_ca_system_score_gemma":0.000092136805,"threshold_uncertainty_score":0.92172503},"labels":[],"label_agreement":null},{"id":"W1029505879","doi":"10.1007/978-1-4939-2590-2","title":"Stem Cell Renewal and Cell-Cell Communication","year":2015,"lang":"en","type":"editorial","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Cell; Cell biology; Biology; Genetics","score_opus":0.02147439739182157,"score_gpt":0.381844145050104,"score_spread":0.36036974765828245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1029505879","genre_codex":"editorial","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021460822,0.20414904,0.28620076,0.00031250343,0.428528,0.0034640098,0.0008058074,0.00012457221,0.054954484],"genre_scores_gemma":[0.003002595,0.020933658,0.8321667,0.00026740093,0.11564716,0.0003834583,0.008294378,0.0005067926,0.01879789],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9921571,0.0048718858,0.0006548358,0.0012399291,0.0003528465,0.0007234127],"domain_scores_gemma":[0.99698365,0.0004044017,0.00035257524,0.0016673442,0.00035784813,0.00023416487],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.003825372,0.00056258537,0.0007322657,0.0002803995,0.00007556001,0.00005171988,0.0012048744,0.002770781,0.000011622018],"category_scores_gemma":[0.00030976298,0.00057629915,0.0001648198,0.0002215968,0.00035460727,0.0000035060716,0.0015956407,0.0012059399,0.000020343941],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011792586,0.00011720477,0.000051755673,0.00018712458,0.000030598094,0.00002101301,0.00004362139,0.000018214905,0.80646497,0.000010021496,0.19099899,0.0019385434],"study_design_scores_gemma":[0.0010971448,0.00037786734,0.0000011230949,0.000022488315,0.00003368073,0.0000035785422,0.000044737273,0.000033472585,0.4252861,0.00055408245,0.57211393,0.00043180826],"about_ca_topic_score_codex":0.00021290485,"about_ca_topic_score_gemma":0.000063867235,"teacher_disagreement_score":0.5459659,"about_ca_system_score_codex":0.00010722645,"about_ca_system_score_gemma":0.00056673674,"threshold_uncertainty_score":0.99966884},"labels":[],"label_agreement":null},{"id":"W103321132","doi":"10.1007/978-1-62703-083-0_3","title":"A User-Friendly Computational Workflow for the Analysis of MicroRNA Deep Sequencing Data","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Workflow; Identification (biology); microRNA; Deep sequencing; Computer science; Computational biology; DNA sequencing; Small RNA; Data mining; Biology; Database; Genome; Genetics; Gene","score_opus":0.03925841771381761,"score_gpt":0.3978316693136244,"score_spread":0.3585732515998068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W103321132","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.082286425,0.0042810836,0.91280484,0.00007409239,0.00012624486,0.00028557982,0.00011343884,0.0000047781955,0.000023540539],"genre_scores_gemma":[0.23595859,0.000021893647,0.7624974,0.00016071103,0.00006480864,0.000038321814,0.0012334882,0.000016007147,0.000008763262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998277,0.00061569095,0.00036486832,0.0003722658,0.000065992535,0.00030416794],"domain_scores_gemma":[0.99853706,0.0002847903,0.00018633534,0.00084358064,0.00009670626,0.00005150708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017954801,0.00014479982,0.00026974143,0.00016322917,0.000049086782,0.000007947385,0.00054261164,0.00018025973,0.00001679047],"category_scores_gemma":[0.0006556129,0.000118701886,0.00017056084,0.00047081703,0.00015387431,0.0000054541356,0.00030461448,0.000072761504,5.914252e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057364872,0.00004210004,0.007057979,0.00001439546,0.00082359073,3.6216144e-7,0.000038076894,0.012235465,0.9688513,0.00093793607,0.00007178763,0.009869591],"study_design_scores_gemma":[0.0015535083,0.0002004331,0.03700649,0.00002347164,0.002547433,0.000020227486,0.0002158795,0.13973986,0.7808593,0.0026384555,0.034467902,0.0007270321],"about_ca_topic_score_codex":0.00002252281,"about_ca_topic_score_gemma":0.000028363633,"teacher_disagreement_score":0.18799204,"about_ca_system_score_codex":0.000030468518,"about_ca_system_score_gemma":0.000072056275,"threshold_uncertainty_score":0.48405224},"labels":[],"label_agreement":null},{"id":"W103409235","doi":"10.1007/978-1-61779-507-7_5","title":"Detection and Characterization of Copy Number Variation in Autism Spectrum Disorder","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Copy-number variation; Autism; Biology; Candidate gene; Genetics; Penetrance; Structural variation; Autism spectrum disorder; Genomics; Genome-wide association study; Comparative genomic hybridization; Missing heritability problem; Genome; Computational biology; Gene; Phenotype; Medicine; Single-nucleotide polymorphism; Psychiatry; Genotype","score_opus":0.017410645849667134,"score_gpt":0.3364076880642975,"score_spread":0.3189970422146304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W103409235","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007762078,0.5046006,0.48644504,0.0000122002675,0.0002989717,0.00057204196,0.000054404085,0.0000072381295,0.00024744836],"genre_scores_gemma":[0.003916998,0.9517749,0.04364264,0.000018431114,0.000041521438,0.00013194769,0.00035841242,0.00003963318,0.000075517906],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975819,0.0011337759,0.00060670066,0.00043581158,0.000030262394,0.00021153998],"domain_scores_gemma":[0.9993088,0.000027523434,0.00033810874,0.00028188177,0.000016610535,0.000027032087],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00059759826,0.00025535715,0.00068848266,0.00019161645,0.00002165239,0.000007512636,0.00014064505,0.00064271013,0.000036540594],"category_scores_gemma":[0.000063329964,0.0002464495,0.00012021365,0.00021333963,0.000074164665,0.0000038260246,0.00013060421,0.00017031614,0.000002336699],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040757404,0.00016145088,0.0020881125,0.002176779,0.00018448533,0.0000050059307,0.00022120828,0.0000026884902,0.32498118,0.012225648,3.9146516e-7,0.6579123],"study_design_scores_gemma":[0.0015610626,0.0007339387,0.008243639,0.0014221265,0.0005020808,0.00023125275,0.000038953403,0.0000602536,0.04994881,0.014042063,0.9215528,0.0016630507],"about_ca_topic_score_codex":0.00016030039,"about_ca_topic_score_gemma":0.000067946654,"teacher_disagreement_score":0.92155236,"about_ca_system_score_codex":0.00003141204,"about_ca_system_score_gemma":0.00007894519,"threshold_uncertainty_score":0.99999875},"labels":[],"label_agreement":null},{"id":"W103571188","doi":"10.1007/978-1-59745-060-7_15","title":"Regeneration of Skin and Cornea by Tissue Engineering","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Regeneration (biology); Cornea; Tissue engineering; Biology; Biomedical engineering; Engineering; Cell biology; Neuroscience","score_opus":0.021102295682874656,"score_gpt":0.3629616050334683,"score_spread":0.34185930935059367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W103571188","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5566642,0.0014970249,0.44153985,0.000050831466,0.000044858087,0.00008147159,0.000002186941,0.0000069670514,0.000112592745],"genre_scores_gemma":[0.5338009,0.00017411158,0.46580055,0.00007104576,0.000010902012,0.000011522268,0.000030867464,0.000007709908,0.00009236982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994843,0.00013758361,0.00013582583,0.00012940397,0.000023842367,0.00008904469],"domain_scores_gemma":[0.9997516,0.00007941477,0.000027327002,0.00009745685,0.0000138989735,0.000030300018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019356905,0.0000631972,0.00019550016,0.00006165389,0.000009792309,5.760835e-7,0.000016342732,0.00007864868,0.000012300282],"category_scores_gemma":[0.00014264572,0.000056077297,0.000020355063,0.00009359694,0.00004004945,0.00000707715,0.000015795531,0.000054676588,6.184892e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000219106,0.000040406987,0.017062943,0.000011535947,0.000020954927,0.000056478275,0.000037951213,0.000011643023,0.9483401,0.00022787658,0.000017851205,0.034150314],"study_design_scores_gemma":[0.0004193297,0.00017429442,0.0074722674,0.000010572979,0.000014391073,0.00011099741,0.0000019791225,0.00041028447,0.98880744,0.00014699143,0.0023820647,0.000049403523],"about_ca_topic_score_codex":0.000041878393,"about_ca_topic_score_gemma":9.183081e-7,"teacher_disagreement_score":0.04046729,"about_ca_system_score_codex":0.000012002956,"about_ca_system_score_gemma":0.0000108205595,"threshold_uncertainty_score":0.22867657},"labels":[],"label_agreement":null},{"id":"W103682420","doi":"10.1007/978-1-59745-418-6_10","title":"Retroviral/Lentiviral Transduction and Transformation Assay","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"Cancer Research UK; Wellcome Trust","keywords":"Transduction (biophysics); Haematopoiesis; Biology; Transformation (genetics); Fusion gene; Stem cell; Viral vector; Cell biology; Cancer research; Gene; Genetics; Recombinant DNA","score_opus":0.02106451784461824,"score_gpt":0.39461258742440425,"score_spread":0.37354806957978604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W103682420","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37228248,0.0011005633,0.6248285,0.000680604,0.00007904619,0.00020929215,0.00000428942,0.000012947747,0.0008022302],"genre_scores_gemma":[0.80036,0.00045112032,0.19798991,0.0007371852,0.000100538215,0.000031913816,0.00017506465,0.00002453716,0.00012970562],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975337,0.001396412,0.00025673638,0.00040982582,0.00007811451,0.00032521336],"domain_scores_gemma":[0.99955064,0.00002138808,0.000043455435,0.00028816995,0.000038737853,0.000057626894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017519089,0.00016603322,0.00019136428,0.00015565014,0.00004686604,0.000015585594,0.00015597712,0.00028124818,0.000016821612],"category_scores_gemma":[0.00012766305,0.00016394483,0.00007946006,0.00018233081,0.000117760705,0.000006254737,0.000020227815,0.00019172608,0.000002205302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040856842,0.00003470099,0.00014730472,0.000004946571,0.000015367603,0.000007049096,0.000052634252,0.000022041024,0.84372735,0.0005117866,0.000010668999,0.1550576],"study_design_scores_gemma":[0.0008185843,0.002538458,0.0005317923,0.0000050285457,0.000008710655,0.000046940295,0.000027233882,0.0001976812,0.9864471,0.005433056,0.0037492758,0.0001961152],"about_ca_topic_score_codex":0.000007898126,"about_ca_topic_score_gemma":0.000023838342,"teacher_disagreement_score":0.42807755,"about_ca_system_score_codex":0.000019573794,"about_ca_system_score_gemma":0.000034283312,"threshold_uncertainty_score":0.6685476},"labels":[],"label_agreement":null},{"id":"W103747493","doi":"10.1007/978-1-4939-2428-8_7","title":"Longitudinal Studies 4: Matching Strategies to Evaluate Risk","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre; University of Calgary","funders":"","keywords":"Propensity score matching; Confounding; Observational study; Matching (statistics); Psychological intervention; Contrast (vision); Outcome (game theory); Medicine; Econometrics; Statistics; Computer science; Mathematics; Artificial intelligence","score_opus":0.40862711632687365,"score_gpt":0.6147512186106135,"score_spread":0.2061241022837399,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W103747493","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05636031,0.0013381712,0.940167,0.00012867751,0.00016877678,0.00031098563,0.0000034466862,0.00018505483,0.0013375551],"genre_scores_gemma":[0.024157947,0.00009589207,0.9754071,0.000118270415,0.000028690773,0.00013355992,0.0000015373209,0.000028531602,0.000028462538],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99651337,0.002167982,0.0004144316,0.0004034006,0.0001239975,0.00037680197],"domain_scores_gemma":[0.9981601,0.00093967473,0.00015162157,0.0004474516,0.00020738106,0.0000937352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0050732745,0.00023035219,0.0005176988,0.00020956187,0.000038017086,0.000019783756,0.00028697422,0.00014498655,0.000009582621],"category_scores_gemma":[0.006396609,0.00019241875,0.000060290175,0.0002919732,0.00013668755,0.00009025038,0.00030828518,0.00032131094,0.000012366445],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008944675,0.00010123228,0.0032172103,0.000085145046,0.00019280994,0.00010484727,0.004311669,0.0011118061,0.19929236,0.74157715,0.00019334006,0.04972301],"study_design_scores_gemma":[0.0001891644,0.00025403514,0.000064372514,0.000034392397,0.00003182232,0.000010918644,0.0014748905,0.000059546066,0.04388899,0.9533667,0.00041457955,0.0002105842],"about_ca_topic_score_codex":0.00004917117,"about_ca_topic_score_gemma":0.00007735128,"teacher_disagreement_score":0.21178958,"about_ca_system_score_codex":0.00014155474,"about_ca_system_score_gemma":0.00006994805,"threshold_uncertainty_score":0.78466094},"labels":[],"label_agreement":null},{"id":"W104113135","doi":"10.1007/978-1-62703-520-0_19","title":"Isolating, Culturing, and Polarizing Primary Human Adult and Fetal Microglia","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":89,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"","keywords":"Microglia; Primary (astronomy); Fetus; Primary culture; Cell biology; Neuroscience; Biology; Immunology; Pregnancy; Cell culture; Genetics; Physics; Inflammation","score_opus":0.024619749716605976,"score_gpt":0.3481530244058608,"score_spread":0.32353327468925486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W104113135","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80058396,0.000074776566,0.19764568,0.00031267584,0.000117519354,0.0002799764,0.0000018868888,0.00005611128,0.0009274062],"genre_scores_gemma":[0.17455907,0.000072832256,0.8185413,0.00636116,0.000040845916,0.000052529445,0.000005325624,0.000034373807,0.0003325384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978715,0.0010466516,0.00027689867,0.0005070002,0.000058645528,0.00023931106],"domain_scores_gemma":[0.9995074,0.00011909082,0.000097520686,0.0001753981,0.000026941461,0.00007359422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028583253,0.00015752236,0.00018893518,0.0001321639,0.00014406454,0.00007467772,0.00011807546,0.0001093206,0.000034434284],"category_scores_gemma":[0.000490399,0.00014542145,0.000028803812,0.000117446805,0.00013277648,0.000098528144,0.0001666415,0.00022378644,0.000008073418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000022760603,0.000011365642,0.000497614,0.000011116052,0.0000011853991,0.000009429285,0.0000870081,0.0000010295439,0.97538316,0.018351886,0.0000063410257,0.0056376145],"study_design_scores_gemma":[0.00035019,0.00008400084,0.0007864143,0.00000654827,0.0000033987728,0.000068131085,0.000012619162,0.00075858296,0.98983884,0.0076564224,0.00028359346,0.00015128554],"about_ca_topic_score_codex":0.000026818503,"about_ca_topic_score_gemma":0.0000039214606,"teacher_disagreement_score":0.6260249,"about_ca_system_score_codex":0.000012614781,"about_ca_system_score_gemma":0.000009070666,"threshold_uncertainty_score":0.5930115},"labels":[],"label_agreement":null},{"id":"W105063633","doi":"10.1007/978-1-60327-058-8_14","title":"High Throughput Production of Recombinant Human Proteins for Crystallography","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"","keywords":"Recombinant DNA; Cloning (programming); Fusion protein; Computational biology; Expression vector; Protein engineering; Affinity chromatography; Biology; Chemistry; Gene; Biochemistry; Computer science; Enzyme","score_opus":0.025065226573572286,"score_gpt":0.37642023314041306,"score_spread":0.35135500656684077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W105063633","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3921951,0.001080307,0.60522634,0.000052011546,0.00077363104,0.0005669341,0.000008598837,0.000016386895,0.00008066954],"genre_scores_gemma":[0.53600115,0.00022662796,0.46286935,0.00008562362,0.00013012346,0.00034377706,0.00014159211,0.000028544648,0.0001732508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826175,0.000517717,0.00036376907,0.0005358999,0.00005461153,0.00026627703],"domain_scores_gemma":[0.9992918,0.00002929845,0.00012440931,0.00040528565,0.00010471994,0.000044527016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005122078,0.000177051,0.00027440744,0.00014993374,0.00011101868,0.000004739544,0.00017157229,0.0002546923,0.000012607435],"category_scores_gemma":[0.00030254308,0.00016135743,0.00022802848,0.00020472532,0.00024290968,0.0000040155714,0.00007729032,0.00009184318,2.3798927e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008014265,0.00016500543,0.002273795,0.000056717083,0.00005812446,0.000003886735,0.000024578943,0.00012393491,0.9923899,0.002045074,0.00058582256,0.0021930076],"study_design_scores_gemma":[0.00051813514,0.0012592569,0.0010969625,0.000029556455,0.000014009448,0.000026439577,0.000008017583,0.000013941322,0.97521204,0.010550721,0.011058715,0.00021221716],"about_ca_topic_score_codex":0.00011403184,"about_ca_topic_score_gemma":0.000014367053,"teacher_disagreement_score":0.143806,"about_ca_system_score_codex":0.00001218868,"about_ca_system_score_gemma":0.00006300504,"threshold_uncertainty_score":0.6579965},"labels":[],"label_agreement":null},{"id":"W105325951","doi":"10.1007/978-1-4939-2291-8_5","title":"Drawing and Editing the Secondary Structure(s) of RNA","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Scripting language; Computer science; Python (programming language); Visualization; RNA; Nucleic acid structure; World Wide Web; Programming language; Data mining; Biology; Genetics","score_opus":0.009970840895505977,"score_gpt":0.3200194255030062,"score_spread":0.31004858460750023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W105325951","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3487466,0.0009998037,0.6490804,0.00012407008,0.00017385249,0.000114657465,0.000004794343,0.0000038096139,0.0007520397],"genre_scores_gemma":[0.64524114,0.00002684197,0.35423565,0.00034744473,0.000103949584,0.000007490004,0.000008681272,0.00001363006,0.0000151587465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980252,0.0012033213,0.00023567646,0.00029037066,0.000043886586,0.0002015482],"domain_scores_gemma":[0.9993827,0.0001189472,0.00011166105,0.0003273831,0.00002873319,0.00003061675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011611425,0.00012918396,0.0002047179,0.000049536535,0.000049597955,0.000008178163,0.00021662422,0.00020482267,0.000019559016],"category_scores_gemma":[0.00069867406,0.00009484345,0.00005695311,0.00007165374,0.00016511792,0.0000015168351,0.00016404859,0.00012941624,2.8821233e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010746598,0.0000039581537,0.00033257905,0.000012221605,0.000017720418,5.622396e-7,0.000032684417,0.0000070720503,0.88148844,0.0037255832,0.000005216485,0.1143632],"study_design_scores_gemma":[0.00019819994,0.00013651855,0.0002614522,0.000009704154,0.000009166422,0.00001320548,0.000042476342,0.000056055356,0.9728579,0.019475725,0.0068380167,0.000101568105],"about_ca_topic_score_codex":0.00001635319,"about_ca_topic_score_gemma":0.000008497332,"teacher_disagreement_score":0.29649457,"about_ca_system_score_codex":0.0000032561431,"about_ca_system_score_gemma":0.000020604197,"threshold_uncertainty_score":0.38676038},"labels":[],"label_agreement":null},{"id":"W105731480","doi":"10.1007/978-1-60327-194-3_14","title":"Computational Approaches to Metabolomics","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":87,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Institute for Nanotechnology; University of Alberta","funders":"Genome Alberta; Genome Canada","keywords":"Metabolomics; Computer science; Field (mathematics); Data science; Bioinformatics; Biology; Mathematics","score_opus":0.12615176133972641,"score_gpt":0.42596350768185404,"score_spread":0.2998117463421276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W105731480","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000048398792,0.5903307,0.408097,0.00005485133,0.00019451448,0.0005061342,0.000039072107,0.000010116903,0.0007627778],"genre_scores_gemma":[7.702525e-7,0.5194959,0.47951907,0.00025685775,0.000106224026,0.00012824462,0.00034371245,0.000041730113,0.0001074686],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99550986,0.0017180849,0.0008542628,0.0012071239,0.00010285283,0.00060779805],"domain_scores_gemma":[0.9987108,0.00011813703,0.0002799592,0.00070548867,0.00004637751,0.0001392004],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015421426,0.0006681906,0.002148724,0.0005666393,0.00005954184,0.000027280916,0.00068129605,0.00080102304,0.00001267644],"category_scores_gemma":[0.0005667206,0.0005869403,0.0006200751,0.0006436623,0.000118374555,0.0000014943035,0.00050321757,0.00041522336,0.00001815361],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001388678,0.00008418802,0.0000043512073,0.0003808316,0.00036108802,0.000009284289,0.000010095333,0.00014625918,0.0023096283,0.015884057,0.00018594672,0.9806104],"study_design_scores_gemma":[0.00019883452,0.00023426002,0.0000035131281,0.00014624247,0.00022821806,0.00003584056,0.0000060877283,0.00001581373,0.00068484776,0.0055986405,0.99224025,0.0006074248],"about_ca_topic_score_codex":0.000005376324,"about_ca_topic_score_gemma":0.000005422725,"teacher_disagreement_score":0.99205434,"about_ca_system_score_codex":0.00005296951,"about_ca_system_score_gemma":0.00020199614,"threshold_uncertainty_score":0.9996582},"labels":[],"label_agreement":null},{"id":"W106150243","doi":"10.1007/978-1-59745-522-0_18","title":"Methylation SNaPshot: A Method for the Quantification of Site-Specific DNA Methylation Levels","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"DNA methylation; Bisulfite sequencing; Illumina Methylation Assay; Computational biology; Methylated DNA immunoprecipitation; Epigenetics; Snapshot (computer storage); Methylation; Biology; DNA; Molecular biology; Genetics; Gene; Computer science; Gene expression; Database","score_opus":0.07293799493956687,"score_gpt":0.4089213925648412,"score_spread":0.33598339762527435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W106150243","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.070611246,0.0066147996,0.9213233,0.00021576861,0.0002768111,0.0007088123,0.00003799852,0.000008880649,0.00020238239],"genre_scores_gemma":[0.26052368,0.00068536797,0.73800117,0.00007607028,0.00009752642,0.0001525583,0.00037004525,0.000033181772,0.000060392184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996641,0.0016405652,0.0006932942,0.00059598184,0.00012663481,0.0003025294],"domain_scores_gemma":[0.99789596,0.0007314226,0.00036842353,0.0006817436,0.00027596968,0.0000464991],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003770942,0.00023231475,0.00035295147,0.00019083625,0.0001373978,0.000009949667,0.00029388207,0.00039616093,0.000026631033],"category_scores_gemma":[0.0010266344,0.00019371277,0.00022870829,0.00036196984,0.00018785776,0.0000050569297,0.000085351974,0.00014340322,0.0000015285541],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094041054,0.000047753543,0.00077372574,0.000014493406,0.000046993107,5.0946943e-7,0.00013799104,0.0024495139,0.9505648,0.0032393958,0.000028199329,0.042602595],"study_design_scores_gemma":[0.0006024099,0.00024796693,0.0041696997,0.0000054355173,0.000032800737,0.0000040749464,0.0000316187,0.00433194,0.961477,0.0065433374,0.022342024,0.00021168115],"about_ca_topic_score_codex":0.000037253794,"about_ca_topic_score_gemma":0.000021545213,"teacher_disagreement_score":0.18991244,"about_ca_system_score_codex":0.000026510299,"about_ca_system_score_gemma":0.000072313946,"threshold_uncertainty_score":0.78993773},"labels":[],"label_agreement":null},{"id":"W106919988","doi":"10.1007/978-1-62703-339-8_4","title":"Specimen Requirements for the Haemostasis Laboratory","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Alberta Hospital; Alberta Hospital Edmonton","funders":"Canadian Institutes of Health Research","keywords":"Sample (material); Computer science; Quality (philosophy); Risk analysis (engineering); Reliability engineering; Operations management; Engineering; Medicine; Chemistry; Chromatography","score_opus":0.07873424439169172,"score_gpt":0.44470089426543535,"score_spread":0.3659666498737436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W106919988","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009677321,0.0006301609,0.9835401,0.0037335563,0.00032954395,0.0010441879,0.0000050436797,0.000028864728,0.0010112212],"genre_scores_gemma":[0.034097947,0.000030501966,0.9599583,0.0053083063,0.00006021269,0.00032577803,0.000014757272,0.000021640513,0.00018252902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998898,0.00037988284,0.00022311254,0.0002204709,0.000059653597,0.00021885519],"domain_scores_gemma":[0.9992205,0.00022965833,0.000057806694,0.0003423374,0.000100094025,0.00004963429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009240185,0.00010334596,0.00023152192,0.00007689373,0.0000445756,0.000009432963,0.00011411484,0.00012414444,0.0003494052],"category_scores_gemma":[0.00036029215,0.00006980712,0.000070458205,0.00019417724,0.00006965085,0.000019741246,0.000048815495,0.00010761945,0.000026127384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001639475,0.000055025193,0.0009572446,0.000011694496,0.00008954097,0.0000020466875,0.00004616852,0.000001413998,0.90879995,0.019509794,0.0003517628,0.07015894],"study_design_scores_gemma":[0.0016510393,0.00031768502,0.0047789547,0.000019437355,0.00010208141,0.0000054804905,0.00012989715,0.0009376477,0.91613,0.044492733,0.031286426,0.00014859877],"about_ca_topic_score_codex":0.000027355107,"about_ca_topic_score_gemma":0.0000021459437,"teacher_disagreement_score":0.07001035,"about_ca_system_score_codex":0.000030080837,"about_ca_system_score_gemma":0.000037036407,"threshold_uncertainty_score":0.38257417},"labels":[],"label_agreement":null},{"id":"W108200661","doi":"10.1007/978-1-60327-409-8_13","title":"Ultrasound Imaging of Apoptosis: Spectroscopic Detection of DNA-Damage Effects at High and Low Frequencies","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; Toronto Metropolitan University; Princess Margaret Cancer Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Ultrasound; Programmed cell death; Apoptosis; In vivo; Ex vivo; Cell; Medicine; Pathology; Biomedical engineering; Radiology; Biology","score_opus":0.004457870882602751,"score_gpt":0.27364389603380224,"score_spread":0.2691860251511995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W108200661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69959754,0.00027149287,0.29970634,0.000007690699,0.00012544714,0.00009669965,0.0000031864938,0.00002634913,0.00016523492],"genre_scores_gemma":[0.7830227,0.0000401134,0.21686327,0.000012779987,0.000013109843,0.000027293165,0.0000036211413,0.000013446205,0.0000036779234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993536,0.00012709586,0.00018718604,0.0001505495,0.00003125341,0.00015035011],"domain_scores_gemma":[0.9993478,0.00035110026,0.000043217588,0.00021257694,0.000019312436,0.00002598437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025258082,0.0001069704,0.00022166797,0.000112844275,0.000022662683,0.000004179398,0.00009312345,0.000103737555,0.0000129202745],"category_scores_gemma":[0.00016317207,0.0001040343,0.000035586196,0.000146123,0.00016871901,0.000020377804,0.00002170183,0.0001604094,9.366521e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000019721301,0.0000114181885,0.004319232,0.000077180965,0.000016771528,4.0687758e-7,0.00007914076,0.000028550752,0.99179566,0.0012697049,5.212045e-7,0.0023994169],"study_design_scores_gemma":[0.00017789214,0.000024740291,0.011221754,0.000012202469,0.000017460414,0.000008373302,0.0000139844515,0.00024205765,0.98270047,0.005445564,0.000047434085,0.00008807438],"about_ca_topic_score_codex":0.000058311085,"about_ca_topic_score_gemma":0.00004167564,"teacher_disagreement_score":0.08342512,"about_ca_system_score_codex":0.00001841567,"about_ca_system_score_gemma":0.0000058066894,"threshold_uncertainty_score":0.42423955},"labels":[],"label_agreement":null},{"id":"W109014649","doi":"10.1007/978-1-4939-0685-7_30","title":"Analysis of Protein Structure by Cross-Linking Combined with Mass Spectrometry","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Mass spectrometry; Orbitrap; Chemistry; Protein mass spectrometry; Chromatography; Analytical Chemistry (journal); Tandem mass spectrometry","score_opus":0.007717594220507397,"score_gpt":0.3488004278321461,"score_spread":0.3410828336116387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W109014649","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24673359,0.00006209717,0.74849635,0.000045894678,0.0000052672112,0.00009807694,0.000040378178,0.000046622732,0.0044717137],"genre_scores_gemma":[0.45954037,0.0000022735044,0.5402151,0.000026457956,0.0000066714456,0.00003489091,0.00009436077,0.000012997665,0.000066880275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986146,0.00022899394,0.00035348546,0.00043158932,0.00009749566,0.00027383413],"domain_scores_gemma":[0.998918,0.00012772747,0.0002278698,0.0006284693,0.000053198,0.000044739223],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005256471,0.00018290477,0.00052861153,0.00035794318,0.00003440485,0.00001570284,0.0003678868,0.00026213765,0.0010263966],"category_scores_gemma":[0.00012172362,0.00015435262,0.00011783302,0.0014835234,0.00016446876,0.000013592045,0.00006457305,0.00030502965,2.809149e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002770466,0.00003748249,0.029938541,0.000034203884,0.00022593321,0.0000011841901,0.0000074430845,0.000040699055,0.9380486,0.03022634,0.0000015537039,0.0014102848],"study_design_scores_gemma":[0.0002968966,0.00012160726,0.0003750619,0.000011778689,0.00012351098,0.0000012767908,0.000006153009,0.0015313326,0.9598185,0.03684623,0.00069412385,0.0001735707],"about_ca_topic_score_codex":0.00004097606,"about_ca_topic_score_gemma":0.000008273103,"teacher_disagreement_score":0.21280679,"about_ca_system_score_codex":0.000047804966,"about_ca_system_score_gemma":0.000014232112,"threshold_uncertainty_score":0.9998868},"labels":[],"label_agreement":null},{"id":"W110986921","doi":"10.1007/978-1-60761-971-0_5","title":"Liquid Chromatography/Mass Spectrometry for the Detection and Quantification of N-Acyl-l-Homoserine Lactones and 4-Hydroxy-2-Alkylquinolines","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chromatography; Mass spectrometry; Chemistry; Homoserine; Liquid chromatography–mass spectrometry; Biochemistry; Quorum sensing","score_opus":0.017793077824022282,"score_gpt":0.3355993607804317,"score_spread":0.3178062829564094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W110986921","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7425984,0.00089803414,0.25608498,0.00009683227,0.00008519909,0.0000807591,0.000012327972,0.000018240276,0.00012520414],"genre_scores_gemma":[0.8765993,0.00022462773,0.1230084,0.000013431625,0.000056503763,0.00006244146,0.000008597923,0.000015233588,0.00001143406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913794,0.00008086825,0.0002725766,0.0003012341,0.000038854858,0.00016852836],"domain_scores_gemma":[0.9988239,0.00063736044,0.00013470152,0.00032634372,0.000044715453,0.000032998018],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063238124,0.00014323663,0.00025432315,0.00008271915,0.000058205394,0.00001263565,0.00013388206,0.00024547204,0.000030683554],"category_scores_gemma":[0.00058825384,0.00011341553,0.00007537588,0.00018450768,0.00030788474,0.00002138889,0.000045235985,0.00018825092,1.017459e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000095027215,0.000021247943,0.0007042876,0.00012698489,0.000041499054,8.136661e-7,0.00003810767,0.000001301744,0.98964065,0.00063899695,2.185634e-7,0.008690863],"study_design_scores_gemma":[0.00024213575,0.00004886355,0.00042850673,0.000009853434,0.000038522405,0.00002012837,0.0000822598,0.0010836702,0.9951819,0.0020611805,0.00068243366,0.00012052113],"about_ca_topic_score_codex":0.000040450086,"about_ca_topic_score_gemma":0.000026205082,"teacher_disagreement_score":0.13400091,"about_ca_system_score_codex":0.000005778659,"about_ca_system_score_gemma":0.000009964499,"threshold_uncertainty_score":0.46249512},"labels":[],"label_agreement":null},{"id":"W111351366","doi":"10.1007/978-1-59745-060-7_23","title":"Islet-Derived Progenitors as a Source of In Vitro Islet Regeneration","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research; Stem Cell Network; Canadian Diabetes Association","keywords":"Islet; Progenitor cell; Biology; Regeneration (biology); Pancreas; Transplantation; Cell biology; Endocrinology; Neogenesis; Internal medicine; Progenitor; Stem cell; Insulin; Medicine","score_opus":0.027196058640308232,"score_gpt":0.36313477162258484,"score_spread":0.3359387129822766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W111351366","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75599986,0.0005082653,0.24207285,0.00023942861,0.00009662204,0.00021976225,7.7574487e-7,0.00001658089,0.0008458371],"genre_scores_gemma":[0.41800728,0.000042211504,0.580784,0.00081934425,0.00005134822,0.00005432041,0.000031432686,0.000015037239,0.00019497985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983537,0.00081155763,0.00033278877,0.00023613234,0.00006976417,0.00019603911],"domain_scores_gemma":[0.9994513,0.00014632824,0.00008144495,0.00022512428,0.00004824446,0.000047579975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005727971,0.00011357165,0.00040006154,0.00025479164,0.000017915296,0.0000013094835,0.00005504222,0.00018014836,0.000047103287],"category_scores_gemma":[0.0012761982,0.000100466044,0.00007601597,0.00030824446,0.00014082779,0.000012395016,0.000028323722,0.00014930197,0.0000065130826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018968536,0.000090126436,0.008049318,0.000017906574,0.000024736273,0.000035147285,0.00021083423,0.00002027926,0.98415476,0.00014667929,0.000022090371,0.007038452],"study_design_scores_gemma":[0.0012726546,0.00025289474,0.00097129896,0.000016459964,0.000018240724,0.000060612154,0.000056570258,0.00062745286,0.994733,0.0006070216,0.001299614,0.00008417517],"about_ca_topic_score_codex":0.00013995693,"about_ca_topic_score_gemma":9.677425e-7,"teacher_disagreement_score":0.33871117,"about_ca_system_score_codex":0.000040664312,"about_ca_system_score_gemma":0.00008487408,"threshold_uncertainty_score":0.40968865},"labels":[],"label_agreement":null},{"id":"W112811424","doi":"10.1007/978-1-61779-027-0_1","title":"Omics Technologies, Data and Bioinformatics Principles","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ontario Institute for Cancer Research","keywords":"Omics; Proteomics; Genomics; Data science; Computer science; Bioinformatics; Computational biology; Biology; Genome; Genetics","score_opus":0.14206933106812628,"score_gpt":0.45460704204626495,"score_spread":0.31253771097813865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W112811424","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000031897175,0.7449695,0.25298458,0.000022764616,0.0002128356,0.0006394007,0.00025293216,0.00003326783,0.00088153826],"genre_scores_gemma":[2.128724e-7,0.55387354,0.4445558,0.00004608067,0.000037541427,0.000043613865,0.0013288741,0.000035522575,0.00007882857],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960855,0.0007596642,0.0013136946,0.00090900896,0.00013993366,0.0007921579],"domain_scores_gemma":[0.996736,0.00014924347,0.00045324842,0.0024269277,0.00007795769,0.00015665925],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0028943676,0.00061952247,0.0014234786,0.0004966901,0.000064587344,0.000046076344,0.0023857872,0.0019980362,0.000008410875],"category_scores_gemma":[0.002990336,0.00048561866,0.00020022276,0.00036706708,0.0009910514,0.00000621937,0.0051289666,0.0007620493,0.000017510974],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007971607,0.000040453815,0.000017358052,0.0030204041,0.00014412294,0.000007185239,0.000019436526,9.150163e-8,0.00056663965,0.00044921334,0.00012333128,0.9956038],"study_design_scores_gemma":[0.00023434544,0.0002706892,0.0000010505953,0.0005065529,0.00013109257,0.000086980195,0.00006979313,0.00027597763,0.0009964658,0.000681424,0.9961953,0.0005502923],"about_ca_topic_score_codex":0.0000145109125,"about_ca_topic_score_gemma":0.000016701766,"teacher_disagreement_score":0.996072,"about_ca_system_score_codex":0.00003783973,"about_ca_system_score_gemma":0.00045737837,"threshold_uncertainty_score":0.99975955},"labels":[],"label_agreement":null},{"id":"W113016544","doi":"10.1007/978-1-59745-154-3_2","title":"In Vitro Maturation and Embryo Production in Cattle","year":2006,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Blastocyst; Oocyte; In vitro maturation; Andrology; Biology; In vitro fertilisation; Human fertilization; Embryo; In vitro; Embryogenesis; Cell biology; Anatomy; Genetics; Medicine","score_opus":0.019261101957701088,"score_gpt":0.3814918780562266,"score_spread":0.3622307760985255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W113016544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9714728,0.0012461126,0.023938352,0.002243251,0.0002632355,0.00035039164,9.56338e-7,0.000010394028,0.00047450073],"genre_scores_gemma":[0.75865203,0.000018775303,0.2407671,0.00024239335,0.000081380145,0.00004359355,0.00003641539,0.00000656921,0.0001517072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983068,0.00084808824,0.00024937486,0.00041169094,0.000023559334,0.0001604835],"domain_scores_gemma":[0.9996658,0.000046935995,0.000039071783,0.00020296153,0.000031128246,0.000014113269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013844859,0.00008615079,0.00023689977,0.00020191672,0.000010956287,0.0000018231392,0.000029606577,0.0001919661,0.000007807493],"category_scores_gemma":[0.0008654375,0.000074192045,0.00001955507,0.0002411364,0.00014324475,0.000027602899,0.000024530402,0.0002241312,0.0000018725234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012970781,0.000089681154,0.024781616,0.000016593707,0.000003182922,0.000016004215,0.000053313775,0.0000057128095,0.9649201,0.00018380824,0.0000144344185,0.008618459],"study_design_scores_gemma":[0.0003367608,0.000045575107,0.4747004,0.0000057147186,0.0000035400876,0.000031374722,0.00001367077,0.000033125394,0.51628643,0.008247484,0.00024750162,0.00004841204],"about_ca_topic_score_codex":0.00025419754,"about_ca_topic_score_gemma":0.000046315112,"teacher_disagreement_score":0.44991878,"about_ca_system_score_codex":0.00005603873,"about_ca_system_score_gemma":0.00002165795,"threshold_uncertainty_score":0.30254638},"labels":[],"label_agreement":null},{"id":"W113990377","doi":"10.1007/978-1-4939-1465-4_19","title":"Identifying Putative Drug Targets and Potential Drug Leads: Starting Points for Virtual Screening and Docking","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Drug; Docking (animal); Virtual screening; Computational biology; Computer science; Pharmacology; Drug discovery; Medicine; Biology; Bioinformatics","score_opus":0.0245223129225527,"score_gpt":0.38892597120765776,"score_spread":0.36440365828510507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W113990377","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.088163085,0.00053576205,0.90990466,0.00070347445,0.000347213,0.00025707332,0.0000037955974,0.000050077862,0.000034886274],"genre_scores_gemma":[0.14688605,0.0000066900006,0.85251194,0.00048391704,0.000045901208,0.00002932022,0.00000714149,0.000017593507,0.0000114262575],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9947782,0.0034122514,0.00043699227,0.00079740357,0.00013342603,0.00044173925],"domain_scores_gemma":[0.9969006,0.0024789104,0.0002031933,0.0002383799,0.00008868535,0.00009021753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0064243097,0.00022551075,0.00038086993,0.00030705796,0.00018790491,0.00015881019,0.0003901119,0.00008114187,0.0000013827417],"category_scores_gemma":[0.0017296993,0.00023209979,0.00007792714,0.00026819343,0.00016216925,0.0002822633,0.00074528676,0.00023645964,5.441773e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004758351,0.00003232335,0.0011228615,0.000059301095,0.000066049775,0.000021369926,0.0036994645,0.020750908,0.16446868,0.1443033,0.00001297976,0.66541517],"study_design_scores_gemma":[0.0007942903,0.00007582793,0.00095630856,0.000040843857,0.000013710184,0.000018890141,0.0002079535,0.6356577,0.0444319,0.31733418,0.00017381685,0.00029454113],"about_ca_topic_score_codex":0.00003380298,"about_ca_topic_score_gemma":0.00000556698,"teacher_disagreement_score":0.66512066,"about_ca_system_score_codex":0.000028599941,"about_ca_system_score_gemma":0.000033033175,"threshold_uncertainty_score":0.94647545},"labels":[],"label_agreement":null},{"id":"W114564532","doi":"10.1007/978-1-60327-164-6_7","title":"Enumeration of Bacteriophages by Double Agar Overlay Plaque Assay","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1083,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Enumeration; Agar; Virus quantification; Microbiology; Overlay; Biology; Computer science; Bacteria; Mathematics; Virology; Combinatorics; Genetics","score_opus":0.01007905393934878,"score_gpt":0.35339769398782045,"score_spread":0.3433186400484717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W114564532","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34946278,0.00015373096,0.64294225,0.00058347575,0.00025369268,0.00020664948,0.000016781294,0.000021077234,0.0063595828],"genre_scores_gemma":[0.4959556,0.000054200777,0.5026106,0.00074623903,0.000016697615,0.000012418641,0.000048033497,0.000011310275,0.0005448988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988683,0.00041361214,0.0002468741,0.0002472934,0.0000371693,0.00018679234],"domain_scores_gemma":[0.999623,0.00005250284,0.00009398211,0.0001902748,0.000006188601,0.000034041026],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00048192733,0.00010997886,0.00018644944,0.000041793748,0.000028463237,0.000010311038,0.00014741837,0.00013286067,0.0010331353],"category_scores_gemma":[0.000040345763,0.00010320888,0.000059549944,0.0001455519,0.000083760686,0.00007282747,0.00005478329,0.00013482424,0.000027825034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023128026,0.00006455566,0.0002700843,0.0000013526425,0.0000052859723,0.0000030938534,0.000059214442,0.00003427009,0.97196853,0.00025920704,0.00030452298,0.027006773],"study_design_scores_gemma":[0.00030342577,0.00013288588,0.007620104,0.0000056091144,0.000006465576,0.000008878333,0.000007457249,0.000058196212,0.966225,0.000592663,0.02492775,0.00011156152],"about_ca_topic_score_codex":0.00026730524,"about_ca_topic_score_gemma":0.000027984279,"teacher_disagreement_score":0.14649282,"about_ca_system_score_codex":0.000058596383,"about_ca_system_score_gemma":0.0000053712074,"threshold_uncertainty_score":0.9998801},"labels":[],"label_agreement":null},{"id":"W115059295","doi":"10.1007/978-1-61779-139-0_13","title":"Rapamycin-Based Inducible Translocation Systems for Studying Phagocytosis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"FKBP; Phagosome; Phagocytosis; Cell biology; Phagolysosome; Biology; GTPase; Autophagy; Green fluorescent protein; Immune system; Biochemistry; Gene; Immunology","score_opus":0.09853057921603983,"score_gpt":0.3825941632639532,"score_spread":0.2840635840479133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W115059295","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060395427,0.011032648,0.9263549,0.000060239454,0.0009197219,0.0008324862,0.0000119917995,0.000056425142,0.0003361964],"genre_scores_gemma":[0.7857485,0.000060280203,0.2133625,0.00013447706,0.000015546271,0.0004654814,0.00012467566,0.00003018134,0.000058388872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690235,0.0016843089,0.00052639656,0.00045725363,0.000019702933,0.00041000627],"domain_scores_gemma":[0.9990566,0.00028018397,0.0001739013,0.00038359518,0.00008787063,0.000017868595],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019394114,0.00021295602,0.00046644366,0.00032308107,0.00010469809,0.000008305505,0.00025581138,0.00044406645,0.00006284438],"category_scores_gemma":[0.00016684498,0.00019722222,0.0001443621,0.00027259107,0.00013702983,0.000046293015,0.00002770479,0.00019412633,0.00001406952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016331759,0.00016768539,0.0014059395,0.00002892247,0.00010359239,7.915261e-7,0.00038527272,0.00010611315,0.9657923,0.0048244577,0.000020593008,0.027001008],"study_design_scores_gemma":[0.0023670406,0.0003833468,0.001456686,0.00003964104,0.000052010924,0.000008017321,0.00018238186,0.00078359846,0.9899605,0.0014741999,0.0030487413,0.00024383985],"about_ca_topic_score_codex":0.00020537236,"about_ca_topic_score_gemma":0.00000578924,"teacher_disagreement_score":0.72535306,"about_ca_system_score_codex":0.000061321545,"about_ca_system_score_gemma":0.00006908135,"threshold_uncertainty_score":0.80424887},"labels":[],"label_agreement":null},{"id":"W115086268","doi":"10.1007/978-1-4939-6691-2_15","title":"Methods for the Isolation of Genes Encoding Novel PHA Metabolism Enzymes from Complex Microbial Communities","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Gene; Isolation (microbiology); Biology; Enzyme; Computational biology; Genetics; Biochemistry; Microbiology","score_opus":0.10887249831696778,"score_gpt":0.39424509398161534,"score_spread":0.28537259566464757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W115086268","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0149868345,0.031490944,0.9520008,0.0005370404,0.0005608243,0.00020119191,0.00015047043,0.000019210302,0.000052688432],"genre_scores_gemma":[0.065736756,0.00021307493,0.9336748,0.00018868165,0.00006442124,0.00007511062,0.0000079395595,0.000017060498,0.000022148015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99623287,0.002783096,0.0004396396,0.00022579623,0.000048015016,0.00027058212],"domain_scores_gemma":[0.99535805,0.0039152163,0.00020336304,0.00042855792,0.000072600444,0.000022222888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030597504,0.00017184294,0.00044788158,0.00008937651,0.00014457312,0.000024225672,0.0005590953,0.00014630135,0.00021807071],"category_scores_gemma":[0.00036695355,0.00009005237,0.00012438427,0.00008938296,0.00046683138,0.00005497419,0.00018531227,0.000065776054,0.0000016248888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062593856,0.000022983613,0.000050964805,0.0000074899617,0.000030249186,5.373015e-8,0.0004022868,0.0000016396374,0.8059193,0.0053019715,0.0000065668833,0.18819392],"study_design_scores_gemma":[0.00038796922,0.000041808355,0.000084915664,0.000024162531,0.00005050444,0.0000017982604,0.00027079287,0.000749665,0.98153055,0.0040574474,0.012658979,0.00014141116],"about_ca_topic_score_codex":0.0017966169,"about_ca_topic_score_gemma":0.00007651567,"teacher_disagreement_score":0.18805252,"about_ca_system_score_codex":0.000015112645,"about_ca_system_score_gemma":0.000032585474,"threshold_uncertainty_score":0.36722288},"labels":[],"label_agreement":null},{"id":"W115402691","doi":"10.1007/978-1-59745-416-2_11","title":"Different Study Designs in the Epidemiology of Cancer: Case-Control vs. Cohort Studies","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Colorectal Cancer Screening and Detection","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Epidemiology; Cohort study; Cohort; Clinical study design; Medicine; Principal (computer security); Etiology; Cancer; Control (management); Environmental health; Computer science; Internal medicine; Clinical trial; Artificial intelligence; Computer security","score_opus":0.14750107495936102,"score_gpt":0.49102007792669694,"score_spread":0.34351900296733595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W115402691","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81522614,0.0078216465,0.17551924,0.00036647398,0.00017595741,0.00083564984,0.0000026846103,0.000013245378,0.000038954768],"genre_scores_gemma":[0.96123916,0.0004066002,0.037163515,0.00065260776,0.000040510102,0.00047742878,0.0000012178623,0.000009788647,0.000009142927],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9926823,0.0060991156,0.00053610426,0.00034516992,0.00006750493,0.00026983427],"domain_scores_gemma":[0.99719024,0.0022608691,0.00013775917,0.0003134426,0.00006631067,0.000031365802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037000724,0.00015899494,0.0009235547,0.0002054924,0.00004733148,5.275761e-7,0.00010482551,0.00013542069,0.000008843042],"category_scores_gemma":[0.0022890563,0.000098508426,0.000103032566,0.0003185489,0.00024930818,0.000007247122,0.000042525702,0.0003439541,2.9818116e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012603257,0.00019798349,0.9767175,0.000019370209,0.00030241907,0.00092572096,0.0011685205,0.00010729315,0.007589648,0.000060106264,0.000008392446,0.011642745],"study_design_scores_gemma":[0.0028606902,0.0062783714,0.9801951,0.00003520432,0.0002612305,0.0012533665,0.001114735,0.0006054846,0.006176779,0.001043702,0.000039001046,0.00013633924],"about_ca_topic_score_codex":0.0019383699,"about_ca_topic_score_gemma":0.0012890417,"teacher_disagreement_score":0.14601304,"about_ca_system_score_codex":0.000109282955,"about_ca_system_score_gemma":0.000045300214,"threshold_uncertainty_score":0.40170568},"labels":[],"label_agreement":null},{"id":"W115577364","doi":"10.1007/978-1-61779-977-8_7","title":"Rib Histomorphometry for Adult Age Estimation","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic Anthropology and Bioarchaeology Studies","field":"Arts and Humanities","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Estimation; Modalities; Biological age; Forensic anthropology; Process (computing); Computer science; Medicine; Psychology; Medical physics; Gerontology; Social science; Geography; Engineering","score_opus":0.05020093659545571,"score_gpt":0.40494298985929156,"score_spread":0.35474205326383584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W115577364","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009123492,0.0023847509,0.9773533,0.0030628247,0.0023652264,0.00028295067,0.000025456467,0.00005281889,0.0053492202],"genre_scores_gemma":[0.16667667,0.000032262255,0.8301063,0.0019983284,0.00020178761,0.000107970656,0.00006685111,0.000014729064,0.000795094],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99882096,0.00038588064,0.0002125617,0.00017743533,0.000026200538,0.00037696515],"domain_scores_gemma":[0.99935997,0.0003211184,0.0000689319,0.00013520836,0.00008368246,0.00003110994],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.00075013767,0.0001299542,0.00026851927,0.00015129993,0.0001622548,0.0000041386447,0.00010398372,0.00014603884,0.00021365321],"category_scores_gemma":[0.0006978336,0.000105294675,0.00007962742,0.000041841115,0.006077872,0.000037288497,0.000069760645,0.00012983705,0.00001484841],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003237875,0.000054426466,0.002242189,0.000016805954,0.000049389728,0.0000040410287,0.0036010034,0.0000010158226,0.0014147955,0.97968286,0.00078008766,0.012121003],"study_design_scores_gemma":[0.0030480197,0.0014281474,0.0015534399,0.0000470184,0.00026229885,0.00005638199,0.022494657,0.0010415781,0.05061711,0.51150817,0.40660578,0.001337378],"about_ca_topic_score_codex":0.00046893078,"about_ca_topic_score_gemma":0.0008027137,"teacher_disagreement_score":0.46817467,"about_ca_system_score_codex":0.00002997389,"about_ca_system_score_gemma":0.0000089488985,"threshold_uncertainty_score":0.99662703},"labels":[],"label_agreement":null},{"id":"W115689470","doi":"10.1007/978-1-60761-925-3_24","title":"Rapid Isolation of Intact Chloroplasts from Spinach Leaves","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"","keywords":"Percoll; Chloroplast; Spinach; Potassium ferricyanide; Photosystem II; Chemistry; Tricine; Centrifugation; Electron acceptor; Ferricyanide; Photosystem I; Biology; Photosynthesis; Biochemistry","score_opus":0.011975431497706083,"score_gpt":0.34664561462913207,"score_spread":0.334670183131426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W115689470","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4908728,0.00026135248,0.5079943,0.00003814512,0.00029576482,0.000092713584,0.000013692499,0.0000058162127,0.00042544468],"genre_scores_gemma":[0.6014659,0.00009370862,0.39814422,0.00012536612,0.000057895588,0.000018170744,0.000060800765,0.000016594455,0.000017359336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986853,0.00027793995,0.00030987448,0.00042629289,0.00005600518,0.00024458053],"domain_scores_gemma":[0.999248,0.0000495429,0.00014207652,0.00044206294,0.000062442334,0.000055832752],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006000852,0.00017209968,0.00026571503,0.000092129005,0.000023490511,0.0000061168093,0.00028191908,0.00038428992,0.000078512494],"category_scores_gemma":[0.000553068,0.00016159564,0.000098244804,0.00012097582,0.00012079272,0.0000027591443,0.0001538092,0.00021816789,0.0000027989545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000727015,0.000055425447,0.0005706088,0.000009028925,0.000027240854,0.0000023172902,0.000030677144,0.0000037439988,0.97433305,0.0015706121,0.000003053222,0.02332153],"study_design_scores_gemma":[0.00038206618,0.0003088374,0.00040333645,0.0000086942955,0.000013148455,0.000009430941,0.000029038856,0.00014997844,0.98361677,0.009590214,0.005318732,0.00016977919],"about_ca_topic_score_codex":0.000090121386,"about_ca_topic_score_gemma":0.00005784634,"teacher_disagreement_score":0.11059309,"about_ca_system_score_codex":0.000005710021,"about_ca_system_score_gemma":0.00006373612,"threshold_uncertainty_score":0.65896785},"labels":[],"label_agreement":null},{"id":"W116514500","doi":"10.1007/978-1-4939-2398-4_1","title":"Microarray Transposon Tracking for the Mapping of Conditionally Essential Genes in Campylobacter jejuni","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"","keywords":"Transposable element; Campylobacter jejuni; Biology; Genome; Genetics; Gene; Microarray; Transposon mutagenesis; Microarray analysis techniques; Mutant; Computational biology; Bacteria; Gene expression","score_opus":0.0779992884269239,"score_gpt":0.3745964903984676,"score_spread":0.2965972019715437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W116514500","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82491857,0.0015336514,0.17143752,0.0013503769,0.00028791872,0.00033318374,0.000038444115,0.000011102398,0.00008921338],"genre_scores_gemma":[0.86710274,0.000084081716,0.13167933,0.0007223004,0.00015463057,0.000099638106,0.00013423823,0.0000027604287,0.000020262409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976305,0.0012331264,0.00044753842,0.00031298003,0.00005232085,0.00032354266],"domain_scores_gemma":[0.99820197,0.0014650176,0.00013141308,0.00007983394,0.00007719604,0.000044555756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023035766,0.00014093095,0.0003581557,0.000039611255,0.000035892772,0.000007785682,0.00032693532,0.00022445223,0.000044339766],"category_scores_gemma":[0.000358978,0.000056313373,0.00013858234,0.00028236432,0.00017529422,0.000026759944,0.00003650817,0.00013731544,0.0000010473498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060656505,0.000048121667,0.02976983,0.000005919134,0.000018192604,0.0000032380506,0.00014294709,0.00005634457,0.92451596,0.001161661,0.000012085759,0.04420505],"study_design_scores_gemma":[0.001704393,0.00071501074,0.25525707,0.00006045419,0.00005140109,0.0000471956,0.0015498432,0.0004910989,0.6488262,0.061136495,0.029562427,0.000598407],"about_ca_topic_score_codex":0.000286912,"about_ca_topic_score_gemma":0.00044819148,"teacher_disagreement_score":0.27568975,"about_ca_system_score_codex":0.000024521885,"about_ca_system_score_gemma":0.000019608591,"threshold_uncertainty_score":0.22963926},"labels":[],"label_agreement":null},{"id":"W116712366","doi":"10.1007/7651_2015_212","title":"A Concise Protocol for siRNA-Mediated Gene Suppression in Human Embryonic Stem Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Embryonic stem cell; Stem cell; Small interfering RNA; Limiting; Regenerative medicine; Biology; Cell biology; Gene; Computational biology; RNA; Genetics; Engineering","score_opus":0.06776083671774935,"score_gpt":0.4510054275727836,"score_spread":0.38324459085503426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W116712366","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17450145,0.00044427635,0.720118,0.00025511847,0.0003399505,0.10327626,0.00007960156,0.000043606124,0.0009417569],"genre_scores_gemma":[0.028135102,0.000028328202,0.6996855,0.0008247829,0.0002716048,0.26804444,0.00061349577,0.00022817041,0.002168548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956885,0.0020889593,0.0005278761,0.0008163264,0.00015143739,0.0007268846],"domain_scores_gemma":[0.9987443,0.00011233511,0.00015036072,0.00063091604,0.00016026555,0.00020180616],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027407554,0.00029411676,0.00043683982,0.00025801215,0.000038809,0.000018951,0.0005520661,0.00058044284,0.000012446186],"category_scores_gemma":[0.00033253193,0.000271208,0.00013112454,0.00027803137,0.00016534493,0.0000042731526,0.0004070408,0.00027549962,0.000009052753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040323424,0.00015334223,0.00093633245,0.000061463936,0.000022291533,0.000036310175,0.000038236572,0.00019287794,0.99608237,0.00006831055,0.00052285445,0.0014823875],"study_design_scores_gemma":[0.0046329126,0.0008509085,0.00004027156,0.000027799751,0.000005056846,0.0000100644775,0.00003892086,0.0006771971,0.95055836,0.0006756209,0.042189922,0.0002929848],"about_ca_topic_score_codex":0.00003551584,"about_ca_topic_score_gemma":0.000031654057,"teacher_disagreement_score":0.16476819,"about_ca_system_score_codex":0.00009553834,"about_ca_system_score_gemma":0.0002453422,"threshold_uncertainty_score":0.999974},"labels":[],"label_agreement":null},{"id":"W116715735","doi":"10.1007/978-1-61779-794-1_14","title":"Suspension Bioreactor Expansion of Undifferentiated Human Embryonic Stem Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Embryonic stem cell; Regenerative medicine; Cell biology; Stem cell; Tissue engineering; KOSR; Suspension culture; Biology; Cell; Cell therapy; Cell culture; Adult stem cell; Biomedical engineering; Medicine; Genetics; Gene","score_opus":0.03855444623097308,"score_gpt":0.38851807974778063,"score_spread":0.34996363351680754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W116715735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84120816,0.0015903185,0.15631123,0.00002641052,0.00028652654,0.00029893478,0.000010905439,0.000012072062,0.0002554426],"genre_scores_gemma":[0.9220002,0.00014049202,0.07724325,0.000056272776,0.00006272438,0.000024360894,0.00012979392,0.000044755856,0.00029813458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964358,0.0018537003,0.00043038992,0.00047419683,0.00014206042,0.0006638368],"domain_scores_gemma":[0.99887294,0.000055433466,0.00017210297,0.0006646958,0.00009095962,0.000143869],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014418913,0.00025102592,0.0003969839,0.00024486045,0.00004609884,0.000006904129,0.00037645997,0.0004652628,0.000038676855],"category_scores_gemma":[0.000071981,0.00022658412,0.00016338492,0.00025862918,0.00016547382,0.000004630508,0.00041651572,0.0002279697,0.0000122238625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005547779,0.00014214324,0.006306404,0.0000379321,0.00004733093,0.0000042977485,0.000030373461,0.000007718993,0.9903895,0.000321465,0.000053557498,0.0026037784],"study_design_scores_gemma":[0.0006055173,0.0003107506,0.0018495201,0.000020186695,0.00001751143,0.000008358907,0.00005048707,0.000032251588,0.9950727,0.00014463154,0.0016604196,0.00022765735],"about_ca_topic_score_codex":0.00004539339,"about_ca_topic_score_gemma":0.000008372086,"teacher_disagreement_score":0.080792055,"about_ca_system_score_codex":0.00003678511,"about_ca_system_score_gemma":0.000053402047,"threshold_uncertainty_score":0.9239832},"labels":[],"label_agreement":null},{"id":"W117351027","doi":"10.1007/978-1-61779-270-0_25","title":"Poly(ADP-Ribose) Metabolism Analysis in the Nematode Caenorhabditis elegans","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Caenorhabditis elegans; Poly ADP ribose polymerase; Biology; DNA repair; Enzyme; Biochemistry; Transcription (linguistics); DNA damage; Polymerase; Ribose; DNA; Cell biology; Gene","score_opus":0.05054971979982283,"score_gpt":0.4349767475445138,"score_spread":0.384427027744691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W117351027","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07747594,0.0062671877,0.906082,0.0016288253,0.0003089251,0.00045574436,0.000017161296,0.000044031156,0.0077202213],"genre_scores_gemma":[0.27060732,0.00021915625,0.72177035,0.006845875,0.00014175395,0.0002456436,0.000050648847,0.000035321635,0.00008394567],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99578303,0.002652914,0.0005189036,0.00046007807,0.00014009596,0.00044496104],"domain_scores_gemma":[0.9987452,0.0002457878,0.00012724685,0.0007542796,0.00005546532,0.00007199625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023198242,0.00022268375,0.0007223933,0.00074360025,0.000036452904,0.000008011228,0.00032464875,0.00025572817,0.0004402079],"category_scores_gemma":[0.000265095,0.00016331548,0.00028052807,0.0018544873,0.00023022466,0.000030747316,0.00004876224,0.00045884465,0.000013116596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056987285,0.000849542,0.10989471,0.000060848914,0.0019842675,0.0012540269,0.009413989,0.000024986684,0.7648739,0.06545019,0.00029550403,0.04532815],"study_design_scores_gemma":[0.0055444795,0.00050566334,0.20766301,0.00007034786,0.0016903789,0.00036549402,0.0010720865,0.00049885566,0.6824763,0.06460405,0.034685016,0.0008243524],"about_ca_topic_score_codex":0.001188133,"about_ca_topic_score_gemma":0.00019486285,"teacher_disagreement_score":0.19313136,"about_ca_system_score_codex":0.000069012814,"about_ca_system_score_gemma":0.00007562478,"threshold_uncertainty_score":0.6659812},"labels":[],"label_agreement":null},{"id":"W1174130833","doi":"10.1007/978-1-4939-2809-5_14","title":"Induction of T Cell Development In Vitro by Delta-Like (Dll)-Expressing Stromal Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Stromal cell; Cell biology; Haematopoiesis; Biology; Bone marrow; Progenitor cell; Stem cell; Immunology; T cell; In vitro; Fibroblast; Cancer research; Genetics; Immune system","score_opus":0.02037607622304497,"score_gpt":0.33391525363420105,"score_spread":0.31353917741115606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1174130833","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7650244,0.000822044,0.23345968,0.000021293845,0.00026680433,0.00015359615,0.00001130122,0.0000056809854,0.0002351647],"genre_scores_gemma":[0.4754012,0.000014953871,0.5240082,0.00008568507,0.000017463655,0.000024231796,0.00035038046,0.0000137486595,0.00008411695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978874,0.00080131565,0.00046906195,0.0004520875,0.00007316581,0.0003169996],"domain_scores_gemma":[0.99946743,0.000021252854,0.0001561091,0.0002233601,0.00006140272,0.00007046075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011595623,0.00019555756,0.00027581738,0.00015602182,0.000024753344,0.000004871838,0.0001927567,0.00044844317,0.0000049314945],"category_scores_gemma":[0.000058117123,0.00019646529,0.00004958569,0.0001916716,0.00013362971,0.000004895031,0.00016786875,0.00014573532,0.000002378611],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018205435,0.00010007236,0.0030539064,0.00001089838,0.000017611454,0.0000029499301,0.0000968278,0.000096020194,0.979259,0.000009134612,0.00007641121,0.017095078],"study_design_scores_gemma":[0.00083420647,0.00011664378,0.00067099376,0.000008139714,0.0000049099804,0.000011025631,0.000083593666,0.00003724777,0.99270684,0.0002278011,0.0050890096,0.00020957914],"about_ca_topic_score_codex":0.000027250098,"about_ca_topic_score_gemma":0.000011120166,"teacher_disagreement_score":0.29054853,"about_ca_system_score_codex":0.00005870885,"about_ca_system_score_gemma":0.00016294631,"threshold_uncertainty_score":0.8011622},"labels":[],"label_agreement":null},{"id":"W117901761","doi":"10.1007/978-1-60327-009-0_16","title":"Fertilization In Vitro","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Atlantic Cancer Research Institute","funders":"","keywords":"Intracytoplasmic sperm injection; In vitro fertilisation; Infertility; Gynecology; Human fertilization; Cryopreservation; Medicine; Assisted reproductive technology; Reproductive technology; Andrology; Embryo; Biology; Pregnancy; Anatomy","score_opus":0.09074651178970997,"score_gpt":0.5030818825798066,"score_spread":0.41233537079009663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W117901761","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001300212,0.90465325,0.09300042,0.00007376189,0.00020925373,0.00089909055,0.000004801035,0.000024383817,0.0011220389],"genre_scores_gemma":[0.0000033438987,0.7555923,0.24361597,0.00026187324,0.000052117524,0.00008611557,0.0002772121,0.000020303514,0.0000907703],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9938122,0.0041211653,0.0007998311,0.0008746541,0.000045721856,0.0003464193],"domain_scores_gemma":[0.99880487,0.00020411305,0.00018055394,0.00069875224,0.000058305763,0.000053382933],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0023957586,0.00033968673,0.0021901533,0.00052993913,0.000014196964,0.0000029206687,0.00017443941,0.0011348497,0.000032747303],"category_scores_gemma":[0.0026593113,0.00025979595,0.00031545572,0.00065651175,0.00016273558,0.000011773576,0.00006712983,0.0007939468,0.00001685879],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028527205,0.000120290446,0.00006034845,0.0011264763,0.000040346797,0.00007830603,0.000010690596,9.803622e-8,0.0073668053,0.0001531497,0.000005114672,0.9907531],"study_design_scores_gemma":[0.0005337994,0.00024259408,0.00080914464,0.0015466501,0.00027673846,0.00013314086,0.00000289169,0.000009488558,0.0035492263,0.005635911,0.98690665,0.00035374955],"about_ca_topic_score_codex":0.00001225541,"about_ca_topic_score_gemma":0.0000014697068,"teacher_disagreement_score":0.99039936,"about_ca_system_score_codex":0.00018001407,"about_ca_system_score_gemma":0.00018621446,"threshold_uncertainty_score":0.9999854},"labels":[],"label_agreement":null},{"id":"W118009888","doi":"10.1007/978-1-4614-7209-4_6","title":"Developing an iMALDI Method","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia; University of Victoria","funders":"National Institute of Environmental Health Sciences; National Cancer Institute; U.S. Public Health Service","keywords":"Peptide; Chemistry; Chromatography; Computational biology; Amino acid; Epitope; Matrix-assisted laser desorption/ionization; Biochemistry; Biology; Antibody","score_opus":0.03211835535989503,"score_gpt":0.4420964172350846,"score_spread":0.40997806187518954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W118009888","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007725603,0.00009931539,0.96880615,0.0005358744,0.000019643005,0.00011045144,0.0000023903117,0.00013345233,0.022567123],"genre_scores_gemma":[0.007525873,0.000017057817,0.9914777,0.00040564363,0.000028749822,0.00035646235,0.000023571523,0.000022544475,0.00014239652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986496,0.0003286719,0.00027140704,0.00039705492,0.000041750664,0.0003115155],"domain_scores_gemma":[0.9991931,0.00014719863,0.00007117842,0.00048337967,0.000043245047,0.00006191552],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006510284,0.00014493616,0.000230349,0.00011534696,0.00003931916,0.00002030735,0.0003551689,0.00022189957,0.0034453077],"category_scores_gemma":[0.00014783235,0.0001369988,0.000055954715,0.000282476,0.00005046943,0.00003605778,0.00011860976,0.00023676179,0.000016499362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[8.5656166e-7,0.000018732633,0.00057697954,0.000008377454,0.0000065834765,0.0000016703851,0.000011775158,0.000001437381,0.7425936,0.18548791,0.000009993357,0.071282096],"study_design_scores_gemma":[0.00008075646,0.000015747572,0.00012887719,0.000004906906,0.0000039170814,0.000011060634,0.000027661798,0.00072180346,0.7089678,0.27994862,0.009928147,0.0001606783],"about_ca_topic_score_codex":0.00021979547,"about_ca_topic_score_gemma":0.0000039552547,"teacher_disagreement_score":0.09446071,"about_ca_system_score_codex":0.00006910451,"about_ca_system_score_gemma":0.00002887496,"threshold_uncertainty_score":0.99746567},"labels":[],"label_agreement":null},{"id":"W118272545","doi":"10.1007/978-1-59745-540-4_11","title":"Systematic Characterization of the Protein Interaction Network and Protein Complexes in Saccharomyces cerevisiae Using Tandem Affinity Purification and Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Tandem affinity purification; Saccharomyces cerevisiae; Chemistry; Tandem mass spectrometry; FLAG-tag; Fusion protein; Protein purification; Mass spectrometry; Open reading frame; Biochemistry; Protease; Affinity chromatography; Biology; Yeast; Chromatography; Peptide sequence; Recombinant DNA; Gene; Enzyme","score_opus":0.02565687635675849,"score_gpt":0.3571906834300886,"score_spread":0.3315338070733301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W118272545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8635963,0.0009412916,0.13443081,0.00011026367,0.000029428867,0.00085700216,0.0000031594523,0.000002616283,0.00002911536],"genre_scores_gemma":[0.86946803,0.00007655105,0.13031739,0.000032279353,0.00003165311,0.000037325703,0.000014889997,0.000008139253,0.000013759931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99760854,0.0014821867,0.00035658348,0.00029121604,0.000069301,0.00019216255],"domain_scores_gemma":[0.9994852,0.000025708023,0.00018673294,0.00022902424,0.000045287143,0.00002806614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010668228,0.00012566314,0.00026409095,0.00010254764,0.000040453146,0.000018383515,0.00013688451,0.00015985454,0.0000023846922],"category_scores_gemma":[0.0002900391,0.00009784064,0.000035635807,0.00028593434,0.00009165953,0.0000050170825,0.00008371721,0.00015049304,1.1677642e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034167984,0.000027589247,0.0041709025,0.00033600142,0.000011562067,6.703487e-7,0.000022550877,0.000032440683,0.9943611,0.0003710713,1.2625992e-7,0.00063180673],"study_design_scores_gemma":[0.0002411361,0.00019760572,0.017360914,0.0005002417,0.0000090659505,0.000010288659,0.000029830968,0.0013487702,0.9778211,0.0023551015,0.0000149819925,0.00011093819],"about_ca_topic_score_codex":0.000011757409,"about_ca_topic_score_gemma":0.000006854688,"teacher_disagreement_score":0.016539985,"about_ca_system_score_codex":0.00002044789,"about_ca_system_score_gemma":0.000027904547,"threshold_uncertainty_score":0.39898255},"labels":[],"label_agreement":null},{"id":"W118274965","doi":"10.1007/978-1-61779-968-6_16","title":"Expression of Single-Domain Antibodies in Bacterial Systems","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Guelph; Carleton University; Institute for Biological Sciences","funders":"","keywords":"Periplasmic space; Bacteria; Computational biology; Expression (computer science); Biology; Recombinant DNA; Antibody; Domain (mathematical analysis); Cell biology; Molecular biology; Computer science; Gene; Escherichia coli; Genetics; Mathematics","score_opus":0.057985440574407146,"score_gpt":0.43501525760967025,"score_spread":0.3770298170352631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W118274965","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94278437,0.003448238,0.05060615,0.0001419492,0.00042516814,0.0002733356,0.000008290014,0.0000086887085,0.0023038143],"genre_scores_gemma":[0.5704655,0.00008720044,0.4290395,0.000057949164,0.00014795485,0.000022933971,0.000031344556,0.000015441832,0.00013215764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974597,0.0014105246,0.00040482744,0.00019165783,0.00011147387,0.0004217866],"domain_scores_gemma":[0.99932575,0.0002674314,0.00007577356,0.00020468242,0.000038639584,0.000087740525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015887899,0.00012999929,0.0005012267,0.00028354788,0.000014349348,0.0000034482198,0.00010456287,0.00018962841,0.00006528746],"category_scores_gemma":[0.0003546486,0.00009753617,0.000077277604,0.00020650419,0.00017590549,0.000027515802,0.00012830699,0.00020284187,0.000004676242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031524478,0.00019687384,0.11196882,0.0001248778,0.0000125876295,0.000028884493,0.00019273761,0.0000019709064,0.8828197,0.0019948909,0.000014483195,0.0023289106],"study_design_scores_gemma":[0.0009512737,0.00032741774,0.020360144,0.00021528958,0.000008490836,0.0000631454,0.00015654424,0.000031156527,0.9683309,0.0008020597,0.008620949,0.00013263241],"about_ca_topic_score_codex":0.00018259944,"about_ca_topic_score_gemma":0.000004252558,"teacher_disagreement_score":0.37843335,"about_ca_system_score_codex":0.00003928544,"about_ca_system_score_gemma":0.000030407733,"threshold_uncertainty_score":0.39774096},"labels":[],"label_agreement":null},{"id":"W118717374","doi":"10.1007/978-1-60327-064-9_28","title":"Isolation of Phosphoproteins","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Isolation (microbiology); Posttranslational modification; Biochemistry; Chemistry; Computational biology; Biology; Bioinformatics; Enzyme","score_opus":0.04450508849883181,"score_gpt":0.45817837419886936,"score_spread":0.4136732857000376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W118717374","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[4.359113e-7,0.49712545,0.50147426,0.0000020225332,0.000010236243,0.00017806188,0.000018875837,0.00002220177,0.001168456],"genre_scores_gemma":[7.811541e-8,0.5017721,0.49775937,0.0000048992256,0.00001124358,0.00032209145,0.00006689464,0.000022385684,0.000040963634],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99853283,0.00021046508,0.00064433983,0.00038786329,0.0000387791,0.00018570802],"domain_scores_gemma":[0.9987272,0.00016149005,0.00046335303,0.0005892748,0.00003199257,0.00002669789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020781085,0.00024986122,0.0010786697,0.00012346666,0.000021972663,0.0000019044475,0.0003458828,0.00067926495,0.00011090876],"category_scores_gemma":[0.00015484473,0.00022992243,0.00031225645,0.00027000945,0.000118851734,0.000008802223,0.00012314625,0.000441716,0.000002987335],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000014704038,0.000027184164,0.0000022130598,0.0012976285,0.000023764534,0.0000032658681,0.000005315509,0.0000010862904,0.047862995,0.0049619726,0.0000033955478,0.9458097],"study_design_scores_gemma":[0.00005923764,0.000014189842,2.3776025e-8,0.00088895176,0.00003892631,0.00002916136,0.0000011662247,0.00001417378,0.100499526,0.013159994,0.8850797,0.0002149638],"about_ca_topic_score_codex":0.00002277193,"about_ca_topic_score_gemma":5.5803474e-7,"teacher_disagreement_score":0.9455947,"about_ca_system_score_codex":0.00007259017,"about_ca_system_score_gemma":0.0000839571,"threshold_uncertainty_score":0.93759644},"labels":[],"label_agreement":null},{"id":"W118996435","doi":"10.1007/978-1-4939-2193-5_18","title":"Cord Blood Clinical Processing, Cryopreservation, and Storage","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Canadian Blood Services","funders":"","keywords":"Cryopreservation; Computer science; Medicine; Biology; Cell biology","score_opus":0.05225052731431306,"score_gpt":0.4568655956725787,"score_spread":0.4046150683582656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W118996435","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23166555,0.000303507,0.7661661,0.00027194255,0.00008617235,0.0001773439,6.937891e-7,0.000024982246,0.0013036936],"genre_scores_gemma":[0.11118657,0.00005921665,0.8876107,0.00095595437,0.000051126543,0.000021515745,0.00001804254,0.00001600629,0.00008087662],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99788064,0.0011695265,0.00040463635,0.00031432972,0.00006238699,0.00016845358],"domain_scores_gemma":[0.99919003,0.00037554064,0.00008051078,0.00021736394,0.00005967292,0.000076884935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024342204,0.000102765676,0.0003370667,0.000093667804,0.000021766738,0.000006504088,0.00006574166,0.00021810396,0.000024553352],"category_scores_gemma":[0.0008949362,0.00008947346,0.000040014547,0.0001433912,0.00014289084,0.000016710244,0.000025056808,0.00020359019,0.000002989352],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018300599,0.0002179621,0.3774751,0.00037674466,0.00005582884,0.00006829886,0.00020416538,0.0000045746774,0.43288112,0.005660818,0.000026621687,0.18284577],"study_design_scores_gemma":[0.020880884,0.006230132,0.44756943,0.0008596181,0.0011643065,0.0012653561,0.0002130954,0.030236745,0.39458406,0.055071715,0.040637173,0.0012875157],"about_ca_topic_score_codex":0.000011514198,"about_ca_topic_score_gemma":0.000003113768,"teacher_disagreement_score":0.18155825,"about_ca_system_score_codex":0.0000069022967,"about_ca_system_score_gemma":0.000039537328,"threshold_uncertainty_score":0.3648622},"labels":[],"label_agreement":null},{"id":"W119046399","doi":"10.1007/978-1-62703-481-4_5","title":"Quantification and Visualization of Neutrophil Extracellular Traps (NETs) from Murine Bone Marrow-Derived Neutrophils","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Neutrophil extracellular traps; Extracellular; Bone marrow; Cell biology; Chromatin; In vitro; Microbiology; Biology; Chemistry; Immunology; Inflammation; Biochemistry; DNA","score_opus":0.02138974132629929,"score_gpt":0.3214601789212847,"score_spread":0.3000704375949854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W119046399","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.613636,0.0052065756,0.3801255,0.00028482528,0.00023683641,0.00041323708,0.00001967692,0.000032306387,0.000045037006],"genre_scores_gemma":[0.8609796,0.00045327868,0.13757896,0.00025600728,0.00002316301,0.000120360615,0.0004386017,0.000044013897,0.00010598463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99579406,0.0023847043,0.0007169579,0.0006703031,0.000035549867,0.00039841724],"domain_scores_gemma":[0.9987712,0.0002701442,0.00030701153,0.0004836843,0.00012706446,0.000040879033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006299568,0.00031173392,0.00066345645,0.00033447755,0.00007425658,0.000014449309,0.00023959676,0.00047349653,0.0005607695],"category_scores_gemma":[0.0001539277,0.00028711002,0.000101195496,0.00030115194,0.00039748344,0.000089714566,0.00013294349,0.0002805393,0.000055612716],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076756296,0.00013246795,0.00066710514,0.000017814886,0.000084132735,0.000009630693,0.00014674074,0.000009442405,0.96478695,0.017971136,0.000016989525,0.01608086],"study_design_scores_gemma":[0.0012419285,0.00030161886,0.006386153,0.000026815009,0.00004470925,0.000018661445,0.00008707927,0.000076262586,0.9737256,0.016412573,0.0014083708,0.0002702303],"about_ca_topic_score_codex":0.00045282277,"about_ca_topic_score_gemma":0.00000960741,"teacher_disagreement_score":0.24734361,"about_ca_system_score_codex":0.000025300229,"about_ca_system_score_gemma":0.00002696838,"threshold_uncertainty_score":0.9999581},"labels":[],"label_agreement":null},{"id":"W119623166","doi":"10.1007/978-1-61779-352-3_4","title":"Expression of a Secreted Protein in Mammalian Cells Using Baculovirus Particles","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada); McGill University","funders":"","keywords":"Recombinant DNA; Transduction (biophysics); Biology; Cell biology; Protein expression; Computational biology; In vitro; Cell culture; Gene; Gene expression; Baculoviridae; Genetics; Biochemistry; Spodoptera","score_opus":0.0396596395383895,"score_gpt":0.36508374595024895,"score_spread":0.3254241064118594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W119623166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83363354,0.00055126095,0.1651159,0.0000042685756,0.000105245635,0.00028626263,0.000009384277,0.0000071103977,0.00028701618],"genre_scores_gemma":[0.65192777,0.000014488729,0.34788463,0.000064815475,0.000018521052,0.00004746414,0.000009592697,0.000018620853,0.000014120446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975951,0.0011414622,0.00043034033,0.00043784713,0.00005995777,0.00033534528],"domain_scores_gemma":[0.9992997,0.00001547333,0.00015927263,0.0004026003,0.00004621399,0.000076716984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055191887,0.00018751588,0.00027080192,0.00015407697,0.000026012096,0.0000046148034,0.00021672939,0.00029952364,0.00007218917],"category_scores_gemma":[0.00016824264,0.00017288182,0.00011673888,0.0002267367,0.0001399714,0.000004072594,0.00019870714,0.00012705811,0.0000016500414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018989423,0.00014525045,0.0061914786,0.000027986665,0.000010750003,0.000016686105,0.00009411517,0.00008707495,0.9914631,0.00016001568,0.000008320783,0.0016053087],"study_design_scores_gemma":[0.0005975467,0.00032498263,0.00080882857,0.000052360527,0.000007642028,0.000004450329,0.000059049144,0.00017538658,0.99469894,0.0027993673,0.00027187666,0.00019958366],"about_ca_topic_score_codex":0.0003176421,"about_ca_topic_score_gemma":0.000034769295,"teacher_disagreement_score":0.18276873,"about_ca_system_score_codex":0.000016144066,"about_ca_system_score_gemma":0.000057647532,"threshold_uncertainty_score":0.7049916},"labels":[],"label_agreement":null},{"id":"W119843478","doi":"10.1007/978-1-60327-009-0_18","title":"The Human Embryo: Ethical and Legal Aspects","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Centre for Interdisciplinary Research in Rehabilitation","funders":"Stem Cell Network","keywords":"Political science; Embryo; Legal status; Ethical issues; Engineering ethics; Law; Environmental ethics; Biology; Engineering; Genetics; Philosophy","score_opus":0.02110324074845985,"score_gpt":0.4163908579483669,"score_spread":0.395287617199907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W119843478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55140203,0.0074999835,0.4079794,0.011664657,0.00041038878,0.00070604857,0.00000662909,0.000038529837,0.020292373],"genre_scores_gemma":[0.71155775,0.00085722,0.27916777,0.0061848653,0.00035446728,0.00006066615,0.00006937872,0.000051179417,0.0016967179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99707335,0.0015740313,0.00026818027,0.0005016729,0.000102661084,0.00048010462],"domain_scores_gemma":[0.9992288,0.00009956406,0.00005133976,0.00047555828,0.000050428393,0.00009432302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002203813,0.00017278636,0.00019749446,0.00006944272,0.00016948515,0.000041183386,0.00037592516,0.000514779,0.0000055168352],"category_scores_gemma":[0.0006435938,0.0001298304,0.000075827265,0.00013819741,0.0003322882,0.000001511533,0.00022695336,0.00058831606,0.000003321833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002952684,0.000023455297,0.00014347382,0.0000033801443,0.000017818922,0.00003745274,0.0000066308107,0.0000046339724,0.95353246,0.031111212,0.00017014639,0.014919808],"study_design_scores_gemma":[0.0006618883,0.0007238069,0.0032595573,0.000007892111,0.000008722981,0.000102402024,0.000024595276,0.000078758945,0.87304854,0.020120252,0.10169687,0.0002667179],"about_ca_topic_score_codex":0.00002214487,"about_ca_topic_score_gemma":0.000029161543,"teacher_disagreement_score":0.16015574,"about_ca_system_score_codex":0.00001629638,"about_ca_system_score_gemma":0.000054973865,"threshold_uncertainty_score":0.529433},"labels":[],"label_agreement":null},{"id":"W120598270","doi":"10.1007/978-1-59745-028-7_17","title":"Affinity Purification of Soluble Lysosomal Proteins for Mass Spectrometric Identification","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Defence Research and Development Canada","funders":"","keywords":"Chemistry; Chromatography; Mass spectrometry; Protein mass spectrometry; Sample preparation in mass spectrometry; Trypsin; Tandem mass spectrometry; Bottom-up proteomics; Gel electrophoresis; Matrix-assisted laser desorption/ionization; Peptide; Protein purification; Biochemistry; Electrospray ionization; Desorption; Adsorption; Enzyme","score_opus":0.06538381648157661,"score_gpt":0.4219134545543297,"score_spread":0.3565296380727531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W120598270","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21403246,0.0005825314,0.78330666,0.00032998814,0.00008246476,0.0012164417,0.0000053697468,0.00002145836,0.0004226059],"genre_scores_gemma":[0.2902942,0.0000674992,0.7090315,0.000032346084,0.00002431681,0.00027211558,0.000053898977,0.000018057548,0.00020601931],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806386,0.0006055073,0.00046134676,0.0003851211,0.00016285425,0.0003212817],"domain_scores_gemma":[0.99886996,0.00022069777,0.00016345062,0.00043981965,0.00024217114,0.000063893625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015339585,0.00012141254,0.00037816793,0.0006893214,0.000055517234,0.0000041764692,0.00019425876,0.00021035895,0.000042584736],"category_scores_gemma":[0.0031106453,0.00011658371,0.00013425502,0.0011446513,0.00020102599,0.000032892407,0.000041246174,0.0001944414,0.0000064870374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017256117,0.00023991025,0.014044126,0.0000932516,0.000037088757,0.000012159248,0.00007110837,0.0000070178885,0.9775277,0.002358354,0.000017047732,0.0054197144],"study_design_scores_gemma":[0.0012878166,0.0005544947,0.028977247,0.000010583381,0.000024751049,0.000034406676,0.000030782492,0.00060768664,0.96080285,0.0071124574,0.00044430868,0.00011262067],"about_ca_topic_score_codex":0.000076197,"about_ca_topic_score_gemma":0.0000044580356,"teacher_disagreement_score":0.076261744,"about_ca_system_score_codex":0.000110151064,"about_ca_system_score_gemma":0.0001470532,"threshold_uncertainty_score":0.47541457},"labels":[],"label_agreement":null},{"id":"W120626927","doi":"10.1007/978-1-60761-594-1_21","title":"Assay Systems for Measurement of Anti-inflammatory Activity","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IDELIX Software (Canada)","funders":"","keywords":"Antimicrobial; Oxazolone; Inflammation; In vivo; Antimicrobial peptides; Anti-inflammatory; Chemistry; Immunology; Pharmacology; Medicine; Biology; Organic chemistry; Biotechnology","score_opus":0.030857436189325245,"score_gpt":0.337907466569402,"score_spread":0.3070500303800768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W120626927","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1159871,0.003039406,0.87924236,0.00015524508,0.0006478755,0.00046205168,0.000022900387,0.000029813045,0.0004132279],"genre_scores_gemma":[0.9247358,0.00006720587,0.074902795,0.00010286201,0.000021889677,0.00003086967,0.000014795201,0.000013593597,0.00011020804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975933,0.0013911792,0.00034699764,0.00029911535,0.000023528612,0.0003458693],"domain_scores_gemma":[0.9992037,0.00021485382,0.00020170279,0.00026231032,0.000104735875,0.0000127313315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025331113,0.00017371627,0.0005359177,0.00014832639,0.000050397157,0.0000053691615,0.00019157506,0.0003457802,0.000014371984],"category_scores_gemma":[0.00035714483,0.00015523333,0.00015215941,0.00009003121,0.00018098178,0.00003095797,0.00003837917,0.00018827847,0.0000039813394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008802943,0.00010489071,0.00041124283,0.000037175636,0.00007842457,0.0000018783002,0.00003535779,0.000054467557,0.97558194,0.008133068,0.00013653598,0.015337005],"study_design_scores_gemma":[0.0007328282,0.0002906713,0.001524363,0.000043230095,0.000026591882,0.000012927685,0.000044168173,0.000035168494,0.9896826,0.0013919696,0.006042295,0.00017316127],"about_ca_topic_score_codex":0.000061681385,"about_ca_topic_score_gemma":0.0000034563693,"teacher_disagreement_score":0.80874866,"about_ca_system_score_codex":0.00004961297,"about_ca_system_score_gemma":0.000057322733,"threshold_uncertainty_score":0.63302314},"labels":[],"label_agreement":null},{"id":"W120656439","doi":"10.1007/978-1-61779-089-8_10","title":"Pyrosequencing of Chaperonin-60 (cpn60) Amplicons as a Means of Determining Microbial Community Composition","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Pyrosequencing; Amplicon; Biology; Computational biology; Species richness; DNA sequencing; Microbial population biology; Metagenomics; Evolutionary biology; Genetics; Ecology; Polymerase chain reaction; Gene; Bacteria","score_opus":0.05331309830342421,"score_gpt":0.35836779180976175,"score_spread":0.3050546935063375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W120656439","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8939064,0.000023432884,0.10110284,0.000012655069,0.00008052195,0.00014408863,0.000010772201,0.000010658773,0.0047085956],"genre_scores_gemma":[0.68785036,0.000007688395,0.31189072,0.00021068235,0.0000024347087,0.0000066549123,0.000019304063,0.000007783045,0.0000043793484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9942845,0.0048219077,0.00041538154,0.00018168135,0.000029838648,0.00026667395],"domain_scores_gemma":[0.9989208,0.00036189498,0.00019607553,0.00046896038,0.000014868246,0.00003737468],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015399567,0.0001433455,0.00040355127,0.00009024656,0.0001135745,0.0000013239552,0.0005200342,0.00024986084,0.0011670897],"category_scores_gemma":[0.00013228296,0.00014858234,0.00009014163,0.00019141831,0.0010640514,0.000034183024,0.0005388423,0.0005017826,0.000013498632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006007909,0.00016684191,0.007641438,0.0000128758375,0.000018652247,0.0000046617192,0.00300855,0.000103375525,0.98604727,0.0008934467,0.000004468406,0.0020383354],"study_design_scores_gemma":[0.00037173266,0.0005834504,0.01510247,0.000022905566,0.000019906203,0.0000344432,0.00022050529,0.00010288002,0.97005904,0.013247966,0.000078975456,0.00015574157],"about_ca_topic_score_codex":0.005115129,"about_ca_topic_score_gemma":0.0011361272,"teacher_disagreement_score":0.21078789,"about_ca_system_score_codex":0.000054357777,"about_ca_system_score_gemma":0.00001858059,"threshold_uncertainty_score":0.99974597},"labels":[],"label_agreement":null},{"id":"W1210598802","doi":"10.1007/978-1-60327-058-8_20","title":"High Throughput Methods for Analyzing Transition Metals in Proteins on a Microgram ScaleHigh Throughput Methods for Analyzing Transition Metals in Proteins on a Microgram Scale","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chemistry; Transition metal; Cofactor; Metalloprotein; Metal; Nanotechnology; Combinatorial chemistry; Chromatography; Biological system; Materials science; Biochemistry; Biology; Enzyme; Organic chemistry","score_opus":0.03472153301279973,"score_gpt":0.4184945585263904,"score_spread":0.38377302551359066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1210598802","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037596095,0.0012857928,0.9540991,0.0011967167,0.00008286321,0.005047221,0.00016756108,0.00025774495,0.0002669129],"genre_scores_gemma":[0.039492246,0.00031312395,0.9475559,0.0004200266,0.00010665398,0.011461224,0.00045719725,0.0001540479,0.000039552844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9910255,0.0036153465,0.0018216487,0.0020144752,0.00018287131,0.0013401433],"domain_scores_gemma":[0.99643624,0.0015211707,0.0005485053,0.0011544015,0.00017737735,0.00016231969],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.007303113,0.0008899164,0.0020354644,0.0012973291,0.00028170148,0.00006910469,0.0006999795,0.0011412137,0.00011509139],"category_scores_gemma":[0.00067398115,0.0008831226,0.001017106,0.0023063002,0.0003769024,0.00014456744,0.00008641119,0.0010608438,0.0000015607371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039609548,0.0010609035,0.00004717294,0.0002917388,0.00020657701,0.000013921826,0.00052205607,0.0005170837,0.8865829,0.005879027,0.0000066107373,0.10447591],"study_design_scores_gemma":[0.00241481,0.00086694135,0.00006710105,0.00025142357,0.00022878518,0.000040200695,0.00010237132,0.006200573,0.9358632,0.049236156,0.0038703957,0.00085802353],"about_ca_topic_score_codex":0.00065957854,"about_ca_topic_score_gemma":0.00014001806,"teacher_disagreement_score":0.103617884,"about_ca_system_score_codex":0.0005178652,"about_ca_system_score_gemma":0.00011483871,"threshold_uncertainty_score":0.99936193},"labels":[],"label_agreement":null},{"id":"W122755776","doi":"10.1007/978-1-59745-060-7_18","title":"Bone Marrow-Derived Mesenchymal Stem Cells: Isolation, Expansion, Characterization, Viral Transduction, and Production of Conditioned Medium","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":290,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Mesenchymal stem cell; Cell biology; Clinical uses of mesenchymal stem cells; Paracrine signalling; Bone marrow; Biology; Stem cell transplantation for articular cartilage repair; Cell sorting; Stem cell; Immunology; Adult stem cell; Endothelial stem cell; In vitro; Flow cytometry","score_opus":0.03470971677383803,"score_gpt":0.35494151683973985,"score_spread":0.3202318000659018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W122755776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63693094,0.0003834989,0.36046046,0.0011525168,0.00034224067,0.00063801504,0.000006507094,0.000030653584,0.00005516457],"genre_scores_gemma":[0.71467024,0.00078177697,0.28315663,0.00017342232,0.00013394773,0.00011474572,0.00020486803,0.000047097707,0.00071724737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99663365,0.0014296187,0.00075033016,0.0005893646,0.00025854903,0.0003384718],"domain_scores_gemma":[0.99872565,0.00012371197,0.00020925456,0.00038251275,0.00041955692,0.00013930252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014659289,0.00021924311,0.00060132146,0.0004616117,0.00010947268,0.0000051593506,0.000093046896,0.00028773473,0.0001734246],"category_scores_gemma":[0.00035796734,0.00020254354,0.00008147297,0.0005595941,0.0005393757,0.0000952707,0.000049961815,0.00029586747,0.000004279582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024843437,0.0001270265,0.007965768,0.00013538252,0.00004335023,0.00004251838,0.00071070576,0.000009764122,0.9875592,0.00021060242,0.000029912255,0.0029173412],"study_design_scores_gemma":[0.0011209062,0.00039880976,0.025301682,0.000047681686,0.000037497535,0.0003559805,0.00013837276,0.00031540712,0.97102237,0.0005186294,0.00057193264,0.00017070715],"about_ca_topic_score_codex":0.00002907605,"about_ca_topic_score_gemma":0.0000030988042,"teacher_disagreement_score":0.077739306,"about_ca_system_score_codex":0.00006064502,"about_ca_system_score_gemma":0.0001785888,"threshold_uncertainty_score":0.82594854},"labels":[],"label_agreement":null},{"id":"W122810863","doi":"10.1007/978-1-59745-245-8_19","title":"RNA Isolation and Real-Time Quantitative RT-PCR","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"","keywords":"Real-time polymerase chain reaction; Isolation (microbiology); Computational biology; RNA; RNA extraction; Biology; Computer science; Microbiology; Genetics; Gene","score_opus":0.026240095294140026,"score_gpt":0.4022161186075505,"score_spread":0.3759760233134105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W122810863","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28928417,0.00067972846,0.7066476,0.00018991635,0.00003449199,0.0002760358,0.000011158457,0.00003139173,0.0028455374],"genre_scores_gemma":[0.069769576,0.0012981243,0.92783135,0.0004302616,0.00003579501,0.00013281073,0.00019298636,0.00003307761,0.00027599355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793816,0.0007596748,0.00032428454,0.00061867444,0.00004714169,0.0003120402],"domain_scores_gemma":[0.99923426,0.000060337083,0.000115873765,0.0004451325,0.00006958716,0.00007483293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061424257,0.00022073409,0.00027846138,0.00012645056,0.00010472272,0.000006427822,0.00020373109,0.00041146876,0.00002127141],"category_scores_gemma":[0.00023741176,0.0002168397,0.000087685876,0.00019583628,0.00038610827,0.0000030443014,0.000187038,0.00015006676,0.0000084505255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038957463,0.0000396691,0.0020890706,0.0000040919767,0.000028846473,0.000010214039,0.000035678437,0.000007557991,0.986854,0.008075364,0.00014657778,0.0026699493],"study_design_scores_gemma":[0.00058988284,0.00068082113,0.003341826,0.00000956866,0.00001946022,0.00013433474,0.000025146275,0.00058347353,0.97357184,0.0078976415,0.012705245,0.00044077405],"about_ca_topic_score_codex":0.0000730936,"about_ca_topic_score_gemma":0.000008273789,"teacher_disagreement_score":0.22118382,"about_ca_system_score_codex":0.0000150642845,"about_ca_system_score_gemma":0.000049011844,"threshold_uncertainty_score":0.88424665},"labels":[],"label_agreement":null},{"id":"W123830554","doi":"10.1007/978-1-62703-357-2_20","title":"Thiopurine S-Methyltransferase Pharmacogenetics in Childhood Acute Lymphoblastic Leukemia","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"McGill University","keywords":"Thiopurine methyltransferase; Pharmacogenetics; Medicine; Pharmacology; Toxicity; Pharmacogenomics; Genotype; Azathioprine; Internal medicine; Biology; Gene; Disease; Genetics","score_opus":0.014104208968826588,"score_gpt":0.3752610942479126,"score_spread":0.361156885279086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W123830554","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54638016,0.0006972905,0.44955358,0.000717932,0.00019415477,0.0011059284,0.000010359879,0.000057000456,0.0012835922],"genre_scores_gemma":[0.30968344,0.0004990913,0.6866739,0.002342987,0.0000975933,0.00036707,0.00005542366,0.0000898131,0.00019068648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957986,0.0013943394,0.0007568382,0.00077681727,0.00025730705,0.0010161345],"domain_scores_gemma":[0.99819595,0.0006563564,0.000071234994,0.0006333856,0.00012797635,0.0003150993],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011574505,0.00040231482,0.000818021,0.0007578489,0.00003593354,0.000020398707,0.00041228245,0.00045564616,0.00057748414],"category_scores_gemma":[0.00088632514,0.00035128533,0.00016889657,0.0010095277,0.00030003407,0.000051542946,0.00021740286,0.00075694325,0.00015288066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014707336,0.0002441423,0.0072025512,0.000053724743,0.00017384934,0.000788471,0.00018786987,0.00013767293,0.946672,0.00031712995,0.00008130959,0.043994162],"study_design_scores_gemma":[0.017989434,0.0011670981,0.04072086,0.00016582484,0.00025008843,0.0009907875,0.00009585039,0.015713815,0.9128438,0.007978348,0.0012993251,0.00078475825],"about_ca_topic_score_codex":0.0004343818,"about_ca_topic_score_gemma":0.000011398934,"teacher_disagreement_score":0.23712032,"about_ca_system_score_codex":0.0011187514,"about_ca_system_score_gemma":0.00090976333,"threshold_uncertainty_score":0.9998939},"labels":[],"label_agreement":null},{"id":"W124230207","doi":"10.1007/978-1-62703-586-6_14","title":"Phage Display Technology for Human Monoclonal Antibodies","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tufts University School of Medicine; Centro Singular de Investigación de Galicia; Uppsala Universitet; Technische Universität Braunschweig; Japan Society for the Promotion of Science; National Institute of Diabetes and Digestive and Kidney Diseases; University of Tokyo; Università degli Studi del Piemonte Orientale; Hebrew University of Jerusalem; Eidgenössische Technische Hochschule Zürich; University of Toronto; Chugai Pharmaceutical","keywords":"Phage display; Monoclonal antibody; Phagemid; Selection (genetic algorithm); Antibody; Biology; Computational biology; Effector; Function (biology); Negative selection; Hybridoma technology; Gene; Genetics; Bacteriophage; Computer science; Immunology; Escherichia coli; Artificial intelligence; Genome","score_opus":0.04003425364022478,"score_gpt":0.4734810811312822,"score_spread":0.4334468274910574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W124230207","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6004429,0.0018168637,0.38828743,0.0051376135,0.0001497113,0.0011516832,0.000020459955,0.000068252106,0.0029251194],"genre_scores_gemma":[0.085248485,0.000081132996,0.9109444,0.0008067064,0.000102442216,0.00046882985,0.000094255294,0.00003505702,0.0022187121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981377,0.0002904328,0.00038536385,0.00046816948,0.00009808944,0.00062020833],"domain_scores_gemma":[0.99906456,0.00027563603,0.00006515797,0.00033599857,0.00014558814,0.000113039685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000641794,0.00022217643,0.0005482393,0.00048343156,0.00010024456,0.000013083419,0.00024276928,0.00032718093,0.00027859843],"category_scores_gemma":[0.0004265359,0.00017170102,0.0001747393,0.00032844627,0.0004597111,0.00002885037,0.00018487472,0.00037576756,0.00004525357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006362909,0.00010787535,0.033904847,0.00007534377,0.000077037424,0.000042671338,0.000027324635,0.0000010201992,0.87939554,0.04662434,0.00018406917,0.039496295],"study_design_scores_gemma":[0.0023903325,0.0015324544,0.020605696,0.00007843208,0.00005708865,0.00020509823,0.00010951944,0.0010457585,0.7286226,0.20309295,0.041794732,0.00046530177],"about_ca_topic_score_codex":0.0001877472,"about_ca_topic_score_gemma":0.000011451028,"teacher_disagreement_score":0.5226569,"about_ca_system_score_codex":0.00003904045,"about_ca_system_score_gemma":0.000048940958,"threshold_uncertainty_score":0.7001765},"labels":[],"label_agreement":null},{"id":"W124285175","doi":"10.1007/978-1-60761-817-1_1","title":"Detection of Adenoviruses","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Calgary","funders":"","keywords":"Serotype; Virology; Multiplex; Biology; Multiplex polymerase chain reaction; Virus; Real-time polymerase chain reaction; Respiratory tract infections; Chlamydia trachomatis; Polymerase chain reaction; Respiratory system; Gene; Bioinformatics; Genetics","score_opus":0.026353158475127824,"score_gpt":0.4221673722435623,"score_spread":0.3958142137684345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W124285175","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7356939,0.0004900699,0.26310825,0.000034319542,0.0001958722,0.00013504179,0.0000037978077,0.0000072822395,0.00033147447],"genre_scores_gemma":[0.8054877,0.000065660126,0.19406606,0.00017746628,0.00007623853,0.00004017636,0.000016055523,0.000027537633,0.00004309785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831027,0.0007355494,0.00025519324,0.00035426614,0.000069309244,0.00027542436],"domain_scores_gemma":[0.99923277,0.000048295482,0.00007719684,0.0005107092,0.00007872782,0.000052302097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001194203,0.00013440907,0.00019443486,0.000161056,0.000024747273,0.0000047182966,0.00030039094,0.00033685393,0.000031195763],"category_scores_gemma":[0.00058349123,0.00013058807,0.00009490544,0.00021476737,0.00023787,0.0000013921989,0.00012727267,0.00028342102,0.0000033490714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037005596,0.000046951853,0.0015784445,0.0000069355433,0.000026289938,0.0000024816927,0.000011005861,0.000012810904,0.94893897,0.00021667038,0.000002990031,0.048786398],"study_design_scores_gemma":[0.00039687112,0.0012488884,0.00045272798,0.0000021325259,0.0000047349863,0.000010596038,0.000011421401,0.000034060686,0.9918379,0.0011230565,0.0047492045,0.00012838449],"about_ca_topic_score_codex":0.000029751418,"about_ca_topic_score_gemma":0.0003343083,"teacher_disagreement_score":0.06979381,"about_ca_system_score_codex":0.000006901486,"about_ca_system_score_gemma":0.000063981664,"threshold_uncertainty_score":0.53252274},"labels":[],"label_agreement":null},{"id":"W124964997","doi":"10.1007/978-1-4939-2020-4_11","title":"Chemical Posttranslational Modification of Phage-Displayed Peptides","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Glycomics Centre","funders":"","keywords":"Phage display; Peptide library; Computational biology; Peptide; Combinatorial chemistry; Chemistry; Chemical library; Chemical biology; Biochemistry; Phagemid; ENCODE; Biology; Peptide sequence; Small molecule; Gene; Bacteriophage; Escherichia coli","score_opus":0.11853404560899526,"score_gpt":0.5409063608652095,"score_spread":0.4223723152562142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W124964997","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000068371155,0.8388694,0.15893394,0.00011153996,0.0000674915,0.00051790936,0.0000433473,0.0000107310825,0.0013772956],"genre_scores_gemma":[0.00001289786,0.62568074,0.37328807,0.000058578076,0.000075333985,0.00005038726,0.0005996237,0.00002648073,0.00020787134],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99683386,0.0014197893,0.0008224665,0.00045149174,0.00017508512,0.0002972854],"domain_scores_gemma":[0.9984199,0.0008015238,0.00022580614,0.00035777854,0.00010015848,0.0000948426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012813983,0.00029047282,0.0018357802,0.0004769102,0.000016750972,0.000003654541,0.00024781615,0.0005641294,0.0000985378],"category_scores_gemma":[0.000502625,0.00021605186,0.00054627896,0.0004213682,0.00028275183,0.000009033525,0.000078859026,0.00057140086,0.000019587971],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070177484,0.000107904314,0.00003133798,0.007912845,0.0001842951,0.000019454841,0.000014149669,6.6966555e-7,0.07965132,0.009090729,0.000019660029,0.9028975],"study_design_scores_gemma":[0.00046028962,0.00023904328,0.000017845457,0.002545181,0.0003784694,0.00016912776,0.0000019675356,0.00017865581,0.008325339,0.002040246,0.98535824,0.0002856029],"about_ca_topic_score_codex":0.000028948001,"about_ca_topic_score_gemma":6.0359963e-7,"teacher_disagreement_score":0.98533857,"about_ca_system_score_codex":0.00004660994,"about_ca_system_score_gemma":0.00028420638,"threshold_uncertainty_score":0.8810339},"labels":[],"label_agreement":null},{"id":"W125238587","doi":"10.1007/978-1-62703-128-8_31","title":"Feeder-Independent Culture Systems for Human Pluripotent Stem Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Induced pluripotent stem cell; Embryonic stem cell; Human Induced Pluripotent Stem Cells; KOSR; Cryopreservation; Biology; Cell biology; Stem cell; Cell culture; Embryo; Genetics","score_opus":0.03882779427638928,"score_gpt":0.3939983264600084,"score_spread":0.3551705321836191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W125238587","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08962278,0.012865014,0.89369917,0.00007227525,0.0011134825,0.0014472147,0.000055429133,0.00002989245,0.0010947677],"genre_scores_gemma":[0.5915081,0.00079032907,0.39682788,0.00056004775,0.001045038,0.0012701794,0.0004603678,0.00021134036,0.0073267105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99588865,0.001564192,0.0005337783,0.0007304401,0.00018510355,0.0010978127],"domain_scores_gemma":[0.998678,0.00006177095,0.0001639683,0.0007113777,0.00013992174,0.0002449129],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026719936,0.00036279552,0.0004606542,0.00017387801,0.00013012184,0.000038152873,0.0005740388,0.000679839,0.000012030528],"category_scores_gemma":[0.00008607027,0.00032620205,0.00025309456,0.00017288359,0.00013863797,0.0000060098214,0.00037434968,0.0002987254,0.000016367088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005852439,0.00015246862,0.001234555,0.000091701055,0.00010289878,0.0000062380873,0.000064130705,0.00017163163,0.99382794,0.0020556669,0.00046463462,0.0017696228],"study_design_scores_gemma":[0.00095768564,0.00042392677,0.00011281424,0.000018347811,0.000026625457,0.00003383374,0.00016072136,0.00014602303,0.8864808,0.00028372873,0.11096331,0.00039218468],"about_ca_topic_score_codex":0.000057877132,"about_ca_topic_score_gemma":0.000008834353,"teacher_disagreement_score":0.5018853,"about_ca_system_score_codex":0.000087317676,"about_ca_system_score_gemma":0.000056547153,"threshold_uncertainty_score":0.999919},"labels":[],"label_agreement":null},{"id":"W125795121","doi":"10.1007/978-1-62703-405-0_13","title":"Absolute Quantitation of Proteins in Human Blood by Multiplexed Multiple Reaction Monitoring Mass Spectrometry","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia; University of Victoria","funders":"Genome British Columbia; University of Victoria; Genome Canada","keywords":"Selected reaction monitoring; Mass spectrometry; Chromatography; Chemistry; Biomarker discovery; Electrospray ionization; Proteomics; Quantitative proteomics; Liquid chromatography–mass spectrometry; Tandem mass spectrometry","score_opus":0.02349034651104057,"score_gpt":0.38640922923849447,"score_spread":0.3629188827274539,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W125795121","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4829508,0.00009443412,0.5163375,0.000022883665,0.000011994494,0.00033258478,0.0000055972323,0.00003226601,0.00021193393],"genre_scores_gemma":[0.34509337,0.000025452235,0.65410995,0.0000038953585,0.000012131993,0.0006859937,0.00002676582,0.000015762293,0.000026701304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988567,0.00013685964,0.0004140635,0.0003160077,0.00005123354,0.00022510087],"domain_scores_gemma":[0.99928796,0.000118824326,0.00020169924,0.00031795655,0.000044835408,0.000028691838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033689995,0.00013227639,0.00023536796,0.00015604307,0.000029911356,0.0000064376923,0.0001754829,0.00022725944,0.000025988018],"category_scores_gemma":[0.00023640826,0.00014474569,0.000051643518,0.00025515357,0.000061189225,0.00005002766,0.000046016772,0.00028493593,0.0000014044612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006079078,0.00009942124,0.009159736,0.000030790572,0.00001077179,9.2678715e-7,0.000030766038,0.000019744704,0.9872444,0.0011254661,8.877808e-7,0.0022709826],"study_design_scores_gemma":[0.0004511477,0.00003870472,0.00084184954,0.00003000854,0.0000059347103,0.0000012935573,0.00005927524,0.00042112215,0.9782618,0.019685771,0.00006972064,0.00013331969],"about_ca_topic_score_codex":0.000718059,"about_ca_topic_score_gemma":0.000009315914,"teacher_disagreement_score":0.13785744,"about_ca_system_score_codex":0.000066294066,"about_ca_system_score_gemma":0.000009417217,"threshold_uncertainty_score":0.5902558},"labels":[],"label_agreement":null},{"id":"W127268081","doi":"10.1007/978-1-62703-074-8_22","title":"Micropropagation of African Violet (Saintpaulia ionantha Wendl.)","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia; University of Guelph","funders":"Ontario Ministry of Agriculture, Food and Rural Affairs","keywords":"Explant culture; Micropropagation; Biology; Organogenesis; Botany; Somatic embryogenesis; Shoot; In vitro; Genetics","score_opus":0.016840795250125287,"score_gpt":0.3498577454839302,"score_spread":0.33301695023380495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W127268081","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31170872,0.0076292707,0.6786385,0.00017606345,0.00040724681,0.00021330961,0.000020451867,0.000009158522,0.0011972649],"genre_scores_gemma":[0.6280357,0.00015901361,0.370902,0.00016772952,0.0001893924,0.00002696512,0.00030674288,0.000016940967,0.00019546057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854493,0.0006109228,0.00027349143,0.00024589893,0.000049350114,0.00027543088],"domain_scores_gemma":[0.9994852,0.000020358802,0.000120536504,0.0002642095,0.000053498818,0.00005620491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073257816,0.00014157995,0.00020391999,0.0000796932,0.000027753376,0.0000033663225,0.00015734592,0.0002697286,0.000018061392],"category_scores_gemma":[0.00020870853,0.0001187499,0.00007601305,0.0001357295,0.00011533061,0.0000032198343,0.00007632876,0.00009277411,0.000004283795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027372917,0.000063110536,0.0028035038,0.000009767594,0.00002663451,0.0000017557189,0.00007596888,0.000018876966,0.9863562,0.0011633208,0.00015607354,0.00929741],"study_design_scores_gemma":[0.00021629492,0.00012057394,0.00084862707,0.000008063469,0.000013928763,0.000032943728,0.000039812076,0.000016680582,0.9401005,0.00024357888,0.0582171,0.00014193232],"about_ca_topic_score_codex":0.000086941254,"about_ca_topic_score_gemma":0.000044047698,"teacher_disagreement_score":0.31632704,"about_ca_system_score_codex":0.000016104219,"about_ca_system_score_gemma":0.000040339408,"threshold_uncertainty_score":0.48424804},"labels":[],"label_agreement":null},{"id":"W127357150","doi":"10.1007/978-1-62703-336-7_30","title":"Separation Science: Principles and Applications for the Analysis of Bionanoparticles by Asymmetrical Flow Field-Flow Fractionation (AF4)","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Field-Flow Fractionation Techniques","field":"Engineering","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"","keywords":"Fractionation; Field flow fractionation; Nanometre; Flow (mathematics); Materials science; Nanotechnology; Range (aeronautics); Component (thermodynamics); Chromatography; Analytical Chemistry (journal); Process engineering; Chemistry; Biological system; Mechanics; Engineering; Physics; Composite material; Thermodynamics","score_opus":0.017648765182650756,"score_gpt":0.3880483320443281,"score_spread":0.37039956686167735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W127357150","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00645204,0.00039013306,0.99191207,0.00045144485,0.000059613492,0.0004943367,0.000011303965,0.000052171374,0.0001768936],"genre_scores_gemma":[0.18776281,0.00009203868,0.8112007,0.00010435476,0.000014199152,0.0007750642,0.000031932235,0.000007199915,0.00001169901],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.999261,0.00009294585,0.00025998507,0.00017907353,0.00008500206,0.00012198335],"domain_scores_gemma":[0.9985398,0.001053141,0.000057963873,0.00017783894,0.0001467893,0.000024436336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007862845,0.00007545044,0.00014408943,0.0004893894,0.000071475224,0.000022697881,0.00013203891,0.000116389325,0.000032830165],"category_scores_gemma":[0.00059645594,0.0000623726,0.00004714,0.0013237562,0.000109014465,0.00010068898,0.000027185522,0.000092958035,8.7147043e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000002884749,0.00002487831,0.00093251094,0.000009251969,0.000088483095,2.4187887e-8,0.000031767024,0.018764941,0.7446963,0.008883413,0.00015362097,0.22641188],"study_design_scores_gemma":[0.000063918356,0.000022571705,0.002994152,9.871043e-7,0.000047348356,3.9153565e-7,0.000017095712,0.60326916,0.38521537,0.004081081,0.004230228,0.00005771244],"about_ca_topic_score_codex":0.000035288092,"about_ca_topic_score_gemma":0.000007198838,"teacher_disagreement_score":0.5845042,"about_ca_system_score_codex":0.00004476941,"about_ca_system_score_gemma":0.00001560166,"threshold_uncertainty_score":0.25434807},"labels":[],"label_agreement":null},{"id":"W127714186","doi":"10.1007/978-1-60761-938-3_10","title":"Measuring the Integrity of the Human Blood–Brain Barrier Using Magnetic Resonance Imaging","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MRI in cancer diagnosis","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Magnetic resonance imaging; Blood–brain barrier; Dynamic contrast-enhanced MRI; Medicine; Contrast (vision); Radiology; Computer science; Central nervous system; Internal medicine","score_opus":0.050495012694170296,"score_gpt":0.4154457386191715,"score_spread":0.3649507259250012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W127714186","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9348715,0.005688426,0.05113138,0.0057595577,0.00071881246,0.0005917278,0.0000071339746,0.000022592047,0.0012088604],"genre_scores_gemma":[0.38401031,0.00003308076,0.6135259,0.0021705835,0.00011427811,0.000054764638,0.0000011665304,0.000035407575,0.000054462715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974203,0.0014659339,0.0003596696,0.00032701457,0.000132814,0.0002942376],"domain_scores_gemma":[0.9983545,0.0005272407,0.00011976864,0.0008631823,0.00009000905,0.000045278262],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030932059,0.00015323101,0.0003186425,0.0000967447,0.00008970811,0.0000075540975,0.00042505562,0.00015197675,0.000120950455],"category_scores_gemma":[0.0020389904,0.00009353583,0.0001374464,0.00034640013,0.0006262661,0.000014711484,0.00023332472,0.0010537877,5.548929e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000070047568,0.000028970218,0.16803217,0.0000172674,0.000009081743,0.000009462012,0.00013433644,0.0000029054513,0.8143531,0.0015988235,0.000024521141,0.01578233],"study_design_scores_gemma":[0.000741153,0.000060312595,0.044367656,0.00013769025,0.00010872475,0.00009603632,0.00006569329,0.00056764396,0.9385847,0.0075250505,0.0076071867,0.00013815763],"about_ca_topic_score_codex":0.00047907955,"about_ca_topic_score_gemma":0.000112983034,"teacher_disagreement_score":0.56239456,"about_ca_system_score_codex":0.00003868198,"about_ca_system_score_gemma":0.00010596526,"threshold_uncertainty_score":0.45782417},"labels":[],"label_agreement":null},{"id":"W128683111","doi":"10.1007/978-1-61779-204-5_3","title":"The Proprotein Convertases, 20 Years Later","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Proprotein Convertases; Computational biology; Biology; Endocrinology","score_opus":0.03009515244197118,"score_gpt":0.3979223719370876,"score_spread":0.36782721949511643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W128683111","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001957125,0.9816965,0.016010407,0.000015884103,0.0003170788,0.00089237094,0.00007983264,0.000012800457,0.00095559016],"genre_scores_gemma":[0.000003427481,0.9491458,0.04884378,0.00013359063,0.00009109519,0.00054176716,0.00039827236,0.00007588488,0.000766412],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99585056,0.00214355,0.0006126833,0.0007742297,0.00006747212,0.00055149087],"domain_scores_gemma":[0.9984724,0.00009214885,0.000257168,0.0010140598,0.000042706466,0.00012152523],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00081661274,0.0004678969,0.00089880516,0.0000955443,0.00006632026,0.000029560018,0.00074629777,0.00078189245,0.000044204215],"category_scores_gemma":[0.00040736992,0.00030716872,0.00050008076,0.00015763678,0.000367336,0.0000013209145,0.00040892596,0.00040018844,0.000034159726],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033807613,0.00005492766,0.000025115041,0.00064754306,0.00029508024,0.000075455406,0.000007891853,3.6036926e-7,0.0030791187,0.0016760059,0.00038453148,0.9937202],"study_design_scores_gemma":[0.00021604373,0.00012860895,0.0000019033457,0.0001612617,0.0002829656,0.000036991238,0.0000041175317,0.000001699605,0.0032969113,0.0008360174,0.9946439,0.00038953227],"about_ca_topic_score_codex":0.000033961212,"about_ca_topic_score_gemma":0.00002004684,"teacher_disagreement_score":0.9942594,"about_ca_system_score_codex":0.000024828627,"about_ca_system_score_gemma":0.00023776238,"threshold_uncertainty_score":0.9999381},"labels":[],"label_agreement":null},{"id":"W129436484","doi":"10.1007/978-1-62703-709-9_12","title":"Introduction to RNA Secondary Structure Comparison","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer","funders":"","keywords":"Computer science; Nucleic acid secondary structure; Sequence (biology); Nucleic acid structure; Tree (set theory); Base (topology); Theoretical computer science; Algorithm; RNA; Mathematics; Combinatorics; Biology; Genetics","score_opus":0.032469643564554056,"score_gpt":0.40920275406375095,"score_spread":0.3767331104991969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W129436484","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000024335925,0.6589598,0.33889994,0.00007904475,0.00082471245,0.0009492865,0.000040398034,0.000014059442,0.0002083943],"genre_scores_gemma":[0.0000017376767,0.50602955,0.49180987,0.00018360419,0.00084237015,0.0002895346,0.000454941,0.00008050973,0.00030787458],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9940732,0.0031310997,0.0008754761,0.0012727999,0.00009463425,0.00055275415],"domain_scores_gemma":[0.9982386,0.00006884048,0.00035255786,0.0011174023,0.0000708377,0.00015175523],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009942479,0.00064924505,0.0017496675,0.000347929,0.000054069176,0.000036313417,0.0007158906,0.0014862531,0.0004238044],"category_scores_gemma":[0.00059776736,0.0005549085,0.00041067548,0.00034851683,0.000087037086,0.0000026518708,0.0004074979,0.000585585,0.00007472481],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000069812154,0.000015436895,6.6335934e-7,0.00047233675,0.00008410367,0.0000025651852,0.000006484805,0.0000035067528,0.3669327,0.00023782432,0.0008977694,0.6313396],"study_design_scores_gemma":[0.00009732965,0.00024737016,3.3636647e-7,0.00020639297,0.000094985415,0.00003664314,0.000006856831,0.0000012595937,0.17491916,0.00089905784,0.8230035,0.0004871433],"about_ca_topic_score_codex":0.000018101833,"about_ca_topic_score_gemma":0.000008859471,"teacher_disagreement_score":0.8221057,"about_ca_system_score_codex":0.000058922436,"about_ca_system_score_gemma":0.00018223091,"threshold_uncertainty_score":0.99981004},"labels":[],"label_agreement":null},{"id":"W129790567","doi":"10.1007/978-1-60327-317-6_24","title":"A Quantum Dot-Labeled Ligand–Receptor Binding Assay for G Protein-Coupled Receptors Contained in Minimally Purified Membrane Nanopatches","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Calgary","funders":"","keywords":"G protein-coupled receptor; Receptor; Biophysics; Chemistry; Streptavidin; Membrane; Ligand (biochemistry); Quantum dot; Membrane protein; Biochemistry; Nanotechnology; Biology; Biotin; Materials science","score_opus":0.01795633180823193,"score_gpt":0.3285931997800127,"score_spread":0.3106368679717808,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W129790567","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71693873,0.0007716259,0.28004286,0.0003416464,0.0004028488,0.0013755878,0.000017829616,0.00003053589,0.00007836173],"genre_scores_gemma":[0.43179742,0.0001023139,0.56640875,0.00042975665,0.00014523673,0.00045439822,0.00033295027,0.000069186266,0.00026001336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956895,0.001319469,0.0008992375,0.0010628806,0.00013282704,0.0008960619],"domain_scores_gemma":[0.998814,0.00014485657,0.00028542953,0.00048137605,0.0001345815,0.00013977442],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0039383657,0.0004934724,0.00081244175,0.00035847278,0.000092946684,0.000042264994,0.00050003984,0.0008130711,0.000052798037],"category_scores_gemma":[0.0015614534,0.00047277068,0.00027569465,0.00042572463,0.00009735012,0.000008975659,0.00009811479,0.00031105886,0.0000055713226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007672445,0.00016875223,0.00017620198,0.00003443364,0.000059090347,0.000011069881,0.00009867125,0.00003646866,0.99037933,0.002124685,0.000023986468,0.006120076],"study_design_scores_gemma":[0.0028751495,0.0016957897,0.000019890525,0.00007439445,0.000019973688,0.0000068011977,0.00017339733,0.00058660697,0.9880238,0.0025978873,0.0033524998,0.0005737893],"about_ca_topic_score_codex":0.000042497286,"about_ca_topic_score_gemma":0.000034839675,"teacher_disagreement_score":0.2863659,"about_ca_system_score_codex":0.000082772814,"about_ca_system_score_gemma":0.00017171251,"threshold_uncertainty_score":0.99977237},"labels":[],"label_agreement":null},{"id":"W130424176","doi":"10.1007/978-1-61779-120-8_20","title":"CFTR Folding Consortium: Methods Available for Studies of CFTR Folding and Correction","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute","keywords":"Cystic fibrosis; Protein engineering; Mutant; Protein folding; Computational biology; Chemistry; Cell biology; Biology; Biochemistry; Enzyme; Genetics; Gene","score_opus":0.1516975049926398,"score_gpt":0.517496655744553,"score_spread":0.36579915075191316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W130424176","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035326745,0.015338916,0.9470765,0.000056470188,0.0005757243,0.00069773337,0.0000046975624,0.000029964978,0.00089325197],"genre_scores_gemma":[0.007975419,0.0005841766,0.99087846,0.00008526368,0.00002906685,0.00016178002,0.0000050209524,0.000026567439,0.00025421928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99726343,0.0012845842,0.00049770495,0.0004617683,0.00008418749,0.00040829924],"domain_scores_gemma":[0.99680424,0.0024203574,0.00017104702,0.00029318742,0.00022598085,0.0000851772],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0043409867,0.00018037394,0.00075431215,0.00034016208,0.000058727088,0.0000046651858,0.00010376893,0.00015718295,0.000059102742],"category_scores_gemma":[0.011421496,0.00015449483,0.00010403408,0.00031443682,0.00044079768,0.00004390244,0.00015504722,0.00020382529,0.0000012883751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003657169,0.000050246545,0.006037556,0.00023652316,0.00017307152,0.000009134133,0.00035446713,0.0000035082146,0.88818043,0.0012185675,0.000108893546,0.10326188],"study_design_scores_gemma":[0.0012393439,0.0012136402,0.0007711707,0.00017313212,0.00012003296,0.00005564425,0.0007145664,0.0017539437,0.9762629,0.012838749,0.0046962714,0.00016058444],"about_ca_topic_score_codex":0.00008129895,"about_ca_topic_score_gemma":0.000009873593,"teacher_disagreement_score":0.1031013,"about_ca_system_score_codex":0.000071957074,"about_ca_system_score_gemma":0.000063796695,"threshold_uncertainty_score":0.99690574},"labels":[],"label_agreement":null},{"id":"W130693167","doi":"10.1007/978-1-61779-046-1_16","title":"Argonaute Pull-Down and RISC Analysis Using 2’-O-Methylated Oligonucleotides Affinity Matrices","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Argonaute; Oligonucleotide; Biology; RNA; RNA-induced silencing complex; Caenorhabditis elegans; Computational biology; RNA interference; Cell biology; Genetics; DNA; Gene","score_opus":0.0395063375754028,"score_gpt":0.38984701822236256,"score_spread":0.3503406806469598,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W130693167","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6619469,0.001842852,0.33546126,0.0000136357885,0.000041303814,0.00012197684,0.000008195944,0.0000112501375,0.00055263436],"genre_scores_gemma":[0.3684788,0.000391378,0.6308085,0.0001279753,0.000028297327,0.000013934989,0.000036474037,0.000023055585,0.00009159744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99702877,0.0013535664,0.00036874032,0.00064332836,0.00008097327,0.00052464614],"domain_scores_gemma":[0.9991088,0.00006658156,0.00012740277,0.0004650617,0.0000858502,0.00014633461],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016526536,0.00023826883,0.0004238378,0.0004553621,0.00008692497,0.000022909328,0.00030566985,0.00032677452,0.000058422233],"category_scores_gemma":[0.00055842666,0.00021575773,0.0001729628,0.0007692185,0.00023839944,0.0000058895457,0.0003244363,0.00023030146,0.0000032865478],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008887625,0.000047098587,0.02841157,0.000011866567,0.00039185552,0.000028221388,0.000048879647,0.00009072428,0.96505713,0.00025397527,0.000004573249,0.0055652196],"study_design_scores_gemma":[0.0005589747,0.00031717622,0.014116654,0.000009409039,0.00022125556,0.00002740676,0.00009957476,0.003836717,0.9777054,0.0021364542,0.0005644312,0.00040655534],"about_ca_topic_score_codex":0.000633654,"about_ca_topic_score_gemma":0.00009393762,"teacher_disagreement_score":0.29534724,"about_ca_system_score_codex":0.000018063989,"about_ca_system_score_gemma":0.000049712486,"threshold_uncertainty_score":0.8798345},"labels":[],"label_agreement":null},{"id":"W130819592","doi":"10.1007/978-1-61779-591-6_3","title":"DNA Barcodes for Insects","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lepidoptera: Biology and Taxonomy","field":"Biochemistry, Genetics and Molecular Biology","cited_by":162,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Barcode; DNA barcoding; Biology; Mitochondrial DNA; Identification (biology); Cytochrome c oxidase subunit I; Computational biology; Evolutionary biology; Gene; Computer science; Genetics; Ecology","score_opus":0.03250248370586483,"score_gpt":0.37548047604683776,"score_spread":0.3429779923409729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W130819592","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.086871706,0.0029065332,0.90057683,0.00018860275,0.00061054714,0.000416678,0.0000199486,0.000017412998,0.008391745],"genre_scores_gemma":[0.5569609,0.000037218248,0.44145563,0.00095053477,0.00022525903,0.00018511599,0.00010838287,0.000018081904,0.000058889145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786246,0.00080789055,0.00027772968,0.0004074901,0.00002745366,0.00061700534],"domain_scores_gemma":[0.99924123,0.00014578098,0.0000826918,0.0003844808,0.00004374545,0.00010204913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014004996,0.00021807133,0.00027290932,0.00009965154,0.000052331565,0.000006319535,0.0002546666,0.0004807982,0.000019239309],"category_scores_gemma":[0.0007784633,0.00019825934,0.00015237265,0.00010331152,0.00017535874,0.000004119079,0.0001430278,0.00013878607,0.000008136102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009779218,0.000117139236,0.019377826,0.000015976142,0.00006912338,0.0000014425669,0.00004731228,0.000005321823,0.91693467,0.0049706507,0.000070557224,0.058292188],"study_design_scores_gemma":[0.0005333801,0.00028358446,0.00033171722,0.000005583113,0.000016312388,0.000018836,0.000024456618,0.00001590607,0.7299472,0.0024343994,0.26611304,0.00027556357],"about_ca_topic_score_codex":0.000011084964,"about_ca_topic_score_gemma":0.0000073404926,"teacher_disagreement_score":0.4700892,"about_ca_system_score_codex":0.000016652406,"about_ca_system_score_gemma":0.000042778443,"threshold_uncertainty_score":0.8084781},"labels":[],"label_agreement":null},{"id":"W132212696","doi":"10.1007/978-1-59745-385-1_13","title":"Primer on Systematic Review and Meta-Analysis","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Toronto; University of Alberta","funders":"","keywords":"Primer (cosmetics); Meta-analysis; Medicine; Internal medicine; Chemistry","score_opus":0.8278950376810208,"score_gpt":0.6672441089395496,"score_spread":0.16065092874147124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W132212696","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[1.2876756e-8,0.7442691,0.25043985,0.000112245376,0.00005996733,0.0040025697,0.00003868252,0.0000049203372,0.0010726614],"genre_scores_gemma":[2.6653012e-8,0.74924064,0.24530454,0.0013331372,0.00000896034,0.0011060551,0.000033771397,0.000033871715,0.0029390247],"study_design_codex":"systematic_review","study_design_gemma":"meta_analysis","domain_scores_codex":[0.74099,0.23138747,0.022277119,0.0028978214,0.0019729582,0.00047464593],"domain_scores_gemma":[0.95384455,0.02110074,0.014232662,0.0100644445,0.00054628914,0.00021131743],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","insufficient_payload"],"consensus_categories":["metaresearch","metaepi_narrow","metaepi_broad","insufficient_payload"],"category_scores_codex":[0.20953363,0.0013825088,0.09209488,0.002900038,0.000087039996,0.00021061435,0.0035706367,0.0007090046,0.004715031],"category_scores_gemma":[0.101979315,0.00054389477,0.031523533,0.007504632,0.00019953132,0.000041274016,0.0004540779,0.00073303765,0.0010970148],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[6.1099666e-7,0.00007238018,0.0000028727327,0.53701085,0.41064388,0.00007955331,0.000029093837,0.0000034679128,0.0000010269812,0.004110107,0.00146072,0.04658547],"study_design_scores_gemma":[0.000021246316,0.000025996698,1.4119519e-7,0.0036538506,0.63822466,0.000073800955,0.0000029246378,0.000011924179,4.7969115e-7,0.000952162,0.35668477,0.00034803824],"about_ca_topic_score_codex":0.000009044009,"about_ca_topic_score_gemma":0.000004149977,"teacher_disagreement_score":0.53335696,"about_ca_system_score_codex":0.000066640474,"about_ca_system_score_gemma":0.00011893093,"threshold_uncertainty_score":0.99989253},"labels":[],"label_agreement":null},{"id":"W132339932","doi":"10.1007/978-1-59745-548-0_11","title":"Use of the Comet Assay in Environmental Toxicology","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carcinogens and Genotoxicity Assessment","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Comet assay; Genotoxicity; DNA damage; Comet; Toxicology; Chemistry; Biology; DNA; Toxicity; Biochemistry; Astrobiology","score_opus":0.03509555835763363,"score_gpt":0.35278490417538566,"score_spread":0.31768934581775204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W132339932","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.901674,0.00035931618,0.09728905,0.00012566046,0.0001451665,0.00024507148,0.000024551302,0.000002251784,0.00013499094],"genre_scores_gemma":[0.843949,0.00016679043,0.15501346,0.00066260004,0.00001857352,0.000032438882,0.00003020857,0.000014895894,0.00011203542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973385,0.0016179098,0.00034052928,0.00035538952,0.0000689336,0.00027873536],"domain_scores_gemma":[0.9992807,0.00008611718,0.000101961436,0.0004860037,0.000011194325,0.000034041586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069529074,0.00015093225,0.0002706356,0.00010240736,0.000033709883,0.0000024972708,0.0002650068,0.00028322468,0.000027712138],"category_scores_gemma":[0.0002315573,0.00012309477,0.00013506041,0.00017340772,0.00035784545,0.0000018437096,0.00033512217,0.00017841868,0.0000010326963],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029181849,0.000119364035,0.15433162,0.0000030419158,0.000019250276,0.000012918229,0.00003173548,0.00019845455,0.84371156,0.00017862921,0.000034979224,0.0013292878],"study_design_scores_gemma":[0.00043697024,0.00020433337,0.11564493,0.0000039472025,0.0000065474983,0.000057379842,0.000023889967,0.00009096259,0.8756794,0.00026439046,0.0074435812,0.00014369863],"about_ca_topic_score_codex":0.00007091511,"about_ca_topic_score_gemma":0.00014247696,"teacher_disagreement_score":0.05772494,"about_ca_system_score_codex":0.000039118608,"about_ca_system_score_gemma":0.000055665223,"threshold_uncertainty_score":0.5019659},"labels":[],"label_agreement":null},{"id":"W132728405","doi":"10.1007/978-1-62703-239-1_2","title":"Senescence Regulation by mTOR","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nautical Research Society","funders":"","keywords":"PI3K/AKT/mTOR pathway; Senescence; Regulator; Master regulator; Mechanistic target of rapamycin; Cell biology; Suppressor; Biology; Mechanism (biology); Neuroscience; Signal transduction; Genetics; Cancer; Transcription factor; Gene; Epistemology","score_opus":0.0776703045340501,"score_gpt":0.4690851905269426,"score_spread":0.3914148859928925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W132728405","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000034564853,0.7306759,0.26774672,0.000041921503,0.00048127226,0.0006311371,0.000018252633,0.000049311086,0.00035204375],"genre_scores_gemma":[0.0000023492667,0.6791303,0.31964526,0.00018253435,0.00014839345,0.000084126346,0.00031472588,0.00005892327,0.00043341223],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950479,0.002563713,0.00086337957,0.00074299896,0.00014697561,0.00063500216],"domain_scores_gemma":[0.9981624,0.0003867537,0.00035017205,0.0008357743,0.000063798594,0.00020110831],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016297132,0.00053197244,0.0022624736,0.0004085336,0.000038701713,0.00000990943,0.00029110347,0.0010705041,0.00016657171],"category_scores_gemma":[0.0005417445,0.00042898752,0.00042210473,0.000659313,0.00021506308,0.00003119643,0.00011971992,0.0007043532,0.00006858341],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011118471,0.00007791299,0.00012925542,0.0033216584,0.00007129852,0.000032879718,0.000022499707,4.095094e-8,0.0143602565,0.0004249756,0.00012022382,0.9814279],"study_design_scores_gemma":[0.00024477142,0.000088145294,0.00003262139,0.0020116619,0.0005403307,0.00020836674,0.000004795384,0.0000053680287,0.0015333418,0.00020368744,0.99471986,0.00040704387],"about_ca_topic_score_codex":0.000038221646,"about_ca_topic_score_gemma":0.0000017861498,"teacher_disagreement_score":0.99459964,"about_ca_system_score_codex":0.00018419488,"about_ca_system_score_gemma":0.00020918048,"threshold_uncertainty_score":0.9998162},"labels":[],"label_agreement":null},{"id":"W132936999","doi":"10.1007/978-1-59745-548-0_16","title":"Application of Suppressive Subtractive Hybridization to Uncover the Metagenomic Diversity of Environmental Samples","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Semtech (Canada)","funders":"","keywords":"Metagenomics; Biology; Fosmid; Suppression subtractive hybridization; Computational biology; Genome; Genetics; Environmental DNA; Gene; Biodiversity; Ecology","score_opus":0.01883262359934448,"score_gpt":0.30622031201690963,"score_spread":0.2873876884175652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W132936999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62188905,0.00053979334,0.37721404,0.000026478845,0.00003161901,0.0001820141,0.00005931345,4.997578e-7,0.000057214795],"genre_scores_gemma":[0.89847124,0.00018602655,0.10118209,0.00007924373,0.000015086899,0.000019735371,0.000030647658,0.000007512756,0.0000084465355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901927,0.00035300848,0.00020628513,0.00025048273,0.00004913944,0.00012183312],"domain_scores_gemma":[0.99946177,0.000066362765,0.0001399454,0.0002810754,0.000029119014,0.000021700107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003114571,0.000101769794,0.00019065411,0.000047089703,0.0000650996,8.325736e-7,0.00021576589,0.00008042942,0.0000044016697],"category_scores_gemma":[0.00010691833,0.000084194784,0.00007646848,0.0000760641,0.00021027545,5.45029e-7,0.00041609726,0.0000465759,6.617877e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054629287,0.000041588693,0.05006777,0.0000033553342,0.00007194697,5.4143595e-7,0.00024877183,0.0007581871,0.9463912,0.0002224482,0.000006577012,0.002132958],"study_design_scores_gemma":[0.0001903183,0.0001469298,0.10495688,0.0000010201476,0.0000214719,0.00000448188,0.0000842365,0.000023485498,0.89251614,0.0005641452,0.0014100634,0.0000808505],"about_ca_topic_score_codex":0.00010530696,"about_ca_topic_score_gemma":0.000014049045,"teacher_disagreement_score":0.27658218,"about_ca_system_score_codex":0.000011185669,"about_ca_system_score_gemma":0.000020055211,"threshold_uncertainty_score":0.34333634},"labels":[],"label_agreement":null},{"id":"W132945522","doi":"10.1007/978-1-62703-386-2_5","title":"Global Proteomic Profiling and Enrichment Maps of Dilated Cardiomyopathy","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Profiling (computer programming); Computational biology; Gene expression profiling; Computer science; Biology; Gene; Genetics; Gene expression","score_opus":0.00855222204033851,"score_gpt":0.30886693601754633,"score_spread":0.3003147139772078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W132945522","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43860468,0.0020397268,0.5577875,0.000053106945,0.00011352659,0.0005599177,0.000018916615,0.000006131898,0.00081654824],"genre_scores_gemma":[0.32179537,0.00011840894,0.67764616,0.00017654737,0.00003596165,0.00010102467,0.000094000825,0.000012334096,0.000020151565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986886,0.00032161886,0.00037584055,0.00029223383,0.000042610118,0.0002790915],"domain_scores_gemma":[0.9994446,0.000012824459,0.00012311744,0.0003018442,0.000057228688,0.00006037271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006195304,0.00016344445,0.00027535323,0.000049790935,0.000021889664,0.000010742861,0.00016132301,0.0002716766,0.000005719156],"category_scores_gemma":[0.00007700364,0.00014625344,0.00007240275,0.00013194498,0.00013732539,0.0000025048303,0.00023441136,0.00009065486,0.0000017879875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023913975,0.000022807373,0.019034203,0.000032811982,0.000067507164,0.000001514014,0.000021093387,0.00011053753,0.94696707,0.0018878903,0.000050542123,0.03178009],"study_design_scores_gemma":[0.0018471692,0.00087174645,0.0073646302,0.000039656326,0.000057156434,0.000056370827,0.000118352255,0.002886554,0.9234904,0.058847643,0.0037357642,0.0006845758],"about_ca_topic_score_codex":0.00006499148,"about_ca_topic_score_gemma":0.0000030366807,"teacher_disagreement_score":0.119858734,"about_ca_system_score_codex":0.000017471115,"about_ca_system_score_gemma":0.00003914752,"threshold_uncertainty_score":0.5964042},"labels":[],"label_agreement":null},{"id":"W13328622","doi":"10.1007/978-1-61737-988-8_1","title":"Zygotic Embryo Culture: An Overview","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Zygote; Embryo; Embryo culture; Biology; Biotechnology; Embryonic stem cell; Cell biology; Embryogenesis; Botany; Genetics","score_opus":0.07565339206607498,"score_gpt":0.4622597176035086,"score_spread":0.3866063255374336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W13328622","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007914653,0.9355093,0.06265664,0.000014770407,0.0007292367,0.00055273186,0.000051767787,0.000021560212,0.00045606933],"genre_scores_gemma":[2.4626425e-7,0.7965022,0.19897895,0.00019455061,0.00042307389,0.00012962816,0.0029279464,0.00006434501,0.0007790827],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99533063,0.002418197,0.0006583629,0.0010509184,0.00008090107,0.00046100165],"domain_scores_gemma":[0.9984637,0.00003210747,0.00029296195,0.0010049237,0.00006630951,0.00013998813],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009603823,0.00061791186,0.0013533935,0.00016033485,0.00006934561,0.00003312712,0.0005757721,0.0023366031,0.000029549456],"category_scores_gemma":[0.0003258174,0.0004614471,0.00046893366,0.0002681697,0.00015416316,0.0000037337838,0.00020884733,0.0007778275,0.000023687973],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004532402,0.00006245631,0.0000015022702,0.000810442,0.00008863041,0.0000383591,0.000015841802,0.0000014770969,0.28780168,0.0012730215,0.00026832888,0.7096337],"study_design_scores_gemma":[0.00015990912,0.00021915426,5.16601e-7,0.0004196252,0.00023105669,0.00033286907,0.0000035453468,0.0000039128076,0.010384781,0.0003068613,0.9873669,0.00057085406],"about_ca_topic_score_codex":0.00004324417,"about_ca_topic_score_gemma":0.00030516367,"teacher_disagreement_score":0.9870986,"about_ca_system_score_codex":0.000031201096,"about_ca_system_score_gemma":0.0003132359,"threshold_uncertainty_score":0.99978375},"labels":[],"label_agreement":null},{"id":"W133846272","doi":"10.1007/978-1-60327-009-0_7","title":"Placental and Fetal Steroidogenesis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Aromatase; Cholesterol side-chain cleavage enzyme; Placenta; Hormone; Steroid; Cytochrome P450; Estrogen; Endocrinology; Fetus; Internal medicine; Enzyme; Biology; Chemistry; Pregnancy; Medicine; Biochemistry; Metabolism","score_opus":0.008318902622629227,"score_gpt":0.3474875739787369,"score_spread":0.3391686713561077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W133846272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80230725,0.006568078,0.18944027,0.0001674831,0.00012749528,0.00017726322,0.0000034178647,0.0000143244915,0.0011944121],"genre_scores_gemma":[0.5661328,0.00043371785,0.43221253,0.0009140909,0.00007102753,0.000014210755,0.000060404174,0.000022456365,0.00013877933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854064,0.0005520644,0.0001808708,0.00040157032,0.000037646983,0.00028721266],"domain_scores_gemma":[0.9996147,0.000021368525,0.000043351374,0.00022828582,0.000015054683,0.000077229015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004326009,0.00017106984,0.00019354609,0.00007995656,0.00003547941,0.000009766868,0.0001271079,0.00033522968,0.00000512274],"category_scores_gemma":[0.0000934394,0.00015475418,0.00007188218,0.00010142165,0.000101103775,0.0000016559424,0.000082998646,0.00013777154,0.0000029102932],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007413575,0.000039972503,0.0017728874,0.0000028692368,0.00002485433,0.000020537473,0.000013973354,0.000009532561,0.94238836,0.00048325284,0.000020790021,0.055148855],"study_design_scores_gemma":[0.000794119,0.0007827787,0.0020792251,0.0000065100753,0.0000162818,0.000119252756,0.000019473473,0.00010650265,0.99211985,0.0012285562,0.0024985394,0.00022891659],"about_ca_topic_score_codex":0.000005990288,"about_ca_topic_score_gemma":0.0000014899691,"teacher_disagreement_score":0.24277228,"about_ca_system_score_codex":0.000011572232,"about_ca_system_score_gemma":0.00002154361,"threshold_uncertainty_score":0.6310692},"labels":[],"label_agreement":null},{"id":"W13404829","doi":"10.1007/978-1-62703-727-3_22","title":"A Prognostic Test to Predict the Risk of Metastasis in Uveal Melanoma Based on a 15-Gene Expression Profile","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ocular Oncology and Treatments","field":"Medicine","cited_by":147,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Cancer Institute","keywords":"Medicine; Melanoma; Oncology; Internal medicine; Metastasis; Disease; Clinical trial; Adjuvant; Adjuvant therapy; Pathology; Cancer; Cancer research","score_opus":0.01871194983739567,"score_gpt":0.3667767048026157,"score_spread":0.34806475496522005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W13404829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.871356,0.00032006597,0.12426062,0.00085908355,0.0000947991,0.0024216943,0.000040770286,0.000020891184,0.0006260698],"genre_scores_gemma":[0.518138,0.000005630025,0.4808037,0.00036705766,0.000010114466,0.00061552285,0.000025124473,0.000012925514,0.000021910886],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99662113,0.002268448,0.00035209433,0.0003673815,0.00009922103,0.00029172917],"domain_scores_gemma":[0.9980609,0.0012172551,0.000119625714,0.00046679238,0.000056386267,0.00007908631],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012057826,0.0001790751,0.0004607198,0.0002681088,0.00003090368,0.0000031120323,0.0001486239,0.00021575096,0.00013827966],"category_scores_gemma":[0.0033373246,0.00010656616,0.000103212915,0.0003894971,0.00012224418,0.000012651527,0.00007451813,0.00028599444,0.000025996042],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019214473,0.00067503727,0.6118395,0.000021035188,0.000067550594,0.00008360631,0.000086158354,0.000068737405,0.37035504,0.000023088283,0.000030672654,0.016557438],"study_design_scores_gemma":[0.0027631675,0.004001295,0.31975433,0.00012511823,0.00019577659,0.000017850609,0.00004552327,0.0019406653,0.66992325,0.0009287622,0.0001793996,0.00012487055],"about_ca_topic_score_codex":0.00016786659,"about_ca_topic_score_gemma":0.000018811854,"teacher_disagreement_score":0.35654306,"about_ca_system_score_codex":0.00005583788,"about_ca_system_score_gemma":0.000088114124,"threshold_uncertainty_score":0.4345642},"labels":[],"label_agreement":null},{"id":"W134919535","doi":"10.1007/978-1-62703-128-8_32","title":"Formation of Embryoid Bodies from Human Pluripotent Stem Cells Using AggreWell™ Plates","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Embryoid body; Embryonic stem cell; Induced pluripotent stem cell; Stem cell; Population; Cell biology; Chemistry; Biophysics; Nanotechnology; Biology; Materials science; Medicine; Biochemistry; Gene","score_opus":0.04724876466778445,"score_gpt":0.3879268535835614,"score_spread":0.34067808891577694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W134919535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5758313,0.0037490334,0.41980457,0.000014196859,0.00018247128,0.00020314351,0.000027437705,0.000007177562,0.0001806805],"genre_scores_gemma":[0.6245862,0.00021396634,0.37477142,0.00006844389,0.000107453576,0.000021568676,0.000114174756,0.000034844914,0.00008193276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969936,0.0013296236,0.0005649522,0.0003888869,0.00013902938,0.0005838929],"domain_scores_gemma":[0.99894303,0.00009040906,0.0002512566,0.0005214194,0.00008596766,0.00010793814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013476291,0.00024366402,0.0003843845,0.00019507951,0.00006590641,0.000010767792,0.0003543848,0.00037544314,0.000026138872],"category_scores_gemma":[0.00009605376,0.0002333404,0.00015396082,0.000127435,0.00018985009,0.000010906134,0.00038101283,0.00019130875,0.0000069629923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000465829,0.00009034856,0.0023084264,0.000044127974,0.00005787352,0.000003902175,0.0001651265,0.00019809019,0.99434924,0.00020008066,0.000016995606,0.0025191847],"study_design_scores_gemma":[0.00040184255,0.00015048277,0.00026735783,0.00003530372,0.000024194636,0.0000093338585,0.00013018619,0.00052931154,0.99568987,0.00091679086,0.0016119882,0.00023334206],"about_ca_topic_score_codex":0.00014603593,"about_ca_topic_score_gemma":0.000011415346,"teacher_disagreement_score":0.048754904,"about_ca_system_score_codex":0.000049332255,"about_ca_system_score_gemma":0.000034914377,"threshold_uncertainty_score":0.9515345},"labels":[],"label_agreement":null},{"id":"W135730973","doi":"10.1007/978-1-62703-691-7_6","title":"Medium-Throughput Production of Recombinant Human Proteins: Protein Production in Insect Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Recombinant DNA; Computational biology; Integral membrane protein; Biology; Structural genomics; Protein expression; Protein biosynthesis; Downstream processing; Gene; Membrane protein; Cell biology; Functional genomics; Biochemistry; Genomics; Membrane; Genome; Protein structure","score_opus":0.02020963085602936,"score_gpt":0.3498159938833954,"score_spread":0.32960636302736607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W135730973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9719004,0.00061622594,0.023803357,0.00025339602,0.0011334207,0.0020498966,0.0000019471208,0.000020147809,0.00022122513],"genre_scores_gemma":[0.84509635,0.000096145886,0.15257388,0.000095629664,0.00017746819,0.001311377,0.00005871262,0.000044806588,0.00054561516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665457,0.0014191747,0.0006298939,0.0007994572,0.00010460905,0.0003922783],"domain_scores_gemma":[0.9988872,0.000009869888,0.00025788238,0.0006290593,0.00015110655,0.00006489872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010328784,0.00026055853,0.00036361325,0.00024772095,0.00005894589,0.000012208005,0.00024397521,0.00035789688,0.00005054456],"category_scores_gemma":[0.00067823625,0.00023725194,0.00012306999,0.00037759577,0.00021130247,0.000012737276,0.00017608955,0.00024409033,0.0000064073447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052192532,0.0003356467,0.0021403653,0.00008494585,0.000023953928,0.000002792586,0.00005941513,0.00015036635,0.9918582,0.00011576432,0.00032439543,0.004851994],"study_design_scores_gemma":[0.00046734922,0.0007578751,0.0013188805,0.00008958378,0.000007210411,0.0000103803195,0.00004024981,0.000013048582,0.9877011,0.008230597,0.0011012263,0.00026246524],"about_ca_topic_score_codex":0.0007579379,"about_ca_topic_score_gemma":0.00010722384,"teacher_disagreement_score":0.12877053,"about_ca_system_score_codex":0.000043931297,"about_ca_system_score_gemma":0.00008514179,"threshold_uncertainty_score":0.9674853},"labels":[],"label_agreement":null},{"id":"W137050503","doi":"10.1007/978-1-62703-119-6_4","title":"Design and Screening of siRNAs Against Highly Structured RNA Targets","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Steacie Institute for Molecular Sciences; University of Ottawa","funders":"","keywords":"Small interfering RNA; Trans-acting siRNA; RNA; RNA silencing; Gene silencing; RNA interference; Computational biology; Biology; RNA-induced silencing complex; Gene; Cell biology; Genetics","score_opus":0.02745682220927304,"score_gpt":0.3518773419295528,"score_spread":0.32442051972027974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W137050503","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3422972,0.004488694,0.6527663,0.000023161578,0.00013247316,0.00011605539,0.0000037723703,0.0000043637633,0.00016797335],"genre_scores_gemma":[0.462061,0.00019092011,0.5374077,0.00022457626,0.000045685643,0.000010257289,0.0000260349,0.000013162918,0.00002068774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981141,0.0008724515,0.0002933814,0.00030706087,0.000049993883,0.00036300786],"domain_scores_gemma":[0.9994065,0.000054332777,0.00011542086,0.0002892239,0.00005380563,0.00008072785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009420998,0.00018284246,0.00027208668,0.00010956941,0.000027787553,0.0000057378984,0.00019074853,0.00028676164,0.000008076942],"category_scores_gemma":[0.00022265979,0.00016746843,0.00006945856,0.00010094975,0.00015053949,0.0000045433917,0.00017013162,0.00012432075,8.580957e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007742805,0.00002289653,0.003212193,0.000009446669,0.000056680215,0.0000026297323,0.00006287976,0.00017674723,0.9625261,0.00021043663,0.000031136202,0.033611424],"study_design_scores_gemma":[0.00036418668,0.00024460105,0.0013165657,0.000011034496,0.000014034823,0.000010212777,0.000038361282,0.00019106858,0.99533975,0.00058154436,0.0017028304,0.00018578491],"about_ca_topic_score_codex":0.000014876053,"about_ca_topic_score_gemma":0.0000019696265,"teacher_disagreement_score":0.11976376,"about_ca_system_score_codex":0.0000066089824,"about_ca_system_score_gemma":0.000024088558,"threshold_uncertainty_score":0.68291646},"labels":[],"label_agreement":null},{"id":"W137527113","doi":"10.1007/978-1-62703-505-7_4","title":"A Tissue-Engineered Corneal Wound Healing Model for the Characterization of Reepithelialization","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Cornea; Wound healing; Tissue engineering; Medicine; Biomedical engineering; Ophthalmology; Surgery","score_opus":0.04416964685196841,"score_gpt":0.38773980017300164,"score_spread":0.34357015332103324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W137527113","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16628964,0.00012647825,0.8324159,0.00031283975,0.00010089342,0.0007083145,0.000010182324,0.000011342781,0.0000244375],"genre_scores_gemma":[0.5450756,0.000060812836,0.4538673,0.00033128887,0.000030584655,0.00026234947,0.0001927821,0.000018762872,0.00016057755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99924505,0.0001761845,0.00025033206,0.00015081292,0.00003701509,0.00014059062],"domain_scores_gemma":[0.99941254,0.00021457598,0.00008221851,0.0001806298,0.000082548,0.000027488208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043725703,0.000084911015,0.00022924556,0.000075204465,0.000025400986,0.000004195864,0.00004764357,0.00010399013,0.000020772037],"category_scores_gemma":[0.00026227275,0.000059457303,0.000052933097,0.00014716509,0.000039322305,0.000020519532,0.00001772852,0.000058127695,0.0000013908124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006387535,0.00004925752,0.0011634523,0.000028861396,0.000040704166,0.0000011738521,0.00009876767,0.0004166359,0.9278561,0.0012551759,0.0000023107914,0.069023676],"study_design_scores_gemma":[0.0011264833,0.0002571289,0.008446499,0.00003944114,0.000099644625,0.000011881952,0.000013579898,0.44043255,0.54262596,0.0063477224,0.0004905902,0.00010850595],"about_ca_topic_score_codex":0.000059810427,"about_ca_topic_score_gemma":0.0000020633959,"teacher_disagreement_score":0.4400159,"about_ca_system_score_codex":0.000023774664,"about_ca_system_score_gemma":0.000029550813,"threshold_uncertainty_score":0.24245985},"labels":[],"label_agreement":null},{"id":"W137573149","doi":"10.1007/978-1-60327-394-7_6","title":"Rapid Identification of Linear Protein Domain Binding Motifs Using Peptide SPOT Arrays","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"National Cancer Institute; National Medical Research Council; National Health and Medical Research Council; Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"Peptide; Computational biology; Function (biology); Protein–protein interaction; Biology; Chemistry; Biochemistry; Cell biology","score_opus":0.057653226896483535,"score_gpt":0.4479373564104751,"score_spread":0.39028412951399155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W137573149","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002296407,0.39054793,0.60823065,0.000009607014,0.000044178498,0.00082969834,0.00004019002,0.000018567756,0.000049540722],"genre_scores_gemma":[0.000010000518,0.38041827,0.61895764,0.000017480856,0.00007162586,0.0000767311,0.00035713578,0.00004836926,0.000042754684],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99616283,0.0012930019,0.0011835025,0.0008802467,0.000087669476,0.00039274056],"domain_scores_gemma":[0.99785995,0.000044322394,0.0009260844,0.001011206,0.000096585594,0.00006185485],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015358253,0.00046365344,0.0011663338,0.0003383023,0.00007437447,0.000011255091,0.0005062624,0.00091834227,0.0000035845978],"category_scores_gemma":[0.0003247303,0.00043807426,0.00046540433,0.0005258788,0.00021803137,0.000002923487,0.0002000087,0.0003717509,0.0000023132975],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000051227275,0.000041592433,4.855293e-7,0.00038398185,0.00003544462,0.0000030957085,0.0000038969733,0.000010813705,0.67500275,0.0005307307,0.0000035594517,0.3239785],"study_design_scores_gemma":[0.00014882666,0.00016334912,3.6598453e-7,0.0011330431,0.0001260961,0.000051351875,0.000009472919,0.00006201413,0.48445985,0.003576318,0.5097754,0.0004939354],"about_ca_topic_score_codex":0.000008202379,"about_ca_topic_score_gemma":0.000001416599,"teacher_disagreement_score":0.5097718,"about_ca_system_score_codex":0.00007279434,"about_ca_system_score_gemma":0.0001569386,"threshold_uncertainty_score":0.9998071},"labels":[],"label_agreement":null},{"id":"W138584467","doi":"10.1007/978-1-4939-0357-3_1","title":"General In Vitro Caspase Assay Procedures","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Caspase; Recombinant DNA; Apoptosis; In vitro; Cell biology; Substrate (aquarium); Caspase 3; Chemistry; Biochemistry; Computational biology; Biology; Programmed cell death","score_opus":0.010890333665579064,"score_gpt":0.34563649140570146,"score_spread":0.3347461577401224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W138584467","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26831895,0.00047174003,0.7300112,0.00010812022,0.00018891806,0.00017169796,0.0000025571694,0.00000894964,0.0007178615],"genre_scores_gemma":[0.39385507,0.00006902383,0.6048401,0.0005594288,0.00012987097,0.000056285546,0.00012783665,0.000026673131,0.00033572852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997672,0.0011665812,0.0002832633,0.00048727545,0.000053617114,0.0003372678],"domain_scores_gemma":[0.99947226,0.00003545745,0.000070059825,0.00033432175,0.000032175176,0.000055697546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014661556,0.00017932549,0.00023571105,0.00014902894,0.000026495978,0.000009597752,0.00017628126,0.00035849036,0.00001183125],"category_scores_gemma":[0.0005353625,0.00016449172,0.000082757964,0.00015813296,0.000068116584,0.0000017357697,0.000114173476,0.00013511523,0.0000027415479],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005986621,0.000042072144,0.0006554519,0.000012063558,0.000009144133,0.000007697563,0.000017777333,0.00024835113,0.96203744,0.002800212,0.000013744854,0.03409619],"study_design_scores_gemma":[0.00063235813,0.00014573651,0.001093703,0.0000067457063,0.0000062016456,0.000022206872,0.0000078235,0.0028799225,0.9786244,0.00798398,0.008370393,0.00022650069],"about_ca_topic_score_codex":0.000058099107,"about_ca_topic_score_gemma":0.00006870234,"teacher_disagreement_score":0.12553611,"about_ca_system_score_codex":0.000020048423,"about_ca_system_score_gemma":0.00004661001,"threshold_uncertainty_score":0.67077774},"labels":[],"label_agreement":null},{"id":"W139572643","doi":"10.1007/978-1-62703-339-8_34","title":"D-Dimer and Fibrinogen/Fibrin Degradation Products","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Clinical Laboratory Practices and Quality Control","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta Hospital; Alberta Hospital Edmonton","funders":"","keywords":"D-dimer; Dimer; Standardization; Fibrinogen; Fibrin; Predictive value; Medicine; Chemistry; Computational biology; Internal medicine; Immunology; Computer science; Biology; Organic chemistry","score_opus":0.06403908835787306,"score_gpt":0.4689179384457145,"score_spread":0.4048788500878414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W139572643","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80498165,0.0022841122,0.17771056,0.0129637215,0.00019039465,0.0008324337,0.0000026730063,0.00003806696,0.0009963755],"genre_scores_gemma":[0.06678261,0.00007853908,0.9294372,0.0032184795,0.000079323785,0.000051652514,0.000018565152,0.00001570785,0.00031791342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979815,0.0011347526,0.00031637706,0.0003304855,0.00004956179,0.00018734689],"domain_scores_gemma":[0.9989854,0.00046493052,0.00008807475,0.00027779402,0.00010468891,0.000079113204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013333203,0.00010253501,0.00030279806,0.000073187184,0.000019012185,0.000013242451,0.000045720742,0.00015055081,0.000116882125],"category_scores_gemma":[0.0033670177,0.00008311985,0.000034101584,0.0001886021,0.000092142785,0.000053444568,0.000052109033,0.00020477195,0.000026595122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003876805,0.000043963755,0.012763679,0.000027900875,0.000029710067,0.0000073106307,0.00002024961,4.6950993e-7,0.90122575,0.003452571,0.000044744942,0.08234491],"study_design_scores_gemma":[0.0045338976,0.0013225119,0.10323774,0.00007837996,0.00022965428,0.00012332948,0.00013908512,0.0015544551,0.7415327,0.017077304,0.12958662,0.0005843314],"about_ca_topic_score_codex":0.00014246532,"about_ca_topic_score_gemma":0.0000040536293,"teacher_disagreement_score":0.7517266,"about_ca_system_score_codex":0.000013681487,"about_ca_system_score_gemma":0.00004348239,"threshold_uncertainty_score":0.4030878},"labels":[],"label_agreement":null},{"id":"W140099295","doi":"10.1007/978-1-62703-146-2_19","title":"Quantitative Characterization of Glycoproteins in Neurodegenerative Disorders Using iTRAQ","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institute on Aging; National Institutes of Health; National Institute of Environmental Health Sciences; Canadian Institute for Theoretical Astrophysics","keywords":"Neurodegeneration; Glycoprotein; Biomarker discovery; Glycoproteomics; Glycosylation; Biomarker; Computational biology; Mass spectrometry; Tandem mass spectrometry; Chemistry; Glycopeptide; Biochemistry; Proteomics; Chromatography; Biology; Glycan; Disease; Medicine; Pathology","score_opus":0.041794091638924544,"score_gpt":0.43123926528880485,"score_spread":0.3894451736498803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W140099295","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54945624,0.00026692307,0.4496988,0.00003796373,0.0000755552,0.00027232844,0.000009213281,0.000002597635,0.00018037236],"genre_scores_gemma":[0.69585586,0.000083163926,0.30375445,0.00008043339,0.000028158334,0.000048269863,0.00010190061,0.000020878875,0.00002687715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729437,0.0015526855,0.0003649904,0.00031758283,0.0000842625,0.00038610442],"domain_scores_gemma":[0.999452,0.000034904348,0.00012610227,0.0002611629,0.000065713,0.000060138198],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010592822,0.0001612245,0.0002484167,0.00026909568,0.000026839296,0.0000054133698,0.00016538319,0.00022374635,0.000021491176],"category_scores_gemma":[0.00051775784,0.00016126623,0.00007111887,0.00041527447,0.00015214927,0.000009349764,0.00011964114,0.00016751922,0.0000017481123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001248942,0.00012536075,0.01871551,0.000014865222,0.000014736446,0.0000010855584,0.00013259413,0.00017276345,0.97305334,0.002468207,4.3656297e-7,0.005176192],"study_design_scores_gemma":[0.0005332055,0.0002959822,0.009546889,0.000011925709,0.0000040254763,0.000003374761,0.00005713981,0.0015196136,0.9866086,0.00042705156,0.0008215251,0.00017066089],"about_ca_topic_score_codex":0.00012347002,"about_ca_topic_score_gemma":0.0000761483,"teacher_disagreement_score":0.14639963,"about_ca_system_score_codex":0.000025498799,"about_ca_system_score_gemma":0.000062903906,"threshold_uncertainty_score":0.6576246},"labels":[],"label_agreement":null},{"id":"W140160784","doi":"10.1007/978-1-4939-2020-4_5","title":"Macrocyclic Templates for Library Synthesis of Peptido-Conjugates","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Cyclic peptide; Aziridine; Conjugate; Combinatorial chemistry; Chemistry; Template; Peptide; Nucleophile; Ring (chemistry); Stereochemistry; Biochemistry; Nanotechnology; Organic chemistry; Materials science","score_opus":0.02597534155570863,"score_gpt":0.4081609772857614,"score_spread":0.38218563573005276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W140160784","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000051801795,0.8939593,0.104851745,0.000024792433,0.00007695132,0.00045630097,0.00015493624,0.000013590233,0.00041059157],"genre_scores_gemma":[0.000022016864,0.71278113,0.28600007,0.000064631124,0.00012896527,0.00038059228,0.0004236737,0.00008876256,0.00011017864],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961484,0.0013394563,0.0010940394,0.0009070754,0.00006222829,0.0004488151],"domain_scores_gemma":[0.9975009,0.0010452871,0.00056607794,0.0007596951,0.00003851887,0.00008949936],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093826256,0.0005378985,0.0025433945,0.00025513952,0.00003385003,0.000016969554,0.00072432903,0.0011104937,0.000048525264],"category_scores_gemma":[0.001302844,0.0004348925,0.0014729203,0.0002776482,0.00022223889,0.0000023694136,0.0003272409,0.00020209273,0.000004190039],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019045912,0.000055707347,0.000029684074,0.0036444217,0.0004316796,0.0000015758275,0.0000017721126,0.0000011103164,0.21167922,0.00029480524,0.00011163771,0.7837293],"study_design_scores_gemma":[0.000103558625,0.00008063818,3.931648e-7,0.0008561975,0.00047565222,0.0000074346494,0.000002336597,0.00000815038,0.28881973,0.0011282235,0.70815086,0.00036680224],"about_ca_topic_score_codex":0.000007950824,"about_ca_topic_score_gemma":0.0000021510668,"teacher_disagreement_score":0.7833625,"about_ca_system_score_codex":0.0000142923345,"about_ca_system_score_gemma":0.000093716626,"threshold_uncertainty_score":0.9998103},"labels":[],"label_agreement":null},{"id":"W140430483","doi":"10.1007/978-1-60327-009-0_13","title":"Functional Development of Human Fetal Gastrointestinal Tract","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Biology; Gastrointestinal tract; Computational biology; Cell biology; Bioinformatics; Biochemistry","score_opus":0.029788829039107324,"score_gpt":0.3899649960205265,"score_spread":0.36017616698141913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W140430483","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3183996,0.00038517592,0.6781506,0.000059215356,0.000088243294,0.00013606515,0.00000226034,0.000008043919,0.0027708039],"genre_scores_gemma":[0.44212288,0.000004570947,0.55746263,0.00013065193,0.000041738134,0.000008309487,0.0000870322,0.000009678667,0.00013250177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836653,0.00048065523,0.0004560531,0.00034248803,0.00006778462,0.00028647878],"domain_scores_gemma":[0.99950427,0.000019611603,0.0001392244,0.00020087422,0.0000696212,0.00006640532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092291425,0.00015785167,0.00024651765,0.00011498349,0.00005295876,0.0000033317428,0.00014087999,0.00018166869,0.000022007174],"category_scores_gemma":[0.00012798293,0.00014176808,0.00008733276,0.000119711905,0.00009311362,0.0000014482802,0.00004231196,0.00015414046,0.0000035916771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036724672,0.0001479026,0.006525734,0.000011246609,0.000012156504,0.000008496982,0.000025418734,0.000031603944,0.97854006,0.0014892431,0.000021509553,0.013149883],"study_design_scores_gemma":[0.00087678793,0.0012798595,0.07863545,0.00006059872,0.000010151927,0.00018275427,0.000047622703,0.000017047827,0.9149106,0.0016914081,0.0020435497,0.00024417593],"about_ca_topic_score_codex":0.000005852158,"about_ca_topic_score_gemma":0.0000039722963,"teacher_disagreement_score":0.12372329,"about_ca_system_score_codex":0.000022999238,"about_ca_system_score_gemma":0.00014914591,"threshold_uncertainty_score":0.57811344},"labels":[],"label_agreement":null},{"id":"W14069084","doi":"10.1007/978-1-60327-164-6_24","title":"Preparation and Characterization of Anti-phage Serum","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Characterization (materials science); Computational biology; Materials science; Biology; Nanotechnology","score_opus":0.010801862430123804,"score_gpt":0.3644605986046721,"score_spread":0.3536587361745483,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W14069084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7246713,0.000010270896,0.27454653,0.00011237519,0.0000463973,0.00007189365,0.0000032830812,0.000005129303,0.0005327975],"genre_scores_gemma":[0.81506366,0.000023376815,0.18461326,0.00021997422,0.000004960144,0.0000022925005,0.000011696876,0.0000026838188,0.000058108264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994056,0.00020834408,0.00013992058,0.00014478699,0.000015627911,0.00008570001],"domain_scores_gemma":[0.9998176,0.000013021082,0.000058553942,0.000091891234,0.000003287943,0.000015620273],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020524276,0.000053317322,0.00010121336,0.000031475214,0.000015990487,0.000004657053,0.00004792594,0.00006137424,0.00018687684],"category_scores_gemma":[0.000022619408,0.000050611467,0.000018023327,0.000096387295,0.000052859035,0.00005507533,0.000034515906,0.00004854491,0.0000043807822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005203026,0.000023098959,0.001578665,0.0000011774642,0.0000015684619,0.0000010814737,0.00007658145,0.0000064649375,0.96344244,0.00015853377,0.0000012461466,0.034703925],"study_design_scores_gemma":[0.000080921825,0.00008387134,0.29383504,0.0000032337182,0.0000033137928,0.0000068980657,0.000003197609,0.00017381273,0.70417035,0.00056524744,0.0010279245,0.000046220757],"about_ca_topic_score_codex":0.000024262272,"about_ca_topic_score_gemma":0.00000523565,"teacher_disagreement_score":0.29225639,"about_ca_system_score_codex":0.000014713862,"about_ca_system_score_gemma":0.0000018876864,"threshold_uncertainty_score":0.20638756},"labels":[],"label_agreement":null},{"id":"W141493186","doi":"10.1007/978-1-59745-512-1_9","title":"Salmonella Phages and Prophages—Genomics and Practical Aspects","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Prophage; Salmonella; Phylogenetic tree; Biology; Bacteriophage; Genome; Phage typing; Genetics; Typing; Genomics; Computational biology; Phage therapy; Virology; Gene; Bacteria; Escherichia coli","score_opus":0.06349988010661765,"score_gpt":0.47418354129433377,"score_spread":0.4106836611877161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W141493186","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001456412,0.926257,0.070278585,0.000051572566,0.00031308862,0.0005641986,0.0000118249445,0.000017769771,0.0023602892],"genre_scores_gemma":[0.0000024029066,0.6204085,0.37927267,0.00009933751,0.000034555946,0.00002101005,0.000010593883,0.000026071808,0.00012486719],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974824,0.0010296903,0.00043214156,0.0006586897,0.000040308714,0.00035678016],"domain_scores_gemma":[0.9990176,0.0004176328,0.00019027894,0.0002648556,0.0000045359816,0.000105090665],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010311994,0.0003313593,0.00086648995,0.000121739664,0.000056983845,0.00003687998,0.00011971125,0.00049192534,0.00023499437],"category_scores_gemma":[0.00022548903,0.00027490992,0.000110812354,0.00020071333,0.0004206345,0.000045696794,0.0005098093,0.000602133,0.000042381165],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004114784,0.000040219875,0.0000054540465,0.00032920807,0.000034433306,0.00019837261,0.000030411205,2.1899828e-7,0.05340594,0.00023600167,0.000035000056,0.9456806],"study_design_scores_gemma":[0.00009848592,0.00008081937,0.00005320862,0.00020418073,0.00014271101,0.0010070017,0.000008917094,0.0000037804525,0.0009994755,0.0004181124,0.99669844,0.00028484795],"about_ca_topic_score_codex":0.00008834585,"about_ca_topic_score_gemma":0.000026086931,"teacher_disagreement_score":0.99666345,"about_ca_system_score_codex":0.00014263522,"about_ca_system_score_gemma":0.000029950252,"threshold_uncertainty_score":0.9999703},"labels":[],"label_agreement":null},{"id":"W1415161376","doi":"10.1007/978-1-61779-612-8_8","title":"The Epigenetics of Brain Tumors","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Epigenetics; Epigenome; Medulloblastoma; DNA methylation; Ependymoma; microRNA; Biology; Brain tumor; Epigenetic therapy; Histone; Cancer research; Neuroscience; Genetics; Pathology; Medicine; Gene; Gene expression","score_opus":0.0538206847808327,"score_gpt":0.45349339783748616,"score_spread":0.3996727130566535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1415161376","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002945066,0.79614496,0.20256373,0.000022501052,0.00034214096,0.00043352845,0.00002082466,0.000004211151,0.00043868058],"genre_scores_gemma":[0.000011878075,0.85539144,0.14390334,0.0000318859,0.00014610426,0.0000983654,0.00018108443,0.00006727594,0.00016862358],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9942356,0.0035710565,0.0010309842,0.0005249173,0.00010084463,0.00053661497],"domain_scores_gemma":[0.997719,0.00051728,0.0005950332,0.0010004536,0.00008124285,0.00008697965],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0033037618,0.0004259874,0.0010780602,0.00015780113,0.000064940905,0.000012770688,0.00069067377,0.00087116624,0.000007774514],"category_scores_gemma":[0.0010285026,0.00030393837,0.000509227,0.00031448647,0.0003331892,9.2262763e-7,0.0003763265,0.0003436439,0.0000046366235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000058161913,0.000032508284,0.000049126516,0.00056195934,0.000103321654,0.0000015919512,0.000009255118,0.000005179298,0.050880313,0.0010977293,0.000011619783,0.9472416],"study_design_scores_gemma":[0.00011167739,0.0001671436,0.0000083628265,0.00023097738,0.00014098293,0.000006209335,0.0000057794728,0.000002761343,0.03428955,0.0014777564,0.96324885,0.00030993324],"about_ca_topic_score_codex":0.000013339922,"about_ca_topic_score_gemma":0.000016376594,"teacher_disagreement_score":0.9632372,"about_ca_system_score_codex":0.000027636632,"about_ca_system_score_gemma":0.00021289308,"threshold_uncertainty_score":0.9999413},"labels":[],"label_agreement":null},{"id":"W142326508","doi":"10.1007/978-1-59745-536-7_11","title":"StemBase","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Stem cell; Gene; Biology; DNA microarray; Gene expression; Function (biology); Computational biology; Molecular biology; Genetics","score_opus":0.025233366523054267,"score_gpt":0.4285963153459131,"score_spread":0.40336294882285884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W142326508","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.072039306,0.0009909812,0.92124087,0.00011094165,0.00027102281,0.00012029147,0.0000015200401,0.000011420927,0.005213632],"genre_scores_gemma":[0.27535704,0.000070336784,0.7225091,0.0011966672,0.0001236353,0.000033866236,0.00005546661,0.00002583127,0.00062810135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986356,0.00039638364,0.000253124,0.00038458465,0.00004881139,0.00028149286],"domain_scores_gemma":[0.9993951,0.000026057423,0.00006771417,0.00040084517,0.000040244842,0.00007005551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015094467,0.00012049264,0.00012959517,0.00013667895,0.000026021433,0.000005749646,0.00019258588,0.00023336355,0.000026491321],"category_scores_gemma":[0.00021375027,0.00011389703,0.00006709398,0.0002017989,0.00007526265,9.838134e-7,0.00008740893,0.000106065105,0.000006160715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048635015,0.00002979511,0.0027568624,0.0000036087722,0.000008150513,0.000005441785,0.000012650333,0.000010049825,0.9519548,0.0021354803,0.00014786795,0.042886663],"study_design_scores_gemma":[0.00034391205,0.00009793543,0.0017956428,0.0000040293944,0.0000032571024,0.000008080559,0.00004989857,0.000015895415,0.890842,0.0012952796,0.10541004,0.00013400595],"about_ca_topic_score_codex":0.000008360589,"about_ca_topic_score_gemma":0.00001401311,"teacher_disagreement_score":0.20331772,"about_ca_system_score_codex":0.000017389773,"about_ca_system_score_gemma":0.000038726583,"threshold_uncertainty_score":0.4644586},"labels":[],"label_agreement":null},{"id":"W142583359","doi":"10.1007/978-1-60327-565-1_6","title":"In Sffamily Identification of Genes in Bacteriophage DNA","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Institute for Nanotechnology; Canadian Science Centre for Human and Animal Health; University of Alberta; University of Guelph; Queen's University; Public Health Agency of Canada","funders":"","keywords":"ENCODE; Genome; Gene; Identification (biology); Computational biology; Biology; Bacteriophage; Genome project; Genetics; Annotation; DNA; DNA sequencing","score_opus":0.013053950380186924,"score_gpt":0.36531652904524714,"score_spread":0.3522625786650602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W142583359","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92684734,0.00010842279,0.07193911,0.00018114933,0.00014771019,0.00012920485,0.0000031951954,0.0000044146354,0.0006394334],"genre_scores_gemma":[0.8305498,0.00005853665,0.16891885,0.00034966652,0.0000065639756,0.000011190055,0.000006595671,0.000005521487,0.00009331737],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871683,0.0004628485,0.00038366835,0.00023880466,0.000026345035,0.00017147712],"domain_scores_gemma":[0.99966675,0.0000383915,0.00008661212,0.00018697859,0.0000034590887,0.000017784945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006229348,0.00008296678,0.00017392321,0.00012924906,0.000008973098,0.0000052773444,0.00016120891,0.00010221845,0.00025659273],"category_scores_gemma":[0.00006695617,0.00008426118,0.00003841889,0.00032065724,0.00007503277,0.00007209678,0.000056078043,0.00011496632,0.000019649544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010169161,0.00007700435,0.0034988604,0.0000018224414,0.0000010976491,0.000012025016,0.000103494116,0.000068128356,0.9639042,0.00011699578,0.000003841385,0.032202348],"study_design_scores_gemma":[0.00015977873,0.000038590053,0.35185772,0.0000061150467,0.0000015680502,0.000004778885,0.000017191622,0.00008573814,0.6451642,0.0017069286,0.0008898687,0.000067551744],"about_ca_topic_score_codex":0.00045027395,"about_ca_topic_score_gemma":0.00022508322,"teacher_disagreement_score":0.34835884,"about_ca_system_score_codex":0.00008207566,"about_ca_system_score_gemma":0.000004827956,"threshold_uncertainty_score":0.3436071},"labels":[],"label_agreement":null},{"id":"W143496817","doi":"10.1007/978-1-4939-2428-8_14","title":"Randomized Controlled Trials 6: On Contamination and Estimating the Actual Treatment Effect","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Randomized controlled trial; Contamination; Environmental science; Econometrics; Statistics; Medicine; Mathematics; Biology; Internal medicine; Ecology","score_opus":0.22326473890545312,"score_gpt":0.5631080594861806,"score_spread":0.33984332058072747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W143496817","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041175842,0.0003072183,0.95443946,0.0002096518,0.00013478518,0.002869789,0.0000014426504,0.000073122625,0.0007886995],"genre_scores_gemma":[0.05660683,0.000018032666,0.9418474,0.00011460672,0.000034411973,0.0013214139,0.000004015916,0.000016082626,0.000037206344],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9751581,0.02360132,0.0007481156,0.00023075944,0.000081136655,0.00018058017],"domain_scores_gemma":[0.94772506,0.05150847,0.00042807157,0.00024426007,0.000054826236,0.00003929747],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.032751173,0.0002265566,0.00251352,0.0001227357,0.00003297717,0.000018223307,0.000098915545,0.00015606591,0.000005997947],"category_scores_gemma":[0.12040517,0.000100801175,0.00022221076,0.00007672188,0.00018722209,0.000020042731,0.000038974405,0.0001364844,9.71162e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.08648168,0.0001720396,0.00007251731,0.000029108416,0.0007258631,0.000027221133,0.0016259026,0.00010787362,0.10704007,0.49312168,0.000021324455,0.3105747],"study_design_scores_gemma":[0.18954168,0.0009893122,0.0000014606774,0.000035159366,0.00024374119,0.000007384395,0.00004487875,0.00698791,0.103895865,0.6980953,0.000037233203,0.0001200645],"about_ca_topic_score_codex":0.00001674211,"about_ca_topic_score_gemma":0.0000039251217,"teacher_disagreement_score":0.31045467,"about_ca_system_score_codex":0.00010018306,"about_ca_system_score_gemma":0.000028858787,"threshold_uncertainty_score":0.9959862},"labels":[],"label_agreement":null},{"id":"W144490132","doi":"10.1007/978-1-4939-2309-0_8","title":"A β-Lactamase Based Assay to Measure Surface Expression of Membrane Proteins","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick; Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Surface protein; Membrane; Membrane protein; Extracellular; Epitope; Cell; Cell membrane; Cell biology; Chemistry; Antibody; Protein expression; Computational biology; Biology; Biochemistry; Gene; Immunology; Virology","score_opus":0.01685112362907346,"score_gpt":0.3443390596267962,"score_spread":0.3274879359977227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W144490132","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35845026,0.00006290111,0.64033926,0.00012895287,0.00016144862,0.00039827736,0.000011975847,0.000011562815,0.00043535035],"genre_scores_gemma":[0.47927114,0.000002517673,0.52009416,0.00041653757,0.00005555514,0.000038997332,0.000044686516,0.000025634106,0.000050770956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99638,0.0021322067,0.0003901591,0.0005981375,0.0001298069,0.00036971617],"domain_scores_gemma":[0.99881667,0.000080420505,0.00012997277,0.00072344445,0.00011765673,0.00013185163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020144104,0.00025923073,0.00041778348,0.00011960643,0.000032457938,0.000007246031,0.00036755743,0.00041363214,0.00003709057],"category_scores_gemma":[0.0011701012,0.0002207119,0.00015083658,0.0002429674,0.000103624574,0.000002254115,0.000151097,0.00017904563,0.0000027858496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017717737,0.00007548363,0.0013514351,0.00003946866,0.000010981885,0.0000029654636,0.00002189582,0.00041798168,0.9922244,0.00011805059,0.000021063812,0.0055391183],"study_design_scores_gemma":[0.0008268449,0.0004737405,0.00023270622,0.000036351103,0.000020887463,0.000005046159,0.000009965654,0.0000855666,0.99097764,0.00009693641,0.006976441,0.0002578851],"about_ca_topic_score_codex":0.000028837025,"about_ca_topic_score_gemma":0.000016005855,"teacher_disagreement_score":0.12082089,"about_ca_system_score_codex":0.000013563698,"about_ca_system_score_gemma":0.00008431847,"threshold_uncertainty_score":0.900037},"labels":[],"label_agreement":null},{"id":"W144813951","doi":"10.1007/978-1-60327-009-0_12","title":"Immune System: Maturation of Myeloid Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Cell culture; Myeloid; Cell biology; Immune system; Biology; Myeloid cells; Cell; Phenotype; Myeloid leukemia; Cellular differentiation; Immunology; Genetics; Gene","score_opus":0.011154977337488664,"score_gpt":0.33746449344853874,"score_spread":0.3263095161110501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W144813951","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28931862,0.0023498472,0.7058335,0.00007707884,0.0002931118,0.00016977507,0.000006989466,0.000011018189,0.0019400653],"genre_scores_gemma":[0.69271904,0.000096446594,0.30674437,0.00021981551,0.000049896782,0.000009729587,0.00005635352,0.000009720964,0.000094661846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854815,0.00050189864,0.00038010662,0.00031038176,0.000046438938,0.00021303802],"domain_scores_gemma":[0.9993676,0.000016220476,0.0001295282,0.00038321002,0.00007305166,0.000030414323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005671458,0.0001439407,0.00025897525,0.00010267537,0.000018300532,0.00000589954,0.00023911077,0.00026123913,0.000008327927],"category_scores_gemma":[0.0000739708,0.00013423088,0.000114339986,0.00012802824,0.000062686115,0.0000021404092,0.000056581193,0.00009655916,0.0000051550223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008834637,0.0000328061,0.000081139646,0.000014930339,0.000019213196,0.0000048372654,0.000018163972,0.00006920649,0.9863207,0.0015525931,0.000026424561,0.011771685],"study_design_scores_gemma":[0.000258721,0.00050360925,0.0006040336,0.000021180558,0.000010254529,0.000013064106,0.000056688088,0.00010995213,0.99684924,0.0005971218,0.0008392448,0.00013691277],"about_ca_topic_score_codex":0.000022618922,"about_ca_topic_score_gemma":0.00000292762,"teacher_disagreement_score":0.4034004,"about_ca_system_score_codex":0.000014432484,"about_ca_system_score_gemma":0.00003244146,"threshold_uncertainty_score":0.54737765},"labels":[],"label_agreement":null},{"id":"W145266312","doi":"10.1007/978-1-60327-015-1_16","title":"Chromatin Immunoprecipitation in Mammalian Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin immunoprecipitation; Chromatin; ChIA-PET; ChIP-on-chip; ChIP-sequencing; Biology; Cell biology; Bivalent chromatin; RNA polymerase II; Immunoprecipitation; Promoter; Gene; Transcription (linguistics); Chromatin remodeling; Molecular biology; Gene expression; Genetics","score_opus":0.008428161504345054,"score_gpt":0.3308785998988967,"score_spread":0.3224504383945516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W145266312","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6603896,0.0007055861,0.3370344,0.00016672826,0.00017115424,0.00020467922,0.0000057476414,0.000008293273,0.0013137688],"genre_scores_gemma":[0.3704031,0.00008918277,0.6287598,0.00049264776,0.00003305135,0.00001980942,0.00010114003,0.000017236947,0.00008403229],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981775,0.00060523505,0.00039860042,0.00042311588,0.000046379966,0.0003491359],"domain_scores_gemma":[0.9994027,0.000023760185,0.000099904464,0.0004013272,0.00002943628,0.00004288963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008392427,0.00018839125,0.00023880285,0.00015176002,0.000023434543,0.00001391082,0.00028107816,0.00031073598,0.000015093872],"category_scores_gemma":[0.00012655572,0.00020084743,0.00008185104,0.00019800753,0.000056251418,0.0000021799449,0.00007515441,0.0001564693,0.000006404489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024664349,0.00006489348,0.00056864164,0.000005362828,0.000007094532,0.000009638066,0.000058023372,0.0005036137,0.9720291,0.0011395339,0.000017551989,0.025571909],"study_design_scores_gemma":[0.000865765,0.00048055878,0.008829571,0.0000136655335,0.000006024256,0.000013141646,0.000062782405,0.0012777031,0.97251076,0.012991867,0.002614713,0.0003334701],"about_ca_topic_score_codex":0.0000357933,"about_ca_topic_score_gemma":0.0000459421,"teacher_disagreement_score":0.29172537,"about_ca_system_score_codex":0.000039672614,"about_ca_system_score_gemma":0.000043605607,"threshold_uncertainty_score":0.8190321},"labels":[],"label_agreement":null},{"id":"W145368513","doi":"10.1007/978-1-59745-395-0_3","title":"Differentiation of Dendritic Cell Subsets from Mouse Bone Marrow","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"","keywords":"Immune system; Bone marrow; Progenitor cell; Immunology; Dendritic cell; Biology; Cell biology; Phenotype; Population; Antigen; Stem cell; Medicine; Genetics","score_opus":0.03852982437483178,"score_gpt":0.38745750066572926,"score_spread":0.3489276762908975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W145368513","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007245021,0.8679878,0.12951069,0.0000043748537,0.0009360565,0.00052387896,0.00014288917,0.00003164102,0.00013816626],"genre_scores_gemma":[0.00004522452,0.9397213,0.057736896,0.000052262185,0.000018312394,0.00007395441,0.0014066848,0.000079772464,0.00086560094],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9891486,0.0081265615,0.0014367237,0.0006467859,0.00003563341,0.00060565566],"domain_scores_gemma":[0.99650544,0.0018582622,0.0007263285,0.0008299239,0.00006049954,0.000019534978],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015687543,0.00059013313,0.0026861266,0.0007945131,0.00005560632,0.0000080294685,0.00059313356,0.0020146102,0.00055918697],"category_scores_gemma":[0.0003706934,0.0005109643,0.0007115783,0.00038220908,0.0003833044,0.000025768457,0.00018393126,0.0009651732,0.000109175664],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000892958,0.00014359875,0.000012003365,0.0007044441,0.00028100723,0.000013744972,0.00004722615,1.0949391e-7,0.5120337,0.00016775927,0.000015919139,0.48649123],"study_design_scores_gemma":[0.00092455314,0.00016857324,0.000014710259,0.0009957477,0.00039180354,0.00004232223,0.000019008017,3.5574698e-7,0.35423595,0.00040211782,0.64232826,0.00047659708],"about_ca_topic_score_codex":0.0001893131,"about_ca_topic_score_gemma":0.000009898221,"teacher_disagreement_score":0.64231235,"about_ca_system_score_codex":0.00009369285,"about_ca_system_score_gemma":0.00015128877,"threshold_uncertainty_score":0.9997342},"labels":[],"label_agreement":null},{"id":"W1453792539","doi":"10.1007/978-1-4939-0354-2_13","title":"Screening Proteins for NMR Suitability","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto; Ontario Institute for Cancer Research","funders":"National Institute of General Medical Sciences","keywords":"Structural genomics; Nuclear magnetic resonance spectroscopy; Identification (biology); Structural biology; Computational biology; Genomics; Chemistry; Biology; Protein structure; Biochemistry; Genome; Gene; Stereochemistry","score_opus":0.016367255690525575,"score_gpt":0.37004707016577765,"score_spread":0.3536798144752521,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1453792539","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04176998,0.0003464151,0.95637846,0.00013369543,0.0001221009,0.00064862514,0.000015270458,0.000017600052,0.0005678449],"genre_scores_gemma":[0.10274371,0.0000072617313,0.8961397,0.0005458324,0.0001258208,0.00023256594,0.00011351285,0.000027643353,0.00006398497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99787307,0.00079843943,0.00029498257,0.0005770482,0.000048021197,0.00040846135],"domain_scores_gemma":[0.9991381,0.0000883335,0.000088485074,0.000553958,0.00006541515,0.00006572096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017867644,0.00019965142,0.00027561744,0.00007165249,0.00005731419,0.000011470495,0.0003008297,0.00037505894,0.0000065034196],"category_scores_gemma":[0.0015484123,0.00018723625,0.00014964,0.0001132987,0.00014159725,0.0000018983621,0.00016974915,0.00014115247,7.4084954e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080816004,0.000020970758,0.0037498553,0.000021259908,0.000022526905,5.817682e-7,0.000009814041,0.00012798146,0.9314836,0.00724961,0.000012076431,0.057220876],"study_design_scores_gemma":[0.0011060475,0.0007433475,0.0014154905,0.000010651969,0.000017978284,0.000012559484,0.000012053825,0.002496572,0.8848196,0.06128887,0.0476589,0.0004179021],"about_ca_topic_score_codex":0.000030522122,"about_ca_topic_score_gemma":0.00004557268,"teacher_disagreement_score":0.060973726,"about_ca_system_score_codex":0.000012947321,"about_ca_system_score_gemma":0.000036641686,"threshold_uncertainty_score":0.7635272},"labels":[],"label_agreement":null},{"id":"W145393151","doi":"10.1007/978-1-60761-454-8_17","title":"Characterization of Polysaccharides Using Mass Spectrometry for Bacterial Serotyping","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Steacie Institute for Molecular Sciences; National Research Council Canada; Institute for Biological Sciences","funders":"Genomic Health","keywords":"Polysaccharide; Serotype; Mass spectrometry; Microbiology; Bacterial cell structure; Typing; Fragmentation (computing); Chemistry; Characterization (materials science); Computational biology; Biology; Bacteria; Chromatography; Biochemistry; Nanotechnology; Genetics; Materials science","score_opus":0.03339512314364863,"score_gpt":0.40097097048320457,"score_spread":0.36757584733955595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W145393151","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45870796,0.00018684857,0.54058665,0.000037464688,0.00021333741,0.00020132115,0.000026934864,0.000010617078,0.00002885545],"genre_scores_gemma":[0.47835708,0.000049234706,0.521036,0.0001439602,0.00005987664,0.00002308224,0.00026390713,0.000018344997,0.000048506838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983912,0.0007131688,0.00031807902,0.0002522749,0.000011177431,0.00031408222],"domain_scores_gemma":[0.9995106,0.0001094726,0.00011192343,0.0001824168,0.00006906545,0.000016530948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007415449,0.00011805288,0.00030660137,0.00036281228,0.00005866814,0.000007667718,0.00012610058,0.0002554018,0.00021205665],"category_scores_gemma":[0.00025103948,0.00011519873,0.00011366881,0.00028524475,0.00009455496,0.00003540033,0.00003086883,0.00013324726,0.0000031415518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015914312,0.0000722349,0.00034091598,0.000015990672,0.000041951567,0.0000010030668,0.000022402432,0.000004404255,0.9896212,0.0034702846,0.0000014688732,0.006248978],"study_design_scores_gemma":[0.0006221833,0.0002079478,0.0006820612,0.000017500508,0.000019103505,0.000011439232,0.000011153194,0.000049940238,0.99404305,0.0039193192,0.00030664023,0.00010963267],"about_ca_topic_score_codex":0.000035897494,"about_ca_topic_score_gemma":0.0000012026304,"teacher_disagreement_score":0.019649114,"about_ca_system_score_codex":0.00004135,"about_ca_system_score_gemma":0.0000613788,"threshold_uncertainty_score":0.4697668},"labels":[],"label_agreement":null},{"id":"W1454215067","doi":"10.1007/978-1-4939-1053-3_1","title":"Error-Prone PCR and Effective Generation of Gene Variant Libraries for Directed Evolution","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Directed evolution; Gene; Cloning (programming); Computational biology; Genetics; Mutagenesis; Biology; clone (Java method); Sequence (biology); Plasmid; Restriction enzyme; Sequence space; DNA sequencing; Mutation; Computer science","score_opus":0.014271299157466617,"score_gpt":0.3684219783189495,"score_spread":0.3541506791614829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1454215067","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13904487,0.001611014,0.85876197,0.000028557914,0.00014295359,0.00031964044,0.00001045124,0.000010394425,0.00007018129],"genre_scores_gemma":[0.36617455,0.00002339716,0.6334673,0.000036589983,0.00008132607,0.00008897794,0.00010020822,0.000014360058,0.000013314148],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988076,0.00046993623,0.00020349726,0.0003177953,0.000028262897,0.00017290664],"domain_scores_gemma":[0.9995758,0.000079607074,0.00006019051,0.00020282633,0.000048916045,0.00003264351],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006841184,0.00012676009,0.0002099179,0.0000770943,0.000027613778,0.0000058611204,0.00007723904,0.000224519,0.0000016120381],"category_scores_gemma":[0.0005930855,0.00012395506,0.000046207104,0.000081670936,0.00008538789,0.0000021315343,0.000055355977,0.000058567635,1.2215902e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045556048,0.000017141805,0.0004621662,0.000027306256,0.00003403097,3.457858e-7,0.00003179819,0.0006428965,0.9815953,0.0031524487,0.000012686489,0.013978362],"study_design_scores_gemma":[0.00057976675,0.00044505092,0.0021008502,0.0000057098655,0.000021598407,0.000008479317,0.000009416235,0.013704776,0.9793469,0.002388115,0.0012496498,0.00013970297],"about_ca_topic_score_codex":0.000016472144,"about_ca_topic_score_gemma":0.0000093038525,"teacher_disagreement_score":0.22712967,"about_ca_system_score_codex":0.000009324463,"about_ca_system_score_gemma":0.000020240475,"threshold_uncertainty_score":0.5054741},"labels":[],"label_agreement":null},{"id":"W145649327","doi":"10.1007/978-1-62703-589-7_2","title":"Immunoproteomics: Current Technology and Applications","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Proteomics; Immune system; Antigen; Computational biology; Biology; In silico; Genomics; Immunology; Genome; Genetics; Gene","score_opus":0.03551321452919942,"score_gpt":0.406532865340508,"score_spread":0.37101965081130855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W145649327","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008772455,0.6564475,0.34206656,0.000010916657,0.00009115649,0.0011787805,0.000014230294,0.000012861814,0.00016916978],"genre_scores_gemma":[3.8531846e-7,0.70139974,0.2962537,0.000019480394,0.00006244067,0.0018942225,0.00027582824,0.000044760225,0.000049449183],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99762076,0.00046576257,0.00081042264,0.00064066745,0.00004050552,0.00042186628],"domain_scores_gemma":[0.9985635,0.000037509897,0.00036310323,0.0009195843,0.00005818817,0.0000580616],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00061740953,0.0004953695,0.0011588399,0.0005842275,0.000059150658,0.00003215106,0.0005983884,0.001004035,0.000009430593],"category_scores_gemma":[0.00014817325,0.00041390368,0.00023491438,0.00049375463,0.0002038306,0.00000298391,0.0007473391,0.00055219064,0.000020065623],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000016792382,0.000032016946,0.00000798668,0.0014860267,0.000091296584,4.3009018e-7,0.000004652855,3.556167e-7,0.0065755853,0.003494721,0.000018668721,0.98828655],"study_design_scores_gemma":[0.00018288563,0.000101252575,6.0816905e-7,0.00035127564,0.00010175127,0.0000753877,0.000013882765,0.00001089422,0.0013590556,0.0030811646,0.99429655,0.0004252617],"about_ca_topic_score_codex":0.00000502687,"about_ca_topic_score_gemma":5.8107105e-7,"teacher_disagreement_score":0.9942779,"about_ca_system_score_codex":0.000030474326,"about_ca_system_score_gemma":0.00013399617,"threshold_uncertainty_score":0.99983126},"labels":[],"label_agreement":null},{"id":"W14570962","doi":"10.1007/978-1-62703-029-8_5","title":"Expanded Newborn Screening of Inborn Errors of Metabolism by Capillary Electrophoresis-Electrospray Ionization-Mass Spectrometry (CE-ESI-MS)","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Electrospray ionization; Chromatography; Chemistry; Capillary electrophoresis; Mass spectrometry; Tandem mass spectrometry; Electrospray; Newborn screening; Capillary electrophoresis–mass spectrometry; Biochemistry","score_opus":0.008878231316086666,"score_gpt":0.31949590577879355,"score_spread":0.3106176744627069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W14570962","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2615572,0.034972627,0.7023028,0.000046858546,0.00019174592,0.00024120625,0.000026607937,0.000009313097,0.00065165025],"genre_scores_gemma":[0.27118418,0.0022616733,0.7257984,0.0002094824,0.00010297993,0.000034506877,0.0002615282,0.000060385988,0.000086876615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99626845,0.0014412771,0.00076025684,0.00055922143,0.00019010014,0.0007807205],"domain_scores_gemma":[0.99854887,0.00008500081,0.00039209067,0.000679409,0.00014699403,0.00014763034],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014776078,0.00036838898,0.0007419975,0.00033851035,0.00004722867,0.0000072996886,0.0004888777,0.000482562,0.0000963093],"category_scores_gemma":[0.0007367792,0.0003623469,0.00023263386,0.00081204285,0.00027924948,0.000008853727,0.00015919171,0.00023385667,0.0000014527152],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011982956,0.00014143727,0.012121165,0.000028692282,0.00017497507,8.8872287e-7,0.00006792601,0.000055782028,0.9762155,0.0009824953,0.00021731602,0.009873989],"study_design_scores_gemma":[0.00084899954,0.00022844588,0.005017832,0.000009897363,0.000086327535,0.000007958047,0.00008746244,0.000033881035,0.9762754,0.0012210954,0.015845902,0.00033682463],"about_ca_topic_score_codex":0.000105435305,"about_ca_topic_score_gemma":0.000008983396,"teacher_disagreement_score":0.032710955,"about_ca_system_score_codex":0.000008956383,"about_ca_system_score_gemma":0.000109908564,"threshold_uncertainty_score":0.9998829},"labels":[],"label_agreement":null},{"id":"W146440179","doi":"10.1007/978-1-60327-015-1_12","title":"Identification of Sequence-Specific DNA-Binding Proteins by Southwestern Blotting","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"","keywords":"Electroblotting; Blot; DNA; Sodium dodecyl sulfate; Molecular biology; Gel electrophoresis; Polyacrylamide gel electrophoresis; DNA-binding protein; Chemistry; Southern blot; Biochemistry; Biology; Gene; Transcription factor","score_opus":0.03382260894904973,"score_gpt":0.3969020005241535,"score_spread":0.3630793915751037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W146440179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5841906,0.0005042055,0.41486466,0.00008858282,0.00003825631,0.00019973399,0.000011754186,0.0000069923767,0.00009519485],"genre_scores_gemma":[0.7995015,0.0001386844,0.19968148,0.00012268299,0.00004942633,0.000036956524,0.00012999804,0.000021336531,0.00031797402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786687,0.0007027428,0.0004746055,0.00047001132,0.00010041711,0.00038537584],"domain_scores_gemma":[0.9992282,0.000030340461,0.00018215411,0.0004212414,0.0000725616,0.00006554327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015685725,0.00015725089,0.00023402485,0.00014010046,0.00004856382,0.000018035835,0.00032851365,0.00023452961,0.000006398273],"category_scores_gemma":[0.0003568968,0.0001548839,0.00009258225,0.00022666791,0.00012051975,0.000004105106,0.00007832106,0.00016465747,0.0000033805218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033440792,0.000045180546,0.0012651616,0.000009353997,0.0000143106345,0.0000047899407,0.000034239867,0.000012388488,0.97217965,0.0003761931,0.000020321599,0.026004987],"study_design_scores_gemma":[0.0003239503,0.00029086467,0.00031784072,0.000016114196,0.0000037610132,0.000008615028,0.00005364831,0.00012695177,0.9968143,0.00083273207,0.0010594502,0.00015174206],"about_ca_topic_score_codex":0.000014947509,"about_ca_topic_score_gemma":0.0000032421424,"teacher_disagreement_score":0.21531086,"about_ca_system_score_codex":0.000024833975,"about_ca_system_score_gemma":0.00004081279,"threshold_uncertainty_score":0.63159823},"labels":[],"label_agreement":null},{"id":"W146678022","doi":"10.1007/978-1-60327-015-1_28","title":"Functional Studies of DNA-Protein Interactions Using FRET Techniques","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Förster resonance energy transfer; DNA; Nucleic acid; Computational biology; Biophysics; Nanotechnology; Chemistry; Biology; Biological system; Fluorescence; Biochemistry; Physics; Materials science","score_opus":0.04487297517434267,"score_gpt":0.4266691245556394,"score_spread":0.3817961493812967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W146678022","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5727877,0.0010193379,0.42530394,0.000099746416,0.000089428904,0.0000943055,0.000005617921,0.000012319242,0.00058763917],"genre_scores_gemma":[0.40275946,0.00004854708,0.596681,0.00024813937,0.000083149695,0.000015172283,0.000032565575,0.000012121647,0.000119850876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988289,0.0002791393,0.00031504667,0.0003264891,0.000051037663,0.0001994221],"domain_scores_gemma":[0.9994157,0.00002475829,0.000117131734,0.00031104818,0.00009829868,0.000033088552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043559299,0.00015821564,0.00025787586,0.0000877331,0.0000332013,0.0000036166132,0.00015721624,0.00020182616,0.000019770712],"category_scores_gemma":[0.00031331732,0.00015124427,0.000112013644,0.00013488476,0.0001773233,0.0000028358245,0.00010184725,0.00013884362,6.2890086e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004586663,0.000057023226,0.00025728947,0.000011496784,0.00005499403,0.0000035849005,0.000018780334,0.00001142674,0.987574,0.0004378363,0.000078395584,0.011449351],"study_design_scores_gemma":[0.00017541603,0.00018302999,0.00015733085,0.000027694676,0.000014944637,0.000023599807,0.000059091988,0.000019998979,0.98851794,0.008242875,0.002431082,0.00014697351],"about_ca_topic_score_codex":0.0000074702198,"about_ca_topic_score_gemma":0.0000018742753,"teacher_disagreement_score":0.17137705,"about_ca_system_score_codex":0.000024011546,"about_ca_system_score_gemma":0.000036200945,"threshold_uncertainty_score":0.61675626},"labels":[],"label_agreement":null},{"id":"W1470233841","doi":"10.1007/978-1-60761-863-8_5","title":"Modulation of MicroRNAs for Potential Cancer Therapeutics","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"microRNA; Biology; Reprogramming; Embryonic stem cell; Stem cell; Gene silencing; Cell biology; Cancer cell; Gene regulatory network; Cancer; Gene expression; Computational biology; Cell; Cancer research; Gene; Genetics","score_opus":0.018603277312027457,"score_gpt":0.3938315500207919,"score_spread":0.37522827270876447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1470233841","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43758723,0.00048402735,0.56132257,0.0000739439,0.00026241026,0.00021370292,0.000024113602,0.00000370137,0.000028268814],"genre_scores_gemma":[0.4778567,0.00004584103,0.5216563,0.00012536281,0.00009343966,0.000064499895,0.00010936745,0.0000208687,0.000027623459],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895006,0.00023406994,0.00027290353,0.0003066203,0.000039328752,0.00019703875],"domain_scores_gemma":[0.99936086,0.00002453751,0.00013866753,0.00032266686,0.00012224166,0.000031046588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005003162,0.00012687655,0.00017135177,0.00008201638,0.00002290923,0.0000045213137,0.00016584356,0.00031969653,0.00001863348],"category_scores_gemma":[0.00009466977,0.00012689723,0.00012210027,0.00008802059,0.00012226986,0.0000017069347,0.000059662947,0.000095266856,3.2919954e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008631191,0.000042458127,0.0017650214,0.000018560318,0.000050485938,3.5483467e-7,0.00001133284,0.00038395074,0.97988063,0.00075853325,0.000014017536,0.016988328],"study_design_scores_gemma":[0.0005516724,0.00008453125,0.0039323713,0.000004384519,0.00002859642,0.000003698077,0.000004583176,0.0017130226,0.98364335,0.0037843187,0.0061128954,0.00013654724],"about_ca_topic_score_codex":0.00002357441,"about_ca_topic_score_gemma":0.000025279594,"teacher_disagreement_score":0.040269464,"about_ca_system_score_codex":0.0000094601455,"about_ca_system_score_gemma":0.00006881174,"threshold_uncertainty_score":0.51747185},"labels":[],"label_agreement":null},{"id":"W1481377573","doi":"10.1007/978-1-60327-547-7_18","title":"Protein Components of the microRNA Pathway and Human Diseases","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Drosha; Dicer; Argonaute; Biology; microRNA; RNA-binding protein; Translation (biology); Genetics; Biogenesis; Messenger RNA; RNA interference; Cell biology; RNA; Gene","score_opus":0.03628498192312824,"score_gpt":0.369842082109055,"score_spread":0.33355710018592677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1481377573","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006896474,0.9897109,0.0022470842,0.000010087341,0.00010866827,0.00082656654,0.000070387934,0.0000036999409,0.0001261249],"genre_scores_gemma":[0.00041173372,0.96570504,0.03331762,0.00006693821,0.000011270864,0.00012303371,0.00022466951,0.00005112528,0.000088567096],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99721056,0.0013866086,0.00051191845,0.0005656426,0.00006670133,0.00025855628],"domain_scores_gemma":[0.99909645,0.000023330122,0.000283273,0.00051721616,0.000025991687,0.000053736745],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00016827299,0.00035298683,0.00079089944,0.000095455696,0.00006512586,0.000005609497,0.0004651518,0.00038426512,0.0000030721278],"category_scores_gemma":[0.0001124293,0.00025513704,0.00031321408,0.00016093024,0.00037823446,5.988298e-7,0.0006149527,0.00020565299,6.757855e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000050633703,0.0000815603,0.00015241552,0.00087508047,0.000084313295,0.000005795531,0.000007348775,4.0475334e-7,0.8287394,0.00018691509,0.000018620045,0.16984306],"study_design_scores_gemma":[0.00033456055,0.00016339043,0.0006595321,0.00074546604,0.00006488357,0.000051216284,0.000003715002,3.4904284e-7,0.045809284,0.0003579639,0.9513967,0.00041294686],"about_ca_topic_score_codex":0.000018530991,"about_ca_topic_score_gemma":0.0000063375683,"teacher_disagreement_score":0.95137805,"about_ca_system_score_codex":0.000012034517,"about_ca_system_score_gemma":0.00013147145,"threshold_uncertainty_score":0.9999901},"labels":[],"label_agreement":null},{"id":"W148175565","doi":"10.1007/978-1-59745-261-8_3","title":"Genome-Wide Analysis of Membrane Transport Using Yeast Knockout Arrays","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Golgi apparatus; Endosome; Rab; Cell biology; Transport protein; Biology; Mutant; Saccharomyces cerevisiae; Vacuole; Secretory pathway; Secretion; Retromer; Vesicular transport protein; Yeast; Vacuolar protein sorting; Gene; Biochemistry; GTPase; Membrane; Vesicle; Cytoplasm","score_opus":0.02660541531619005,"score_gpt":0.326259708824585,"score_spread":0.29965429350839495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W148175565","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49181023,0.00050582853,0.5073124,0.0000072410676,0.000047165042,0.000085882944,0.000017115253,0.000005020167,0.00020911427],"genre_scores_gemma":[0.7305677,0.00025505098,0.26695856,0.00009248765,0.000030996238,0.000009309633,0.0020044511,0.000025679736,0.000055756045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813455,0.00040976057,0.00052354054,0.0005162248,0.00009550034,0.0003204108],"domain_scores_gemma":[0.99920654,0.0000210694,0.00014482049,0.0004783444,0.00007519514,0.00007401153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006551907,0.00021957562,0.0005622818,0.000399912,0.000046122645,0.0000017673245,0.00023990673,0.00034361813,0.00006884003],"category_scores_gemma":[0.000063869345,0.0002254479,0.00041599924,0.000719933,0.00024341849,0.0000025608658,0.000031847838,0.00013735348,8.2078054e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007527862,0.00006253183,0.078757234,0.000014285387,0.00044179533,0.000034510278,0.0001113798,0.0038013821,0.916468,0.000055112374,1.4147456e-7,0.00017831477],"study_design_scores_gemma":[0.00053161697,0.0001351408,0.050738614,0.0000057970874,0.00045107456,0.000020085174,0.000034464596,0.00087007,0.9436129,0.00008741333,0.0032036656,0.0003092111],"about_ca_topic_score_codex":0.0001031785,"about_ca_topic_score_gemma":0.00007539246,"teacher_disagreement_score":0.24035385,"about_ca_system_score_codex":0.00001813597,"about_ca_system_score_gemma":0.000078526085,"threshold_uncertainty_score":0.9193499},"labels":[],"label_agreement":null},{"id":"W148793297","doi":"10.1007/978-1-59745-540-4_1","title":"Comparative Genome Hybridization on Tiling Microarrays to Detect Aneuploidies in Yeast","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Comparative genomic hybridization; Biology; Genome; DNA microarray; Tiling array; Copy-number variation; Computational biology; Genome instability; Genetics; Copy number analysis; Gene; DNA","score_opus":0.0382549158398824,"score_gpt":0.3544619865240981,"score_spread":0.3162070706842157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W148793297","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97023386,0.00018172541,0.027801706,0.0008623765,0.00005847582,0.00023116352,0.0000134026095,0.00001927274,0.00059800374],"genre_scores_gemma":[0.83160233,0.000012206759,0.16751668,0.0007620809,0.00004131257,0.000015462283,0.000031890697,6.0774073e-7,0.0000174124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987984,0.00047247793,0.00019376185,0.00028759526,0.000039931016,0.00020785925],"domain_scores_gemma":[0.9997332,0.0001126555,0.000036726742,0.000051058163,0.000025468134,0.00004091078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032937835,0.00010664727,0.00020084242,0.000046205918,0.000044528017,0.000013184909,0.00014032805,0.00007640221,0.000038093818],"category_scores_gemma":[0.00011298051,0.000050988314,0.000038253656,0.00045165664,0.000022496772,0.000012265951,0.000030565694,0.000096738135,0.00001496993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001618233,0.000031835065,0.0004371511,4.9374677e-7,0.0000022136867,0.000004240274,0.00013986744,0.0006093046,0.969567,0.00035003596,0.0000012141577,0.028840465],"study_design_scores_gemma":[0.00023115521,0.0010514393,0.2265126,0.000019247553,0.0000051274683,0.0000080536865,0.00013368366,0.00031057178,0.7499088,0.017260157,0.0042664288,0.00029273456],"about_ca_topic_score_codex":0.0000571615,"about_ca_topic_score_gemma":0.00035458012,"teacher_disagreement_score":0.22607544,"about_ca_system_score_codex":0.000030944102,"about_ca_system_score_gemma":0.00000476041,"threshold_uncertainty_score":0.2079243},"labels":[],"label_agreement":null},{"id":"W149315227","doi":"10.1007/978-1-61779-370-7_15","title":"Biodistribution and Shedding of AAV Vectors","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Biodistribution; Vector (molecular biology); Computational biology; Capsid; Preclinical research; Medicine; Pharmacology; Biology; Bioinformatics; In vivo; Virology; Recombinant DNA; Biotechnology; Genetics; Virus; Gene","score_opus":0.04220180393356657,"score_gpt":0.40863400340775,"score_spread":0.3664321994741835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W149315227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72565573,0.0015734801,0.2720608,0.000020436632,0.00006562528,0.00013115174,0.000013176051,0.0000057260113,0.00047388131],"genre_scores_gemma":[0.741596,0.00023611388,0.257942,0.00008672334,0.0000237223,0.00002398309,0.000054822598,0.000018463597,0.000018197186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982705,0.00081634196,0.00023965737,0.0003519515,0.00004966771,0.00027184366],"domain_scores_gemma":[0.99947006,0.000028769757,0.00007117491,0.00031922487,0.00005472291,0.000056037163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011386423,0.0001321082,0.00020304511,0.00012603973,0.000024864827,0.000003264042,0.0001873208,0.00022806172,0.00003615776],"category_scores_gemma":[0.0002914533,0.0001272535,0.00006182096,0.00017358547,0.0002611152,0.0000016093301,0.00015298366,0.00011356843,0.0000013147976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038885337,0.000039732357,0.00788396,0.000011204434,0.000035116267,0.0000037867517,0.000047286565,0.0000024589115,0.97575265,0.00065229804,0.0000064805727,0.01517617],"study_design_scores_gemma":[0.00038670807,0.0014645566,0.0016125365,0.0000061572787,0.000007031485,0.000007859008,0.000029043626,0.00003184769,0.9936784,0.0020830596,0.0005646074,0.000128198],"about_ca_topic_score_codex":0.000047267025,"about_ca_topic_score_gemma":0.000024734329,"teacher_disagreement_score":0.017925741,"about_ca_system_score_codex":0.00001279375,"about_ca_system_score_gemma":0.00004243875,"threshold_uncertainty_score":0.5189247},"labels":[],"label_agreement":null},{"id":"W1494227505","doi":"10.1007/978-1-61779-501-5","title":"Plant Fungal Pathogens","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Wageningen University and Research; Agriculture and Agri-Food Canada; Université de Montpellier; Agricultural Research Service; Max-Planck-Institut für Terrestrische Mikrobiologie; Danmarks Tekniske Universitet; Chinese Academy of Sciences; Universiteit van Amsterdam; Murdoch University; Directorate for Biological Sciences; Rijksuniversiteit Groningen; Aalborg Universitet; Curtin University of Technology; Broad Institute; Pennsylvania State University; West Chester University; Australian National University; North Dakota State University; Universiteit Leiden; U.S. Department of Agriculture; Massachusetts Institute of Technology; Helsingin Yliopisto; National Key Laboratory of Plant Molecular Genetics; Urmia University; Virginia Polytechnic Institute and State University; Iowa State University","keywords":"Flora (microbiology); Biology; Ecological niche; Litter; Microbiology; Niche; Botany; Ecology; Bacteria; Genetics; Habitat","score_opus":0.02471196360094106,"score_gpt":0.3193273032196621,"score_spread":0.294615339618721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1494227505","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013117968,0.03141677,0.44617796,0.00003300189,0.0018337226,0.0012313577,0.011748563,0.00009270481,0.5061541],"genre_scores_gemma":[0.00028512158,0.0038018543,0.70120233,0.0022664638,0.0011946927,0.00030891108,0.017798988,0.00042788844,0.27271375],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965792,0.00094049907,0.00056925823,0.0011367331,0.00011054773,0.00066379434],"domain_scores_gemma":[0.9985113,0.00006411455,0.0002504164,0.00090890145,0.00007231468,0.00019291957],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00078674173,0.0006257387,0.00072587124,0.00026454712,0.000051416973,0.00001478362,0.00061356835,0.0015070145,0.00013255968],"category_scores_gemma":[0.00028110735,0.00060638186,0.00042561625,0.00008493548,0.00023287909,0.0000015741697,0.00042480679,0.00048579613,0.000044509205],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014631881,0.00008237788,0.0005528204,0.000054763525,0.00017436635,0.0004841768,0.000013795302,0.0000037764303,0.98234886,0.0054103867,0.004060811,0.006667572],"study_design_scores_gemma":[0.00075187645,0.0007816609,0.00044842254,0.000117407464,0.00020782482,0.0003264135,0.000009343287,0.000019845562,0.103660315,0.014580166,0.87759733,0.001499401],"about_ca_topic_score_codex":0.000010247017,"about_ca_topic_score_gemma":0.000028110997,"teacher_disagreement_score":0.8786885,"about_ca_system_score_codex":0.00005002201,"about_ca_system_score_gemma":0.00041985748,"threshold_uncertainty_score":0.99978924},"labels":[],"label_agreement":null},{"id":"W14947233","doi":"10.1007/978-1-61779-885-6_24","title":"Quantitative Redox Proteomics: The NOxICAT Method","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institute for Theoretical Astrophysics","keywords":"Cysteine; Thiol; Chemistry; Redox; Glutathione; Thioredoxin; Oxidative stress; Reactive oxygen species; Oxidative phosphorylation; Biochemistry; Combinatorial chemistry; Enzyme; Organic chemistry","score_opus":0.02900825534609915,"score_gpt":0.44511020558721587,"score_spread":0.41610195024111674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W14947233","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.079105966,0.0040402277,0.9133297,0.000482271,0.0003858737,0.0004524887,0.000015094432,0.000013311645,0.0021750731],"genre_scores_gemma":[0.05039954,0.00015668896,0.94770277,0.0010480689,0.00016926913,0.0002052812,0.000080177946,0.000028991597,0.00020923726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99437356,0.004117669,0.00034921346,0.00048983155,0.00005707653,0.0006126308],"domain_scores_gemma":[0.9988251,0.0002416614,0.00015317491,0.0006264551,0.00006692462,0.00008668146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031906331,0.00026419535,0.00030813908,0.00008644205,0.00010728654,0.000010046201,0.000500786,0.00044856744,0.000027731989],"category_scores_gemma":[0.0011146275,0.00018004588,0.00015682406,0.00022881135,0.0004434695,0.000005233364,0.00029587487,0.00034046845,0.000016954087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000128186,0.000062049774,0.00805402,0.000005782293,0.00008455181,0.0000019389447,0.00012604742,0.000017715425,0.9634689,0.021530561,0.0000959293,0.0064242803],"study_design_scores_gemma":[0.00036730495,0.00034655147,0.0023696767,0.000006671729,0.000021389378,0.000035284476,0.00019747534,0.000073324234,0.9634817,0.0045472337,0.028283916,0.00026942883],"about_ca_topic_score_codex":0.000025801115,"about_ca_topic_score_gemma":0.000012587154,"teacher_disagreement_score":0.034373045,"about_ca_system_score_codex":0.0000188573,"about_ca_system_score_gemma":0.00004605667,"threshold_uncertainty_score":0.73420584},"labels":[],"label_agreement":null},{"id":"W1501174915","doi":"10.1007/978-1-61779-800-9_11","title":"Assessment of Sphingosine-1-Phosphate Receptor Expression and Associated Intracellular Signaling Cascades in Primary Cells of the Human Central Nervous System","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"","keywords":"Sphingosine-1-phosphate; Intracellular; Receptor; Sphingosine; Sphingosine-1-phosphate receptor; Signal transduction; Cell biology; Sphingosine kinase; Central nervous system; Biology; Neuroscience; Chemistry; Biochemistry","score_opus":0.012266978453403002,"score_gpt":0.3205282404912883,"score_spread":0.3082612620378853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1501174915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9306296,0.004275562,0.06432279,0.000009258647,0.00037596808,0.00027691748,0.000013063692,0.0000060905704,0.00009073126],"genre_scores_gemma":[0.8823654,0.00007305021,0.117367506,0.000045262437,0.00006552506,0.000016569787,0.00003381359,0.000023095612,0.000009769209],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967884,0.0016986551,0.0006257026,0.00032342938,0.00011555158,0.0004482554],"domain_scores_gemma":[0.9990839,0.00007953059,0.00038196743,0.000333066,0.0000525224,0.00006906052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023924035,0.00020720717,0.0004919009,0.00010087716,0.00004809221,0.0000068120166,0.00026787838,0.00034941532,0.000005414614],"category_scores_gemma":[0.0001852911,0.00016431454,0.00011864626,0.00021245671,0.00015555936,0.0000067066076,0.0002643838,0.00023397162,7.174634e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016670492,0.00009628967,0.067293204,0.000107906504,0.000031831165,0.0000012716903,0.0001593416,0.0002973364,0.9308956,0.0005121211,0.0000031138334,0.000585281],"study_design_scores_gemma":[0.00063800666,0.000059508646,0.033060107,0.00014416507,0.000028452972,0.0000033728616,0.00013834675,0.00010867147,0.96548474,0.000042991272,0.00013203938,0.00015962358],"about_ca_topic_score_codex":0.00010952191,"about_ca_topic_score_gemma":0.000003465811,"teacher_disagreement_score":0.053044718,"about_ca_system_score_codex":0.000052688603,"about_ca_system_score_gemma":0.00005660907,"threshold_uncertainty_score":0.6700552},"labels":[],"label_agreement":null},{"id":"W1503889215","doi":"10.1007/978-1-60761-454-8_13","title":"Characterization of Lipid-Linked Oligosaccharides by Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta; National Research Council Canada","funders":"","keywords":"Campylobacter jejuni; Glycomics; Glycosylation; Biochemistry; Chemistry; Mass spectrometry; Glycoprotein; Bacteria; Glycan; Biology; Chromatography","score_opus":0.015315029834072071,"score_gpt":0.3693777709752805,"score_spread":0.35406274114120845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1503889215","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34199625,0.0002458599,0.6566359,0.00025245844,0.000063503765,0.00019374576,0.00002444333,0.000008014193,0.00057984167],"genre_scores_gemma":[0.5441664,0.00029715468,0.4539573,0.0005941395,0.000088600755,0.000027072081,0.0005103215,0.000021917916,0.00033712565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982037,0.0006380958,0.00035749603,0.00039218663,0.00009708227,0.00031144448],"domain_scores_gemma":[0.9993428,0.000021631702,0.0001212069,0.0003651723,0.000084200154,0.000064986074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079249317,0.00015885054,0.0002570957,0.00020951075,0.000025920745,0.000010180091,0.0002685105,0.00029954154,0.00006961651],"category_scores_gemma":[0.00039396182,0.00015630768,0.000090390524,0.00035198868,0.000091023656,0.00000353365,0.00005591098,0.00015772865,0.000003970192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070643124,0.000066889865,0.00091885787,0.000008073683,0.000017284054,0.0000024891979,0.000010857878,0.000004327812,0.98751444,0.000794434,0.000029769248,0.010561911],"study_design_scores_gemma":[0.00043841766,0.00047320893,0.002119178,0.000006788734,0.000003828457,0.000004514717,0.000007124838,0.00009548691,0.98932254,0.0014926468,0.005883302,0.00015297928],"about_ca_topic_score_codex":0.0000099399085,"about_ca_topic_score_gemma":0.0000013549181,"teacher_disagreement_score":0.20267859,"about_ca_system_score_codex":0.000017285593,"about_ca_system_score_gemma":0.000044903638,"threshold_uncertainty_score":0.6374042},"labels":[],"label_agreement":null},{"id":"W1505500150","doi":"10.1007/978-1-62703-056-4_2","title":"Epi-Fluorescence Microscopy","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":90,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Mental Health; National Institutes of Health; National Institute of General Medical Sciences; McGill University","keywords":"Dichroic glass; Optics; Microscope; Fluorescence; Microscopy; Materials science; Fluorescence microscope; Light sheet fluorescence microscopy; Dichroic filter; Fluorescence-lifetime imaging microscopy; Deconvolution; Optoelectronics; Physics; Light source","score_opus":0.015922565322575924,"score_gpt":0.4250438255883319,"score_spread":0.409121260265756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1505500150","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031332437,0.003763132,0.9634046,0.00006904878,0.00034562044,0.00028746342,0.000009470356,0.000047139154,0.00074106577],"genre_scores_gemma":[0.025119975,0.00023863443,0.9735505,0.00065057667,0.0001324645,0.00009130836,0.00005835453,0.000049860722,0.00010831551],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974459,0.0007807307,0.0003593576,0.0005369139,0.000063982916,0.0008131383],"domain_scores_gemma":[0.998983,0.00004137415,0.000106819476,0.000681706,0.000052426905,0.0001346349],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011690728,0.0002867955,0.00029599536,0.00013246863,0.000052145475,0.000010625396,0.0004583899,0.00042105743,0.000028488535],"category_scores_gemma":[0.00051511097,0.00028599644,0.0001140106,0.00024621325,0.0003315683,0.0000075960784,0.00032651518,0.00026553834,0.000016234198],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039140246,0.00007760039,0.023310883,0.000008617612,0.00001340283,0.000003293369,0.00003219547,0.000002861968,0.96165264,0.0015885124,0.0001422763,0.013128603],"study_design_scores_gemma":[0.00023672546,0.00015118206,0.0007727608,0.000013551335,0.0000070727037,0.000027563558,0.000019205616,0.000009645511,0.9685777,0.0016574551,0.028211435,0.0003157479],"about_ca_topic_score_codex":0.00001876341,"about_ca_topic_score_gemma":0.0000031062732,"teacher_disagreement_score":0.028069159,"about_ca_system_score_codex":0.000042177653,"about_ca_system_score_gemma":0.000045429013,"threshold_uncertainty_score":0.99995923},"labels":[],"label_agreement":null},{"id":"W1507315797","doi":"10.1007/978-1-61779-139-0_16","title":"Use of Colloidal Silica-Beads for the Isolation of Cell-Surface Proteins for Mass Spectrometry-Based Proteomics","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Membrane; Chemistry; Chromatography; Colloidal silica; Ultracentrifuge; Bead; Centrifugation; Electrophoresis; Lysis; Mass spectrometry; Protein purification; Biochemistry; Materials science; Coating; Organic chemistry","score_opus":0.05101772245095251,"score_gpt":0.3709023589263976,"score_spread":0.31988463647544507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1507315797","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.033202067,0.000054697666,0.9643674,0.000057019835,0.000013193157,0.0020175644,0.00014371544,0.000023452849,0.000120889374],"genre_scores_gemma":[0.038050514,0.000008942003,0.96029425,0.000028769104,0.000009744403,0.0015122372,0.000026458192,0.000027517755,0.00004160092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901146,0.00009098207,0.00039465036,0.000263894,0.000039967912,0.00019906132],"domain_scores_gemma":[0.9985074,0.0005438754,0.00033732667,0.0004621844,0.00012735145,0.000021870761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005898236,0.00013333299,0.00026727977,0.00005381914,0.000040874114,0.0000035299743,0.00027445622,0.0002214847,0.000014417504],"category_scores_gemma":[0.0003313884,0.000110833265,0.00014014178,0.00019091966,0.00014569455,0.000018435418,0.00003872921,0.00012964787,7.51462e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018604872,0.00008791468,0.0004717408,0.00009837799,0.000016756116,7.847945e-8,0.000027560434,0.00026272266,0.98865056,0.009914606,0.0000019690704,0.00028164618],"study_design_scores_gemma":[0.00037696533,0.00016423258,0.000010187044,0.0000122906185,0.000026551026,3.4262982e-7,0.000016713075,0.008032741,0.96971667,0.021306423,0.000226616,0.00011029354],"about_ca_topic_score_codex":0.000056112152,"about_ca_topic_score_gemma":0.000003330745,"teacher_disagreement_score":0.018933935,"about_ca_system_score_codex":0.00004998374,"about_ca_system_score_gemma":0.000055944995,"threshold_uncertainty_score":0.4519649},"labels":[],"label_agreement":null},{"id":"W150741976","doi":"10.1007/978-1-4939-2428-8_29","title":"Evidence-Based Decision-Making 7: Knowledge Translation","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Policy Implementation Science","field":"Health Professions","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bridging (networking); Knowledge translation; Knowledge management; Identification (biology); Context (archaeology); Knowledge value chain; Computer science; Organizational learning; Geography","score_opus":0.8538074420555971,"score_gpt":0.7814196465380838,"score_spread":0.07238779551751329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W150741976","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016186383,0.00078493234,0.97489,0.0035397597,0.0009070144,0.0007039118,0.000005409119,0.000054285858,0.0029283133],"genre_scores_gemma":[0.08908164,0.000014595848,0.90000415,0.010568523,0.000082946965,0.0002071315,0.000002555718,0.000016008193,0.00002242991],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98474675,0.013147015,0.00090008863,0.0004014248,0.00016077602,0.0006439454],"domain_scores_gemma":[0.9804595,0.018483168,0.00022353644,0.00038300606,0.00025054408,0.00020024626],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.017437896,0.00013580755,0.00029678777,0.00042366315,0.00017723937,0.0000061277124,0.0003341187,0.00026263113,0.00022960229],"category_scores_gemma":[0.026562372,0.00012191686,0.000048227328,0.00092293776,0.00011328226,0.00010227765,0.00008469837,0.00043837167,0.00017935372],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017464183,0.00004301676,0.037445486,0.00011460773,0.0000073278984,0.000012136506,0.011980094,0.00026821872,0.052585505,0.006874856,0.001075777,0.8894183],"study_design_scores_gemma":[0.010735447,0.0013763123,0.021160897,0.0044535133,0.00006509346,0.0000124899325,0.0066198423,0.053038854,0.015673773,0.3198336,0.56531787,0.0017122929],"about_ca_topic_score_codex":0.00009029941,"about_ca_topic_score_gemma":0.00018046735,"teacher_disagreement_score":0.88770604,"about_ca_system_score_codex":0.00033408814,"about_ca_system_score_gemma":0.001581396,"threshold_uncertainty_score":0.9816373},"labels":[],"label_agreement":null},{"id":"W1510468079","doi":"10.1007/978-1-4939-2727-2_12","title":"Oncolytic Viral Therapy Using Reovirus","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Oncolytic virus; Cancer research; Biology; Cancer; Tumor microenvironment; Cancer cell; Immunology; Virus; Immune system","score_opus":0.1711137852704419,"score_gpt":0.5457892297247489,"score_spread":0.37467544445430695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1510468079","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003179719,0.9413504,0.05613878,0.000010049812,0.00040675869,0.0012051648,0.000044446042,0.000023037193,0.00050341873],"genre_scores_gemma":[0.0000016034264,0.8352921,0.16328828,0.00022833297,0.00030654512,0.00020312669,0.00029335855,0.00018267237,0.00020398674],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98898464,0.007569671,0.0009413266,0.0013298037,0.00022277258,0.0009517928],"domain_scores_gemma":[0.9976113,0.000116117284,0.00037539625,0.001524506,0.0001520861,0.0002205921],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0043474776,0.0008148966,0.0020848098,0.0005290749,0.00006657837,0.00003656095,0.0011859341,0.0016284641,0.00005043845],"category_scores_gemma":[0.00044850225,0.0007070003,0.0007165762,0.00059808913,0.00035646022,0.000002982401,0.00052261224,0.0008398842,0.000032775697],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028699424,0.000081677805,0.000003443041,0.00032201028,0.0002592188,0.00005046731,0.000010143179,0.000015738593,0.15388991,0.00004377148,0.000058547586,0.8449781],"study_design_scores_gemma":[0.00080777984,0.0025019736,1.1145686e-7,0.0003538435,0.000098251854,0.00009400263,0.0000059194554,0.00003117325,0.025438823,0.00078492594,0.96912086,0.0007623555],"about_ca_topic_score_codex":0.000046554196,"about_ca_topic_score_gemma":0.00002321811,"teacher_disagreement_score":0.96906227,"about_ca_system_score_codex":0.00026517423,"about_ca_system_score_gemma":0.0015557624,"threshold_uncertainty_score":0.99966764},"labels":[],"label_agreement":null},{"id":"W1515040117","doi":"10.1007/978-1-59745-483-4_10","title":"Nanopore Force Spectroscopy on DNA Duplexes","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanopore and Nanochannel Transport Studies","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Nanopore; Force spectroscopy; Duplex (building); DNA; Dissociation (chemistry); Nucleic acid; Molecule; Chemistry; Förster resonance energy transfer; Chemical physics; Spectroscopy; Biophysics; Nanotechnology; Atomic force microscopy; Materials science; Fluorescence; Physics; Physical chemistry; Biology; Biochemistry","score_opus":0.013067590635273373,"score_gpt":0.3370840175378106,"score_spread":0.32401642690253724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1515040117","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08091844,0.0024391909,0.9064934,0.000282877,0.00047945883,0.00021775141,0.000007026395,0.00024091791,0.008920883],"genre_scores_gemma":[0.27779487,0.00061617355,0.72042584,0.0008256207,0.00009123796,0.000032203316,0.000025423686,0.00004204445,0.00014658728],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989135,0.00011742668,0.00025111096,0.0002647743,0.000053732187,0.00039944908],"domain_scores_gemma":[0.99961054,0.00006663746,0.0000229687,0.000244802,0.000013535745,0.0000415193],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034107472,0.00021664443,0.0003447166,0.00018486667,0.000035615743,0.000005006805,0.00016222523,0.00016326866,0.00002382642],"category_scores_gemma":[0.000039038507,0.0001957053,0.000090565685,0.00026647924,0.000051333474,0.000017644825,0.000011922755,0.00019150239,0.000007695677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016633152,0.000023679175,0.00019225903,0.0000099121735,0.000024067354,0.000047836635,0.000085289015,0.00064658653,0.9863869,0.0051745446,0.00008417742,0.007308146],"study_design_scores_gemma":[0.00030431346,0.00030666363,0.00060486933,0.000018969735,0.00001068641,0.000004302466,0.000015929236,0.00020963869,0.9631799,0.030831788,0.00428314,0.0002297991],"about_ca_topic_score_codex":0.0000037723694,"about_ca_topic_score_gemma":0.0000052969253,"teacher_disagreement_score":0.19687644,"about_ca_system_score_codex":0.00003669083,"about_ca_system_score_gemma":0.0000072124053,"threshold_uncertainty_score":0.79806304},"labels":[],"label_agreement":null},{"id":"W151608228","doi":"10.1007/978-1-62703-068-7_4","title":"Diabetes in Mice with Monogenic Obesity: The db/db Mouse and Its Use in the Study of Cardiac Consequences","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cardiovascular Function and Risk Factors","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Obesity; Diabetes mellitus; Internal medicine; Medicine; Endocrinology","score_opus":0.036639330255361466,"score_gpt":0.34662760033250534,"score_spread":0.30998827007714386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W151608228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9936803,0.004636045,0.0006322025,0.00012316907,0.00009834586,0.0007961628,0.0000030587782,0.0000064166125,0.000024309731],"genre_scores_gemma":[0.99395984,0.00026204658,0.0054288288,0.00023859256,0.000017995464,0.00006787583,0.000003148848,0.000010394023,0.000011296785],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9952643,0.003940909,0.00023461727,0.00020873317,0.00010688829,0.00024453428],"domain_scores_gemma":[0.99897146,0.000588357,0.000058836962,0.00030979523,0.00003517221,0.000036382065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031485884,0.0001321655,0.0004558255,0.00016647013,0.00002475071,0.0000069462676,0.0001019654,0.00010622322,0.0000034348243],"category_scores_gemma":[0.00052222237,0.000065852175,0.000087556495,0.00038783907,0.00019231305,0.00003352715,0.000052109237,0.00028477985,6.0054964e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048636517,0.00017928315,0.8562116,0.000011547678,0.00015683242,0.000009776268,0.0015400441,0.000016744769,0.14051718,0.000113048336,0.0000018304218,0.0011935013],"study_design_scores_gemma":[0.0016418456,0.0005859315,0.8791107,0.000029147719,0.00027278988,0.000033343895,0.0060894443,0.000054210785,0.111100286,0.000077600795,0.0008337896,0.00017092554],"about_ca_topic_score_codex":0.00083981943,"about_ca_topic_score_gemma":0.00028193922,"teacher_disagreement_score":0.029416893,"about_ca_system_score_codex":0.000024761197,"about_ca_system_score_gemma":0.000030339475,"threshold_uncertainty_score":0.26853737},"labels":[],"label_agreement":null},{"id":"W151957004","doi":"10.1007/978-1-4939-2214-7_24","title":"Probing Hfq:RNA Interactions with Hydroxyl Radical and RNase Footprinting","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Footprinting; RNase P; Chemistry; DNA footprinting; Hydroxyl radical; RNA; Combinatorial chemistry; Biophysics; Biochemistry; Radical; Biology; DNA; Transcription factor; Gene; Base sequence; DNA-binding protein","score_opus":0.014551069568690034,"score_gpt":0.33568017454576027,"score_spread":0.32112910497707026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W151957004","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31050032,0.00024217066,0.6875057,0.00016160257,0.00008115999,0.00015757247,6.265517e-7,0.000012027376,0.0013388003],"genre_scores_gemma":[0.40695477,0.000026063364,0.59251696,0.00027279323,0.0000689634,0.000059809114,0.000007794645,0.000024088678,0.00006873185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782497,0.0010755315,0.00023859904,0.0005013523,0.000050669452,0.00030886545],"domain_scores_gemma":[0.99935263,0.00009687793,0.00009583259,0.00034207545,0.000029172399,0.00008341452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012145934,0.00018928664,0.00024099778,0.000098228644,0.00007222293,0.000020428975,0.00017266415,0.00018980255,0.000011243101],"category_scores_gemma":[0.0005015702,0.00016004402,0.000056688503,0.00010183504,0.00015612668,0.000002991203,0.00015889262,0.00018191471,0.0000016133852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050174043,0.000024066434,0.0007021205,0.0000115228,0.000030981482,0.0000055040564,0.000027551048,0.000022767821,0.92477053,0.003050444,0.0000030514848,0.07130131],"study_design_scores_gemma":[0.0004486675,0.00035428075,0.000094259725,0.000032394935,0.000015925878,0.0000770011,0.000029184086,0.00027005983,0.9786957,0.0038509695,0.015906978,0.00022461021],"about_ca_topic_score_codex":0.000021751022,"about_ca_topic_score_gemma":0.000014307163,"teacher_disagreement_score":0.09645446,"about_ca_system_score_codex":0.000010544032,"about_ca_system_score_gemma":0.000025754902,"threshold_uncertainty_score":0.6526406},"labels":[],"label_agreement":null},{"id":"W1521296718","doi":"10.1007/978-1-62703-281-0_2","title":"Ultradense Array CGH and Discovery of Micro-Copy Number Alterations and Gene Fusions in the Cancer Genome","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"U.S. National Library of Medicine","keywords":"Comparative genomic hybridization; Computational biology; Genome; Biology; Copy-number variation; Copy number analysis; Gene; Genetics; Bioinformatics","score_opus":0.012195250009099084,"score_gpt":0.3449930100972991,"score_spread":0.3327977600882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1521296718","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87862307,0.0040442306,0.116131924,0.00062359683,0.000076601726,0.0002805543,0.000058239406,0.0000013791722,0.00016040549],"genre_scores_gemma":[0.76623994,0.004843698,0.22737968,0.0011828688,0.000068469875,0.00016591062,0.000067287554,0.000016928929,0.00003521767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882156,0.00037416353,0.0002496421,0.00032513365,0.000031470012,0.00019805359],"domain_scores_gemma":[0.9994597,0.00012303758,0.00006703702,0.00028468866,0.000032704844,0.00003285094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003689712,0.000129688,0.00019033492,0.000050714763,0.000036250294,0.000026064003,0.00014998649,0.00014381326,0.000015158055],"category_scores_gemma":[0.00015950022,0.00010251328,0.00003992038,0.000103685394,0.00019979759,0.00000390926,0.00009542129,0.00010887967,6.324269e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012401594,0.000033764027,0.021415954,0.000008530933,0.00001871942,0.0000022470022,0.00018424915,0.000035338846,0.9764699,0.0005611929,0.000025772095,0.001231968],"study_design_scores_gemma":[0.00059011776,0.00012112806,0.028245263,0.000010835566,0.000022190352,0.000041882256,0.0001498466,0.000023321281,0.9633984,0.004135355,0.0030556717,0.00020600026],"about_ca_topic_score_codex":0.0006120679,"about_ca_topic_score_gemma":0.00022932963,"teacher_disagreement_score":0.11238313,"about_ca_system_score_codex":0.000011134056,"about_ca_system_score_gemma":0.000050729177,"threshold_uncertainty_score":0.41803703},"labels":[],"label_agreement":null},{"id":"W1523483559","doi":"10.1007/978-1-60327-483-8_8","title":"Cre Recombinase Mediated Alterations of the Mouse Genome Using Embryonic Stem Cells","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute","keywords":"Cre recombinase; Recombinase; Cre-Lox recombination; Biology; Homologous recombination; Site-specific recombination; Genetics; Genome; FLP-FRT recombination; DNA; Gene; Embryonic stem cell; Gene targeting; Transgene; Recombination; Genetic recombination; Genetically modified mouse","score_opus":0.042777558780593326,"score_gpt":0.43435618947046845,"score_spread":0.39157863068987514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1523483559","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047246768,0.7222738,0.27638605,0.00000487884,0.00025317277,0.0004890675,0.000075386044,0.0000070479564,0.00003808813],"genre_scores_gemma":[0.000015231419,0.8808563,0.11849046,0.000038532544,0.000058715323,0.000057219808,0.00021065476,0.00007311054,0.00019981674],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99656934,0.0016720177,0.00072094495,0.00058389077,0.000077918616,0.00037586846],"domain_scores_gemma":[0.99850065,0.00008905248,0.00032641838,0.0009537261,0.00006323248,0.00006691716],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004876616,0.00042585458,0.001044206,0.00018263899,0.000060071467,0.000007847838,0.0006076846,0.0007304733,0.000011998863],"category_scores_gemma":[0.00013197472,0.00033284596,0.0005690072,0.00038740024,0.00016617004,0.0000012673621,0.0003636479,0.0003796468,0.0000022647503],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003510203,0.000049742885,0.0000048394586,0.0008272715,0.00017504078,0.000008647178,0.000021648175,0.0007975749,0.94623023,0.000036845035,0.000028959574,0.05181567],"study_design_scores_gemma":[0.00030202317,0.00012639623,0.0000013759907,0.0003139986,0.00018558296,0.000118962445,0.000011131287,0.00015026059,0.28048867,0.000022220043,0.71776056,0.00051879976],"about_ca_topic_score_codex":0.000015123162,"about_ca_topic_score_gemma":0.000007648749,"teacher_disagreement_score":0.7177316,"about_ca_system_score_codex":0.00005206163,"about_ca_system_score_gemma":0.00028003435,"threshold_uncertainty_score":0.9999124},"labels":[],"label_agreement":null},{"id":"W1523775075","doi":"10.1007/978-1-59745-133-8_8","title":"Olfactory Ensheathing Cells: Isolation and Culture from the Neonatal Olfactory Bulb","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Olfactory and Sensory Function Studies","field":"Neuroscience","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Olfactory ensheathing glia; Olfactory bulb; Olfactory epithelium; Olfactory system; Cribriform plate; Olfactory mucosa; Biology; Neurogenesis; Neuroscience; Olfactory receptor; Olfactory nerve; Olfactory Receptor Cell; Transplantation; Olfactory tubercle; Vomeronasal organ; Anatomy; Central nervous system; Medicine","score_opus":0.1494427402462995,"score_gpt":0.34643755085030153,"score_spread":0.19699481060400204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1523775075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6163281,0.0016911154,0.37999004,0.0002919063,0.0008775923,0.00019404649,0.000034526543,0.0000627472,0.0005298991],"genre_scores_gemma":[0.8613326,0.0006881442,0.13349898,0.0037689342,0.00017166062,0.00002437246,0.0000133923395,0.00003083116,0.00047106956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966592,0.0022078904,0.00025262884,0.0005266147,0.0000979693,0.000255677],"domain_scores_gemma":[0.9983821,0.0011795651,0.00009119912,0.00027533356,0.000024249191,0.000047562076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004053501,0.00019901089,0.00025274474,0.00006535988,0.00036158218,0.000015550244,0.00018081753,0.00019878862,0.000054513228],"category_scores_gemma":[0.000992041,0.00013713673,0.000071974166,0.00016496792,0.00046444422,0.000077231714,0.0001305,0.00045922084,0.000015151527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030285222,0.000013811315,0.0047008484,0.0000025503455,0.000009528192,0.00003831662,0.0038288021,0.000021061995,0.98799276,0.00029766336,0.00010830044,0.0029560858],"study_design_scores_gemma":[0.0004990161,0.00011587098,0.007138094,0.000010067186,0.000017631486,0.000061187886,0.0005645205,0.00036417585,0.9174718,0.0035290716,0.069921486,0.0003070433],"about_ca_topic_score_codex":0.00004705951,"about_ca_topic_score_gemma":0.000009012223,"teacher_disagreement_score":0.24649107,"about_ca_system_score_codex":0.000029300256,"about_ca_system_score_gemma":0.000020320176,"threshold_uncertainty_score":0.55922735},"labels":[],"label_agreement":null},{"id":"W1526348192","doi":"10.1007/978-1-60327-492-0_15","title":"Mammographic Density: A Heritable Risk Factor for Breast Cancer","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Digital Radiography and Breast Imaging","field":"Medicine","cited_by":114,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; Hospital for Sick Children; University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"MAMMOGRAPHIC DENSITY; Breast cancer; Medicine; Cancer; Oncology; Internal medicine; Mammography","score_opus":0.044743228650544815,"score_gpt":0.4361555219320246,"score_spread":0.3914122932814798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1526348192","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000018900808,0.8149421,0.18211982,0.000044225042,0.00030715772,0.0011500326,0.0011585428,0.00005495318,0.00020424798],"genre_scores_gemma":[0.0000043927394,0.7283202,0.27088198,0.00014142036,0.00010462958,0.00034968808,0.000067700945,0.00007494807,0.0000550786],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968398,0.000936484,0.0006555112,0.00080215046,0.000098557226,0.0006674817],"domain_scores_gemma":[0.99842465,0.00042442244,0.0003308938,0.0005417288,0.00010743534,0.00017084555],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004913727,0.0005682081,0.0026266023,0.0009390591,0.00006596254,0.000020616386,0.0002469205,0.0006159852,0.00004559526],"category_scores_gemma":[0.0002420907,0.00044574542,0.0015601075,0.0011226607,0.00027956965,0.000037485126,0.00009234341,0.0006793746,0.0000031491863],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040992698,0.00008528412,0.0010653934,0.0030575728,0.000595436,0.00011396116,0.000011699423,1.4105773e-7,0.00010580777,0.00010899039,0.00002407985,0.9947906],"study_design_scores_gemma":[0.00085124804,0.00019649114,0.00048226622,0.004804761,0.0012664995,0.003854301,0.000006243701,0.000011720056,0.00006913304,0.0011922655,0.98661363,0.0006514144],"about_ca_topic_score_codex":0.000119020384,"about_ca_topic_score_gemma":0.000011382207,"teacher_disagreement_score":0.99413925,"about_ca_system_score_codex":0.000096014664,"about_ca_system_score_gemma":0.00030334288,"threshold_uncertainty_score":0.99979943},"labels":[],"label_agreement":null},{"id":"W152662877","doi":"10.1007/978-1-60327-192-9_10","title":"Methylation Analysis by DNA Immunoprecipitation (MeDIP)","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Centre for Applied Research in Cancer Control; Occupational Cancer Research Centre; BC Cancer Agency","funders":"National Institute of Dental and Craniofacial Research","keywords":"Methylated DNA immunoprecipitation; DNA methylation; Biology; Epigenetics; Bisulfite sequencing; Epigenomics; Differentially methylated regions; Illumina Methylation Assay; Genetics; Gene; Computational biology; Gene expression","score_opus":0.01121606051578755,"score_gpt":0.3788340960953748,"score_spread":0.3676180355795872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W152662877","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21038578,0.004379205,0.78387207,0.00020602191,0.000111762674,0.00015287116,0.000009071412,0.000012307391,0.000870926],"genre_scores_gemma":[0.58968574,0.0003884333,0.40840936,0.0003638352,0.00005676687,0.0000247146,0.0009155511,0.000017279994,0.00013830126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974908,0.0011512204,0.00042739074,0.0005332531,0.000095197625,0.0003021395],"domain_scores_gemma":[0.99918145,0.00006137541,0.00015614592,0.00044773342,0.000089672525,0.00006360721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014677565,0.00020030446,0.00030197256,0.0002991701,0.000048319795,0.000019158138,0.00021083251,0.00037002994,0.000023922568],"category_scores_gemma":[0.00046735705,0.00020495176,0.00018464879,0.0006875313,0.00006172231,0.0000041540675,0.000046439487,0.00013261249,0.0000032295961],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000293143,0.000050919214,0.0018849159,0.0000016486996,0.00011272587,9.5346263e-7,0.000035770143,0.0004915046,0.93004555,0.00048817537,0.00002346651,0.06683505],"study_design_scores_gemma":[0.00038823968,0.00038314014,0.006092985,0.0000022263603,0.00010835215,5.665112e-7,0.000017180024,0.0008276225,0.97477037,0.010434299,0.006726855,0.00024817817],"about_ca_topic_score_codex":0.000028171935,"about_ca_topic_score_gemma":0.000015596905,"teacher_disagreement_score":0.3793,"about_ca_system_score_codex":0.000028516786,"about_ca_system_score_gemma":0.000028880131,"threshold_uncertainty_score":0.83576906},"labels":[],"label_agreement":null},{"id":"W1528503595","doi":"10.1007/978-1-59745-385-1_12","title":"Qualitative Research in Clinical Epidemiology","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Geriatric Care and Nursing Homes","field":"Health Professions","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Memorial University of Newfoundland; Health Sciences Centre","funders":"","keywords":"Grounded theory; Qualitative research; Hemodialysis; Perception; Epidemiology; Scale (ratio); Clinical Practice; Clinical epidemiology; Qualitative property; Disease; Psychology; Medicine; Family medicine; Internal medicine; Psychiatry; Sociology; Mathematics; Social science; Geography; Statistics","score_opus":0.8276348938132231,"score_gpt":0.8209379448339582,"score_spread":0.006696948979264872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1528503595","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009076614,0.9387409,0.05366104,0.00041043732,0.0026299334,0.0017010657,0.000021228743,0.000030212588,0.0027961144],"genre_scores_gemma":[1.7007295e-7,0.70090896,0.2976179,0.00019306727,0.00027947218,0.0006025182,0.00010622969,0.00004910472,0.00024257858],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.6437646,0.34989595,0.0038208857,0.0010594702,0.00010541026,0.0013536665],"domain_scores_gemma":[0.8855512,0.112376906,0.0008475078,0.00089202955,0.0001761805,0.00015613795],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.09623694,0.00044629668,0.006088467,0.0017077241,0.00019165361,0.0000015426314,0.0007353525,0.0038751124,0.00009799563],"category_scores_gemma":[0.040564507,0.00035265766,0.0007836837,0.0019016422,0.0009362053,0.000014277236,0.0005229939,0.007866176,0.0002654502],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026399866,0.000080645994,0.00028416092,0.0025529086,0.00005868642,0.00011810149,0.0025587366,1.0385238e-7,0.0000014431779,0.0069976235,0.0021204897,0.9852007],"study_design_scores_gemma":[0.00040564354,0.00022544479,0.000049129947,0.0039639208,0.000035491343,0.000017327227,0.0015366726,0.000001284513,2.0047318e-7,0.037988994,0.9554882,0.00028766156],"about_ca_topic_score_codex":0.0009314862,"about_ca_topic_score_gemma":0.00012166583,"teacher_disagreement_score":0.98491305,"about_ca_system_score_codex":0.0005587793,"about_ca_system_score_gemma":0.0016834759,"threshold_uncertainty_score":0.99989253},"labels":[],"label_agreement":null},{"id":"W153005692","doi":"10.1007/978-1-62703-281-0_20","title":"Array CGH in Brain Tumors","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Vancouver General Hospital","funders":"","keywords":"PTEN; Multiplex; Locus (genetics); Comparative genomic hybridization; Biology; Computational biology; Genome; Cancer research; Gene; Genetics","score_opus":0.010865442304223684,"score_gpt":0.3253489179864722,"score_spread":0.3144834756822485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W153005692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63716805,0.0005138785,0.35752583,0.0007926951,0.00014559178,0.0002844431,0.000006127242,0.000010183753,0.003553197],"genre_scores_gemma":[0.5744709,0.000027101201,0.4234077,0.0012340003,0.00006232621,0.00016741057,0.00007130138,0.00002353303,0.00053574913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980527,0.000780671,0.00035212253,0.000397302,0.00003901627,0.00037818053],"domain_scores_gemma":[0.99944097,0.00004857534,0.00006760424,0.0003517618,0.000037629543,0.000053467844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065718236,0.00017198063,0.00022972446,0.0001374594,0.0000263492,0.000016338434,0.00025161414,0.00023837363,0.00014375294],"category_scores_gemma":[0.00030570265,0.00016625084,0.000077117904,0.00017474897,0.00009767965,0.0000035353464,0.000109234,0.00014962826,0.000024834064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008167642,0.000040177798,0.015523222,0.0000067695855,0.000012792106,0.0000052318173,0.00007111294,0.000079506695,0.9784021,0.002458919,0.00010048858,0.003291561],"study_design_scores_gemma":[0.0007808084,0.00025570087,0.015659876,0.000014338469,0.000004477634,0.00003642483,0.00028320868,0.00007235278,0.9493498,0.018479068,0.014667754,0.00039617324],"about_ca_topic_score_codex":0.00035675554,"about_ca_topic_score_gemma":0.00007903424,"teacher_disagreement_score":0.06588186,"about_ca_system_score_codex":0.000025545476,"about_ca_system_score_gemma":0.000058650185,"threshold_uncertainty_score":0.6779513},"labels":[],"label_agreement":null},{"id":"W1533192692","doi":"10.1007/978-1-60327-009-0_1","title":"Human Embryogenesis: Overview","year":2009,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"Engineering ethics; Embryology; Biology; Embryogenesis; Embryo; Engineering; Anatomy; Cell biology","score_opus":0.08514503278215924,"score_gpt":0.44546096739018,"score_spread":0.36031593460802075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1533192692","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005525941,0.073482774,0.042275876,0.0010964179,0.0005923943,0.0013097756,0.00002299341,0.00012698553,0.8805402],"genre_scores_gemma":[0.00016721552,0.0012511363,0.4880234,0.0056765596,0.00041121687,0.000053480268,0.00031486523,0.00010758909,0.5039945],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99719554,0.0006992291,0.000628302,0.0010542957,0.00007869999,0.00034393088],"domain_scores_gemma":[0.99837124,0.00006420166,0.00020855515,0.0011207858,0.00014104399,0.000094190604],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017715171,0.0004344308,0.0012164203,0.0002888145,0.000044761127,0.0000034910215,0.00021440422,0.0014119971,0.0006207792],"category_scores_gemma":[0.00041736814,0.00037244236,0.0003694928,0.000059996102,0.00038037112,0.000009479458,0.00011300938,0.0008014753,0.00005947918],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051813666,0.00014015428,0.00050916313,0.00019613735,0.0004184471,0.0004465039,0.000023566088,3.965133e-7,0.57666636,0.15979165,0.0003260511,0.2609634],"study_design_scores_gemma":[0.0012489966,0.0014765488,0.016092496,0.0003725528,0.00050899526,0.00025052705,0.000003528954,0.00000235012,0.040776305,0.4397784,0.49861354,0.0008757808],"about_ca_topic_score_codex":0.000010661541,"about_ca_topic_score_gemma":0.0000031111247,"teacher_disagreement_score":0.5358901,"about_ca_system_score_codex":0.000104750165,"about_ca_system_score_gemma":0.00009214805,"threshold_uncertainty_score":0.99988437},"labels":[],"label_agreement":null},{"id":"W153421366","doi":"10.1007/978-1-62703-128-8_17","title":"Colony Forming Cell Assays for Human Hematopoietic Progenitor Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Progenitor cell; Haematopoiesis; Stem cell; Biology; Enumeration; Cord blood; Bone marrow; Immunology; CD34; Cell culture; Blood cell; Myeloid; Colony-forming unit; Cell biology; Molecular biology; Genetics","score_opus":0.038206851085145474,"score_gpt":0.4134720081386649,"score_spread":0.3752651570535194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W153421366","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1021334,0.0005734849,0.8928611,0.000087166045,0.00041061174,0.0013259831,0.000008485118,0.000048782153,0.0025509377],"genre_scores_gemma":[0.16181347,0.000008875378,0.83718425,0.00026447358,0.00010681711,0.0003249937,0.000050859755,0.000045532535,0.00020076544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802,0.00049466686,0.00047020605,0.00030933466,0.000095830204,0.0006099845],"domain_scores_gemma":[0.9989502,0.00040954925,0.000115001036,0.00031189696,0.00005858105,0.00015481592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00186059,0.00020802404,0.0004796294,0.00018400775,0.00005976228,0.000006472766,0.00011803352,0.00031986853,0.00005432949],"category_scores_gemma":[0.00012040164,0.00019199577,0.0001589844,0.00018479135,0.000081920996,0.00003213294,0.000030576073,0.00019379158,0.000018378203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045480647,0.00018973727,0.007008459,0.00048993726,0.000027558826,0.000014321929,0.00051772187,0.0000013129685,0.9869108,0.0035546788,0.00002887956,0.0012111103],"study_design_scores_gemma":[0.0015213537,0.00029412104,0.00020623747,0.00005576863,0.00013193431,0.00008915408,0.0001337958,0.00007600603,0.99179995,0.0022589231,0.00323807,0.00019468505],"about_ca_topic_score_codex":0.0000123223645,"about_ca_topic_score_gemma":0.0000016832653,"teacher_disagreement_score":0.05968006,"about_ca_system_score_codex":0.000076303855,"about_ca_system_score_gemma":0.00004847063,"threshold_uncertainty_score":0.78293604},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W1540006","doi":"10.1007/978-1-61779-974-7_23","title":"Transient and Stable Expression of Antibodies in Nicotiana Species","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Nicotiana benthamiana; Nicotiana tabacum; Transgene; Biology; Genetically modified crops; Agrobacterium tumefaciens; Agrobacterium; Cell biology; Recombinant DNA; Agroinfiltration; Botany; Gene; Genetics","score_opus":0.024688549273189635,"score_gpt":0.36196118676180655,"score_spread":0.3372726374886169,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1540006","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7105962,0.0036508532,0.2848865,0.00005157179,0.000041563886,0.0001052287,0.000021271966,0.0000025609138,0.0006442219],"genre_scores_gemma":[0.77705824,0.00056989753,0.22221403,0.00005550001,0.000020496085,0.00001484373,0.000024987994,0.0000071765726,0.000034827055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906826,0.0002616055,0.00020823443,0.00019462741,0.000029154688,0.00023813963],"domain_scores_gemma":[0.9996901,0.000029510848,0.00004117679,0.00018902762,0.0000117456475,0.00003844979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000490734,0.00009614994,0.00019431295,0.00007148517,0.000014437661,0.0000023722787,0.000097199816,0.00013342593,0.0000106516],"category_scores_gemma":[0.000046891044,0.00008464984,0.00003508337,0.00008594074,0.00011706315,0.0000024823012,0.00004860535,0.00007292634,3.0603613e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002048684,0.00006744974,0.035608202,0.0000142358185,0.000006656147,4.4485338e-7,0.00009677112,0.000011600483,0.9613936,0.0010014543,0.00001953969,0.001759583],"study_design_scores_gemma":[0.0003163817,0.000044479817,0.047122322,0.0000120895675,0.000005263425,0.0000046042464,0.00007820856,0.00000726133,0.94119716,0.00029542437,0.01082095,0.000095879834],"about_ca_topic_score_codex":0.00002550367,"about_ca_topic_score_gemma":0.000029361012,"teacher_disagreement_score":0.066462,"about_ca_system_score_codex":0.0000044736685,"about_ca_system_score_gemma":0.000013106737,"threshold_uncertainty_score":0.34519202},"labels":[],"label_agreement":null},{"id":"W154499290","doi":"10.1007/978-1-61779-455-1_13","title":"Investigation of Membrane Protein Interactions Using the Split-Ubiquitin Membrane Yeast Two-Hybrid System","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Ubiquitin; Protein–protein interaction; Two-hybrid screening; Cell biology; Biology; Transcription factor; Membrane protein; Ubiquitin ligase; Proteases; Vesicle-associated membrane protein 8; Yeast; Biochemistry; Computational biology; Membrane; Gene; Enzyme","score_opus":0.060554912612878355,"score_gpt":0.35124513406867824,"score_spread":0.29069022145579987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W154499290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63018394,0.00027504624,0.36702555,0.000029015064,0.00018224078,0.0005360518,0.000025841782,0.00001640545,0.0017259093],"genre_scores_gemma":[0.69547427,0.0000062159097,0.30412897,0.00010417492,0.00007292209,0.00010299504,0.00004283665,0.000027473094,0.000040129726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968054,0.0018181425,0.000520134,0.00044504795,0.00008632407,0.00032490684],"domain_scores_gemma":[0.9989098,0.00003973612,0.00027131726,0.00059450266,0.00011332386,0.00007135231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016614244,0.00023122504,0.00031730087,0.00013468097,0.00007395323,0.000009900434,0.0003811102,0.00015696613,0.000054232398],"category_scores_gemma":[0.00023721445,0.0001877849,0.00014402028,0.00022665744,0.00030951246,0.0000056742406,0.00020218639,0.00024040096,0.0000040574905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083222396,0.000022032831,0.00047264824,0.00008786919,0.000056289282,0.000007811588,0.00021354928,0.000033524655,0.9931704,0.004345036,0.000001851317,0.0015057926],"study_design_scores_gemma":[0.0004160397,0.00014827191,0.00008783051,0.00008450502,0.000032400123,0.000101881786,0.00018524835,0.00051441515,0.99657196,0.0012237283,0.00043617058,0.00019757522],"about_ca_topic_score_codex":0.00035050523,"about_ca_topic_score_gemma":0.000026632046,"teacher_disagreement_score":0.06529034,"about_ca_system_score_codex":0.000030757896,"about_ca_system_score_gemma":0.0000972624,"threshold_uncertainty_score":0.7657646},"labels":[],"label_agreement":null},{"id":"W1546239575","doi":"10.1007/978-1-60327-492-0_8","title":"Energy Intake, Physical Activity, Energy Balance, and Cancer: Epidemiologic Evidence","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer Risks and Factors","field":"Medicine","cited_by":107,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Medicine; Cancer; Breast cancer; Prostate cancer; Internal medicine; Prostate; Oncology; Risk factor; Obesity; Colorectal cancer; Gynecology","score_opus":0.1541500523737572,"score_gpt":0.519512945053948,"score_spread":0.36536289268019073,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1546239575","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000547444,0.83982694,0.15920375,0.00009987314,0.00032137506,0.00023406181,0.00002301409,0.00003605174,0.00020018815],"genre_scores_gemma":[0.000049851213,0.9569106,0.04152994,0.0005158913,0.00033209077,0.0004233574,0.00003751161,0.00006235822,0.00013840919],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9943415,0.0033100082,0.00055478304,0.0011020902,0.0001125508,0.00057908415],"domain_scores_gemma":[0.9968457,0.001864072,0.00042731303,0.0006247144,0.000047389494,0.00019080208],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006096962,0.0006473795,0.0040394478,0.00036416794,0.00004740429,0.000007554676,0.00027424857,0.0008620307,0.000028182554],"category_scores_gemma":[0.00076124084,0.0004685112,0.00060674635,0.0005732605,0.00047955164,0.000031752515,0.0003095378,0.00076819985,0.0000015587889],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003441552,0.00007737145,0.0002650712,0.0010638228,0.00016827465,0.00014005705,0.000011488579,9.0356446e-7,0.00075475243,0.0014298573,0.00015653204,0.9958975],"study_design_scores_gemma":[0.00027260222,0.0003247965,0.00006606409,0.0040907133,0.0003767219,0.0003506296,0.00000149763,0.00014644078,0.00035560966,0.001263016,0.99228996,0.00046195247],"about_ca_topic_score_codex":0.0029479181,"about_ca_topic_score_gemma":0.000052887517,"teacher_disagreement_score":0.9954355,"about_ca_system_score_codex":0.00029671664,"about_ca_system_score_gemma":0.00043511743,"threshold_uncertainty_score":0.99977666},"labels":[],"label_agreement":null},{"id":"W154928529","doi":"10.1007/978-1-60327-287-2_7","title":"In Vitro Propagation of Two Tuberous Medicinal Plants: Holostemma ada-kodien and Ipomoea mauritiana","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Micropropagation; Medicinal plants; Biology; Mauritiana; Ipomoea; Botany; Tissue culture; In vitro","score_opus":0.014353269683800912,"score_gpt":0.35136580988629346,"score_spread":0.33701254020249255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W154928529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8502272,0.00832673,0.14001404,0.00065138214,0.00012317934,0.00028609208,0.000020232328,0.000006381574,0.00034477992],"genre_scores_gemma":[0.850075,0.0002851262,0.14851335,0.00063032046,0.000098557764,0.00001714341,0.00028019396,0.000010285022,0.00009000446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985278,0.0005558773,0.00030707556,0.00034524404,0.000055342483,0.00020865945],"domain_scores_gemma":[0.99963045,0.000022023843,0.000087260225,0.00018555312,0.000033228993,0.0000414638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005904013,0.00014483897,0.00026174105,0.00011837842,0.000019630073,0.0000045362426,0.00011668698,0.00023716033,0.0000034844031],"category_scores_gemma":[0.00014215785,0.00012315855,0.000034401663,0.000102390055,0.00010321036,0.000004532295,0.000037664304,0.0001191917,5.390321e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013360362,0.000044929835,0.00025217666,0.000010975162,0.000012379035,0.000040671654,0.00008742582,0.00003055127,0.96607536,0.0003454908,0.000027838187,0.032938607],"study_design_scores_gemma":[0.0008529529,0.0003896231,0.00041700844,0.000021163256,0.000010324856,0.00016833784,0.000029249926,0.00019560385,0.99517447,0.0012770104,0.0013234399,0.00014078975],"about_ca_topic_score_codex":0.00018061486,"about_ca_topic_score_gemma":0.00016163966,"teacher_disagreement_score":0.032797817,"about_ca_system_score_codex":0.000013959353,"about_ca_system_score_gemma":0.000042739604,"threshold_uncertainty_score":0.502226},"labels":[],"label_agreement":null},{"id":"W1552179486","doi":"10.1007/978-1-60327-461-6_17","title":"Quantification of Redox Conditions in the Nucleus","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Nucleus; Redox; Chemistry; Psychology; Neuroscience; Inorganic chemistry","score_opus":0.03663581142230653,"score_gpt":0.4116145614397963,"score_spread":0.37497875001748976,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1552179486","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7312243,0.00070168957,0.26587394,0.00021584926,0.00010278376,0.00021102813,0.000028189432,0.000003977869,0.001638223],"genre_scores_gemma":[0.8988103,0.00025439102,0.10030923,0.00029931287,0.000025897725,0.00005447659,0.00019569782,0.000008653867,0.000042021555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740547,0.0017436612,0.00031115464,0.0003048541,0.000040304538,0.00019456213],"domain_scores_gemma":[0.9993053,0.00010507007,0.0001071079,0.0004185909,0.000046534187,0.000017404253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008997253,0.0001143725,0.00018919964,0.00010422211,0.00004632775,0.0000018190536,0.00032607088,0.000255084,0.000012889186],"category_scores_gemma":[0.00045680554,0.00008755068,0.00007574428,0.00023464121,0.0005086184,0.0000018643715,0.00005936243,0.00015347502,0.0000025142147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036571626,0.00007733592,0.020236269,0.000004376382,0.00001550042,0.000010722037,0.00010497061,0.000049541606,0.9728378,0.0056644445,0.00007306989,0.0008894159],"study_design_scores_gemma":[0.00045252888,0.00023918989,0.05156982,0.000007583076,0.000006511936,0.0000554518,0.00014667102,0.000031990894,0.9372786,0.004006607,0.0060693845,0.00013565423],"about_ca_topic_score_codex":0.000040291037,"about_ca_topic_score_gemma":0.000031202035,"teacher_disagreement_score":0.16758598,"about_ca_system_score_codex":0.000006651425,"about_ca_system_score_gemma":0.00004059764,"threshold_uncertainty_score":0.35702133},"labels":[],"label_agreement":null},{"id":"W1553389184","doi":"10.1007/978-1-60761-925-3","title":"Photosynthesis Research Protocols","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Algal biology and biofuel production","field":"Energy","cited_by":94,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Consejo Superior de Investigaciones Científicas; University of Hyderabad; Australian National University; Turun Yliopisto; Arizona State University; Pennsylvania State University; Linköpings Universitet; Magyar Tudományos Akadémia","keywords":"Photosynthesis; Astrobiology; Planet; Sunlight; Environmental science; Biology; Botany; Physics; Astronomy","score_opus":0.10294012569501301,"score_gpt":0.4907306711579022,"score_spread":0.38779054546288916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1553389184","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000573628,0.0007629363,0.03997384,0.0005539592,0.0010053023,0.017792376,0.000026958658,0.00017417503,0.9396531],"genre_scores_gemma":[0.000011323515,0.000060515522,0.628965,0.0003555479,0.00089812145,0.021725848,0.00023528535,0.00012865037,0.34761968],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9914645,0.005794633,0.00059733004,0.0011984454,0.00017036371,0.00077475334],"domain_scores_gemma":[0.9974568,0.000867279,0.0002054799,0.001162871,0.0002237279,0.00008382807],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0077607795,0.0004244121,0.0007697693,0.0007029564,0.0001284612,0.000019835586,0.0008296014,0.0039008108,0.0010943634],"category_scores_gemma":[0.0024569337,0.00036336784,0.00021114398,0.00029657932,0.0010977093,0.000022686172,0.00036950465,0.0037235676,0.00030908646],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012972984,0.00006601857,0.000033119908,0.000085834086,0.000073611256,0.000055232085,0.000030245148,0.000001693153,0.7852259,0.085074745,0.0013602815,0.12786357],"study_design_scores_gemma":[0.00012516169,0.00015188231,0.0000051706197,0.000054154858,0.000008569552,0.000016058044,0.0000025650345,0.000003212254,0.2042124,0.24151385,0.55367565,0.00023130036],"about_ca_topic_score_codex":0.00016725101,"about_ca_topic_score_gemma":0.00016249025,"teacher_disagreement_score":0.5920334,"about_ca_system_score_codex":0.0001989057,"about_ca_system_score_gemma":0.00039798775,"threshold_uncertainty_score":0.9998818},"labels":[],"label_agreement":null},{"id":"W1553962779","doi":"10.1007/978-1-60327-214-8_1","title":"The Development of Germline Stem Cells in Drosophila","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":120,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Stem cell; Biology; Cell biology; Germline; Adult stem cell; Stem cell factor; Cell fate determination; Cellular differentiation; Genetics; Progenitor cell; Transcription factor; Gene","score_opus":0.05063912849039402,"score_gpt":0.3861274232861992,"score_spread":0.33548829479580516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1553962779","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000071169874,0.95117563,0.04656327,0.000011357259,0.0011625984,0.0008553193,0.00001610653,0.000019576,0.0001249444],"genre_scores_gemma":[0.000002618878,0.8744468,0.12468444,0.00002759782,0.000007924368,0.00023718673,0.000067466586,0.000058327747,0.00046765103],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98517317,0.011362028,0.0020426621,0.0006487807,0.000038571496,0.0007347732],"domain_scores_gemma":[0.99670035,0.001703928,0.0006933904,0.0008296956,0.00005452639,0.000018095381],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0033771843,0.0005763781,0.0024525283,0.00061692484,0.000120566656,0.0000052643363,0.0010695856,0.0015567815,0.000034405537],"category_scores_gemma":[0.00018736669,0.00039609137,0.00042158843,0.0006250257,0.0004895515,0.000012252668,0.00047330256,0.0011467924,0.00012385508],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003221116,0.00006774293,9.3805454e-7,0.00045150387,0.0001951065,0.000032213826,0.00014535835,6.256759e-7,0.2026879,0.0014409393,0.000013652063,0.7949318],"study_design_scores_gemma":[0.00039802073,0.00007443448,8.3578317e-7,0.0009594495,0.00004456497,0.00012807765,0.000023860044,0.0000011436942,0.20701362,0.00040957623,0.790619,0.00032741707],"about_ca_topic_score_codex":0.000014144848,"about_ca_topic_score_gemma":0.000020190704,"teacher_disagreement_score":0.79460436,"about_ca_system_score_codex":0.00019939234,"about_ca_system_score_gemma":0.0007950062,"threshold_uncertainty_score":0.9998491},"labels":[],"label_agreement":null},{"id":"W155475274","doi":"10.1007/978-1-61779-231-1_9","title":"Functional Analysis of Abscisic Acid 8′-Hydroxylase","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Abscisic acid; Chemistry; Biochemistry","score_opus":0.029928140239192602,"score_gpt":0.34460568921499507,"score_spread":0.31467754897580247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W155475274","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22507311,0.00038797667,0.77219903,0.000009526026,0.00012868225,0.000079312464,0.000016692062,0.0000063088173,0.0020993776],"genre_scores_gemma":[0.702202,0.000056258014,0.2973377,0.00020952454,0.000016218579,0.000030849333,0.000077881996,0.000013825264,0.00005570316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860424,0.0003283541,0.00032458073,0.00042564239,0.00006416271,0.00025301182],"domain_scores_gemma":[0.99927944,0.000021788055,0.0001276167,0.00043908294,0.00007047571,0.000061570674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007718186,0.0001563433,0.00033956012,0.0003064933,0.00002075929,0.0000024714755,0.00024990208,0.0002360402,0.0002638679],"category_scores_gemma":[0.00024360299,0.00014534572,0.0002266961,0.0005409612,0.0001276026,0.0000017315098,0.00014494105,0.00009068282,0.0000028799561],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008393887,0.00009366504,0.0005734942,0.0000071205927,0.0003643648,0.0000051451275,0.00004083225,0.000034017325,0.99158823,0.0032114068,0.000004287239,0.0039935163],"study_design_scores_gemma":[0.00026378283,0.0002297431,0.0006721445,0.00000331874,0.00020086064,0.00000671571,0.000029337074,0.00021382095,0.9909726,0.0066374554,0.0006162935,0.00015394711],"about_ca_topic_score_codex":0.000042209424,"about_ca_topic_score_gemma":0.000022949549,"teacher_disagreement_score":0.47712892,"about_ca_system_score_codex":0.000008748297,"about_ca_system_score_gemma":0.00005488867,"threshold_uncertainty_score":0.5927026},"labels":[],"label_agreement":null},{"id":"W1555479734","doi":"10.1007/978-1-59745-522-0_20","title":"Restriction Digestion and Real-Time PCR (qAMP)","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"","keywords":"DNA methylation; Sodium bisulfite; Bisulfite sequencing; Restriction enzyme; DNA; Methylation; genomic DNA; Restriction digest; Bisulfite; Molecular biology; Digestion (alchemy); Biology; Computational biology; Chemistry; Biochemistry; Gene; Chromatography; Gene expression","score_opus":0.020673250786692274,"score_gpt":0.3547896025350493,"score_spread":0.334116351748357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1555479734","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6442308,0.0013141851,0.35271162,0.000063711705,0.000098656536,0.00012571791,0.000003273599,0.000012974638,0.0014390575],"genre_scores_gemma":[0.30460283,0.009015128,0.6854917,0.00011220564,0.00014215324,0.000044152144,0.00020276879,0.00003905302,0.00035002487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982704,0.00074929144,0.0002565119,0.00043535023,0.00005511093,0.00023336215],"domain_scores_gemma":[0.99946046,0.000052518957,0.000083594874,0.00028805368,0.0000515334,0.00006383385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065746286,0.00015234624,0.00018442667,0.00012261716,0.00007403106,0.000006908366,0.000095601936,0.00032188836,0.000008563682],"category_scores_gemma":[0.0003780698,0.00015378941,0.00005220352,0.00016033214,0.00014320313,0.0000025980708,0.00009510896,0.000102063896,0.0000043046307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031292697,0.000025798929,0.015228702,0.0000037906723,0.000011800785,0.000007944173,0.000022634238,0.000051936004,0.9764774,0.00047317302,0.000015801197,0.0076497346],"study_design_scores_gemma":[0.0005086947,0.00042898217,0.031539187,0.000006420352,0.000012000034,0.000025974085,0.000008592724,0.00021371964,0.95483303,0.0051018912,0.007065528,0.00025598102],"about_ca_topic_score_codex":0.000090709305,"about_ca_topic_score_gemma":0.000006789334,"teacher_disagreement_score":0.33962798,"about_ca_system_score_codex":0.000016904842,"about_ca_system_score_gemma":0.00003774645,"threshold_uncertainty_score":0.62713504},"labels":[],"label_agreement":null},{"id":"W1558727349","doi":"10.1007/978-1-59745-385-1_1","title":"On Framing the Research Question and Choosing the Appropriate Research Design","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Memorial University of Newfoundland","funders":"","keywords":"Clinical study design; Randomized controlled trial; Framing (construction); Psychological intervention; Internal validity; Research design; Medicine; Relevance (law); Clinical trial; Psychology; Management science; Computer science; Medical physics; Statistics; Surgery; Mathematics; Pathology; Political science; Engineering; Nursing","score_opus":0.9446112429223799,"score_gpt":0.7534072237441117,"score_spread":0.19120401917826813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1558727349","genre_codex":"review","genre_gemma":"review","domain_codex":"methods","domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000030593721,0.5415185,0.45560572,0.00022704019,0.00012943975,0.0017485848,0.0000013545695,0.000001919987,0.000764392],"genre_scores_gemma":[0.0000026896316,0.71027744,0.2885588,0.00007325712,0.000076931305,0.00042733122,0.0000033989254,0.00002613822,0.00055400224],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.33817044,0.6486941,0.0065140855,0.0019831706,0.003839208,0.0007990176],"domain_scores_gemma":[0.8123897,0.1769748,0.0024781004,0.0067001646,0.0013370531,0.000120206096],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.7077676,0.0004785998,0.0055864146,0.0017457146,0.0008322638,0.0007170872,0.0043461253,0.00066435133,0.00018426352],"category_scores_gemma":[0.30062458,0.00015471602,0.0013391307,0.005369955,0.0011235297,0.000034320634,0.00088581856,0.0031793935,0.00038819076],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029156147,0.000014581443,0.0000033146225,0.0002402486,0.0001001842,0.000015777588,0.00017343236,0.0000131763,0.000044252058,0.016938426,0.0009060026,0.9815477],"study_design_scores_gemma":[0.00004381849,0.000088856,0.0000047404424,0.0011147703,0.00009640011,0.00007456836,0.0001102941,0.00081095245,0.00001313998,0.1413537,0.8561302,0.00015858335],"about_ca_topic_score_codex":0.000048551257,"about_ca_topic_score_gemma":0.0000048412044,"teacher_disagreement_score":0.9813891,"about_ca_system_score_codex":0.00013122072,"about_ca_system_score_gemma":0.00032671852,"threshold_uncertainty_score":0.9991203},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":["metaresearch"],"domain":"methods","study_design":"theoretical_or_conceptual","genre":"review","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"split"},{"id":"W156209010","doi":"10.1007/978-1-62703-532-3_11","title":"Functional Analysis of Small Rab GTPases in Cytokinesis in Arabidopsis thaliana","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Rab; Cytokinesis; Cell plate; GTPase; Cell biology; Biology; Mitosis; Arabidopsis thaliana; Ras superfamily; Plant cell; Cell division; Cell; Biochemistry; Mutant; GTP'; Gene","score_opus":0.020017198514124646,"score_gpt":0.32361455943974526,"score_spread":0.3035973609256206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W156209010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7372516,0.000719589,0.26140746,0.000092451286,0.00006823999,0.00019468734,0.0000130428625,0.0000036151737,0.00024931674],"genre_scores_gemma":[0.6731059,0.00043924153,0.32495844,0.0005826106,0.000035112877,0.00021334781,0.00043466402,0.00003341302,0.00019726835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976515,0.0008567523,0.0005611618,0.00053114776,0.00005527147,0.0003441557],"domain_scores_gemma":[0.99922335,0.00009046283,0.00013073994,0.00043650198,0.00007322085,0.00004569347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007546454,0.00020655424,0.0005239655,0.0007748122,0.000012142468,0.000007096519,0.00024614777,0.0003683653,0.00010279358],"category_scores_gemma":[0.00036455688,0.00020291409,0.00022221808,0.0010584011,0.00012022272,0.0000032074893,0.00014220735,0.00015426554,0.000002937448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034616925,0.000120974844,0.16129956,0.0000114475915,0.00017236713,0.0000058257883,0.000019263503,0.0017573013,0.8314746,0.00032106956,0.000014867781,0.004768094],"study_design_scores_gemma":[0.0011082911,0.00017740748,0.26372248,0.000021097047,0.00015834972,0.0000065402537,0.00009281451,0.0030310173,0.7289885,0.0013027989,0.0009666387,0.0004240632],"about_ca_topic_score_codex":0.0018212523,"about_ca_topic_score_gemma":0.0026680399,"teacher_disagreement_score":0.1024861,"about_ca_system_score_codex":0.000034346216,"about_ca_system_score_gemma":0.000054294127,"threshold_uncertainty_score":0.82745963},"labels":[],"label_agreement":null},{"id":"W1562628413","doi":"10.1007/978-1-61779-154-3_7","title":"Microarray-Based Identification of Transcription Factor Target Genes","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Center for Research Resources; National Institutes of Health; National Science Foundation","keywords":"Microarray analysis techniques; Microarray; Gene; Transcription factor; Computational biology; Biology; Identification (biology); Genetics; DNA microarray; Transcription (linguistics); Gene expression","score_opus":0.0744226236220463,"score_gpt":0.35926933289187885,"score_spread":0.2848467092698326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1562628413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7648701,0.0006227892,0.23377225,0.00011487516,0.00011480243,0.00023459112,0.00008666067,0.000024242538,0.00015967689],"genre_scores_gemma":[0.7125774,0.000033512777,0.2870286,0.00011907007,0.000016399827,0.000037444486,0.00016396225,0.0000018414545,0.000021726462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972945,0.0015685037,0.00039277668,0.00037310203,0.00007309001,0.00029804622],"domain_scores_gemma":[0.99949735,0.0001421243,0.00012735139,0.00011151851,0.00007206334,0.00004955948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010294835,0.00013611992,0.00025097502,0.000067759625,0.00003613404,0.000005435736,0.00037782214,0.00027129045,0.00029040474],"category_scores_gemma":[0.00016635517,0.00006362184,0.00011906088,0.000349594,0.00019202344,0.000022780387,0.00003695241,0.0001462814,0.0000099326035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052544252,0.00008350759,0.015888333,0.0000072564553,0.000012680186,0.0000062320846,0.00004072178,0.0000020327702,0.95450854,0.00033851582,0.0000019347256,0.029057724],"study_design_scores_gemma":[0.0001262934,0.00019277945,0.038521115,0.000004976226,0.000005133716,0.0000038681287,0.000021799051,0.00010711893,0.95748514,0.0027338013,0.00067741936,0.000120566394],"about_ca_topic_score_codex":0.00015988544,"about_ca_topic_score_gemma":0.000054081353,"teacher_disagreement_score":0.05325637,"about_ca_system_score_codex":0.000016488797,"about_ca_system_score_gemma":0.000015201151,"threshold_uncertainty_score":0.3179728},"labels":[],"label_agreement":null},{"id":"W156513061","doi":"10.1007/978-1-59745-540-4_14","title":"Analysis of Membrane Protein Complexes Using the Split-Ubiquitin Membrane Yeast Two-Hybrid System","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":57,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Interactome; Vesicle-associated membrane protein 8; Two-hybrid screening; Membrane protein; Cell biology; Biology; Protein–protein interaction; Ubiquitin; Transcription factor; Biochemistry; Chemistry; Yeast; Membrane; Gene","score_opus":0.031745674699256855,"score_gpt":0.39680356187157145,"score_spread":0.3650578871723146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W156513061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69485235,0.0009722237,0.3029132,0.00010246298,0.000055384226,0.00040231904,0.00005481207,0.000009828238,0.00063746725],"genre_scores_gemma":[0.83923095,0.000023319131,0.16032745,0.00013813161,0.00006494276,0.000025112231,0.00010619843,0.000019225436,0.00006463694],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965382,0.0017048784,0.0005312751,0.00056335726,0.00018116404,0.00048109042],"domain_scores_gemma":[0.99876845,0.000052237003,0.0001763842,0.00076814217,0.00015054384,0.00008425015],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018325319,0.000249993,0.00056916237,0.00032533336,0.00007590051,0.000019483196,0.0005888696,0.00017163319,0.000032427146],"category_scores_gemma":[0.00020728602,0.00019044985,0.00029814526,0.0008301074,0.00026969257,0.000002113276,0.00021006128,0.00021858828,0.0000015551929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115866795,0.00006308519,0.00035699207,0.00004191731,0.0003364008,0.000014419852,0.000025501,0.004042813,0.989978,0.001839668,0.0000020272976,0.0031832992],"study_design_scores_gemma":[0.0004358708,0.00024744467,0.00031938063,0.000025953108,0.00016951287,0.000025282456,0.00008081584,0.009759271,0.9880906,0.00020508196,0.00043640682,0.00020443203],"about_ca_topic_score_codex":0.0001497305,"about_ca_topic_score_gemma":0.000030247953,"teacher_disagreement_score":0.14437866,"about_ca_system_score_codex":0.000031058236,"about_ca_system_score_gemma":0.000085913984,"threshold_uncertainty_score":0.77663195},"labels":[],"label_agreement":null},{"id":"W156687860","doi":"10.1007/978-1-4939-1396-1_26","title":"Effect of Galectins on Viral Transmission","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Galectins and Cancer Biology","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Galectin; Infectivity; Virology; Virus; Viral envelope; Biology; Viral entry; Viral replication; Transmission (telecommunications); Galectin-1; Galectin-3; Immunology","score_opus":0.007879354773691508,"score_gpt":0.36504984110378275,"score_spread":0.35717048633009124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W156687860","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4432403,0.0013446473,0.5477815,0.0001280536,0.0007844481,0.00026948887,0.0000044429107,0.000041233998,0.006405866],"genre_scores_gemma":[0.95623934,0.00003623147,0.042985026,0.00037701448,0.000023309232,0.000051298648,0.000033862954,0.000023664665,0.00023027528],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9928426,0.0060112774,0.00034003696,0.00041014253,0.000016546079,0.00037939768],"domain_scores_gemma":[0.9986818,0.0008469035,0.00011271433,0.0003158132,0.00002345461,0.000019328754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021097104,0.00021208085,0.00055647653,0.00021689611,0.00004467068,0.0000018198098,0.0002437673,0.00071958627,0.0002109224],"category_scores_gemma":[0.00040746832,0.00015911365,0.00015432568,0.00018237517,0.00025424248,0.000008615907,0.0000452353,0.000546842,0.000028573477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037025163,0.00004376516,0.0017637035,0.000020499305,0.0000273913,0.0000012697793,0.000036567228,0.000010328986,0.7636351,0.003483703,0.000021996826,0.23058541],"study_design_scores_gemma":[0.0015806543,0.0051434627,0.0007146864,0.000019069887,0.00002345864,0.000020660267,0.0000035255105,0.000018295676,0.96250963,0.0019737743,0.027844299,0.00014850145],"about_ca_topic_score_codex":0.00006368831,"about_ca_topic_score_gemma":0.000004229609,"teacher_disagreement_score":0.512999,"about_ca_system_score_codex":0.000025602978,"about_ca_system_score_gemma":0.000020227202,"threshold_uncertainty_score":0.6488466},"labels":[],"label_agreement":null},{"id":"W157143858","doi":"10.1007/978-1-61779-501-5_34","title":"Multigene Phylogenetic Analyses to Delimit New Species in Fungal Plant Pathogens","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Phylogenetic tree; Phylogenetics; DNA barcoding; Evolutionary biology; Taxonomy (biology); Identification (biology); Gene; Genetics; Zoology; Ecology","score_opus":0.0856160718528083,"score_gpt":0.37614566646780784,"score_spread":0.29052959461499955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W157143858","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6425282,0.003200586,0.35204715,0.000023519913,0.00019476256,0.0003380201,0.00038173096,0.000015451222,0.0012706133],"genre_scores_gemma":[0.35011432,0.0003683391,0.64785755,0.00095074606,0.00012184543,0.000062326944,0.00027857133,0.000042571777,0.00020370948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729705,0.00079363864,0.00046587695,0.0007634333,0.00008451108,0.0005954728],"domain_scores_gemma":[0.99905604,0.00004536323,0.000083492545,0.00052572734,0.000042953878,0.0002464316],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00050912367,0.00032318215,0.00042044974,0.00032998016,0.00003365913,0.000010513373,0.00040465122,0.00030915646,0.000080724414],"category_scores_gemma":[0.0004605524,0.0003049048,0.00017163629,0.00036349075,0.0000851414,0.0000024040992,0.00025064894,0.00014666264,0.000016612177],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020293795,0.00012501006,0.04160149,0.000007630273,0.000050299368,0.00019515802,0.00009213075,0.00016658331,0.9517078,0.00017193593,0.000079917016,0.005599151],"study_design_scores_gemma":[0.00058198645,0.00045840637,0.20127998,0.000018856546,0.000037061745,0.000032433516,0.000076228636,0.00008483642,0.7923971,0.0004917189,0.004083243,0.00045814062],"about_ca_topic_score_codex":0.00020911774,"about_ca_topic_score_gemma":0.0003952482,"teacher_disagreement_score":0.29581043,"about_ca_system_score_codex":0.000024743125,"about_ca_system_score_gemma":0.00010701356,"threshold_uncertainty_score":0.9999403},"labels":[],"label_agreement":null},{"id":"W1576498690","doi":"10.1007/978-1-60761-823-2_4","title":"Metagenomic Analysis of Isotopically Enriched DNA","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Metagenomics; Stable-isotope probing; Computational biology; Genome; DNA; Biology; Gene; DNA sequencing; Nucleic acid; Biochemistry; Genetics; Microorganism; Bacteria","score_opus":0.012616485305991345,"score_gpt":0.35804829535991767,"score_spread":0.3454318100539263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1576498690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8157352,0.000016606678,0.18103239,0.00007669186,0.00012041369,0.0000805487,0.000003285731,0.0000071928025,0.0029276214],"genre_scores_gemma":[0.56331444,0.0000050254816,0.43621114,0.00038897837,0.000004294898,0.000008118016,0.000020392848,0.000004481572,0.000043167467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976476,0.0016092231,0.00027291282,0.00023646886,0.000024356383,0.00020948112],"domain_scores_gemma":[0.99904007,0.00035210792,0.00009746109,0.0004690869,0.0000063242715,0.00003494462],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001201238,0.000100353645,0.00039971303,0.0001578895,0.000033297794,0.0000017081298,0.00044803423,0.00025672908,0.0067049717],"category_scores_gemma":[0.0002945946,0.00009198603,0.00014256345,0.0006130076,0.00043738066,0.000013675957,0.00032073015,0.0003740801,0.000027321592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012526011,0.00005730901,0.031137811,0.0000011798862,0.0001333448,0.0000020368761,0.00009026052,0.00017317368,0.96168125,0.0037683514,0.00001044733,0.0029322929],"study_design_scores_gemma":[0.00051850535,0.00024711067,0.45847526,8.6638516e-7,0.000510621,0.0000057221205,0.000029267145,0.0013318489,0.4698026,0.055656396,0.013034102,0.00038771945],"about_ca_topic_score_codex":0.0003332109,"about_ca_topic_score_gemma":0.0020331356,"teacher_disagreement_score":0.49187866,"about_ca_system_score_codex":0.000017104067,"about_ca_system_score_gemma":0.000008450488,"threshold_uncertainty_score":0.99420303},"labels":[],"label_agreement":null},{"id":"W1580908187","doi":"10.1007/978-1-60761-962-8_4","title":"Functional Assays for Human Embryonic Stem Cell Pluripotency","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Embryoid body; Embryonic stem cell; Cell biology; Induced pluripotent stem cell; Ectoderm; Biology; Endoderm; KOSR; Mesoderm; Germ layer; Stem cell; Alkaline phosphatase; Cellular differentiation; Embryo; Embryogenesis; Genetics; Biochemistry","score_opus":0.028459547120001098,"score_gpt":0.3746467700825932,"score_spread":0.3461872229625921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1580908187","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23788117,0.0005709758,0.7573916,0.00019635473,0.0006426827,0.0005726964,0.000029000294,0.000021359281,0.0026941907],"genre_scores_gemma":[0.25283504,0.00006536513,0.7372781,0.00052581035,0.0004888354,0.00056775083,0.0005845837,0.0001240584,0.0075304494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99724257,0.000738854,0.0003750282,0.0008385048,0.00013087352,0.00067414314],"domain_scores_gemma":[0.99876416,0.000113713664,0.000117324664,0.00071814115,0.00015217903,0.00013451203],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020856652,0.00027684806,0.00031097478,0.00020240019,0.0001297729,0.000022746408,0.00051015365,0.0006183084,0.00007439602],"category_scores_gemma":[0.00018323156,0.0002724244,0.00023501707,0.00018482187,0.00021606873,0.0000033934475,0.00029345555,0.0004849441,0.000018063409],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006331617,0.00010519986,0.0010406887,0.00003536147,0.000034318058,0.00000728397,0.0000075338894,0.00003862855,0.98924273,0.0030170782,0.00041425278,0.005993626],"study_design_scores_gemma":[0.0011073463,0.00040618313,0.00055457826,0.000003985734,0.0000142119925,0.000022241038,0.000016062295,0.00014609395,0.9412944,0.0040198145,0.052103497,0.00031163916],"about_ca_topic_score_codex":0.000018342489,"about_ca_topic_score_gemma":0.000055492714,"teacher_disagreement_score":0.051689245,"about_ca_system_score_codex":0.000022827544,"about_ca_system_score_gemma":0.00014319038,"threshold_uncertainty_score":0.9999728},"labels":[],"label_agreement":null},{"id":"W1586834401","doi":"10.1007/978-1-4939-1743-3_12","title":"Analysis and Application of Viroid-Specific Small RNAs Generated by Viroid-Inducing RNA Silencing","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Viroid; RNA; Biology; RNA silencing; Potato spindle tuber viroid; Gene silencing; Trans-acting siRNA; Virology; Computational biology; RNA interference; Genetics; Gene","score_opus":0.03677736222711489,"score_gpt":0.3394804524187889,"score_spread":0.30270309019167396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1586834401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6434379,0.0009013342,0.35530704,0.00010573751,0.000013411254,0.00010219497,0.00003187901,0.000012598081,0.00008788438],"genre_scores_gemma":[0.85856456,0.0006390542,0.14038807,0.00014719646,0.000044946806,0.00004688802,0.00014870269,0.0000018839551,0.000018702047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99761754,0.0013110882,0.00028823686,0.00042908257,0.00008021453,0.00027385444],"domain_scores_gemma":[0.9990134,0.0006634251,0.00012024437,0.000096670905,0.000049636965,0.000056575056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016559758,0.00013356232,0.00037642,0.000078309684,0.0000859182,0.0000140238435,0.00021521725,0.00013938209,0.000013888044],"category_scores_gemma":[0.0003137678,0.00006138958,0.00007183027,0.0008729232,0.00014090491,0.000018116694,0.0001464636,0.00014630436,0.0000015075569],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008552625,0.000018207977,0.0017571561,0.00000293092,0.00004964667,6.870211e-7,0.00002279557,0.000031309526,0.8236744,0.00015028736,0.0000073436545,0.17427671],"study_design_scores_gemma":[0.0000905154,0.00011007063,0.009015371,0.0000037953546,0.00002684513,0.0000010600226,0.000043490574,0.0037494125,0.9846679,0.0007077943,0.0014536817,0.0001300722],"about_ca_topic_score_codex":0.0008509168,"about_ca_topic_score_gemma":0.00032785395,"teacher_disagreement_score":0.21512665,"about_ca_system_score_codex":0.00002159769,"about_ca_system_score_gemma":0.0000028453762,"threshold_uncertainty_score":0.25033948},"labels":[],"label_agreement":null},{"id":"W1588730418","doi":"10.1007/978-1-59745-494-0_13","title":"Characterizing Transgene Inheritance","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Monsanto (Canada)","funders":"","keywords":"Inheritance (genetic algorithm); Transgene; Biology; Genetics; Statistic; Phenotype; Gene; Statistics; Mathematics","score_opus":0.02154430992547309,"score_gpt":0.37059642957042643,"score_spread":0.34905211964495336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1588730418","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27658394,0.0023471105,0.7189348,0.0005606862,0.00021245414,0.00019571223,0.0000025247211,0.000013387049,0.0011494168],"genre_scores_gemma":[0.47406718,0.00044008286,0.52373886,0.0012479746,0.00019721001,0.00002462323,0.000043305758,0.000019369249,0.00022139262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998551,0.0003378543,0.00024755372,0.00052941416,0.000042500047,0.00029168098],"domain_scores_gemma":[0.99948776,0.0000059937815,0.000060769584,0.0003585585,0.000037684258,0.00004926355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055954873,0.00016038785,0.00018934053,0.00006781412,0.00003534616,0.000009108406,0.00018042463,0.00023527919,0.000010328586],"category_scores_gemma":[0.000094691524,0.00015535338,0.000087864784,0.00015207875,0.00007001906,0.0000016310945,0.0000347602,0.00012649219,0.0000030801557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045061053,0.00004274675,0.00042079954,0.0000030231704,0.000010645492,0.000004884349,0.000023711158,0.000024445146,0.9357018,0.0007009474,0.000010098581,0.06301184],"study_design_scores_gemma":[0.00026429328,0.0004961314,0.0046226745,0.0000056996323,0.0000061410187,0.000023815848,0.000013551506,0.000034490764,0.9475035,0.0019873204,0.044838894,0.00020349302],"about_ca_topic_score_codex":0.0000034354534,"about_ca_topic_score_gemma":0.0000025660213,"teacher_disagreement_score":0.19748324,"about_ca_system_score_codex":0.000010393337,"about_ca_system_score_gemma":0.00002584608,"threshold_uncertainty_score":0.6335127},"labels":[],"label_agreement":null},{"id":"W159048632","doi":"10.1007/978-1-61779-921-1_2","title":"Synthetic Antibody Libraries","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Complementarity (molecular biology); Computational biology; Complementarity determining region; Antibody; Binding affinities; Antigen; Affinities; Synthetic biology; Biology; Computer science; Biochemistry; Genetics; Monoclonal antibody","score_opus":0.04824309338448786,"score_gpt":0.47478039701005204,"score_spread":0.4265373036255642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W159048632","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30483848,0.0139336195,0.6392167,0.003211336,0.0005315666,0.00041302442,0.000008453587,0.00006716362,0.037779637],"genre_scores_gemma":[0.08988237,0.00018372152,0.90716827,0.0012018421,0.00016162611,0.000023439381,0.000040433144,0.00002308166,0.0013152461],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982193,0.00073666894,0.00021485506,0.00021091277,0.00009183855,0.0005263958],"domain_scores_gemma":[0.99923337,0.00029172158,0.00002989068,0.0002584392,0.000026081201,0.00016051439],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009959316,0.0001316784,0.000326906,0.0001838104,0.000034306526,0.0000070807855,0.00011997617,0.00015449985,0.0004349024],"category_scores_gemma":[0.00049543707,0.00009828991,0.00009799008,0.00023661023,0.00025037266,0.00003805343,0.000141725,0.0002840829,0.00006525237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010765531,0.00012821537,0.1245108,0.000045623747,0.00004112065,0.000049917424,0.000099208475,3.8565645e-7,0.8016279,0.046360556,0.000052037987,0.026976608],"study_design_scores_gemma":[0.0008089551,0.00045522198,0.05363565,0.00007231535,0.0000501388,0.00038452187,0.00008332693,0.00017838701,0.70358914,0.0156119745,0.22479461,0.0003357463],"about_ca_topic_score_codex":0.000046630073,"about_ca_topic_score_gemma":5.3173534e-7,"teacher_disagreement_score":0.26795152,"about_ca_system_score_codex":0.000017996072,"about_ca_system_score_gemma":0.00004568818,"threshold_uncertainty_score":0.47618765},"labels":[],"label_agreement":null},{"id":"W159079147","doi":"10.1385/1-59259-802-1:301","title":"Comparison of Methods Based on Diversity and Similarity for Molecule Selection and the Analysis of Drug Discovery Data","year":2004,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Mitacs","keywords":"Cluster analysis; Similarity (geometry); Chemical space; Set (abstract data type); Data mining; Computer science; Selection (genetic algorithm); Data set; Consensus clustering; Drug discovery; Artificial intelligence; Bioinformatics; Fuzzy clustering; Biology; CURE data clustering algorithm","score_opus":0.07923237722257018,"score_gpt":0.4689759517498672,"score_spread":0.389743574527297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W159079147","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07714444,0.00030449,0.9216829,0.00044834637,0.000069488095,0.00028658594,0.000033952332,0.000009926864,0.0000198635],"genre_scores_gemma":[0.28344265,0.0000073654437,0.7163701,0.00014564261,0.0000032551704,0.000007884588,0.000018584082,0.0000037208217,7.6303735e-7],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99449545,0.004228171,0.00040697624,0.00058432476,0.000118022544,0.00016707358],"domain_scores_gemma":[0.99437356,0.0045701116,0.0002680729,0.0006697549,0.00008587177,0.000032658176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007356655,0.00014596515,0.0006536844,0.0004175647,0.00014030292,0.000022668803,0.0008019578,0.000086016466,5.887597e-7],"category_scores_gemma":[0.00155282,0.00011414983,0.000122052385,0.0011345779,0.00032137448,0.0001323495,0.0017119216,0.00015852775,1.4659775e-8],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051714847,0.0004094698,0.02632442,0.000110170906,0.00076444616,0.0000013984725,0.0017023663,0.6053668,0.041418467,0.2744502,0.0000039523175,0.048931103],"study_design_scores_gemma":[0.0011496346,0.000095683135,0.010018865,0.000010161197,0.00024832506,6.654331e-7,0.00003142166,0.87465346,0.055798665,0.05787234,0.00001332782,0.00010745491],"about_ca_topic_score_codex":0.00031470673,"about_ca_topic_score_gemma":0.000056534464,"teacher_disagreement_score":0.26928663,"about_ca_system_score_codex":0.000034473116,"about_ca_system_score_gemma":0.00006869384,"threshold_uncertainty_score":0.4654895},"labels":[],"label_agreement":null},{"id":"W1591957551","doi":"10.1007/978-1-61779-034-8_6","title":"Polyamine Block of Inwardly Rectifying Potassium Channels","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Heart, Lung, and Blood Institute","keywords":"Polyamine; Potassium channel; Inward-rectifier potassium ion channel; Ion channel; Chemistry; Blockade; Potassium; Biophysics; Function (biology); Endogeny; Biochemistry; Cell biology; Biology; Receptor","score_opus":0.045802436944705226,"score_gpt":0.35901439447538436,"score_spread":0.31321195753067915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1591957551","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17119993,0.0006484289,0.8218496,0.000068880414,0.0013188978,0.00020723241,0.0000059363642,0.00001761115,0.004683503],"genre_scores_gemma":[0.6385724,0.00005669705,0.3605388,0.00024259117,0.00015607795,0.00003051933,0.000050786883,0.000027346834,0.0003248034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983777,0.0005972512,0.00034780763,0.0003688595,0.000055395198,0.00025297818],"domain_scores_gemma":[0.99938196,0.000021519403,0.00013839372,0.00032304338,0.00008233917,0.000052764917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008041122,0.00015961417,0.00023693261,0.00018750328,0.000027133035,0.0000032313674,0.00016966413,0.0003244497,0.000049781505],"category_scores_gemma":[0.00031310826,0.00015401884,0.00011007262,0.00022838831,0.00012291517,0.0000020596924,0.00011571956,0.00011577922,0.0000030538465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010656456,0.000065892935,0.0018506448,0.000012156263,0.00003423174,0.0000031984407,0.000110488865,0.000064188505,0.9889156,0.0010280067,0.00004257952,0.007766399],"study_design_scores_gemma":[0.00046290204,0.0003848959,0.00082196627,0.000009468567,0.00001111101,0.000022935057,0.000070717724,0.00024113913,0.9906053,0.001439362,0.0057556354,0.00017456815],"about_ca_topic_score_codex":0.00005216683,"about_ca_topic_score_gemma":0.0000052182163,"teacher_disagreement_score":0.46737245,"about_ca_system_score_codex":0.000012772409,"about_ca_system_score_gemma":0.0000353176,"threshold_uncertainty_score":0.6280706},"labels":[],"label_agreement":null},{"id":"W1602584517","doi":"10.1007/978-1-60327-136-3_1","title":"Expressed Sequence Tags: An Overview","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":115,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Expressed sequence tag; Biology; Computational biology; Profiling (computer programming); Sequence (biology); cDNA library; DNA sequencing; Genome; Sequence analysis; Complementary DNA; Genetics; Gene; Bioinformatics; Computer science","score_opus":0.14440498638064359,"score_gpt":0.4880965416950171,"score_spread":0.3436915553143735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1602584517","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000042455158,0.96278113,0.03572736,0.00001582952,0.00028577328,0.00060678594,0.000086329856,0.000008822422,0.00044553168],"genre_scores_gemma":[0.000002130732,0.71689475,0.28210038,0.00029801615,0.00014374805,0.00014703922,0.00029472535,0.000059810416,0.000059431924],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9944582,0.0028237952,0.0007914918,0.0012418692,0.000078955716,0.0006056797],"domain_scores_gemma":[0.9981309,0.00007900173,0.00032962873,0.0012648101,0.00006759318,0.00012806425],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012067461,0.00069134135,0.0017302124,0.00019789684,0.000060609156,0.000025308585,0.0009107163,0.0010219101,0.000014539441],"category_scores_gemma":[0.00029306303,0.0006119727,0.00051820127,0.00028502507,0.000185069,8.034328e-7,0.0003862325,0.00037390695,0.000007808375],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000060336943,0.000055386314,0.000004543514,0.0006335825,0.000118655786,0.000019502877,0.000012305607,0.0000051020274,0.15142202,0.00078948936,0.000030606447,0.8469028],"study_design_scores_gemma":[0.00018953493,0.0004148171,0.0000034467785,0.00053181796,0.00017056012,0.00004515217,0.000007054518,0.000003876665,0.0038947575,0.0032225142,0.9908461,0.00067038817],"about_ca_topic_score_codex":0.000024163166,"about_ca_topic_score_gemma":0.000013854013,"teacher_disagreement_score":0.99081546,"about_ca_system_score_codex":0.000042423813,"about_ca_system_score_gemma":0.00024316159,"threshold_uncertainty_score":0.99963313},"labels":[],"label_agreement":null},{"id":"W1604626957","doi":"10.1007/978-1-59745-385-1_7","title":"Evaluation of Diagnostic Tests","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Health Sciences Centre","funders":"","keywords":"Diagnostic test; Diagnostic accuracy; Receiver operating characteristic; Medicine; Positive predicative value; Medical physics; Intensive care medicine; Predictive value; Pediatrics; Radiology; Internal medicine","score_opus":0.885596937434767,"score_gpt":0.7190666183910455,"score_spread":0.1665303190437215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1604626957","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000027973783,0.6614127,0.3350398,0.000008241571,0.00027024234,0.0012156282,0.000010705289,0.0000013917175,0.0020384947],"genre_scores_gemma":[0.0000011513723,0.6548401,0.34473062,0.000021499334,0.000023725937,0.00023538558,0.000020344543,0.000015315685,0.00011188396],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.49342707,0.47367972,0.023976179,0.002349289,0.0060933693,0.00047439034],"domain_scores_gemma":[0.9041209,0.07616754,0.011476025,0.00580657,0.0023317751,0.00009715376],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.4098487,0.00052625505,0.013801088,0.0013364335,0.000030670988,0.000051066912,0.0024602397,0.0005797762,0.0025954896],"category_scores_gemma":[0.65528375,0.00025242873,0.0042449413,0.0028081702,0.00016811216,0.00002648954,0.00026573357,0.0003516078,0.00053457636],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[1.569264e-7,0.00002865714,0.000057350713,0.00042573063,0.00023075711,0.0000071995205,0.00001959881,0.000014708364,0.000016570286,0.0005971849,0.00042246594,0.9981796],"study_design_scores_gemma":[0.000090983674,0.00003706489,0.000022665145,0.0009274249,0.0022488034,0.000056928962,0.000006790109,0.0003749595,0.000010491175,0.023724968,0.97227174,0.00022715496],"about_ca_topic_score_codex":0.00000885503,"about_ca_topic_score_gemma":0.0000068055015,"teacher_disagreement_score":0.99795246,"about_ca_system_score_codex":0.000100865465,"about_ca_system_score_gemma":0.00054506573,"threshold_uncertainty_score":0.9999928},"labels":[],"label_agreement":null},{"id":"W1605312341","doi":"10.1007/978-1-60327-136-3_10","title":"Obtaining Accurate Translations from Expressed Sequence Tags","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Annotation; Pipeline (software); Genome; Expressed sequence tag; Sequence (biology); Computational biology; Computer science; Gene Annotation; Software; DNA sequencing; Biology; Natural language processing; Artificial intelligence; Gene; Genetics; Programming language","score_opus":0.0493182161671289,"score_gpt":0.40073444476827963,"score_spread":0.35141622860115074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1605312341","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37360513,0.0027474996,0.6218409,0.0004154399,0.00013558776,0.0001525738,0.000043587792,0.0000071125455,0.0010521641],"genre_scores_gemma":[0.5161442,0.0002144964,0.4827396,0.00071133417,0.000062585816,0.00002100702,0.00007102527,0.0000118118305,0.000023898867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982947,0.00051613315,0.00029951317,0.0005181883,0.000044647677,0.00032679734],"domain_scores_gemma":[0.99934757,0.00006579378,0.000079164296,0.00040514022,0.000045873086,0.000056435158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042022875,0.00020049547,0.00025129982,0.000066462584,0.00006345459,0.00001407356,0.0002814883,0.0002273795,0.000013112684],"category_scores_gemma":[0.00019754485,0.00019937614,0.00010077143,0.00013528447,0.00009617549,8.624967e-7,0.00006582051,0.00012884743,0.0000025109841],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027469134,0.000024957011,0.0009967961,0.0000012846969,0.000034809076,0.000006099127,0.0001235954,0.00035448564,0.9702241,0.0007698439,0.000015502252,0.0274211],"study_design_scores_gemma":[0.00064385316,0.00028539437,0.004398556,0.000009303676,0.000022589638,0.0000046143145,0.000073437455,0.00036482347,0.94491917,0.033273697,0.015651207,0.0003533564],"about_ca_topic_score_codex":0.00004472988,"about_ca_topic_score_gemma":0.000016278591,"teacher_disagreement_score":0.1425391,"about_ca_system_score_codex":0.000010753907,"about_ca_system_score_gemma":0.000048057515,"threshold_uncertainty_score":0.81303227},"labels":[],"label_agreement":null},{"id":"W16138469","doi":"10.1007/978-1-60761-863-8_4","title":"The Concept of Multiple-Target Anti-miRNA Antisense Oligonucleotide Technology","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Oligonucleotide; microRNA; Computational biology; Computer science; Biology; Genetics; Gene","score_opus":0.008078938705581802,"score_gpt":0.33511878825092983,"score_spread":0.32703984954534804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W16138469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78815,0.0016846008,0.20888615,0.00030043427,0.00044655384,0.00030212637,0.000021454845,0.000020085618,0.00018857472],"genre_scores_gemma":[0.63811845,0.000054969158,0.36158475,0.00007913172,0.000051189145,0.000023890101,0.000035297824,0.00002625412,0.000026076017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997963,0.00062296656,0.00046316776,0.00047530778,0.00006923269,0.0004063174],"domain_scores_gemma":[0.99855775,0.00013853848,0.00022698872,0.00087809755,0.00013759836,0.000061028884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009306186,0.00021391294,0.0003019048,0.00015454274,0.00008143971,0.000009838344,0.00050565234,0.0005175881,0.000016976577],"category_scores_gemma":[0.0018320166,0.00017496431,0.00013922057,0.00030243516,0.00091276533,0.000002390709,0.00027465168,0.0003083275,0.0000030344015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003676248,0.000046500118,0.012962328,0.0000060357897,0.000049660932,0.000007470216,0.000012305304,0.00007859093,0.9742532,0.0042276457,0.000046573838,0.008272946],"study_design_scores_gemma":[0.00055413024,0.00009992948,0.0038046194,0.0000063668167,0.000012849095,0.00003313666,0.000028295457,0.00026391385,0.9704316,0.0033667057,0.02121088,0.0001875513],"about_ca_topic_score_codex":0.000018037072,"about_ca_topic_score_gemma":0.00003119754,"teacher_disagreement_score":0.15269862,"about_ca_system_score_codex":0.000009456321,"about_ca_system_score_gemma":0.000083616695,"threshold_uncertainty_score":0.71348375},"labels":[],"label_agreement":null},{"id":"W161606654","doi":"10.1007/978-1-60761-938-3_23","title":"Blood-Brain Barrier Disruption in the Treatment of Brain Tumors","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":62,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Evans Blue; Blood–brain barrier; Medicine; Central nervous system; Albumin; Pharmacology; Pathology; Neuroscience; Internal medicine; Psychology","score_opus":0.020541234420096928,"score_gpt":0.40591890809952497,"score_spread":0.38537767367942805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W161606654","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9912995,0.00045935297,0.003935368,0.0030992858,0.0001361007,0.00053428765,0.0000070428428,0.000008999546,0.0005200438],"genre_scores_gemma":[0.7983176,0.00004877444,0.20039408,0.0008695722,0.000048213675,0.00024446368,0.000034399927,0.000015012753,0.000027870696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982815,0.00088484545,0.000290426,0.00025900546,0.00006725914,0.00021698809],"domain_scores_gemma":[0.9988153,0.00064296555,0.00006636861,0.00040450486,0.00002605598,0.000044799275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009395707,0.00014622885,0.00035908713,0.00019892222,0.000016369051,0.0000037943598,0.0000887165,0.00014944165,0.000050408667],"category_scores_gemma":[0.0006838019,0.00008678773,0.00012718406,0.00025998944,0.00012975244,0.000008627552,0.000015195755,0.00014233835,0.000002305904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003932119,0.0011980134,0.108197026,0.000008393101,0.00005290437,0.0002699814,0.0008829924,0.0000029376263,0.8554003,0.0053040977,0.000012255435,0.02863174],"study_design_scores_gemma":[0.005836738,0.003012595,0.13160706,0.000036868605,0.00015315942,0.0001417717,0.00030101294,0.000085607484,0.84077144,0.0072462833,0.010628146,0.00017931695],"about_ca_topic_score_codex":0.00019616676,"about_ca_topic_score_gemma":0.00015294991,"teacher_disagreement_score":0.19645871,"about_ca_system_score_codex":0.00002824235,"about_ca_system_score_gemma":0.000033011278,"threshold_uncertainty_score":0.3539101},"labels":[],"label_agreement":null},{"id":"W1619777364","doi":"10.1007/978-1-59745-480-3_6","title":"Periodic Assembly of Nanospecies on Repetitive DNA Sequences Generated on Gold Nanoparticles by Rolling Circle Amplification","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Rolling circle replication; DNA; Colloidal gold; Nanotechnology; Complementary sequences; Molecule; Nanoparticle; Nanometre; Scaffold; Chemistry; Materials science; Biophysics; Biology; Biochemistry; Engineering; DNA polymerase; Biomedical engineering","score_opus":0.04142311301635742,"score_gpt":0.4063659579638189,"score_spread":0.3649428449474615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1619777364","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008612994,0.95357174,0.036675353,0.00002910881,0.00012385176,0.00053871714,0.00013049005,0.000045974506,0.00027176487],"genre_scores_gemma":[0.0023865458,0.8994935,0.09706446,0.0001329095,0.000061250634,0.00007533808,0.00064756454,0.00005055843,0.00008788168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99557763,0.0019931635,0.00086066435,0.0010508347,0.00014075884,0.00037696646],"domain_scores_gemma":[0.9982594,0.00014920782,0.0006518927,0.0007430635,0.00013481505,0.000061615654],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006697645,0.0004883525,0.0013059364,0.0002764859,0.00007199693,0.000016749731,0.00038213772,0.0008338009,0.0000014980695],"category_scores_gemma":[0.00059018243,0.00041713167,0.00046069504,0.0004951496,0.00042372683,0.0000026954444,0.00009551561,0.00031178351,0.000002563124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020494705,0.00007435818,0.000003387924,0.000112173686,0.00009868555,0.000007807144,0.0000065075706,0.0000056625713,0.703952,0.00008324645,0.00006164794,0.29557404],"study_design_scores_gemma":[0.000103873834,0.0005521329,0.0000019879,0.0005963392,0.00007658687,0.000022628756,0.000011925144,0.000006387995,0.7802209,0.00008432911,0.21796669,0.00035622282],"about_ca_topic_score_codex":0.000014315741,"about_ca_topic_score_gemma":0.0000054045163,"teacher_disagreement_score":0.2952178,"about_ca_system_score_codex":0.00007532702,"about_ca_system_score_gemma":0.00013450914,"threshold_uncertainty_score":0.99982804},"labels":[],"label_agreement":null},{"id":"W1620972314","doi":"10.1007/978-1-59745-471-1_15","title":"Aggregation Chimeras: Combining ES Cells, Diploid, and Tetraploid Embryos","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute","keywords":"Chimera (genetics); Biology; Ploidy; Embryo; Embryonic stem cell; Computational biology; Cell biology; Genetics; Gene","score_opus":0.016774658866980877,"score_gpt":0.3624221381295662,"score_spread":0.3456474792625853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1620972314","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6197926,0.0049231625,0.37316126,0.00031253864,0.00017156615,0.00037682976,0.0000074297495,0.00002730095,0.00122733],"genre_scores_gemma":[0.5987345,0.0009782993,0.39902994,0.0007746038,0.0000773838,0.000032316526,0.00009604968,0.000034265075,0.00024262724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99739754,0.0010549672,0.00032442424,0.00064419466,0.00010382308,0.0004750284],"domain_scores_gemma":[0.99926805,0.00006701067,0.000087802066,0.000412797,0.000054913195,0.00010945127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010598756,0.00023641424,0.00028949758,0.00019299105,0.00007393825,0.000027022465,0.0002791609,0.00034275826,0.000010442061],"category_scores_gemma":[0.00029763504,0.00023138018,0.00008179683,0.00022314888,0.00016508834,0.0000045719103,0.00016289433,0.0002597012,0.0000053766144],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005075645,0.0000673641,0.0009417692,0.000011383955,0.00002686379,0.00001527641,0.000030084544,0.00003791025,0.9646072,0.0006611714,0.000029539047,0.03352072],"study_design_scores_gemma":[0.00075910205,0.00059295143,0.0015826959,0.000018192433,0.000010780721,0.00002755432,0.00003407279,0.0002808304,0.9894737,0.0027284222,0.004219186,0.0002724855],"about_ca_topic_score_codex":0.000015115607,"about_ca_topic_score_gemma":0.0000063511493,"teacher_disagreement_score":0.03324824,"about_ca_system_score_codex":0.000019061452,"about_ca_system_score_gemma":0.00004373121,"threshold_uncertainty_score":0.943541},"labels":[],"label_agreement":null},{"id":"W162180145","doi":"10.1007/978-1-62703-432-6_10","title":"Fabrication of a Human Recombinant Collagen-Based Corneal Substitute Using Carbodiimide Chemistry","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrospun Nanofibers in Biomedical Applications","field":"Materials Science","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Carbodiimide; Recombinant DNA; Chemistry; Antigenicity; Cornea; Tissue engineering; Scaffold; Biophysics; Biomedical engineering; Biochemistry; Immunology; Biology; Antibody; Engineering","score_opus":0.02691900125657955,"score_gpt":0.37962464899944687,"score_spread":0.35270564774286733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W162180145","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46801934,0.000082339924,0.5312738,0.000080193466,0.000098861965,0.0002375139,0.000003376335,0.000021369155,0.00018321515],"genre_scores_gemma":[0.21146722,0.000002990962,0.78821194,0.000105270316,0.000016886193,0.00014021533,0.000023378572,0.000012926506,0.000019146271],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981841,0.00052179623,0.00048149852,0.00039365664,0.00009794191,0.00032099595],"domain_scores_gemma":[0.99888086,0.00020785157,0.0002409192,0.0004594303,0.00014110532,0.00006981486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009853925,0.0001394509,0.0003116575,0.00008811304,0.000062315485,0.000012290124,0.00038623734,0.00021937252,0.0002638699],"category_scores_gemma":[0.00023799004,0.00013232561,0.000059122565,0.00046445656,0.00044668454,0.00002297388,0.00007618416,0.000088760855,0.000009852303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004574637,0.00007112957,0.0005036346,0.00002676595,0.0000042930906,0.0000015623006,0.000016206393,0.000024359397,0.9975435,0.0009792164,0.000015605856,0.0008091643],"study_design_scores_gemma":[0.000285851,0.000047787435,0.00043483663,0.000017540218,0.000013048572,0.00000379882,0.0000066611583,0.001787457,0.9850644,0.012118244,0.000086325344,0.00013406604],"about_ca_topic_score_codex":0.00052188005,"about_ca_topic_score_gemma":0.00000449262,"teacher_disagreement_score":0.25693816,"about_ca_system_score_codex":0.0001277897,"about_ca_system_score_gemma":0.00011682687,"threshold_uncertainty_score":0.5396082},"labels":[],"label_agreement":null},{"id":"W162320534","doi":"10.1007/978-1-60761-938-3_1","title":"Morphology and Properties of Brain Endothelial Cells","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Caveolae; Vascular permeability; Cell biology; Endothelial stem cell; Endothelium; Permeability (electromagnetism); Tight junction; Matrix metalloproteinase; Vascular endothelial growth factor B; Blood–brain barrier; Biology; Chemistry; Neuroscience; Pathology; Medicine; Vascular endothelial growth factor; Cancer research; Vascular endothelial growth factor A; Signal transduction; Biochemistry; In vitro; Central nervous system; VEGF receptors; Endocrinology; Membrane","score_opus":0.08685228973588029,"score_gpt":0.41147468741527604,"score_spread":0.32462239767939577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W162320534","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005619196,0.9533914,0.044504266,0.00004045576,0.0011549111,0.00040330776,0.000046919165,0.000017756942,0.0003848076],"genre_scores_gemma":[0.000007449351,0.8937636,0.10557556,0.0003768358,0.00005413076,0.00007574566,0.0000016391252,0.00002876869,0.00011623791],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99563503,0.0028987257,0.00052729563,0.000613976,0.000053886313,0.0002711053],"domain_scores_gemma":[0.99864066,0.0006738665,0.0002722266,0.00035345877,0.000021118918,0.000038691753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069257343,0.00031029695,0.0014905309,0.00027883012,0.000041644125,0.00000722746,0.00028486917,0.0006184244,0.000020504998],"category_scores_gemma":[0.0017062214,0.00021210687,0.00018487178,0.00024547067,0.0008543255,0.000012713582,0.000279313,0.0006563089,0.000003725815],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000042935535,0.0000058277915,8.9185005e-7,0.00053118856,0.000009337356,0.000010120467,0.000031467112,3.150549e-8,0.5613368,0.0013013593,0.0000069123216,0.43676177],"study_design_scores_gemma":[0.00010550648,0.000065487366,1.7203199e-7,0.0001629384,0.000054306016,0.000101153746,0.0000038865437,6.076274e-7,0.28383672,0.0010368064,0.7144792,0.00015319377],"about_ca_topic_score_codex":0.000012744372,"about_ca_topic_score_gemma":0.0000024006222,"teacher_disagreement_score":0.7144723,"about_ca_system_score_codex":0.000010017026,"about_ca_system_score_gemma":0.00007026717,"threshold_uncertainty_score":0.86494666},"labels":[],"label_agreement":null},{"id":"W162930727","doi":"10.1007/978-1-61779-204-5_15","title":"Use of Zebrafish and Knockdown Technology to Define Proprotein Convertase Activity","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University Health Centre; Royal Victoria Regional Health Centre","funders":"","keywords":"Zebrafish; Gene knockdown; Morpholino; Danio; Biology; In situ hybridization; Microinjection; Cell biology; Proprotein convertase; RNA interference; Model organism; Messenger RNA; Gene; Molecular biology; Genetics; RNA; Endocrinology","score_opus":0.052820790654964145,"score_gpt":0.3998810717938508,"score_spread":0.34706028113888665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W162930727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8437632,0.00042398527,0.15488112,0.00010454553,0.00004359294,0.0005544599,0.000017110331,0.00001228709,0.00019973444],"genre_scores_gemma":[0.59770787,0.000025909556,0.401947,0.00011271111,0.00000867415,0.00009387276,0.000007815727,0.000020842028,0.00007528352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802756,0.0007159049,0.0002456621,0.00055745564,0.000063950196,0.0003894528],"domain_scores_gemma":[0.99908835,0.00005591056,0.00005984032,0.00056948746,0.00011618759,0.000110238594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006410183,0.00018639374,0.00032660377,0.0003449759,0.000026800462,0.000006328503,0.0002193556,0.00039195427,0.00003142476],"category_scores_gemma":[0.0013755363,0.00017833056,0.00006219741,0.0003424273,0.0003423581,0.000004146309,0.00058127154,0.00021014169,0.000004360903],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022860026,0.00008990864,0.01077227,0.000025214425,0.00003836541,0.000020352089,0.00003391138,8.019565e-7,0.92301947,0.0004413061,0.0000105872205,0.0653192],"study_design_scores_gemma":[0.00033448997,0.0010672858,0.0027833616,0.00001090786,0.000009132209,0.000035992955,0.000010726442,0.000027631408,0.9913644,0.0012302765,0.0029405407,0.00018523463],"about_ca_topic_score_codex":0.00025696587,"about_ca_topic_score_gemma":0.00013143766,"teacher_disagreement_score":0.24706587,"about_ca_system_score_codex":0.000013533975,"about_ca_system_score_gemma":0.00007017692,"threshold_uncertainty_score":0.72721094},"labels":[],"label_agreement":null},{"id":"W1629379067","doi":"10.1007/978-1-60761-439-5_12","title":"Plasmid-Mediated Bioaugmentation of Wastewater Microbial Communities in a Laboratory-Scale Bioreactor","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Bioaugmentation; Plasmid; Bioreactor; Xenobiotic; Biodegradation; Microbiology; Wastewater; Biology; Microbial population biology; Degradation (telecommunications); Bacteria; Microorganism; Catabolism; Biotechnology; Gene; Environmental engineering; Genetics; Environmental science; Ecology; Biochemistry; Engineering; Botany","score_opus":0.012634796554051891,"score_gpt":0.31586798888324813,"score_spread":0.3032331923291962,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1629379067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99489707,0.000027419199,0.0041713417,0.0002846866,0.000106625645,0.00018522122,0.000046689198,0.000012745067,0.00026819058],"genre_scores_gemma":[0.8295289,0.00003185252,0.16950762,0.00076995813,0.000006215668,0.0000038435383,0.00013404123,0.0000073057067,0.000010214582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818027,0.00093929213,0.00037427392,0.00018282894,0.000063553925,0.00025978213],"domain_scores_gemma":[0.9996102,0.00007126999,0.00008325409,0.00018749684,0.000009728482,0.000038075694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008469135,0.00012841403,0.00022414952,0.0001420244,0.000017679838,0.000006114702,0.00020450368,0.00017532939,0.0006087671],"category_scores_gemma":[0.00005498178,0.000102084814,0.000036289555,0.00033081448,0.00023585767,0.00004525318,0.00007847552,0.00014026905,0.000038932943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003834364,0.00010522352,0.027601503,0.0000030214155,0.0000026812068,0.0000037905922,0.00072884304,0.000021120759,0.9699877,0.000013705692,0.000033546632,0.0014605253],"study_design_scores_gemma":[0.0006121482,0.00011589242,0.010759733,0.0000091291395,0.0000030284662,0.00000137086,0.00017335394,0.00007367058,0.98667663,0.00021286368,0.0012347176,0.0001274318],"about_ca_topic_score_codex":0.00032728727,"about_ca_topic_score_gemma":0.0005175078,"teacher_disagreement_score":0.16536812,"about_ca_system_score_codex":0.00008775202,"about_ca_system_score_gemma":0.000010315097,"threshold_uncertainty_score":0.66655725},"labels":[],"label_agreement":null},{"id":"W163297960","doi":"10.1007/978-1-59745-536-7_22","title":"Isolation of Oligodendroglial Cells from Cultured Neural Stem/Progenitors","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Emergent BioSolutions (Canada)","funders":"","keywords":"Progenitor cell; Neural stem cell; Stem cell; Biology; Cell biology; Myelin; Progenitor; Phenotype; Oligodendrocyte; Neuroscience; Central nervous system; Genetics","score_opus":0.04158928789378489,"score_gpt":0.36992877102769023,"score_spread":0.3283394831339053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W163297960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5175661,0.000037784925,0.48134738,0.000010884024,0.0007994686,0.0001318418,0.00001517886,0.000022542028,0.000068841],"genre_scores_gemma":[0.6956905,0.000013695689,0.3037682,0.0004047071,0.000066588975,0.00000705216,0.0000028573565,0.00002729017,0.000019125935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690574,0.0014965405,0.000504143,0.00057559897,0.00014213925,0.00037582812],"domain_scores_gemma":[0.9986179,0.0007805187,0.00019691432,0.00029579972,0.000031172098,0.000077732475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006303606,0.00019781767,0.00033193245,0.000186842,0.000043841963,0.000010614112,0.00032906662,0.00019326391,0.00002413137],"category_scores_gemma":[0.00036284234,0.00018070542,0.00012198192,0.00039288515,0.00011564952,0.000037470218,0.00012584642,0.0002071138,0.0000076253864],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008384595,0.000062534345,0.00031829,0.000004631246,0.000003849899,0.00007834033,0.00006651756,0.000070112794,0.9935624,0.0019629349,0.0000015123969,0.0037850493],"study_design_scores_gemma":[0.00036835577,0.00018382976,0.00013812022,0.0000044106464,0.000013932621,0.000013731438,0.000018294813,0.0012162367,0.9967617,0.0009781785,0.00015133678,0.00015189848],"about_ca_topic_score_codex":0.000031680796,"about_ca_topic_score_gemma":0.000007620651,"teacher_disagreement_score":0.17812441,"about_ca_system_score_codex":0.000019280116,"about_ca_system_score_gemma":0.000016583735,"threshold_uncertainty_score":0.7368953},"labels":[],"label_agreement":null},{"id":"W164039747","doi":"10.1007/978-1-61779-204-5_6","title":"In Vitro Assay for Protease Activity of Proprotein Convertase Subtilisin Kexins (PCSKs): An Overall Review of Existing and New Methodologies","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"Canadian Institutes of Health Research","keywords":"Subtilisin; Proprotein convertase; Protease; Kexin; Proprotein Convertases; Biochemistry; Cleave; Furin; Enzyme; In vitro; Biology; Proteolysis; Chemistry","score_opus":0.20743861693647553,"score_gpt":0.4807604061353495,"score_spread":0.27332178919887395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W164039747","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000084485466,0.69155854,0.30490485,0.000014760556,0.000097134645,0.0031607354,0.00012593204,0.000006575237,0.00004701174],"genre_scores_gemma":[0.0000051632974,0.52628165,0.47281215,0.000089135174,0.000045687113,0.00053362065,0.00015667173,0.000042802523,0.000033107717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99001443,0.00707526,0.0012927505,0.0010509287,0.00008950713,0.00047709554],"domain_scores_gemma":[0.99738276,0.00030190346,0.001151735,0.00090001797,0.00013012296,0.00013344362],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.006954164,0.0005983719,0.0026664003,0.00028371724,0.000023813678,0.0000062520335,0.00050586305,0.001029427,0.000012320461],"category_scores_gemma":[0.005951938,0.00051083317,0.00048402444,0.00020834428,0.00023359478,0.000012171316,0.0003732771,0.0004213931,2.670067e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017444773,0.00008215787,9.584513e-7,0.02444481,0.000065324246,0.000006066311,0.00001118189,6.720198e-8,0.55192083,0.00048376797,0.000011175708,0.4227992],"study_design_scores_gemma":[0.00056239124,0.00086323725,3.3862318e-7,0.0083814105,0.00021569675,0.000024250669,0.000003543849,0.000007260984,0.8610797,0.005091652,0.12331946,0.00045107724],"about_ca_topic_score_codex":0.0003724897,"about_ca_topic_score_gemma":0.0000131330835,"teacher_disagreement_score":0.4223481,"about_ca_system_score_codex":0.000038843318,"about_ca_system_score_gemma":0.00059096294,"threshold_uncertainty_score":0.99973434},"labels":[],"label_agreement":null},{"id":"W164844240","doi":"10.1007/978-1-59745-519-0_40","title":"Atomic Force Microscopy to Study Interacting Forces in Phospholipid Bilayers Containing General Anesthetics","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Force Microscopy Techniques and Applications","field":"Physics and Astronomy","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Atomic force microscopy; Phospholipid; Force spectroscopy; Lipid bilayer; Resolution (logic); Materials science; Nanotechnology; Chemistry; Biophysics; Membrane; Chemical physics; Computer science; Biochemistry","score_opus":0.04741681615031291,"score_gpt":0.508435882761029,"score_spread":0.4610190666107161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W164844240","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008949714,0.25481832,0.73308665,0.000009125224,0.00018902868,0.0023851213,0.000026669291,0.000036209356,0.00049914455],"genre_scores_gemma":[0.0008829326,0.053591847,0.94385296,0.00013821584,0.000105813495,0.0010626101,0.00016182305,0.0001252992,0.00007849184],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963813,0.00090745173,0.0011331085,0.00084669876,0.00006126577,0.0006701677],"domain_scores_gemma":[0.9985089,0.00034685363,0.00040640938,0.0006080871,0.000037624457,0.000092175025],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017806531,0.00055440015,0.0016332519,0.00054812257,0.00007270815,0.000048222013,0.00065245637,0.00028816774,0.000058101275],"category_scores_gemma":[0.00003520249,0.0005164766,0.0003400355,0.00078250654,0.00007612782,0.000025028277,0.0003298829,0.0008013284,0.000008599861],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016117468,0.00020394569,0.0015158904,0.00018029178,0.00008971646,0.000015776772,0.0004484232,0.000019404177,0.010909092,0.0044899634,0.0000075755675,0.9821038],"study_design_scores_gemma":[0.00085620437,0.0006930675,0.000014619127,0.0026004289,0.00029004007,0.000025584202,0.0007641493,0.00013810424,0.030554125,0.0044356566,0.9580545,0.0015735455],"about_ca_topic_score_codex":0.0006194539,"about_ca_topic_score_gemma":0.000013539472,"teacher_disagreement_score":0.98053026,"about_ca_system_score_codex":0.00016853631,"about_ca_system_score_gemma":0.000100910685,"threshold_uncertainty_score":0.9997287},"labels":[],"label_agreement":null},{"id":"W1648934465","doi":"10.1007/978-1-60327-567-5_7","title":"Label-Free Detection with the Liquid Core Optical Ring Resonator Sensing Platform","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photonic and Optical Devices","field":"Engineering","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BioPhage Pharma (Canada)","funders":"National Institute of Biomedical Imaging and Bioengineering","keywords":"Resonator; Analyte; Microfluidics; Materials science; Refractive index; Optoelectronics; Core (optical fiber); Fluorescence; Detection limit; Nanotechnology; Optical sensing; Optics; Chemistry; Chromatography; Physics","score_opus":0.021588728363407958,"score_gpt":0.3252352196237457,"score_spread":0.3036464912603377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1648934465","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26354292,0.0004344851,0.7316773,0.00012533275,0.00008843778,0.00009950219,7.451955e-7,0.000090165435,0.0039410824],"genre_scores_gemma":[0.45422083,0.000017480774,0.545395,0.0003145647,0.000027034323,0.000004079453,0.0000012462821,0.000014806134,0.000004968916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992045,0.000094094,0.00015526198,0.00018234688,0.00006058172,0.0003032218],"domain_scores_gemma":[0.99941987,0.00020369419,0.000018386916,0.00029166223,0.000018961093,0.000047405487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005599044,0.00013772596,0.00018701512,0.00006360942,0.000044337263,0.000012691314,0.0001831841,0.0001636613,0.000004111483],"category_scores_gemma":[0.00015971153,0.00009210741,0.000031861815,0.00021464817,0.00008437831,0.000027592067,0.000043140855,0.00035480649,0.0000026824307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006203925,0.0000080317495,0.0000049407026,0.000008297364,0.000021285625,0.00003360974,0.000062979125,0.00088952394,0.9176667,0.0104304645,0.0000020373864,0.07081011],"study_design_scores_gemma":[0.00060058106,0.0005104289,0.0002958071,0.00003187332,0.00002616736,0.00007895094,0.00006167987,0.13112575,0.85645527,0.008426533,0.002127254,0.00025970786],"about_ca_topic_score_codex":0.0000066159246,"about_ca_topic_score_gemma":0.000032974785,"teacher_disagreement_score":0.19067788,"about_ca_system_score_codex":0.00005116548,"about_ca_system_score_gemma":0.000009113006,"threshold_uncertainty_score":0.3756031},"labels":[],"label_agreement":null},{"id":"W165246168","doi":"10.1007/978-1-4939-0363-4_11","title":"Applications of Chitosan Nanoparticles in Drug Delivery","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanoparticle-Based Drug Delivery","field":"Materials Science","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières; Innovation and Economic Development Trois Rivières","funders":"","keywords":"Chitosan; Drug delivery; Nanoparticle; Nanotechnology; Drug; Materials science; Pharmacology; Medicine; Chemical engineering; Engineering","score_opus":0.0123138671473946,"score_gpt":0.33309461089435954,"score_spread":0.32078074374696497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W165246168","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71281856,0.0002413499,0.28624657,0.00009398898,0.00008020393,0.00018679611,0.0000041394565,0.000022698772,0.0003057098],"genre_scores_gemma":[0.6324127,0.000006082,0.36733902,0.00013289062,0.00001235429,0.00008370078,0.0000021469284,0.000009000631,0.0000021599549],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967805,0.0019119019,0.00048389516,0.000372116,0.0000820573,0.00036954478],"domain_scores_gemma":[0.9988734,0.00047187685,0.00012004637,0.00045444397,0.00002264586,0.00005759922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018221295,0.00012522987,0.00031235677,0.00021748328,0.000024247534,0.00000843553,0.00034854253,0.00009158292,0.000037463193],"category_scores_gemma":[0.00030252186,0.00012102512,0.00004985163,0.00045864563,0.00023447901,0.000041635296,0.00013627324,0.0001073768,0.000020477833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002142502,0.00010896927,0.0038780416,0.000014398241,0.0000021229262,0.0000027227936,0.000093142335,0.00022613099,0.9713792,0.0062164604,0.0000018507435,0.018055486],"study_design_scores_gemma":[0.00040675394,0.00004840638,0.0006069672,0.000012697918,0.0000064710907,0.0000020737375,0.000038740593,0.0006615618,0.9873509,0.0104232095,0.00031860982,0.00012365596],"about_ca_topic_score_codex":0.00032490867,"about_ca_topic_score_gemma":0.00007727186,"teacher_disagreement_score":0.081092454,"about_ca_system_score_codex":0.000019329515,"about_ca_system_score_gemma":0.000043563174,"threshold_uncertainty_score":0.4935261},"labels":[],"label_agreement":null},{"id":"W165444948","doi":"10.1007/978-1-60761-454-8_6","title":"Profiling LPS Glycoforms of Non-typeable Haemophilus influenzae by Multiple-Stage Tandem Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Haemophilus influenzae; Tandem mass spectrometry; Haemophilus; Chemistry; Mass spectrometry; Microbiology; Computational biology; Biology; Chromatography; Bacteria; Genetics; Antibiotics","score_opus":0.017612639457354303,"score_gpt":0.3458766888983598,"score_spread":0.3282640494410055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W165444948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56768215,0.0014624387,0.42909193,0.0000748783,0.0005098393,0.0002776003,0.000031523057,0.000040779832,0.0008288723],"genre_scores_gemma":[0.5789307,0.0000997977,0.4200872,0.0002506185,0.00003570252,0.00002383858,0.00014989822,0.000024351264,0.00039793953],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979156,0.00061954034,0.00055488455,0.00040293921,0.000014115952,0.0004928945],"domain_scores_gemma":[0.9991216,0.00019247235,0.0002101724,0.00038275303,0.00006731189,0.000025656169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091341976,0.00024541904,0.0005910558,0.00030871716,0.00007801521,0.0000085111615,0.00025898698,0.0005707435,0.00019078162],"category_scores_gemma":[0.00041469044,0.00020899337,0.00013491386,0.00045579468,0.00013445904,0.00005408293,0.00006922068,0.00039785713,0.000020554988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010885254,0.00012047347,0.015700486,0.000012157505,0.00007528169,0.0000032423914,0.00002877597,0.000023957198,0.97804624,0.0011653027,0.00005092424,0.004664321],"study_design_scores_gemma":[0.0014898083,0.00058851147,0.0031027545,0.000016625227,0.000021318117,0.000023176375,0.000044950495,0.0000466682,0.9862633,0.0022265231,0.005945166,0.00023119959],"about_ca_topic_score_codex":0.00014733706,"about_ca_topic_score_gemma":0.0000085549045,"teacher_disagreement_score":0.012597732,"about_ca_system_score_codex":0.00004914608,"about_ca_system_score_gemma":0.000041150543,"threshold_uncertainty_score":0.8522502},"labels":[],"label_agreement":null},{"id":"W166900241","doi":"10.1007/978-1-59745-429-2_13","title":"Macromolecular Delivery Across the Blood–Brain Barrier","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre; University of Toronto","funders":"National Institute of Biomedical Imaging and Bioengineering","keywords":"Microbubbles; Blood–brain barrier; Drug delivery; Central nervous system; Blood stream; Medicine; Neuroscience; Ultrasound; Biology; Nanotechnology; Materials science; Radiology; Internal medicine","score_opus":0.014954958364627355,"score_gpt":0.32795120194249255,"score_spread":0.3129962435778652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W166900241","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39707437,0.0012788854,0.60002196,0.00026200214,0.0001022999,0.00014820424,0.000013722597,0.00009715503,0.001001423],"genre_scores_gemma":[0.34261927,0.0003927345,0.65377307,0.0024859968,0.000086854285,0.00025915002,0.000028217992,0.000082183564,0.00027254375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998783,0.00037079104,0.00019287222,0.0002305193,0.000052183175,0.00037064517],"domain_scores_gemma":[0.99918324,0.0002862582,0.00002028325,0.00043726058,0.000021918602,0.000051023504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004969516,0.00016174735,0.00019426677,0.000046924728,0.00012642764,0.000010702469,0.00033009757,0.00016959397,0.00005130201],"category_scores_gemma":[0.00012776024,0.00012711319,0.000082243336,0.0002734173,0.00022689471,0.000014513668,0.000055976936,0.00027675612,0.000020234484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000017324049,0.000014913713,0.00056682125,0.0000043116947,0.000046532412,0.000040376384,0.00033994587,0.0006850815,0.99083984,0.0016358446,0.000069258625,0.005755322],"study_design_scores_gemma":[0.00063755986,0.00005771076,0.0011825119,0.000007969278,0.00003307054,0.00038580902,0.000103065984,0.0023225762,0.83061165,0.006107323,0.1580765,0.00047429698],"about_ca_topic_score_codex":0.000030176945,"about_ca_topic_score_gemma":0.00002252825,"teacher_disagreement_score":0.16022824,"about_ca_system_score_codex":0.000018615176,"about_ca_system_score_gemma":0.000016521912,"threshold_uncertainty_score":0.5183525},"labels":[],"label_agreement":null},{"id":"W1675201170","doi":"10.1007/978-1-60761-925-3_27","title":"Quantifying the Amount and Activity of Rubisco in Leaves","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"","keywords":"RuBisCO; Biosphere; Yield (engineering); Photosynthesis; Biological system; Environmental science; Computational biology; Biology; Chemistry; Botany; Ecology; Physics","score_opus":0.02611901828569794,"score_gpt":0.39106796143891465,"score_spread":0.3649489431532167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1675201170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77111566,0.00028025752,0.22802609,0.000118989825,0.00012388479,0.00012132238,0.0000032661196,0.000002455712,0.00020806839],"genre_scores_gemma":[0.900583,0.00012670936,0.099102646,0.00012091088,0.000017520306,0.000025008732,0.0000027618037,0.000010777403,0.000010662086],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890083,0.0003675159,0.000181137,0.00030074763,0.000037914902,0.00021184815],"domain_scores_gemma":[0.9994773,0.00007159346,0.00008084008,0.0003181218,0.000023865854,0.000028269977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012084101,0.00012032406,0.00019915722,0.00006696665,0.000024762701,0.000006188162,0.000211208,0.00021808626,0.0000056268623],"category_scores_gemma":[0.0004948867,0.00008849283,0.000045446643,0.00011407655,0.00021392055,0.000001914532,0.0001820588,0.000236457,2.4073185e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003515008,0.000035784702,0.0019483808,0.00001535629,0.000009023455,0.0000022756255,0.000044492168,0.000004402491,0.9812393,0.0034021265,4.6786e-7,0.013263249],"study_design_scores_gemma":[0.0002505627,0.00010835096,0.001406501,0.00000788412,0.0000054894363,0.000017934459,0.000045554556,0.00014412154,0.992196,0.0045320992,0.0011831218,0.00010238561],"about_ca_topic_score_codex":0.0001212128,"about_ca_topic_score_gemma":0.00040720307,"teacher_disagreement_score":0.12946734,"about_ca_system_score_codex":0.0000034773589,"about_ca_system_score_gemma":0.00004305039,"threshold_uncertainty_score":0.3608633},"labels":[],"label_agreement":null},{"id":"W1677611251","doi":"10.1007/978-1-60761-439-5_16","title":"Community-Level Physiological Profiling","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heart Rate Variability and Autonomic Control","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Profiling (computer programming); Computer science; Programming language","score_opus":0.10943859854162973,"score_gpt":0.45646073656631303,"score_spread":0.3470221380246833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1677611251","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34513935,0.00014704239,0.64991176,0.0026994946,0.000078840145,0.0003377451,0.0000032804621,0.00005284872,0.0016296101],"genre_scores_gemma":[0.33652282,0.000005433762,0.6599823,0.0033721959,0.000030948177,0.000012927211,0.000018237817,0.0000049862274,0.00005011752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963984,0.002767567,0.00029939748,0.00022032083,0.000032277294,0.00028206906],"domain_scores_gemma":[0.9992076,0.00025639668,0.00003694471,0.00039806502,0.000033260916,0.000067716814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024750137,0.00012461611,0.00043133987,0.000089771806,0.00005472338,0.000004688718,0.00012172035,0.00023493954,0.000044392935],"category_scores_gemma":[0.0012177265,0.00009928197,0.00010007482,0.00016579122,0.000105188534,0.0000124302815,0.00004947333,0.0007207822,0.000010287526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024989662,0.0001831311,0.00052827783,0.000008105749,0.000011638455,0.0000147733745,0.000057694848,0.000011441776,0.9232768,0.0065553305,0.0000042866623,0.069323525],"study_design_scores_gemma":[0.0029383914,0.0021048086,0.0783043,0.000056828372,0.000053066946,0.000067475085,0.0001609493,0.0036646496,0.78055644,0.122206144,0.009495068,0.00039190194],"about_ca_topic_score_codex":0.000030232002,"about_ca_topic_score_gemma":0.0000012285487,"teacher_disagreement_score":0.14272039,"about_ca_system_score_codex":0.00004998183,"about_ca_system_score_gemma":0.00007182292,"threshold_uncertainty_score":0.40486014},"labels":[],"label_agreement":null},{"id":"W168229136","doi":"10.1007/978-1-60761-869-0_18","title":"Immunoregulatory Properties of Heme Oxygenase-1","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heme Oxygenase-1 and Carbon Monoxide","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"Comisión Nacional de Investigación Científica y Tecnológica","keywords":"Heme oxygenase; Biliverdin; Proinflammatory cytokine; Heme; Immune system; Inducer; Oxygenase; Autoimmunity; Chemistry; Immunology; Gene isoform; Inflammation; Enzyme; Biology; Biochemistry; Gene","score_opus":0.01442565502808738,"score_gpt":0.3278147276243841,"score_spread":0.31338907259629667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W168229136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.937031,0.00215559,0.058814947,0.00007003268,0.00037405652,0.00021260341,0.0000075345774,0.000014946345,0.0013193242],"genre_scores_gemma":[0.7286378,0.000054465985,0.27057523,0.00029144305,0.00008861087,0.000056105044,0.000024244522,0.000038155475,0.00023394267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980733,0.0005436828,0.00044621347,0.00047646588,0.00007974796,0.0003806105],"domain_scores_gemma":[0.99892414,0.000017706414,0.000125227,0.00076241134,0.00009063352,0.00007987344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011107267,0.00023003474,0.0003361454,0.00013045978,0.000030195037,0.00000702062,0.00040635036,0.00044374593,0.000052745352],"category_scores_gemma":[0.00042866482,0.00020549337,0.00017327866,0.00016515433,0.00036231097,0.0000025601644,0.00020932355,0.0002824476,0.000005336532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060833652,0.00006621002,0.0013311468,0.0000223202,0.000045645724,0.0000052100295,0.000031827407,0.00000865312,0.99088055,0.0013912449,0.000038233196,0.0061180987],"study_design_scores_gemma":[0.00042893307,0.00015414148,0.000807882,0.000009989023,0.000010409214,0.000018617045,0.000039858904,0.000039086946,0.9832113,0.0006415638,0.014398562,0.00023966552],"about_ca_topic_score_codex":0.000049345912,"about_ca_topic_score_gemma":0.000050644227,"teacher_disagreement_score":0.21176028,"about_ca_system_score_codex":0.000008628841,"about_ca_system_score_gemma":0.000116792406,"threshold_uncertainty_score":0.83797765},"labels":[],"label_agreement":null},{"id":"W168626391","doi":"10.1007/978-1-60761-646-7_3","title":"Analysis of Locus-Specific Changes in Methylation Patterns Using a COBRA (Combined Bisulfite Restriction Analysis) Assay","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"DNA methylation; Restriction enzyme; Locus (genetics); Bisulfite sequencing; Biology; Methylation; Molecular biology; Methylated DNA immunoprecipitation; Genetics; Chromatin; Gene; Illumina Methylation Assay; Gene expression","score_opus":0.02914075035069826,"score_gpt":0.3823893244795017,"score_spread":0.35324857412880345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W168626391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5104549,0.0003695445,0.48886964,0.000022942568,0.000111417205,0.000112806745,0.00001630077,0.0000038555104,0.000038641036],"genre_scores_gemma":[0.8395497,0.000528671,0.15937844,0.00002854145,0.00003764787,0.0000201706,0.00043167826,0.000018620478,0.000006492658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967419,0.0016189893,0.0005926324,0.00062570535,0.000118951626,0.00030185608],"domain_scores_gemma":[0.9987095,0.00017696526,0.00033276522,0.0005850207,0.00013732894,0.00005843904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002733889,0.00021761219,0.0005879715,0.0019722665,0.000031981457,0.000014601805,0.00021746318,0.00052070024,0.000034790508],"category_scores_gemma":[0.0005069204,0.00022348041,0.0002689039,0.003066683,0.00008936173,0.0000050801946,0.00010964646,0.00025473195,3.2806744e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039582228,0.00005770743,0.27689412,0.000004960022,0.00043458937,0.0000022371025,0.000031248128,0.006859587,0.7109164,0.00038836984,1.1922006e-7,0.0043710414],"study_design_scores_gemma":[0.00044958567,0.00016924522,0.08837427,0.0000045938136,0.0006083598,2.9746573e-7,0.000029620827,0.016187416,0.8929203,0.0006798013,0.00033347952,0.0002429969],"about_ca_topic_score_codex":0.00037617906,"about_ca_topic_score_gemma":0.0028362179,"teacher_disagreement_score":0.3294912,"about_ca_system_score_codex":0.000029877443,"about_ca_system_score_gemma":0.000036003155,"threshold_uncertainty_score":0.91132665},"labels":[],"label_agreement":null},{"id":"W170376101","doi":"10.1007/978-1-61779-953-2_37","title":"Scanning Transmission Electron Microscopy Methods for the Analysis of Nanoparticles","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"nanoparticles nucleation surface interactions","field":"Earth and Planetary Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Center for Research Resources; Canadian Institutes of Health Research; Welch Foundation; National Institutes of Health; National Science Foundation","keywords":"Scanning transmission electron microscopy; Dark field microscopy; Characterization (materials science); Materials science; Optics; Nanoparticle; Nanotechnology; Microscopy; Transmission electron microscopy; Physics","score_opus":0.03336350541452292,"score_gpt":0.4459599734007249,"score_spread":0.412596467986202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W170376101","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33709973,0.0025480553,0.6598781,0.00015933267,0.000116556024,0.00013311731,0.000009228966,0.0000088151755,0.000047117148],"genre_scores_gemma":[0.3363783,0.00002301832,0.663475,0.00008526455,0.000007964597,0.000005575588,0.000012214213,0.000002993816,0.000009704974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976942,0.0014165103,0.0003287876,0.00016940014,0.000045811106,0.00034527897],"domain_scores_gemma":[0.9975335,0.0020655026,0.0001091147,0.00019571089,0.000038613238,0.000057562258],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028899908,0.00009554975,0.0002572963,0.00021745336,0.00008074798,0.000010312665,0.00017606291,0.00007469011,0.00035135922],"category_scores_gemma":[0.00031160685,0.00006563588,0.00015264537,0.00090692606,0.00012482594,0.00006329168,0.000008472383,0.00010165527,0.0000039600045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038604543,0.00001551835,0.041900635,0.000002762127,0.0001281364,7.036833e-8,0.0002291283,0.003475451,0.76795834,0.00014689805,0.0000032847195,0.18610117],"study_design_scores_gemma":[0.00012468513,0.000077097786,0.032347154,0.000003297596,0.0002878859,0.0000014361691,0.00012316299,0.040164128,0.9192797,0.00073863275,0.006771375,0.000081420025],"about_ca_topic_score_codex":0.00031359823,"about_ca_topic_score_gemma":0.000057804886,"teacher_disagreement_score":0.18601975,"about_ca_system_score_codex":0.0000073291444,"about_ca_system_score_gemma":0.000017777285,"threshold_uncertainty_score":0.3847137},"labels":[],"label_agreement":null},{"id":"W171152000","doi":"10.1007/978-1-59745-385-1_14","title":"The Role of Health Economics within Clinical Research","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre; University of Calgary","funders":"","keywords":"Health care; Scarcity; Economic evaluation; Health economics; Medicine; Cost–benefit analysis; Clinical Practice; Clinical trial; Outcome (game theory); Business; Nursing; Economics; Political science; Economic growth","score_opus":0.8078296077716522,"score_gpt":0.7053679806877269,"score_spread":0.10246162708392537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W171152000","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000013361736,0.96500427,0.02864041,0.0018142633,0.0011363936,0.0015853817,0.00013954312,0.000014769656,0.0016516221],"genre_scores_gemma":[0.000001007788,0.8075396,0.19108781,0.00072857377,0.00017244557,0.00026124466,0.000047798192,0.00006516978,0.00009637989],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.92902225,0.047846127,0.020373208,0.0015312706,0.00008081763,0.0011462979],"domain_scores_gemma":[0.9738974,0.016435051,0.0077896374,0.0016074689,0.00009443057,0.00017600846],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.2198386,0.00038320033,0.0060775657,0.0008779131,0.0002890381,0.000032172164,0.001324084,0.0010026882,0.000028399354],"category_scores_gemma":[0.023984004,0.00036010557,0.0007679511,0.0005546876,0.0008707345,0.000050201346,0.0003541415,0.0015432012,0.00029152696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004547785,0.00007427185,0.00046080654,0.0014674006,0.0001821842,9.817472e-7,0.00022598897,0.0000082029355,1.2174897e-7,0.35450846,0.0005385562,0.6425285],"study_design_scores_gemma":[0.00016951222,0.00014204791,0.000014825104,0.0005586557,0.000005932567,0.00001509361,0.00014873872,0.00017020272,8.630023e-7,0.1095595,0.8889724,0.00024221551],"about_ca_topic_score_codex":0.000815974,"about_ca_topic_score_gemma":0.00010706223,"teacher_disagreement_score":0.8884339,"about_ca_system_score_codex":0.00084358914,"about_ca_system_score_gemma":0.0019880892,"threshold_uncertainty_score":0.9998851},"labels":[],"label_agreement":null},{"id":"W172384848","doi":"10.1007/978-1-62703-776-1_34","title":"3D Chemical Mapping: Application of Scanning Transmission (Soft) X-ray Microscopy (STXM) in Combination with Angle-Scan Tomography in Bio-, Geo-, and Environmental Sciences","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced X-ray Imaging Techniques","field":"Physics and Astronomy","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Tomography; Microscopy; Chemical imaging; Materials science; Optics; Nanotechnology; Remote sensing; Physics; Hyperspectral imaging; Geology","score_opus":0.008230630811583588,"score_gpt":0.3205133326796424,"score_spread":0.3122827018680588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W172384848","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42393124,0.00010894965,0.5756204,0.00005649198,0.000003977529,0.00023274156,0.000001840578,0.000007359754,0.000036985944],"genre_scores_gemma":[0.4933283,0.0000029234768,0.5065657,0.00001520939,0.0000020228026,0.000065293396,0.000014889696,0.0000052813516,4.183595e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896145,0.00022041409,0.00024297686,0.00032777517,0.000051755058,0.0001956104],"domain_scores_gemma":[0.9996782,0.00006541408,0.000099183475,0.00012177017,0.0000088547295,0.00002655458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042383076,0.0001242529,0.00021009512,0.00029903903,0.000022195789,0.000008296286,0.00013544415,0.00006273189,0.0000064562337],"category_scores_gemma":[0.0000061821142,0.00011261472,0.00002300495,0.0003765001,0.0003886777,0.000058557012,0.000044390934,0.00014802108,1.2791996e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000051824095,0.00006822064,0.21833238,0.0000057057546,0.000002633976,2.2894913e-7,0.00012906465,0.000030059586,0.6877412,0.0004454204,2.3147675e-7,0.09323967],"study_design_scores_gemma":[0.00065017503,0.00012039421,0.0210969,0.00006841864,0.0000041055523,8.787822e-7,0.00026658791,0.0070911767,0.938606,0.03181558,0.00009705479,0.00018271385],"about_ca_topic_score_codex":0.00024148397,"about_ca_topic_score_gemma":9.70481e-7,"teacher_disagreement_score":0.25086483,"about_ca_system_score_codex":0.000027271028,"about_ca_system_score_gemma":0.000013156459,"threshold_uncertainty_score":0.4592295},"labels":[],"label_agreement":null},{"id":"W17327725","doi":"10.1007/978-1-60327-394-7_5","title":"Synthesis of Peptide Arrays Using SPOT-Technology and the CelluSpots-Method","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cellulose; Peptide; Combinatorial chemistry; Chemistry; Nanotechnology; Materials science; Chromatography; Biochemistry","score_opus":0.03128179057193752,"score_gpt":0.43346339703644243,"score_spread":0.4021816064645049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W17327725","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000015289208,0.47818348,0.5211172,0.000050663064,0.00002599438,0.00044059468,0.000014362298,0.000013703079,0.0001386903],"genre_scores_gemma":[0.0000075346907,0.47700465,0.52277035,0.000048267528,0.000029639687,0.00007031099,0.000019411924,0.00003060137,0.000019261586],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960596,0.0019370411,0.00079385156,0.0007820983,0.00005971334,0.000367712],"domain_scores_gemma":[0.99788153,0.00037832718,0.00058803323,0.0010356226,0.00007224487,0.00004424805],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018269221,0.00045761748,0.0016423555,0.00040938507,0.0000727204,0.000008974414,0.0005686324,0.0010998972,0.0000020357813],"category_scores_gemma":[0.00083858497,0.00032396938,0.00039966934,0.0006725326,0.00080998463,0.000001391313,0.00039128846,0.0004399471,4.983594e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019560352,0.000027845605,0.000001545972,0.00035761396,0.000078158155,0.000004320909,0.000003869028,0.000009940509,0.108428776,0.009490262,0.000006702909,0.8815714],"study_design_scores_gemma":[0.0003622997,0.00013294606,4.8241054e-7,0.0011568663,0.00056245865,0.00024398034,0.000019733208,0.00013501715,0.1726839,0.028514238,0.79559803,0.0005900569],"about_ca_topic_score_codex":0.000014830744,"about_ca_topic_score_gemma":0.0000024734077,"teacher_disagreement_score":0.8809813,"about_ca_system_score_codex":0.000030002531,"about_ca_system_score_gemma":0.00011783665,"threshold_uncertainty_score":0.99992126},"labels":[],"label_agreement":null},{"id":"W173879652","doi":"10.1007/978-1-4939-2020-4_16","title":"Screening Peptide Array Library for the Identification of Cancer Cell-Binding Peptides","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biopanning; Phage display; Peptide; Peptide library; Cancer cell; Chemistry; Cell; Computational biology; Cancer; Biochemistry; Molecular biology; Combinatorial chemistry; Biology; Peptide sequence; Gene; Genetics","score_opus":0.09545477677171858,"score_gpt":0.5054923660861609,"score_spread":0.4100375893144423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W173879652","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000116503,0.6711983,0.32715622,0.00018446536,0.00014373296,0.00085868593,0.00007893297,0.00001088473,0.00035714125],"genre_scores_gemma":[0.0000019002175,0.7199107,0.2767663,0.0000744483,0.00016929283,0.00040772787,0.0002200796,0.00004916747,0.0024004057],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967928,0.0012829668,0.000976644,0.00044947662,0.00013096395,0.00036715707],"domain_scores_gemma":[0.9965488,0.0023644867,0.00051458075,0.00045015707,0.000055803754,0.000066206536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021823812,0.00029091063,0.0014777121,0.00022338699,0.00007402406,0.000015528978,0.00043680894,0.00035243502,0.000085822656],"category_scores_gemma":[0.00044449905,0.00017516484,0.0006562279,0.00030251118,0.00022879189,0.000025497267,0.00014082994,0.00046589668,0.000004008152],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053282052,0.000030284611,0.00019978521,0.012123354,0.00028283815,0.00000441619,0.000029786788,0.0000031352542,0.0389145,0.0007368554,0.00024344547,0.94737834],"study_design_scores_gemma":[0.00020063706,0.0001129987,0.000019673855,0.00270475,0.00050597126,0.00001392687,0.00002228327,0.0000913067,0.021726687,0.0002898738,0.9741371,0.00017474104],"about_ca_topic_score_codex":0.00014620043,"about_ca_topic_score_gemma":0.00000795507,"teacher_disagreement_score":0.9738937,"about_ca_system_score_codex":0.00003826183,"about_ca_system_score_gemma":0.00019431814,"threshold_uncertainty_score":0.7143015},"labels":[],"label_agreement":null},{"id":"W175095764","doi":"10.1007/978-1-61779-343-1_6","title":"Single Muscle-Fiber Isolation and Culture for Cellular, Molecular, Pharmacological, and Evolutionary Studies","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Myogenesis; Cell biology; Skeletal muscle; Myocyte; Zebrafish; Biology; Stem cell; Cell; Chemistry; Anatomy; Biochemistry; Gene","score_opus":0.0550579112882872,"score_gpt":0.3876958437440399,"score_spread":0.33263793245575274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W175095764","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58165795,0.025095055,0.39161023,0.00014468549,0.00017373158,0.00053986214,0.000014587591,0.000020893944,0.00074303674],"genre_scores_gemma":[0.32657716,0.00087322085,0.67098653,0.0010552679,0.000051043826,0.00019866072,0.00009986168,0.000027141134,0.00013112847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981757,0.0006176338,0.00025547127,0.000605239,0.00003319858,0.00031279467],"domain_scores_gemma":[0.9994981,0.000065508975,0.0000932027,0.00018877067,0.000087502245,0.000066872184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043857915,0.00023178411,0.00028479507,0.00007577816,0.000089296955,0.0000055599085,0.000121237914,0.00038357038,0.000020116782],"category_scores_gemma":[0.00033770327,0.00020586215,0.00008179551,0.00009104523,0.00044263856,0.0000056902586,0.00020522822,0.00012849444,9.90362e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020162541,0.00010698192,0.0004927724,0.000030327094,0.000117737334,0.0000047095136,0.00017601918,0.000008979051,0.98842186,0.00095977884,0.00017778153,0.009301414],"study_design_scores_gemma":[0.0017610354,0.0017188209,0.0014361677,0.000014119099,0.00011408878,0.000016632152,0.00027662772,0.00017712804,0.9114574,0.065721914,0.016805362,0.0005006962],"about_ca_topic_score_codex":0.0000074150585,"about_ca_topic_score_gemma":0.0000037214656,"teacher_disagreement_score":0.2793763,"about_ca_system_score_codex":0.00001170029,"about_ca_system_score_gemma":0.000019761213,"threshold_uncertainty_score":0.8394815},"labels":[],"label_agreement":null},{"id":"W176211925","doi":"10.1007/978-1-4939-2428-8_9","title":"Randomized Controlled Trials 1: Design","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Statistical Methods in Clinical Trials","field":"Mathematics","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Randomized controlled trial; Medicine; Internal medicine","score_opus":0.7531881906213166,"score_gpt":0.6760882135058548,"score_spread":0.07709997711546179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W176211925","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":"methods","model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010519196,0.000799819,0.9888135,0.00050493435,0.0014916485,0.004103062,0.000007212576,0.000094945055,0.004079686],"genre_scores_gemma":[0.00016014933,0.000043684347,0.9977966,0.00055114407,0.00017150801,0.0010543467,0.0000012404615,0.000046684498,0.0001746747],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.72110456,0.27249956,0.0048623406,0.000670625,0.00028193608,0.00058094226],"domain_scores_gemma":[0.36499384,0.632376,0.0013420327,0.0007556595,0.00026392244,0.00026851543],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.35545772,0.0003739155,0.010612626,0.00029301873,0.000024829013,0.000029622639,0.00046426165,0.00058777584,0.00022364767],"category_scores_gemma":[0.9395638,0.0002315723,0.0011938004,0.00034292316,0.00053405185,0.00001988912,0.00015374034,0.00045882945,0.00002241362],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.18188792,0.00020421755,0.000010212792,0.000021303698,0.00078495615,0.000059149213,0.000109381246,0.00003392021,0.020725114,0.77272004,0.00044325955,0.023000548],"study_design_scores_gemma":[0.30575845,0.00012214224,1.9377003e-7,0.000019352829,0.00035723305,0.0000043221035,0.00001673819,0.0012090715,0.012314505,0.67988205,0.00014154622,0.00017437027],"about_ca_topic_score_codex":0.000012360794,"about_ca_topic_score_gemma":5.600662e-7,"teacher_disagreement_score":0.5841061,"about_ca_system_score_codex":0.000071077106,"about_ca_system_score_gemma":0.00018067406,"threshold_uncertainty_score":0.9443244},"labels":[],"label_agreement":null},{"id":"W1774635941","doi":"10.1007/978-1-60327-009-0_5","title":"Endocrinology and Cell Signaling in Human Villous Trophoblast","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; Institut National de la Recherche Scientifique; Université du Québec à Montréal","funders":"","keywords":"Cytotrophoblast; Trophoblast; Placenta; Biology; Cell fusion; Phenotype; Cell biology; Secretion; Hormone; Endocrinology; Cell; Internal medicine; Fetus; Pregnancy; Genetics; Medicine; Gene","score_opus":0.02489333990103463,"score_gpt":0.37958428626296614,"score_spread":0.3546909463619315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1774635941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8469148,0.014353425,0.12866443,0.00076945365,0.00009626836,0.00035413844,0.0000015231932,0.000039746526,0.008806169],"genre_scores_gemma":[0.70376146,0.00021478244,0.29511356,0.0008322067,0.000018676772,0.000015270476,0.0000036045662,0.0000074206214,0.000033045406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832994,0.0006732145,0.00027425995,0.00033141804,0.0000335413,0.00035760034],"domain_scores_gemma":[0.9995712,0.00013539883,0.000046045523,0.00019189404,0.000014626993,0.000040801024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041376028,0.00014700902,0.0004435626,0.0002243637,0.000034344284,0.0000029304122,0.00007475429,0.00015900665,0.000015193986],"category_scores_gemma":[0.00014024417,0.00013193987,0.000048027385,0.00016375197,0.00013087779,0.000010464233,0.000060265986,0.00031557173,0.0000012321498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052120264,0.000069969545,0.014753522,0.000021508218,0.000011844064,0.00032001676,0.0002383929,0.000006929517,0.9616042,0.0025507861,0.0000026826183,0.02036807],"study_design_scores_gemma":[0.0034527737,0.001553855,0.033320267,0.00013252984,0.000045228433,0.00018283943,0.00014891734,0.000061335166,0.91486,0.044635147,0.0013163461,0.00029075268],"about_ca_topic_score_codex":0.000035413195,"about_ca_topic_score_gemma":0.00001170104,"teacher_disagreement_score":0.16644911,"about_ca_system_score_codex":0.000026707075,"about_ca_system_score_gemma":0.00001540108,"threshold_uncertainty_score":0.53803515},"labels":[],"label_agreement":null},{"id":"W177663743","doi":"10.1007/978-1-61779-591-6_11","title":"DNA Barcoding Methods for Land Plants","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":161,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"DNA barcoding; Biology; Barcode; Clade; Evolutionary biology; DNA extraction; Environmental DNA; Internal transcribed spacer; DNA sequencing; Computational biology; DNA; Polymerase chain reaction; Ecology; Genetics; Gene; Phylogenetics; Biodiversity; Computer science; Phylogenetic tree","score_opus":0.04289385290436788,"score_gpt":0.41856893704521897,"score_spread":0.3756750841408511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W177663743","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10558972,0.0016673049,0.8912112,0.00006399549,0.0005614547,0.00022008881,0.000024788838,0.000009253901,0.0006521654],"genre_scores_gemma":[0.069415264,0.000048308488,0.92950964,0.00050452846,0.00016562738,0.00002793154,0.00017426409,0.000017828766,0.00013660165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981268,0.00089567405,0.00021286002,0.0003078078,0.000035636298,0.00042120437],"domain_scores_gemma":[0.99942476,0.0000960066,0.00007529193,0.00027585236,0.00003329134,0.00009480191],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014674242,0.00016354186,0.00022260437,0.000093162365,0.00006243925,0.000009207509,0.0002058646,0.0003359284,0.00003376921],"category_scores_gemma":[0.0003921333,0.00015809172,0.00011058323,0.0000832926,0.00006606979,0.0000029874036,0.00014455408,0.00009862634,0.0000028469149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051547184,0.000019919647,0.027347047,0.00001160178,0.000038916478,4.8369805e-7,0.00006655157,0.000036018744,0.92878145,0.0011433344,0.00008980918,0.042413324],"study_design_scores_gemma":[0.00071614515,0.00011774195,0.0046741297,0.000005152127,0.000022383781,0.00002092688,0.00005073548,0.00008672051,0.81384754,0.0038618871,0.17633212,0.00026453796],"about_ca_topic_score_codex":0.000010061272,"about_ca_topic_score_gemma":0.000003699409,"teacher_disagreement_score":0.1762423,"about_ca_system_score_codex":0.000010796969,"about_ca_system_score_gemma":0.000020943533,"threshold_uncertainty_score":0.6446793},"labels":[],"label_agreement":null},{"id":"W177730080","doi":"10.1007/978-1-60327-279-7_9","title":"Methods to Determine Fitness in Bacteria","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Generation time; Bacteria; Burkholderia; Biology; Biofilm; Antibiotic resistance; Bacterial growth; Microbiology; Antibiotics; Medicine","score_opus":0.01974896472043183,"score_gpt":0.4070580235967588,"score_spread":0.387309058876327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W177730080","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5352206,0.00008193955,0.46329635,0.000113017835,0.0006260365,0.0002198234,0.000005944212,0.000009287882,0.00042695962],"genre_scores_gemma":[0.09183337,0.00001876007,0.907091,0.00061137957,0.000115744224,0.00005427189,0.000049292554,0.00004679108,0.00017936002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963337,0.0016177265,0.000556714,0.0008369015,0.00005931669,0.00059562403],"domain_scores_gemma":[0.9986586,0.00012769454,0.00010823675,0.00090945157,0.000062157844,0.00013385285],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025240532,0.00030756305,0.0004669648,0.00025943652,0.000029046982,0.00002400254,0.00060804083,0.0005884797,0.00010506558],"category_scores_gemma":[0.0018432367,0.00030329838,0.000109381464,0.0003801304,0.00019225768,0.000003939747,0.0003775898,0.0003760535,0.000011060068],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090699104,0.0000531532,0.019084593,0.000011783876,0.000014189416,0.000023000875,0.00003290217,0.0000094516545,0.93981266,0.0005504626,0.000020959995,0.040296152],"study_design_scores_gemma":[0.00052096153,0.00018614774,0.035211574,0.000014357804,0.0000068973045,0.00003358171,0.000021616828,0.0000572785,0.9368637,0.0016547639,0.025047433,0.0003816759],"about_ca_topic_score_codex":0.000051541134,"about_ca_topic_score_gemma":0.00028830025,"teacher_disagreement_score":0.44379467,"about_ca_system_score_codex":0.000023470748,"about_ca_system_score_gemma":0.00007793136,"threshold_uncertainty_score":0.9999419},"labels":[],"label_agreement":null},{"id":"W1778232793","doi":"10.1007/978-1-4939-3079-1_15","title":"Single-Step Affinity Purification (ssAP) and Mass Spectrometry of Macromolecular Complexes in the Yeast S. cerevisiae","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Macromolecule; Yeast; Lysis; Saccharomyces cerevisiae; Mass spectrometry; Computational biology; Chemistry; RNA; Protein–protein interaction; Tandem affinity purification; Epitope; Biophysics; Affinity chromatography; Biology; Biochemistry; Chromatography; Genetics; Antibody; Gene","score_opus":0.05290386722959242,"score_gpt":0.38644411573754056,"score_spread":0.33354024850794817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1778232793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6439547,0.00500802,0.3485856,0.00032521907,0.00007519799,0.00034084142,0.0000212802,0.0000047322287,0.0016843872],"genre_scores_gemma":[0.64393306,0.00015333093,0.3555946,0.00014862428,0.0000420076,0.000028684502,0.00006127978,0.000018068373,0.0000203272],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99680054,0.0019332416,0.00035201383,0.00043403415,0.00015042741,0.0003297575],"domain_scores_gemma":[0.9991635,0.00006507329,0.000097888216,0.0005014086,0.000094958144,0.000077142795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021255529,0.00017595314,0.0002785228,0.00018809359,0.000022886454,0.00001891043,0.0004229704,0.00022617201,0.000007399868],"category_scores_gemma":[0.0006568875,0.00014195636,0.000068538924,0.0004112598,0.00029638337,0.00000253199,0.000186672,0.00022303387,0.0000020298442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007200116,0.000106996624,0.0061904173,0.00002503994,0.000019615973,0.000012442878,0.00007530624,0.00002530477,0.98686796,0.000972623,0.000030709252,0.005601553],"study_design_scores_gemma":[0.00070045557,0.00061112404,0.0024894478,0.000013239601,0.000010434129,0.00003592678,0.00022285026,0.00020265872,0.9855478,0.005366875,0.0046152077,0.0001839702],"about_ca_topic_score_codex":0.000055087854,"about_ca_topic_score_gemma":0.000027024853,"teacher_disagreement_score":0.0070089805,"about_ca_system_score_codex":0.000021693495,"about_ca_system_score_gemma":0.00006387015,"threshold_uncertainty_score":0.57888126},"labels":[],"label_agreement":null},{"id":"W178437326","doi":"10.1007/978-1-59745-257-1_11","title":"Specialized Techniques for Site-Directed Mutagenesis in Cyanobacteria","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":163,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Paul University","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences","keywords":"Insertional mutagenesis; Mutagenesis; Biology; Genetics; Gene; Transformation (genetics); Chromosome; Homologous recombination; Cyanobacteria; Genome; Mutation; Bacteria","score_opus":0.01603430489753038,"score_gpt":0.3813462581284322,"score_spread":0.3653119532309018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W178437326","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24762689,0.00023189651,0.7506905,0.00003984942,0.00018998256,0.00048048186,0.00001892155,0.00003534683,0.00068609323],"genre_scores_gemma":[0.12494554,0.000123225,0.87387854,0.0004932301,0.000119053875,0.00018020181,0.00013392337,0.00004503611,0.00008123472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805075,0.0003495563,0.00044252403,0.00057806016,0.000049660717,0.0005294388],"domain_scores_gemma":[0.99929076,0.000090770736,0.00011015715,0.00036576166,0.00007283103,0.00006971803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022345732,0.00023053729,0.00035816254,0.00023377553,0.000030549978,0.0000104300725,0.00027000823,0.00046127924,0.000022741291],"category_scores_gemma":[0.0007351884,0.00022987071,0.00012593725,0.0002761592,0.0000792947,0.0000023080875,0.00012961673,0.00010625128,0.0000013077249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028723362,0.000074532116,0.000358345,0.000019175306,0.000015944235,0.000014291672,0.000028596927,0.0000010565165,0.9709515,0.00088999025,0.000006254985,0.02735306],"study_design_scores_gemma":[0.00066928176,0.00027396754,0.00019560005,0.000015449063,0.000010486377,0.00001550327,0.000023660521,0.000034372726,0.96272194,0.005520059,0.030254744,0.0002649082],"about_ca_topic_score_codex":0.00005642452,"about_ca_topic_score_gemma":0.00022331814,"teacher_disagreement_score":0.12318801,"about_ca_system_score_codex":0.000036228434,"about_ca_system_score_gemma":0.00006536546,"threshold_uncertainty_score":0.93738556},"labels":[],"label_agreement":null},{"id":"W178589960","doi":"10.1007/978-1-59745-419-3_10","title":"Serum Stability of Peptides","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":113,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Peptide; In vivo; Antimicrobial; Antimicrobial peptides; Drug; In vitro; Pharmacology; Chemistry; Biology; Microbiology; Biotechnology; Biochemistry","score_opus":0.03223878861267708,"score_gpt":0.34012195119106586,"score_spread":0.30788316257838877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W178589960","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8174549,0.0011993577,0.17910993,0.00009465923,0.00028172313,0.00013853995,0.000027558433,0.000027339942,0.0016659992],"genre_scores_gemma":[0.78092575,0.00008257466,0.21860549,0.00014999621,0.000007128703,0.0000081563885,0.000017158964,0.0000111490235,0.00019256976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782205,0.0012175039,0.00035061035,0.00028621368,0.0000121064895,0.00031150013],"domain_scores_gemma":[0.9992667,0.00026934635,0.0001129954,0.00029472893,0.000044733257,0.000011531591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066089776,0.00014724885,0.0004321343,0.00011689201,0.000058912687,0.0000012785575,0.00019974509,0.0002782648,0.00035627236],"category_scores_gemma":[0.00026597912,0.00013066699,0.00012763067,0.00015103689,0.0008718435,0.000028565126,0.00012461818,0.00024844654,0.00002040512],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044450786,0.00008514157,0.0285059,0.000014334582,0.000041444342,0.0000077700215,0.00023050942,0.0000036242643,0.96479225,0.0022629718,0.00006138205,0.0039501945],"study_design_scores_gemma":[0.00042879357,0.000138464,0.0062084873,0.000010101021,0.00000817459,0.00006572559,0.00013588557,0.00000199733,0.9885616,0.0021510127,0.00215598,0.00013382992],"about_ca_topic_score_codex":0.00018809851,"about_ca_topic_score_gemma":0.000014137205,"teacher_disagreement_score":0.03949556,"about_ca_system_score_codex":0.000019738965,"about_ca_system_score_gemma":0.000048829304,"threshold_uncertainty_score":0.53284454},"labels":[],"label_agreement":null},{"id":"W178775728","doi":"10.1007/978-1-59745-062-1_11","title":"The use of Fluorescent in situ Hybridisation in Plant Fungal Identification and Genotyping","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"In situ hybridisation; Identification (biology); Biology; Fish <Actinopterygii>; Immunocytochemistry; Genotyping; In situ; Fluorescence; Cytogenetics; Molecular cytogenetics; Computational biology; Botany; Chemistry; Genetics; Chromosome; Gene; Optics; Physics; Fishery","score_opus":0.05350444752221417,"score_gpt":0.3134915969042607,"score_spread":0.25998714938204653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W178775728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99386525,0.00056652696,0.005029087,0.00021659961,0.00009992583,0.00014257696,0.000043710304,0.0000040513746,0.000032247477],"genre_scores_gemma":[0.9809501,0.0017112049,0.017031174,0.00006659236,0.000016750833,0.000017703516,0.00019390832,6.4849047e-7,0.000011873521],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99875057,0.00068789936,0.0002540531,0.00014923803,0.000033925317,0.00012431052],"domain_scores_gemma":[0.9982757,0.0015893797,0.0000645152,0.000041126186,0.000014288166,0.000015017265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005672228,0.00005646938,0.00010561774,0.000033529,0.00004692908,0.0000086665295,0.00007507442,0.00006249098,0.000013307185],"category_scores_gemma":[0.00049936376,0.000023415454,0.000021434842,0.00018569082,0.000021985428,0.000034087552,0.000030900712,0.00010870826,0.0000019442502],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032887772,0.000019541041,0.09819832,0.0000015781563,0.0000017610168,0.000007926808,0.000067292305,0.000030579675,0.8806022,0.0011299982,0.0000124251255,0.019895518],"study_design_scores_gemma":[0.00011378066,0.00010173931,0.6465816,0.00004662831,0.000004509142,0.00009204491,0.000121868165,0.0026749617,0.33874646,0.0036987448,0.007652964,0.00016471987],"about_ca_topic_score_codex":0.0010947207,"about_ca_topic_score_gemma":0.0014067696,"teacher_disagreement_score":0.5483833,"about_ca_system_score_codex":0.000016621949,"about_ca_system_score_gemma":0.0000044275266,"threshold_uncertainty_score":0.16548975},"labels":[],"label_agreement":null},{"id":"W179307736","doi":"10.1007/978-1-61779-105-5_28","title":"Chemical Modifications of Atomic Force Microscopy Tips","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Force Microscopy Techniques and Applications","field":"Physics and Astronomy","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Atomic force microscopy; Nanotechnology; Scanning probe microscopy; Microscopy; Chemical force microscopy; Molecule; Materials science; Scanning Force Microscopy; Force spectroscopy; Conductive atomic force microscopy; Chemistry; Non-contact atomic force microscopy; Optics; Physics; Organic chemistry","score_opus":0.05104670590947765,"score_gpt":0.47081359779101606,"score_spread":0.41976689188153843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W179307736","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007335434,0.416749,0.58056176,0.000002598715,0.000030343606,0.00042965767,0.00010219941,0.000016443304,0.0021006607],"genre_scores_gemma":[0.000009844545,0.3070806,0.6919387,0.000009180999,0.000026621085,0.00053329696,0.00023407492,0.00004452344,0.00012316975],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980044,0.0004259808,0.0007559702,0.0004903582,0.000026575872,0.00029676405],"domain_scores_gemma":[0.9986055,0.0001280062,0.00042597306,0.0007496839,0.000041252937,0.000049588765],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040101647,0.00032932588,0.001213529,0.00018576381,0.000028242086,0.000007030766,0.0006148248,0.00035089432,0.0001364243],"category_scores_gemma":[0.000014046514,0.00029790343,0.00048510442,0.0003552527,0.00023142758,0.000011753939,0.00017974424,0.00041898145,0.000017230079],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000015287177,0.00009472904,0.000007611408,0.0004762463,0.00007564446,1.9879009e-7,0.000023219873,1.0054535e-7,0.12292191,0.2396812,0.000054672004,0.63666296],"study_design_scores_gemma":[0.000091207294,0.000019270696,1.6351737e-7,0.000600894,0.00019872868,0.000003413641,0.000004413317,0.00001041928,0.09902002,0.047411263,0.85231286,0.0003273403],"about_ca_topic_score_codex":0.00009608569,"about_ca_topic_score_gemma":2.179904e-7,"teacher_disagreement_score":0.8522582,"about_ca_system_score_codex":0.00003980706,"about_ca_system_score_gemma":0.0001330124,"threshold_uncertainty_score":0.9999473},"labels":[],"label_agreement":null},{"id":"W179470260","doi":"10.1007/978-1-62703-227-8_19","title":"Reconstitution of Skin Fibrosis Development Using a Tissue Engineering Approach","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Dermis; Epidermis (zoology); Skin equivalent; Fibrosis; In vivo; Human skin; Tissue engineering; Pathology; Extracellular matrix; Artificial skin; In vitro; Biology; Medicine; Biomedical engineering; Cell biology; Keratinocyte; Anatomy","score_opus":0.038560328877274105,"score_gpt":0.3862489086780198,"score_spread":0.3476885798007457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W179470260","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33568445,0.002477895,0.66112256,0.0000034087511,0.0001223772,0.00014069214,0.0000022171303,0.0000051054867,0.0004413181],"genre_scores_gemma":[0.2699801,0.000032371132,0.72976464,0.00001862991,0.000058771235,0.00002956752,0.00007296326,0.000014409847,0.00002854277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827087,0.0005633043,0.0003313127,0.00031428918,0.000059415503,0.00046079946],"domain_scores_gemma":[0.999472,0.0000322762,0.00007846057,0.00029371277,0.00004382887,0.00007971165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015179329,0.00017019242,0.0002578223,0.00016881933,0.00003277652,0.0000039078827,0.0002062422,0.00037049872,0.000012538394],"category_scores_gemma":[0.00027975108,0.00016507538,0.00006968589,0.00021022772,0.00015173508,0.0000032435828,0.00019389024,0.00014552125,0.000002152134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032670872,0.00008184761,0.0053788973,0.000031616495,0.00004784298,0.0000015958435,0.00005883983,0.00019959813,0.9841957,0.0006074654,0.000004002606,0.009359888],"study_design_scores_gemma":[0.0002558814,0.000073953976,0.00048721538,0.000011875698,0.000008769239,0.00007840195,0.00003094461,0.00034138595,0.99078345,0.00003039319,0.007714006,0.00018370473],"about_ca_topic_score_codex":0.000017427506,"about_ca_topic_score_gemma":9.651546e-7,"teacher_disagreement_score":0.06864209,"about_ca_system_score_codex":0.000032506283,"about_ca_system_score_gemma":0.000086777465,"threshold_uncertainty_score":0.67315793},"labels":[],"label_agreement":null},{"id":"W179797905","doi":"10.1007/978-1-62703-239-1_10","title":"Detection of the Senescence-Associated Secretory Phenotype (SASP)","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Institut Du Cancer de Montréal","keywords":"Senescence; Phenotype; Secretion; Paracrine signalling; Cell biology; Biology; Cell; Cell type; Cancer cell; Cancer; Genetics; Gene; Biochemistry; Receptor","score_opus":0.026043958782530942,"score_gpt":0.3671395464462617,"score_spread":0.3410955876637307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W179797905","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7115658,0.0019373746,0.28438464,0.00014996383,0.00092138274,0.00029315875,0.0000035249257,0.00003593614,0.0007082259],"genre_scores_gemma":[0.92377037,0.00004223264,0.07553956,0.00046093608,0.0000623254,0.00001259868,0.0000053193044,0.000017432862,0.000089205605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769413,0.0013342688,0.0003060487,0.00020092593,0.00010764896,0.0003569641],"domain_scores_gemma":[0.99915147,0.00017619113,0.00014459163,0.00037776338,0.00007526495,0.0000747009],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013120197,0.00013769821,0.0003435446,0.00012049358,0.000040695653,0.0000018984348,0.0001423766,0.0002569443,0.0000380768],"category_scores_gemma":[0.0013009539,0.00009844426,0.00012376571,0.00049719727,0.00020536507,0.000023836963,0.000073073774,0.00028972045,0.000004560798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043596574,0.000093434006,0.08289499,0.000021842794,0.000031506723,0.0000025982959,0.00024168004,0.0000013060005,0.8858598,0.00031487792,0.000004088431,0.030490309],"study_design_scores_gemma":[0.000523672,0.000120045035,0.18054214,0.00004376049,0.00005595754,0.00001942042,0.000099990015,0.000101455116,0.81624895,0.00061512087,0.0015084316,0.000121076395],"about_ca_topic_score_codex":0.00013893301,"about_ca_topic_score_gemma":0.000024722258,"teacher_disagreement_score":0.2122046,"about_ca_system_score_codex":0.00008411063,"about_ca_system_score_gemma":0.00006211386,"threshold_uncertainty_score":0.40144402},"labels":[],"label_agreement":null},{"id":"W180303537","doi":"10.1007/978-1-61779-231-1_1","title":"Challenges Facing the Forest Industry in Relation to Seed Dormancy and Seed Quality","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Government of British Columbia; Ministry of Forests","funders":"","keywords":"Germination; Dormancy; Seed dormancy; Biology; Sowing; Horticulture; Botany; Agronomy","score_opus":0.13659488731948902,"score_gpt":0.39823596618505086,"score_spread":0.26164107886556187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W180303537","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99415237,0.0004114491,0.0015037324,0.0019145265,0.00007839461,0.00018490881,0.0000020464524,0.00001463011,0.0017379468],"genre_scores_gemma":[0.98243475,0.00006016645,0.016581059,0.00083569065,0.00002501179,0.00003226695,0.000007449841,8.586261e-7,0.0000227486],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99784094,0.0014533203,0.00022085922,0.00026016135,0.00003333609,0.00019137764],"domain_scores_gemma":[0.99944204,0.00036397317,0.000060727965,0.00006855135,0.000026252705,0.000038445334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013989825,0.0000940247,0.00016531316,0.00003396726,0.000042534917,0.0000050394106,0.00014628204,0.00039715512,0.000025432188],"category_scores_gemma":[0.0003767664,0.000036615027,0.000026417285,0.00025880316,0.000067265224,0.000025206928,0.00009095928,0.00035121848,0.0000036012523],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031616346,0.00003092462,0.106397375,0.0000040540767,0.0000043908917,0.0000022768315,0.0010200761,0.000008702688,0.7908096,0.008529809,9.447088e-7,0.093160264],"study_design_scores_gemma":[0.00009962672,0.00011374151,0.9745766,0.0000074114323,0.0000016342644,0.0000026567518,0.0006015272,0.000047528745,0.00702857,0.01692312,0.0005058656,0.00009175368],"about_ca_topic_score_codex":0.0004345962,"about_ca_topic_score_gemma":0.00070512225,"teacher_disagreement_score":0.8681792,"about_ca_system_score_codex":0.000012215875,"about_ca_system_score_gemma":0.000004144706,"threshold_uncertainty_score":0.3063224},"labels":[],"label_agreement":null},{"id":"W180462973","doi":"10.1007/978-1-61779-160-4_13","title":"Real-Time BRET Assays to Measure G Protein/Effector Interactions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Effector; Adenylyl cyclase; Förster resonance energy transfer; Ligand (biochemistry); Kinetics; Measure (data warehouse); Protein–protein interaction; Stimulation; Chemistry; Cell biology; Biophysics; Biology; Computational biology; Signal transduction; Receptor; Neuroscience; Biochemistry; Physics; Computer science; Data mining","score_opus":0.03129533463386948,"score_gpt":0.35562707879568495,"score_spread":0.3243317441618155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W180462973","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18106146,0.00010949738,0.8127367,0.000055549204,0.00029829782,0.0005664511,0.000013453587,0.00003067595,0.0051279203],"genre_scores_gemma":[0.07153349,0.00001357367,0.9271763,0.0002676713,0.000115119125,0.0002536269,0.000051099094,0.000052985633,0.0005361586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99721223,0.0013628742,0.0003272177,0.0006082601,0.00007597719,0.0004134482],"domain_scores_gemma":[0.9991406,0.000032858206,0.00008943693,0.0005047089,0.00009447726,0.00013791378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001364632,0.00024619562,0.00030761247,0.00015842482,0.000054004904,0.000012770985,0.0003312934,0.00030228414,0.00046197698],"category_scores_gemma":[0.000500411,0.00023212838,0.00015223293,0.00021335193,0.000054658758,0.0000033975243,0.0001941837,0.00019524047,0.000065967564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106396314,0.000060840124,0.0001307571,0.0000069711064,0.000050945757,0.000012312415,0.00008948763,0.000012300203,0.9923625,0.001219225,0.00009164192,0.0058566486],"study_design_scores_gemma":[0.0002783845,0.0005474124,0.0000843848,0.000024636118,0.000013489368,0.000018130992,0.00002199138,0.000064602464,0.9909712,0.0020647214,0.00562799,0.0002830552],"about_ca_topic_score_codex":0.00012609793,"about_ca_topic_score_gemma":0.000018550061,"teacher_disagreement_score":0.11443958,"about_ca_system_score_codex":0.00003088722,"about_ca_system_score_gemma":0.000055276632,"threshold_uncertainty_score":0.9465921},"labels":[],"label_agreement":null},{"id":"W1810873884","doi":"10.1007/978-1-4939-3079-1_12","title":"Systematic Determination of Transcription Factor DNA-Binding Specificities in Yeast","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Canadian Institutes of Health Research","keywords":"Yeast; Computational biology; Transcription factor; Biology; DNA binding site; Genetics; DNA; DNA microarray; Transcription (linguistics); Gene; Promoter; Gene expression","score_opus":0.03149760359470433,"score_gpt":0.34118755416411034,"score_spread":0.309689950569406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1810873884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60093814,0.00035812208,0.39808282,0.000009951415,0.0001648675,0.00019269895,0.000012901891,0.0000031059897,0.00023738231],"genre_scores_gemma":[0.73548603,0.00003932427,0.26427546,0.000021224996,0.000019378333,0.000030445332,0.000059899405,0.000017215652,0.000051057217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983447,0.0006875277,0.0004683604,0.00024863586,0.00006132471,0.0001894408],"domain_scores_gemma":[0.99949276,0.000021481352,0.00014989685,0.00024235348,0.00005501891,0.00003848483],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008869364,0.00013466332,0.00031444314,0.00017845942,0.000009622318,0.000007599626,0.00017687447,0.00021748613,0.0000034332818],"category_scores_gemma":[0.0002911172,0.00013300778,0.00007295852,0.00012889957,0.00006799816,0.00000270978,0.000049477527,0.00007998792,0.0000013379649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019988038,0.00003403415,0.0010476068,0.00038610198,0.000010543208,0.0000035632524,0.00024154056,0.000042321928,0.99666756,0.0006166627,0.0000010171154,0.0009290429],"study_design_scores_gemma":[0.00084538886,0.000304311,0.00059770414,0.00026515947,0.00001624086,0.0000200575,0.00083437253,0.002749007,0.99107665,0.0029488464,0.00009233284,0.00024990484],"about_ca_topic_score_codex":0.000018201976,"about_ca_topic_score_gemma":0.00005522444,"teacher_disagreement_score":0.13454787,"about_ca_system_score_codex":0.000050468247,"about_ca_system_score_gemma":0.000046044974,"threshold_uncertainty_score":0.54239},"labels":[],"label_agreement":null},{"id":"W182013528","doi":"10.1007/978-1-59745-117-8_20","title":"Pattern Recognition Approaches for Classifying Proteomic Mass Spectra of Biofluids","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Institute for Biodiagnostics","funders":"","keywords":"Pattern recognition (psychology); Raman spectroscopy; Mass spectrum; Artificial intelligence; Mass spectrometry; Computer science; Computational biology; Chemistry; Chromatography; Physics; Biology; Optics","score_opus":0.09285013329552544,"score_gpt":0.41977751539849906,"score_spread":0.3269273821029736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W182013528","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17128375,0.00039759756,0.82698107,0.00012310626,0.00005522953,0.00046911355,0.000025934947,0.0000152075045,0.0006489839],"genre_scores_gemma":[0.08893564,0.00032321448,0.9098395,0.00014194398,0.00009890812,0.00037510673,0.00020695059,0.000029444553,0.000049296093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982479,0.00036944376,0.00037956258,0.0005008307,0.00009754126,0.00040471996],"domain_scores_gemma":[0.9993697,0.00007281248,0.00009127739,0.0003278879,0.00006367463,0.00007465331],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007555553,0.0001761433,0.0002951464,0.0001300754,0.000038413105,0.0000036086474,0.00031853825,0.00045477605,0.000024818122],"category_scores_gemma":[0.0006228147,0.00015870233,0.00015983597,0.00018910549,0.00048473125,0.0000019866252,0.00011907526,0.00021098097,0.0000011932027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010362403,0.00008122605,0.0022129354,0.000055104898,0.000030362291,0.0000041717117,0.00001005902,5.289337e-7,0.96325314,0.00011237701,0.00008631341,0.03405015],"study_design_scores_gemma":[0.0004999044,0.0006020262,0.00010957295,0.000018842738,0.000007336225,0.000018824865,0.0000146248185,0.0002248746,0.9851963,0.011336395,0.001789377,0.00018193251],"about_ca_topic_score_codex":0.000014891226,"about_ca_topic_score_gemma":0.0000011523715,"teacher_disagreement_score":0.08285842,"about_ca_system_score_codex":0.000031948606,"about_ca_system_score_gemma":0.00007157498,"threshold_uncertainty_score":0.64716935},"labels":[],"label_agreement":null},{"id":"W182826799","doi":"10.1007/978-1-60327-015-1_18","title":"Profiling Genome-Wide Histone Modifications and Variants by ChIP-chip on Tiling Microarrays in S. cerevisiae","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Chromatin immunoprecipitation; Histone; Computational biology; Tiling array; Chromatin; ChIP-on-chip; Biology; DNA microarray; ChIP-sequencing; Genetics; Histone code; Histone H2A; Chromatin remodeling; Nucleosome; DNA; Gene; Promoter; Gene expression","score_opus":0.013757071382047924,"score_gpt":0.33659855028822,"score_spread":0.3228414789061721,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W182826799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6935678,0.0026071477,0.3020588,0.00023209031,0.00006063275,0.00027596584,0.000021185138,0.000008694133,0.0011676791],"genre_scores_gemma":[0.58703125,0.0004223532,0.41139066,0.00078707485,0.00002770586,0.000026798267,0.000227531,0.00002527648,0.00006137873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980343,0.00047902743,0.00041700643,0.0006466964,0.0000462738,0.000376668],"domain_scores_gemma":[0.99925363,0.000047169367,0.00014593516,0.00045175382,0.000029048402,0.000072449766],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00079054205,0.00023818802,0.00030544124,0.000152361,0.000057047375,0.000017973325,0.00025400278,0.0003170044,0.0000045408447],"category_scores_gemma":[0.0003240061,0.00025027792,0.00006376343,0.00016098763,0.00009050807,0.0000022860268,0.00008078507,0.00024062752,0.000002370932],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030332569,0.00009484407,0.0018924598,0.00001059229,0.000014474579,0.000005210956,0.000043407053,0.00035934936,0.9895002,0.0013953493,0.000008174629,0.006645552],"study_design_scores_gemma":[0.002012565,0.00090099254,0.025484104,0.00004981819,0.000033868535,0.000042422907,0.00011668934,0.0047219396,0.948646,0.012866541,0.0041304575,0.0009945971],"about_ca_topic_score_codex":0.000014460152,"about_ca_topic_score_gemma":0.000009352785,"teacher_disagreement_score":0.10933187,"about_ca_system_score_codex":0.000051619973,"about_ca_system_score_gemma":0.000048689515,"threshold_uncertainty_score":0.99999493},"labels":[],"label_agreement":null},{"id":"W182967772","doi":"10.1007/978-1-60327-567-5_6","title":"Label-Free Detection with the Resonant Mirror Biosensor","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BioPhage Pharma (Canada)","funders":"","keywords":"Biosensor; Evanescent wave; Analyte; Nanotechnology; Instrumentation (computer programming); Waveguide; Refractive index; Materials science; Chemistry; Optoelectronics; Computer science; Chromatography","score_opus":0.0946273473944677,"score_gpt":0.49446101826285105,"score_spread":0.39983367086838334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W182967772","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000026666246,0.9752355,0.021197172,0.0011309956,0.00010521532,0.0011370387,0.000025175163,0.000029634786,0.0011126058],"genre_scores_gemma":[5.0736907e-7,0.72492385,0.27323312,0.00044743172,0.000074056414,0.0001129265,0.000043095686,0.00003909957,0.0011258805],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951242,0.0029962605,0.00048755496,0.0006134934,0.00021390454,0.0005645707],"domain_scores_gemma":[0.9980353,0.0006895463,0.00018346935,0.0008898312,0.000085492116,0.000116352574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016568816,0.0004426173,0.0016431347,0.00036343816,0.00008612206,0.000014065153,0.0004998388,0.0005611485,0.000035103527],"category_scores_gemma":[0.0005157973,0.00020981688,0.00034699732,0.00072724913,0.00035880913,0.000008946751,0.00019688073,0.0012290947,0.000029829378],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001440382,0.000065421154,0.0000045449965,0.001414177,0.00016439824,0.0003456125,0.000012123651,1.448993e-8,0.005136885,0.0004846574,0.000056406723,0.9921717],"study_design_scores_gemma":[0.0004947072,0.0009815467,0.000030331143,0.0016431877,0.0003553556,0.0007443305,0.000006837185,0.000008003269,0.0012105253,0.00045059764,0.9938231,0.0002514402],"about_ca_topic_score_codex":0.00016188205,"about_ca_topic_score_gemma":0.000091998016,"teacher_disagreement_score":0.9937667,"about_ca_system_score_codex":0.00009902814,"about_ca_system_score_gemma":0.00022580932,"threshold_uncertainty_score":0.8556084},"labels":[],"label_agreement":null},{"id":"W1831548991","doi":"10.1007/978-1-4939-3167-5_9","title":"MaizeGDB: The Maize Genetics and Genomics Database","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto","keywords":"Zea mays; Genomics; Product (mathematics); Genomic information; Matching (statistics); Biology; Database; Computer science; World Wide Web; Genetics; Genome; Gene; Agronomy","score_opus":0.04162179580076706,"score_gpt":0.3743503322337079,"score_spread":0.3327285364329408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1831548991","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6312629,0.021973982,0.34452662,0.0004968929,0.00035460063,0.00031645858,0.000035795256,0.000004364577,0.001028408],"genre_scores_gemma":[0.17262897,0.002336774,0.8229564,0.0015900508,0.00019046338,0.00006691985,0.000054091914,0.000044927132,0.00013143879],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822664,0.00066217914,0.00026097058,0.00046081547,0.000054286458,0.0003351115],"domain_scores_gemma":[0.99912786,0.000058946807,0.00007293764,0.0005746473,0.00006287413,0.0001027416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013109348,0.0002035159,0.00022082574,0.000050550632,0.00005931568,0.000018404116,0.00032250743,0.00017621707,0.0000027269807],"category_scores_gemma":[0.00031687922,0.00015711211,0.000055389148,0.00010207779,0.000307875,4.5979925e-7,0.00061318825,0.00013728053,0.0000027557603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040363946,0.00002021529,0.0063471957,0.000004900154,0.00005235436,0.00000617617,0.00009873603,0.00014032012,0.9831078,0.0011936998,0.0001638067,0.008824448],"study_design_scores_gemma":[0.0019465444,0.0006450944,0.0041295392,0.000007697328,0.000066808396,0.00013342632,0.00048601071,0.00069907965,0.64120317,0.021181222,0.32880715,0.00069423375],"about_ca_topic_score_codex":0.000034643206,"about_ca_topic_score_gemma":0.000038863247,"teacher_disagreement_score":0.47842976,"about_ca_system_score_codex":0.000017181177,"about_ca_system_score_gemma":0.00008601197,"threshold_uncertainty_score":0.6406846},"labels":[],"label_agreement":null},{"id":"W1836167106","doi":"10.1007/978-1-62703-992-5_8","title":"Design and Generation of Synthetic Antibody Libraries for Phage Display","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Phage display; Computational biology; Antibody; Synthetic biology; Complementarity determining region; Complementarity (molecular biology); Peptide library; Oligonucleotide; Biology; Computer science; Genetics; Peptide sequence; Monoclonal antibody; Gene","score_opus":0.06873594902610305,"score_gpt":0.44997363959620806,"score_spread":0.38123769057010504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1836167106","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12854566,0.00083679584,0.869547,0.0005193169,0.000051500167,0.00030327734,0.0000032799749,0.000005616825,0.00018755508],"genre_scores_gemma":[0.06864127,0.00008707984,0.9308029,0.0002085697,0.000037897687,0.000030515179,0.00003723648,0.000010453935,0.00014412247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986426,0.0007461011,0.00019200589,0.0002007537,0.000048770275,0.00016977284],"domain_scores_gemma":[0.9990876,0.0006568165,0.00004072802,0.00013206157,0.000037248356,0.00004558853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011384777,0.000086697306,0.0002841014,0.00010813628,0.000027837026,0.000005421348,0.000057787816,0.00009827683,0.000017319226],"category_scores_gemma":[0.000580358,0.00006441898,0.000044399218,0.00007912937,0.00019779414,0.000015436644,0.00004544411,0.000080451035,6.2785836e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001756474,0.00003488707,0.002990618,0.00008963895,0.000025189389,0.0000035826486,0.000048914415,0.00001639182,0.94070107,0.02882192,0.000013717307,0.02707841],"study_design_scores_gemma":[0.0006673969,0.0008607743,0.0013864586,0.000029323059,0.000029390894,0.000025177267,0.0000070761853,0.042016014,0.93691206,0.014153757,0.003824317,0.00008822935],"about_ca_topic_score_codex":0.000011414848,"about_ca_topic_score_gemma":5.7552626e-7,"teacher_disagreement_score":0.061255857,"about_ca_system_score_codex":0.000004771775,"about_ca_system_score_gemma":0.00002739129,"threshold_uncertainty_score":0.26269296},"labels":[],"label_agreement":null},{"id":"W1837861097","doi":"10.1007/978-1-61779-046-1_9","title":"Detection of Human Dicer and Argonaute 2 Catalytic Activity","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Dicer; Argonaute; microRNA; Gene silencing; Cell biology; RNase P; Ribonuclease III; Biology; RNA interference; Ribonuclease; Biogenesis; Computational biology; RNA; Genetics; Gene","score_opus":0.02591262797783386,"score_gpt":0.3580762744369347,"score_spread":0.33216364645910085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1837861097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6559877,0.00042498537,0.34300807,0.000004190715,0.00004473849,0.00010553811,0.0000035453425,0.000004682888,0.00041659913],"genre_scores_gemma":[0.92215466,0.000020934265,0.07771099,0.000026764326,0.000018216931,0.000018086292,0.000017341368,0.000014380061,0.000018616121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988496,0.0004619317,0.00018120672,0.000317376,0.000032061675,0.00015784301],"domain_scores_gemma":[0.99950355,0.000013669701,0.00010748284,0.0002972078,0.0000360546,0.00004204004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045855995,0.00011797243,0.00016861087,0.00009571505,0.000024742778,0.0000023470318,0.00010141855,0.00020960071,0.000008469119],"category_scores_gemma":[0.0001244165,0.00011984132,0.00005696295,0.00009364639,0.00017895387,0.0000024876717,0.00011818269,0.00007548853,5.9760936e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005211857,0.000047184127,0.0023715892,0.000019597806,0.000031277283,0.0000018933381,0.00003589753,0.0000014685659,0.9797478,0.00032303366,9.328187e-7,0.017367227],"study_design_scores_gemma":[0.00028676863,0.00019907573,0.029674206,0.0000055826963,0.000019841267,0.000008625126,0.000007433267,0.00004151481,0.9665687,0.002907836,0.00016421829,0.0001161921],"about_ca_topic_score_codex":0.00012318134,"about_ca_topic_score_gemma":0.000043888827,"teacher_disagreement_score":0.266167,"about_ca_system_score_codex":0.000012571983,"about_ca_system_score_gemma":0.000019245983,"threshold_uncertainty_score":0.48869872},"labels":[],"label_agreement":null},{"id":"W183831945","doi":"10.1007/978-1-59745-393-6_13","title":"Cloning, Expression, and Functional Analysis of Patient-Derived Hepatitis C Virus Glycoproteins","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Viral quasispecies; Virology; Glycoprotein; Hepatitis C virus; Virus; Biology; Infectivity; Genotype; Viral envelope; Hepatocellular carcinoma; Liver disease; Gene; Genetics","score_opus":0.08893350867567933,"score_gpt":0.4875286256948562,"score_spread":0.3985951170191769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W183831945","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046694142,0.7133801,0.28478658,0.0000065217123,0.00009465711,0.00076931994,0.00008224258,0.00001642321,0.0003972356],"genre_scores_gemma":[0.000012443638,0.6953674,0.30396637,0.00006998111,0.000025278805,0.00012787948,0.00036277593,0.00004111348,0.000026773205],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9941384,0.0030265157,0.0012531425,0.00078377384,0.0003076779,0.0004904671],"domain_scores_gemma":[0.99768317,0.00077882933,0.00046646275,0.0006848968,0.00018988638,0.00019674213],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017846309,0.00041642904,0.0032156657,0.0024515768,0.0000428748,0.000008802819,0.00016418281,0.0009104608,0.00046918434],"category_scores_gemma":[0.0020530263,0.00033985087,0.0006512059,0.0020041468,0.00037346262,0.000019427216,0.00031025,0.00080782676,0.000005805781],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054749093,0.00008784186,0.0017210182,0.0017243829,0.001406217,0.0001799952,0.000042843272,0.0000017321657,0.038695823,0.00013266047,0.000011567089,0.95594114],"study_design_scores_gemma":[0.00057790463,0.00060147495,0.00033912723,0.0026119405,0.0031055396,0.000033447002,0.0000074253785,0.000076417295,0.01770386,0.0001501466,0.974364,0.00042874325],"about_ca_topic_score_codex":0.0011743301,"about_ca_topic_score_gemma":0.00020116907,"teacher_disagreement_score":0.9743524,"about_ca_system_score_codex":0.00016059393,"about_ca_system_score_gemma":0.00030699233,"threshold_uncertainty_score":0.99990535},"labels":[],"label_agreement":null},{"id":"W183848026","doi":"10.1007/978-1-61779-797-2_1","title":"Assessing Cancer Cell Migration and Metastatic Growth In Vivo in the Chick Embryo Using Fluorescence Intravital Imaging","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"In vivo; Chorioallantoic membrane; Metastasis; Cell migration; Cancer cell; Biology; Cancer; Live cell imaging; Motility; Cell biology; Cell; Embryo; In vitro; Embryonic stem cell; Pathology; Cancer research; Medicine; Biochemistry; Genetics","score_opus":0.04004859361155632,"score_gpt":0.4255220403898949,"score_spread":0.38547344677833856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W183848026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.801054,0.010053344,0.18781781,0.00035272166,0.00018879838,0.0002999548,0.000003386354,0.0000053593612,0.0002246263],"genre_scores_gemma":[0.5580064,0.00029529413,0.44116643,0.00045023405,0.000036768837,0.000027156757,0.000003335638,0.000011625498,0.000002765517],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977744,0.001231339,0.00029982365,0.000249435,0.00007976616,0.0003652194],"domain_scores_gemma":[0.9995109,0.00018504157,0.0000820362,0.00014905448,0.000023359396,0.00004965363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021762084,0.00014586964,0.00031838915,0.00017688172,0.000026832959,0.000023626166,0.00007663589,0.000057532845,0.000024172441],"category_scores_gemma":[0.00018276785,0.000108682754,0.000041239622,0.0003629579,0.00010467005,0.00013635599,0.000045493467,0.00026370093,1.9942262e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001865866,0.000077859055,0.10427195,0.00006555588,0.000007616422,0.000031162923,0.0010697062,0.0000119001215,0.8716282,0.00016887701,0.0000022013792,0.022646312],"study_design_scores_gemma":[0.0024496678,0.00009066178,0.06756645,0.00028503075,0.00023560095,0.00021928755,0.0039017927,0.006619016,0.91622317,0.0015364514,0.0004486246,0.00042427948],"about_ca_topic_score_codex":0.005258305,"about_ca_topic_score_gemma":0.00056128384,"teacher_disagreement_score":0.25334862,"about_ca_system_score_codex":0.00012791349,"about_ca_system_score_gemma":0.000073054456,"threshold_uncertainty_score":0.7949019},"labels":[],"label_agreement":null},{"id":"W185331197","doi":"10.1007/978-1-60327-009-0_17","title":"Animal Cloning by Somatic Cell Nuclear Transfer","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Somatic cell nuclear transfer; Cloning (programming); Somatic cell; Biology; Computational biology; Damages; Computer science; Cell biology; Genetics; Embryo; Embryogenesis; Political science; Gene","score_opus":0.020244495686000934,"score_gpt":0.3819847944435577,"score_spread":0.36174029875755676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W185331197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70617896,0.0011863095,0.28628775,0.0012783915,0.00008913424,0.00027570815,0.0000028726645,0.000048947622,0.004651916],"genre_scores_gemma":[0.6466202,0.000020880925,0.3512027,0.0020087766,0.000030523828,0.000005913822,0.000017399041,0.000011342796,0.00008223044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99796546,0.0009535106,0.00028727265,0.00045836787,0.000040287596,0.00029510038],"domain_scores_gemma":[0.9994545,0.00006903582,0.000025959796,0.00034819345,0.00003852221,0.0000638078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010725796,0.00014761319,0.00038125008,0.00008082602,0.000035628294,0.0000033234448,0.00010539046,0.00028628856,0.00014302433],"category_scores_gemma":[0.000385684,0.0001226123,0.000099350844,0.00015677811,0.00014633467,0.000016870852,0.00001772795,0.00033113122,0.00002314496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00063674647,0.00017665757,0.0029156166,0.000014867168,0.00001605035,0.000027283193,0.00012860919,3.4986365e-7,0.9854384,0.00064105785,0.00006454226,0.009939804],"study_design_scores_gemma":[0.0011744761,0.0016731037,0.052447703,0.000016337062,0.000050303697,0.000053830332,0.000046207082,0.00013178487,0.93072987,0.005427779,0.008047842,0.00020074798],"about_ca_topic_score_codex":0.000007648235,"about_ca_topic_score_gemma":1.829858e-7,"teacher_disagreement_score":0.06491495,"about_ca_system_score_codex":0.000031789295,"about_ca_system_score_gemma":0.000022287464,"threshold_uncertainty_score":0.49999842},"labels":[],"label_agreement":null},{"id":"W18558254","doi":"10.1007/978-1-62703-511-8_11","title":"Route of Delivery, Cell Retention, and Efficiency of Polymeric Microcapsules in Cellular Cardiomyoplasty","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrospun Nanofibers in Biomedical Applications","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Biocompatible material; Transplantation; Cell; Stem cell; Regenerative medicine; Regeneration (biology); Biomedical engineering; Materials science; Medicine; Chemistry; Surgery; Cell biology; Biology","score_opus":0.007075920460110099,"score_gpt":0.2903471094180378,"score_spread":0.28327118895792774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W18558254","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57772475,0.0015311989,0.42035112,0.000040320137,0.000047607606,0.00017375783,0.0000062328095,0.0000058760343,0.000119109],"genre_scores_gemma":[0.4416684,0.00006410805,0.5581717,0.000028930835,0.000004309832,0.000038820122,0.0000052137807,0.000006708439,0.000011825548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808997,0.00070686947,0.00050461444,0.00034507795,0.00008425003,0.00026919928],"domain_scores_gemma":[0.9992354,0.00018648677,0.00018012691,0.00028966492,0.00006402039,0.00004431884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009889007,0.000118513526,0.0003650974,0.00021577987,0.000018565092,0.000005119834,0.00026709246,0.00016107346,0.000052238775],"category_scores_gemma":[0.00007154111,0.00010666381,0.00005237443,0.00052345096,0.0005149263,0.000025929134,0.00014606434,0.000093728486,0.000004658307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005186494,0.00006118528,0.0028319273,0.0000378143,0.0000031586042,0.0000012305001,0.00006256023,0.0000036351648,0.9938256,0.0006684572,0.0000046035652,0.0024946],"study_design_scores_gemma":[0.00028296243,0.0001006704,0.0017801798,0.000011980176,0.000008958565,0.000003180707,0.000028620247,0.00012196771,0.992862,0.0046392665,0.000064303335,0.00009594527],"about_ca_topic_score_codex":0.0005817377,"about_ca_topic_score_gemma":0.0000053061685,"teacher_disagreement_score":0.13782059,"about_ca_system_score_codex":0.000026767213,"about_ca_system_score_gemma":0.00004207805,"threshold_uncertainty_score":0.43496236},"labels":[],"label_agreement":null},{"id":"W186023911","doi":"10.1007/978-1-59745-561-9_33","title":"Tumor-Targeted Salmonella typhimurium Overexpressing Cytosine Deaminase: A Novel, Tumor-Selective Therapy","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Celator Pharmaceuticals (Canada)","funders":"","keywords":"Cytosine deaminase; Salmonella; Cancer research; Escherichia coli; Cytidine deaminase; Chemistry; Microbiology; Biology; Genetic enhancement; Bacteria; Biochemistry; Enzyme; Gene; Genetics","score_opus":0.021008895663440958,"score_gpt":0.39583215813367684,"score_spread":0.3748232624702359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W186023911","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59062034,0.011023012,0.3949307,0.00022766176,0.00016138179,0.000739533,0.00005483543,0.000042920616,0.0021995886],"genre_scores_gemma":[0.7238679,0.0002508863,0.27377167,0.0015171419,0.00014347621,0.00009268498,0.00019001238,0.00004839855,0.00011782897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729604,0.00073386956,0.00033271717,0.0007964878,0.00012837758,0.0007125146],"domain_scores_gemma":[0.9990288,0.00005169706,0.00012563478,0.0005389166,0.000109777815,0.00014516254],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00058014435,0.00034708553,0.00039231233,0.0001873821,0.00008821725,0.000031349766,0.0003331154,0.0002038282,0.000026735523],"category_scores_gemma":[0.0003302501,0.00031740064,0.00016324662,0.00037960938,0.00015737649,0.000005619851,0.00011381836,0.00027469592,0.000005292397],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005638354,0.00031259595,0.0012992403,0.000004838619,0.000093231676,0.0000894589,0.000026512622,0.000039833547,0.97939265,0.00019604225,0.0001301887,0.017851578],"study_design_scores_gemma":[0.0023161564,0.001475256,0.004481097,0.000019109839,0.000010824179,0.0000871387,0.000014865689,0.000084697014,0.9794616,0.0023044809,0.009403493,0.00034129331],"about_ca_topic_score_codex":0.00015644565,"about_ca_topic_score_gemma":0.000027710115,"teacher_disagreement_score":0.13324754,"about_ca_system_score_codex":0.000084632,"about_ca_system_score_gemma":0.0001758497,"threshold_uncertainty_score":0.9999278},"labels":[],"label_agreement":null},{"id":"W186368040","doi":"10.1007/978-1-61779-551-0_32","title":"Biochemical Isolation of Insoluble Tau in Transgenic Mouse Models of Tauopathies","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research; Alzheimer Society","keywords":"Tauopathy; Tau protein; Genetically modified mouse; Neuroscience; Transgene; Biology; Isolation (microbiology); Tau pathology; Disease; Cell biology; Neurodegeneration; Biochemistry; Alzheimer's disease; Pathology; Medicine; Bioinformatics","score_opus":0.1270755444317611,"score_gpt":0.48225492547408433,"score_spread":0.3551793810423232,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W186368040","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00068049564,0.91243124,0.08577844,0.000006654382,0.000034037483,0.00086401997,0.000055014047,0.0000078663,0.00014225623],"genre_scores_gemma":[0.0014565117,0.7821056,0.21597736,0.0000068714626,0.000014695431,0.00013685538,0.0002605078,0.000035712557,0.000005877478],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965263,0.0017278114,0.0008554156,0.0003610215,0.00013835644,0.000391069],"domain_scores_gemma":[0.9988717,0.0002375098,0.00024892137,0.00044546518,0.000068168716,0.00012822854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010316153,0.00029463117,0.0019720301,0.0006521111,0.000007596987,0.0000014870708,0.00016888065,0.0006201972,0.000028402168],"category_scores_gemma":[0.0001749187,0.0002316541,0.00044779203,0.00052958826,0.00022570981,0.000028675999,0.00007584639,0.00040574739,0.0000026565674],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004539405,0.0026388925,0.0010445019,0.027528016,0.0070325118,0.000073198986,0.00024291585,0.000012463009,0.04461547,0.0024880904,0.0000069214143,0.91386306],"study_design_scores_gemma":[0.036393695,0.010530447,0.00042416813,0.06683394,0.052122086,0.00049448287,0.00035349702,0.0033006293,0.6719284,0.051972102,0.09896069,0.0066858768],"about_ca_topic_score_codex":0.00009115898,"about_ca_topic_score_gemma":0.0000032207108,"teacher_disagreement_score":0.9071772,"about_ca_system_score_codex":0.00009765124,"about_ca_system_score_gemma":0.00034875877,"threshold_uncertainty_score":0.94465804},"labels":[],"label_agreement":null},{"id":"W186480746","doi":"10.1007/978-1-59745-181-9_7","title":"Detection of New Viruses by VIDISCA","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biology; Genome; Restriction enzyme; Amplified fragment length polymorphism; DNA; RNA; Oligonucleotide; Complementary DNA; Virology; Restriction fragment length polymorphism; Computational biology; Genetics; Molecular biology; Polymerase chain reaction; Gene","score_opus":0.06547556424639081,"score_gpt":0.3709229131397968,"score_spread":0.30544734889340597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W186480746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8153265,0.0012908278,0.18224093,0.000104817016,0.000104672785,0.00009924773,0.000008286387,0.00003254685,0.00079217344],"genre_scores_gemma":[0.85455763,0.00031360428,0.14456409,0.00032387007,0.000067720255,0.000020537376,0.0000057935717,0.0000015344796,0.00014521102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990127,0.00038661735,0.00019640855,0.00020115681,0.0000407436,0.00016235223],"domain_scores_gemma":[0.9996562,0.00017659662,0.00006922347,0.000042811007,0.000024759165,0.00003041758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025060456,0.000092715614,0.00019091101,0.000020024672,0.0000812673,0.0000020135124,0.00011532542,0.00011280273,0.000069105285],"category_scores_gemma":[0.0002491647,0.000039299957,0.00007101598,0.00033758394,0.00014759562,0.00001959769,0.000071435694,0.00009063842,0.0000066512484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013771124,0.000028692562,0.00952467,7.424038e-7,0.000007578228,0.0000012815734,0.000028320594,0.0000015350698,0.93125623,0.00013676567,0.000084851745,0.058915567],"study_design_scores_gemma":[0.000086352506,0.00035100087,0.017108474,0.0000025682925,0.000004896273,0.00001144081,0.00004077923,0.000008197245,0.95284224,0.0024207127,0.02702215,0.00010118989],"about_ca_topic_score_codex":0.0012073294,"about_ca_topic_score_gemma":0.00029295034,"teacher_disagreement_score":0.058814377,"about_ca_system_score_codex":0.000016886075,"about_ca_system_score_gemma":0.0000051016036,"threshold_uncertainty_score":0.1825129},"labels":[],"label_agreement":null},{"id":"W186723605","doi":"10.1007/978-1-61779-433-9_28","title":"Bioseparation of Recombinant Proteins from Plant Extract with Hydrophobin Fusion Technology","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Hydrophobin; Chromatography; Fusion protein; Chemistry; Protein purification; Downstream processing; Tandem affinity purification; Aqueous solution; Fusion; Recombinant DNA; Affinity chromatography; Biochemistry; Organic chemistry; Enzyme","score_opus":0.02313716622752143,"score_gpt":0.3275260427791781,"score_spread":0.30438887655165664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W186723605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5028349,0.00035552727,0.49603608,0.000057977508,0.000056793942,0.00028305926,0.0000442716,0.000011347215,0.00031999502],"genre_scores_gemma":[0.50556684,0.000112950365,0.4939443,0.000044552937,0.0000102962385,0.0000938262,0.0001876783,0.000014102799,0.000025472063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875337,0.00024272759,0.00030837875,0.0004319385,0.000044078002,0.00021952871],"domain_scores_gemma":[0.9993196,0.000018254525,0.00014322411,0.00044490627,0.000037053942,0.000036944544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028864454,0.0001625113,0.0002446278,0.00014041414,0.00002952809,0.0000024793076,0.00025475654,0.0003359235,0.000034293058],"category_scores_gemma":[0.00003951112,0.00012962903,0.000051478833,0.0002175882,0.0001738282,0.0000022091976,0.00006490142,0.00013481587,0.000002602999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016611197,0.0001602107,0.0030458951,0.0000048836127,0.00003756988,0.000008373074,0.000038443137,0.0000034810028,0.9846722,0.0014170948,0.0000062961644,0.010439428],"study_design_scores_gemma":[0.0005510227,0.0006139378,0.0018314602,0.00001936583,0.000018672965,0.000021550723,0.000026167425,0.00006146834,0.9882736,0.004596887,0.0038120525,0.00017377717],"about_ca_topic_score_codex":0.00018851866,"about_ca_topic_score_gemma":0.00012694478,"teacher_disagreement_score":0.01026565,"about_ca_system_score_codex":0.0000087084145,"about_ca_system_score_gemma":0.00005562082,"threshold_uncertainty_score":0.52861184},"labels":[],"label_agreement":null},{"id":"W187179976","doi":"10.1007/978-1-61779-120-8_21","title":"Evaluation of the Disease Liability of CFTR Variants","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Heart, Lung, and Blood Institute; Cystic Fibrosis Foundation","keywords":"In silico; Mutation; Disease; Genetics; Computational biology; Gene; Biology; Bioinformatics; Medicine; Internal medicine","score_opus":0.10582549549082897,"score_gpt":0.49750124082272684,"score_spread":0.39167574533189786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W187179976","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5541481,0.001292426,0.44099453,0.0001517382,0.00015941096,0.00083989947,0.000014423123,0.0000059477093,0.0023935332],"genre_scores_gemma":[0.50019956,0.000005701234,0.4997246,0.000025059178,0.000004716499,0.000026489271,0.0000019213878,0.000004334174,0.000007638448],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9958164,0.003333698,0.0002716806,0.00018352829,0.0002586439,0.00013602132],"domain_scores_gemma":[0.9987893,0.0002279809,0.000094151415,0.00052449084,0.00031271094,0.000051378156],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0058190073,0.00006268166,0.00022192988,0.00007176612,0.000008813306,4.9164987e-7,0.00014808182,0.00005608425,0.00017763292],"category_scores_gemma":[0.01535719,0.000040401883,0.00007916925,0.00024812703,0.00033803924,0.00001135221,0.00010060092,0.00010727644,7.1550295e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002264561,0.0001948963,0.05601832,0.00007208829,0.00003362046,0.0000022520167,0.00010548535,0.000014374251,0.89509696,0.0018386432,0.0000019425706,0.046394993],"study_design_scores_gemma":[0.0007270748,0.00019379961,0.49048308,0.000051786483,0.00012684676,0.0000020946172,0.0000226018,0.0018361831,0.42490387,0.08154861,0.00006230685,0.000041736323],"about_ca_topic_score_codex":0.0000753684,"about_ca_topic_score_gemma":0.0000054692414,"teacher_disagreement_score":0.47019306,"about_ca_system_score_codex":0.00004510171,"about_ca_system_score_gemma":0.00025177296,"threshold_uncertainty_score":0.99293685},"labels":[],"label_agreement":null},{"id":"W1882164115","doi":"10.1007/978-1-59745-583-1_18","title":"Fluorescent In Situ Hybridization Protocols in Drosophila Embryos and Tissues","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":123,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"In situ hybridization; RNA; Biology; In situ; Molecular biology; Cell biology; Computational biology; Messenger RNA; Gene; Chemistry; Genetics","score_opus":0.0311731637588023,"score_gpt":0.41092918579988486,"score_spread":0.37975602204108255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1882164115","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9331327,0.0008286734,0.06313605,0.00014337545,0.000025683816,0.002457219,0.000002041805,0.000006256828,0.000268014],"genre_scores_gemma":[0.71099037,0.00067086914,0.28519768,0.0003430982,0.00006838213,0.0024094114,0.00008020135,0.000039976872,0.00020001807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978004,0.00096459355,0.00031850077,0.00046656476,0.000070111084,0.00037980342],"domain_scores_gemma":[0.9995534,0.00003314492,0.000049041148,0.00026708678,0.0000320049,0.000065358465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009051714,0.00015320341,0.00025492784,0.00022561173,0.000029916733,0.000008697872,0.00016717572,0.00021693473,0.0000039637484],"category_scores_gemma":[0.0005387871,0.00015050948,0.00003491617,0.00024447823,0.00015478741,0.000003775036,0.00016622362,0.00019729135,0.0000014656002],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083941995,0.00006632963,0.05167906,0.000019397821,0.0000053539543,0.00010621823,0.00004637385,0.000051006104,0.94225156,0.00020109571,0.000012277374,0.005477389],"study_design_scores_gemma":[0.0011870884,0.00032169334,0.023285458,0.000040335086,0.0000012028819,0.00005085227,0.000021789221,0.00032877602,0.97214305,0.0008298168,0.0015914743,0.00019847568],"about_ca_topic_score_codex":0.0001049916,"about_ca_topic_score_gemma":0.0001528375,"teacher_disagreement_score":0.22214231,"about_ca_system_score_codex":0.000029984774,"about_ca_system_score_gemma":0.00006654782,"threshold_uncertainty_score":0.6137599},"labels":[],"label_agreement":null},{"id":"W188417689","doi":"10.1007/978-1-62703-733-4_12","title":"Monitoring Cell Growth, Viability, and Apoptosis","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Bioprocess; Cell counting; Viability assay; Biological system; Process engineering; Biomedical engineering; Biology; Cell; Cell cycle; Engineering; Biochemistry","score_opus":0.012260361360729334,"score_gpt":0.34397682483800296,"score_spread":0.3317164634772736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W188417689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83354205,0.0015974127,0.1624033,0.00009878135,0.00033563722,0.00026943875,0.000003107969,0.000017014565,0.0017332323],"genre_scores_gemma":[0.76808864,0.00025911312,0.23102051,0.00021170129,0.000100996665,0.00016699251,0.000009074424,0.000023114335,0.000119847486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828464,0.00061324437,0.00024018,0.00050292717,0.00004748106,0.00031153514],"domain_scores_gemma":[0.99937385,0.00004671302,0.00006101031,0.00033153695,0.00007449335,0.00011237802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034602973,0.00018677069,0.00019464585,0.00007972449,0.00005934992,0.000027658478,0.00016840528,0.00026064046,0.000044718137],"category_scores_gemma":[0.0002628464,0.0001721057,0.00008680097,0.00011668567,0.00013122632,0.0000043717173,0.0002819064,0.00012979325,0.0000088143315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009724065,0.00005439529,0.050045382,0.000022433604,0.000013155001,7.348446e-7,0.000015425312,0.000009168632,0.9431276,0.00009461884,0.00012656076,0.0064808507],"study_design_scores_gemma":[0.00033157744,0.00023514825,0.0039798096,0.0000087580975,0.0000084560825,0.0000044966114,0.00003608892,0.00002651078,0.9860075,0.00811425,0.001036894,0.00021052433],"about_ca_topic_score_codex":0.00017440892,"about_ca_topic_score_gemma":0.0000016324441,"teacher_disagreement_score":0.0686172,"about_ca_system_score_codex":0.000012336256,"about_ca_system_score_gemma":0.00002141938,"threshold_uncertainty_score":0.7018267},"labels":[],"label_agreement":null},{"id":"W188659821","doi":"10.1007/978-1-4939-2020-4_15","title":"Synthesis and Cell-Based Screening of One-Bead-One-Compound Peptide Libraries","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Peptidomimetic; Peptide; Peptide library; Combinatorial chemistry; Chemistry; Bead; Proteases; High-throughput screening; Small molecule; Solid-phase synthesis; Biochemistry; Computational biology; Peptide sequence; Biology; Enzyme; Materials science","score_opus":0.04308270863383053,"score_gpt":0.3713970532328601,"score_spread":0.3283143445990296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W188659821","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001799643,0.65277624,0.34637865,0.00002228311,0.00002640313,0.0001919041,0.00003315711,0.000008440898,0.00038296776],"genre_scores_gemma":[0.00021408194,0.54142463,0.4578401,0.00008195196,0.00007749778,0.0000906657,0.00017018875,0.00006520696,0.000035667945],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9952208,0.0023125326,0.0009638202,0.0009578713,0.00011379,0.0004312317],"domain_scores_gemma":[0.9975571,0.00090166583,0.00057716406,0.00079346483,0.000051661937,0.00011891215],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013560066,0.000539532,0.0024768573,0.0002809361,0.000048132555,0.00003094507,0.0005552132,0.0010170067,0.00003868203],"category_scores_gemma":[0.0011726206,0.0004895216,0.0007908025,0.00029695535,0.00042485437,0.0000026465887,0.0003813493,0.0003230062,0.0000018261933],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025930729,0.00012222661,0.00009298846,0.0043890188,0.00042712782,0.0000046822447,0.000004506638,0.000007208268,0.36934873,0.00019113952,0.000019559084,0.62536687],"study_design_scores_gemma":[0.00020657637,0.00010829861,0.000003977673,0.0018011967,0.0009468434,0.000005864539,0.0000061356927,0.00003329645,0.5567336,0.0003826385,0.43917632,0.0005952215],"about_ca_topic_score_codex":0.00003978373,"about_ca_topic_score_gemma":0.000006171012,"teacher_disagreement_score":0.62477165,"about_ca_system_score_codex":0.000016572605,"about_ca_system_score_gemma":0.000120162236,"threshold_uncertainty_score":0.9997556},"labels":[],"label_agreement":null},{"id":"W1888578572","doi":"10.1007/978-1-4939-3124-8_8","title":"Microtubules in Plant Cells: Strategies and Methods for Immunofluorescence, Transmission Electron Microscopy, and Live Cell Imaging","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Microtubule; Immunofluorescence; Live cell imaging; Plant cell; Transmission electron microscopy; Cell biology; Indirect immunofluorescence; Biophysics; Electron tomography; Tubulin; Biology; Cell; Nanotechnology; Materials science; Biochemistry; Antibody; Scanning transmission electron microscopy","score_opus":0.013840214832378102,"score_gpt":0.3764553751583934,"score_spread":0.36261516032601526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1888578572","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34905386,0.03359891,0.6165226,0.00009529407,0.00013321656,0.0004857387,0.00002418709,0.000009435921,0.000076719945],"genre_scores_gemma":[0.029666647,0.0015412475,0.9682953,0.00014324827,0.000044424974,0.0000987941,0.00015195094,0.00003121396,0.000027195021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964872,0.0017037068,0.00036280736,0.0009048758,0.000031574065,0.000509841],"domain_scores_gemma":[0.9992933,0.00015457209,0.00010841033,0.0002852966,0.00006429989,0.00009410065],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0023193252,0.00029720398,0.0004222402,0.000188177,0.000039625666,0.00003120265,0.00021266333,0.0003320949,0.0000011830756],"category_scores_gemma":[0.00020815768,0.0002717921,0.00005574356,0.0001070167,0.00032174904,0.000009396916,0.00015716003,0.00022045894,3.772999e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041441075,0.00005241154,0.0016118331,0.000042893782,0.000018891824,0.00000834414,0.00019177502,0.000009803969,0.9802058,0.00018236546,0.00003086923,0.0172306],"study_design_scores_gemma":[0.0010900114,0.0005101006,0.00030607163,0.000019909576,0.000016498014,0.00007981448,0.00039522318,0.00022215604,0.97853,0.0040838835,0.01443686,0.00030947602],"about_ca_topic_score_codex":0.00013344522,"about_ca_topic_score_gemma":0.000023226847,"teacher_disagreement_score":0.35177264,"about_ca_system_score_codex":0.000031733645,"about_ca_system_score_gemma":0.00016051724,"threshold_uncertainty_score":0.9999734},"labels":[],"label_agreement":null},{"id":"W189256366","doi":"10.1007/978-1-4939-2428-8_16","title":"Randomized Controlled Trials: Planning, Monitoring, and Execution","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Health Sciences Centre; Memorial University of Newfoundland","funders":"","keywords":"Multidisciplinary approach; Accountability; Process management; Plan (archaeology); Corporate governance; Business; Multidisciplinary team; Knowledge management; Finance; Computer science; Political science; Medicine; Nursing","score_opus":0.3397124197963144,"score_gpt":0.6136555150278394,"score_spread":0.27394309523152505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W189256366","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06800072,0.022387372,0.8959255,0.0057702763,0.00066230766,0.0029034815,0.0000013571321,0.000043670378,0.0043052677],"genre_scores_gemma":[0.056307252,0.0013132669,0.93787706,0.002966426,0.00045054694,0.00060009764,0.000016435617,0.000027282933,0.0004416254],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.9850816,0.013046034,0.0008433697,0.00024387479,0.00021198895,0.000573104],"domain_scores_gemma":[0.98775494,0.008533986,0.00026674764,0.000279116,0.00018377628,0.002981443],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.072312,0.00013656875,0.0026981258,0.00028214703,0.000018998551,0.000008800733,0.000055918357,0.00026389692,0.000017033062],"category_scores_gemma":[0.5612306,0.00008062444,0.00018786495,0.00014297312,0.00024203194,0.000015315924,0.000041343214,0.00038423415,0.000002980343],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.61515176,0.0002322833,0.0060735666,0.00017356146,0.000593377,0.0005709191,0.001064086,0.000006856667,0.21796185,0.003994743,0.0012897606,0.15288724],"study_design_scores_gemma":[0.9458142,0.00090806163,0.0001450411,0.00022062489,0.00022096935,0.00007146697,0.00020537134,0.0010069937,0.023622341,0.012549121,0.015089913,0.00014592943],"about_ca_topic_score_codex":0.00007484838,"about_ca_topic_score_gemma":2.1908212e-7,"teacher_disagreement_score":0.4889186,"about_ca_system_score_codex":0.00008437095,"about_ca_system_score_gemma":0.0010309935,"threshold_uncertainty_score":0.95525},"labels":[],"label_agreement":null},{"id":"W189326263","doi":"10.1007/978-1-59745-419-3_4","title":"The Spot Technique: Synthesis and Screening of Peptide Macroarrays on Cellulose Membranes","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surrey Memorial Hospital; University of British Columbia","funders":"","keywords":"Peptide; Combinatorial chemistry; Cellulose; Membrane; Peptide synthesis; Computer science; Nanotechnology; Chemistry; Materials science; Biochemistry","score_opus":0.022189429403006687,"score_gpt":0.3555601312255879,"score_spread":0.3333707018225812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W189326263","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1071096,0.0008275288,0.89091593,0.00021671107,0.000021048707,0.0002914612,0.0000073976425,0.000019405623,0.0005908914],"genre_scores_gemma":[0.2524084,0.0008559347,0.7463934,0.000111412,0.000020311658,0.000100984005,0.000008683668,0.000018519302,0.00008240378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987403,0.00039493915,0.0002543608,0.0003455912,0.00004861832,0.00021619332],"domain_scores_gemma":[0.99916786,0.00019002291,0.00011236872,0.00044935552,0.000044366778,0.000036033343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006536697,0.00015219099,0.00019500224,0.00006147165,0.000114606184,0.000004033611,0.00020765193,0.00019702253,0.0000016857088],"category_scores_gemma":[0.00041183125,0.0001146982,0.00007355458,0.00013226268,0.00048064228,0.0000011952948,0.00013531503,0.00013219034,3.243895e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004797484,0.000022588021,0.00020816019,0.000007417407,0.000013975677,0.000004846514,0.000009279101,0.000012346018,0.97898597,0.001900163,0.000031978216,0.018755298],"study_design_scores_gemma":[0.000095138756,0.00013734125,0.00015394115,0.000015991254,0.00000731637,0.00005625692,0.000015465384,0.000047788137,0.9822684,0.0023314331,0.014741611,0.00012935224],"about_ca_topic_score_codex":0.000018382461,"about_ca_topic_score_gemma":0.000004173473,"teacher_disagreement_score":0.14529878,"about_ca_system_score_codex":0.000006406082,"about_ca_system_score_gemma":0.000018247856,"threshold_uncertainty_score":0.46772572},"labels":[],"label_agreement":null},{"id":"W189796043","doi":"10.1007/978-1-59745-060-7_7","title":"Ex Vivo Megakaryocyte Expansion and Platelet Production from Human Cord Blood Stem Cells","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Héma-Québec","funders":"","keywords":"Thrombopoiesis; Thrombopoietin; Ex vivo; Cord blood; Megakaryocyte; Stem cell; Haematopoiesis; Platelet; Cell biology; CD34; Biology; Immunology; Progenitor cell; In vivo; Biotechnology","score_opus":0.033353838283234974,"score_gpt":0.3548895824506812,"score_spread":0.32153574416744624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W189796043","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9776307,0.0019103201,0.01942905,0.0001160236,0.00021173818,0.00039123965,0.000009035359,0.000038905262,0.00026299615],"genre_scores_gemma":[0.5651206,0.00082727516,0.43308216,0.00031895872,0.00006222299,0.00003765603,0.00007219652,0.00003735642,0.00044161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846685,0.00042553793,0.00027475745,0.00051261653,0.00007344567,0.00024676413],"domain_scores_gemma":[0.99944985,0.00006374238,0.000079319514,0.00030153344,0.000029262908,0.00007629621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026202196,0.00019175366,0.00047702016,0.00014051702,0.0000746739,0.000003919589,0.00005832644,0.00021377139,0.0000357117],"category_scores_gemma":[0.000035749406,0.0001622113,0.000057456025,0.0001427574,0.0001411518,0.000025945423,0.000055037606,0.00018774778,0.000005451293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015481071,0.00023550433,0.006575402,0.000013184541,0.000117498035,0.00147832,0.00015865863,0.0000022809265,0.973493,0.00004184801,0.00003944884,0.017690059],"study_design_scores_gemma":[0.0024440438,0.0006622826,0.0023949512,0.000032369084,0.00009200252,0.00048065482,0.000045295095,0.000029387542,0.9910691,0.0014236541,0.0011681942,0.00015811098],"about_ca_topic_score_codex":0.00022944839,"about_ca_topic_score_gemma":0.0000142485305,"teacher_disagreement_score":0.4136531,"about_ca_system_score_codex":0.000025225087,"about_ca_system_score_gemma":0.000025672878,"threshold_uncertainty_score":0.6614785},"labels":[],"label_agreement":null},{"id":"W189928598","doi":"10.1007/978-1-62703-128-8_13","title":"Ex Vivo Differentiation of Cord Blood Stem Cells into Megakaryocytes and Platelets","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Héma-Québec","funders":"","keywords":"Platelet; Haematopoiesis; Cord blood; Progenitor cell; Stem cell; Cell biology; Immunology; Thrombopoiesis; Flow cytometry; Megakaryocyte; Ex vivo; Bone marrow; Biology; Cytokine; In vivo; Molecular biology; Biotechnology","score_opus":0.02066523069969389,"score_gpt":0.3566779106924766,"score_spread":0.3360126799927827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W189928598","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9268812,0.0037706345,0.06870914,0.000039145125,0.0001257935,0.00021416483,0.0000039696342,0.000011204726,0.000244738],"genre_scores_gemma":[0.7645915,0.00021839977,0.23501974,0.00008177226,0.000011256109,0.000011002295,0.0000119695915,0.000011755516,0.000042612137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898267,0.00032895347,0.00023377502,0.0001827451,0.000051073526,0.00022078914],"domain_scores_gemma":[0.9995203,0.000135726,0.00008661624,0.00016360039,0.000022807633,0.000070954775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032275534,0.00013068828,0.00041032452,0.0001302008,0.00001595931,0.0000024536039,0.000043474185,0.0001604333,0.00002779976],"category_scores_gemma":[0.000039930386,0.00010465225,0.000049842507,0.00010707096,0.000074282245,0.00002405086,0.000050797105,0.0000944082,0.0000019017323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009545958,0.00028304476,0.059139717,0.00005444975,0.00014398269,0.000043923024,0.00018296731,3.812998e-7,0.9037201,0.00051207066,0.0000034277336,0.035820503],"study_design_scores_gemma":[0.0017528314,0.00043000936,0.00788383,0.000025254089,0.0001518037,0.00006561617,0.000047191654,0.00005589511,0.98777515,0.0014391154,0.00027717632,0.0000961402],"about_ca_topic_score_codex":0.00005790641,"about_ca_topic_score_gemma":0.0000039827405,"teacher_disagreement_score":0.16631061,"about_ca_system_score_codex":0.000015033792,"about_ca_system_score_gemma":0.000011737016,"threshold_uncertainty_score":0.42675948},"labels":[],"label_agreement":null},{"id":"W1909114057","doi":"10.1007/978-1-61779-430-8_10","title":"Evaluation of mTOR-Regulated mRNA Translation","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Cancer Research UK","keywords":"Polysome; Protein biosynthesis; Translation (biology); PI3K/AKT/mTOR pathway; Ribosome; Messenger RNA; Amino acid; Phosphorylation; Biology; Biochemistry; EIF4E; Chemistry; Cell biology; RNA; Signal transduction; Gene","score_opus":0.0961493710559215,"score_gpt":0.42767528922293596,"score_spread":0.3315259181670145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1909114057","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41849178,0.0031809881,0.57415867,0.00002083256,0.0003172732,0.0003209929,0.000008602076,0.000011703836,0.0034891595],"genre_scores_gemma":[0.5846517,0.00003279118,0.41507012,0.000067852015,0.000039218507,0.000049296585,0.000053359283,0.000022310734,0.00001332351],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966725,0.0020855314,0.00040285755,0.00041993152,0.00017814944,0.00024099708],"domain_scores_gemma":[0.9990369,0.00003220097,0.00016305367,0.00044200887,0.00028456587,0.000041234416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0040377174,0.00016652411,0.0002364417,0.00013519563,0.000019147537,0.000002703635,0.00024101773,0.00037055244,0.00012840651],"category_scores_gemma":[0.00043776823,0.00016864142,0.000111042384,0.00021577782,0.00015436712,0.0000028234344,0.00004962156,0.00011037421,0.0000021086596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007124292,0.000051522773,0.0012414235,0.000007923681,0.00007410659,0.0000010328592,0.00010971888,0.00025254735,0.9214978,0.00030487374,0.000009751775,0.07637804],"study_design_scores_gemma":[0.00087378046,0.0003151378,0.0012962937,0.0000134625325,0.00008843202,0.000005454528,0.000016180575,0.0016348865,0.9867226,0.00783307,0.0010181936,0.00018254308],"about_ca_topic_score_codex":0.00006459978,"about_ca_topic_score_gemma":0.000022568856,"teacher_disagreement_score":0.16615996,"about_ca_system_score_codex":0.000037098183,"about_ca_system_score_gemma":0.00014349271,"threshold_uncertainty_score":0.6876998},"labels":[],"label_agreement":null},{"id":"W191409454","doi":"10.1007/978-1-62703-383-1_4","title":"Fluorescent Biosensors for the Detection of HMGB1 Release","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Glycation End Products research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National Du Cancer; Ligue Contre le Cancer; Institute of Cancer Research; Fondation pour la Recherche Médicale","keywords":"HMGB1; Programmed cell death; Extracellular; Cell biology; Immune system; Transfection; Cell; Green fluorescent protein; Biology; Apoptosis; Immunogenic cell death; Cancer cell; In vivo; Chemistry; Cell culture; Biochemistry; Cancer; Receptor; Immunology","score_opus":0.024600849990987047,"score_gpt":0.4053235805229688,"score_spread":0.38072273053198175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W191409454","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08065624,0.0018504906,0.9160726,0.0004905094,0.00012467064,0.0007400031,0.000004454646,0.0000039356896,0.000057084813],"genre_scores_gemma":[0.54984313,0.00037559704,0.44900337,0.00018652582,0.00005779879,0.00036690934,0.000024120733,0.000022834405,0.00011970335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985553,0.0005715185,0.00025933055,0.00031864387,0.00004731738,0.0002479083],"domain_scores_gemma":[0.999206,0.00015296908,0.0000724894,0.000418067,0.00012119008,0.000029298226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008123326,0.000100073135,0.00014048298,0.00010679621,0.000026002583,0.000004103988,0.00021292367,0.00014475315,0.000009973775],"category_scores_gemma":[0.001689006,0.00007587001,0.00006407327,0.00021809028,0.00015345718,0.0000021670735,0.00008271237,0.0001165622,0.0000014550092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005404982,0.00002770357,0.0003766337,0.000013259096,0.000012017903,3.4869765e-7,0.000013584601,0.00031306193,0.8975886,0.00028358202,0.000009837159,0.101307325],"study_design_scores_gemma":[0.00038232477,0.00017542615,0.0011767106,0.000004013868,0.0000035229855,0.0000030077272,0.00004559618,0.0007840165,0.98646206,0.0023593798,0.00851914,0.00008481681],"about_ca_topic_score_codex":0.00008532158,"about_ca_topic_score_gemma":0.00002346452,"teacher_disagreement_score":0.4691869,"about_ca_system_score_codex":0.000017726921,"about_ca_system_score_gemma":0.000033571254,"threshold_uncertainty_score":0.30938894},"labels":[],"label_agreement":null},{"id":"W1918427127","doi":"10.1007/978-1-4939-1658-0_25","title":"Hemp (Cannabis sativa L.)","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Callus; Transformation (genetics); Plasmid; Agrobacterium tumefaciens; Selectable marker; Biology; Molecular biology; Acetosyringone; Gene; genomic DNA; Southern blot; Genetics","score_opus":0.014325141586341641,"score_gpt":0.3526009183716169,"score_spread":0.33827577678527526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1918427127","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.048723575,0.0013904587,0.9447954,0.0007288638,0.0002589617,0.00013388532,0.00000486498,0.000015237712,0.00394871],"genre_scores_gemma":[0.13612795,0.00011873592,0.85840017,0.001949549,0.0004262268,0.0000741336,0.0003829952,0.00003894375,0.0024813092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982975,0.00082051277,0.00020229531,0.00039299054,0.00004061472,0.00024607553],"domain_scores_gemma":[0.9994998,0.000017339013,0.00005780788,0.0003329289,0.00003838451,0.000053717715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006333318,0.00015306007,0.00018853064,0.000062480685,0.000040110885,0.0000089697,0.00019157155,0.00029111258,0.000018143144],"category_scores_gemma":[0.00041914007,0.00012950375,0.00007200445,0.00010585276,0.00008922969,0.0000014665147,0.00008244035,0.00010750126,0.000009099635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015001898,0.000020097454,0.0009289844,0.0000048505576,0.000017598157,0.0000026361429,0.000021926673,0.00005495863,0.97379607,0.0027000816,0.0010384513,0.02139932],"study_design_scores_gemma":[0.00022897677,0.00013477409,0.00020626273,0.0000034846764,0.0000055248465,0.000018455103,0.000006513695,0.00010053103,0.6894358,0.0011898255,0.3085285,0.00014133246],"about_ca_topic_score_codex":0.00008521984,"about_ca_topic_score_gemma":0.00019251846,"teacher_disagreement_score":0.30749008,"about_ca_system_score_codex":0.000011887372,"about_ca_system_score_gemma":0.00003813331,"threshold_uncertainty_score":0.52810097},"labels":[],"label_agreement":null},{"id":"W193242014","doi":"10.1007/978-1-60327-355-8_7","title":"In Vivo Investigation of Protein–Protein Interactions for Helicases Using Tandem Affinity Purification","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Carleton University","funders":"","keywords":"Tandem affinity purification; Helicase; Protein–protein interaction; DNA; Escherichia coli; Affinity chromatography; RNA Helicase A; Chemistry; Biochemistry; Biology; Computational biology; RNA; Molecular biology; Enzyme; Gene","score_opus":0.051050804882096706,"score_gpt":0.39606682593503817,"score_spread":0.3450160210529415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W193242014","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45954686,0.00022175489,0.53931373,0.00018697206,0.00004576514,0.00062109774,0.0000079470265,0.0000045459783,0.00005131415],"genre_scores_gemma":[0.42418066,0.000009397433,0.57539004,0.00015183908,0.000038622074,0.00016092494,0.000018525643,0.000011296095,0.000038687245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800193,0.0008998291,0.00043660455,0.00038587148,0.00005071569,0.00022504853],"domain_scores_gemma":[0.99929243,0.000050673443,0.00021407267,0.00031895447,0.00008342932,0.000040434144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001146223,0.00015712176,0.00025492458,0.00018368599,0.000036437057,0.000007816966,0.00017353737,0.00025554415,0.00001365437],"category_scores_gemma":[0.00083591946,0.00016213776,0.000095361735,0.00021628175,0.000073445495,0.000007721882,0.00003418843,0.00009665983,3.7013947e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008186676,0.00005367212,0.00017168706,0.000016105985,0.000010190658,0.0000011690646,0.00002850191,0.000054339383,0.99108636,0.0031910068,0.0000031555983,0.0053019463],"study_design_scores_gemma":[0.00035362426,0.00034828854,0.00011634883,0.000047088422,0.000008210682,0.0000058301785,0.000021775562,0.00018401243,0.95668256,0.041096047,0.0009817858,0.00015444314],"about_ca_topic_score_codex":0.00004109838,"about_ca_topic_score_gemma":0.00001996803,"teacher_disagreement_score":0.03790504,"about_ca_system_score_codex":0.00003067598,"about_ca_system_score_gemma":0.00007291139,"threshold_uncertainty_score":0.6611786},"labels":[],"label_agreement":null},{"id":"W194210358","doi":"10.1007/978-1-60327-931-4_16","title":"Immune Ablation Followed by Autologous Hematopoietic Stem Cell Transplantation for the Treatment of Poor Prognosis Multiple Sclerosis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Polyomavirus and related diseases","field":"Medicine","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Medicine; Multiple sclerosis; Immune system; Hematopoietic stem cell transplantation; Transplantation; Ablation; Regimen; Immunology; Stem cell; Oncology; Haematopoiesis; Bone marrow; Internal medicine; Biology","score_opus":0.030135056359875918,"score_gpt":0.3447845686167476,"score_spread":0.3146495122568717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W194210358","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48071355,0.017665118,0.49941579,0.0006394909,0.00010033046,0.0013321216,0.000048308124,0.000029777708,0.00005553943],"genre_scores_gemma":[0.8824993,0.0015624337,0.11548431,0.00011708919,0.000008885405,0.00017432283,0.00009035216,0.000012170592,0.00005114362],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989283,0.00028788042,0.00033424847,0.0002069453,0.000050637394,0.00019199721],"domain_scores_gemma":[0.99928695,0.0003701064,0.0001145195,0.00015761073,0.00003166346,0.000039144838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024076574,0.00013434254,0.000339621,0.00007849543,0.00004573373,0.0000033817757,0.000061598905,0.00017919097,0.0000056167573],"category_scores_gemma":[0.000026687101,0.00008429279,0.00020087308,0.00014609293,0.00006359939,0.000010641556,0.0000029607945,0.000050554037,6.8545336e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041512094,0.0006046205,0.0017118298,0.00004072967,0.0000745254,0.0000055090304,0.00030074726,0.000042573323,0.8974567,0.00008079705,0.000010911701,0.09925592],"study_design_scores_gemma":[0.0032935925,0.0018355337,0.008906827,0.00004595735,0.00049197854,0.000008399181,0.000070514536,0.0018310846,0.98287636,0.00025422318,0.0002922613,0.00009327301],"about_ca_topic_score_codex":0.00005461566,"about_ca_topic_score_gemma":0.0000017864513,"teacher_disagreement_score":0.40178576,"about_ca_system_score_codex":0.000039578346,"about_ca_system_score_gemma":0.000029544495,"threshold_uncertainty_score":0.34373602},"labels":[],"label_agreement":null},{"id":"W195327869","doi":"10.1007/978-1-61779-148-2_18","title":"Identification of Proteolytic Products and Natural Protein N-Termini by Terminal Amine Isotopic Labeling of Substrates (TAILS)","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Protease; Chemistry; Proteolysis; Biochemistry; Isotopic labeling; Cleavage (geology); Proteome; Peptide; Biology; Enzyme","score_opus":0.019698680488628415,"score_gpt":0.3549587589066954,"score_spread":0.335260078418067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W195327869","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7733231,0.00046524414,0.22568195,0.000025132069,0.000008466648,0.00040072695,0.000010723217,0.00001731011,0.0000673387],"genre_scores_gemma":[0.46828604,0.000011160463,0.5314158,0.0000037200316,0.000004287947,0.00020167255,0.00001052071,0.000007756085,0.00005906103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990068,0.0000875941,0.00043907942,0.00029091976,0.000037303824,0.00013829838],"domain_scores_gemma":[0.99927694,0.000028052476,0.0002934285,0.00030663947,0.000076619785,0.000018347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003658629,0.000112538815,0.0002192259,0.00005878806,0.000017760809,0.000002770094,0.00017583802,0.00012378431,0.0000104723895],"category_scores_gemma":[0.00020705652,0.00010699271,0.000025330435,0.00013056326,0.0001977376,0.000028157378,0.000062574894,0.00015628764,1.846922e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017236334,0.00005767662,0.001033502,0.00019425676,0.00000815064,0.0000014412823,0.0000743577,1.7214097e-7,0.9893764,0.0020749741,3.1261047e-7,0.0071615116],"study_design_scores_gemma":[0.00014686938,0.000041853054,0.00009644104,0.00004039496,0.000009796137,0.000008784928,0.000022139915,0.00011353447,0.9797417,0.019654986,0.000026557642,0.000096951546],"about_ca_topic_score_codex":0.000027100872,"about_ca_topic_score_gemma":9.097929e-7,"teacher_disagreement_score":0.30573386,"about_ca_system_score_codex":0.000012264317,"about_ca_system_score_gemma":0.000018445178,"threshold_uncertainty_score":0.43630362},"labels":[],"label_agreement":null},{"id":"W19574730","doi":"10.1007/978-1-60761-588-0_3","title":"Current Knowledge of MicroRNAs and Noncoding RNAs in Virus-Infected Cells","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Dicer; microRNA; Biology; Gene silencing; RNA silencing; Argonaute; RNA; Trans-acting siRNA; Non-coding RNA; RNA interference; RNA-induced silencing complex; Untranslated region; Long non-coding RNA; Computational biology; Genetics; Gene","score_opus":0.0139498502536776,"score_gpt":0.37386839962043605,"score_spread":0.35991854936675843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W19574730","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85274047,0.003891227,0.14256442,0.000014880336,0.00036354215,0.00021842333,0.000012472249,0.000006032086,0.00018853397],"genre_scores_gemma":[0.6940522,0.00035452415,0.30534106,0.00003612689,0.00007734109,0.000031862928,0.00006339342,0.000031786163,0.000011704985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822307,0.0006613561,0.00038280775,0.00043643732,0.000031143503,0.0002651688],"domain_scores_gemma":[0.9993273,0.000062521714,0.00012919545,0.00035187713,0.000064576445,0.000064548294],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008780182,0.0001812768,0.0002734893,0.0002168848,0.00001795731,0.0000064940073,0.00018168996,0.00030776768,0.000015757483],"category_scores_gemma":[0.00032525507,0.0001859945,0.000075031116,0.00021871472,0.00020543057,0.0000025614515,0.00021209443,0.00025614034,0.0000018144992],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003509017,0.000111276866,0.0069596814,0.000039689785,0.000014179374,0.000002113716,0.000052372747,0.000009321642,0.96780944,0.00037607554,0.000012056329,0.024578713],"study_design_scores_gemma":[0.00061040104,0.00007384704,0.006465505,0.00002312905,0.000011047712,0.000007574833,0.0000073175497,0.00014998073,0.9806765,0.00078196346,0.01100984,0.0001829419],"about_ca_topic_score_codex":0.000036903475,"about_ca_topic_score_gemma":0.00018743958,"teacher_disagreement_score":0.16277663,"about_ca_system_score_codex":0.000015743704,"about_ca_system_score_gemma":0.000077600045,"threshold_uncertainty_score":0.75846356},"labels":[],"label_agreement":null},{"id":"W196210671","doi":"10.1007/978-1-60761-863-8_15","title":"The Guideline of the Design and Validation of MiRNA Mimics","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":160,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Canadian Institutes of Health Research","keywords":"microRNA; Gene silencing; Biology; Gene; Computational biology; Gene expression; RNA; RNA silencing; Messenger RNA; RNA interference; Endogeny; Untranslated region; Genetics; Biochemistry","score_opus":0.02093197367913341,"score_gpt":0.3739376272057808,"score_spread":0.35300565352664737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W196210671","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50824416,0.0004284363,0.49078387,0.00018261728,0.00018037563,0.00011569907,0.00000218409,0.0000013228913,0.00006133668],"genre_scores_gemma":[0.41052544,0.00023452347,0.58893657,0.0001952276,0.000030509364,0.000013101328,0.000006876775,0.000012168073,0.000045608944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873495,0.00063576334,0.00030651974,0.0001677028,0.000038341575,0.00011672534],"domain_scores_gemma":[0.9992588,0.00009592007,0.00014150515,0.0003839514,0.00010434599,0.000015456637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014245007,0.00008260787,0.00012241594,0.000026770096,0.000031794716,0.0000039579018,0.00028480808,0.00016560995,0.0000030953763],"category_scores_gemma":[0.00066427246,0.000049347575,0.00006081846,0.00007852907,0.00028244278,0.0000010186683,0.00014788445,0.00011435493,2.0966975e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034267658,0.000011965731,0.0013645188,0.000003194078,0.000018982195,1.7986625e-7,0.000016899368,0.00007042286,0.98802394,0.0006072908,0.00006906197,0.009779287],"study_design_scores_gemma":[0.00014931789,0.00012825172,0.0003609136,0.0000038124558,0.000010005846,0.000006499365,0.00002039945,0.00024773233,0.99129283,0.0035884862,0.0041374955,0.000054276425],"about_ca_topic_score_codex":0.000023127224,"about_ca_topic_score_gemma":0.000017465813,"teacher_disagreement_score":0.09815266,"about_ca_system_score_codex":0.0000018773816,"about_ca_system_score_gemma":0.000042668253,"threshold_uncertainty_score":0.20123358},"labels":[],"label_agreement":null},{"id":"W196395934","doi":"10.1007/978-1-62703-128-8_14","title":"Generation and Characterization of Murine Alternatively Activated Macrophages","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":239,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; BC Children's Hospital; University of British Columbia","funders":"","keywords":"Arginase; Chemokine; Cell biology; Innate immune system; Macrophage; Inflammation; Cytokine; Immune system; Biology; Nitric oxide; Phenotype; Immunology; Chemistry; Arginine; In vitro; Biochemistry; Endocrinology","score_opus":0.031075063473546632,"score_gpt":0.37091635226865366,"score_spread":0.339841288795107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W196395934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.767347,0.0026011027,0.22906369,0.000039711296,0.0006870642,0.00012386068,0.000008559975,0.000010998134,0.00011800891],"genre_scores_gemma":[0.8976267,0.00026292392,0.10152899,0.00012754444,0.000034129404,0.000027736365,0.0001562395,0.000015808237,0.00021992331],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981491,0.001187366,0.00024921226,0.00017435083,0.000011164167,0.00022879535],"domain_scores_gemma":[0.999577,0.00008114433,0.0001427403,0.00015172505,0.000037633068,0.00000977755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006424221,0.000114033195,0.00023570008,0.0001332758,0.000026468711,0.0000021657638,0.00009221701,0.00021388163,0.00014014439],"category_scores_gemma":[0.0001138192,0.000105116815,0.000027120434,0.0001162594,0.00018483344,0.00005040005,0.00008897818,0.00015211364,0.0000062086383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031719184,0.000048225163,0.005260933,0.000010197006,0.000050818875,6.425493e-7,0.00021607717,9.933251e-7,0.96672815,0.0012116068,0.000003086916,0.026437547],"study_design_scores_gemma":[0.00048847037,0.00006412911,0.012554213,0.000007245889,0.000011840849,0.000015401125,0.000011117268,0.000010125596,0.9840436,0.00012979569,0.002568317,0.00009576987],"about_ca_topic_score_codex":0.00003003202,"about_ca_topic_score_gemma":7.550734e-7,"teacher_disagreement_score":0.1302797,"about_ca_system_score_codex":0.000024737925,"about_ca_system_score_gemma":0.000011809638,"threshold_uncertainty_score":0.42865393},"labels":[],"label_agreement":null},{"id":"W196934136","doi":"10.1007/978-1-59745-396-7_19","title":"Use of Fluorescent Probes to Detect Lipid Signaling Intermediates in Macrophages","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"","keywords":"Cell biology; Phagocytosis; Signal transduction; Phosphatidylinositol; Cell signaling; Green fluorescent protein; Biology; Phosphorylation; Phosphatase; Kinase; Biochemistry; Gene","score_opus":0.02748696900081003,"score_gpt":0.3574248614016715,"score_spread":0.32993789240086147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W196934136","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8310453,0.0029090946,0.16523361,0.0001703037,0.00026954533,0.0003287234,0.0000051225916,0.000019018986,0.00001926969],"genre_scores_gemma":[0.7540951,0.00006494384,0.24552882,0.0002271249,0.000009068245,0.000020734868,0.000022160517,0.000009635704,0.000022431215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972885,0.0015141936,0.00051603385,0.00031919134,0.000017870263,0.00034416048],"domain_scores_gemma":[0.9993299,0.00024567283,0.0001135966,0.00025354535,0.00004084823,0.000016432032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081083976,0.00016868068,0.00044593535,0.00041619618,0.000021138017,0.0000067455003,0.00020920587,0.00027450797,0.000039120536],"category_scores_gemma":[0.00062905205,0.00014899069,0.000087191496,0.00031602298,0.00010818525,0.000040632618,0.00008801225,0.00022303437,0.000009332898],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011614308,0.000068761336,0.0027486254,0.000007744651,0.000020608339,0.0000042402803,0.00018504921,0.00016452494,0.870676,0.00030330574,0.000008032692,0.12569699],"study_design_scores_gemma":[0.0004807482,0.0004183587,0.022423128,0.00006995881,0.000009077779,0.000007890097,0.000021303891,0.000030245537,0.9741569,0.0015080444,0.0007322494,0.0001420987],"about_ca_topic_score_codex":0.00007961175,"about_ca_topic_score_gemma":0.000013499194,"teacher_disagreement_score":0.12555489,"about_ca_system_score_codex":0.00004607711,"about_ca_system_score_gemma":0.000023728471,"threshold_uncertainty_score":0.60756636},"labels":[],"label_agreement":null},{"id":"W197246149","doi":"10.1007/978-1-62703-478-4_11","title":"Histone Modification Profiling in Normal and Transformed Human Embryonic Stem Cells Using Micro Chromatin Immunoprecipitation, Scalable to Genome-Wide Microarray Analyses","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Population Health Research Institute","funders":"","keywords":"Biology; Epigenetics; Chromatin immunoprecipitation; Embryonic stem cell; Induced pluripotent stem cell; Histone; Somatic cell; Computational biology; Microarray; Cancer stem cell; Stem cell; Cell biology; Genetics; Gene; Gene expression; Promoter","score_opus":0.04021347936847962,"score_gpt":0.39581545764308945,"score_spread":0.3556019782746098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W197246149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6061265,0.002651861,0.39062527,0.000043190605,0.00004750692,0.0004505615,0.0000040836976,0.000005026659,0.000046006007],"genre_scores_gemma":[0.5159262,0.0001083774,0.48358604,0.00008767682,0.000019591844,0.000091053706,0.000088893896,0.000025998785,0.00006617687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976548,0.0007942141,0.00054955133,0.0005585257,0.00006298518,0.0003799418],"domain_scores_gemma":[0.99928373,0.000051387047,0.00013953909,0.00033648912,0.000110292356,0.000078556426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009908945,0.00022433039,0.00031619455,0.0003114746,0.00008141646,0.000032991196,0.00018805143,0.00028258818,0.000011116281],"category_scores_gemma":[0.000073330426,0.00023563037,0.000066507535,0.0003065844,0.00009616673,0.000009981449,0.00007666648,0.00013883617,0.000003272978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018243692,0.000041896445,0.0050591333,0.000030279889,0.000024090155,8.87817e-7,0.00017789534,0.0026110846,0.98916584,0.000021065169,0.0000010822981,0.0028484813],"study_design_scores_gemma":[0.00050371303,0.00016466535,0.009005357,0.000015470108,0.00001672257,0.0000017731152,0.00011545899,0.00080509676,0.98849374,0.00046188993,0.00015316551,0.00026295715],"about_ca_topic_score_codex":0.000310149,"about_ca_topic_score_gemma":0.00006018799,"teacher_disagreement_score":0.09296075,"about_ca_system_score_codex":0.00008361994,"about_ca_system_score_gemma":0.00005966988,"threshold_uncertainty_score":0.96087277},"labels":[],"label_agreement":null},{"id":"W1973852387","doi":"10.1007/978-1-4939-2428-8_4","title":"Longitudinal Studies 1: Determination of Risk","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Observational study; Confounding; Casual; Selection bias; Computer science; Clinical study design; Risk analysis (engineering); Econometrics; Psychology; Medicine; Statistics; Clinical trial; Mathematics","score_opus":0.3593001423795641,"score_gpt":0.5920642771108096,"score_spread":0.23276413473124546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1973852387","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021311672,0.0011778529,0.9767728,0.000018140967,0.00008399611,0.00012537009,0.0000029325888,0.000052181247,0.0004550682],"genre_scores_gemma":[0.03029705,0.000111995825,0.96951324,0.000014365793,0.0000102316935,0.00003265547,0.0000013716004,0.000011269583,0.000007808895],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99811435,0.0011629143,0.00032632743,0.00018458116,0.00006264819,0.00014915639],"domain_scores_gemma":[0.99820983,0.0011035452,0.00021202589,0.0002598056,0.0001867539,0.000028062213],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0023831148,0.00010763796,0.00034539585,0.00015035296,0.000010328234,0.000001695744,0.00014008248,0.00011612628,0.0000036834083],"category_scores_gemma":[0.012918166,0.00009196131,0.000042846914,0.0001792706,0.00017796019,0.00003646847,0.00011430582,0.000142787,9.0530295e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058893114,0.00015931526,0.023892077,0.00011660428,0.00006257253,0.000040112867,0.0017571062,0.000012998413,0.22975323,0.43576124,0.000038093804,0.30834773],"study_design_scores_gemma":[0.0001317513,0.00011606119,0.00009043624,0.000016442198,0.000016045591,0.0000045396105,0.00013417641,0.00008657359,0.23164296,0.76760036,0.00008871015,0.00007196737],"about_ca_topic_score_codex":0.000010594111,"about_ca_topic_score_gemma":0.000020475703,"teacher_disagreement_score":0.33183908,"about_ca_system_score_codex":0.00006093479,"about_ca_system_score_gemma":0.00002049308,"threshold_uncertainty_score":0.99539644},"labels":[],"label_agreement":null},{"id":"W19802479","doi":"10.1007/978-1-62703-128-8_9","title":"Simultaneous Cloning and Selection of Hybridomas and Transfected Cell Lines in Semisolid Media","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Cloning (programming); Transfection; Selection (genetic algorithm); Biology; Cell culture; Monoclonal antibody; Molecular biology; Cell biology; Antibody; Genetics; Computer science","score_opus":0.009391999133109084,"score_gpt":0.3380786324815844,"score_spread":0.3286866333484753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W19802479","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9251549,0.006341907,0.06810891,0.0000134636875,0.00011271835,0.00013429449,0.0000070454603,0.0000070361907,0.00011970026],"genre_scores_gemma":[0.9304305,0.0005770255,0.06877076,0.00008458792,0.000066529254,0.000020339761,0.000020794314,0.000016410058,0.000013106292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985547,0.00059522013,0.0002607568,0.00028126957,0.000036561578,0.00027146607],"domain_scores_gemma":[0.9995741,0.00013971346,0.00006555734,0.00010512038,0.000035286193,0.00008019064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044602648,0.00015033841,0.00023101106,0.00011795075,0.000026319502,0.0000049436267,0.000059905255,0.00022886314,0.00000763036],"category_scores_gemma":[0.00042492797,0.00014338174,0.00004367649,0.00014927468,0.0001092413,0.000003703003,0.00006767109,0.00012295564,1.886718e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008042322,0.00007701913,0.030026136,0.000038218303,0.00001167047,0.0000029200194,0.00012450539,0.00015079873,0.96320164,0.000045991877,0.000006204145,0.006234476],"study_design_scores_gemma":[0.0007088295,0.00028739878,0.0036313217,0.000018654217,0.000015096342,0.0000314784,0.000044895034,0.000495742,0.9936679,0.0003630587,0.0005667405,0.00016891009],"about_ca_topic_score_codex":0.00006801685,"about_ca_topic_score_gemma":0.000041652234,"teacher_disagreement_score":0.030466238,"about_ca_system_score_codex":0.00000782097,"about_ca_system_score_gemma":0.00002084399,"threshold_uncertainty_score":0.5846938},"labels":[],"label_agreement":null},{"id":"W199068460","doi":"10.1007/978-1-60761-938-3_13","title":"Isolation of Human Brain Endothelial Cells and Characterization of Lipid Raft-Associated Proteins by Mass Spectroscopy","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Notre-Dame","funders":"Canadian Institutes of Health Research","keywords":"Lipid microdomain; Lipid raft; Raft; Cell biology; Blood–brain barrier; Biology; Proteome; Chemistry; Central nervous system; Membrane; Neuroscience; Biochemistry; Signal transduction","score_opus":0.01434824153388927,"score_gpt":0.333664726709173,"score_spread":0.31931648517528377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W199068460","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54986995,0.000005580371,0.44942188,0.00008155173,0.0002466066,0.0001662241,0.000055123917,0.0000094508305,0.00014363542],"genre_scores_gemma":[0.85489273,0.000015360987,0.14468557,0.00024849077,0.00003772091,0.000021507049,0.000017629485,0.000014080169,0.00006691019],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998525,0.0007448122,0.00027878172,0.00025414478,0.00005770293,0.00013955192],"domain_scores_gemma":[0.999425,0.00015234927,0.00023308772,0.00013524303,0.00003313689,0.00002116911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004885884,0.00010218646,0.0002529609,0.00010411821,0.00004568524,0.000005376289,0.000088705005,0.00015391823,0.00002655199],"category_scores_gemma":[0.00059900613,0.00009323634,0.000034211167,0.00019120281,0.00022387726,0.000029191535,0.000041573636,0.00017818942,2.694286e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022426446,0.000021619562,0.0017912944,0.000008634518,0.000006083629,4.2245637e-7,0.00013397796,1.5149374e-7,0.9959236,0.0015106129,0.0000041719054,0.00057701865],"study_design_scores_gemma":[0.00036943634,0.00020967805,0.0018749981,0.0000037121267,0.000005918864,9.034039e-7,0.0000065445925,0.000064635584,0.9944303,0.0025617664,0.0003971542,0.00007492789],"about_ca_topic_score_codex":0.000015343332,"about_ca_topic_score_gemma":0.0000052269884,"teacher_disagreement_score":0.30502278,"about_ca_system_score_codex":0.0000074630343,"about_ca_system_score_gemma":0.0000119338165,"threshold_uncertainty_score":0.38020676},"labels":[],"label_agreement":null},{"id":"W201509594","doi":"10.1007/978-1-60761-869-0_6","title":"Regulatory CD4– CD8– Double Negative T Cells","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital","funders":"Canadian Institutes of Health Research; Terry Fox Foundation","keywords":"CD8; In vivo; Immunology; T-cell receptor; Peripheral blood; In vitro; T cell; Biology; Cytotoxic T cell; Cell biology; Immune system; Genetics","score_opus":0.015602375074189986,"score_gpt":0.3230463301575952,"score_spread":0.3074439550834052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W201509594","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8537062,0.0028338705,0.120464295,0.00052709266,0.0085323,0.0007304531,0.00002427746,0.0002260608,0.012955472],"genre_scores_gemma":[0.54358757,0.000083729894,0.44913548,0.0009804367,0.000088783054,0.00014641676,0.000103952065,0.00007811615,0.0057955054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99605495,0.0017526468,0.0005627466,0.00076960854,0.000027164197,0.00083288853],"domain_scores_gemma":[0.998304,0.00049613777,0.00020096745,0.00087127136,0.00008597722,0.000041609266],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014197878,0.0003773003,0.00065348047,0.00033400476,0.00014651156,0.000012005305,0.00066424947,0.00131503,0.0013520254],"category_scores_gemma":[0.00020244982,0.00033801707,0.00019668885,0.00033065706,0.0011440747,0.000046953257,0.00032628258,0.001528266,0.0005847765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001757459,0.00015727797,0.000551725,0.00000805718,0.00012274942,0.00002649957,0.00019346687,0.0000042130073,0.97130346,0.018694451,0.00028395944,0.008478417],"study_design_scores_gemma":[0.0022797624,0.00019554197,0.00016448474,0.0000068272784,0.000029312665,0.00008421497,0.00007694767,0.0000040631285,0.92024964,0.010368796,0.06618816,0.00035227824],"about_ca_topic_score_codex":0.00028146195,"about_ca_topic_score_gemma":0.00010360129,"teacher_disagreement_score":0.3286712,"about_ca_system_score_codex":0.000037276186,"about_ca_system_score_gemma":0.00010211894,"threshold_uncertainty_score":0.99998146},"labels":[],"label_agreement":null},{"id":"W202716781","doi":"10.1007/978-1-60327-394-7_8","title":"CelluSpots™: A Reproducible Means of Making Peptide Arrays for the Determination of SH2 Domain Binding Specificity","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Peptide; Combinatorial chemistry; Nanotechnology; Chemistry; Materials science; Biochemistry","score_opus":0.06080194923799461,"score_gpt":0.42702195818429006,"score_spread":0.36622000894629547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W202716781","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007140242,0.44943577,0.54983896,0.000017205019,0.000049883794,0.00037158214,0.000034775603,0.0000026070122,0.00017782877],"genre_scores_gemma":[0.00004864285,0.47342482,0.52615076,0.000017509288,0.000103239865,0.00007355226,0.00010840091,0.000030324441,0.000042730186],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99669594,0.0010659875,0.0010104993,0.0008205948,0.00009414701,0.00031282828],"domain_scores_gemma":[0.9976011,0.00047722762,0.00083858764,0.0009617488,0.00009212074,0.000029234718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030791315,0.00034169704,0.0014409685,0.00020454288,0.000045082692,0.000008261876,0.000590975,0.00056419946,0.000012320343],"category_scores_gemma":[0.0013375029,0.00024415937,0.0010328499,0.0003966494,0.00019229116,0.000001497881,0.00016041704,0.00020344892,3.9972966e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014404143,0.000041663294,0.0000056177414,0.0007723934,0.00010164964,0.0000010266815,0.000010815457,0.000005311001,0.46910283,0.00018906195,0.0000076113847,0.5297476],"study_design_scores_gemma":[0.00018434651,0.000161587,0.0000016440756,0.0010779547,0.0006078731,0.0000114531895,0.000029777662,0.00006359383,0.4677199,0.00186978,0.5279207,0.00035133658],"about_ca_topic_score_codex":0.00001132725,"about_ca_topic_score_gemma":0.000010271316,"teacher_disagreement_score":0.5293963,"about_ca_system_score_codex":0.000039341714,"about_ca_system_score_gemma":0.000078237135,"threshold_uncertainty_score":0.995653},"labels":[],"label_agreement":null},{"id":"W20327982","doi":"10.1007/978-1-61779-794-1_5","title":"Derivation and Maintenance of Undifferentiated Human Embryonic Stem Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Embryonic stem cell; Regenerative medicine; Inner cell mass; Biology; Cell biology; Induced pluripotent stem cell; Transplantation; Embryo; Blastomere; Stem cell; Embryogenesis; Blastocyst; Genetics; Medicine; Internal medicine","score_opus":0.029582055941063657,"score_gpt":0.37866602921358117,"score_spread":0.3490839732725175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W20327982","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66754645,0.0013979698,0.33055454,0.000029383902,0.00008700314,0.00016293609,0.000005154251,0.0000048030574,0.00021175557],"genre_scores_gemma":[0.8916372,0.00017243449,0.10771106,0.00006811167,0.000031468924,0.000023750548,0.000043620923,0.000022945229,0.00028942677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99796754,0.0009713013,0.000267355,0.00030661974,0.000067782894,0.0004193896],"domain_scores_gemma":[0.9993893,0.00003834572,0.00011063114,0.00032734065,0.000057432368,0.00007695281],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010337986,0.00014811305,0.00023771756,0.00012403083,0.000031945034,0.000005397847,0.00018881595,0.00024308468,0.000011203755],"category_scores_gemma":[0.00006348195,0.000138178,0.00005857351,0.00014817159,0.0001825909,0.000003265512,0.00023886577,0.00012958345,0.0000019589154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025326637,0.000057653877,0.012520984,0.00003796536,0.000034117536,0.0000012821569,0.00002550468,0.000006543513,0.98255926,0.0011079742,0.00002259706,0.0036007902],"study_design_scores_gemma":[0.00049842603,0.0001618651,0.0049571316,0.000012846861,0.0000095319265,0.0000077661825,0.000030674753,0.00004971019,0.9922937,0.00039472204,0.0014435255,0.00014005676],"about_ca_topic_score_codex":0.00001986463,"about_ca_topic_score_gemma":0.000006558082,"teacher_disagreement_score":0.22409073,"about_ca_system_score_codex":0.000018158531,"about_ca_system_score_gemma":0.00002198568,"threshold_uncertainty_score":0.5634735},"labels":[],"label_agreement":null},{"id":"W203432939","doi":"10.1007/978-1-60761-999-4_3","title":"Standardized Isolation of Human Mesenchymal Stromal Cells with Red Blood Cell Lysis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Deutsche Forschungsgemeinschaft; Stem Cell Network","keywords":"Mesenchymal stem cell; Lysis; CD34; Bone marrow; Peripheral blood mononuclear cell; Hemolysis; Stromal cell; Immunophenotyping; Biology; Chemistry; Immunology; Cell biology; Flow cytometry; Cancer research; Stem cell; Biochemistry; In vitro","score_opus":0.04849931423124915,"score_gpt":0.4075662713569199,"score_spread":0.35906695712567077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W203432939","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5821077,0.00018528495,0.39641044,0.000025931544,0.000038499296,0.00046888375,0.000006277212,0.000019967321,0.020737004],"genre_scores_gemma":[0.41130036,0.000009940974,0.58836997,0.000019249808,0.000013657903,0.000021068736,0.000013992342,0.000022360136,0.00022941754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965807,0.0017174053,0.00052039535,0.00047226256,0.0002656047,0.00044361135],"domain_scores_gemma":[0.99874145,0.00015835301,0.00018958456,0.0005671872,0.00020502282,0.00013839205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021266749,0.00020664203,0.0006963374,0.0003875041,0.0000383492,0.0000044074195,0.0002014673,0.0002620649,0.0006140157],"category_scores_gemma":[0.00019590737,0.00016204243,0.00013467918,0.0005116627,0.00026004488,0.000023957073,0.0000870824,0.00034788533,0.0000034434108],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005835459,0.0002651774,0.023131689,0.00009217309,0.000117708376,0.00015659592,0.00029781088,0.0000040163172,0.9739046,0.00056622387,0.000005266254,0.00087519],"study_design_scores_gemma":[0.0030098052,0.002801727,0.0034212621,0.0000391247,0.00016700312,0.000021708729,0.0001250555,0.00012383395,0.98924375,0.0008254655,0.00006885853,0.00015240473],"about_ca_topic_score_codex":0.00020941213,"about_ca_topic_score_gemma":0.000015648473,"teacher_disagreement_score":0.19195953,"about_ca_system_score_codex":0.000046877816,"about_ca_system_score_gemma":0.00012602667,"threshold_uncertainty_score":0.67230415},"labels":[],"label_agreement":null},{"id":"W20478326","doi":"10.1007/978-1-60327-853-9_14","title":"Untangling Hybrid Phylogenetic Signals: Horizontal Gene Transfer and Artifacts of Phylogenetic Reconstruction","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Phylogenetic tree; Phylogenetic network; Horizontal gene transfer; Computational phylogenetics; Biology; Evolutionary biology; Phylogenetics; Inference; Tree (set theory); Computational biology; Genetics; Gene; Artificial intelligence; Computer science; Mathematics","score_opus":0.016209502406229367,"score_gpt":0.3129572071460004,"score_spread":0.296747704739771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W20478326","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7805055,0.0077819717,0.21108942,0.000052693125,0.00015462704,0.00022333383,0.000018138198,0.0000035936794,0.00017075527],"genre_scores_gemma":[0.78432965,0.0009615408,0.2144328,0.00015331844,0.00006510847,0.000015342519,0.000016451204,0.00001884193,0.00000692988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979425,0.0005166972,0.0004872536,0.00060538045,0.000066153676,0.00038202773],"domain_scores_gemma":[0.99937284,0.00004354114,0.000088446875,0.00033845924,0.0000746262,0.00008206035],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005885307,0.00027751326,0.00042912128,0.00014585367,0.00005212139,0.00000936943,0.00018420156,0.0002134932,0.000007682569],"category_scores_gemma":[0.00011319508,0.0002793998,0.00012209348,0.0001391515,0.00023594122,9.475435e-7,0.00007407128,0.0001240327,6.1908537e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006714521,0.000044892855,0.003980187,0.00001054344,0.000063131905,0.0000063932794,0.000042435055,0.00018536953,0.8880777,0.00015054429,0.0000013499836,0.107370354],"study_design_scores_gemma":[0.0006544191,0.001050846,0.0068953736,0.000013299715,0.000042048687,0.00011267872,0.000046919566,0.0001416808,0.9848419,0.005597939,0.00031261472,0.00029027433],"about_ca_topic_score_codex":0.000015265216,"about_ca_topic_score_gemma":0.000010867787,"teacher_disagreement_score":0.10708008,"about_ca_system_score_codex":0.000013969056,"about_ca_system_score_gemma":0.000046095814,"threshold_uncertainty_score":0.99996585},"labels":[],"label_agreement":null},{"id":"W204861676","doi":"10.1007/978-1-62703-038-0_42","title":"Testicular Tissue Grafting and Male Germ Cell Transplantation","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Spermatogenesis; Germ cell; Biology; Transplantation; Andrology; Stem cell; Population; Germ; Grafting; Embryo; Cell biology; Immunology; Internal medicine; Endocrinology; Medicine; Genetics; Chemistry","score_opus":0.022581126278684648,"score_gpt":0.37233061175820276,"score_spread":0.3497494854795181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W204861676","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.386681,0.0017296888,0.6089639,0.000081930055,0.00015576174,0.00016842091,0.0000012122667,0.000023609207,0.002194519],"genre_scores_gemma":[0.38292187,0.00006823082,0.6164812,0.00032584832,0.000063596555,0.00001789953,0.000029066357,0.000013995802,0.00007833015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988989,0.0003963361,0.00018715198,0.00019949791,0.00005225501,0.00026581768],"domain_scores_gemma":[0.9994998,0.0001924463,0.00004724402,0.00014177017,0.000026064377,0.00009268221],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008144626,0.00011551468,0.00021120784,0.000120634824,0.000028266179,0.0000046204677,0.000028573273,0.00015515105,0.00009050736],"category_scores_gemma":[0.0003895257,0.00010303215,0.00003419834,0.00015090813,0.000062800806,0.000028780469,0.000016169246,0.00015195945,0.000009773595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021087382,0.000056898083,0.1502984,0.00006620547,0.000009936397,0.00007198979,0.00013472035,0.0000029401058,0.82951826,0.00052713434,0.0000037093907,0.019288715],"study_design_scores_gemma":[0.0013870485,0.0003177069,0.10293704,0.000045386572,0.000227957,0.0015693412,0.000052358177,0.00031756828,0.88888407,0.00074930536,0.003287476,0.00022476491],"about_ca_topic_score_codex":0.00003126525,"about_ca_topic_score_gemma":0.0000010309138,"teacher_disagreement_score":0.059365783,"about_ca_system_score_codex":0.000020963222,"about_ca_system_score_gemma":0.000014427829,"threshold_uncertainty_score":0.4201529},"labels":[],"label_agreement":null},{"id":"W206340496","doi":"10.1007/978-1-4939-0473-0_43","title":"Strategy for Genome Sequencing Analysis and Assembly for Comparative Genomics of Pseudomonas Genomes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds de Recherche du Québec - Santé; Society for General Microbiology; Canadian Institutes of Health Research; Royal Society","keywords":"Genome; Biology; Genomics; Comparative genomics; Personal genomics; Whole genome sequencing; Computational biology; DNA sequencing; Genetics; Sequence assembly; Bacterial genome size; Gene","score_opus":0.0542828166702849,"score_gpt":0.39330211980884583,"score_spread":0.33901930313856093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W206340496","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41330782,0.002391883,0.58377314,0.000016740329,0.000034102937,0.00031404846,0.000058992242,0.0000012874689,0.00010197227],"genre_scores_gemma":[0.4813421,0.00017917488,0.5181677,0.000072345676,0.00003945932,0.00009420156,0.000074561976,0.000013511714,0.000016960938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984112,0.00034947996,0.00039948008,0.0005060664,0.00003026649,0.00030352737],"domain_scores_gemma":[0.9991135,0.00021914096,0.00018574622,0.00029528956,0.00013565019,0.000050664312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011344566,0.00020580518,0.0005985801,0.00017167174,0.000058069043,0.000009650186,0.00018713961,0.00019396424,0.0000010585852],"category_scores_gemma":[0.00014576285,0.00020077216,0.00021000885,0.00016200813,0.00016730251,6.456427e-7,0.00011622978,0.000052201613,9.106144e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075822936,0.000017582539,0.0019610887,0.00003368467,0.0006227146,1.5835693e-7,0.00013294336,0.0028293855,0.9883252,0.0021997425,0.0000018022762,0.0037998818],"study_design_scores_gemma":[0.001032336,0.0011425028,0.0032133362,0.0000028420832,0.00035336378,0.0000035886103,0.00025792856,0.0046381108,0.97190726,0.01045225,0.0066428757,0.0003536277],"about_ca_topic_score_codex":0.000028693452,"about_ca_topic_score_gemma":0.00007572654,"teacher_disagreement_score":0.06803429,"about_ca_system_score_codex":0.0000216857,"about_ca_system_score_gemma":0.000061297615,"threshold_uncertainty_score":0.81872517},"labels":[],"label_agreement":null},{"id":"W206556033","doi":"10.1007/978-1-60327-569-9_7","title":"Electrochemical DNA Biosensors: Protocols for Intercalator-Based Detection of Hybridization in Solution and at the Surface","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Biosensor; DNA; Nanotechnology; Nucleic acid; Intercalation (chemistry); DNA–DNA hybridization; Computational biology; Electrochemistry; Hybridization probe; Chemistry; Materials science; Combinatorial chemistry; Computer science; Biology; Biochemistry; Electrode; Inorganic chemistry","score_opus":0.015444811053403054,"score_gpt":0.3837076770750583,"score_spread":0.36826286602165526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W206556033","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38421667,0.00011833869,0.614317,0.00016393668,0.000007983474,0.0011582497,0.0000028639668,0.000007641607,0.000007298216],"genre_scores_gemma":[0.71525556,0.000017221711,0.2843533,0.00016808673,0.00001308947,0.00013724879,0.000040900777,0.000007629708,0.0000069574266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986809,0.00045411807,0.00029100353,0.00033934542,0.000039232822,0.00019542],"domain_scores_gemma":[0.99950385,0.000058669248,0.0001245518,0.00022322014,0.00006572721,0.000023973766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079702266,0.00013006438,0.0002031424,0.000076951095,0.000032021595,0.0000047550993,0.00008932642,0.000226605,2.9370642e-7],"category_scores_gemma":[0.0005162621,0.00010133194,0.000074966316,0.00019039048,0.00013948791,0.0000019669749,0.000037725258,0.000087244975,4.2505803e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024394329,0.000041773063,0.0003618736,0.0000101463775,0.0000079070305,3.224378e-7,0.000004994753,0.000016844962,0.99117297,0.000040220562,0.0000026950204,0.008096291],"study_design_scores_gemma":[0.0004217338,0.00057257974,0.00019605522,0.000018773584,0.000010850157,0.0000055199607,0.000005681837,0.0018239861,0.99526876,0.0010644062,0.0004974884,0.00011416029],"about_ca_topic_score_codex":0.000006089084,"about_ca_topic_score_gemma":0.000037303824,"teacher_disagreement_score":0.3310389,"about_ca_system_score_codex":0.00003972519,"about_ca_system_score_gemma":0.000024089768,"threshold_uncertainty_score":0.41321966},"labels":[],"label_agreement":null},{"id":"W206645991","doi":"10.1007/978-1-60761-362-6_20","title":"Determining Ligand Specificity of Ly49 Receptors","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Receptor; Computational biology; Biology; Computer science; Chemistry; Genetics","score_opus":0.02322273008187741,"score_gpt":0.3544462612379026,"score_spread":0.3312235311560252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W206645991","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.457071,0.0023955952,0.5244958,0.0001840081,0.005456086,0.00021076913,0.000001443153,0.000057294408,0.010128022],"genre_scores_gemma":[0.7914532,0.00016856768,0.20525518,0.0007211813,0.000030466315,0.000009708412,0.00005745881,0.000016750602,0.0022875296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981134,0.0009969849,0.0003936841,0.0002503406,0.000012222392,0.00023336525],"domain_scores_gemma":[0.99941164,0.00015889516,0.0001444031,0.00023103121,0.00004395181,0.0000100984535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068384595,0.00013029893,0.0003145036,0.00021191593,0.00003614827,0.0000031493314,0.00014717187,0.00030455025,0.00042096892],"category_scores_gemma":[0.00032448737,0.00012034613,0.00010027094,0.00017547683,0.00011832142,0.000028864359,0.000032817945,0.00029103973,0.000047232104],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007449099,0.000059507114,0.0010528166,0.0000024877072,0.000021002184,0.0000024968435,0.000089170375,0.000003757937,0.8923371,0.00084319356,0.00015665694,0.10535736],"study_design_scores_gemma":[0.00047605167,0.00039793743,0.0023668997,0.000015906777,0.000009711477,0.000027955612,0.000088669665,0.0000075309395,0.965014,0.001159656,0.030320939,0.00011477246],"about_ca_topic_score_codex":0.000017891853,"about_ca_topic_score_gemma":0.0000015847268,"teacher_disagreement_score":0.33438215,"about_ca_system_score_codex":0.000028907392,"about_ca_system_score_gemma":0.000015253927,"threshold_uncertainty_score":0.49075726},"labels":[],"label_agreement":null},{"id":"W207390916","doi":"10.1007/978-1-59745-581-7_11","title":"Computational Reconstruction of Ancestral DNA Sequences","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Human Genome Research Institute; Howard Hughes Medical Institute","keywords":"Phylogenetic tree; Inference; Sequence (biology); Tree (set theory); Biology; Evolutionary biology; Computational biology; Set (abstract data type); DNA sequencing; Genome; Multiple sequence alignment; Phylogenetics; Extant taxon; DNA; Sequence alignment; Genetics; Gene; Computer science; Artificial intelligence; Mathematics; Combinatorics; Peptide sequence","score_opus":0.03532729906487158,"score_gpt":0.3621917611658635,"score_spread":0.3268644621009919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W207390916","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7721969,0.0011536699,0.22580503,0.00003666491,0.00016272743,0.00007230418,0.00000907406,0.0000016208484,0.0005620128],"genre_scores_gemma":[0.52236664,0.00017509749,0.4773366,0.000054548014,0.000027099228,0.0000084157255,0.000012750683,0.0000051712636,0.000013670603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989907,0.0002981678,0.0002541574,0.0002604576,0.00003785053,0.00015862245],"domain_scores_gemma":[0.9996437,0.00003193375,0.00009400086,0.00014445631,0.000060940296,0.00002499896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002909113,0.000104075494,0.00018727375,0.00006246251,0.000037233396,0.0000015093394,0.00012301058,0.00012390791,0.0000066757752],"category_scores_gemma":[0.00009844263,0.000101077196,0.00007035052,0.000099479745,0.00035197934,4.5818484e-7,0.00006118232,0.0000570462,6.15258e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019276109,0.000018164325,0.033329718,0.0000050200333,0.000034098186,0.000003129023,0.0000365462,0.0012466565,0.9573508,0.00070782384,0.00000804993,0.0072407075],"study_design_scores_gemma":[0.00046499065,0.00034962266,0.02272272,0.000007116103,0.000008725152,0.00018391073,0.00005510667,0.0002184347,0.95914215,0.0153755,0.0012725758,0.0001991379],"about_ca_topic_score_codex":0.0000261188,"about_ca_topic_score_gemma":0.000007020529,"teacher_disagreement_score":0.25153154,"about_ca_system_score_codex":0.000007087349,"about_ca_system_score_gemma":0.000065600325,"threshold_uncertainty_score":0.41218084},"labels":[],"label_agreement":null},{"id":"W20779778","doi":"10.1007/978-1-60327-058-8_21","title":"High Throughput Screening of Purified Proteins for Enzymatic Activity","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Proteome; Enzyme; Biochemistry; Proteases; Genome; Computational biology; Biology; Function (biology); Proteomics; ENCODE; Gene; Chemistry; Genetics","score_opus":0.049193570527383546,"score_gpt":0.41337721078228784,"score_spread":0.3641836402549043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W20779778","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.100671075,0.00007536383,0.8983482,0.00009833306,0.000010488362,0.00040511362,0.000021147622,0.00004608997,0.00032418835],"genre_scores_gemma":[0.10127298,0.000022194508,0.8977668,0.0000344668,0.000017582806,0.00079599355,0.000014739385,0.00001836452,0.00005683795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991394,0.00010478433,0.0002508316,0.00027181001,0.00003636092,0.00019678514],"domain_scores_gemma":[0.9991925,0.000197902,0.00016781132,0.00037608022,0.000041639913,0.000024114073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033104906,0.00011815968,0.00029341123,0.000047656013,0.00005357153,0.0000017063837,0.00020191024,0.00019153021,0.000023933164],"category_scores_gemma":[0.00026639382,0.00011632093,0.00008774298,0.0001206031,0.00013759066,0.000019635749,0.000074202726,0.00016725365,3.0051115e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002913829,0.00004989375,0.00014618815,0.000049962484,0.000013552736,0.0000014244819,0.000027933915,0.00005506236,0.9708784,0.015501178,0.0000028882735,0.0132443495],"study_design_scores_gemma":[0.0002787801,0.000038658764,0.000025999057,0.00001652089,0.000006560394,0.0000066337893,0.0000052410455,0.00043350842,0.9301386,0.06822695,0.0007148446,0.000107712396],"about_ca_topic_score_codex":0.00007291286,"about_ca_topic_score_gemma":0.000002008574,"teacher_disagreement_score":0.052725773,"about_ca_system_score_codex":0.000023488012,"about_ca_system_score_gemma":0.000025349791,"threshold_uncertainty_score":0.474343},"labels":[],"label_agreement":null},{"id":"W207948098","doi":"10.1007/978-1-60761-769-3_14","title":"Preparation and Analysis of MicroRNA Libraries Using the Illumina Massively Parallel Sequencing Technology","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Massive parallel sequencing; microRNA; Illumina dye sequencing; Computational biology; DNA sequencing; Biology; Deep sequencing; Massively parallel; Small RNA; Computer science; Genetics; Gene; Genome; Parallel computing","score_opus":0.017829192871028212,"score_gpt":0.358426862182355,"score_spread":0.3405976693113268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W207948098","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57297415,0.00072540337,0.426001,0.00008076804,0.000044907454,0.00012578054,0.000007639958,0.000005351828,0.000034960656],"genre_scores_gemma":[0.49380535,0.000021506332,0.50602776,0.000052714582,0.000014905572,0.000014400779,0.000045920526,0.000009787468,0.000007631932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861515,0.00044395146,0.00032042412,0.000379407,0.00004371208,0.00019733704],"domain_scores_gemma":[0.9991618,0.000050316765,0.0002106208,0.0004704036,0.000076395554,0.000030507983],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006033564,0.00014621139,0.00026878715,0.00033955963,0.000056639652,0.00001288299,0.00022165102,0.00036666304,0.000009565462],"category_scores_gemma":[0.0004248933,0.000120307974,0.00009845512,0.0006222922,0.00057071424,0.000004974153,0.0001984351,0.00015904891,1.537715e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003941274,0.000012801576,0.011663148,0.00000831072,0.00023795593,0.0000018680463,0.000071776536,0.0005448332,0.9823741,0.0034228312,0.0000022167037,0.0016207742],"study_design_scores_gemma":[0.00020045575,0.00007067661,0.0037460069,0.0000046756345,0.00023905844,0.000018539497,0.000093035764,0.0058545168,0.9852012,0.0037759736,0.000649135,0.0001467293],"about_ca_topic_score_codex":0.000028335367,"about_ca_topic_score_gemma":0.000045127075,"teacher_disagreement_score":0.08002677,"about_ca_system_score_codex":0.000013245593,"about_ca_system_score_gemma":0.000094965726,"threshold_uncertainty_score":0.4906017},"labels":[],"label_agreement":null},{"id":"W2088633","doi":"10.1007/978-1-62703-155-4_22","title":"Synthesis, Mass Spectrometric Characterization, and Analysis of the PPARδ Agonist GW1516 and Its Major Human Metabolites: Targets in Sports Drug Testing","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"World Anti-Doping Agency","keywords":"Metabolite; Chemistry; Chromatography; Mass spectrometry; Liquid chromatography–mass spectrometry; Metabolomics; Tandem mass spectrometry; Urine; Drug; Drug metabolism; Pharmacology; Biochemistry; Metabolism; Biology","score_opus":0.014749801168385425,"score_gpt":0.3186002147551589,"score_spread":0.30385041358677345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2088633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97016335,0.00517775,0.024169939,0.000049713424,0.00009594907,0.0002338841,0.000033871034,0.0000069717075,0.00006860038],"genre_scores_gemma":[0.938329,0.00023724962,0.061138537,0.00008874423,0.000039317634,0.00004822703,0.00007111599,0.000023938657,0.00002391657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974038,0.0011934387,0.00046289887,0.00044634315,0.00009073602,0.0004028057],"domain_scores_gemma":[0.99913776,0.00012515688,0.0002594699,0.0003268728,0.000068110305,0.0000826339],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001597007,0.00023274751,0.0005213318,0.0006333978,0.00006834163,0.000012719666,0.00020685501,0.00023361798,0.000014521376],"category_scores_gemma":[0.0014839568,0.00018827402,0.00009051401,0.0017412619,0.0001539604,0.0000096379645,0.00020607065,0.00017955655,1.6151965e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008292944,0.00003837122,0.36796883,0.000014429089,0.00012048367,8.211374e-7,0.000040461557,0.0000035109526,0.6304838,0.0001338341,3.3408654e-7,0.0011868417],"study_design_scores_gemma":[0.00015534871,0.000021533613,0.20158397,0.000010485951,0.00015675367,0.0000049384703,0.00002192465,0.00007600765,0.79745984,0.0000853301,0.00026132807,0.00016252014],"about_ca_topic_score_codex":0.000029333358,"about_ca_topic_score_gemma":0.000008332317,"teacher_disagreement_score":0.16697608,"about_ca_system_score_codex":0.000023811956,"about_ca_system_score_gemma":0.000033178832,"threshold_uncertainty_score":0.76775914},"labels":[],"label_agreement":null},{"id":"W2109400942","doi":"10.1007/978-1-61779-204-5_12","title":"Analysis of Epigenetic Alterations to Proprotein Convertase Genes in Disease","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Epigenetics; DNA methylation; Biology; Histone; Chromatin; Genetics; Cancer epigenetics; Epigenomics; Proprotein convertase; Acetylation; Gene; Gene expression; Cancer research; Biochemistry","score_opus":0.03227079856938663,"score_gpt":0.37994122490934457,"score_spread":0.3476704263399579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2109400942","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4753434,0.0016213099,0.5225778,0.000025459869,0.000043633823,0.00025925876,0.00001848862,0.0000025208976,0.00010807698],"genre_scores_gemma":[0.6442823,0.00012019081,0.35520798,0.00010860419,0.000012342446,0.0001140424,0.00011592245,0.000013867748,0.000024803181],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790114,0.0008613361,0.0004601888,0.0004686145,0.000060728413,0.00024798236],"domain_scores_gemma":[0.99917305,0.000028534603,0.000097899065,0.0005066056,0.000079422614,0.000114505776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079887715,0.00015648603,0.00031584912,0.0005531949,0.000018217026,0.0000044224407,0.00020977692,0.00015407745,0.000044543234],"category_scores_gemma":[0.00040628758,0.00015633335,0.00013561803,0.00064696703,0.00008303909,0.0000017151576,0.00011563018,0.00006942903,0.0000017821004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007600057,0.00010794716,0.11177987,0.0000093554045,0.00010040477,0.0000073026517,0.00015043473,0.0014661284,0.87523216,0.0003778972,3.7451048e-7,0.010692126],"study_design_scores_gemma":[0.00026034252,0.00023596417,0.06720548,0.000006828191,0.000109113906,1.823902e-7,0.000018147448,0.0008852133,0.9287473,0.0017917842,0.0005509049,0.00018875726],"about_ca_topic_score_codex":0.00022627418,"about_ca_topic_score_gemma":0.0004028241,"teacher_disagreement_score":0.16893885,"about_ca_system_score_codex":0.000014191038,"about_ca_system_score_gemma":0.00006873907,"threshold_uncertainty_score":0.6375089},"labels":[],"label_agreement":null},{"id":"W2135402414","doi":"10.1007/978-1-60327-547-7_20","title":"Emergence of a Complex Relationship between HIV-1 and the microRNA Pathway","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Dicer; microRNA; Gene silencing; Biology; Small interfering RNA; Argonaute; Viral replication; RNA silencing; RNA; Trans-acting siRNA; RNA interference; Untranslated region; Translation (biology); RNA-induced silencing complex; Virology; Computational biology; Messenger RNA; Virus; Genetics; Gene","score_opus":0.11163411635049315,"score_gpt":0.43577388620179536,"score_spread":0.3241397698513022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2135402414","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003048675,0.8723381,0.12635902,0.000033341432,0.00008918603,0.00042737173,0.00008374426,0.0000039997008,0.00036037457],"genre_scores_gemma":[0.00028865653,0.91250235,0.08643549,0.0000697081,0.00007936407,0.00007987284,0.00040797007,0.000031055148,0.00010551786],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953308,0.002984132,0.0008003176,0.00055508513,0.00005963539,0.0002700231],"domain_scores_gemma":[0.9984188,0.00044844174,0.000407113,0.0006182399,0.000060338487,0.000047053636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009280033,0.000349333,0.0012477228,0.00015231747,0.000057211415,0.0000061175397,0.00053193286,0.0006314644,0.000014703387],"category_scores_gemma":[0.00073231285,0.00024163042,0.0004212314,0.00023542371,0.0007083468,0.0000014180864,0.00034723416,0.0003541933,0.0000057434722],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075379576,0.000049855073,0.0030299705,0.0015882542,0.00049255416,0.000017945855,0.00012564742,0.0000023347347,0.03787658,0.0024182987,0.00082436675,0.95349884],"study_design_scores_gemma":[0.0007932356,0.00023982789,0.00022728516,0.00064290874,0.00023791283,0.00013678851,0.00003724609,0.0000060276916,0.0058348724,0.0017782659,0.9895073,0.00055831915],"about_ca_topic_score_codex":0.000024623441,"about_ca_topic_score_gemma":0.0000050456765,"teacher_disagreement_score":0.9886829,"about_ca_system_score_codex":0.0000067833885,"about_ca_system_score_gemma":0.00013709858,"threshold_uncertainty_score":0.98534024},"labels":[],"label_agreement":null},{"id":"W21370160","doi":"10.1007/978-1-61737-960-4_31","title":"Cell Sheet Technology for Tissue Engineering: The Self-Assembly Approach Using Adipose-Derived Stromal Cells","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Adipose tissue; Tissue engineering; Stromal cell; Extracellular matrix; Connective tissue; Cell biology; Mesenchymal stem cell; Stem cell; Adipocyte; Regenerative medicine; Biomedical engineering; Biology; Pathology; Medicine; Cancer research; Endocrinology","score_opus":0.029284695160951956,"score_gpt":0.3905659007753669,"score_spread":0.36128120561441496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W21370160","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27944636,0.0004117808,0.717568,0.00027846143,0.00028817143,0.0012230823,0.0000039770766,0.000085904234,0.0006942831],"genre_scores_gemma":[0.11827999,0.000010885763,0.88119674,0.000085792235,0.000094749885,0.00018160173,0.000010872215,0.000060282215,0.000079111494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975692,0.0005560547,0.0003859345,0.0005843145,0.0001402411,0.00076426874],"domain_scores_gemma":[0.99833333,0.000563197,0.000091666385,0.00075342425,0.000125324,0.00013305923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026498071,0.00026795315,0.00053127797,0.00041645666,0.000074341275,0.000016845814,0.000490439,0.0006756413,0.000031215626],"category_scores_gemma":[0.000746379,0.00019978594,0.0001146787,0.00057928415,0.00017578916,0.000017285833,0.00023394676,0.0010008465,0.000006494344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004263877,0.00013532011,0.00031923447,0.00012676562,0.000053693257,0.000036070007,0.000057964793,0.00013765923,0.9932021,0.0019036242,0.000015349333,0.0039696028],"study_design_scores_gemma":[0.0008816272,0.0004063785,0.00007609519,0.000009348877,0.00006631093,0.00011367057,0.000058073834,0.03753308,0.9533181,0.00033768025,0.007013183,0.00018642278],"about_ca_topic_score_codex":0.000032010546,"about_ca_topic_score_gemma":0.0000026740422,"teacher_disagreement_score":0.16362873,"about_ca_system_score_codex":0.000069591515,"about_ca_system_score_gemma":0.00018079548,"threshold_uncertainty_score":0.8147034},"labels":[],"label_agreement":null},{"id":"W2157256056","doi":"10.1007/978-1-61779-585-5_10","title":"Evolution of Viral Genomes: Interplay Between Selection, Recombination, and Other Forces","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AIDS Vancouver","funders":"","keywords":"Biology; Viral evolution; Genome; Evasion (ethics); Adaptation (eye); Recombination; Gene; Adaptive evolution; Genetics; Evolutionary biology; Experimental evolution; Computational biology; Evolutionary dynamics; Immune system","score_opus":0.027465505890190773,"score_gpt":0.42455433708987617,"score_spread":0.3970888311996854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2157256056","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011439187,0.5831934,0.41609746,0.0000036336323,0.00012244364,0.0002479026,0.00003137905,0.0000058024016,0.00018355504],"genre_scores_gemma":[0.00032788055,0.7753661,0.2234467,0.00004138128,0.00015878792,0.00008057364,0.0002927702,0.000063710606,0.00022209305],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99676293,0.0016404808,0.00070643163,0.0005096441,0.000058792088,0.0003217256],"domain_scores_gemma":[0.9990641,0.00007135541,0.00040018078,0.00031454684,0.00008019351,0.00006962825],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012585407,0.00033612136,0.00090394024,0.00031630488,0.000035372446,0.000007374238,0.0002571322,0.00085701485,0.000017715187],"category_scores_gemma":[0.0001722008,0.00030862697,0.00022731943,0.0002533735,0.00020958198,0.000002597007,0.00020018984,0.0002372846,0.0000026221057],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001290486,0.00007234871,0.0059716897,0.0017010659,0.00034214414,3.9612922e-7,0.00004350037,0.000011014867,0.013842088,0.0049102646,0.000028311233,0.97306424],"study_design_scores_gemma":[0.0002854074,0.00031674333,0.00011925637,0.00028089198,0.00032995897,0.00003512345,0.000015163807,0.000052626783,0.00095957203,0.0027699906,0.9944069,0.0004283718],"about_ca_topic_score_codex":0.000032246902,"about_ca_topic_score_gemma":0.000026637588,"teacher_disagreement_score":0.99437857,"about_ca_system_score_codex":0.00007894028,"about_ca_system_score_gemma":0.00013184804,"threshold_uncertainty_score":0.9999366},"labels":[],"label_agreement":null},{"id":"W2162254890","doi":"10.1007/978-1-61779-207-6_6","title":"Live Cell Imaging of Neuronal Growth Cone Motility and Guidance In Vitro","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Alberta Innovates - Health Solutions; National Institute of Neurological Disorders and Stroke; Purdue University","keywords":"Growth cone; Live cell imaging; Biology; Cell biology; Aplysia; Motility; Differential interference contrast microscopy; Cytoskeleton; Neuroscience; Cell; Microscopy; Biochemistry; Pathology","score_opus":0.05095491115553422,"score_gpt":0.35297394976633323,"score_spread":0.302019038610799,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2162254890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8467577,0.00063183607,0.15117021,0.000043106567,0.000098625205,0.00015277587,0.0000072086996,0.000013963467,0.0011245635],"genre_scores_gemma":[0.81904566,0.000028932127,0.18013029,0.00076047465,0.0000064656556,0.000011303788,3.822883e-7,0.000011579578,0.00000490336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690837,0.0017627002,0.00039671062,0.00054520665,0.00007320485,0.0003138331],"domain_scores_gemma":[0.9991029,0.0004860908,0.00013654865,0.0002001588,0.000026562167,0.0000477695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094825355,0.00015052748,0.00030546452,0.00015056557,0.000024149305,0.0000037080285,0.00025507345,0.00007203178,0.000023992454],"category_scores_gemma":[0.0010070116,0.00014818495,0.000048331807,0.00022267833,0.0003675346,0.000038139766,0.00017944849,0.00025552406,0.0000020360837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091168455,0.00007123462,0.03349121,0.000021080381,7.982077e-7,0.00006811599,0.00017599254,0.0000033881972,0.96343166,0.00078265776,4.8335943e-7,0.0018621902],"study_design_scores_gemma":[0.00036634484,0.00007166227,0.021170877,0.000010798682,0.0000033496506,0.000012042081,0.00001832309,0.0008444632,0.96584415,0.011542826,0.000011536577,0.00010364988],"about_ca_topic_score_codex":0.00012497035,"about_ca_topic_score_gemma":0.0000018573209,"teacher_disagreement_score":0.028960085,"about_ca_system_score_codex":0.000014874808,"about_ca_system_score_gemma":0.000026207837,"threshold_uncertainty_score":0.60428065},"labels":[],"label_agreement":null},{"id":"W2170332083","doi":"10.1007/978-1-4939-2877-4_15","title":"Selection and Validation of Spacer Sequences for CRISPR-Cas9 Genome Editing and Transcription Regulation in Bacteria","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Université de Sherbrooke","keywords":"CRISPR; Palindrome; Cas9; Computational biology; Genome editing; Genome; Biology; Guide RNA; Transcription (linguistics); Genetics; Selection (genetic algorithm); RNA; Bacterial genome size; Gene; Computer science; Artificial intelligence","score_opus":0.02778354652393486,"score_gpt":0.4099826457558692,"score_spread":0.3821990992319343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2170332083","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47975025,0.00043618897,0.5195777,0.0000368776,0.000060427334,0.00012065316,0.0000027113715,0.0000022414104,0.000012974819],"genre_scores_gemma":[0.6480275,0.000050190843,0.3517777,0.000012883389,0.000044480916,0.000023264167,0.000049908198,0.000007701417,0.0000063802627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991973,0.00021826489,0.00020117026,0.00023080563,0.000027576973,0.00012484862],"domain_scores_gemma":[0.999775,0.000019411162,0.00005443396,0.00007067904,0.000050969324,0.000029519657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086837687,0.00008746751,0.00013927974,0.00010483899,0.000012066921,0.0000065929,0.000030246354,0.00015578553,0.0000013469042],"category_scores_gemma":[0.00019933526,0.000092339746,0.000020559371,0.00008709137,0.000039740742,0.0000045782704,0.000019782443,0.00004474932,3.4484536e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004019004,0.000007723117,0.0033423752,0.000029970213,0.000007592451,1.7648624e-7,0.00014401722,0.0011017462,0.9917778,0.0001461567,0.0000013735535,0.003400918],"study_design_scores_gemma":[0.0005523274,0.00024611584,0.007402843,0.0000100075995,0.0000103897955,0.000010444415,0.000108046945,0.0022076555,0.98688465,0.0019690082,0.0005005627,0.00009793193],"about_ca_topic_score_codex":0.000032848926,"about_ca_topic_score_gemma":0.000036439455,"teacher_disagreement_score":0.16827723,"about_ca_system_score_codex":0.000013336048,"about_ca_system_score_gemma":0.000017584018,"threshold_uncertainty_score":0.37655056},"labels":[],"label_agreement":null},{"id":"W2173164918","doi":"10.1007/978-1-4939-3289-4_8","title":"Companion Protease Inhibitors for the In Situ Protection of Recombinant Proteins in Plants","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Medicago (Canada); Université Laval","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada","keywords":"Recombinant DNA; Protease; In situ; Biology; Chemistry; Biochemistry; Enzyme","score_opus":0.04786345672472964,"score_gpt":0.36938623060835707,"score_spread":0.32152277388362743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173164918","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4602035,0.00044527458,0.5367541,0.00031069134,0.00012771928,0.0020793926,0.000014729221,0.000004203211,0.000060428767],"genre_scores_gemma":[0.889308,0.000041152605,0.10912957,0.000058189788,0.000025972016,0.0013466026,0.00005847412,0.000013333324,0.000018753497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862206,0.00048463958,0.0003431896,0.00029340235,0.0000445926,0.00021210373],"domain_scores_gemma":[0.999543,0.000039425657,0.00009746277,0.00025296994,0.00003337432,0.000033779448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001399464,0.0001164513,0.00019697937,0.00010286428,0.000018272836,0.0000037348634,0.0001819037,0.00019522104,6.70434e-7],"category_scores_gemma":[0.00024719542,0.00008874899,0.000052077805,0.00016774975,0.0000785067,0.0000021475298,0.000048287424,0.00014066984,4.0946594e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017202801,0.00014202362,0.0018484462,0.000016591062,0.0000093045655,0.0000013595381,0.00007477795,0.00019596177,0.9832449,0.0003415716,0.000017620596,0.013935408],"study_design_scores_gemma":[0.0015884519,0.00035208958,0.0028750256,0.000030476464,0.000005069587,0.000009051745,0.00011315563,0.00046018648,0.9833545,0.003821391,0.0072499043,0.00014066303],"about_ca_topic_score_codex":0.0002758567,"about_ca_topic_score_gemma":0.00049859734,"teacher_disagreement_score":0.42910445,"about_ca_system_score_codex":0.000024812467,"about_ca_system_score_gemma":0.000085424654,"threshold_uncertainty_score":0.36190787},"labels":[],"label_agreement":null},{"id":"W2173178837","doi":"10.1007/978-1-4939-3289-4_13","title":"Liquid-Liquid Phase Separation of Oil Bodies from Seeds","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid metabolism and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sembiosys Genetics (Canada)","funders":"","keywords":"Oleosin; Organelle; Chromatography; Chemistry; Homogenization (climate); Oil droplet; Chemical engineering; Biology; Biochemistry; Emulsion; Gene","score_opus":0.03381702370773367,"score_gpt":0.4097850640190776,"score_spread":0.37596804031134395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2173178837","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7511605,0.003776419,0.24329412,0.00008327206,0.00038815048,0.00007327082,0.000043093693,0.0000127442145,0.0011684393],"genre_scores_gemma":[0.42055035,0.00026900764,0.577627,0.00045811097,0.00036924687,0.00004893235,0.00041100744,0.00003732616,0.00022903777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976021,0.0010893766,0.000460186,0.0004645515,0.00009550622,0.0002882698],"domain_scores_gemma":[0.9990288,0.000057172347,0.00016716385,0.00051001366,0.00013058269,0.000106281426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011716344,0.00022115726,0.00041046523,0.00012312613,0.000024489605,0.0000071231666,0.0002987446,0.00038815002,0.000018412866],"category_scores_gemma":[0.00079583924,0.00019735385,0.00012237551,0.0001276786,0.00018772304,0.0000045738525,0.0001943897,0.00010578123,0.000006350314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00087828975,0.00015287525,0.00019855709,0.000010049123,0.00007020031,0.0000035023515,0.00017214016,0.000013895462,0.98393655,0.00020047885,0.00008097975,0.014282469],"study_design_scores_gemma":[0.0011482923,0.00081064325,0.000025771593,0.0000096718095,0.000034632143,0.0000026316588,0.00008614778,0.000025549723,0.9251232,0.00020429662,0.07232119,0.00020797699],"about_ca_topic_score_codex":0.00009503929,"about_ca_topic_score_gemma":0.000029118679,"teacher_disagreement_score":0.33433285,"about_ca_system_score_codex":0.0000140275715,"about_ca_system_score_gemma":0.00013869598,"threshold_uncertainty_score":0.8047856},"labels":[],"label_agreement":null},{"id":"W2174104590","doi":"10.1007/978-1-4939-0956-8_8","title":"G Protein-Coupled Receptor Mutations and Human Genetic Disease","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Regulation of Appetite and Obesity","field":"Neuroscience","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital du Sacré-Cœur de Montréal; University of Toronto; Royal Victoria Hospital; McGill University Health Centre; Surrey Place Centre; McGill University; Canada Research Chairs","funders":"Canadian Institutes of Health Research","keywords":"GNRHR; G protein-coupled receptor; Biology; Melanocortin; Receptor; Endocrinology; Internal medicine; Genetics; Gonadotropin-releasing hormone; Medicine; Hormone; Luteinizing hormone","score_opus":0.05714460746486543,"score_gpt":0.43894880979366463,"score_spread":0.3818042023287992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2174104590","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007540322,0.7432513,0.25425592,0.000047959948,0.0001365239,0.0013166993,0.000017872624,0.00004413065,0.00017554047],"genre_scores_gemma":[0.00001976154,0.6557777,0.34322518,0.00015429613,0.00007350398,0.00036655692,0.000056121193,0.000051603445,0.00027527756],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99459046,0.0037634375,0.000523229,0.00076691003,0.00008214112,0.00027382968],"domain_scores_gemma":[0.99871343,0.0003893045,0.0002658403,0.00047858886,0.000020293597,0.00013253625],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00065017823,0.000304182,0.00091782736,0.0002837831,0.000109076725,0.000031353156,0.00031696583,0.00028744186,0.00006985879],"category_scores_gemma":[0.0012854859,0.00025916405,0.00019963586,0.00031661976,0.00030644354,0.000017705985,0.00015819426,0.0002825456,0.000030975534],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005798169,0.00007208126,0.00002986093,0.003255735,0.000016664644,0.00004294945,0.00001601382,0.000005918202,0.15077215,0.02639217,0.000006247755,0.8193844],"study_design_scores_gemma":[0.00020466666,0.000089864145,0.00005085288,0.001012098,0.00011741453,0.000012140589,7.6403245e-7,0.00009479524,0.004192948,0.012291702,0.98149437,0.00043840788],"about_ca_topic_score_codex":0.000008893053,"about_ca_topic_score_gemma":0.000001603038,"teacher_disagreement_score":0.9814881,"about_ca_system_score_codex":0.000035091292,"about_ca_system_score_gemma":0.000081474514,"threshold_uncertainty_score":0.99998605},"labels":[],"label_agreement":null},{"id":"W2174890166","doi":"10.1007/978-1-4939-3136-1_12","title":"DNA Microarray-Based Diagnostics","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Computational biology; Microarray; Biology; Genetics; Gene; Gene expression","score_opus":0.07309097647888205,"score_gpt":0.4705204048650941,"score_spread":0.3974294283862121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2174890166","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000026712469,0.67766064,0.32090878,0.00002559584,0.00045103126,0.0004008899,0.000033562555,0.00001316389,0.00050366815],"genre_scores_gemma":[7.8942554e-7,0.76314217,0.23491654,0.00028629915,0.00014977703,0.0003276041,0.00091470894,0.00007400582,0.00018811243],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951244,0.0026800658,0.0006867852,0.00097077654,0.00010263195,0.0004353378],"domain_scores_gemma":[0.9981932,0.00010291611,0.00036273792,0.0010758322,0.000114943454,0.0001503878],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00138101,0.0005126933,0.0011644434,0.00032740488,0.00003334514,0.000020192278,0.00065945287,0.0012604316,0.000024699713],"category_scores_gemma":[0.0008565038,0.00044822373,0.00042294356,0.00040962044,0.00016963709,0.000001022785,0.00022041445,0.00038064248,0.00002386789],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013559914,0.000075341406,0.000011294278,0.0007901312,0.00006323638,0.000011837828,0.0000053557005,0.000006313422,0.07791864,0.00018913473,0.002454383,0.9184608],"study_design_scores_gemma":[0.00032811164,0.0001473138,7.396434e-7,0.000511928,0.00012711844,0.000013477219,0.00000595143,0.000005418574,0.017546467,0.00033281805,0.9805104,0.00047022323],"about_ca_topic_score_codex":0.000005356471,"about_ca_topic_score_gemma":0.0000037795653,"teacher_disagreement_score":0.9780561,"about_ca_system_score_codex":0.000087120134,"about_ca_system_score_gemma":0.0007781927,"threshold_uncertainty_score":0.9997969},"labels":[],"label_agreement":null},{"id":"W2180913831","doi":"10.1007/978-1-61779-876-4_14","title":"Bioinformatics for Analysis of Poxvirus Genomes","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"National Institute of Allergy and Infectious Diseases; U.S. Public Health Service","keywords":"Genome; Genomics; Computational biology; DNA sequencing; Software; DNA microarray; Biology; Data science; Computer science; DNA; Genetics; Gene","score_opus":0.10174595549222122,"score_gpt":0.4364240006651559,"score_spread":0.3346780451729347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2180913831","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6760142,0.0067160884,0.31393576,0.0003404464,0.0001771966,0.00061808934,0.0009989273,0.000034372857,0.0011649333],"genre_scores_gemma":[0.069066934,0.00036515243,0.9299578,0.00023945588,0.000047499903,0.00007415138,0.00021101275,9.5117196e-7,0.000037014383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887025,0.00035297402,0.00025664436,0.00010881001,0.000058353035,0.00035296273],"domain_scores_gemma":[0.9988258,0.0009439348,0.00008463179,0.000054584918,0.000042826516,0.000048236667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014943806,0.0000857717,0.00034075443,0.000092180664,0.00003792093,0.0000043337213,0.00019367061,0.00009059334,0.00004826848],"category_scores_gemma":[0.0004939537,0.00003248483,0.00015569935,0.0008112554,0.00009273642,0.000030109033,0.00010525723,0.000058665322,0.0000018724509],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013949008,0.000034192664,0.013782479,0.0000062451354,0.00021963759,2.2188024e-7,0.000074135816,0.000008415423,0.89702964,0.0011628844,0.000017088374,0.087651104],"study_design_scores_gemma":[0.00040821583,0.0006417044,0.124741524,0.000010925917,0.0005487189,0.0000031081065,0.0006935604,0.0052172733,0.7697037,0.0051653683,0.09228855,0.0005773614],"about_ca_topic_score_codex":0.000070836395,"about_ca_topic_score_gemma":0.00006804666,"teacher_disagreement_score":0.6160221,"about_ca_system_score_codex":0.000014340994,"about_ca_system_score_gemma":0.000003671139,"threshold_uncertainty_score":0.13246928},"labels":[],"label_agreement":null},{"id":"W2181250762","doi":"10.1007/978-1-60327-136-3_3","title":"Construction of cDNA Libraries: Focus on Protists and Fungi","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Genome; cDNA library; Biology; Complementary DNA; Computational biology; Construct (python library); Genetics; Gene; Computer science","score_opus":0.01326196297625489,"score_gpt":0.3224792458863063,"score_spread":0.3092172829100514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2181250762","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4311034,0.002489709,0.56165427,0.0003514884,0.00016364215,0.00049377064,0.00003076503,0.000014047262,0.0036988768],"genre_scores_gemma":[0.44316536,0.00012105333,0.5562497,0.00036027364,0.0000325462,0.000009227046,0.000028268409,0.0000070566352,0.000026527061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988554,0.0004324584,0.00017822448,0.00032022494,0.00003874991,0.00017492582],"domain_scores_gemma":[0.9995858,0.000028605868,0.00007894711,0.00023669418,0.000026830223,0.000043094034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032452404,0.000124772,0.00019666895,0.00008608751,0.000029487586,0.0000063818325,0.00013834583,0.0002444942,0.0000090412805],"category_scores_gemma":[0.00015600986,0.00012375107,0.00005286084,0.00010501838,0.00020699807,0.0000023912423,0.0000752818,0.00010556491,9.0666884e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013761905,0.00004198687,0.010083959,0.000009806612,0.00002084743,0.0000058849027,0.000026371958,0.000004768401,0.8830943,0.03347329,0.000015717882,0.07308541],"study_design_scores_gemma":[0.0004683943,0.0009839426,0.010307726,0.000011725803,0.000008916709,0.000022437302,0.0000177004,0.0000107990045,0.9293538,0.05778713,0.00088871125,0.00013872188],"about_ca_topic_score_codex":0.000009382032,"about_ca_topic_score_gemma":0.0000017764022,"teacher_disagreement_score":0.07294669,"about_ca_system_score_codex":0.0000059345275,"about_ca_system_score_gemma":0.000031611733,"threshold_uncertainty_score":0.50464225},"labels":[],"label_agreement":null},{"id":"W2181579431","doi":"10.1007/978-1-4939-3061-6_8","title":"Molecular Aspects of Conifer Zygotic and Somatic Embryo Development: A Review of Genome-Wide Approaches and Recent Insights","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Forest Service; Natural Resources Canada","funders":"Agence Nationale de la Recherche","keywords":"Biology; Somatic embryogenesis; Transcriptome; Epigenetics; Genome; Somatic cell; Maternal to zygotic transition; Embryo; Computational biology; Gene; Genetics; Evolutionary biology; Gene expression; Zygote; Embryogenesis","score_opus":0.0740911834840633,"score_gpt":0.36927975699600374,"score_spread":0.29518857351194044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2181579431","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000295416,0.96589255,0.032327432,0.000025073236,0.000065541964,0.0008911354,0.000013760645,0.0000045271686,0.000484564],"genre_scores_gemma":[0.000026391395,0.9051769,0.09384063,0.00010377832,0.000021482838,0.00008742149,0.0006797599,0.000034717166,0.000028916078],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99638295,0.0016495328,0.00097391667,0.00063747814,0.00011445356,0.00024167978],"domain_scores_gemma":[0.99870676,0.000064309046,0.0005579744,0.00044215636,0.00012862698,0.00010020453],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001178548,0.00043969395,0.0018147541,0.00017851587,0.000024667504,0.000007379853,0.000265751,0.00062965136,0.000003680219],"category_scores_gemma":[0.0005873191,0.0003338496,0.00014110921,0.00023775207,0.0002403262,0.000002939772,0.00027355234,0.00019963905,7.151034e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015718804,0.00012316821,0.000012822493,0.07570031,0.0006634965,0.00004538195,0.00014755271,0.0000056081244,0.17017409,0.0012796881,0.00004367322,0.7517885],"study_design_scores_gemma":[0.0003406134,0.00020672915,0.0000055777823,0.0097643705,0.0005278835,0.00016280754,0.000014187359,0.0000055705927,0.051823795,0.00045264923,0.93618923,0.0005065903],"about_ca_topic_score_codex":0.000006042186,"about_ca_topic_score_gemma":0.0000137065,"teacher_disagreement_score":0.93614554,"about_ca_system_score_codex":0.00003114954,"about_ca_system_score_gemma":0.00054271397,"threshold_uncertainty_score":0.99991137},"labels":[],"label_agreement":null},{"id":"W2182232875","doi":"10.1007/978-1-62703-980-2_9","title":"Preparation of Yeast Whole Cell Splicing Extract","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia; University of British Columbia","funders":"","keywords":"RNA splicing; Spliceosome; Precursor mRNA; Intron; Minigene; Biology; Exonic splicing enhancer; Protein splicing; Alternative splicing; Messenger RNA; Prp24; Splicing factor; Cell biology; RNA; Computational biology; Gene; Genetics","score_opus":0.017815171789406864,"score_gpt":0.41107517807171345,"score_spread":0.3932600062823066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2182232875","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45420897,0.00023653616,0.5437145,0.000025801226,0.000042603122,0.00009557831,0.0000023786508,0.0000037934228,0.0016698256],"genre_scores_gemma":[0.6244798,0.00002664684,0.3747953,0.00010931148,0.000051335996,0.000018768646,0.00004420334,0.000016791459,0.0004578957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812114,0.0008956518,0.0002819654,0.0003469219,0.00006783769,0.00028646513],"domain_scores_gemma":[0.99933964,0.000046652804,0.000099665966,0.00039886514,0.00005631606,0.000058841546],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014028928,0.00012378326,0.00021228245,0.00010436214,0.000025870877,0.0000071221007,0.00021461422,0.00019833371,0.000010284981],"category_scores_gemma":[0.00045318945,0.00011783977,0.00008456844,0.00012879439,0.000090244765,0.0000023815214,0.00011486956,0.00012519253,0.0000050117333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056559293,0.00004191259,0.0018135367,0.000019541178,0.000010050695,0.0000013315488,0.000022008215,0.00022442792,0.9835388,0.00032067328,0.000030545507,0.013920617],"study_design_scores_gemma":[0.00038917136,0.00044706903,0.00069017435,0.000009492551,0.0000049672394,0.000004736347,0.000019583278,0.0018096672,0.9895103,0.00067546923,0.006318481,0.00012089586],"about_ca_topic_score_codex":0.00005734473,"about_ca_topic_score_gemma":0.000021874066,"teacher_disagreement_score":0.17027077,"about_ca_system_score_codex":0.000010597833,"about_ca_system_score_gemma":0.00003926852,"threshold_uncertainty_score":0.48053667},"labels":[],"label_agreement":null},{"id":"W2183364729","doi":"10.1007/978-1-62703-845-4_28","title":"High-Purity Neutrophil Isolation from Human Peripheral Blood and Saliva for Transcriptome Analysis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Saliva; Rheumatoid arthritis; Periodontitis; Chronic bronchitis; Immunology; Transcriptome; Medicine; Inflammatory bowel disease; Peripheral blood; Biology; Disease; Pathology; Internal medicine; Gene; Genetics; Gene expression","score_opus":0.011701828240088525,"score_gpt":0.3283818021576775,"score_spread":0.31667997391758895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2183364729","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52620596,0.0010971469,0.4722318,0.00014851977,0.00012625178,0.0001342195,0.000011221147,0.000019690908,0.000025193523],"genre_scores_gemma":[0.82368,0.000040368206,0.17534535,0.00018034561,0.000030560415,0.000055946035,0.00058477646,0.000014081509,0.000068595946],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963941,0.0025239033,0.00040353934,0.00039128723,0.000014176186,0.00027302504],"domain_scores_gemma":[0.9992109,0.0003251818,0.000119110366,0.0002856231,0.000044337346,0.000014840652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011357658,0.00017411864,0.00049339706,0.00028675393,0.00012203163,0.000012951059,0.00014330943,0.0004233379,0.00010506168],"category_scores_gemma":[0.00019258643,0.00016491784,0.0001595753,0.0002178276,0.00015924037,0.0000427446,0.00003604406,0.00019403182,0.0000031378388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001598543,0.000044587272,0.0026697712,0.000006880512,0.00053165195,7.6414636e-7,0.00021853458,0.000027923557,0.9804327,0.009699994,0.000004578285,0.0062027937],"study_design_scores_gemma":[0.0026479585,0.0004962731,0.02133494,0.000006827269,0.00071721507,0.0000049502637,0.000033964694,0.00025619124,0.948445,0.021468522,0.0043179714,0.0002701929],"about_ca_topic_score_codex":0.0003729254,"about_ca_topic_score_gemma":0.00005363768,"teacher_disagreement_score":0.29747403,"about_ca_system_score_codex":0.00001780774,"about_ca_system_score_gemma":0.00001120772,"threshold_uncertainty_score":0.67251545},"labels":[],"label_agreement":null},{"id":"W2186745986","doi":"10.1007/978-1-61779-452-0_22","title":"A Neuron-Astrocyte Co-Culture System to Investigate Astrocyte-Secreted Factors in Mouse Neuronal Development","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal General Hospital","funders":"","keywords":"Astrocyte; Neuron; Biology; Neuroscience; Hippocampal formation; Cell biology; Secretion; Genetically modified mouse; In vitro; Biological neural network; Embryonic stem cell; Cell culture; Transgene; Central nervous system; Endocrinology; Genetics; Gene","score_opus":0.07301017265416743,"score_gpt":0.34925833257653766,"score_spread":0.27624815992237023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2186745986","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70528615,0.0000055581604,0.29333693,0.000035322828,0.0003348826,0.0004825537,0.000011080934,0.00013596621,0.00037160222],"genre_scores_gemma":[0.4547588,0.000005781842,0.5419947,0.0027372034,0.000025314148,0.0001640195,0.000020622647,0.000073371004,0.0002201977],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9944968,0.0029481614,0.0007397101,0.0010031355,0.00021273158,0.0005994225],"domain_scores_gemma":[0.9989502,0.00014020943,0.00018414234,0.000422164,0.000038577702,0.0002646978],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00060734065,0.00038622762,0.00042418545,0.0005712138,0.000103192804,0.000036858313,0.00054573175,0.00018695864,0.00004209722],"category_scores_gemma":[0.0009455114,0.00035805174,0.00007720428,0.00064633467,0.00009557273,0.00008627288,0.00019267887,0.0004707746,0.00005351251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073188436,0.000038728813,0.0005814337,0.00001632061,0.00000227175,0.000105800646,0.0008388694,0.00023543279,0.9891506,0.008508936,0.0000065562044,0.0004418533],"study_design_scores_gemma":[0.0005473244,0.00025138698,0.0008940822,0.0000146592165,0.0000030032106,0.000027260074,0.000055668406,0.000735964,0.9952295,0.00011039776,0.001835534,0.0002952169],"about_ca_topic_score_codex":0.000015044728,"about_ca_topic_score_gemma":0.00002046345,"teacher_disagreement_score":0.25052732,"about_ca_system_score_codex":0.000118333206,"about_ca_system_score_gemma":0.00010835523,"threshold_uncertainty_score":0.99988717},"labels":[],"label_agreement":null},{"id":"W2187201160","doi":"10.1007/978-1-62703-511-8_3","title":"Bone Marrow Stem Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Mesenchymal stem cell; Cell biology; Stem cell; Embryonic stem cell; Stem cell transplantation for articular cartilage repair; Clinical uses of mesenchymal stem cells; Bone marrow; In vitro; Biology; Adult stem cell; Chemistry; Immunology; Endothelial stem cell; Biochemistry","score_opus":0.052316621609057805,"score_gpt":0.4294919715245911,"score_spread":0.3771753499155333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2187201160","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23378977,0.0022804413,0.73653877,0.001699831,0.00035175847,0.0014307306,0.000002093244,0.00006428636,0.02384231],"genre_scores_gemma":[0.0325804,0.00006753989,0.9607531,0.0009101564,0.000053495016,0.00015944186,0.000006304632,0.000036839643,0.0054327273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970498,0.001510783,0.00034721996,0.0004146174,0.00014653575,0.0005310231],"domain_scores_gemma":[0.99883133,0.00031674697,0.00005310261,0.00051258755,0.00009640844,0.00018982992],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016907892,0.00015832462,0.00044733242,0.00024866086,0.000022742308,0.000011810715,0.00016957284,0.00026369895,0.0013504805],"category_scores_gemma":[0.00022791843,0.00012787012,0.00010048304,0.00035340557,0.00014762311,0.000019466846,0.0001607633,0.00040238176,0.00044061153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021667183,0.00005044293,0.0031549914,0.000047595782,0.000020107316,0.00013946451,0.00003024473,0.0000017241755,0.9181034,0.0007311032,0.00027363608,0.07742565],"study_design_scores_gemma":[0.00079896796,0.00033907488,0.0010510238,0.000029392946,0.000013371635,0.0000703157,0.000058281224,0.0005859625,0.9791174,0.0028480631,0.014928816,0.00015935439],"about_ca_topic_score_codex":0.0001926888,"about_ca_topic_score_gemma":0.0000031382751,"teacher_disagreement_score":0.22421432,"about_ca_system_score_codex":0.00007490635,"about_ca_system_score_gemma":0.000065980865,"threshold_uncertainty_score":0.99956244},"labels":[],"label_agreement":null},{"id":"W2187283908","doi":"10.1007/978-1-59745-188-8_8","title":"Application of Microarrays for DNA Methylation Profiling","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Addiction and Mental Health","funders":"","keywords":"DNA methylation; DNA microarray; Methylated DNA immunoprecipitation; Biology; Bisulfite sequencing; DNA; Methylation; Molecular biology; Restriction enzyme; Computational biology; Genetics; Gene; Gene expression","score_opus":0.025759848442396007,"score_gpt":0.3808443597805903,"score_spread":0.3550845113381943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2187283908","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27024627,0.001420409,0.7276692,0.000025521465,0.000071517425,0.00037341262,0.000009420082,0.00000516201,0.00017908601],"genre_scores_gemma":[0.3008472,0.00012611828,0.698588,0.000038557057,0.000046440215,0.00011379056,0.00020074866,0.000017665947,0.000021436439],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986405,0.00037678648,0.00037470995,0.00036772393,0.000046361034,0.0001939524],"domain_scores_gemma":[0.99928105,0.000072506955,0.0001717167,0.00031420993,0.00012883267,0.000031667558],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095917087,0.00012719531,0.00021426078,0.00011292294,0.000041636966,0.0000020732823,0.00014537998,0.00026258934,0.0000016174903],"category_scores_gemma":[0.0004206125,0.00013116836,0.00010679003,0.00015410132,0.00010725107,0.0000017645847,0.00005035301,0.00006226536,5.580134e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046814814,0.00003693122,0.006731045,0.00001899465,0.00001841006,2.7859653e-7,0.000028059296,0.00032183115,0.9749875,0.0014561524,0.0000023518871,0.016351607],"study_design_scores_gemma":[0.00043749015,0.0002220587,0.0010503947,0.000002729714,0.000010096054,0.0000021937867,0.000010773972,0.0008859263,0.98745483,0.006109341,0.0036804576,0.00013370074],"about_ca_topic_score_codex":0.000011934489,"about_ca_topic_score_gemma":0.0000041982057,"teacher_disagreement_score":0.030600935,"about_ca_system_score_codex":0.000012807847,"about_ca_system_score_gemma":0.000048839982,"threshold_uncertainty_score":0.53488904},"labels":[],"label_agreement":null},{"id":"W2189661376","doi":"10.1007/978-1-61779-139-0_19","title":"Characterizing Immune Receptors from New Genome Sequences","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Genome; Biology; Computational biology; Gene; Genetics; Immune system; Immune receptor; Receptor; Human genome; Evolutionary biology","score_opus":0.03712700350715366,"score_gpt":0.316926499462028,"score_spread":0.27979949595487436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189661376","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5406728,0.006598043,0.44603866,0.00021380097,0.0023345065,0.00026629074,0.00004675791,0.00011126116,0.0037179058],"genre_scores_gemma":[0.16281012,0.00034395355,0.8338682,0.00086804444,0.000077489734,0.000019746978,0.00026762695,0.000042270105,0.0017025254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976936,0.0010386201,0.00038489487,0.00042700718,0.0000116335095,0.00044427352],"domain_scores_gemma":[0.9993617,0.00013368505,0.00015624598,0.000303997,0.000018933428,0.000025427462],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004914886,0.000225193,0.00046254514,0.00014777681,0.00006856578,0.000008803425,0.00036435438,0.00040477727,0.0022093907],"category_scores_gemma":[0.00011179509,0.0002029231,0.00013145583,0.00014007148,0.00033345813,0.00006442333,0.00017074189,0.00036591987,0.00016885332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006123607,0.000034970173,0.00094220997,0.000002845912,0.00009839479,0.000011573962,0.001081206,3.6114102e-7,0.980596,0.0013334206,0.000018205708,0.015819563],"study_design_scores_gemma":[0.0003918394,0.000118874115,0.0031502822,0.000018984269,0.000020223426,0.000017681508,0.00026050475,5.088821e-7,0.97394866,0.009423123,0.012393861,0.0002554375],"about_ca_topic_score_codex":0.004731839,"about_ca_topic_score_gemma":0.000029358047,"teacher_disagreement_score":0.38782957,"about_ca_system_score_codex":0.000031312604,"about_ca_system_score_gemma":0.000055520286,"threshold_uncertainty_score":0.9987027},"labels":[],"label_agreement":null},{"id":"W2189755142","doi":"10.1007/978-1-4939-3167-5_7","title":"Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Banana Cultivation and Research","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ontario Institute for Cancer Research; European Bioinformatics Institute; National Science Foundation","keywords":"Genome; Upload; Genome browser; Annotation; Biology; Phylogenetic tree; Resource (disambiguation); Visualization; Computational biology; Tree (set theory); World Wide Web; Genomics; Computer science; Gene; Genetics; Data mining","score_opus":0.20161394551299275,"score_gpt":0.44701741794464017,"score_spread":0.24540347243164742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2189755142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9676436,0.0010324339,0.03001234,0.00032565673,0.000018966535,0.00023696107,0.00007007284,0.000008960405,0.0006510142],"genre_scores_gemma":[0.706431,0.000044411205,0.2929088,0.00022912434,0.000022701828,0.000056984718,0.00022736662,8.190447e-7,0.00007879408],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988075,0.00064394757,0.00016121486,0.00019057022,0.000050475584,0.0001463105],"domain_scores_gemma":[0.9993688,0.00042415896,0.00005741699,0.000039258986,0.00005247161,0.000057915295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010583278,0.000063714826,0.00027579028,0.00006162346,0.000026612577,0.0000066811376,0.000112372756,0.000088903726,0.000011816041],"category_scores_gemma":[0.00014225079,0.000024453504,0.000058981055,0.00045270438,0.00011055824,0.0000087419685,0.000053507014,0.00005570285,2.6835323e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059477377,0.00003944438,0.007988651,0.0000026409016,0.00012321334,0.0000014292182,0.00036117327,0.00003967498,0.8878927,0.0031207479,0.00002885541,0.100341976],"study_design_scores_gemma":[0.0024283305,0.0029570013,0.25496364,0.000029179097,0.00031450597,0.0000098489945,0.010294809,0.017571583,0.5155413,0.03283463,0.16216967,0.000885495],"about_ca_topic_score_codex":0.000095728865,"about_ca_topic_score_gemma":0.00013398723,"teacher_disagreement_score":0.3723514,"about_ca_system_score_codex":0.000009327546,"about_ca_system_score_gemma":0.000006630606,"threshold_uncertainty_score":0.09971849},"labels":[],"label_agreement":null},{"id":"W2190824189","doi":"10.1007/978-1-61779-523-7_9","title":"Miniaturized Assays of Angiogenesis In Vitro","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; National Institutes of Health; National Institute of Biomedical Imaging and Bioengineering; McMaster University","keywords":"Angiogenesis; In vitro; Cell biology; Neovascularization; Explant culture; Sprouting angiogenesis; Chemistry; Biology; Biomedical engineering; Medicine; Cancer research; Biochemistry","score_opus":0.03315972556261026,"score_gpt":0.3649108220297384,"score_spread":0.33175109646712814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2190824189","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6580114,0.0065174527,0.3313009,0.00003468153,0.00028531897,0.00027717714,0.000027491216,0.0000093879235,0.0035362057],"genre_scores_gemma":[0.33160523,0.00020909283,0.66776156,0.00021636004,0.000034810335,0.000056673918,0.000037908092,0.000026172804,0.000052172934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979381,0.0007966534,0.0004258987,0.0004505217,0.00005399726,0.00033480473],"domain_scores_gemma":[0.99929625,0.000037047346,0.00012881863,0.0004381137,0.00005146066,0.000048330516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010023748,0.00018867779,0.00037204905,0.00019953256,0.000012770515,0.0000020490986,0.00030211444,0.00037280185,0.000048601334],"category_scores_gemma":[0.00020233491,0.00017975559,0.00021075204,0.0002783964,0.00014984264,0.0000017211321,0.00015239498,0.00008029256,0.0000018828355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002794075,0.00009894489,0.009179138,0.000011860216,0.000045509736,0.000011211591,0.00006301265,0.0000033519566,0.97901434,0.00035473992,0.000017512582,0.010920997],"study_design_scores_gemma":[0.000640847,0.00016195739,0.0045094313,0.000008153772,0.0000148337995,0.0000066430634,0.000035438243,0.000017626428,0.9911899,0.0010375478,0.0021813402,0.0001962936],"about_ca_topic_score_codex":0.00014718536,"about_ca_topic_score_gemma":0.000028558467,"teacher_disagreement_score":0.33646065,"about_ca_system_score_codex":0.000017275317,"about_ca_system_score_gemma":0.00006284021,"threshold_uncertainty_score":0.73302203},"labels":[],"label_agreement":null},{"id":"W2191209888","doi":"10.1007/978-1-60761-454-8_1","title":"Functional Glycomics and Glycobiology: An Overview","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Glycomics; Glycobiology; Glycan; Glycome; Glycoconjugate; Glycoprotein; Biology; Computational biology; Biochemistry","score_opus":0.12339613416623661,"score_gpt":0.4967638439135974,"score_spread":0.3733677097473608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2191209888","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000045388075,0.915306,0.08325918,0.000039553488,0.0002160046,0.0007366533,0.00004277244,0.000019781395,0.00033467097],"genre_scores_gemma":[0.0000021080132,0.84107,0.1567302,0.0003388848,0.00017354843,0.00014235129,0.0012715594,0.00005822905,0.00021312149],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99376315,0.0035689876,0.00073522166,0.0012309013,0.00010522464,0.00059648626],"domain_scores_gemma":[0.9985046,0.00010681236,0.0002397196,0.00086784235,0.00008647444,0.00019458945],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017300332,0.00058977236,0.0013876285,0.00040429624,0.00007856222,0.00003740012,0.00048227707,0.0015300371,0.0000733633],"category_scores_gemma":[0.0005164694,0.00051740726,0.000350568,0.00036473622,0.00027979535,0.000004596371,0.0003774362,0.00066953327,0.000017782246],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004139235,0.000084285595,0.000015147735,0.0006433289,0.00009203951,0.000020801443,0.000003802172,0.000002580347,0.012039651,0.003095101,0.000085715044,0.98387617],"study_design_scores_gemma":[0.00048504546,0.00061778777,0.000020341775,0.0003274113,0.000084484695,0.00021689186,0.0000040827176,0.000017398666,0.00089961826,0.002390117,0.99439144,0.00054537307],"about_ca_topic_score_codex":0.000020480149,"about_ca_topic_score_gemma":0.000026821,"teacher_disagreement_score":0.99430573,"about_ca_system_score_codex":0.000052107287,"about_ca_system_score_gemma":0.00030665868,"threshold_uncertainty_score":0.9997662},"labels":[],"label_agreement":null},{"id":"W2195725813","doi":"10.1007/978-1-61779-005-8_3","title":"High Resolution Fluorescent In Situ Hybridization in Drosophila","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Biology; Multicellular organism; RNA; In situ hybridization; Drosophila melanogaster; Cell biology; Gene expression; Computational biology; Gene; Molecular biology; Genetics","score_opus":0.01979249181393566,"score_gpt":0.32535221045620605,"score_spread":0.3055597186422704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2195725813","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82893884,0.0006162415,0.16907811,0.0000808994,0.00025290472,0.00026267883,0.0000028545708,0.000008788151,0.0007587022],"genre_scores_gemma":[0.71033984,0.000117865755,0.28901866,0.00018170824,0.000024785133,0.000043780634,0.00023414144,0.00001269994,0.000026497091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977043,0.0010149829,0.00040995656,0.00050113245,0.00004222622,0.000327361],"domain_scores_gemma":[0.99958146,0.000016633217,0.00008417956,0.00025457417,0.000027458893,0.00003572684],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010722642,0.00017155429,0.00022161506,0.0002623421,0.000021492526,0.0000032103521,0.00017092822,0.00040478422,0.000014198715],"category_scores_gemma":[0.0001981343,0.00017828404,0.000046828252,0.0003061442,0.000118092954,0.000004214291,0.00013109048,0.00015150869,0.000005509674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001472669,0.00009700557,0.04727111,0.000006176847,0.000009159667,0.000017718477,0.00007338422,0.0001177541,0.94222945,0.0019382003,0.000008441015,0.00808435],"study_design_scores_gemma":[0.00073560793,0.00014988732,0.15835522,0.000015013007,0.000003002463,0.000010827949,0.000019485251,0.00006237533,0.8323327,0.007714789,0.0004039919,0.00019715002],"about_ca_topic_score_codex":0.00011669815,"about_ca_topic_score_gemma":0.0003949643,"teacher_disagreement_score":0.11994056,"about_ca_system_score_codex":0.00006072503,"about_ca_system_score_gemma":0.000050668383,"threshold_uncertainty_score":0.7270212},"labels":[],"label_agreement":null},{"id":"W2196213277","doi":"10.1007/978-1-61779-885-6_31","title":"MSQuant: A Platform for Stable Isotope-Based Quantitative Proteomics","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Quantitative proteomics; Stable isotope labeling by amino acids in cell culture; Proteomics; Computer science; Protein expression; Computational biology; Data science; Chemistry; Biology; Biochemistry","score_opus":0.058196044881210704,"score_gpt":0.4416440570197036,"score_spread":0.3834480121384929,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2196213277","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017459823,0.00033404294,0.9798908,0.000115159535,0.000032453572,0.00068463915,0.00006562516,0.00007688566,0.0013405693],"genre_scores_gemma":[0.008295442,0.000012790838,0.98885465,0.00020481346,0.000029447743,0.0024255493,0.000074205964,0.000035545007,0.00006753672],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988755,0.00007101618,0.00029075207,0.0002773678,0.000035639692,0.00044972874],"domain_scores_gemma":[0.99906075,0.00033131643,0.00013616888,0.00035593,0.00005166107,0.0000641751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078363466,0.00016549535,0.00025937485,0.000072629606,0.00006733618,0.000008163882,0.00021957113,0.00024078795,0.000053972126],"category_scores_gemma":[0.0003466099,0.00015945677,0.00009296087,0.00014457233,0.00009123185,0.000047697104,0.00006246414,0.00021103228,0.000003058503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058766258,0.00007317737,0.00059841684,0.000042549815,0.000010080053,3.2933167e-7,0.000042155396,0.000059537866,0.8481197,0.14761126,0.0000072738944,0.0033767642],"study_design_scores_gemma":[0.00038340947,0.00005438157,0.000004331375,0.000014312226,0.000009422195,0.0000018692756,0.000040877207,0.002808065,0.8983053,0.078442566,0.019747935,0.00018756234],"about_ca_topic_score_codex":0.000020216894,"about_ca_topic_score_gemma":0.0000024978146,"teacher_disagreement_score":0.06916869,"about_ca_system_score_codex":0.00008389852,"about_ca_system_score_gemma":0.000041557494,"threshold_uncertainty_score":0.65024585},"labels":[],"label_agreement":null},{"id":"W2197540239","doi":"10.1007/978-1-4939-3170-5_16","title":"Analysis of Sphingolipid Synthesis and Transport by Metabolic Labeling of Cultured Cells with [3H]Serine","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sphingolipid Metabolism and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Sphingolipid; Ceramide; Sphingomyelin; Biosynthesis; Golgi apparatus; Serine; Endoplasmic reticulum; Biochemistry; Ceramide synthase; Phosphocholine; Biology; Chemistry; Cell biology; Enzyme; Phospholipid; Membrane","score_opus":0.013639354622459044,"score_gpt":0.3211916325548382,"score_spread":0.30755227793237916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2197540239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6565769,0.005541822,0.3375484,0.000016889311,0.000054238808,0.00011256655,0.000053709216,0.000005413952,0.000090104724],"genre_scores_gemma":[0.52045095,0.0005484631,0.47873923,0.00007751899,0.000029563469,0.000019617253,0.0000873013,0.000025204687,0.000022152952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812543,0.0005323916,0.0004925964,0.00046685745,0.000112127644,0.0002706096],"domain_scores_gemma":[0.99905294,0.00006261177,0.00023550719,0.0003912982,0.0001468394,0.0001108052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001349541,0.00023135639,0.0008433509,0.00027284565,0.00001747909,0.0000041225267,0.00023075433,0.00024231825,0.000007041787],"category_scores_gemma":[0.00027016443,0.00018927263,0.00015719296,0.00068131235,0.00021440069,0.0000042013235,0.000068780035,0.00010526281,1.1181635e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015839297,0.00007251853,0.011828931,0.000024008928,0.0008486848,0.0000023375396,0.00014246235,0.0009649644,0.9840586,0.0001716985,0.000004882817,0.0017224839],"study_design_scores_gemma":[0.0006764925,0.00014307097,0.00062630326,0.000011924391,0.0009968248,0.0000036565111,0.00014078469,0.00031319412,0.9947815,0.00005380213,0.0020422388,0.0002102371],"about_ca_topic_score_codex":0.00027358686,"about_ca_topic_score_gemma":0.000051094434,"teacher_disagreement_score":0.14119081,"about_ca_system_score_codex":0.0000052717096,"about_ca_system_score_gemma":0.0000558397,"threshold_uncertainty_score":0.7718314},"labels":[],"label_agreement":null},{"id":"W2200636892","doi":"10.1007/978-1-60327-009-0_4","title":"Isolation and Culture of Term Human Cytotrophoblast Cells and In Vitro Methods for Studying Human Cytotrophoblast Cells’ Calcium Uptake","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Per- and polyfluoroalkyl substances research","field":"Environmental Science","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"Cytotrophoblast; Syncytiotrophoblast; Percoll; Trophoblast; Biology; Placenta; Cell culture; Flow cytometry; Syncytiotrophoblasts; Molecular biology; Calcium; Cell biology; In vitro; Chemistry; Internal medicine; Biochemistry; Fetus; Medicine","score_opus":0.03768710101937945,"score_gpt":0.4180992069637052,"score_spread":0.3804121059443258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2200636892","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6408975,0.0013502402,0.35698137,0.000023958137,0.000044193923,0.00042501962,0.000014706832,0.000008842157,0.0002541439],"genre_scores_gemma":[0.43323895,0.00008798812,0.5664781,0.00007183049,0.000015832215,0.00003004182,0.0000112814705,0.000012619309,0.000053369185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969258,0.001367446,0.00048623074,0.00061107066,0.000105126266,0.0005043476],"domain_scores_gemma":[0.9993073,0.00016371229,0.00013574382,0.00027527977,0.000015524793,0.00010243887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016605541,0.00024834293,0.0004909522,0.0001691689,0.00013245079,0.000023036948,0.00025933926,0.00026310605,0.000042591055],"category_scores_gemma":[0.00005786455,0.00022153316,0.00007334969,0.0003127145,0.00036827306,0.00006881063,0.00017860814,0.00031829637,0.0000010500614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010149481,0.00007634436,0.0026497017,0.000018793178,0.000008222484,0.000005472304,0.0008759318,0.00007911924,0.9133929,0.00004199128,0.000007054837,0.08274296],"study_design_scores_gemma":[0.0009413143,0.0005668526,0.019762915,0.000016737547,0.000012304806,0.00000400662,0.00013525017,0.0010517434,0.9729606,0.0035907286,0.00072106696,0.00023650947],"about_ca_topic_score_codex":0.00014140026,"about_ca_topic_score_gemma":0.00005823137,"teacher_disagreement_score":0.20949672,"about_ca_system_score_codex":0.00010937686,"about_ca_system_score_gemma":0.000008915263,"threshold_uncertainty_score":0.903386},"labels":[],"label_agreement":null},{"id":"W2200954913","doi":"10.1007/978-1-4939-1538-5_5","title":"Magnetic Nanoparticle and Magnetic Field Assisted siRNA Delivery In Vitro","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Transfection; Magnetic nanoparticles; Small interfering RNA; Gene silencing; Microbubbles; Gene delivery; Chemistry; HeLa; Biophysics; Nanotechnology; Materials science; In vitro; Nanoparticle; Biochemistry; Biology; Physics; Gene; Ultrasound","score_opus":0.012817618898678537,"score_gpt":0.32174458210051265,"score_spread":0.3089269632018341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2200954913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92022115,0.0039790166,0.07461465,0.00021416463,0.00015823722,0.00015674064,0.000002255644,0.000009148851,0.00064461376],"genre_scores_gemma":[0.83784103,0.00023151188,0.15979984,0.0018640272,0.000042014526,0.000045337787,0.000017776358,0.000018950564,0.00013953321],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978188,0.00090542017,0.00032592122,0.00051813567,0.00005000654,0.00038166236],"domain_scores_gemma":[0.9993441,0.00012401976,0.000051580217,0.00037097186,0.000036995723,0.000072341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000606727,0.00019434045,0.00027199855,0.00013977548,0.000026429392,0.000017078182,0.00021929877,0.0002907965,0.000022782173],"category_scores_gemma":[0.00048082965,0.00019309956,0.00006422373,0.00015677496,0.00011759671,0.0000033751605,0.00019647926,0.00016561271,0.0000061644187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011420925,0.0000457826,0.0033317797,0.000012419027,0.000007049534,0.00001386558,0.000022359856,0.0000067509145,0.86369646,0.00011685563,0.000021518965,0.13261098],"study_design_scores_gemma":[0.00080798875,0.0012688292,0.0047544073,0.00001465375,0.00001261722,0.000026138783,0.000026927539,0.00062151783,0.98822963,0.0015363543,0.0024593384,0.00024159598],"about_ca_topic_score_codex":0.000097375756,"about_ca_topic_score_gemma":0.000065644635,"teacher_disagreement_score":0.13236937,"about_ca_system_score_codex":0.000011751461,"about_ca_system_score_gemma":0.000025369658,"threshold_uncertainty_score":0.78743714},"labels":[],"label_agreement":null},{"id":"W220124562","doi":"10.1007/978-1-4939-2498-1_1","title":"Identification of Mouse T Follicular Helper Cells by Flow Cytometry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Flow cytometry; Immunology; Biology; Spleen; Population; Immunity; Cd4 t cell; Lymph; Follicular phase; T cell; B cell; Cell biology; Antibody; Immune system; Medicine; Pathology; Genetics","score_opus":0.018675103108749275,"score_gpt":0.32680988229069563,"score_spread":0.30813477918194637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W220124562","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35063407,0.010289959,0.63698995,0.0001299133,0.0012368541,0.00029689894,0.00006127644,0.000055455785,0.00030561487],"genre_scores_gemma":[0.72060645,0.0003699516,0.2696323,0.0005980338,0.000034679113,0.00013890062,0.0005979477,0.00009219416,0.007929549],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99547946,0.002672337,0.00076268864,0.0005461747,0.000038655722,0.00050068],"domain_scores_gemma":[0.9986766,0.00021054363,0.00028103899,0.0006526218,0.00014014605,0.00003902812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001949208,0.00026555033,0.0006131542,0.0003703831,0.00004550195,0.0000072052744,0.0005135708,0.00080244814,0.00012953614],"category_scores_gemma":[0.00041896684,0.00024395218,0.00015842516,0.0004486406,0.00049760804,0.00004172929,0.00020144867,0.00041377373,0.00022959233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088193745,0.00024732205,0.00044416543,0.000013509426,0.0001432426,0.0000070292936,0.00015563813,0.00003589469,0.9926885,0.0005523951,0.0011019455,0.004522207],"study_design_scores_gemma":[0.0014504613,0.00024459147,0.000011578057,0.000005789477,0.000037440666,0.000025918349,0.00015017176,0.000046611713,0.9752931,0.0013641176,0.021131394,0.00023884051],"about_ca_topic_score_codex":0.00011631281,"about_ca_topic_score_gemma":0.000003900692,"teacher_disagreement_score":0.36997235,"about_ca_system_score_codex":0.0000629818,"about_ca_system_score_gemma":0.00006742194,"threshold_uncertainty_score":0.99480814},"labels":[],"label_agreement":null},{"id":"W2210810321","doi":"10.1007/978-1-59745-396-7_4","title":"Analysis of Macrophage Phagocytosis: Quantitative Assays of Phagosome Formation and Maturation Using High-Throughput Fluorescence Microscopy","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Phagosome; Phagocytosis; Macrophage; Fluorescence microscope; Cell biology; Microscopy; Chemistry; Fluorescence; Biology; Nanotechnology; Materials science; Pathology; Biochemistry; Medicine; Physics; Optics; In vitro","score_opus":0.02748813669575205,"score_gpt":0.3984547025748298,"score_spread":0.3709665658790777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2210810321","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52389324,0.0034471247,0.4723603,0.000028540317,0.000086548214,0.00013723392,0.000023074053,0.000007638157,0.000016265856],"genre_scores_gemma":[0.6822252,0.000118373195,0.31749007,0.00003510185,0.0000023927298,0.0000039629913,0.00011527568,0.0000054665875,0.000004123771],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972321,0.0014829767,0.00070636225,0.0003082049,0.00003335493,0.00023704526],"domain_scores_gemma":[0.9989221,0.00017703002,0.0005011601,0.00026574713,0.00012141479,0.000012543853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095000834,0.00018066411,0.0007069289,0.00063424045,0.000054720982,0.000006525785,0.00014691282,0.0003136329,0.00002551012],"category_scores_gemma":[0.00020837558,0.00016764645,0.00013179227,0.00084833277,0.00026551797,0.00014795217,0.000051944786,0.0001580232,0.0000010159796],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020291097,0.000080230166,0.00096176023,0.000021339481,0.0003140976,9.566264e-7,0.0004705481,0.00029420748,0.9790853,0.005037206,0.0000013152323,0.013530092],"study_design_scores_gemma":[0.00075187196,0.00034684158,0.024367388,0.00003581997,0.0003704293,0.000008544257,0.000117899224,0.0039054502,0.9682334,0.0017079972,0.000015733176,0.00013862681],"about_ca_topic_score_codex":0.00012230627,"about_ca_topic_score_gemma":0.0000046007417,"teacher_disagreement_score":0.15833199,"about_ca_system_score_codex":0.000050203984,"about_ca_system_score_gemma":0.000026698566,"threshold_uncertainty_score":0.6836424},"labels":[],"label_agreement":null},{"id":"W2216716385","doi":"10.1007/978-1-59745-493-3","title":"Mass Spectrometry of Proteins and Peptides","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Pacific Northwest National Laboratory; Universität des Saarlandes; University of Toronto; Westfälische Wilhelms-Universität Münster; Genome British Columbia; Joint Genome Institute; U.S. Department of Energy; Stowers Institute for Medical Research; Washington State University; University of Wisconsin-Madison","keywords":"Mass spectrometry; Chemistry; Protein mass spectrometry; Chromatography; Computational biology; Tandem mass spectrometry; Biology","score_opus":0.015287707547181421,"score_gpt":0.3569810302576414,"score_spread":0.34169332271046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2216716385","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007906578,0.0016690594,0.41380095,0.0000726359,0.000008756547,0.00020486598,0.000030420468,0.000057777936,0.58407646],"genre_scores_gemma":[0.00019166293,0.000406713,0.94048405,0.00006027944,0.00005655356,0.00008745663,0.00008023797,0.000042205873,0.05859086],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99842757,0.00013646127,0.0004935759,0.000562978,0.00008794388,0.00029149713],"domain_scores_gemma":[0.9987625,0.00017078815,0.0003142309,0.0006554236,0.000040087634,0.000056982048],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005347189,0.00031476445,0.00071936025,0.00037799304,0.00002180184,0.000008882494,0.0003652603,0.000808315,0.0008409488],"category_scores_gemma":[0.00015894118,0.00031505452,0.00014713277,0.00019116337,0.00022362353,0.000009273766,0.00011927039,0.0006546736,0.0000015370949],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059847157,0.000031754324,0.000065250715,0.0001525282,0.000036151163,0.00001123448,0.0000059555227,2.906187e-7,0.82474047,0.16310826,0.00013492334,0.011707213],"study_design_scores_gemma":[0.00011528064,0.00008485866,0.000008032401,0.00007644479,0.000029117737,0.000012974555,0.0000026974583,0.000011382378,0.44781137,0.5215091,0.030113619,0.00022510713],"about_ca_topic_score_codex":0.000013867101,"about_ca_topic_score_gemma":0.0000018807922,"teacher_disagreement_score":0.5266831,"about_ca_system_score_codex":0.0001217866,"about_ca_system_score_gemma":0.000089521134,"threshold_uncertainty_score":0.99993014},"labels":[],"label_agreement":null},{"id":"W2223434318","doi":"10.1007/978-1-59745-352-3_15","title":"Mechanical Stretch-Induced Signal Transduction in Cultured Mesangial Cells","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph's Hospital; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"RHOA; Cell biology; Signal transduction; Extracellular matrix; Mesangial cell; MAPK/ERK pathway; Actin cytoskeleton; Focal adhesion; Cytoskeleton; Chemistry; Biology; Endocrinology; Kidney; Cell; Biochemistry","score_opus":0.03169101661123776,"score_gpt":0.3774619832520507,"score_spread":0.34577096664081297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2223434318","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7422202,0.0008818089,0.2556356,0.0003948168,0.0002594237,0.0003275753,0.0000065263553,0.000030568382,0.00024347549],"genre_scores_gemma":[0.5501405,0.00021787363,0.44903055,0.0003830176,0.000098767974,0.000039742412,0.00003125337,0.000019883293,0.00003839347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799144,0.00089233613,0.00034503278,0.0003664642,0.00010330557,0.00030142613],"domain_scores_gemma":[0.99955666,0.00006695157,0.00004737029,0.00018854154,0.00003653661,0.00010391303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048079502,0.00016616867,0.00043066722,0.00020295099,0.000026317424,0.0000029801195,0.000081065984,0.0002931902,0.00024412209],"category_scores_gemma":[0.00013774059,0.00013652066,0.00017205314,0.0003504388,0.00008779245,0.000021117805,0.000024762821,0.0003203015,0.0000067576602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025778054,0.00016374352,0.0007338534,0.000024437993,0.000024589091,0.00044869925,0.00019261762,0.000015929814,0.9848331,0.0005100353,0.000014912825,0.012780264],"study_design_scores_gemma":[0.0016769323,0.00050991087,0.002411226,0.00003962188,0.000040903236,0.00013317198,0.00010116976,0.0004749422,0.9910981,0.0028770065,0.0004619764,0.00017502051],"about_ca_topic_score_codex":0.00009111293,"about_ca_topic_score_gemma":0.000010136283,"teacher_disagreement_score":0.19339494,"about_ca_system_score_codex":0.000054491855,"about_ca_system_score_gemma":0.000074609045,"threshold_uncertainty_score":0.5567151},"labels":[],"label_agreement":null},{"id":"W2227464440","doi":"10.1007/978-1-60761-454-8_9","title":"N-Linked Glycoprotein Analysis Using Dual-Extraction Ultrahigh-Performance Liquid Chromatography and Electrospray Tandem Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sciex (Canada)","funders":"","keywords":"Chromatography; Glycoproteomics; Mass spectrometry; Shotgun proteomics; Glycopeptide; Tandem mass spectrometry; Chemistry; Glycan; Electrospray; Liquid chromatography–mass spectrometry; Proteomics; Glycoprotein; Biochemistry","score_opus":0.01322850179459017,"score_gpt":0.35469897745614437,"score_spread":0.3414704756615542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2227464440","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46044177,0.000439173,0.53714585,0.00007645911,0.000012285145,0.000105616826,0.000003970418,0.00010198257,0.00167291],"genre_scores_gemma":[0.4967118,0.00022357875,0.502893,0.00006316041,0.000030072106,0.000027581178,0.000023777719,0.000012400334,0.000014671413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980546,0.00020849728,0.00047736027,0.000646241,0.00011613895,0.00049711944],"domain_scores_gemma":[0.9990181,0.00009332632,0.00022838892,0.00052476465,0.000047105226,0.00008833556],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00073891546,0.00028413336,0.0005316502,0.0007911881,0.00011493735,0.000033454493,0.00020165206,0.00040092826,0.0003717562],"category_scores_gemma":[0.00008036808,0.00028731665,0.00018712047,0.0024674556,0.000109712935,0.00006158711,0.000031758074,0.0004974333,9.20252e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036178484,0.0000729007,0.0036077779,0.000015418535,0.0001454269,0.000010185941,0.000012305824,0.00003796028,0.9903939,0.0035354355,0.000001157036,0.002131374],"study_design_scores_gemma":[0.00026557344,0.0002572283,0.0023188265,0.000013344867,0.00019072663,0.000045356086,0.000012246767,0.00301242,0.9860516,0.0072012492,0.0003122956,0.00031908465],"about_ca_topic_score_codex":0.00003565026,"about_ca_topic_score_gemma":0.0000033011527,"teacher_disagreement_score":0.036270037,"about_ca_system_score_codex":0.000119223936,"about_ca_system_score_gemma":0.000024506036,"threshold_uncertainty_score":0.9999579},"labels":[],"label_agreement":null},{"id":"W2230236435","doi":"10.1007/978-1-59745-245-8_24","title":"Measurement of Phosphoinositide 3-Kinase and Its Products to Study Adipogenic Signal Transduction","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Adipogenesis; Adipose tissue; PI3K/AKT/mTOR pathway; Phosphoinositide 3-kinase; Inositol; Cell biology; Signal transduction; Kinase; Chemistry; Biology; Biochemistry; Receptor","score_opus":0.034057124641257354,"score_gpt":0.34077594206289735,"score_spread":0.30671881742164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2230236435","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7937535,0.14255983,0.06291726,0.000025367312,0.00016238597,0.0005420278,0.0000066315915,0.0000060069992,0.000026987029],"genre_scores_gemma":[0.92433983,0.0034846729,0.07168843,0.00022361505,0.000087950415,0.00012912451,0.000009804428,0.000024146553,0.000012429807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976761,0.0009528126,0.00035287984,0.00058973173,0.00013869052,0.00028982363],"domain_scores_gemma":[0.99930227,0.00000987461,0.00008094009,0.00031875636,0.00020120245,0.00008697191],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013456545,0.00019738277,0.00034383367,0.00011391979,0.000045904373,0.000003098774,0.000165077,0.00013861273,0.00002337053],"category_scores_gemma":[0.00027118853,0.0001920325,0.00006698009,0.00024348345,0.00007864478,0.0000026710188,0.000076379314,0.00010224823,0.0000012648545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012284356,0.00020026613,0.0017147143,0.000021364669,0.00009513814,0.000008587571,0.00019481113,0.00003654074,0.94125825,0.000040158036,0.000015653477,0.056291677],"study_design_scores_gemma":[0.00083529257,0.0008749555,0.0026915313,0.000009321268,0.000048124253,0.00001742971,0.00005264035,0.000007871078,0.9895344,0.000093702656,0.00563261,0.00020217293],"about_ca_topic_score_codex":0.000029996723,"about_ca_topic_score_gemma":0.000014816529,"teacher_disagreement_score":0.13907515,"about_ca_system_score_codex":0.000019414689,"about_ca_system_score_gemma":0.00009471803,"threshold_uncertainty_score":0.7830858},"labels":[],"label_agreement":null},{"id":"W2232673508","doi":"10.1007/978-1-61779-191-8_26","title":"In Vitro and In Vivo Methods for Assessing FcRn-Mediated Reverse Transcytosis Across the Blood–Brain Barrier","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Transcytosis; Blood–brain barrier; In vivo; In vitro; Cell biology; Tight junction; Endocytic cycle; Chemistry; Biology; Receptor; Endocytosis; Biochemistry; Neuroscience; Central nervous system","score_opus":0.06812269304719455,"score_gpt":0.4882371288300047,"score_spread":0.42011443578281016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2232673508","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65729874,0.0028525053,0.3337868,0.004077183,0.00017530684,0.001059643,0.000058292702,0.000016759544,0.0006747652],"genre_scores_gemma":[0.01812064,0.00024253903,0.97789085,0.0031587724,0.00003855974,0.00020040896,0.000016089914,0.000030246552,0.00030190664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951665,0.003174085,0.0004726694,0.00046897892,0.0000840541,0.00063375867],"domain_scores_gemma":[0.9971612,0.0023373642,0.00006493642,0.00027179343,0.000050104365,0.00011457391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0064349375,0.00021403345,0.00059050845,0.00024397128,0.00006482006,0.000013286362,0.00020133822,0.00030510468,0.00009000455],"category_scores_gemma":[0.0021967494,0.00014791708,0.00013003038,0.00047761854,0.00042464578,0.000048430265,0.00011027467,0.0005442779,8.825695e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083071296,0.0001067205,0.0055354154,0.000077663135,0.00005261325,0.000111178066,0.0013050517,5.518556e-7,0.9547567,0.0002601954,0.000014672705,0.036948558],"study_design_scores_gemma":[0.0023624569,0.000217084,0.003806139,0.000053884993,0.000036649766,0.00007172886,0.00036168573,0.00073434965,0.97366506,0.005094068,0.013398086,0.00019878052],"about_ca_topic_score_codex":0.00073184347,"about_ca_topic_score_gemma":0.00009756954,"teacher_disagreement_score":0.64410406,"about_ca_system_score_codex":0.000032309978,"about_ca_system_score_gemma":0.00008093244,"threshold_uncertainty_score":0.60318834},"labels":[],"label_agreement":null},{"id":"W2238446973","doi":"10.1007/978-1-59745-060-7_2","title":"Patterning Mouse and Human Embryonic Stem Cells Using Micro-contact Printing","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Embryonic stem cell; Cell biology; Stem cell; Biology; Materials science; Genetics","score_opus":0.04955494931979114,"score_gpt":0.38740536918318036,"score_spread":0.3378504198633892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2238446973","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57914233,0.00027952407,0.4202202,0.000008177823,0.00008412791,0.00009207569,8.962168e-7,0.000063034146,0.0001096005],"genre_scores_gemma":[0.42510948,0.000048041264,0.5746717,0.000041340176,0.000030863343,0.000009591828,0.0000017549779,0.00004531565,0.000041934163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980268,0.00068471226,0.00031505793,0.00034293503,0.00009295261,0.00053755974],"domain_scores_gemma":[0.9993018,0.0002589761,0.000043076692,0.00027579803,0.000023125345,0.000097257645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014207516,0.00018381632,0.00030840258,0.0002600426,0.00008999212,0.00001766806,0.00024793396,0.00022793413,0.00001962891],"category_scores_gemma":[0.000102322694,0.00018910231,0.000053168256,0.00021132275,0.0001481558,0.000027333319,0.00025565375,0.00055304973,0.000005051771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000016820616,0.000008644847,0.014681869,0.0000619465,0.00002458523,0.00008102796,0.0001171461,0.00034622743,0.9762495,0.00011227887,0.000002466199,0.008312631],"study_design_scores_gemma":[0.0003005337,0.000036751007,0.0017369662,0.00004059645,0.000005070189,0.0000594762,0.0000234664,0.008408763,0.98853207,0.00014199712,0.00049710134,0.00021718389],"about_ca_topic_score_codex":0.00007181738,"about_ca_topic_score_gemma":0.0000028056734,"teacher_disagreement_score":0.15445146,"about_ca_system_score_codex":0.0000937162,"about_ca_system_score_gemma":0.000020467083,"threshold_uncertainty_score":0.7711369},"labels":[],"label_agreement":null},{"id":"W2240756809","doi":"10.1007/978-1-59745-249-6_17","title":"Proteomic Analyses of Protein Complexes in the Wnt Pathway","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Wnt signaling pathway; Xenopus; Zebrafish; Cell biology; Signal transduction; Enhancer; Biology; Computational biology; Caenorhabditis elegans; Chemistry; Mass spectrometry; Pathway analysis; Biochemistry; Gene expression; Gene; Chromatography","score_opus":0.07244942441733553,"score_gpt":0.4055632053447772,"score_spread":0.33311378092744165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2240756809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8716885,0.0011757646,0.12522803,0.000113435155,0.000035214412,0.0007898146,0.000012759409,0.00000637534,0.0009501309],"genre_scores_gemma":[0.7381338,0.000050518232,0.26117992,0.00023891903,0.00003611765,0.00026501442,0.000041685544,0.00001616686,0.000037864647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99626726,0.0024682628,0.00044302107,0.00040322967,0.0000916256,0.00032660557],"domain_scores_gemma":[0.99923426,0.000049371283,0.00014561656,0.0004903723,0.000048222202,0.000032179665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015182963,0.00019708925,0.00034014182,0.00015011466,0.00004476481,0.0000045731877,0.0004802292,0.00024211704,0.000017439612],"category_scores_gemma":[0.00045522262,0.00014429356,0.00013797943,0.00031563643,0.00033192974,0.0000020073069,0.00014000018,0.00021953195,0.0000022975887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000632702,0.00010138637,0.002433095,0.000021839762,0.000021759904,0.000026936477,0.00014760686,0.00003509172,0.993824,0.0013441269,0.0000067543,0.0019741391],"study_design_scores_gemma":[0.00049118756,0.0003908645,0.0022137645,0.000017576174,0.0000047924214,0.000047574238,0.000048624104,0.000028059096,0.99178356,0.0032781486,0.0015277582,0.0001680714],"about_ca_topic_score_codex":0.00014884677,"about_ca_topic_score_gemma":0.000022728278,"teacher_disagreement_score":0.13595189,"about_ca_system_score_codex":0.000011937418,"about_ca_system_score_gemma":0.00010220555,"threshold_uncertainty_score":0.5884121},"labels":[],"label_agreement":null},{"id":"W22425738","doi":"10.1007/978-1-59745-181-9_8","title":"Titration of Human Coronaviruses, HCoV-229E and HCoV-OC43, by an Indirect Immunoperoxidase Assay","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"Institute of Infection and Immunity","keywords":"Titration; Virology; Coronavirus; Immunoperoxidase; Coronavirus disease 2019 (COVID-19); Biology; Chemistry; Medicine; Immunology; Pathology; Antibody; Monoclonal antibody","score_opus":0.0759583336563709,"score_gpt":0.4618858741803691,"score_spread":0.3859275405239982,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W22425738","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9272847,0.0026995703,0.06845661,0.00006173008,0.000053984695,0.00034182353,0.000011559442,0.000030359653,0.0010596382],"genre_scores_gemma":[0.8137711,0.00008072113,0.17493035,0.0109203,0.000049330363,0.00007835779,0.00007155049,0.000054250206,0.000043991236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969326,0.0017740321,0.00039037195,0.0004199345,0.00016441221,0.0003186441],"domain_scores_gemma":[0.9991256,0.00021036364,0.00009451163,0.00042777922,0.0000984425,0.00004328689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020611184,0.00018143911,0.00049297616,0.0002648535,0.000074803625,0.000008481256,0.00017807621,0.00028441337,0.000014931129],"category_scores_gemma":[0.00055928,0.0001616564,0.0000695179,0.00029963884,0.00045619343,0.000055361932,0.00009440979,0.00033953326,0.0000039027254],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014072664,0.00018563663,0.0572401,0.000031062074,0.000047355912,0.00008851599,0.00019244797,1.255206e-7,0.9306184,0.00028383886,0.00003264127,0.0111391395],"study_design_scores_gemma":[0.0013886458,0.00101414,0.00807493,0.000023570166,0.000025352454,0.00008860111,0.00003637056,0.00008330104,0.9787437,0.0006992305,0.009666902,0.0001552702],"about_ca_topic_score_codex":0.0006495997,"about_ca_topic_score_gemma":0.000041968884,"teacher_disagreement_score":0.113513574,"about_ca_system_score_codex":0.0000618157,"about_ca_system_score_gemma":0.00013495635,"threshold_uncertainty_score":0.6592156},"labels":[],"label_agreement":null},{"id":"W2245771638","doi":"10.1007/978-1-59745-512-1_11","title":"Salmonella Phages Examined in the Electron Microscope","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Siphoviridae; Myoviridae; Podoviridae; Bacteriophage; Microbiology; Biology; Salmonella; Proteobacteria; Virology; Bacteria; Genetics","score_opus":0.013751582330834624,"score_gpt":0.39169404012714865,"score_spread":0.377942457796314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2245771638","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7251862,0.00018127386,0.26783225,0.00022246654,0.00014439934,0.00017438733,0.000001184551,0.000009072913,0.006248742],"genre_scores_gemma":[0.59110755,0.000037590213,0.40694913,0.0015570738,0.00002352968,0.000017646826,0.000008057643,0.000013468309,0.0002859384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984683,0.0006769943,0.00021683102,0.00025438805,0.000033150372,0.00035037097],"domain_scores_gemma":[0.9995092,0.00020579179,0.000045139026,0.00021525193,0.0000024412777,0.000022142312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018393003,0.00010621679,0.00013006735,0.00006347728,0.00003430047,0.0000119092665,0.0002779814,0.000104815226,0.00030182555],"category_scores_gemma":[0.00009061637,0.0000790045,0.000042282307,0.0003140105,0.00013235673,0.000028634984,0.00009279068,0.00024782022,0.000049131577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016433232,0.000054651664,0.0020132437,9.392046e-7,0.0000025137956,0.000030504432,0.00019047041,0.000010203948,0.98101234,0.00010205876,0.000040538827,0.016526107],"study_design_scores_gemma":[0.00020732915,0.000095748306,0.10418912,0.000003902331,0.0000043726177,0.000041486117,0.0000754808,0.000012863121,0.87274575,0.00078592903,0.02172068,0.000117343545],"about_ca_topic_score_codex":0.0006328327,"about_ca_topic_score_gemma":0.00060360006,"teacher_disagreement_score":0.13911691,"about_ca_system_score_codex":0.00008591947,"about_ca_system_score_gemma":0.0000040495715,"threshold_uncertainty_score":0.3304778},"labels":[],"label_agreement":null},{"id":"W2247435216","doi":"10.1007/978-1-62703-481-4_6","title":"Assessment of Oxidative Metabolism","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Oxidative phosphorylation; Oxidative metabolism; Flow cytometry; Cell biology; Metabolism; Cell; Oxidative damage; Biology; Chemistry; Biochemistry; Oxidative stress; Molecular biology","score_opus":0.015235924342059396,"score_gpt":0.4114499062887357,"score_spread":0.3962139819466763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2247435216","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31049803,0.0009317202,0.6830699,0.000088680135,0.00016793776,0.00029231628,0.000011831991,0.0000063249354,0.0049332823],"genre_scores_gemma":[0.3063097,0.000108047585,0.6929503,0.00026158453,0.000038552847,0.0001103072,0.00008595528,0.000014888125,0.00012067149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99722236,0.001566381,0.00038136827,0.00046344227,0.000052740696,0.0003137081],"domain_scores_gemma":[0.9991269,0.00007626672,0.00016571867,0.0004426414,0.00013212388,0.000056362638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007320723,0.00020045177,0.00037621995,0.00012709557,0.000026677231,0.00000548482,0.0003291079,0.00034454043,0.00013366892],"category_scores_gemma":[0.00033637774,0.00016988588,0.00012611295,0.000181295,0.00035917433,0.0000037490624,0.000217622,0.00018239953,0.000005415036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010996736,0.000060528815,0.014683495,0.000007317397,0.00008170652,0.0000015986421,0.000015453455,0.00002821147,0.9668746,0.009730766,0.000044733333,0.00846057],"study_design_scores_gemma":[0.00047909716,0.00022880775,0.055755537,0.0000064937312,0.000013055415,0.000005107511,0.000056924455,0.00006150319,0.9321856,0.007995632,0.0030197282,0.000192516],"about_ca_topic_score_codex":0.00007238641,"about_ca_topic_score_gemma":0.000007463353,"teacher_disagreement_score":0.04107204,"about_ca_system_score_codex":0.000009967738,"about_ca_system_score_gemma":0.000062957035,"threshold_uncertainty_score":0.69277453},"labels":[],"label_agreement":null},{"id":"W2248095606","doi":"10.1007/978-1-4939-3341-9_13","title":"Simple and Effective Affinity Purification Procedures for Mass Spectrometry-Based Identification of Protein-Protein Interactions in Cell Signaling Pathways","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Mass spectrometry; Intracellular; Chemistry; Protein–protein interaction; Identification (biology); Computational biology; Proteomics; Signal transduction; Cell function; Function (biology); Protein purification; Cell; Biochemistry; Chromatography; Cell biology; Biology","score_opus":0.029613977701967862,"score_gpt":0.38310499887378036,"score_spread":0.35349102117181247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2248095606","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32601133,0.000078314726,0.6728012,0.000038174545,0.0000058921178,0.0009283749,0.000028404615,0.00002484453,0.00008349522],"genre_scores_gemma":[0.4852971,0.0000012174783,0.5127192,0.0000059193603,0.000006780431,0.0019147446,0.00003862661,0.000010472728,0.000005921266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988087,0.00021273698,0.00040653438,0.00036035292,0.00004612668,0.0001655402],"domain_scores_gemma":[0.99908704,0.00020063015,0.00029126846,0.00026850056,0.000113797185,0.00003874689],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009703972,0.00012664497,0.00021722695,0.0001844942,0.000031581192,0.000010391083,0.00014131486,0.0001242349,0.0000055721475],"category_scores_gemma":[0.00093417655,0.00013523844,0.00004549195,0.0002669361,0.00007213389,0.00003644469,0.000030538362,0.00019397028,3.6359557e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006532339,0.00009912248,0.00038642,0.000159734,0.0000045281845,4.7017645e-7,0.0000526489,0.00024629416,0.9926037,0.004817472,4.1539562e-7,0.0015638501],"study_design_scores_gemma":[0.00039111884,0.000052462445,0.000047427566,0.000029136176,0.000006299382,6.1722835e-7,0.00006766948,0.0015819467,0.8189111,0.17876455,0.0000442498,0.0001034322],"about_ca_topic_score_codex":0.000030077124,"about_ca_topic_score_gemma":0.0000075942194,"teacher_disagreement_score":0.17394708,"about_ca_system_score_codex":0.00010736762,"about_ca_system_score_gemma":0.000066784465,"threshold_uncertainty_score":0.5514864},"labels":[],"label_agreement":null},{"id":"W2249591594","doi":"10.1007/978-1-59745-553-4_6","title":"Multiplex Genotyping for Thrombophilia-Associated SNPs by Universal Bead Arrays","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Luminex (Canada)","funders":"","keywords":"Genotyping; Multiplex; Primer extension; Primer (cosmetics); SNP genotyping; Single-nucleotide polymorphism; Multiplex polymerase chain reaction; Genetics; Biology; Molecular Inversion Probe; Bead; Computational biology; Molecular biology; Genotype; Polymerase chain reaction; Nucleotide; Gene; Chemistry; Materials science","score_opus":0.09791033705726426,"score_gpt":0.45049776376480793,"score_spread":0.35258742670754367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2249591594","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000044721382,0.5531767,0.44490105,0.00004135575,0.00031151224,0.0012592123,0.000069738475,0.00006209966,0.00017389086],"genre_scores_gemma":[0.0000027146139,0.61712646,0.38121542,0.00027006067,0.00005142844,0.00013452761,0.0010086948,0.00008659934,0.00010410137],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99568456,0.0018787462,0.0008603286,0.00085279974,0.00012514423,0.00059842446],"domain_scores_gemma":[0.99805194,0.0006532869,0.0004753304,0.00055465975,0.000119932345,0.00014486507],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009463791,0.00058052526,0.0030432,0.00042267007,0.000098857876,0.000008886924,0.00029936107,0.0014410525,0.0000566062],"category_scores_gemma":[0.0009923627,0.00052533153,0.00086716947,0.0005464172,0.00015751555,0.000020112897,0.00011250759,0.0006430314,0.000012049728],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030455636,0.00038761526,0.0000149872585,0.0022388895,0.0013029247,0.000054165655,0.00009621433,0.0000016309908,0.040310394,0.00452333,0.0004309521,0.95060843],"study_design_scores_gemma":[0.0022573753,0.00050062255,0.000006001412,0.0022926098,0.0012853396,0.00008656094,0.000021621792,0.00020762617,0.002762492,0.00239453,0.9874834,0.000701851],"about_ca_topic_score_codex":0.000034103396,"about_ca_topic_score_gemma":0.0000058184332,"teacher_disagreement_score":0.98705244,"about_ca_system_score_codex":0.00029937402,"about_ca_system_score_gemma":0.00031179623,"threshold_uncertainty_score":0.9998553},"labels":[],"label_agreement":null},{"id":"W2253733655","doi":"10.1007/978-1-4939-3375-4_15","title":"The Use of ClusterMine360 for the Analysis of Polyketide and Nonribosomal Peptide Biosynthetic Pathways","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Nonribosomal peptide; Polyketide; Gene cluster; Polyketide synthase; Biology; Gene; Biosynthesis; Computational biology; Database; Genetics; Computer science","score_opus":0.05242241140440067,"score_gpt":0.36244303625097796,"score_spread":0.3100206248465773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2253733655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7154211,0.002437285,0.27507678,0.0061219945,0.00012681202,0.0006792753,0.00011042603,0.000008090997,0.000018269133],"genre_scores_gemma":[0.68702865,0.00055312534,0.31189343,0.00031693865,0.000030026073,0.0000070934566,0.000004536257,0.000013884214,0.00015231875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987534,0.00037393055,0.0003773457,0.00024511444,0.000051758103,0.00019844496],"domain_scores_gemma":[0.99562156,0.0036251685,0.00017016513,0.0004508582,0.000102726175,0.000029524892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013524704,0.00011582781,0.0004381374,0.00016948281,0.000044320328,0.0000043915043,0.00014151537,0.00011265492,0.000011875058],"category_scores_gemma":[0.0035132074,0.0000445362,0.0002049435,0.00038013264,0.00049603404,0.000012263827,0.000092745686,0.00006909198,1.5324264e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020725073,0.000021631395,0.0011863415,0.000017737593,0.00037555952,0.000001838569,0.000027420343,0.0000016871962,0.8690197,0.0007450351,0.000017968337,0.12837783],"study_design_scores_gemma":[0.0004390221,0.00021244684,0.0053764214,0.000046525056,0.00094480376,0.000014305884,0.000025577105,0.00045621634,0.9840993,0.0005451537,0.007756052,0.00008415038],"about_ca_topic_score_codex":0.000067913905,"about_ca_topic_score_gemma":0.000044414104,"teacher_disagreement_score":0.12829368,"about_ca_system_score_codex":0.000011871157,"about_ca_system_score_gemma":0.000026466083,"threshold_uncertainty_score":0.42058912},"labels":[],"label_agreement":null},{"id":"W2255907564","doi":"10.1007/7651_2015_311","title":"Expansion of Human Induced Pluripotent Stem Cells in Stirred Suspension Bioreactors","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Induced pluripotent stem cell; Bioreactor; Human Induced Pluripotent Stem Cells; Regenerative medicine; Suspension culture; Cell biology; Stem cell; Biology; Cell culture; Biotechnology; Biochemical engineering; Engineering; Embryonic stem cell; Biochemistry; Genetics; Botany","score_opus":0.06661156820012476,"score_gpt":0.3999523486537178,"score_spread":0.33334078045359306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2255907564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96431226,0.0005956057,0.033965632,0.000070398004,0.0002620036,0.00047325567,0.000008686579,0.000010604642,0.00030152744],"genre_scores_gemma":[0.93769884,0.00006608839,0.061868764,0.000066719134,0.00003514315,0.000036768364,0.00006523299,0.00004318215,0.00011928751],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995595,0.0022582852,0.0006648532,0.0007198929,0.00021622435,0.0005457599],"domain_scores_gemma":[0.99871856,0.00006023734,0.0001861864,0.00070402515,0.00015960466,0.00017136398],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021952025,0.00027813483,0.00050227257,0.00044705142,0.000023353816,0.000008784138,0.00046987386,0.0005446592,0.000007761082],"category_scores_gemma":[0.00021897725,0.0002624737,0.00012451477,0.00043010092,0.00017083077,0.0000046744176,0.000495584,0.00031329464,0.000005457869],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014142627,0.00013483434,0.004431691,0.000024228315,0.000021562508,0.00004659828,0.00008305178,0.00011115841,0.98958474,0.00008454324,0.000039868693,0.0052963216],"study_design_scores_gemma":[0.0014524577,0.0008533378,0.0007477595,0.000034837165,0.00000737565,0.000008268573,0.00024478062,0.00014255692,0.99496335,0.000510866,0.0007755738,0.00025883468],"about_ca_topic_score_codex":0.00039116328,"about_ca_topic_score_gemma":0.00011622977,"teacher_disagreement_score":0.027903132,"about_ca_system_score_codex":0.000088045555,"about_ca_system_score_gemma":0.00017932776,"threshold_uncertainty_score":0.9999828},"labels":[],"label_agreement":null},{"id":"W2258328398","doi":"10.1007/978-1-59745-385-1_3","title":"Modeling Longitudinal Data, I: Principles of Multivariate Analysis","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Statistical Methods and Bayesian Inference","field":"Mathematics","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Statistics; Multivariate statistics; Econometrics; Component (thermodynamics); Confidence interval; Statistical model; Point estimation; Mathematics; Computer science","score_opus":0.37861015897843187,"score_gpt":0.5676699032039911,"score_spread":0.18905974422555927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2258328398","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[3.2070497e-7,0.44922137,0.5501908,0.0000015094247,0.00006283117,0.00022655612,0.00013499131,0.000013056107,0.00014857564],"genre_scores_gemma":[1.6498363e-7,0.47261193,0.52720296,0.000002994788,0.000016467096,0.000028322303,0.00010471905,0.00002577983,0.0000066936705],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99056304,0.00607644,0.0017661792,0.0010203354,0.00014844743,0.00042558485],"domain_scores_gemma":[0.9925441,0.004828502,0.0006179139,0.0018287338,0.00010105899,0.00007969828],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0031632765,0.00049645815,0.0042081024,0.0007736158,0.00003686132,0.000010338246,0.0012249345,0.00064778613,0.000053277952],"category_scores_gemma":[0.010301423,0.00038212776,0.00061398,0.0013159809,0.00021434303,0.000024170215,0.00080841687,0.0006109259,0.0000020971606],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003870766,0.00008178181,0.000016399066,0.00251017,0.0011558946,0.00005358412,0.00001825117,0.000033623837,0.000025957237,0.23732373,9.2411136e-7,0.75877583],"study_design_scores_gemma":[0.0004812109,0.00016293314,0.00000694759,0.004975347,0.013127996,0.000120885285,0.000011415622,0.225642,0.000067102366,0.6437412,0.1099683,0.001694676],"about_ca_topic_score_codex":0.00014718596,"about_ca_topic_score_gemma":0.00002135193,"teacher_disagreement_score":0.75708115,"about_ca_system_score_codex":0.0000548483,"about_ca_system_score_gemma":0.0002017228,"threshold_uncertainty_score":0.9998631},"labels":[],"label_agreement":null},{"id":"W2258692498","doi":"10.1007/978-1-60327-015-1_26","title":"Use of Site-Specific Protein-DNA Photocrosslinking of Purified Complexes to Analyze the Topology of the RNA Polymerase II Transcription Initiation Complex","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"DNA; Nucleotide; Transcription (linguistics); Molecular biology; Chemistry; Polymerase; DNA sequencing; Electrophoretic mobility shift assay; Biochemistry; Biology; Transcription factor; Gene","score_opus":0.053911687724294034,"score_gpt":0.35028387795716937,"score_spread":0.2963721902328753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2258692498","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71426934,0.00036813534,0.2840439,0.0004322444,0.00007048984,0.0007013654,0.000034684643,0.0000035946725,0.00007621956],"genre_scores_gemma":[0.838348,0.000031010477,0.16106686,0.00041984644,0.000025494082,0.000041532767,0.000033562985,0.000012113534,0.000021624533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968659,0.0017954597,0.0006384904,0.00034122137,0.000111849185,0.00024703407],"domain_scores_gemma":[0.99874777,0.0000855297,0.00036034867,0.00064894126,0.00012369595,0.00003372334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001010945,0.00018729066,0.00040654314,0.00012201349,0.0000886903,0.0000069768694,0.00042548723,0.00025270457,0.00003190615],"category_scores_gemma":[0.00026309377,0.0001316577,0.00021362449,0.0003163121,0.00028936757,0.0000039824686,0.00011000578,0.0001193792,2.7635735e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024492087,0.00009230613,0.00014280551,0.000014344625,0.000030913037,7.4530686e-7,0.0002585799,0.00009659534,0.9830958,0.0052719517,0.000009360518,0.010741677],"study_design_scores_gemma":[0.00032043684,0.0006452822,0.0015192144,0.00003093519,0.000020632344,0.000004346876,0.000049323306,0.000028086492,0.9914506,0.0040597776,0.0017428906,0.0001284734],"about_ca_topic_score_codex":0.00010092423,"about_ca_topic_score_gemma":0.000039582716,"teacher_disagreement_score":0.124078594,"about_ca_system_score_codex":0.000011501643,"about_ca_system_score_gemma":0.000041574374,"threshold_uncertainty_score":0.53688455},"labels":[],"label_agreement":null},{"id":"W2260795714","doi":"10.1007/978-1-61779-276-2_18","title":"Displaying Chemical Information on a Biological Network Using Cytoscape","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"chEMBL; Biological network; Computer science; Context (archaeology); Open source; Systems biology; Data science; Computational biology; Gene regulatory network; R package; Software; Data mining; Bioinformatics; Biology; Drug discovery; Gene","score_opus":0.04181434649189766,"score_gpt":0.3461982105129286,"score_spread":0.30438386402103096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2260795714","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18374184,0.00023040845,0.811908,0.000016157424,0.00026583936,0.00020440003,0.0000060698167,0.000014650887,0.0036126424],"genre_scores_gemma":[0.27363122,0.000052164807,0.72470176,0.0013222573,0.00013132975,0.000025998734,0.00011484427,0.000015968013,0.000004474647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982937,0.00037717263,0.00048221738,0.00029443656,0.000054204673,0.0004982702],"domain_scores_gemma":[0.99929744,0.00003642232,0.00015985176,0.00038309788,0.00003832789,0.0000848511],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093448395,0.00023683814,0.0002710668,0.00008524538,0.000056835892,0.000014550131,0.000303321,0.0005313575,0.000029166386],"category_scores_gemma":[0.00017501687,0.00020456537,0.00012460673,0.00018450485,0.0001473605,0.0000066059674,0.0002502655,0.00025413965,0.000011520589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027896414,0.00006577646,0.0034647535,0.000010831522,0.00006415127,0.000006258906,0.00013702315,0.0006651683,0.9489688,0.014340331,0.00009420054,0.031903725],"study_design_scores_gemma":[0.0032691776,0.0021106282,0.0024037552,0.000118114054,0.000059288694,0.00020386497,0.00027021408,0.021613916,0.8606231,0.076142825,0.031045815,0.0021392829],"about_ca_topic_score_codex":0.000015566855,"about_ca_topic_score_gemma":0.0000014899409,"teacher_disagreement_score":0.08988936,"about_ca_system_score_codex":0.000026469155,"about_ca_system_score_gemma":0.000038622093,"threshold_uncertainty_score":0.83419335},"labels":[],"label_agreement":null},{"id":"W2261971149","doi":"10.1007/978-1-61779-992-1_31","title":"On-Line Resources for Xenopus","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Xenopus; GenBank; UniProt; Pace; Biological data; Genome; Variety (cybernetics); Biology; Computer science; Computational biology; Data science; Evolutionary biology; Bioinformatics; Genetics; Geography; Gene; Artificial intelligence","score_opus":0.03570530442368876,"score_gpt":0.39272781563875087,"score_spread":0.3570225112150621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2261971149","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46753863,0.0051880158,0.52518505,0.00014650614,0.00045298118,0.0002815245,0.000023490711,0.0000040635437,0.0011797231],"genre_scores_gemma":[0.4391215,0.00011767858,0.5590278,0.0010552981,0.00028361272,0.00014222639,0.000028482124,0.000032817206,0.00019056602],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986073,0.00034522917,0.0002268925,0.0003324398,0.00003513553,0.00045303325],"domain_scores_gemma":[0.999364,0.00012268456,0.000065686574,0.00033889996,0.00003844502,0.00007029082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009397449,0.00017996105,0.00022840277,0.000074934345,0.00005283986,0.000005622352,0.00019587271,0.00021045128,0.000006801367],"category_scores_gemma":[0.00050691783,0.00016152825,0.00011452659,0.00007835031,0.000097917495,3.191351e-7,0.00013091441,0.00008077664,0.000003321365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008953662,0.00007060931,0.0025142774,0.000007603933,0.000054274722,4.9589755e-7,0.00006143632,0.00012043499,0.9822213,0.0055166865,0.00012854209,0.009214785],"study_design_scores_gemma":[0.0007978359,0.0009193418,0.0010061743,0.0000053817134,0.000021256083,0.000007949894,0.000045618228,0.000053456115,0.81935203,0.011355534,0.16612743,0.00030797796],"about_ca_topic_score_codex":0.000007915868,"about_ca_topic_score_gemma":0.000004308391,"teacher_disagreement_score":0.16599889,"about_ca_system_score_codex":0.000011187386,"about_ca_system_score_gemma":0.000014885388,"threshold_uncertainty_score":0.6586931},"labels":[],"label_agreement":null},{"id":"W2265094363","doi":"10.1007/978-1-59745-182-6_9","title":"In Vitro Human T Cell Development Directed by Notch–Ligand Interactions","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Hospital; University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Stromal cell; Haematopoiesis; Cell biology; Bone marrow; Biology; Stem cell; Lymphopoiesis; Immunology; Cancer research","score_opus":0.014952605474386382,"score_gpt":0.35388098251827693,"score_spread":0.33892837704389056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2265094363","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90154505,0.000761219,0.09577493,0.00009984593,0.00024317007,0.00020693715,0.0000071847385,0.00001834096,0.0013433388],"genre_scores_gemma":[0.65064,0.00005648848,0.34664986,0.00047405346,0.00003270239,0.0000856251,0.0006642211,0.000021736516,0.0013752951],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980639,0.0006084731,0.00041410633,0.00051898754,0.000047761074,0.00034677866],"domain_scores_gemma":[0.99955,0.000032920718,0.00009323655,0.00023347478,0.000034231467,0.00005615963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004612953,0.00021483033,0.0002534896,0.00017167078,0.00010235698,0.0000042518036,0.00019138554,0.00031309458,0.000022574242],"category_scores_gemma":[0.00007308174,0.00021924093,0.0000600334,0.00022074449,0.00015347214,0.0000045272723,0.00013844357,0.00019076144,0.0000105118625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007251218,0.00012982076,0.0046268017,0.0000050976914,0.000021938149,0.000015676098,0.000104416176,0.000008451227,0.9916093,0.0000147871015,0.0003757702,0.0030154597],"study_design_scores_gemma":[0.0006293619,0.0000617357,0.0033309737,0.000004526801,0.0000031381396,0.000033717428,0.000016301916,0.000012082667,0.9528913,0.00019597712,0.042570964,0.0002499128],"about_ca_topic_score_codex":0.000032075674,"about_ca_topic_score_gemma":0.000048239286,"teacher_disagreement_score":0.250905,"about_ca_system_score_codex":0.000056195222,"about_ca_system_score_gemma":0.00007947697,"threshold_uncertainty_score":0.89403856},"labels":[],"label_agreement":null},{"id":"W2266315862","doi":"10.1007/978-1-59745-188-8_17","title":"Quantitative Protein Profiling by Mass Spectrometry Using Label-Free Proteomics","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":85,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Proteomics; Profiling (computer programming); Mass spectrometry; Quantitative proteomics; Computational biology; Chemistry; Chromatography; Computer science; Biology; Biochemistry","score_opus":0.046995703619074757,"score_gpt":0.41572991430049216,"score_spread":0.36873421068141743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2266315862","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19937861,0.00036398013,0.7985165,0.00009100223,0.000012794148,0.0005273798,0.00004586274,0.000096162046,0.0009676758],"genre_scores_gemma":[0.0024987953,0.000041073727,0.9966185,0.00006778843,0.000021855958,0.00054719485,0.000038579143,0.000049300757,0.000116894254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983528,0.00023265969,0.00039835158,0.0005320407,0.00007715474,0.00040696922],"domain_scores_gemma":[0.9989585,0.000092284456,0.00020144867,0.00063028064,0.000059880334,0.00005759882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048520177,0.00023086382,0.00034028725,0.00011795785,0.00011376763,0.000008412754,0.0004712888,0.000305738,0.000039295046],"category_scores_gemma":[0.00050310255,0.00023985944,0.00006896838,0.00038948434,0.00023323235,0.0000395727,0.0001774574,0.00050888234,0.0000021897515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030858373,0.000059604477,0.0004280315,0.000028999975,0.000017339991,0.000014277792,0.000020251517,0.000020812293,0.9755183,0.023546876,0.0000047975705,0.00030987104],"study_design_scores_gemma":[0.00035359745,0.000059299324,7.9559607e-7,0.0000217385,0.0000061261626,0.00002198117,0.000026741944,0.0023819155,0.88484883,0.11181853,0.0002191199,0.00024134948],"about_ca_topic_score_codex":0.000037138147,"about_ca_topic_score_gemma":6.919032e-7,"teacher_disagreement_score":0.19810198,"about_ca_system_score_codex":0.00014985072,"about_ca_system_score_gemma":0.00006564922,"threshold_uncertainty_score":0.97811836},"labels":[],"label_agreement":null},{"id":"W2266505172","doi":"10.1007/978-1-62703-128-8_8","title":"In Vitro Generation of Human T Regulatory Cells: Generation, Culture, and Analysis of FOXP3-Transduced T Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"FOXP3; Ex vivo; Immune system; Immunology; In vitro; Biology; Cell biology; Phenotype; Regulatory T cell; Transcription factor; IL-2 receptor; Cancer research; T cell; Gene; Genetics","score_opus":0.03029027202667068,"score_gpt":0.3490666920658019,"score_spread":0.3187764200391312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2266505172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79587775,0.00425642,0.19798458,0.000018483635,0.0014627699,0.00016539411,0.000007814226,0.000007793248,0.00021901759],"genre_scores_gemma":[0.9417885,0.0001276949,0.056902714,0.00018456733,0.000030774285,0.000019874187,0.00037211354,0.00001173206,0.00056205323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99732864,0.0016650682,0.00055088586,0.00023046158,0.00001970977,0.00020520644],"domain_scores_gemma":[0.99942315,0.0000595746,0.00020584567,0.00022953292,0.00006840116,0.000013506299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010472251,0.00013501449,0.00045238656,0.0005758233,0.0000357361,0.0000025198533,0.00008050158,0.0003490671,0.00020100178],"category_scores_gemma":[0.0000491848,0.00012670681,0.000117436095,0.00040835654,0.00014782281,0.000069686546,0.00002975879,0.00018723079,0.0000027222293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047904927,0.00012338458,0.0008209116,0.000009971627,0.00025542505,2.7905713e-7,0.0006104776,0.000063938605,0.9956475,0.0010796209,0.00011306756,0.0012275563],"study_design_scores_gemma":[0.0005048204,0.00009585128,0.0009162454,0.000003150749,0.00016979844,0.0000022955956,0.00007291877,0.00024629562,0.9957689,0.000045844154,0.0020632534,0.000110649715],"about_ca_topic_score_codex":0.00012488155,"about_ca_topic_score_gemma":0.000019431369,"teacher_disagreement_score":0.14591074,"about_ca_system_score_codex":0.00003212219,"about_ca_system_score_gemma":0.000012523743,"threshold_uncertainty_score":0.5166954},"labels":[],"label_agreement":null},{"id":"W2266612387","doi":"10.1007/978-1-60761-925-3_19","title":"Physical and Chemical Immobilization Methods of Photosynthetic Materials","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"","keywords":"Glutaraldehyde; Covalent bond; Photosynthesis; Polymer; Chemistry; Matrix (chemical analysis); Chemical engineering; Materials science; Polymer chemistry; Nanotechnology; Polymer science; Organic chemistry; Chromatography; Biochemistry; Engineering","score_opus":0.009746629826509107,"score_gpt":0.3743754318481137,"score_spread":0.36462880202160464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2266612387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57590836,0.00007282945,0.42358378,0.000018090403,0.00014072328,0.00012728693,0.000008314379,0.000005434319,0.00013519776],"genre_scores_gemma":[0.5414961,0.000032995227,0.45828828,0.000063085485,0.000034828885,0.000038000908,0.000021386044,0.00001739796,0.000007906581],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998407,0.00055386685,0.00029163793,0.00045243485,0.000048159916,0.0002469049],"domain_scores_gemma":[0.9993036,0.00008219926,0.000118724216,0.00037518694,0.000056998048,0.00006329487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011655216,0.00018154547,0.00035266264,0.0000735604,0.000018629386,0.000007676951,0.00021303215,0.00031213832,0.000027477332],"category_scores_gemma":[0.0008444117,0.0001635271,0.00006682785,0.000115282855,0.00024864177,0.0000022734523,0.00020631369,0.0001419107,5.959497e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046456324,0.00007990276,0.000029194562,0.000030781823,0.000017562688,0.0000011147358,0.000042197422,9.2060765e-7,0.9822975,0.0043614157,5.1593634e-7,0.013092449],"study_design_scores_gemma":[0.00029782575,0.0001637798,0.000014395806,0.000008320591,0.000020193595,0.00003421551,0.00001875975,0.00012383942,0.9807194,0.017649734,0.00078087347,0.00016868932],"about_ca_topic_score_codex":0.000018843106,"about_ca_topic_score_gemma":0.0000037179018,"teacher_disagreement_score":0.03470452,"about_ca_system_score_codex":0.000003965797,"about_ca_system_score_gemma":0.00004240164,"threshold_uncertainty_score":0.6668441},"labels":[],"label_agreement":null},{"id":"W2268652757","doi":"10.1007/978-1-60327-159-2_21","title":"Detecting Lateral Genetic Transfer","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Medical Research Council","keywords":"Transfer (computing); Computer science; Biology; Operating system","score_opus":0.04376843332781872,"score_gpt":0.3962712039559707,"score_spread":0.352502770628152,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2268652757","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000056440822,0.59569913,0.40330815,0.0000034646484,0.0002493655,0.00045720232,0.0000114865925,0.000013946633,0.00020080454],"genre_scores_gemma":[0.000004251422,0.66530055,0.3339661,0.00008105898,0.00014396697,0.00023848556,0.000071258815,0.000094239374,0.000100103665],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9937656,0.0035807218,0.00084550836,0.0010715442,0.00008877439,0.0006478293],"domain_scores_gemma":[0.99877053,0.00011449196,0.0001478589,0.0008249874,0.00003697882,0.00010512627],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007102972,0.00066235475,0.0015266975,0.00027478236,0.000073960844,0.000016994725,0.0006501593,0.0015125236,0.000040864375],"category_scores_gemma":[0.00031424125,0.0005837179,0.00078534207,0.0002731304,0.0001393311,0.0000014204137,0.00019546229,0.00044031476,0.000020993071],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009234502,0.000022137692,0.0000045985435,0.0005026291,0.000117572476,0.00006871004,0.000010712982,0.0000021047176,0.15848681,0.00006525896,0.0000065491704,0.84070367],"study_design_scores_gemma":[0.00021924487,0.00025188678,0.000001110482,0.0005614556,0.00011221038,0.00048952264,0.0000022698212,0.000002571086,0.072446235,0.0004908006,0.92473805,0.0006846269],"about_ca_topic_score_codex":0.000017601616,"about_ca_topic_score_gemma":0.000006690386,"teacher_disagreement_score":0.9247315,"about_ca_system_score_codex":0.000036928952,"about_ca_system_score_gemma":0.0001884363,"threshold_uncertainty_score":0.9997837},"labels":[],"label_agreement":null},{"id":"W2268836774","doi":"10.1007/978-1-59745-385-1_10","title":"Bias in Clinical Studies of Genetic Diseases","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Memorial University of Newfoundland","funders":"","keywords":"Confounding; Selection bias; Information bias; Epidemiology; Etiology; Disease; Medicine; Selection (genetic algorithm); Clinical psychology; Psychology; Psychiatry; Pathology; Computer science","score_opus":0.23643411737752737,"score_gpt":0.5634876396763193,"score_spread":0.3270535222987919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2268836774","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011273155,0.9668987,0.03082153,0.00001756825,0.0004544345,0.0005311188,0.00005154926,0.0000060321568,0.00009179667],"genre_scores_gemma":[0.000016545195,0.75172484,0.24767683,0.00009023797,0.00010805519,0.00014551818,0.0001534613,0.000040735013,0.000043788903],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9865702,0.009437121,0.002443471,0.00096138415,0.00007226844,0.00051555026],"domain_scores_gemma":[0.99700963,0.0010818015,0.0009125437,0.00080859725,0.00010279987,0.000084618914],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0020631882,0.0004879742,0.0032261957,0.00037177798,0.000027249585,0.0000024998922,0.00053157983,0.0013043599,0.0000067741666],"category_scores_gemma":[0.008162232,0.0004125205,0.0009158076,0.0004307943,0.00060262723,8.884726e-7,0.00046361968,0.00042963377,0.000004883303],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014946192,0.00020822392,0.030161047,0.001076512,0.00055808673,0.000047893023,0.000023692388,0.000037430174,0.00029458737,0.00009191181,0.00027846036,0.9672072],"study_design_scores_gemma":[0.000783741,0.00072241673,0.00471212,0.0010889979,0.0003669165,0.000089823996,0.000056271674,0.000012305494,0.00008255683,0.0017681555,0.9895169,0.0007997981],"about_ca_topic_score_codex":0.000027334418,"about_ca_topic_score_gemma":0.000033450746,"teacher_disagreement_score":0.98923844,"about_ca_system_score_codex":0.00005224402,"about_ca_system_score_gemma":0.00047306722,"threshold_uncertainty_score":0.99999213},"labels":[],"label_agreement":null},{"id":"W2269615017","doi":"10.1007/978-1-59745-242-7_2","title":"A Voluntary Oral-feeding Rat Model for Pathological Alcoholic Liver Injury","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Alcohol Consumption and Health Effects","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Alcoholic liver disease; Pathological; Fatty liver; Fish oil; Liver injury; Inflammation; Alcoholic hepatitis; Fibrosis; Pathology; Medicine; Disease; Necrosis; Fish <Actinopterygii>; Biology; Cirrhosis; Immunology; Internal medicine","score_opus":0.21913413113289965,"score_gpt":0.5051397035407799,"score_spread":0.2860055724078802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2269615017","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3051337,0.00075596187,0.6925666,0.0004960979,0.00017143736,0.000666164,0.0000056967797,0.000055836164,0.00014851161],"genre_scores_gemma":[0.12186022,0.0003561543,0.8684606,0.008761497,0.000064882646,0.00022422502,0.000033757733,0.000026813623,0.00021183991],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9979145,0.0007215792,0.0003655142,0.00045380488,0.000075699994,0.00046889947],"domain_scores_gemma":[0.999105,0.00030373066,0.00007730062,0.0002747473,0.0000807521,0.0001585144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001500615,0.00019393815,0.0005521105,0.000248015,0.00009605756,0.0000029462362,0.000109601904,0.00039056723,0.000051212046],"category_scores_gemma":[0.00092069164,0.00016280873,0.00016023564,0.0001913412,0.00022607314,0.000023931269,0.00008472062,0.00037710488,0.000016087826],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078969786,0.0002049451,0.020587921,0.0001740034,0.000036883623,0.00053261017,0.00048989215,0.000055751298,0.9414831,0.0036603024,0.00076785084,0.031217072],"study_design_scores_gemma":[0.019283198,0.006827149,0.051947158,0.00036593952,0.000512534,0.004606373,0.0001117345,0.6981105,0.15816431,0.02686506,0.031008592,0.0021974258],"about_ca_topic_score_codex":0.00001998477,"about_ca_topic_score_gemma":0.0000033661254,"teacher_disagreement_score":0.78331876,"about_ca_system_score_codex":0.0000898229,"about_ca_system_score_gemma":0.00012570483,"threshold_uncertainty_score":0.66391474},"labels":[],"label_agreement":null},{"id":"W22697574","doi":"10.1007/978-1-61779-367-7_10","title":"Isolation and Functional Studies of Human Fetal Gastric Epithelium in Primary Culture","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Epithelium; Secretion; Cell biology; Gastric chief cell; Cell culture; Extracellular matrix; Biology; Foveolar cell; Gastric mucosa; Stomach; Pepsin; Homeostasis; Gastric glands; Multicellular organism; Cell; Endocrinology; Biochemistry; Enzyme","score_opus":0.045191477073651766,"score_gpt":0.3815730818183385,"score_spread":0.3363816047446867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W22697574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7234184,0.01062265,0.2623988,0.000027688442,0.00021983411,0.00027447124,0.0000066351577,0.0000065248105,0.0030249814],"genre_scores_gemma":[0.72234684,0.00061075593,0.27656728,0.00015133836,0.000045047767,0.00003164233,0.00007473265,0.000016665712,0.0001557206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843246,0.00071518956,0.00033132418,0.00030048736,0.00003870487,0.00018181794],"domain_scores_gemma":[0.9996202,0.000020814263,0.000118511816,0.00014310215,0.000066087785,0.000031303764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008188522,0.00012704013,0.00026748065,0.00014178138,0.00002833691,0.0000014197997,0.00006503506,0.00027173432,0.0000045927413],"category_scores_gemma":[0.00012343419,0.00010434261,0.000046335626,0.0001496674,0.00018638447,0.000002471776,0.00009333238,0.00013154121,5.088172e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005851348,0.000056597444,0.054913048,0.000053506177,0.00004773047,0.000004358487,0.00025409783,0.0000055658343,0.94153327,0.00127465,0.000013207575,0.0017854861],"study_design_scores_gemma":[0.003042793,0.0028627045,0.40188444,0.00016034594,0.000060567523,0.000113774106,0.0010366989,0.00003991386,0.57144535,0.01814909,0.00064296706,0.0005613789],"about_ca_topic_score_codex":0.00003381564,"about_ca_topic_score_gemma":0.000017092072,"teacher_disagreement_score":0.37008792,"about_ca_system_score_codex":0.000020575899,"about_ca_system_score_gemma":0.00003717173,"threshold_uncertainty_score":0.42549682},"labels":[],"label_agreement":null},{"id":"W2272503669","doi":"10.1007/978-1-4939-0354-2_1","title":"Data Management in the Modern Structural Biology and Biomedical Research Environment","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; U.S. Public Health Service","keywords":"Raw data; Computer science; Data science; Experimental data; Simple (philosophy); Experimental science; Epistemology; Mathematics; Statistics","score_opus":0.07650489628086267,"score_gpt":0.4649103373225015,"score_spread":0.3884054410416388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2272503669","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13341907,0.001989594,0.85912675,0.0022350587,0.00020876585,0.0007807058,0.000063385814,0.000007929684,0.0021687592],"genre_scores_gemma":[0.3270552,0.0023416972,0.66804045,0.001135698,0.00021145903,0.000105969324,0.0009789402,0.00002942391,0.00010116849],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99474716,0.0030700846,0.0004588002,0.00073238736,0.00026108488,0.0007305039],"domain_scores_gemma":[0.9983156,0.00024694018,0.000054115073,0.0012323058,0.000027567768,0.00012350622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008752478,0.00019502956,0.00025229418,0.00028442495,0.00008115624,0.000029021816,0.0014016558,0.00039240092,0.000015892972],"category_scores_gemma":[0.000856105,0.00013421473,0.000038625174,0.00022987352,0.0012692026,0.0000036535687,0.0019173153,0.00047117315,0.0000071258573],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007974161,0.00011127315,0.0025298158,0.00006637142,0.00006726887,0.000017890248,0.00023090439,0.000010810877,0.497699,0.005304826,0.00035879549,0.4935233],"study_design_scores_gemma":[0.004895625,0.0033968652,0.01360505,0.000054521206,0.000049854818,0.00012177116,0.0012653706,0.047084853,0.03473003,0.26486441,0.62876916,0.0011624828],"about_ca_topic_score_codex":0.000045461104,"about_ca_topic_score_gemma":0.000030534684,"teacher_disagreement_score":0.6284104,"about_ca_system_score_codex":0.000022819993,"about_ca_system_score_gemma":0.00003583655,"threshold_uncertainty_score":0.5473118},"labels":[],"label_agreement":null},{"id":"W2273636061","doi":"10.1007/978-1-59745-385-1_8","title":"Biomarkers and Surrogates in Clinical Studies","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lipoproteins and Cardiovascular Health","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"History","score_opus":0.1747216621043565,"score_gpt":0.567863579266352,"score_spread":0.39314191716199554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2273636061","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010720012,0.99236715,0.005675147,0.00006708351,0.0003549939,0.0012032925,0.0000046067103,0.000019639145,0.00020087088],"genre_scores_gemma":[7.016873e-7,0.7529822,0.2465979,0.00012934174,0.000086441076,0.0001296451,0.000024587274,0.000034464487,0.00001472809],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99033403,0.0070487773,0.0013127989,0.00078406045,0.00010629691,0.00041403357],"domain_scores_gemma":[0.9980328,0.00092549063,0.00021762218,0.00065161806,0.0000500409,0.00012240796],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.006183981,0.00039102577,0.0043823794,0.00049641787,0.000025428166,0.0000035995486,0.00012860497,0.00087918836,0.000004555701],"category_scores_gemma":[0.002809529,0.0002801867,0.00085619575,0.00053725106,0.00048329236,0.000009490008,0.00020325414,0.0008348319,0.000004129656],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014089682,0.000052690015,0.000903626,0.0048908256,0.0009106179,0.0004939903,0.000022508431,2.6432435e-8,0.0000068205145,0.00010246938,0.000016616588,0.9925857],"study_design_scores_gemma":[0.0011989232,0.000343741,0.00034573692,0.005640574,0.0005271235,0.0010630032,0.00004330058,0.0000025655927,0.000014005452,0.00046223187,0.9900221,0.00033668216],"about_ca_topic_score_codex":0.00009327563,"about_ca_topic_score_gemma":0.000023272072,"teacher_disagreement_score":0.992249,"about_ca_system_score_codex":0.00011927158,"about_ca_system_score_gemma":0.00033436675,"threshold_uncertainty_score":0.999965},"labels":[],"label_agreement":null},{"id":"W2273933578","doi":"10.1007/978-1-61779-436-0_4","title":"Isolation of Human Male Germ-Line Stem Cells Using Enzymatic Digestion and Magnetic-Activated Cell Sorting","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health","keywords":"Biology; Stem cell; Cell sorting; Population; Cell biology; Somatic cell; Germ cell; Cell culture; Molecular biology; Cell; Biochemistry; Genetics; Gene","score_opus":0.06382405946500265,"score_gpt":0.3642828648705068,"score_spread":0.3004588054055042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2273933578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57561296,0.00021977191,0.42358923,0.0000039405686,0.00006108549,0.00015570213,5.03211e-7,0.0000116525,0.0003451639],"genre_scores_gemma":[0.56997484,0.0000062601252,0.42993525,0.000023975155,0.00001183735,0.0000037602817,0.0000055400587,0.000011162026,0.000027364775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873596,0.00045974104,0.0003681759,0.00022553018,0.000050594317,0.0001599855],"domain_scores_gemma":[0.9994542,0.000082067934,0.00018621619,0.00017456437,0.00006059095,0.000042332802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005938984,0.00011778546,0.00028599083,0.00017762078,0.000029961893,0.0000028960424,0.000033556204,0.0001630158,0.00008042422],"category_scores_gemma":[0.00009913205,0.00010831622,0.000041664585,0.00017547338,0.00008016098,0.000023999475,0.000034335793,0.00013147264,9.65889e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042519438,0.000079854035,0.023025218,0.00009087788,0.000010657579,0.000016162241,0.00021891508,0.00001660725,0.9708307,0.00022638618,2.1502215e-7,0.005441901],"study_design_scores_gemma":[0.00065305294,0.000633101,0.00668866,0.00006282759,0.00009715,0.00005146745,0.000091378344,0.0060276375,0.98465425,0.00094014016,0.000003551821,0.000096809104],"about_ca_topic_score_codex":0.00011858765,"about_ca_topic_score_gemma":0.0000016401326,"teacher_disagreement_score":0.016336558,"about_ca_system_score_codex":0.000028346154,"about_ca_system_score_gemma":0.000019362658,"threshold_uncertainty_score":0.44170073},"labels":[],"label_agreement":null},{"id":"W2275475733","doi":"10.1007/978-1-60327-058-8_36","title":"Bacterial Structural Genomics Initiative: Overview of Methods and Technologies Applied to the Process of Structure Determination","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Structural genomics; Genomics; Process (computing); Computational biology; Cloning (programming); Focus (optics); Computer science; Data science; Biology; Genome; Protein structure; Genetics; Gene","score_opus":0.04091107243043636,"score_gpt":0.4109208684658294,"score_spread":0.3700097960353931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2275475733","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6341961,0.0003931027,0.36485022,0.000044637345,0.00021194312,0.00022231427,0.000022006232,0.000015337107,0.000044335324],"genre_scores_gemma":[0.4145076,0.000032425687,0.58537275,0.000047045705,0.000014796577,0.000013665142,0.0000050275294,0.0000061192795,5.671321e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984507,0.00070972886,0.0003500317,0.00027398078,0.000056263707,0.00015928676],"domain_scores_gemma":[0.99923706,0.00019894418,0.00022192764,0.00025102738,0.00007554834,0.000015473754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007561168,0.00013728968,0.00035722536,0.00013457843,0.000052274092,0.000005412375,0.00025944904,0.00019935373,0.000029729274],"category_scores_gemma":[0.0005089582,0.00009190211,0.000030292598,0.00028014154,0.0003419697,0.000033604596,0.00014586108,0.00012460882,1.7985667e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053215783,0.00000269172,0.00019190526,0.00004434946,0.000005784109,6.310927e-7,0.0006771165,0.000054875807,0.94689775,0.0019292136,0.0000010805669,0.0501414],"study_design_scores_gemma":[0.00019323087,0.000107183005,0.0021947646,0.0000077112545,0.000013640701,0.000024786745,0.00019198087,0.000074700074,0.9710409,0.025890613,0.00016582743,0.00009462795],"about_ca_topic_score_codex":0.0000109247485,"about_ca_topic_score_gemma":0.000010101363,"teacher_disagreement_score":0.22052254,"about_ca_system_score_codex":0.000019249703,"about_ca_system_score_gemma":0.0000406194,"threshold_uncertainty_score":0.37476593},"labels":[],"label_agreement":null},{"id":"W2276706948","doi":"10.1007/978-1-59745-104-8_8","title":"Utility of the Ovariectomized Rat as a Model for Human Osteoporosis in Drug Discovery","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":86,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women's Health Research Institute","funders":"","keywords":"Ovariectomized rat; Osteoporosis; Osteopenia; Estrogen; Endocrinology; Internal medicine; Medicine; Rat model; Bone mineral","score_opus":0.019603633846013067,"score_gpt":0.3621102374071981,"score_spread":0.34250660356118506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2276706948","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.766659,0.0008292474,0.231533,0.000054445147,0.00011602913,0.00050875806,0.000010809707,0.000004567112,0.00028413153],"genre_scores_gemma":[0.8837803,0.0000771285,0.11541816,0.00017346312,0.000016760123,0.000095931486,0.000043872533,0.000022138891,0.00037224876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976635,0.0011275337,0.0004019638,0.00044013627,0.000060263745,0.0003066077],"domain_scores_gemma":[0.99917376,0.000091327354,0.00013388133,0.0005224629,0.00004261029,0.00003595142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009684406,0.00019259515,0.00037534192,0.00008037012,0.000070202535,0.000004295882,0.0003361618,0.00035862453,0.0000029657276],"category_scores_gemma":[0.00047610913,0.0001421942,0.0002711488,0.00019592007,0.0003316913,0.0000033405593,0.0002098951,0.0002138371,3.4558138e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031263084,0.00010809227,0.0047322633,0.000017316364,0.00003637186,0.000004004074,0.00014986795,0.00032381894,0.9927789,0.0010850993,0.000040085153,0.0004115254],"study_design_scores_gemma":[0.0020979214,0.00014130445,0.0005938317,0.0000138807345,0.00002033792,0.000016184282,0.000025872121,0.0034558072,0.9861564,0.007128939,0.00018184418,0.00016768902],"about_ca_topic_score_codex":0.0001614658,"about_ca_topic_score_gemma":0.00007139426,"teacher_disagreement_score":0.117121294,"about_ca_system_score_codex":0.000013018165,"about_ca_system_score_gemma":0.00013896223,"threshold_uncertainty_score":0.57985115},"labels":[],"label_agreement":null},{"id":"W2276742278","doi":"10.1007/978-1-60327-461-6_23","title":"Electron Spectroscopic Imaging of the Nuclear Landscape","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Chromatin; Nucleolus; Electron microscope; Nucleus; Contrast (vision); Chemistry; Nucleic acid; Resolution (logic); Biophysics; Nanotechnology; Materials science; Physics; Biology; Computer science; Optics; Cell biology; DNA; Biochemistry; Artificial intelligence","score_opus":0.006820027916425556,"score_gpt":0.30946434106664317,"score_spread":0.3026443131502176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2276742278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9204534,0.0009728021,0.07369881,0.00020040598,0.00032456935,0.00013390578,0.0000018613631,0.00000957502,0.004204633],"genre_scores_gemma":[0.8767704,0.00009569767,0.12245898,0.00045112972,0.00007823141,0.000004188253,0.000009722432,0.000023114562,0.000108564294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989432,0.00038138268,0.00017251403,0.00024931697,0.00004550537,0.00020809178],"domain_scores_gemma":[0.9995079,0.000011353162,0.00007463739,0.00035917084,0.000026117656,0.00002080803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000185672,0.00010880526,0.00014944901,0.00004894591,0.000051360345,0.0000024875062,0.00021238043,0.00011947357,0.000031205633],"category_scores_gemma":[0.000113850976,0.000081540726,0.00009757976,0.00014218023,0.00015202655,0.0000013539421,0.00011461773,0.0001417882,0.000002257669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003244765,0.000013452947,0.028980443,0.0000036035976,0.000013867774,0.0000029286996,0.000025778138,0.000008536377,0.96840674,0.0013079994,0.00012342377,0.0010807918],"study_design_scores_gemma":[0.00044640742,0.00018936074,0.022020617,0.000004412102,0.00001171405,0.000104178616,0.000021390122,0.00008494397,0.9582765,0.0016878544,0.017015837,0.0001367631],"about_ca_topic_score_codex":0.000015248396,"about_ca_topic_score_gemma":0.0000033163494,"teacher_disagreement_score":0.048760172,"about_ca_system_score_codex":0.000009105016,"about_ca_system_score_gemma":0.000031704425,"threshold_uncertainty_score":0.33251342},"labels":[],"label_agreement":null},{"id":"W2277970610","doi":"10.1007/978-1-4939-2596-4_1","title":"A High-Throughput Confocal Fluorescence Microscopy Platform to Study DNA Replication Stress in Yeast Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Green fluorescent protein; Fluorescence microscope; Confocal; Yeast; Fluorescence; Confocal microscopy; Context (archaeology); Cell biology; Live cell imaging; Microscopy; Fluorescence-lifetime imaging microscopy; Throughput; Chemistry; Biophysics; Biology; Biochemistry; Cell; Gene; Optics; Computer science; Physics","score_opus":0.043049970239164514,"score_gpt":0.4272097592476439,"score_spread":0.3841597890084794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2277970610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82871366,0.00025936685,0.16971008,0.00010753972,0.00022887667,0.0007430379,0.000035449048,0.0000095991345,0.00019240858],"genre_scores_gemma":[0.56807333,0.000030166317,0.43115503,0.0002347771,0.00007916302,0.00017546548,0.000090319285,0.00003197875,0.00012975297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99714226,0.0008496546,0.000420447,0.0009230456,0.00015326325,0.00051132875],"domain_scores_gemma":[0.99864423,0.00003184191,0.0000676978,0.0009238808,0.00013320248,0.00019912886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017285843,0.00023035673,0.00031411857,0.00016262247,0.00003494531,0.0000288213,0.0005357749,0.00027987012,0.000010962166],"category_scores_gemma":[0.0005222227,0.00022207753,0.000053017557,0.00039197702,0.00012122337,0.0000033003607,0.0005073377,0.00024248735,0.00002012834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025898535,0.00032978057,0.006434119,0.000008218217,0.000021546393,0.000026672222,0.00021310768,0.00027858006,0.9827159,0.000098078366,0.00009027996,0.009524707],"study_design_scores_gemma":[0.0012019047,0.0012329369,0.0012356678,0.0000120039185,0.0000055671453,0.000006617514,0.00030723278,0.00011648082,0.99363875,0.00061149156,0.0013865796,0.00024478516],"about_ca_topic_score_codex":0.00045602504,"about_ca_topic_score_gemma":0.00022203007,"teacher_disagreement_score":0.26144493,"about_ca_system_score_codex":0.0000591229,"about_ca_system_score_gemma":0.00013840108,"threshold_uncertainty_score":0.9056059},"labels":[],"label_agreement":null},{"id":"W2278606397","doi":"10.1007/978-1-60327-009-0_10","title":"A Novel Technical Approach for the Measurement of Individual ACAT-1 and ACAT-2 Enzymatic Activity in the Testis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Sterol O-acyltransferase; Internal medicine; Enzyme; Enzyme assay; Endocrinology; Biology; Cholesterol; Chemistry; Biochemistry; Medicine; Lipoprotein","score_opus":0.09278769709775421,"score_gpt":0.4083292991377183,"score_spread":0.3155416020399641,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2278606397","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07637403,0.0014037883,0.9186977,0.0021107749,0.000042892792,0.0011484133,0.0000064991673,0.0000090137155,0.00020686186],"genre_scores_gemma":[0.45347357,0.000024829938,0.54525095,0.0010745511,0.00003623059,0.0001284632,0.000003389325,0.0000060557445,0.0000019496251],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9985036,0.0005600849,0.00028102598,0.00025841128,0.00017421006,0.00022266473],"domain_scores_gemma":[0.99891794,0.0005590306,0.00009084255,0.00035985644,0.000041486088,0.00003083327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0059404573,0.00013608452,0.00040078454,0.000115906696,0.00002779609,0.000007346242,0.00025058797,0.00017923543,9.9799e-7],"category_scores_gemma":[0.0015330397,0.00007300579,0.00007699687,0.00027002196,0.00017687137,0.000013684092,0.000060894465,0.000364116,7.18043e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010589009,0.00035102613,0.00053341134,0.000038006878,0.00002573662,0.0000010131469,0.00035695324,0.0000070602364,0.8267835,0.0013897284,0.000009762702,0.17039791],"study_design_scores_gemma":[0.007879163,0.001551062,0.77956164,0.0001335476,0.00060657953,0.0003007553,0.00047772413,0.0024809784,0.19312797,0.009481211,0.0040278016,0.0003715851],"about_ca_topic_score_codex":0.000023685918,"about_ca_topic_score_gemma":0.000006832968,"teacher_disagreement_score":0.77902824,"about_ca_system_score_codex":0.000021826576,"about_ca_system_score_gemma":0.00004972438,"threshold_uncertainty_score":0.29770896},"labels":[],"label_agreement":null},{"id":"W2280181579","doi":"10.1007/978-1-4939-2599-5_8","title":"Pulsed-Field Gel Electrophoresis of Staphylococcus aureus","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Provincial Laboratory of Public Health; University of Alberta; Public Health Agency of Canada; University of Manitoba","funders":"","keywords":"Pulsed-field gel electrophoresis; Restriction enzyme; Gel electrophoresis; DNA profiling; Staphylococcus aureus; Agarose gel electrophoresis; Typing; DNA; Agarose; Biology; Microbiology; Genetics; Molecular biology; Bacteria; Gene; Genotype","score_opus":0.028674239679288567,"score_gpt":0.4020926877397635,"score_spread":0.3734184480604749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2280181579","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27293494,0.0027984227,0.7171706,0.0006613422,0.00022787096,0.00048504755,0.000008787993,0.000040297564,0.005672686],"genre_scores_gemma":[0.2752965,0.00010379934,0.723139,0.0011502149,0.00005731298,0.000035351797,0.000012498173,0.000039598683,0.00016574084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752903,0.0007861648,0.0005639093,0.00044846057,0.00015884305,0.0005136013],"domain_scores_gemma":[0.9984636,0.00032017642,0.00017187183,0.0006287275,0.00023764015,0.00017800884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013498694,0.00023572521,0.000731156,0.0003675197,0.00001773685,0.000005360781,0.0002637692,0.00037608176,0.000057431225],"category_scores_gemma":[0.0028013298,0.00021139163,0.00018607192,0.0006313244,0.00022958574,0.000019234518,0.00011433266,0.00040620044,0.000009040332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006063591,0.00012603286,0.0133773675,0.000044204247,0.00007018735,0.00012620454,0.00008430017,0.000013356689,0.970757,0.0019624624,0.0006445207,0.0121879885],"study_design_scores_gemma":[0.0014433002,0.0010743581,0.0013156551,0.000050742736,0.000062278195,0.000014337033,0.00008488683,0.000078184414,0.9787388,0.0082717035,0.008651141,0.00021461264],"about_ca_topic_score_codex":0.00017859096,"about_ca_topic_score_gemma":0.000022774866,"teacher_disagreement_score":0.012061712,"about_ca_system_score_codex":0.00012175351,"about_ca_system_score_gemma":0.00030036914,"threshold_uncertainty_score":0.86203},"labels":[],"label_agreement":null},{"id":"W2281068443","doi":"10.1007/978-1-59745-468-1_15","title":"Environmental Surveillance for MRSA","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Sampling (signal processing); Contamination; Staphylococcus aureus; Transmission (telecommunications); Methicillin-resistant Staphylococcus aureus; Microbiology; Environmental health; Medicine; Biology; Computer science; Ecology; Bacteria; Telecommunications","score_opus":0.0192341789100535,"score_gpt":0.40218410951422884,"score_spread":0.3829499306041753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2281068443","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16618809,0.0006055771,0.8314248,0.00016514338,0.00015737004,0.0003980444,0.000013645916,0.000018207127,0.0010291139],"genre_scores_gemma":[0.19802718,0.000030227488,0.8009503,0.00075100525,0.00004714927,0.000018234005,0.00002279741,0.00002055916,0.00013259157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877685,0.00019312224,0.0002873373,0.00031222872,0.000048131074,0.00038232803],"domain_scores_gemma":[0.9991931,0.0004055352,0.00006308848,0.000259998,0.0000143259995,0.00006400655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018156824,0.00012653315,0.0003135085,0.00011514315,0.000023883811,0.0000025390798,0.000095357056,0.00018519026,0.00003846851],"category_scores_gemma":[0.00048223155,0.000118148535,0.00011212152,0.00011892725,0.00018114218,0.000007681452,0.0000409244,0.00014674528,0.00000613095],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024461493,0.000053310236,0.036659297,0.000016329122,0.000019334238,0.0000448733,0.000021119491,0.0000014500309,0.9169935,0.00094218674,0.00004200307,0.044962008],"study_design_scores_gemma":[0.0016969865,0.00034251445,0.048488438,0.000018941533,0.000017928518,0.000023761413,0.000057395682,0.0000501503,0.881265,0.003268313,0.0645424,0.00022819056],"about_ca_topic_score_codex":0.000007929118,"about_ca_topic_score_gemma":0.000012700156,"teacher_disagreement_score":0.06450039,"about_ca_system_score_codex":0.000095613985,"about_ca_system_score_gemma":0.000024312601,"threshold_uncertainty_score":0.48179573},"labels":[],"label_agreement":null},{"id":"W2281172512","doi":"10.1007/978-1-61779-191-8_29","title":"In Vivo Optical Imaging of Ischemic Blood–Brain Barrier Disruption","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Optical Imaging and Spectroscopy Techniques","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Sciences and Engineering Research Council; Institute for Biological Sciences","funders":"","keywords":"In vivo; Penumbra; Blood–brain barrier; Neuroprotection; Ex vivo; Ischemia; Medicine; Evans Blue; Pathology; Pharmacology; Biomedical engineering; Internal medicine; Central nervous system; Biology","score_opus":0.020790776903517782,"score_gpt":0.41789832059541654,"score_spread":0.39710754369189877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2281172512","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23981084,0.0003348501,0.73665184,0.00067400065,0.00006438013,0.00019053671,0.0000019710055,0.00004387009,0.022227744],"genre_scores_gemma":[0.16014299,0.00001866206,0.8390516,0.00066251366,0.000013777502,0.000021745695,0.0000021433057,0.000015446021,0.00007113708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867725,0.00035176735,0.00034699045,0.00028781564,0.00005550952,0.00028065467],"domain_scores_gemma":[0.99945265,0.00012674129,0.00004658424,0.00027467823,0.000033324504,0.000066046516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010872912,0.00012568556,0.00037200563,0.0002412361,0.0000074776776,0.000002259669,0.0000984288,0.00013692572,0.00013919166],"category_scores_gemma":[0.00092820375,0.00011065767,0.00007785685,0.00021468708,0.0002723527,0.00002853709,0.000066001274,0.000311738,0.0000013681422],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056643836,0.00014662524,0.029229337,0.000024116216,0.000012474095,0.00011617851,0.00012273724,8.2789e-8,0.958692,0.009664129,0.000041554806,0.0018940808],"study_design_scores_gemma":[0.00052435865,0.00018204567,0.0009933998,0.000052949326,0.0000326809,0.00006622621,0.000030564985,0.00025704195,0.98658323,0.010817317,0.00035789292,0.000102293794],"about_ca_topic_score_codex":0.00008180595,"about_ca_topic_score_gemma":0.0000016365557,"teacher_disagreement_score":0.102399774,"about_ca_system_score_codex":0.000028828437,"about_ca_system_score_gemma":0.000030076535,"threshold_uncertainty_score":0.45124888},"labels":[],"label_agreement":null},{"id":"W2282019676","doi":"10.1007/978-1-59745-426-1_15","title":"Interaction of HIV RNA With Peptides Detected by Acoustic Shear Wave Sensor Operated in an On-line Format","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Acoustic Wave Resonator Technologies","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Transactivation; Human immunodeficiency virus (HIV); Shear (geology); RNA; Acoustics; Materials science; Chemistry; Biology; Virology; Physics; Biochemistry; Gene expression; Composite material; Gene","score_opus":0.022875736167691382,"score_gpt":0.3424155488047872,"score_spread":0.3195398126370958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2282019676","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4640498,0.00009042683,0.53549075,0.0000074195964,0.00004521055,0.0001217449,0.000006501951,0.00011157805,0.000076578785],"genre_scores_gemma":[0.5954436,0.000018162975,0.4044625,0.000017658973,0.0000050923277,0.000009576892,0.000014150997,0.000025518077,0.0000037700522],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872714,0.00022703862,0.00039280014,0.00023215578,0.00006851355,0.00035233717],"domain_scores_gemma":[0.99929684,0.00027897017,0.000054956337,0.0002783372,0.00005312065,0.000037757243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064324215,0.00020378693,0.00033431136,0.00044127478,0.000012806837,0.000005859372,0.00014902253,0.00030833852,0.000008177207],"category_scores_gemma":[0.00042704973,0.00017376913,0.000026825432,0.000459104,0.000115146075,0.00004792647,0.00003820539,0.000444029,0.0000016931058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009728159,0.000038607144,0.00031755315,0.000028679136,0.000021154774,0.00006106463,0.00006855855,0.06919779,0.9101507,0.000030117175,0.000006335219,0.019982161],"study_design_scores_gemma":[0.00044822614,0.00040561802,0.00036899888,0.000047112746,0.0000091328975,0.000025907315,0.00038630774,0.23460373,0.7633822,0.00011538507,0.00003865263,0.00016873838],"about_ca_topic_score_codex":0.000022144466,"about_ca_topic_score_gemma":0.000038512106,"teacher_disagreement_score":0.16540594,"about_ca_system_score_codex":0.0001433169,"about_ca_system_score_gemma":0.000010572181,"threshold_uncertainty_score":0.70860994},"labels":[],"label_agreement":null},{"id":"W2282144513","doi":"10.1007/978-1-60327-009-0_11","title":"Genetic Dissection of Caenorhabditis elegans Embryogenesis Using RNA Interference and Flow Cytometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Caenorhabditis elegans; Biology; Embryonic stem cell; RNA interference; Cell biology; Embryogenesis; Flow cytometry; Genetic screen; Phenotype; Cell fate determination; Morphogenesis; Model organism; Genetics; Embryo; Gene; RNA; Transcription factor","score_opus":0.016788544056247353,"score_gpt":0.34552379708482256,"score_spread":0.3287352530285752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2282144513","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4919938,0.0014443715,0.50626427,0.00002354473,0.000117728785,0.00009321109,0.000006803764,0.0000057170646,0.000050567578],"genre_scores_gemma":[0.566209,0.00025174126,0.4333026,0.00013809733,0.000046275203,0.0000039433216,0.0000130861645,0.000015899093,0.000019314619],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980357,0.0005845699,0.0004122145,0.00055389316,0.00007153592,0.0003420717],"domain_scores_gemma":[0.9992367,0.000029891951,0.00013811546,0.0004288859,0.00008383921,0.000082572886],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004779626,0.00024445244,0.00035791437,0.00021932127,0.000049572736,0.00001458444,0.00024386126,0.00033330577,0.000012320497],"category_scores_gemma":[0.00022422317,0.00025654756,0.00009469973,0.00023896323,0.00018615685,0.000003498237,0.0001229619,0.00014429046,5.592063e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032802454,0.00005407897,0.0059776483,0.00001995,0.000032599888,0.00000853487,0.000108772125,0.00068469276,0.96234715,0.00006365035,0.000003765926,0.030666346],"study_design_scores_gemma":[0.00038148175,0.0006541417,0.014413365,0.000019314544,0.000044235745,0.00009400471,0.00005621101,0.0027988984,0.9794433,0.0016941129,0.000105020605,0.00029591043],"about_ca_topic_score_codex":0.00008197354,"about_ca_topic_score_gemma":0.000033393946,"teacher_disagreement_score":0.074215226,"about_ca_system_score_codex":0.000022977309,"about_ca_system_score_gemma":0.00005160267,"threshold_uncertainty_score":0.9999887},"labels":[],"label_agreement":null},{"id":"W2282515701","doi":"10.1007/978-1-60327-015-1_2","title":"Electrophoretic Mobility Shift Assays for the Analysis of DNA-Protein Interactions","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Electrophoretic mobility shift assay; Electrophoresis; DNA; Chemistry; Protein–protein interaction; Biophysics; Biochemistry; Biology; Gene","score_opus":0.012548214961624072,"score_gpt":0.37259152221898134,"score_spread":0.3600433072573573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2282515701","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4087,0.00054618664,0.5899365,0.00027434496,0.00004284589,0.00019902945,0.000017094892,0.000005193415,0.00027884255],"genre_scores_gemma":[0.8600107,0.00003251668,0.13940859,0.00026625182,0.000036330057,0.00007538061,0.00009413379,0.000010506994,0.00006562519],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854916,0.00035871504,0.00035297847,0.00041048983,0.000052228632,0.00027645112],"domain_scores_gemma":[0.9989953,0.00013098658,0.00013395784,0.0006320408,0.00006848807,0.000039237726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009068955,0.00016209477,0.00032601936,0.00010623611,0.000047110585,0.0000071834706,0.00035948493,0.00020840767,0.000028920022],"category_scores_gemma":[0.0006045596,0.00012642557,0.00034392742,0.0004210972,0.00017020655,0.0000015162757,0.000064528984,0.0001495991,3.6572234e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102695,0.000093257324,0.0003670559,0.000006480432,0.00033282847,7.2557725e-7,0.00001956243,0.00010158611,0.98803216,0.0011836125,0.000019917548,0.009740131],"study_design_scores_gemma":[0.00024952609,0.00024407828,0.002397287,0.0000035959665,0.00026075463,0.000001962048,0.000021382531,0.000571628,0.98610157,0.006948608,0.0030617234,0.00013788386],"about_ca_topic_score_codex":0.000016364022,"about_ca_topic_score_gemma":0.000016092787,"teacher_disagreement_score":0.4513107,"about_ca_system_score_codex":0.000020829872,"about_ca_system_score_gemma":0.000040550654,"threshold_uncertainty_score":0.5155485},"labels":[],"label_agreement":null},{"id":"W2283698165","doi":"10.1007/978-1-59745-385-1_5","title":"The Design of Randomized Controlled Trials","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Memorial University of Newfoundland","funders":"","keywords":"Randomized controlled trial; Computer science; Medicine; Internal medicine","score_opus":0.6482471377895995,"score_gpt":0.611383858595071,"score_spread":0.036863279194528475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2283698165","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[7.37946e-8,0.5213612,0.47204667,0.00046048217,0.0006325154,0.0049603805,0.00004422864,0.000009131397,0.00048537226],"genre_scores_gemma":[7.651534e-8,0.6734518,0.32337612,0.000447336,0.00010608323,0.002398874,0.000021534888,0.000040758394,0.00015741502],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.77144045,0.18991898,0.036703464,0.0010895148,0.00009570258,0.00075191155],"domain_scores_gemma":[0.8029614,0.17580158,0.020040974,0.0010229067,0.000085108724,0.0000879911],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.41723305,0.00053525984,0.038782116,0.00088822277,0.00011798317,0.00003139474,0.00083960366,0.00089378224,0.00009876959],"category_scores_gemma":[0.32914853,0.00036118203,0.003975262,0.00036351493,0.00053193007,0.000034157714,0.000104874605,0.00049617485,0.0001306394],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.006352113,0.0001575969,0.0000075018393,0.00580866,0.007537568,0.000009685474,0.00038003095,0.00013262613,0.000006107299,0.67302066,0.002325232,0.30426225],"study_design_scores_gemma":[0.05733523,0.000057409332,1.3675037e-7,0.001061375,0.00031573314,0.000016871596,0.000020734855,0.00062073494,0.000002353322,0.07588898,0.86427015,0.00041026436],"about_ca_topic_score_codex":0.00011960285,"about_ca_topic_score_gemma":0.0000027319143,"teacher_disagreement_score":0.861945,"about_ca_system_score_codex":0.00029771923,"about_ca_system_score_gemma":0.0005924015,"threshold_uncertainty_score":0.999884},"labels":[],"label_agreement":null},{"id":"W2286289818","doi":"10.1007/7651_2013_57","title":"Efficient Production of Photoreceptor Precursor Cells from Human Embryonic Stem Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Embryoid body; Embryonic stem cell; Retinitis pigmentosa; Stem cell; Cell biology; Transplantation; Biology; Chemistry; Medicine; Retinal; Adult stem cell; Internal medicine; Genetics; Biochemistry","score_opus":0.012156806197286917,"score_gpt":0.3130018908243316,"score_spread":0.3008450846270447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2286289818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92004,0.0007925594,0.077364564,0.00006033096,0.00068450026,0.0005640541,0.0000072961784,0.000011568943,0.00047511832],"genre_scores_gemma":[0.52179605,0.00010398482,0.47623745,0.00015753738,0.000100958576,0.00020755644,0.00013246719,0.00005234673,0.0012116405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99788415,0.00070942054,0.0003994188,0.0005981271,0.00008679669,0.00032206776],"domain_scores_gemma":[0.9992086,0.000031443626,0.00018459841,0.000419376,0.00009466138,0.000061283456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005310385,0.00022229517,0.00030097025,0.0001106463,0.000037493537,0.00001020152,0.00028214353,0.00028387338,0.00010775217],"category_scores_gemma":[0.000058508384,0.00020627503,0.0001201702,0.00016688752,0.00017497859,0.0000018525798,0.00014853777,0.00012642353,0.000026092948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003209026,0.000102623366,0.001086785,0.000018959892,0.000043368877,6.798397e-7,0.00007027605,0.00023722772,0.9926012,0.000055608503,0.0003934895,0.005357686],"study_design_scores_gemma":[0.00036568881,0.00021466358,0.0005517652,0.000015497117,0.000013387056,8.1478754e-7,0.000089781905,0.000090442576,0.99447006,0.00050694775,0.0034490481,0.00023193256],"about_ca_topic_score_codex":0.00011809506,"about_ca_topic_score_gemma":0.000011567475,"teacher_disagreement_score":0.39887288,"about_ca_system_score_codex":0.00002185999,"about_ca_system_score_gemma":0.000051772517,"threshold_uncertainty_score":0.8411652},"labels":[],"label_agreement":null},{"id":"W2288122858","doi":"10.1007/978-1-61779-376-9_38","title":"Detection and Characterization of Transcription Termination","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Cleavage factor; Cleavage and polyadenylation specificity factor; RNA polymerase II; Polyadenylation; Transcription (linguistics); Termination factor; Transcription factor II D; Biology; Molecular biology; Terminator (solar); Cell biology; RNA; Genetics; Gene expression; RNA polymerase; Gene; Promoter","score_opus":0.02671540518579301,"score_gpt":0.3575850389140827,"score_spread":0.3308696337282897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2288122858","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5420195,0.000059468566,0.45770591,0.000005717629,0.000028972348,0.00006719845,0.0000013260916,0.0000020530504,0.00010984429],"genre_scores_gemma":[0.8950084,0.00010920439,0.104733616,0.00003336212,0.000012847335,0.000017730934,0.000028253002,0.000007696048,0.000048908507],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913716,0.0003792998,0.00015615857,0.00018311915,0.00002850327,0.00011575371],"domain_scores_gemma":[0.9997637,0.000006214833,0.00005201792,0.00011533907,0.000037841957,0.00002483692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050286355,0.00006494989,0.00009649314,0.0001045961,0.000015633279,0.000002380758,0.000057140613,0.00013441929,0.000005927014],"category_scores_gemma":[0.00008754494,0.000063755324,0.000027584623,0.00008425637,0.000069057685,0.0000031632094,0.000025941645,0.000054339976,2.4093956e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056605146,0.00001893911,0.0019048491,0.000011949109,0.00000708107,8.3145557e-7,0.000051194034,2.154141e-7,0.9135027,0.0001791096,6.8964965e-8,0.08426644],"study_design_scores_gemma":[0.00022144054,0.00028196833,0.023127252,0.0000050923713,0.0000040103187,0.0000065866693,0.00001426418,0.00021978293,0.97538346,0.0005285279,0.00014760417,0.000059989197],"about_ca_topic_score_codex":0.000033193293,"about_ca_topic_score_gemma":0.000013516508,"teacher_disagreement_score":0.3529889,"about_ca_system_score_codex":0.000005412539,"about_ca_system_score_gemma":0.00001011269,"threshold_uncertainty_score":0.25998664},"labels":[],"label_agreement":null},{"id":"W2290315896","doi":"10.1007/978-1-62703-989-5_19","title":"Analysis of Chondrogenesis Using Micromass Cultures of Limb Mesenchyme","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chondrogenesis; Mesenchyme; Mesenchymal stem cell; Chondrocyte; Biology; Cell biology; Embryonic stem cell; Phenotype; Limb bud; Mesoderm; Anatomy; Embryo; Genetics; Cartilage; Gene","score_opus":0.02389607380315963,"score_gpt":0.4030171239797297,"score_spread":0.3791210501765701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2290315896","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72080415,0.0011305239,0.27755126,0.000030305391,0.000062761224,0.0001219635,0.0000068446425,0.0000070177375,0.00028517682],"genre_scores_gemma":[0.3145241,0.000024599927,0.68528074,0.000083510095,0.000009966385,0.000005882823,0.00003005894,0.000009615501,0.00003150047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853396,0.0006521437,0.00034150053,0.00023493129,0.00006585905,0.00017157859],"domain_scores_gemma":[0.9993279,0.000112256064,0.00014379522,0.00030108934,0.000070869806,0.00004407082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005851902,0.000121487814,0.00073457626,0.00048332385,0.000011798807,0.0000013513352,0.00007764403,0.00017622713,0.000040046605],"category_scores_gemma":[0.00025068774,0.00009917657,0.00028021343,0.0006600194,0.000096653916,0.000008365093,0.000041953594,0.00006168157,4.617697e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004753684,0.00008244422,0.019687258,0.000022289356,0.0003702658,0.000009331228,0.00006672236,0.000027933114,0.9647495,0.0013764275,5.218589e-7,0.013559762],"study_design_scores_gemma":[0.00081831915,0.0007583645,0.0009585516,0.00002540221,0.0013401201,0.000011327987,0.000037710794,0.0005337914,0.99439836,0.0008120217,0.00022651405,0.000079540696],"about_ca_topic_score_codex":0.00006288601,"about_ca_topic_score_gemma":0.00001771115,"teacher_disagreement_score":0.4077295,"about_ca_system_score_codex":0.000019985511,"about_ca_system_score_gemma":0.000023460336,"threshold_uncertainty_score":0.40443033},"labels":[],"label_agreement":null},{"id":"W2291697536","doi":"10.1007/978-1-0716-4502-4","title":"Activity-Based Proteomics","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Oncode Institute; Universiteit Antwerpen; University of Hong Kong; King Saud University; Universiteit Leiden; Durham University; University of Oxford; University of Ottawa; Helsinki Institute of Life Science, Helsingin Yliopisto; Alfaisal University; Jordan University of Science and Technology; King Faisal Specialist Hospital and Research Centre; Texas Woman's University; Chinese Academy of Medical Sciences; Helsingin Yliopisto; Universitetet i Tromsø; Stony Brook University; University of Minnesota; College of Medicine, King Saud University; University of Jordan; Boston College; Massachusetts General Hospital","keywords":"Lung cancer; Disease; Proteomics; Medicine; Stage (stratigraphy); Oncology; Clinical significance; Cancer; Internal medicine; Biology","score_opus":0.020488432639461682,"score_gpt":0.40660634681690483,"score_spread":0.3861179141774431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2291697536","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000012674817,0.00019494513,0.7379167,0.00013984516,0.000033256518,0.00037114762,0.000077604316,0.00011303538,0.2611408],"genre_scores_gemma":[0.0000028253535,0.000046817695,0.84653974,0.00027035858,0.000042179858,0.00093100825,0.00019625323,0.000048960268,0.15192187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984468,0.00016359308,0.00033991024,0.0006846556,0.000054497006,0.0003104931],"domain_scores_gemma":[0.99848205,0.0002663433,0.00024758684,0.0009093534,0.000051095867,0.000043596425],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040388986,0.0003548963,0.00056017394,0.00019734945,0.00004395071,0.000010844421,0.0005229357,0.0012367342,0.00013703802],"category_scores_gemma":[0.00018046173,0.00038544703,0.00019682833,0.000117014955,0.00016201922,0.000009252902,0.0002073601,0.0011039891,0.0000044258627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023290959,0.000038849073,0.000008966519,0.00018994873,0.00002620148,0.000009817176,0.0000023991222,0.000034716486,0.9293724,0.043822225,0.00021451089,0.026256695],"study_design_scores_gemma":[0.00015132569,0.0000110422825,1.1071262e-7,0.0000977245,0.00001952544,0.0000012467844,3.631611e-7,0.00019399272,0.6286679,0.20013306,0.1704768,0.0002469268],"about_ca_topic_score_codex":0.000010167746,"about_ca_topic_score_gemma":0.0000025300858,"teacher_disagreement_score":0.30070448,"about_ca_system_score_codex":0.00032703282,"about_ca_system_score_gemma":0.00052120915,"threshold_uncertainty_score":0.99985975},"labels":[],"label_agreement":null},{"id":"W2297862035","doi":"10.1007/978-1-4939-0473-0_31","title":"LPS Quantitation Procedures","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Lipopolysaccharide; Pseudomonas aeruginosa; Lipid A; Virulence; Bacterial outer membrane; Microbiology; Bacteria; Virulence factor; Cell envelope; Chemistry; Mutant; Cell wall; Secretion; Biology; Biochemistry; Escherichia coli; Gene; Immunology","score_opus":0.015705330683798254,"score_gpt":0.3878907796403888,"score_spread":0.37218544895659056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2297862035","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29945663,0.00032229678,0.6980099,0.000095441945,0.00019382645,0.00012323493,0.0000017989178,0.000012508895,0.001784354],"genre_scores_gemma":[0.37378246,0.00005158154,0.6254332,0.00042716987,0.00007907067,0.00001553895,0.000055888704,0.000023113187,0.00013194194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979667,0.0009324181,0.00028439672,0.00046757926,0.000051872812,0.00029700506],"domain_scores_gemma":[0.9993334,0.000057203557,0.000097930926,0.0004107835,0.00005463255,0.000046063353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010159726,0.00016672263,0.00021243904,0.00008943391,0.000033519365,0.000014496433,0.00025561373,0.00027346943,0.000016340298],"category_scores_gemma":[0.0017297716,0.0001589827,0.00007439599,0.00013736768,0.00015003732,0.000002160187,0.00009585191,0.00009980204,0.000010600888],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042715877,0.000027444341,0.018076418,0.000020649211,0.000016117734,0.000001624615,0.000014387421,0.000027698594,0.9651482,0.010409618,0.00008086101,0.006134271],"study_design_scores_gemma":[0.0006000794,0.0004076226,0.015600229,0.00002554108,0.000013471932,0.00001823775,0.000043421616,0.00024459793,0.9419023,0.013327925,0.027439978,0.00037660458],"about_ca_topic_score_codex":0.000012097724,"about_ca_topic_score_gemma":0.000035570567,"teacher_disagreement_score":0.07432584,"about_ca_system_score_codex":0.000012595245,"about_ca_system_score_gemma":0.000049167917,"threshold_uncertainty_score":0.6483127},"labels":[],"label_agreement":null},{"id":"W2298387303","doi":"10.1007/978-1-4939-2639-8_16","title":"Imaging and Analysis of Mitochondrial Dynamics in Living Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dynamism; Mitochondrion; Live cell imaging; Organelle; Biology; Cell biology; Cytoplasm; Computational biology; Cell; Genetics; Physics","score_opus":0.011927868390786646,"score_gpt":0.3425077530848431,"score_spread":0.33057988469405647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2298387303","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28405616,0.00061247393,0.71472543,0.000025088311,0.00013940211,0.00008438203,0.000011538136,0.0000030084384,0.00034251116],"genre_scores_gemma":[0.4821743,0.000105774605,0.5174762,0.00013254683,0.000018689758,0.000017749438,0.000038262067,0.000014998282,0.000021470352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986235,0.00044903895,0.00028489286,0.00036656574,0.000048996986,0.00022700673],"domain_scores_gemma":[0.9994784,0.000057649,0.00009370208,0.0002556532,0.000050712322,0.00006386576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087060785,0.00012885318,0.0003317337,0.00030826867,0.00000903325,0.0000061488545,0.0001654587,0.00015340054,0.0000036643569],"category_scores_gemma":[0.0005236891,0.00012826073,0.000076005475,0.00041030333,0.000091592425,0.0000020599243,0.00020004017,0.000090084985,1.7310454e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029385652,0.000038448543,0.005798998,0.000008423397,0.0000650133,0.0000058504606,0.00006535731,0.00014324626,0.9888892,0.0008814018,0.0000012322255,0.004073399],"study_design_scores_gemma":[0.00035645877,0.0001077517,0.00014982534,0.000014056829,0.00009185026,0.000006036137,0.00027077415,0.017063184,0.9788323,0.0026793885,0.00026399843,0.00016439134],"about_ca_topic_score_codex":0.00013998778,"about_ca_topic_score_gemma":0.00021873352,"teacher_disagreement_score":0.19811817,"about_ca_system_score_codex":0.000029721505,"about_ca_system_score_gemma":0.000059027156,"threshold_uncertainty_score":0.52303207},"labels":[],"label_agreement":null},{"id":"W2298602981","doi":"10.1007/978-1-4939-3372-3_23","title":"Methylated DNA Immunoprecipitation Analysis of Mammalian Endogenous Retroviruses","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"","keywords":"Methylated DNA immunoprecipitation; Endogenous retrovirus; DNA methylation; Endogeny; Immunoprecipitation; Biology; Histone; Chromatin immunoprecipitation; Epigenetics; DNA; Retrovirus; Molecular biology; Genome; Gene; Genetics; Gene expression; Promoter; Biochemistry","score_opus":0.03985894680390372,"score_gpt":0.3345701937102517,"score_spread":0.294711246906348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2298602981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9473687,0.00027548955,0.051307246,0.00036378592,0.000084327476,0.00011016844,0.000068764675,0.000018103323,0.0004034564],"genre_scores_gemma":[0.8983542,0.000036660666,0.10142319,0.00006704657,0.00001590495,0.000016184465,0.000046535195,8.2604794e-7,0.000039494316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981986,0.0009744272,0.00031990506,0.00025695833,0.00005987554,0.00019019081],"domain_scores_gemma":[0.99913216,0.00056230585,0.00010665905,0.00009493868,0.00007092315,0.000033012126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064336474,0.00009851371,0.00028811427,0.00008490306,0.000034445704,0.0000054267225,0.00019578934,0.00013702994,0.00047378588],"category_scores_gemma":[0.0004028106,0.000034536035,0.00015926195,0.0011514045,0.00007586993,0.00002015986,0.000056811623,0.000043563676,0.0000046782166],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012691373,0.000033620498,0.01062936,7.568646e-7,0.00013024565,0.0000018359469,0.000042920958,0.00001401088,0.89197934,0.0015366481,3.2123666e-7,0.09561825],"study_design_scores_gemma":[0.00016397038,0.00025234552,0.13573651,0.0000052850505,0.00016690853,0.0000019785552,0.00003524637,0.000042685602,0.85346496,0.009147726,0.0008510452,0.00013131276],"about_ca_topic_score_codex":0.0004043476,"about_ca_topic_score_gemma":0.000423173,"teacher_disagreement_score":0.12510715,"about_ca_system_score_codex":0.00002188328,"about_ca_system_score_gemma":0.0000069643743,"threshold_uncertainty_score":0.5187623},"labels":[],"label_agreement":null},{"id":"W2301880294","doi":"10.1007/978-1-4939-3139-2_12","title":"Dextran Sulfate Sodium (DSS)-Induced Acute Colitis in the Rat","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":83,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Colitis; Ulcerative colitis; Inflammatory bowel disease; Immune system; Medicine; Inflammatory Bowel Diseases; Simplicity; Immunology; Disease; Animal model; Pharmacology; Pathology; Internal medicine","score_opus":0.030208133503905978,"score_gpt":0.3765331548753025,"score_spread":0.3463250213713965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2301880294","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91432554,0.00042224803,0.08159044,0.00044757192,0.0004805965,0.00055326434,0.000016123122,0.000017139977,0.0021470804],"genre_scores_gemma":[0.8467185,0.00006442507,0.14912361,0.0031461301,0.00019940385,0.00031198296,0.00020127892,0.00006561182,0.00016904947],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9948082,0.003510736,0.00041316502,0.00057129894,0.00012002172,0.0005765912],"domain_scores_gemma":[0.9988584,0.000055085704,0.00009591409,0.0007630369,0.000086892025,0.00014069337],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026589339,0.0002757495,0.00028234965,0.00013844558,0.000041940624,0.000026004851,0.0005845273,0.00040214288,0.0000109466955],"category_scores_gemma":[0.0005943288,0.0002273947,0.00013678322,0.00024582294,0.00017961691,0.0000043803543,0.00019073696,0.00028746919,0.000016144471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004019097,0.000082590326,0.007253773,0.000009945153,0.000051093637,0.0007624354,0.00021650788,0.00003150117,0.9860652,0.0021829305,0.00024038713,0.002701693],"study_design_scores_gemma":[0.005723849,0.0007396449,0.03737637,0.000025653202,0.00010376887,0.00024011715,0.0005715743,0.00028432306,0.90379256,0.016035313,0.034008443,0.0010983917],"about_ca_topic_score_codex":0.00005737139,"about_ca_topic_score_gemma":0.00019855733,"teacher_disagreement_score":0.08227268,"about_ca_system_score_codex":0.000045469587,"about_ca_system_score_gemma":0.00022433679,"threshold_uncertainty_score":0.9272887},"labels":[],"label_agreement":null},{"id":"W2302648836","doi":"10.1007/978-1-4939-3578-9_3","title":"Study Design for Sequencing Studies","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"DNA sequencing; Computational biology; Computer science; Genomics; Biology; Genome; DNA; Genetics; Gene","score_opus":0.15041183459310709,"score_gpt":0.48254811198058606,"score_spread":0.332136277387479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2302648836","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0717088,0.0013025142,0.92590886,0.00017129128,0.00024889703,0.00057843834,0.0000029598189,0.0000113488095,0.00006687911],"genre_scores_gemma":[0.27283898,0.00014583948,0.72569305,0.0002669736,0.00007738296,0.0006202615,0.000005255021,0.000023145198,0.0003291272],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978696,0.0011025848,0.00025387565,0.0004920402,0.000041840525,0.00024006594],"domain_scores_gemma":[0.99926555,0.00013270488,0.00008398383,0.0003837279,0.00009716713,0.000036869867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014887748,0.00014274177,0.00020398012,0.00009594555,0.0000422015,0.0000049539867,0.00019689926,0.00013606346,0.0000045349234],"category_scores_gemma":[0.0010252232,0.000096083444,0.00006753057,0.00010790431,0.000085000975,0.000001746501,0.00009705842,0.000039968323,0.000001690131],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007881488,0.000036638452,0.0012194401,0.0000045549914,0.000056515342,0.0000019192682,0.00008754388,0.000024597466,0.96557224,0.0004943046,0.00015856953,0.03226484],"study_design_scores_gemma":[0.001097039,0.0009120809,0.00014260315,0.000014097636,0.0000149843045,0.0000037802945,0.0006983937,0.000009074991,0.9845043,0.005675412,0.0067610084,0.00016723573],"about_ca_topic_score_codex":0.0000017295225,"about_ca_topic_score_gemma":0.0000035769726,"teacher_disagreement_score":0.20113018,"about_ca_system_score_codex":0.000048363592,"about_ca_system_score_gemma":0.00007310051,"threshold_uncertainty_score":0.3918169},"labels":[],"label_agreement":null},{"id":"W2303287204","doi":"10.1007/978-1-4939-1034-2_1","title":"1D4: A Versatile Epitope Tag for the Purification and Characterization of Expressed Membrane and Soluble Proteins","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":56,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Eye Institute; Canadian Institutes of Health Research","keywords":"Epitope; Monoclonal antibody; Polyclonal antibodies; Immunoprecipitation; Linear epitope; Epitope mapping; Immunoelectron microscopy; Molecular biology; Biochemistry; Blot; Immunofluorescence; Affinity chromatography; Membrane protein; Chemistry; Antibody; Peptide; Biology; Protein tag; Myc-tag; Membrane; Fusion protein; Gene; Recombinant DNA; Enzyme; Genetics","score_opus":0.0336048221206035,"score_gpt":0.39146708011382664,"score_spread":0.35786225799322313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2303287204","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44507548,0.0003706689,0.55115575,0.0025102873,0.00004682673,0.0007299706,0.00000932005,0.0000051735196,0.000096531636],"genre_scores_gemma":[0.41208637,0.0007242122,0.5858975,0.00041897784,0.000082758095,0.00031929984,0.00009736724,0.000017617594,0.00035587212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914485,0.00035118117,0.00016040326,0.00016823245,0.000049450453,0.00012590109],"domain_scores_gemma":[0.9993496,0.00036328982,0.000057336136,0.00014258124,0.000054933706,0.000032291937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009725,0.00006674866,0.0001921191,0.000062089384,0.00003867455,0.0000051586735,0.000055863464,0.000077376135,0.000014184344],"category_scores_gemma":[0.00040400872,0.000043708184,0.00002636719,0.00007163647,0.00015909893,0.000013984489,0.000044543835,0.00007913406,2.8524985e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019577597,0.00002206345,0.0016859586,0.00011940637,0.000019253068,3.9970726e-7,0.000111361886,5.3903733e-7,0.93240964,0.0044980138,0.0000020863065,0.060935516],"study_design_scores_gemma":[0.0007484936,0.00035258892,0.015110505,0.000027102142,0.000023826935,0.000007144567,0.000019269612,0.005504682,0.96238524,0.0023168551,0.013446095,0.000058200825],"about_ca_topic_score_codex":0.000051790277,"about_ca_topic_score_gemma":0.000001951308,"teacher_disagreement_score":0.060877316,"about_ca_system_score_codex":0.0000047601006,"about_ca_system_score_gemma":0.000017628736,"threshold_uncertainty_score":0.1782368},"labels":[],"label_agreement":null},{"id":"W2306469609","doi":"10.1007/978-1-61779-992-1_24","title":"Multicolor Fluorescent In Situ mRNA Hybridization (FISH) on Whole Mounts and Sections","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Wellcome Trust","keywords":"In situ hybridization; Biology; Molecular biology; Messenger RNA; Gene expression; In situ; Fluorophore; Xenopus; Fluorescence in situ hybridization; Fish <Actinopterygii>; RNA; Fluorescence; Gene; Genetics; Chemistry; Optics; Chromosome","score_opus":0.014653917726955647,"score_gpt":0.3528531424311922,"score_spread":0.3381992247042366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2306469609","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8925483,0.0005346676,0.10562897,0.00021188117,0.00031689968,0.0002560675,0.0000073829005,0.000009166546,0.00048663735],"genre_scores_gemma":[0.86693484,0.000096773256,0.13186783,0.0006485278,0.000071432136,0.00005563083,0.00023289502,0.000015466612,0.00007664094],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835294,0.00068284775,0.0002451698,0.00034902184,0.000039578357,0.00033042004],"domain_scores_gemma":[0.9996292,0.000036497895,0.00006141567,0.00018628461,0.000023394057,0.00006319327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075343816,0.00016142464,0.00017289529,0.00015844336,0.000047888363,0.0000064689984,0.00008582991,0.0003083569,0.000005167637],"category_scores_gemma":[0.0002312996,0.00015729893,0.000037121128,0.00015917637,0.000105994455,0.0000053151502,0.00010404922,0.0001343535,0.00000629585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006390348,0.00011153024,0.045819484,0.0000059988693,0.000017143955,0.000001747728,0.000057582896,0.0000917298,0.9421238,0.00033117415,0.00003335116,0.011342581],"study_design_scores_gemma":[0.00059585535,0.00015148998,0.11574472,0.000009623073,0.0000059283175,0.00001636181,0.000032600252,0.00008186296,0.87619466,0.00037304236,0.0066100205,0.00018381655],"about_ca_topic_score_codex":0.000014739507,"about_ca_topic_score_gemma":0.000079311205,"teacher_disagreement_score":0.06992523,"about_ca_system_score_codex":0.000045974353,"about_ca_system_score_gemma":0.000024174864,"threshold_uncertainty_score":0.6414464},"labels":[],"label_agreement":null},{"id":"W2309028480","doi":"10.1007/978-1-62703-059-5_23","title":"Partial Least Squares Methods: Partial Least Squares Correlation and Partial Least Square Regression","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spectroscopy and Chemometric Analyses","field":"Chemistry","cited_by":440,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Baycrest Hospital","funders":"","keywords":"Partial least squares regression; Latent variable; Mathematics; Statistics; Partial correlation; Covariance; Multivariate statistics; Data set; Set (abstract data type); Correlation; Computer science","score_opus":0.03617235603248909,"score_gpt":0.42665000973953515,"score_spread":0.39047765370704607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2309028480","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.100331254,0.008944801,0.8878505,0.0002808981,0.0006210495,0.00019930144,0.00003363135,0.00014283032,0.001595715],"genre_scores_gemma":[0.65624243,0.00015963435,0.34209386,0.00018173842,0.0007184283,0.00013231965,0.00014807694,0.00007834474,0.00024513894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99441504,0.0022491538,0.0009194019,0.0009653029,0.00026962088,0.0011814688],"domain_scores_gemma":[0.99755484,0.00082979235,0.0004427785,0.0007215092,0.00010130907,0.00034977027],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0021411888,0.0006099642,0.0009818992,0.0004038614,0.00025863954,0.000068576024,0.00039393493,0.0008928785,0.0013030245],"category_scores_gemma":[0.0020417508,0.0005371472,0.00028929044,0.0007961654,0.00050944625,0.00020563346,0.00032274408,0.00084067794,0.000030309679],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037892832,0.00032955644,0.084838204,0.00012637899,0.00018414804,0.000023404233,0.0005854786,0.00015292568,0.8547718,0.0035014418,0.000111748115,0.05499598],"study_design_scores_gemma":[0.0012693203,0.0001749472,0.0014279907,0.000079460726,0.00037238203,0.00007064843,0.0010179724,0.0043642125,0.978386,0.0012865107,0.010813468,0.00073712727],"about_ca_topic_score_codex":0.0001874637,"about_ca_topic_score_gemma":0.000010781628,"teacher_disagreement_score":0.5559112,"about_ca_system_score_codex":0.00014105272,"about_ca_system_score_gemma":0.000072633346,"threshold_uncertainty_score":0.999708},"labels":[],"label_agreement":null},{"id":"W2310308618","doi":"10.1007/978-1-4939-1568-2_24","title":"Measurement of Mast Cell Surface Molecules by High-Throughput Immunophenotyping Using Transcription (HIT)","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; U.S. Public Health Service","keywords":"Antigen; Biology; Mast cell; Transcription (linguistics); Monoclonal antibody; Transcription factor; Oligonucleotide; Immunophenotyping; Molecular biology; Cell biology; Computational biology; Antibody; Biochemistry; Gene; Immunology","score_opus":0.020215826709235264,"score_gpt":0.2952144544720506,"score_spread":0.2749986277628153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2310308618","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19366947,0.010000041,0.7949088,0.00005116139,0.00052874384,0.00018411005,0.000015718915,0.000022017228,0.0006199314],"genre_scores_gemma":[0.6165444,0.00007205224,0.3830937,0.000096868695,0.000008910975,0.000006566511,0.000056393827,0.000027919661,0.00009313021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959213,0.0024966295,0.00060787995,0.0004723186,0.000049737824,0.0004521103],"domain_scores_gemma":[0.9991439,0.00008565533,0.0002372114,0.00040245996,0.000109252025,0.000021510803],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020405378,0.00026379025,0.00058651174,0.0001234798,0.00007914671,0.000006243239,0.0002807114,0.00040744696,0.00016622538],"category_scores_gemma":[0.000106930034,0.00025783578,0.00012590975,0.00017777714,0.00029267927,0.00002680408,0.00007763632,0.00030652763,0.000012925362],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010436868,0.00014250683,0.00019440055,0.00006646738,0.000062449915,0.0000012517008,0.000115225026,0.00044773862,0.99157614,0.0020331393,0.0000201781,0.005236159],"study_design_scores_gemma":[0.0013448882,0.00023900015,0.00015497995,0.000042589414,0.000053529453,0.0000068541167,0.000053457163,0.00024998933,0.9875783,0.0010435298,0.008977692,0.00025524493],"about_ca_topic_score_codex":0.00088433654,"about_ca_topic_score_gemma":0.00002005057,"teacher_disagreement_score":0.422875,"about_ca_system_score_codex":0.00008453114,"about_ca_system_score_gemma":0.000040639283,"threshold_uncertainty_score":0.99998736},"labels":[],"label_agreement":null},{"id":"W2312596227","doi":"10.1007/978-1-62703-718-1_19","title":"Noninvasive In Vivo Monitoring of Extracellular Vesicles","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Cancer Institute; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Microvesicles; Luciferase; Extracellular vesicles; Cell biology; Microvesicle; In vivo; Bioluminescence; Vesicle; Extracellular; Intracellular; Chemistry; Extracellular vesicle; Cell; Exosome; microRNA; Biology; Biochemistry; Transfection; Gene; Membrane","score_opus":0.017191486706552645,"score_gpt":0.34648039580103324,"score_spread":0.3292889090944806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2312596227","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79913604,0.006684678,0.19306071,0.00004694725,0.0001754397,0.00037187,0.000006168426,0.00000968728,0.00050844596],"genre_scores_gemma":[0.5512432,0.00013764262,0.4482465,0.000044420194,0.000056007593,0.00010732566,0.0000120817,0.0000356337,0.0001172067],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971905,0.001036327,0.0006103386,0.0005910199,0.00009562908,0.00047621818],"domain_scores_gemma":[0.9988721,0.000096901145,0.00017568018,0.0006654241,0.00008821391,0.00010168927],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008913672,0.00025690976,0.000372666,0.00022336237,0.00002132377,0.000011564983,0.00046344168,0.0003726399,0.00008078545],"category_scores_gemma":[0.0006232517,0.0002705447,0.00014796016,0.00029220205,0.00024840352,0.000006930802,0.0002461274,0.00021352067,0.00000868918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002535065,0.00012623443,0.061098367,0.000030492598,0.000027464683,0.00004702594,0.000055467277,0.00016281332,0.93107414,0.0005394585,0.000017567616,0.0067956373],"study_design_scores_gemma":[0.00060188543,0.00015371588,0.003869475,0.000036517686,0.000010389306,0.000014355242,0.00015484446,0.00010606175,0.98986185,0.004240226,0.0006872829,0.00026341525],"about_ca_topic_score_codex":0.00011550762,"about_ca_topic_score_gemma":0.000009017234,"teacher_disagreement_score":0.25518578,"about_ca_system_score_codex":0.000032148906,"about_ca_system_score_gemma":0.00007509973,"threshold_uncertainty_score":0.99997467},"labels":[],"label_agreement":null},{"id":"W23154186","doi":"10.1007/978-1-59745-395-0_6","title":"Isolation, Expansion, and Characterization of Human Natural and Adaptive Regulatory T Cells","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"IL-2 receptor; Cell biology; FOXP3; Biology; Regulatory T cell; Population; Acquired immune system; T cell; Immunology; Antigen; Immune system; Medicine","score_opus":0.031042100224614476,"score_gpt":0.3571733674581084,"score_spread":0.32613126723349395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W23154186","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004744041,0.95359886,0.040245052,0.000006982813,0.0007477012,0.0005412126,0.000029298833,0.000025893549,0.00006095797],"genre_scores_gemma":[0.00067243737,0.96000457,0.038038876,0.00006789273,0.000027860806,0.00004101705,0.0006337499,0.000052246178,0.00046133218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99497813,0.0029661185,0.00096223183,0.00067772635,0.000021975982,0.00039382177],"domain_scores_gemma":[0.99846613,0.0003972242,0.00062759354,0.00040164843,0.00008513086,0.00002226542],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011826837,0.00045415276,0.0017589687,0.0006000381,0.000095854004,0.0000056770414,0.00023107248,0.001538912,0.000044880533],"category_scores_gemma":[0.00007039304,0.0003847721,0.00016587318,0.0002691556,0.00086229795,0.000035249537,0.00026539687,0.00076775113,0.0000072589814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017691116,0.000031504333,0.000013197765,0.0004224782,0.00013224305,0.0000046575033,0.000067123554,1.5790642e-8,0.6941257,0.001388466,0.0000035557925,0.30379337],"study_design_scores_gemma":[0.0012818525,0.00069988205,0.00013563225,0.00172211,0.00057541847,0.00026681315,0.00006695535,0.0000029918635,0.5491309,0.0012907796,0.4438806,0.0009460471],"about_ca_topic_score_codex":0.000030460104,"about_ca_topic_score_gemma":0.0000048855163,"teacher_disagreement_score":0.443877,"about_ca_system_score_codex":0.000040056526,"about_ca_system_score_gemma":0.00007229015,"threshold_uncertainty_score":0.9998604},"labels":[],"label_agreement":null},{"id":"W2315853796","doi":"10.1007/978-1-4939-1047-2","title":"Cardiac Tissue Engineering","year":2014,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Tissue engineering; Medicine; Cardiology; Computer science; Internal medicine; Biomedical engineering; Engineering","score_opus":0.014601997635381123,"score_gpt":0.3739817570080772,"score_spread":0.35937975937269606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2315853796","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000028956869,0.035696927,0.9291701,0.00023869083,0.0018710211,0.00040627125,0.000007965216,0.00011248436,0.032467626],"genre_scores_gemma":[0.000011309427,0.00012059912,0.5808477,0.00008164665,0.00079434953,0.00004065971,0.00016901543,0.000096341755,0.4178384],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99823296,0.00033129292,0.0004081386,0.0005222361,0.00011498912,0.00039038583],"domain_scores_gemma":[0.9989262,0.00023582911,0.0000808238,0.000553826,0.000054350283,0.00014896633],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010285525,0.0004240664,0.0013198896,0.00046194636,0.000014406511,0.0000040125315,0.00013735797,0.0008168345,0.00007219509],"category_scores_gemma":[0.00055033184,0.00036107667,0.00017759677,0.00012883256,0.00010671476,0.0000049757527,0.00007260641,0.0009536534,0.00003322271],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013764747,0.000021791813,0.00004407883,0.0004824654,0.0003001682,0.00031467344,0.00006776485,0.00038238906,0.9220106,0.026280891,0.0041450523,0.04593635],"study_design_scores_gemma":[0.00043913026,0.00035247995,0.000034700875,0.00037186415,0.00015321224,0.00006047063,0.0000015570238,0.0003320985,0.051198725,0.00048696037,0.94623816,0.00033066113],"about_ca_topic_score_codex":0.000006233284,"about_ca_topic_score_gemma":4.257889e-7,"teacher_disagreement_score":0.9420931,"about_ca_system_score_codex":0.00018097837,"about_ca_system_score_gemma":0.0001331702,"threshold_uncertainty_score":0.9998841},"labels":[],"label_agreement":null},{"id":"W2320119543","doi":"10.1007/978-1-4939-3299-3_4","title":"Measurement of PTEN by Flow Cytometry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"","keywords":"Flow cytometry; PTEN; Intracellular; Cytometry; Cell biology; Cell; Biology; Computational biology; Chemistry; Molecular biology; Signal transduction; PI3K/AKT/mTOR pathway; Biochemistry","score_opus":0.04576277108878848,"score_gpt":0.4001581320842152,"score_spread":0.35439536099542673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2320119543","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037894048,0.010912845,0.94909257,0.000103991115,0.0004465,0.00018661428,0.000025802332,0.000013205599,0.0013244562],"genre_scores_gemma":[0.306831,0.00008043484,0.69223684,0.00049189775,0.000105082974,0.000061436,0.000069387446,0.000046262263,0.00007766839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974526,0.0010512492,0.00041609665,0.00050830987,0.00020936792,0.00036233725],"domain_scores_gemma":[0.9988836,0.000024990033,0.00014728746,0.0005657835,0.0002556538,0.00012267158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028881254,0.00021586334,0.00035543714,0.00013663166,0.000015698733,0.0000060506627,0.00041239313,0.0003676895,0.000016552447],"category_scores_gemma":[0.0012248941,0.00021024574,0.00011799322,0.00027791449,0.00018160303,0.0000019595989,0.0001981141,0.00016133225,0.000004124508],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008724829,0.00006926831,0.0025931871,0.000014747287,0.00007853218,0.0000042179995,0.000022906477,0.00017198229,0.98158944,0.000069509544,0.0013327057,0.013966277],"study_design_scores_gemma":[0.00083757326,0.00044751726,0.00006267796,0.000016947388,0.000018451203,0.000008843019,0.000026481668,0.00018596493,0.96384484,0.0009282221,0.033394076,0.00022841129],"about_ca_topic_score_codex":0.000046881672,"about_ca_topic_score_gemma":0.000008073899,"teacher_disagreement_score":0.26893693,"about_ca_system_score_codex":0.00008174756,"about_ca_system_score_gemma":0.00018198714,"threshold_uncertainty_score":0.8573572},"labels":[],"label_agreement":null},{"id":"W2321561517","doi":"10.1007/978-1-61779-498-8_3","title":"Mapping of the Wnt/β-Catenin/TCF Response Elements in the Human Versican Promoter","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Versican; Wnt signaling pathway; Cell biology; Transcription factor; Beta-catenin; Biology; Proteoglycan; LRP5; Signal transduction; Gene; Genetics; Extracellular matrix","score_opus":0.046078817337479254,"score_gpt":0.36618545590855467,"score_spread":0.3201066385710754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2321561517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97371036,0.00031497475,0.02407571,0.0002029316,0.00018710029,0.000377488,0.0000037753607,0.0000050060066,0.0011226282],"genre_scores_gemma":[0.8952126,0.000016862554,0.10391054,0.00055028807,0.000028753882,0.00008968433,0.000015992959,0.00001956591,0.00015569216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996285,0.002447706,0.00044102297,0.00038336153,0.00010432658,0.00033857187],"domain_scores_gemma":[0.9992553,0.000051213894,0.00017284881,0.0004476501,0.00004878661,0.0000241902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032665252,0.00018356249,0.00021586915,0.00012064646,0.00006181025,0.000006192421,0.00083104987,0.00021383488,0.000042899148],"category_scores_gemma":[0.00026219193,0.0001209943,0.000118922595,0.00034870836,0.00027209453,0.0000024853775,0.00028203844,0.0002124622,0.0000016567824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014984996,0.00006383639,0.026656233,0.000008620916,0.00004098548,0.0000061318274,0.0009977643,0.0000028390057,0.97030246,0.00029088868,0.00007995257,0.0014004533],"study_design_scores_gemma":[0.0006279775,0.0001905907,0.029384777,0.000027230155,0.000010551362,0.0000071829104,0.00032109904,0.00000520968,0.9617933,0.0025031841,0.004946396,0.00018251632],"about_ca_topic_score_codex":0.00006452314,"about_ca_topic_score_gemma":0.000030283301,"teacher_disagreement_score":0.079834834,"about_ca_system_score_codex":0.00002678737,"about_ca_system_score_gemma":0.00008001718,"threshold_uncertainty_score":0.49340045},"labels":[],"label_agreement":null},{"id":"W2336493368","doi":"10.1007/978-1-4939-3115-6_14","title":"Analysis of Protein–Lipid Interactions Using Purified C2 Domains","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biochemistry; Identification (biology); Chemistry; Biology; C2 domain; Protein–protein interaction; Membrane; Computational biology; Cell biology; Biophysics; Botany","score_opus":0.05265762216701113,"score_gpt":0.40920621687457137,"score_spread":0.35654859470756023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2336493368","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34735566,0.00038980416,0.6512784,0.000035061417,0.00013413683,0.00020510732,0.000010603937,0.00000652388,0.0005847372],"genre_scores_gemma":[0.33283657,0.000011088813,0.6667984,0.0000951549,0.00004843633,0.000054776556,0.000047958638,0.000020139436,0.000087438675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972598,0.0015021629,0.00042941608,0.00044227875,0.000087076274,0.0002792892],"domain_scores_gemma":[0.99898297,0.000040592364,0.00019495779,0.00056516763,0.00012107413,0.000095213094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014928585,0.00018574795,0.00044313312,0.0004068928,0.00002868768,0.000008857845,0.0002844422,0.00025943635,0.000032293832],"category_scores_gemma":[0.0007019901,0.00017719764,0.00024094644,0.00064368825,0.00011635495,0.0000033407043,0.0001600246,0.000115234245,0.0000019213458],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000880557,0.00006288863,0.0011205367,0.000006330659,0.00042123103,0.000004634336,0.000057292247,0.0005955642,0.99073696,0.0011486361,0.0000033791825,0.0057544936],"study_design_scores_gemma":[0.00033941216,0.00019287062,0.00010723841,0.0000101748865,0.00020070307,0.0000074270647,0.000083253406,0.00071357697,0.9918043,0.0021626477,0.0041830423,0.00019537998],"about_ca_topic_score_codex":0.00013016594,"about_ca_topic_score_gemma":0.000047395406,"teacher_disagreement_score":0.015520086,"about_ca_system_score_codex":0.000029036477,"about_ca_system_score_gemma":0.00009128181,"threshold_uncertainty_score":0.722591},"labels":[],"label_agreement":null},{"id":"W2336960687","doi":"10.1007/978-1-4939-3191-0_9","title":"Comet Assay in Cancer Chemoprevention","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carcinogens and Genotoxicity Assessment","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; McMaster University","funders":"","keywords":"Comet assay; DNA damage; Toxicology; DNA; Chemistry; Biomonitoring; Carcinogen; Cancer cell; Comet; Cancer; Biology; Environmental chemistry; Biochemistry; Genetics; Astrobiology","score_opus":0.04570285940728933,"score_gpt":0.45139985056292437,"score_spread":0.405696991155635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2336960687","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41561523,0.002298439,0.5800546,0.0002966983,0.00037077357,0.0002432979,0.000011039146,0.000007183279,0.0011027622],"genre_scores_gemma":[0.5245469,0.00020634156,0.47351858,0.00086787314,0.00014451264,0.00019736335,0.00013963638,0.000033219316,0.00034555237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978094,0.0010839638,0.00028894184,0.0004279059,0.00007341672,0.00031636655],"domain_scores_gemma":[0.99944377,0.000022683786,0.00007137967,0.00032369082,0.000057165103,0.00008131061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020753916,0.00015880638,0.00025158044,0.00014759792,0.000013714896,0.000008865524,0.00019460969,0.00027254818,0.000024669036],"category_scores_gemma":[0.00026918686,0.00015966516,0.00008749565,0.00025561568,0.000070236674,0.0000019173483,0.00017725129,0.00015487026,0.0000029453913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042488784,0.00009130992,0.028024064,0.000007184003,0.000021255413,0.000011584478,0.000032016666,0.00030957314,0.9560141,0.00035144688,0.000127455,0.0149675505],"study_design_scores_gemma":[0.0014161468,0.00029689458,0.0068568876,0.0000150323385,0.000012426448,0.000014157995,0.00009006424,0.00037934084,0.96109,0.0039433925,0.025570929,0.00031467687],"about_ca_topic_score_codex":0.00029960708,"about_ca_topic_score_gemma":0.0004484717,"teacher_disagreement_score":0.1089317,"about_ca_system_score_codex":0.00008034514,"about_ca_system_score_gemma":0.00012000399,"threshold_uncertainty_score":0.6510956},"labels":[],"label_agreement":null},{"id":"W2337238525","doi":"10.1007/7651_2016_334","title":"Use of Stirred Suspension Bioreactors for Male Germ Cell Enrichment","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health","keywords":"Somatic cell; Stem cell; Cell biology; Germ; Progenitor cell; Germ cell; Bioreactor; Biology; Cell culture; Biochemistry; Genetics; Botany; Gene","score_opus":0.05395909418739562,"score_gpt":0.3843988932844916,"score_spread":0.330439799097096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2337238525","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3900376,0.00014613001,0.6088853,0.0002261013,0.00023070142,0.00034871127,0.0000066586886,0.000013201483,0.00010561233],"genre_scores_gemma":[0.26528704,0.00004268242,0.73395765,0.00017741734,0.00003073263,0.000035987112,0.000020021118,0.000018078983,0.0004303598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988679,0.00031758545,0.00027755703,0.0002723976,0.00005858469,0.0002059686],"domain_scores_gemma":[0.99877906,0.0006758083,0.00010784017,0.00028954603,0.000091470254,0.000056255754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005774993,0.00011888018,0.0003075554,0.00017061595,0.000011743345,0.0000021178716,0.000047229696,0.00016771209,0.000085229054],"category_scores_gemma":[0.001430314,0.00007467859,0.00011568957,0.00012975458,0.0000863586,0.000018520852,0.000037363785,0.00005684913,0.0000036847293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001610656,0.00011123612,0.034585144,0.000027990925,0.000020589723,0.000016921495,0.00001420533,0.0000010593377,0.9347589,0.00053968193,0.000082526385,0.029680701],"study_design_scores_gemma":[0.0015727343,0.0007261278,0.014471119,0.000047523954,0.00007718647,0.000030765008,0.000009955942,0.00008715206,0.970395,0.0010929614,0.011379891,0.000109566994],"about_ca_topic_score_codex":0.000045203637,"about_ca_topic_score_gemma":0.000002418774,"teacher_disagreement_score":0.12507239,"about_ca_system_score_codex":0.000051734693,"about_ca_system_score_gemma":0.000040364357,"threshold_uncertainty_score":0.30453044},"labels":[],"label_agreement":null},{"id":"W2339341826","doi":"10.1007/978-1-4939-3387-7_49","title":"Practical Approaches to Forced Degradation Studies of Vaccines","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein purification and stability","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Forced degradation; Degradation (telecommunications); Stress (linguistics); Computer science; Biochemical engineering; Reliability engineering; Engineering; Mathematics; Statistics; Telecommunications","score_opus":0.20983502900770923,"score_gpt":0.4674554328271191,"score_spread":0.25762040381940987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339341826","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11620292,0.0007349022,0.8800989,0.0024299657,0.00007207948,0.00028251205,0.0000058502687,0.000006735264,0.00016617871],"genre_scores_gemma":[0.28526747,0.00008805459,0.71424496,0.00015170906,0.000021504487,0.00010233623,0.000010159636,0.000009236387,0.00010455834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813443,0.0009382417,0.0003169437,0.00038326866,0.000047397996,0.00017973027],"domain_scores_gemma":[0.99922276,0.00013878175,0.00009423078,0.00041145718,0.000086527056,0.000046231373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013285818,0.00011689511,0.00022471888,0.00007850493,0.000018618473,0.0000023731532,0.00014096248,0.00015612021,0.000008828469],"category_scores_gemma":[0.0039009587,0.000079619625,0.00006419277,0.00013737187,0.00011407264,0.0000026958157,0.00012970905,0.000045669985,0.000002182462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088209694,0.00004407609,0.0024117897,0.000012780026,0.000037753805,5.419543e-7,0.000025858919,0.0000028490495,0.9434143,0.011414581,0.000025781655,0.042521536],"study_design_scores_gemma":[0.00034552946,0.00024335503,0.001117165,0.000008727337,0.000008150283,0.0000041582484,0.00006730122,0.000011257008,0.9867648,0.0060515967,0.0052626953,0.00011524985],"about_ca_topic_score_codex":0.0000041702483,"about_ca_topic_score_gemma":0.000011454793,"teacher_disagreement_score":0.16906455,"about_ca_system_score_codex":0.000017830587,"about_ca_system_score_gemma":0.000045524124,"threshold_uncertainty_score":0.46700937},"labels":[],"label_agreement":null},{"id":"W2339432134","doi":"10.1007/978-1-60761-938-3_7","title":"Detection of Multiple Proteins in Intracerebral Vessels by Confocal Microscopy","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Confocal microscopy; Confocal; Chemistry; Cell biology; Blood–brain barrier; Context (archaeology); Fluorescence microscope; Blood proteins; Biophysics; Fluorescence; Biology; Biochemistry; Neuroscience; Central nervous system","score_opus":0.018328826274622474,"score_gpt":0.3642972182309626,"score_spread":0.34596839195634016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2339432134","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46988606,0.000064545784,0.52902794,0.000070248665,0.0004638252,0.00020723663,0.0000071800077,0.00001403522,0.00025890904],"genre_scores_gemma":[0.842032,0.0000066008897,0.1575683,0.00029887437,0.000017939208,0.000051703955,0.0000011937784,0.000009487464,0.000013908006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983833,0.0007093753,0.00028669683,0.0003509244,0.0000435921,0.00022612054],"domain_scores_gemma":[0.99938333,0.00026989274,0.00009113708,0.00020066982,0.000024821193,0.000030157502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004836253,0.000120968536,0.00025392836,0.00013849436,0.000035629688,0.000006860418,0.00014931842,0.00021561871,0.000020528356],"category_scores_gemma":[0.0018411826,0.00010780858,0.000040980878,0.00028944423,0.0003353369,0.00003203197,0.00007268862,0.00044279755,0.0000019050434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050513336,0.000029003546,0.0030450923,0.000008402462,0.0000027811918,0.0000031150043,0.00011602886,0.000001871042,0.9835614,0.001125605,0.000004490478,0.012051723],"study_design_scores_gemma":[0.0005018763,0.00011456413,0.00080199307,0.0000030873111,0.0000026078267,0.000009917107,0.000024781517,0.00018422768,0.9895969,0.0050503504,0.0036101735,0.00009949276],"about_ca_topic_score_codex":0.000095243566,"about_ca_topic_score_gemma":0.00010361805,"teacher_disagreement_score":0.37214592,"about_ca_system_score_codex":0.000012066701,"about_ca_system_score_gemma":0.000019261457,"threshold_uncertainty_score":0.43963063},"labels":[],"label_agreement":null},{"id":"W2340014488","doi":"10.1007/7651_2015_262","title":"Adjusting for Cell Type Composition in DNA Methylation Data Using a Regression-Based Approach","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"","keywords":"DNA methylation; Methylation; Illumina Methylation Assay; Biology; Epigenetics; Bisulfite sequencing; DNA; Differentially methylated regions; Context (archaeology); Genetics; Computational biology; Gene; Gene expression","score_opus":0.14981750148997494,"score_gpt":0.45537553263857,"score_spread":0.30555803114859503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2340014488","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2274664,0.002202878,0.7695769,0.000026377238,0.0001619064,0.0003338222,0.000015113509,0.0000064778646,0.00021012372],"genre_scores_gemma":[0.25344416,0.00001824975,0.7449557,0.000073063566,0.00006435626,0.000021721271,0.0013918441,0.000023781795,0.0000071223303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752545,0.0011592999,0.0003709129,0.0005960147,0.00007506588,0.0002732504],"domain_scores_gemma":[0.99894947,0.000102055754,0.00016419991,0.0005847373,0.0001335476,0.00006601639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027448384,0.0001730724,0.00024381968,0.00017807275,0.0000356695,0.000013566797,0.00029545778,0.0003383294,0.0000012332276],"category_scores_gemma":[0.000786614,0.00016875277,0.00004519167,0.00028169266,0.000054845823,0.000005302195,0.00017861172,0.00012242429,3.9021694e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013739955,0.00009069474,0.002769021,0.000028247352,0.00000710357,0.0000013670592,0.000028328535,0.01275196,0.9780138,0.000055545614,0.000007861759,0.006108673],"study_design_scores_gemma":[0.0012336206,0.00023619055,0.00013996664,0.000018151975,0.000020171197,0.000001206466,0.000047090758,0.17252658,0.82315373,0.00137878,0.0010363457,0.00020816528],"about_ca_topic_score_codex":0.00004336997,"about_ca_topic_score_gemma":0.000010523413,"teacher_disagreement_score":0.15977463,"about_ca_system_score_codex":0.000046077585,"about_ca_system_score_gemma":0.00016527278,"threshold_uncertainty_score":0.6881538},"labels":[],"label_agreement":null},{"id":"W2341353219","doi":"10.1007/978-1-4939-3387-7_23","title":"Using MHC Molecules to Define a Chlamydia T Cell Vaccine","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Centre for Disease Control; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health","keywords":"Chlamydia; Major histocompatibility complex; Virology; Biology; Computational biology; Immunology; Immune system","score_opus":0.04970412598421418,"score_gpt":0.43931823843581724,"score_spread":0.38961411245160305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341353219","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2829359,0.0013754106,0.71280766,0.00054501946,0.00048878783,0.0003524723,0.000009032369,0.000045904762,0.0014398443],"genre_scores_gemma":[0.19642267,0.00008709759,0.80139,0.000383238,0.000053775446,0.00013332581,0.000015409194,0.000060894985,0.0014536023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954859,0.0026391177,0.0004004939,0.0007608458,0.000029327333,0.0006842868],"domain_scores_gemma":[0.9984983,0.0005175805,0.00008209449,0.0007182997,0.00013713753,0.000046585224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001686057,0.00024337671,0.00042531829,0.00062834425,0.00008183886,0.000007769708,0.00035605364,0.0004016139,0.00055215624],"category_scores_gemma":[0.001766531,0.00017475967,0.00011152278,0.0006007344,0.00016591366,0.000039943614,0.00029425553,0.00036233073,0.00046042734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010270731,0.000132654,0.006832193,0.000006957497,0.000055243083,0.000017056984,0.000038237944,0.000036055506,0.96121275,0.0021346216,0.00007903867,0.029352501],"study_design_scores_gemma":[0.0010309416,0.00025408537,0.0030616857,0.000019713952,0.000016005763,0.000094748764,0.000014948664,0.0000047272033,0.97471195,0.003645499,0.01690563,0.00024007195],"about_ca_topic_score_codex":0.0001730913,"about_ca_topic_score_gemma":0.000016395708,"teacher_disagreement_score":0.08858234,"about_ca_system_score_codex":0.000137483,"about_ca_system_score_gemma":0.00008468747,"threshold_uncertainty_score":0.7126492},"labels":[],"label_agreement":null},{"id":"W2341911729","doi":"10.1007/978-1-62703-845-4_17","title":"Expression of Genetically Encoded Fluorescent Probes to Monitor Phospholipid Dynamics in Live Neutrophils","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Phospholipid; Fluorescent protein; Transfection; Green fluorescent protein; Cell biology; Biology; Chemotaxis; Phospholipid scramblase; Chemistry; Biochemistry; Gene; Receptor; Membrane","score_opus":0.01936024520411994,"score_gpt":0.39351682834333934,"score_spread":0.3741565831392194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2341911729","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5528113,0.00023606242,0.4453645,0.00039626824,0.00009559671,0.0006854392,0.0000029762273,0.000013467759,0.00039434736],"genre_scores_gemma":[0.26523373,0.000068104004,0.7342072,0.00028078893,0.00003404957,0.000090256086,0.00001450667,0.000031323314,0.000040051786],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963776,0.001771601,0.00058184663,0.0005529249,0.00022001487,0.0004959982],"domain_scores_gemma":[0.99863833,0.00032149587,0.00008061485,0.0006078485,0.0001422077,0.00020950325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013991412,0.00020741759,0.00060712016,0.00048505203,0.000016170716,0.000005924056,0.000303898,0.00029364345,0.000059507973],"category_scores_gemma":[0.0018878698,0.00017781659,0.0001058772,0.00047250514,0.00016483579,0.000009711099,0.0003501194,0.00041555747,0.000016043568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034293561,0.00024683514,0.009429804,0.000080192156,0.000008177154,0.00004634758,0.00011323189,0.00013032158,0.9477591,0.000860584,0.000008452908,0.040974032],"study_design_scores_gemma":[0.001111043,0.0009053232,0.007016501,0.00015583652,0.000011099049,0.000010126862,0.00006510981,0.007497541,0.9812951,0.001548645,0.00022672345,0.00015694294],"about_ca_topic_score_codex":0.00012417385,"about_ca_topic_score_gemma":0.000021251535,"teacher_disagreement_score":0.2888427,"about_ca_system_score_codex":0.00020999233,"about_ca_system_score_gemma":0.00006845773,"threshold_uncertainty_score":0.725115},"labels":[],"label_agreement":null},{"id":"W2342213260","doi":"10.1007/978-1-60327-287-2_13","title":"Protocols for Establishment of an In Vitro Collection of Medicinal Plants in the Genus Scutellaria","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Flavonoids in Medical Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Scutellaria; Medicinal plants; Identification (biology); Plant species; Traditional medicine; Biology; Botany; Medicine; Traditional Chinese medicine; Alternative medicine","score_opus":0.06652768345209376,"score_gpt":0.5105636994609717,"score_spread":0.44403601600887793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2342213260","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5593587,0.00030436888,0.41639706,0.0016057311,0.00010132338,0.021315923,0.000012619562,0.000009113354,0.000895127],"genre_scores_gemma":[0.13998985,0.000025901356,0.8563363,0.00066020456,0.00004296501,0.0028849442,0.000034884742,0.000012089899,0.0000128657775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99647343,0.0020700425,0.0005857526,0.0002744325,0.00026676152,0.0003295849],"domain_scores_gemma":[0.9986466,0.000772879,0.000103674836,0.00034651652,0.00007106086,0.00005926617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008249714,0.000109621564,0.0005075665,0.00047304295,0.0000128299125,0.000002595032,0.00027643665,0.00024560234,0.000013595415],"category_scores_gemma":[0.004914424,0.000076514596,0.000054522145,0.0006160024,0.0002024921,0.00001596692,0.00003118098,0.0004154317,1.5378949e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018137591,0.00046181,0.0012564935,0.000089925576,0.0000098792025,0.000056327586,0.0004101606,0.000010709632,0.87020934,0.00045402572,0.000022827853,0.12520473],"study_design_scores_gemma":[0.004368214,0.0041791312,0.008166217,0.00019817516,0.000013433195,0.00002453578,0.00027372263,0.0029978734,0.969368,0.009695072,0.00062971393,0.000085930114],"about_ca_topic_score_codex":0.0001376527,"about_ca_topic_score_gemma":0.000028063576,"teacher_disagreement_score":0.43993923,"about_ca_system_score_codex":0.000096732525,"about_ca_system_score_gemma":0.00022617137,"threshold_uncertainty_score":0.58833796},"labels":[],"label_agreement":null},{"id":"W2343167829","doi":"10.1007/978-1-4939-3299-3_2","title":"PTEN at 18: Still Growing","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Princess Margaret Cancer Centre","funders":"Canadian Institutes of Health Research","keywords":"PTEN; Cancer research; Medicine; Biology; PI3K/AKT/mTOR pathway; Genetics; Apoptosis","score_opus":0.053048332717137686,"score_gpt":0.42101696851702985,"score_spread":0.36796863579989214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2343167829","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26292682,0.0056078876,0.72474444,0.00026860498,0.0010450192,0.00025369282,0.000016819653,0.00004088169,0.005095818],"genre_scores_gemma":[0.1707355,0.00007118085,0.82482713,0.0026040617,0.00037509666,0.0001123744,0.00016260006,0.000092904374,0.001019184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971311,0.0011442585,0.00036629144,0.0007111004,0.000117546166,0.0005296702],"domain_scores_gemma":[0.9988902,0.000061553954,0.00011266425,0.00065236614,0.00010855379,0.00017465807],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017054395,0.00027015738,0.00033479955,0.000121794095,0.000035169007,0.000012777949,0.00045541782,0.0004572177,0.00006256542],"category_scores_gemma":[0.0009932143,0.00026693044,0.00013808663,0.00020934273,0.0001993154,0.000004083039,0.00048628295,0.0002082951,0.00002564267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106940766,0.00002937888,0.0035315433,0.0000076944025,0.000052102594,0.000029543566,0.000051345392,0.00034717654,0.98670274,0.0004084515,0.00083314587,0.00789991],"study_design_scores_gemma":[0.00089981634,0.00031184952,0.000099287645,0.000011530109,0.00001823966,0.000037613077,0.000036192578,0.00017499531,0.82969236,0.0028136447,0.16556181,0.00034268416],"about_ca_topic_score_codex":0.000043623775,"about_ca_topic_score_gemma":0.00001880951,"teacher_disagreement_score":0.16472867,"about_ca_system_score_codex":0.0001238093,"about_ca_system_score_gemma":0.0001319572,"threshold_uncertainty_score":0.9999783},"labels":[],"label_agreement":null},{"id":"W23439009","doi":"10.1007/978-1-4939-2425-7_31","title":"Mapping Biochemical Networks with Protein Fragment Complementation Assays","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Complementation; Dihydrofolate reductase; Protein-fragment complementation assay; Enzyme; Computational biology; Protein–protein interaction; Fragment (logic); Bimolecular fluorescence complementation; Biology; Biochemistry; In vitro; Macromolecule; Chemistry; Cell biology; Gene; Computer science","score_opus":0.030299740389648923,"score_gpt":0.3694434834419039,"score_spread":0.339143743052255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W23439009","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1058652,0.00236485,0.8897444,0.00029939043,0.00012661643,0.00036790877,0.0000029814455,0.000016748094,0.0012119028],"genre_scores_gemma":[0.1617741,0.00006238994,0.8372275,0.00045035852,0.00009290374,0.00010270295,0.00016223938,0.000026930311,0.00010083806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818105,0.0006738751,0.00027270708,0.00044465778,0.00007940925,0.0003483018],"domain_scores_gemma":[0.9994567,0.000017178356,0.00009447046,0.00026188488,0.000081905775,0.00008782934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009022757,0.00019981114,0.00023102367,0.00007833202,0.000043624732,0.000010579035,0.00016911663,0.0003258508,0.000006410152],"category_scores_gemma":[0.00012798017,0.00015876075,0.000054134343,0.00020957639,0.00018452454,0.0000015175793,0.00018368357,0.00022066163,0.0000023340515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008784787,0.000058469468,0.002455321,0.000008844504,0.00010568731,0.0000110733645,0.00007269659,0.00035204535,0.99293375,0.00046719084,0.00030551406,0.0031415445],"study_design_scores_gemma":[0.0020529756,0.00082145946,0.00039265846,0.000046942787,0.000019874466,0.000031394557,0.00054258696,0.000848575,0.97647727,0.001061193,0.017260391,0.0004447002],"about_ca_topic_score_codex":0.00002379179,"about_ca_topic_score_gemma":0.000008896085,"teacher_disagreement_score":0.05590889,"about_ca_system_score_codex":0.000034312994,"about_ca_system_score_gemma":0.000048113296,"threshold_uncertainty_score":0.64740753},"labels":[],"label_agreement":null},{"id":"W2344092557","doi":"10.1007/978-1-62703-727-3_30","title":"The Clinical Use of PET/CT in the Evaluation of Melanoma","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Medical Imaging Techniques and Applications","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Positron emission tomography; Melanoma; Medicine; PET-CT; Nuclear medicine; Modality (human–computer interaction); Radiology; Pet imaging; Stage (stratigraphy); Computed tomography; Clinical Practice; Medical physics; Computer science; Artificial intelligence; Cancer research","score_opus":0.43571130178684186,"score_gpt":0.6455633355713518,"score_spread":0.20985203378450995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2344092557","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019699168,0.91089386,0.08531633,0.0006888047,0.00008570294,0.0025474876,0.0000062448294,0.00000828972,0.0002562607],"genre_scores_gemma":[0.000013873971,0.59790546,0.40143964,0.00010591837,0.000017078375,0.00046747932,0.000029061748,0.0000099344325,0.000011555007],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98865986,0.009488612,0.0012352025,0.00026264373,0.00019671275,0.00015699826],"domain_scores_gemma":[0.9946366,0.0038293125,0.00048001565,0.00088783365,0.00013558271,0.00003068568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.016322242,0.00014995718,0.0011355003,0.0001186173,0.000014539213,0.00000436793,0.00038785342,0.0000929128,0.000028310602],"category_scores_gemma":[0.0071627474,0.000069980146,0.00032173467,0.00036115927,0.00044396135,0.0000066654575,0.000096781856,0.0006323012,0.0000021771561],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000021231085,0.00007965059,0.000078146746,0.00040649576,0.000041042404,0.000008750441,0.0000047706108,8.665071e-8,0.00012540256,0.0033620787,0.00023717228,0.9956543],"study_design_scores_gemma":[0.00024314728,0.00013289147,0.00006723281,0.0014513177,0.00071023364,0.00015804896,0.0000097458405,0.00041952188,0.00011542372,0.0054666265,0.9911435,0.0000823075],"about_ca_topic_score_codex":0.0000815779,"about_ca_topic_score_gemma":0.0000037244797,"teacher_disagreement_score":0.995572,"about_ca_system_score_codex":0.000031669297,"about_ca_system_score_gemma":0.00027005377,"threshold_uncertainty_score":0.8574995},"labels":[],"label_agreement":null},{"id":"W2344455108","doi":"10.1007/978-1-59745-281-6_1","title":"Two-Dimensional Electrophoresis: An Overview","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Isoelectric point; Proteome; Chemistry; Isoelectric focusing; Electrophoresis; Two-dimensional gel electrophoresis; Gel electrophoresis; Chromatography; Molecular mass; Fractionation; Gel electrophoresis of nucleic acids; Mass spectrometry; Gel electrophoresis of proteins; Immobilized pH gradient; Proteomics; Biochemistry; Polyacrylamide gel electrophoresis; Enzyme","score_opus":0.03169583531837501,"score_gpt":0.44052630405811083,"score_spread":0.40883046873973583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2344455108","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046495676,0.0034098914,0.94641507,0.00034499128,0.000013563944,0.0001183355,0.0000059661224,0.00011863128,0.0030778905],"genre_scores_gemma":[0.010537379,0.00013439413,0.988163,0.0009751499,0.000029277546,0.00007183691,0.00003573337,0.000013053052,0.000040195824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900186,0.00015883979,0.0002119271,0.0003406202,0.00003888804,0.0002478695],"domain_scores_gemma":[0.9994044,0.00004452722,0.000061273204,0.00041280568,0.000025694822,0.000051311166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031235567,0.00012758888,0.00019104616,0.000051122828,0.00003633709,0.0000058238124,0.00022711669,0.0001441911,0.00013324847],"category_scores_gemma":[0.000055980247,0.00012373565,0.00005762575,0.00014788353,0.000043282922,0.00001897642,0.000039279847,0.00023397058,0.000003074127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010517597,0.00004928363,0.000038784994,0.0000027815477,0.0000034714178,0.0000053631625,0.000004086275,0.00006246014,0.88522816,0.07711468,0.0000053420695,0.037475053],"study_design_scores_gemma":[0.00013038715,0.000044459684,0.000017759643,0.000006762038,0.0000041382095,0.000010327453,0.0000017099569,0.00032944485,0.67541164,0.32213587,0.0017996514,0.000107830216],"about_ca_topic_score_codex":0.000014853885,"about_ca_topic_score_gemma":0.0000018292376,"teacher_disagreement_score":0.24502118,"about_ca_system_score_codex":0.000041021533,"about_ca_system_score_gemma":0.000023107907,"threshold_uncertainty_score":0.5045793},"labels":[],"label_agreement":null},{"id":"W2345025608","doi":"10.1007/978-1-4939-1661-0_10","title":"Laser Capture Microdissection for Gene Expression Analysis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Laser capture microdissection; RNA; Molecular biology; Biology; Population; Microdissection; Gene expression; Genotyping; Complementary DNA; Gene; DNA; Computational biology; Genetics; Genotype","score_opus":0.010935108826839247,"score_gpt":0.3815358836944237,"score_spread":0.37060077486758447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2345025608","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.056838695,0.0003085174,0.9417993,0.00013450872,0.00008209648,0.00038889918,0.00002564189,0.000028052562,0.00039429875],"genre_scores_gemma":[0.12816203,0.00003917886,0.86956817,0.0007099302,0.000095515126,0.00042954335,0.00079035264,0.000028108316,0.00017719805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99795413,0.0006732647,0.00030663866,0.00070249557,0.000037806654,0.00032569157],"domain_scores_gemma":[0.9990508,0.00004941357,0.00011950077,0.0006338803,0.00008134715,0.00006505583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009624445,0.0002133401,0.00031186044,0.00020737082,0.00007593728,0.000010780783,0.00027876353,0.000522291,0.000013355278],"category_scores_gemma":[0.00022711491,0.00019812176,0.0002857714,0.00035367993,0.000103413775,0.0000015288277,0.00011813109,0.00012914337,0.0000014899838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031633903,0.00004642526,0.0017266566,0.000005030921,0.00009418946,5.1549773e-7,0.000007842729,0.00014833164,0.9910613,0.0009001441,0.00016860673,0.005809354],"study_design_scores_gemma":[0.00034747538,0.00017267044,0.00025133492,0.000002797811,0.00009441413,0.0000054299244,0.00000828669,0.0006664296,0.9606961,0.0025541547,0.034970336,0.00023056987],"about_ca_topic_score_codex":0.000024844652,"about_ca_topic_score_gemma":0.00003032194,"teacher_disagreement_score":0.07223115,"about_ca_system_score_codex":0.000015076282,"about_ca_system_score_gemma":0.000020076935,"threshold_uncertainty_score":0.8079171},"labels":[],"label_agreement":null},{"id":"W2345484179","doi":"10.1007/978-1-61779-276-2_12","title":"Visualizing Gene-Set Enrichment Results Using the Cytoscape Plug-in Enrichment Map","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":80,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Occupational Cancer Research Centre","funders":"National Institute of General Medical Sciences","keywords":"Redundancy (engineering); Set (abstract data type); Gene; Computer science; Gene regulatory network; Data mining; Computational biology; Interpretation (philosophy); Biology; Genetics; Gene expression","score_opus":0.049085412500356286,"score_gpt":0.3800818529842282,"score_spread":0.3309964404838719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2345484179","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09191688,0.0027558214,0.9025633,0.00012174992,0.0005444645,0.00047855792,0.000020852172,0.000011599073,0.0015867994],"genre_scores_gemma":[0.2050088,0.00029261777,0.7925859,0.001628312,0.00015079607,0.000069641115,0.00013397618,0.00004221722,0.00008769746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971398,0.0009236932,0.0007240159,0.0005283378,0.00008822632,0.0005959132],"domain_scores_gemma":[0.998896,0.00005383508,0.00022048684,0.0007035194,0.00005147988,0.00007468554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024314797,0.0002874601,0.00031406878,0.00013610302,0.00007488934,0.000017898948,0.0004941262,0.0003836728,0.000014719487],"category_scores_gemma":[0.00013629146,0.00022636043,0.00013202878,0.00022384559,0.0001545909,0.0000036176814,0.0004254772,0.00027030843,0.0000051402694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020531753,0.000093886236,0.001453185,0.000016647038,0.000084696876,0.00002542285,0.0006048802,0.0007229081,0.987016,0.0019084577,0.0001551437,0.007713414],"study_design_scores_gemma":[0.0029828802,0.00074842625,0.0011717408,0.000056270328,0.00006624304,0.00008588384,0.0007240512,0.00766505,0.9432543,0.014015827,0.028186228,0.0010430773],"about_ca_topic_score_codex":0.0001589831,"about_ca_topic_score_gemma":0.000050118517,"teacher_disagreement_score":0.11309193,"about_ca_system_score_codex":0.00006157602,"about_ca_system_score_gemma":0.00007448291,"threshold_uncertainty_score":0.923071},"labels":[],"label_agreement":null},{"id":"W234637121","doi":"10.1007/978-1-62703-339-8_32","title":"Anticardiolipin Antibody and Anti-beta 2 Glycoprotein I Antibody Assays","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; Hamilton Regional Laboratory Medicine Program; St. Joseph's Hospital; McMaster University; Calgary Laboratory Services","funders":"","keywords":"Antibody; Anticardiolipin antibodies; Glycoprotein; Chemistry; Molecular biology; BETA (programming language); Immunology; Medicine; Biology; Computer science","score_opus":0.025952321017850045,"score_gpt":0.4325955566282625,"score_spread":0.40664323561041243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W234637121","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6008522,0.002350678,0.39111257,0.00081883545,0.00016264935,0.0013366131,0.0000031197085,0.00006272019,0.0033006195],"genre_scores_gemma":[0.37598136,0.00049269805,0.6223395,0.00051360606,0.00012616918,0.00014332715,0.000064509775,0.00007663736,0.00026222292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954007,0.0022008074,0.0006028258,0.00077211787,0.00023806795,0.00078543427],"domain_scores_gemma":[0.99825525,0.00037842453,0.00010932683,0.00084313634,0.00017762593,0.00023621709],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002664373,0.00031846896,0.0010825637,0.0005137125,0.00005638333,0.000038291677,0.0002578735,0.0004476504,0.0001682675],"category_scores_gemma":[0.0010239298,0.00025785202,0.00015325799,0.0005615947,0.00042260226,0.00005997426,0.0002890258,0.0005277618,0.000102110746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002017364,0.00005185542,0.27381277,0.00018928568,0.00009141708,0.00013788867,0.00006443651,6.0461474e-7,0.719166,0.0015359416,0.0000430167,0.0048866416],"study_design_scores_gemma":[0.009144451,0.0012682555,0.13717328,0.0012311945,0.00021445604,0.01845359,0.0007382452,0.003155062,0.80753237,0.011396909,0.008280383,0.0014117812],"about_ca_topic_score_codex":0.0002916456,"about_ca_topic_score_gemma":0.000001207344,"teacher_disagreement_score":0.2312269,"about_ca_system_score_codex":0.00006391917,"about_ca_system_score_gemma":0.000106428735,"threshold_uncertainty_score":0.99998736},"labels":[],"label_agreement":null},{"id":"W2346708074","doi":"10.1007/978-1-60327-164-6_9","title":"Enumeration of Bacteriophages Using the Small Drop Plaque Assay System","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":239,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Enumeration; Virus quantification; Drop (telecommunication); Biology; Computational biology; Computer science; Genetics; Mathematics; Combinatorics; Cell culture","score_opus":0.021695469537446097,"score_gpt":0.3560334562563664,"score_spread":0.3343379867189203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2346708074","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32062864,0.0000499519,0.67802566,0.00014181234,0.00016225892,0.00012285885,0.0000031211,0.000009779366,0.00085588574],"genre_scores_gemma":[0.5656088,0.000006303938,0.4341196,0.00019412756,0.000015145635,0.000004377085,0.0000041450644,0.000005566326,0.000041962405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836093,0.0010080818,0.00024711693,0.00019252987,0.000029346562,0.00016198822],"domain_scores_gemma":[0.9995621,0.00008193099,0.000111251524,0.00021623941,0.00000746011,0.000021043612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007677625,0.00009645562,0.00016320364,0.000037340822,0.00005370406,0.000012375512,0.00017601426,0.00010020726,0.00013002442],"category_scores_gemma":[0.000057290847,0.000070916096,0.000060624956,0.00015643056,0.000097319426,0.000036435456,0.000065868364,0.00013245331,0.0000074673158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007176287,0.000020930855,0.0002461932,0.0000030597434,0.0000054178345,0.00000463759,0.000097652555,0.0002503464,0.98303753,0.00043591383,0.0000032768469,0.015887862],"study_design_scores_gemma":[0.00016055365,0.00010285446,0.012427728,0.000025236568,0.000019897107,0.0000654871,0.000093452545,0.00310487,0.9816794,0.00034762122,0.0018441308,0.00012877944],"about_ca_topic_score_codex":0.0004014522,"about_ca_topic_score_gemma":0.000043860095,"teacher_disagreement_score":0.24498013,"about_ca_system_score_codex":0.00009422819,"about_ca_system_score_gemma":0.0000070035435,"threshold_uncertainty_score":0.28918743},"labels":[],"label_agreement":null},{"id":"W23831330","doi":"10.1007/978-1-60761-869-0_5","title":"Phenotypic and Functional Characterization of CD8+ T Regulatory Cells","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Effector; CD8; IL-2 receptor; Cytotoxic T cell; Phenotype; Immunology; Cell biology; Biology; Function (biology); T cell; Immune system; In vitro; Genetics; Gene","score_opus":0.011553130675473314,"score_gpt":0.2770470214498394,"score_spread":0.2654938907743661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W23831330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8581575,0.0005676683,0.1389928,0.00009328044,0.0017152872,0.00014148178,0.00001213217,0.000025164418,0.0002946854],"genre_scores_gemma":[0.90826386,0.00006971688,0.090295464,0.00027382644,0.00003484406,0.000027385366,0.00018545773,0.000023498833,0.0008259417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816895,0.00083629554,0.00035830936,0.00034847314,0.000015214928,0.00027276934],"domain_scores_gemma":[0.9992922,0.00016833744,0.00015671027,0.00031285433,0.0000542848,0.000015647867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069478626,0.0001634573,0.00034656256,0.00020414066,0.000053792748,0.0000031759992,0.00014066765,0.0006018173,0.0004687502],"category_scores_gemma":[0.00009999623,0.0001499584,0.00006049288,0.00013878231,0.0006193813,0.00002776685,0.00012138478,0.0004714183,0.000029908757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000751191,0.0000802029,0.0018857833,0.0000118438,0.000053687738,0.000001961174,0.000061582585,6.8358827e-7,0.97399336,0.011065319,0.000010562913,0.012759881],"study_design_scores_gemma":[0.00074115366,0.00011183221,0.0070656897,0.00000505864,0.000019358451,0.000038039107,0.00001478644,0.000006017321,0.979482,0.0028442838,0.009530427,0.00014134322],"about_ca_topic_score_codex":0.000024492516,"about_ca_topic_score_gemma":0.000007970819,"teacher_disagreement_score":0.050106358,"about_ca_system_score_codex":0.000008803793,"about_ca_system_score_gemma":0.0000404102,"threshold_uncertainty_score":0.6115126},"labels":[],"label_agreement":null},{"id":"W2394518060","doi":"10.1007/978-1-60761-421-0_4","title":"Isolation of Immature Primary Langerhans Cells from Human Epidermal Skin","year":2006,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Epidermis (zoology); Langerin; Langerhans cell; Biology; Population; Cell biology; Immune system; Antigen; Immunology; Dendritic cell; Anatomy; Medicine","score_opus":0.010005966994884671,"score_gpt":0.31948153588997524,"score_spread":0.3094755688950906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394518060","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46843556,0.017115293,0.5119834,0.000104438834,0.0005477406,0.00021814457,0.000049251386,0.00003688726,0.0015093216],"genre_scores_gemma":[0.35279632,0.00013079059,0.64363897,0.00056814327,0.0000674357,0.00004641012,0.0012106857,0.000055826353,0.0014854289],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961054,0.002747832,0.00052023504,0.00029845274,0.000016292013,0.0003117992],"domain_scores_gemma":[0.9989369,0.0004532598,0.00020931405,0.0003589658,0.000035296664,0.0000062449826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007517565,0.00019191565,0.00047105082,0.00020293414,0.00006112264,0.0000043932455,0.00025037985,0.0005683102,0.00033316738],"category_scores_gemma":[0.00005453062,0.00017551388,0.00014886155,0.00016319686,0.00025075904,0.000025769103,0.00007460246,0.00033112505,0.000021454758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029564172,0.00010839922,0.00074298115,0.000009502076,0.000079912694,0.000005575861,0.0001335655,0.0000137321895,0.98549557,0.0012288048,0.000109744964,0.011776595],"study_design_scores_gemma":[0.0010018107,0.00013451463,0.021953724,0.000015546835,0.000021880725,0.000008668893,0.00003146942,0.00000269636,0.9606087,0.004898457,0.01115098,0.00017153828],"about_ca_topic_score_codex":0.0014069518,"about_ca_topic_score_gemma":0.000038799164,"teacher_disagreement_score":0.1316556,"about_ca_system_score_codex":0.00003294907,"about_ca_system_score_gemma":0.00003347809,"threshold_uncertainty_score":0.7157248},"labels":[],"label_agreement":null},{"id":"W2394620795","doi":"10.1007/978-1-61779-068-3_13","title":"Immuno-Mass Spectrometry: Quantification of Low-Abundance Proteins in Biological Fluids","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University Health Network; University of Toronto","funders":"","keywords":"Mass spectrometry; Analyte; Chemistry; Chromatography; Triple quadrupole mass spectrometer; Selected reaction monitoring; Sample preparation; Biological fluids; Tandem mass spectrometry; Analytical Chemistry (journal)","score_opus":0.04471484809676687,"score_gpt":0.371888233789011,"score_spread":0.32717338569224413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394620795","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1269595,0.00045054586,0.8585323,0.000053539236,0.000025958534,0.0002389992,0.00001317532,0.00006634046,0.013659659],"genre_scores_gemma":[0.40433487,0.000088514455,0.5953038,0.00001617479,0.000009309223,0.00018734155,0.000020718237,0.000011885216,0.000027398273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819326,0.00033473736,0.0005838587,0.00048820235,0.00006355517,0.00033640792],"domain_scores_gemma":[0.9989366,0.000113692746,0.00019052648,0.0006801515,0.00004323109,0.000035793095],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010126774,0.00018368641,0.00040552358,0.00029909727,0.000022180275,0.000004924887,0.0005005299,0.00036091404,0.0012462584],"category_scores_gemma":[0.0003478005,0.00016976791,0.00009887252,0.0008382316,0.00022930637,0.00002142901,0.00009583648,0.0003517461,0.000004524011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028449707,0.0002039436,0.010527084,0.00003355832,0.000010860579,0.000004729487,0.000037593516,8.513993e-7,0.8798159,0.10688879,0.0000012690393,0.002446965],"study_design_scores_gemma":[0.00020258415,0.00009279011,0.002242408,0.000027308375,0.0000037320483,0.0000039302768,0.000031695283,0.00013484164,0.91393733,0.08282049,0.00033790997,0.00016499565],"about_ca_topic_score_codex":0.00017782909,"about_ca_topic_score_gemma":0.0000068782592,"teacher_disagreement_score":0.27737537,"about_ca_system_score_codex":0.000083674095,"about_ca_system_score_gemma":0.000029264233,"threshold_uncertainty_score":0.99966675},"labels":[],"label_agreement":null},{"id":"W2394729791","doi":"10.1007/978-1-61779-980-8_9","title":"Live Imaging for Studying Asymmetric Cell Division in the C. elegans Embryo","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Cell division; Asymmetric cell division; Zygote; Biology; Cell biology; Caenorhabditis elegans; Embryo; Stem cell; Carcinogenesis; Developmental biology; Cell; Cell growth; Genetics; Embryogenesis; Cancer; Gene","score_opus":0.023888010320703867,"score_gpt":0.3622339768823142,"score_spread":0.3383459665616103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394729791","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30305323,0.0050537838,0.69053847,0.00013638793,0.00033740955,0.00048079307,0.000006236576,0.0000076942315,0.00038597416],"genre_scores_gemma":[0.7045056,0.00010404135,0.29413423,0.00091700593,0.0001291633,0.00009416906,0.00004652629,0.000032862456,0.00003635753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968914,0.0014175621,0.0003857685,0.0004914032,0.00010004907,0.00071385404],"domain_scores_gemma":[0.998982,0.00022102293,0.000118955664,0.00055181974,0.00005785696,0.00006830318],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034688208,0.00026017474,0.00028871518,0.00023214243,0.00008920747,0.000026791928,0.00053630763,0.00023050152,0.0000058922024],"category_scores_gemma":[0.0005024171,0.00021397969,0.00014479304,0.00031227147,0.0001053196,0.0000058459955,0.00022744019,0.00025087097,0.000005150436],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002005004,0.00021865229,0.07132067,0.000025730755,0.000017025126,0.0000035844635,0.0012115847,0.00014834905,0.9151486,0.0003250743,0.00007924706,0.011481442],"study_design_scores_gemma":[0.0024320418,0.0006651988,0.04963718,0.000022876548,0.000086130945,0.000035946734,0.002378624,0.0013659865,0.92376643,0.0039400146,0.014727285,0.0009422778],"about_ca_topic_score_codex":0.000068547735,"about_ca_topic_score_gemma":0.00002297302,"teacher_disagreement_score":0.4014524,"about_ca_system_score_codex":0.000029985375,"about_ca_system_score_gemma":0.000037621325,"threshold_uncertainty_score":0.8725838},"labels":[],"label_agreement":null},{"id":"W2394794107","doi":"10.1007/978-1-4939-1568-2_7","title":"Mast Cells in Human Health and Disease","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mast (botany); Disease; Human health; Medicine; Mast cell; Environmental health; Immunology; Pathology","score_opus":0.034859349686369855,"score_gpt":0.41559826699643493,"score_spread":0.3807389173100651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394794107","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008452407,0.9641169,0.034297746,0.000057383713,0.0004481754,0.000594053,0.000052692092,0.000018737574,0.00040586217],"genre_scores_gemma":[0.0000031547122,0.9648521,0.033192907,0.00038342125,0.00002279103,0.00010554228,0.0005659479,0.000047312602,0.0008268388],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99138343,0.0063657053,0.0008859131,0.0007702486,0.000014941787,0.0005797789],"domain_scores_gemma":[0.99871975,0.00030424562,0.00034230505,0.0005136283,0.000012885352,0.00010719975],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017294964,0.0004431417,0.002324119,0.00053107756,0.00006667129,0.00000833518,0.00032353643,0.0007107619,0.00017666486],"category_scores_gemma":[0.0001945847,0.00037806426,0.0002182785,0.00022158556,0.00035620504,0.000008304581,0.0002517652,0.00080622314,0.00004048141],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000128244155,0.00009529661,0.000038557584,0.006009535,0.000062802435,0.000038221613,0.00005290111,3.1091673e-7,0.005247412,0.0071836333,0.00015576929,0.98110276],"study_design_scores_gemma":[0.00043965958,0.00015500483,0.000005125092,0.0013410824,0.00005767589,0.000018411149,0.000006706431,6.234904e-7,0.000075609845,0.0011601546,0.99641424,0.00032568988],"about_ca_topic_score_codex":0.00014523238,"about_ca_topic_score_gemma":0.00005316254,"teacher_disagreement_score":0.9962585,"about_ca_system_score_codex":0.00008280728,"about_ca_system_score_gemma":0.00023164936,"threshold_uncertainty_score":0.99986714},"labels":[],"label_agreement":null},{"id":"W2394818183","doi":"10.1007/978-1-61779-477-3_23","title":"Genomic Approaches for Determining Nucleosome Occupancy in Yeast","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chromatin; Nucleosome; Histone; Genome; Biology; Computational biology; Genetics; ChIA-PET; DNA; Gene; DNA sequencing; Evolutionary biology","score_opus":0.05807819957772342,"score_gpt":0.34109616207961,"score_spread":0.2830179625018866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394818183","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5620181,0.00037660054,0.4363035,0.000009257385,0.00011697362,0.00024585228,0.000014353112,0.0000057921457,0.0009095812],"genre_scores_gemma":[0.40498188,0.000030195919,0.59463316,0.0001152293,0.000031963365,0.000097721364,0.000051855764,0.000031108033,0.000026864747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836195,0.00030997983,0.00036928614,0.00052105676,0.000026449185,0.0004112573],"domain_scores_gemma":[0.9994017,0.000022673728,0.00010448889,0.00039907865,0.000020669766,0.000051423576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007436176,0.0002030907,0.00028109716,0.00013856111,0.000027913535,0.000007949848,0.00034257388,0.00031431293,0.000008883524],"category_scores_gemma":[0.00014970773,0.00021328511,0.00011564704,0.00010282385,0.000097585595,0.0000018904849,0.00019016731,0.00011945114,0.0000023605073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006760041,0.00007297446,0.023944257,0.000021883994,0.000026381917,0.000007005381,0.00017445485,0.000058775593,0.95057166,0.0023984443,0.0000035029948,0.022653034],"study_design_scores_gemma":[0.0043293927,0.0015170401,0.067256436,0.000049697184,0.00005763315,0.00009427915,0.00061636424,0.015245097,0.8589003,0.043571398,0.006733405,0.0016289395],"about_ca_topic_score_codex":0.000020970476,"about_ca_topic_score_gemma":0.00006052011,"teacher_disagreement_score":0.15832968,"about_ca_system_score_codex":0.000026664693,"about_ca_system_score_gemma":0.00005484242,"threshold_uncertainty_score":0.8697514},"labels":[],"label_agreement":null},{"id":"W2394907457","doi":"10.1007/978-1-4939-3299-3_1","title":"PTEN: History of a Tumor Suppressor","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre","funders":"","keywords":"PTEN; Suppressor; Cancer research; Biology; Medicine; Cancer; Cell biology; Internal medicine; PI3K/AKT/mTOR pathway; Signal transduction","score_opus":0.0439089030900248,"score_gpt":0.3864423828261905,"score_spread":0.34253347973616566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394907457","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13780615,0.018795252,0.83240867,0.0001414143,0.0019010692,0.00034154032,0.000025503226,0.000027881846,0.008552538],"genre_scores_gemma":[0.14320703,0.00003884065,0.8542139,0.0011955791,0.00019315543,0.0001067701,0.000070247006,0.0000669022,0.0009075943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976085,0.0010467421,0.00039855912,0.0004989549,0.00010126441,0.00034598683],"domain_scores_gemma":[0.9988976,0.00005173837,0.00017321162,0.000618484,0.00014546298,0.00011346642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014057661,0.00020495904,0.00036343548,0.00012888848,0.000008329126,0.0000028524587,0.00042363346,0.00027120134,0.00004103187],"category_scores_gemma":[0.0010486181,0.00020423696,0.00013010572,0.000119737444,0.00031366214,0.0000021631204,0.00021770509,0.00016993641,0.000004805537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013117737,0.00005882985,0.0011476057,0.000016844911,0.000044087843,0.00001834809,0.000085726715,0.000113402995,0.9936832,0.00052755006,0.0021131155,0.0020600795],"study_design_scores_gemma":[0.0008067939,0.00042671929,0.000054792745,0.000012170026,0.000016851494,0.000026402271,0.00003196771,0.00013156745,0.8328944,0.0017523204,0.1636199,0.00022614059],"about_ca_topic_score_codex":0.000075194985,"about_ca_topic_score_gemma":0.000010352535,"teacher_disagreement_score":0.16150679,"about_ca_system_score_codex":0.0001481099,"about_ca_system_score_gemma":0.00041842533,"threshold_uncertainty_score":0.83285415},"labels":[],"label_agreement":null},{"id":"W2394972765","doi":"10.1007/978-1-4939-1258-2_14","title":"Comprehensive Quantitative Determination of PUFA-Related Bioactive Lipids for Functional Lipidomics Using High-Resolution Mass Spectrometry","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lipidomics; Polyunsaturated fatty acid; Lipid signaling; Chemistry; Computational biology; Mass spectrometry; Biological activity; High resolution; Chromatography; Biochemistry; Fatty acid; Biology; In vitro; Enzyme","score_opus":0.03409575090698908,"score_gpt":0.3679244222321611,"score_spread":0.333828671325172,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394972765","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23780917,0.0007468888,0.7603516,0.00005492969,0.0005838953,0.00030835636,0.000037805043,0.0000072224548,0.0001001587],"genre_scores_gemma":[0.17207499,0.00011754605,0.8273805,0.000081575796,0.00009908957,0.00003989712,0.00015722317,0.0000276696,0.00002155649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975742,0.0009233404,0.0005119558,0.0005590352,0.00008374107,0.00034769482],"domain_scores_gemma":[0.998704,0.0003124473,0.00035209657,0.00029594565,0.00029042465,0.000045071072],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010095474,0.00025228766,0.0005309084,0.00038421806,0.000078403405,0.000008232774,0.00016554694,0.00034942702,0.00000860304],"category_scores_gemma":[0.0010453458,0.0002520033,0.00019561412,0.00036884865,0.00027511205,0.0000057710618,0.000118073694,0.0001512263,7.067311e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026065522,0.00006071933,0.00042161255,0.00003091254,0.00015436215,3.3786188e-7,0.000021417105,0.0005170118,0.96299124,0.032928135,0.000006998736,0.0026065817],"study_design_scores_gemma":[0.001764998,0.0012223885,0.0015299855,0.000013540248,0.0000887203,0.000007977925,0.00012273593,0.015356265,0.9463122,0.031797655,0.0014561114,0.0003274592],"about_ca_topic_score_codex":0.000035220874,"about_ca_topic_score_gemma":0.000006815689,"teacher_disagreement_score":0.06702887,"about_ca_system_score_codex":0.00005884669,"about_ca_system_score_gemma":0.000051483585,"threshold_uncertainty_score":0.9999932},"labels":[],"label_agreement":null},{"id":"W2394996744","doi":"10.1007/978-1-61779-173-4_15","title":"The Automated Cell: Compound and Environment Screening System (ACCESS) for Chemogenomic Screening","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Automation; Computer science; Drug discovery; Set (abstract data type); Computational biology; Bioinformatics; Biology; Engineering","score_opus":0.0517880245553945,"score_gpt":0.3749798149166221,"score_spread":0.3231917903612276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2394996744","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.099925466,0.0036836364,0.8949925,0.000056454755,0.00008924511,0.0005092793,0.000016217356,0.000027070793,0.0007001712],"genre_scores_gemma":[0.26257378,0.00027599814,0.73666275,0.00008291087,0.000050940467,0.00016096917,0.000048546495,0.000038872047,0.000105220424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99807096,0.0006118428,0.00029532093,0.00049757585,0.0000671032,0.0004571898],"domain_scores_gemma":[0.9992898,0.0001054429,0.00009355043,0.00038660676,0.000036174373,0.00008843334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014083191,0.00019355377,0.0002098277,0.000067657165,0.00018372275,0.00003676523,0.00045014493,0.0002127304,0.00000455969],"category_scores_gemma":[0.00008509465,0.00015251104,0.00008499589,0.000074484626,0.0002442323,0.0000023331024,0.0005211302,0.00013439622,0.0000016017837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015808661,0.0000216871,0.0017581425,0.00003609049,0.0000523012,0.0000050927288,0.000030831015,0.00008786387,0.9825938,0.00030394405,0.00002953213,0.014922657],"study_design_scores_gemma":[0.00079739623,0.00031710736,0.0011815347,0.000014009106,0.000019558207,0.000026204565,0.00013097441,0.009997055,0.9771841,0.00033233527,0.0097621335,0.00023754661],"about_ca_topic_score_codex":0.000047624297,"about_ca_topic_score_gemma":0.000006515882,"teacher_disagreement_score":0.16264832,"about_ca_system_score_codex":0.000017357384,"about_ca_system_score_gemma":0.00002667434,"threshold_uncertainty_score":0.62192196},"labels":[],"label_agreement":null},{"id":"W2395020710","doi":"10.1007/978-1-4939-1568-2_31","title":"Mouse Models of Allergic Asthma","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; University of British Columbia","funders":"","keywords":"Ovalbumin; House dust mite; Immunology; Asthma; Sensitization; Medicine; Allergy; Disease; Antigen; Computer science; Allergen; Pathology","score_opus":0.025851132375561896,"score_gpt":0.38461719524783966,"score_spread":0.35876606287227775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395020710","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20097357,0.0007179601,0.795049,0.000094902985,0.00005280124,0.0001183803,0.0000021691985,0.000018633205,0.0029725884],"genre_scores_gemma":[0.27264243,0.000025606168,0.7261272,0.0009605946,0.000036612848,0.00001753733,0.000009885121,0.000020578475,0.00015955743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984272,0.000839564,0.00025958676,0.00022530263,0.000060913877,0.0001874461],"domain_scores_gemma":[0.9993849,0.000099541714,0.00006643395,0.00031952624,0.00004704807,0.00008254613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006453925,0.0001087073,0.00036279394,0.00014373724,0.0000114382865,0.0000013491981,0.00009627846,0.00015242284,0.00004558121],"category_scores_gemma":[0.0003154681,0.0000854133,0.000114215145,0.00012953424,0.00014273303,0.000011502557,0.000054086664,0.00011877209,0.0000041644184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009463902,0.00013269801,0.0019767443,0.000048182475,0.000028805938,0.000020841366,0.00004536955,0.000514503,0.909223,0.011894014,0.000023038781,0.075998135],"study_design_scores_gemma":[0.0032952211,0.0016482933,0.0028817232,0.00008100973,0.000062189865,0.00004343457,0.00009389377,0.020053439,0.8950397,0.04146434,0.03494924,0.000387548],"about_ca_topic_score_codex":0.0000122598,"about_ca_topic_score_gemma":0.0000013872892,"teacher_disagreement_score":0.075610586,"about_ca_system_score_codex":0.00001233413,"about_ca_system_score_gemma":0.00004082495,"threshold_uncertainty_score":0.34830534},"labels":[],"label_agreement":null},{"id":"W2395104174","doi":"10.1007/978-1-4939-1096-0_6","title":"Planar Patch Clamp for Neuronal Networks—Considerations and Future Perspectives","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience and Neural Engineering","field":"Neuroscience","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Patch clamp; Pipette; Current clamp; Ion channel; Voltage clamp; Neuroscience; Clamp; Nanotechnology; Computer science; Electrophysiology; Materials science; Chemistry; Biology","score_opus":0.03193079553745665,"score_gpt":0.3700488222821831,"score_spread":0.33811802674472646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395104174","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06546061,0.00014344571,0.93168604,0.0017388174,0.00051647215,0.00022271,0.0000045042275,0.000044345794,0.00018306509],"genre_scores_gemma":[0.4859623,0.00020869164,0.5083789,0.0048975702,0.00037387013,0.00010374954,0.0000021460708,0.00003499998,0.00003770982],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837214,0.00062949647,0.00015473283,0.0005076531,0.0000433451,0.00029262732],"domain_scores_gemma":[0.9987536,0.0009730601,0.00003742442,0.00016781314,0.000013148092,0.000054937966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042299833,0.00013118703,0.00017616329,0.00010540655,0.00011218682,0.000028394394,0.000117009695,0.00009111496,0.0000057103853],"category_scores_gemma":[0.0012478685,0.00011727033,0.000044890458,0.00017203912,0.00015386488,0.00004998507,0.000041804742,0.00019539181,4.885729e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000071332242,0.000011330054,0.00011400777,0.0000034301647,7.381434e-7,0.0000052591504,0.00007185472,0.00023414246,0.846288,0.14862768,0.000010401456,0.004625978],"study_design_scores_gemma":[0.0008913765,0.00063356676,0.0010796465,0.0000088167835,0.000013691665,0.00020029068,0.00012698835,0.11052406,0.77335864,0.094355375,0.01830081,0.0005067255],"about_ca_topic_score_codex":0.0000025122308,"about_ca_topic_score_gemma":0.0000029090622,"teacher_disagreement_score":0.4233071,"about_ca_system_score_codex":0.000009012739,"about_ca_system_score_gemma":0.0000113600745,"threshold_uncertainty_score":0.4782145},"labels":[],"label_agreement":null},{"id":"W2395270384","doi":"10.1007/978-1-62703-065-6_5","title":"Computational Prediction of Secondary and Supersecondary Structures","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; University of California, Irvine; Alberta Innovates; Purdue University","keywords":"Sequence (biology); Computer science; Artificial intelligence; Biology","score_opus":0.010081231730590877,"score_gpt":0.32961650234583456,"score_spread":0.31953527061524367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395270384","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42260766,0.0032406854,0.57309437,0.00001871109,0.00016568271,0.00010470663,0.000058082824,0.000004665361,0.0007054756],"genre_scores_gemma":[0.5202635,0.000030045607,0.47931495,0.00016111952,0.00004998061,0.0000074347267,0.00015624138,0.000008922087,0.0000078107905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989978,0.00034395175,0.0002177692,0.00020515191,0.00003978087,0.00019556284],"domain_scores_gemma":[0.99966323,0.000030562853,0.00006174538,0.00016009701,0.00003321411,0.000051175346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043718886,0.00011586273,0.00016842053,0.00008062299,0.000022528327,0.0000031076677,0.000085595755,0.00022924763,0.000023761822],"category_scores_gemma":[0.00011056503,0.00010926156,0.00004551167,0.000066974215,0.00017792845,0.0000040483487,0.00010620588,0.00012359452,1.9998754e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031292137,0.000017045651,0.020333849,0.000021340999,0.00003708691,6.847027e-7,0.00006073635,0.00008485295,0.94492644,0.0076719974,0.000016708638,0.026797993],"study_design_scores_gemma":[0.0012656971,0.00043304035,0.111627676,0.000009417213,0.00003269695,0.0001507693,0.00013051194,0.0004742752,0.8105364,0.06851125,0.00650952,0.00031876774],"about_ca_topic_score_codex":0.000010821401,"about_ca_topic_score_gemma":0.0000021247176,"teacher_disagreement_score":0.13439003,"about_ca_system_score_codex":0.000006897431,"about_ca_system_score_gemma":0.000040164217,"threshold_uncertainty_score":0.44555572},"labels":[],"label_agreement":null},{"id":"W2395299758","doi":"10.1007/978-1-61779-376-9_21","title":"UV-Induced DNA Damage and DNA Repair in Ribosomal Genes Chromatin","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Light effects on plants","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin; DNA; DNA repair; Gene; Ribosomal DNA; Biology; Genetics; DNA damage; Phylogenetics","score_opus":0.04382532058900732,"score_gpt":0.3260364186485944,"score_spread":0.28221109805958705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395299758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99801916,0.00026401135,0.0003551904,0.00014906561,0.000127693,0.00025631167,0.0000141689425,0.00006453931,0.00074987015],"genre_scores_gemma":[0.78362346,0.000030619973,0.21568723,0.0005079432,0.00005044124,0.000048056663,0.00002428839,0.0000026442026,0.000025341262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700403,0.0018056951,0.00028823997,0.00047418324,0.0000574324,0.00037038827],"domain_scores_gemma":[0.99936444,0.00036326918,0.00007692383,0.000107770786,0.000016397104,0.000071207585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012686547,0.00018104077,0.0003212618,0.00004910096,0.000040963805,0.000008079181,0.00024670552,0.0002702567,0.00010320653],"category_scores_gemma":[0.00027731393,0.00007777445,0.000062635496,0.00031737745,0.000094775525,0.000044441727,0.00017503927,0.0001647773,0.000008462417],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019699066,0.000054180084,0.040318012,0.0000065823456,0.000008294056,0.000076092874,0.000085448126,6.0706974e-8,0.9328176,0.00047175316,0.000006238847,0.026136054],"study_design_scores_gemma":[0.00018605936,0.00030919627,0.39618826,0.000014877209,0.0000048598777,0.000017284081,0.000041862022,0.00007660331,0.5997391,0.0029190287,0.00032274664,0.00018017329],"about_ca_topic_score_codex":0.00054292247,"about_ca_topic_score_gemma":0.00053845,"teacher_disagreement_score":0.35587025,"about_ca_system_score_codex":0.000018653263,"about_ca_system_score_gemma":0.000006664913,"threshold_uncertainty_score":0.317155},"labels":[],"label_agreement":null},{"id":"W2395327707","doi":"10.1007/978-1-59745-204-5_24","title":"Phagocytosis of Candida albicans by RNAi-Treated Drosophila S2 Cells","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Innate immune system; RNA interference; Biology; Drosophila melanogaster; Phagocytosis; Candida albicans; Immunity; Drosophila (subgenus); Gene; SAMHD1; Nucleic acid; Cell biology; Genetics; Immune system; RNA","score_opus":0.01616470201085055,"score_gpt":0.31772508309330655,"score_spread":0.301560381082456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395327707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7638846,0.0073395465,0.22586417,0.00017549579,0.0008742132,0.00049243827,0.00012439014,0.000082540755,0.0011625785],"genre_scores_gemma":[0.7247626,0.00090734253,0.26907617,0.0011021862,0.000019918654,0.00015753387,0.0003638283,0.00011699526,0.0034934094],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9952156,0.0029474169,0.00063850847,0.00053476176,0.000035294644,0.0006284125],"domain_scores_gemma":[0.9986756,0.00039962164,0.00023188531,0.0005797602,0.00007976853,0.00003337169],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093305064,0.0003296869,0.0007920121,0.00032816152,0.00010713752,0.0000027932726,0.00048233612,0.00072104414,0.000648069],"category_scores_gemma":[0.00023608684,0.00030775773,0.00018648015,0.0004543509,0.0007282784,0.000027629996,0.00016546757,0.00043559686,0.00009856897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020583255,0.00016107199,0.00068913645,0.000009872238,0.00018300397,0.000052956668,0.00019571623,0.000004093356,0.9946207,0.0012034007,0.0004978559,0.0021763698],"study_design_scores_gemma":[0.00147224,0.0004092568,0.00011231547,0.000015190758,0.000039790222,0.00015321071,0.000039183717,0.000013063893,0.9881532,0.0009605173,0.008350347,0.00028168072],"about_ca_topic_score_codex":0.001007382,"about_ca_topic_score_gemma":0.000014927685,"teacher_disagreement_score":0.04321199,"about_ca_system_score_codex":0.00008177713,"about_ca_system_score_gemma":0.000115125615,"threshold_uncertainty_score":0.9999375},"labels":[],"label_agreement":null},{"id":"W2395351616","doi":"10.1007/978-1-60761-931-4_17","title":"GLARE: A Tool for Product-Oriented Design of Combinatorial Libraries","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"","keywords":"Key (lock); Computer science; Reagent; Selection (genetic algorithm); Software; Product (mathematics); Matching (statistics); Combinatorial chemistry; Theoretical computer science; Chemistry; Mathematics; Programming language; Artificial intelligence; Organic chemistry; Operating system","score_opus":0.026708924295192334,"score_gpt":0.3759236962905738,"score_spread":0.3492147719953815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395351616","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058649327,0.00015050014,0.9901144,0.00033873683,0.002771855,0.00064435595,0.0000060890184,0.00005105492,0.000058088255],"genre_scores_gemma":[0.004638915,0.000001760362,0.99500465,0.00012405841,0.000070761664,0.0001290849,0.0000086577065,0.000013306453,0.000008822034],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9966538,0.0020044409,0.00041430758,0.0005322831,0.00010950136,0.00028566434],"domain_scores_gemma":[0.9968603,0.0021731546,0.00015529334,0.0006109926,0.0001612206,0.00003898466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003579007,0.00015863588,0.00034107122,0.000214764,0.00003860392,0.000028588758,0.0008240193,0.00013794274,0.0000053012996],"category_scores_gemma":[0.0040698936,0.00015166373,0.000094486546,0.0005912143,0.00018404383,0.00015958589,0.00035429295,0.00023466545,8.033455e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003877312,0.00006131173,0.00013514308,0.000011539109,0.00001384954,0.0000022257332,0.00009208581,0.00078701024,0.38039112,0.5852301,0.000017326907,0.033219486],"study_design_scores_gemma":[0.00058947963,0.00016901553,0.0002659244,0.000004535754,0.0000053050267,0.0000068044874,0.0000024758062,0.04228597,0.4188361,0.5354464,0.0022384208,0.0001495937],"about_ca_topic_score_codex":0.000007775486,"about_ca_topic_score_gemma":4.3652577e-7,"teacher_disagreement_score":0.04978373,"about_ca_system_score_codex":0.0000145406475,"about_ca_system_score_gemma":0.00025429405,"threshold_uncertainty_score":0.61846673},"labels":[],"label_agreement":null},{"id":"W2395371618","doi":"10.1007/978-1-60327-367-1_18","title":"Analysis of the Impact of Genetic Variation on Human Gene Expression","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; McGill Genome Centre","funders":"Genome Canada","keywords":"Genetic architecture; Expression quantitative trait loci; Phenotype; Biology; Expression (computer science); Genetic variation; Gene; Human genetic variation; Gene expression; Variation (astronomy); Genetics; Quantitative trait locus; Computational biology; Trait; Human disease; Evolutionary biology; Human genome; Genome; Genotype; Computer science; Single-nucleotide polymorphism","score_opus":0.052587396763934154,"score_gpt":0.4375412906729572,"score_spread":0.38495389390902307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395371618","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028220018,0.8736846,0.09631177,0.0000035764892,0.000256268,0.0005886805,0.00039005777,0.0000051974775,0.0005398402],"genre_scores_gemma":[0.0042500338,0.8514898,0.14336202,0.000029253928,0.00008936953,0.00003227355,0.00060667115,0.000038452807,0.000102157974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997366,0.0013276689,0.0005775138,0.00044517344,0.000085029526,0.00019860438],"domain_scores_gemma":[0.99843985,0.00007050376,0.0006193655,0.0007696719,0.000062190185,0.000038417795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063835137,0.00027782514,0.0011149895,0.0003547862,0.00004176281,0.0000051317465,0.0005369859,0.00073400413,0.00003295219],"category_scores_gemma":[0.00022310918,0.00017437719,0.0011375686,0.000471531,0.00012473595,5.0014944e-7,0.00024046347,0.00024609079,5.044013e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010612995,0.000094005154,0.0009831706,0.00022105132,0.0007562891,0.0000016532878,0.0000187869,0.00033869885,0.91966367,0.000053335887,0.000012413946,0.07784634],"study_design_scores_gemma":[0.0022187836,0.0046641314,0.040919792,0.0041451775,0.016575128,0.00007595039,0.000035139223,0.00030230422,0.6242329,0.001986627,0.3017684,0.0030757028],"about_ca_topic_score_codex":0.000095323565,"about_ca_topic_score_gemma":0.0000056926747,"teacher_disagreement_score":0.301756,"about_ca_system_score_codex":0.000014420618,"about_ca_system_score_gemma":0.000107894324,"threshold_uncertainty_score":0.71108955},"labels":[],"label_agreement":null},{"id":"W2395624802","doi":"10.1007/978-1-4939-0799-1_2","title":"Isolation of Yeast Nucleic Acids","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Nucleic acid; Plasmid; Biology; Reverse transcriptase; DNA; Yeast; Isolation (microbiology); RNA; Saccharomyces cerevisiae; genomic DNA; Model organism; Genetics; Computational biology; Gene; Microbiology","score_opus":0.012763134387891032,"score_gpt":0.3711500610068246,"score_spread":0.3583869266189336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395624802","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09535266,0.00021203813,0.9014037,0.000106440784,0.00006408872,0.00018242848,0.000007807295,0.000017306615,0.0026534903],"genre_scores_gemma":[0.3524675,0.000036475678,0.64695036,0.00030354073,0.00003650752,0.000051828152,0.00008770863,0.000018763007,0.000047312755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982167,0.00072847895,0.00034697796,0.00042253546,0.00004361639,0.0002416752],"domain_scores_gemma":[0.9991593,0.000025982186,0.00013604802,0.0005679569,0.00006421427,0.00004653749],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090504694,0.00016047829,0.00024588205,0.00011467075,0.000029002449,0.0000040831833,0.00029561046,0.0003607631,0.000020325826],"category_scores_gemma":[0.00028914819,0.00015771817,0.00011714249,0.00019251305,0.0001924563,0.0000014276753,0.00015640931,0.00012379646,0.0000037546706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019514911,0.000042737054,0.0035254818,0.0000070910323,0.000016968428,3.9932394e-7,0.0000101397545,0.000025981353,0.9682873,0.01564981,0.000038601454,0.012375973],"study_design_scores_gemma":[0.00032297862,0.00033716092,0.0018364696,0.000007578293,0.000011613567,0.000009943104,0.000008435162,0.00045881563,0.9619987,0.009660836,0.025159823,0.00018763877],"about_ca_topic_score_codex":0.000020206751,"about_ca_topic_score_gemma":0.000008255546,"teacher_disagreement_score":0.25711483,"about_ca_system_score_codex":0.0000090534795,"about_ca_system_score_gemma":0.000025664518,"threshold_uncertainty_score":0.64315605},"labels":[],"label_agreement":null},{"id":"W2395682772","doi":"10.1007/978-1-60761-454-8_16","title":"N-Linked Protein Glycosylation in a Bacterial System","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences; Alberta Glycomics Centre; University of Alberta","funders":"","keywords":"Campylobacter jejuni; Glycosylation; Biology; Biochemistry; Glycoprotein; Bacteria; Archaea; Chemistry; Genetics","score_opus":0.02021192528289943,"score_gpt":0.3883133818409367,"score_spread":0.3681014565580373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395682772","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62146044,0.00026137428,0.3751827,0.00024482372,0.000118388554,0.0007744022,0.0000049818073,0.000022404103,0.0019304871],"genre_scores_gemma":[0.75053024,0.000011296262,0.24885798,0.00013253548,0.000092753326,0.000111379864,0.00012453078,0.000017625562,0.00012164371],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969007,0.0015238905,0.0004553912,0.0005593771,0.00010862738,0.00045202742],"domain_scores_gemma":[0.9993017,0.000021170647,0.000091749775,0.00043723194,0.00007061887,0.00007758497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015214689,0.00020385682,0.00028705713,0.00029789854,0.000035167006,0.000022655411,0.00027352007,0.0004317739,0.000031298823],"category_scores_gemma":[0.00053050445,0.00020176602,0.000088404384,0.00038379588,0.00006415869,0.000004562117,0.00008688035,0.0002420792,0.000012280038],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027480169,0.00006709638,0.0005767943,0.00001528323,0.0000076040947,0.000027102318,0.000020374124,0.00006699649,0.97171474,0.0037077654,0.0000065847044,0.023514867],"study_design_scores_gemma":[0.0021834304,0.0007901569,0.0055019404,0.000053120788,0.0000039570277,0.00002569467,0.000035645546,0.0012471149,0.9780876,0.0022473808,0.009468502,0.00035546295],"about_ca_topic_score_codex":0.00007182806,"about_ca_topic_score_gemma":0.000065076085,"teacher_disagreement_score":0.12906982,"about_ca_system_score_codex":0.00007629655,"about_ca_system_score_gemma":0.000095794916,"threshold_uncertainty_score":0.822778},"labels":[],"label_agreement":null},{"id":"W2395740383","doi":"10.1007/978-1-4939-0799-1_21","title":"Screening Combinatorial Libraries of Cyclic Peptides Using the Yeast Two-Hybrid Assay","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Cyclic peptide; Intein; Yeast; Peptide; Two-hybrid screening; Peptide library; Biochemistry; Computational biology; Function (biology); Biology; Chemistry; Combinatorial chemistry; Peptide sequence; Gene; Genetics; RNA","score_opus":0.018704731566691522,"score_gpt":0.3391024330261916,"score_spread":0.3203977014595001,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395740383","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46655187,0.0001359613,0.5328594,0.00005943216,0.00019204301,0.00007123085,0.000006983306,0.0000048734905,0.000118202595],"genre_scores_gemma":[0.75081396,0.000007587017,0.24870913,0.00018901164,0.00016103686,0.0000057519023,0.00009208256,0.000013838112,0.000007599015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980014,0.0011438216,0.00028682136,0.00029134992,0.00006084375,0.00021575649],"domain_scores_gemma":[0.999404,0.00007217507,0.00014153565,0.0003020654,0.00004374551,0.00003648893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072792516,0.00015265914,0.00023057323,0.000045032102,0.000050618248,0.000015180073,0.00027632195,0.00015890249,0.000007287688],"category_scores_gemma":[0.0005249663,0.00011172011,0.000096231255,0.00012502114,0.00026839878,0.000003869865,0.00019971085,0.00014361588,2.676219e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005028766,0.000011006926,0.0025300344,0.000008872076,0.000024222938,5.718834e-7,0.000015125345,0.00005837161,0.983286,0.0048090466,0.000005351245,0.009201087],"study_design_scores_gemma":[0.00039934495,0.00009373323,0.0004940452,0.000010554788,0.000013946676,0.000012694386,0.000011641695,0.0011216841,0.97948146,0.016690759,0.001530772,0.00013935214],"about_ca_topic_score_codex":0.000030439844,"about_ca_topic_score_gemma":0.0000013198228,"teacher_disagreement_score":0.2842621,"about_ca_system_score_codex":0.000005259508,"about_ca_system_score_gemma":0.000021844833,"threshold_uncertainty_score":0.4555814},"labels":[],"label_agreement":null},{"id":"W2395795177","doi":"10.1007/978-1-4939-1804-1_6","title":"Beyond the Island: Epigenetic Biomarkers of Colorectal and Prostate Cancer","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University Health Network; University of Toronto","funders":"","keywords":"Epigenetics; Cancer epigenetics; DNA methylation; Biology; CpG site; Epigenomics; Cancer research; Epigenetics of physical exercise; Histone; Cancer; Genetics; DNA; Histone methyltransferase; Gene; Gene expression","score_opus":0.018469358977182892,"score_gpt":0.40615191484041163,"score_spread":0.38768255586322875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395795177","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008201434,0.9316382,0.06616704,0.000023266079,0.00028323647,0.00074245967,0.00007457365,0.0000037801556,0.00024733448],"genre_scores_gemma":[0.00008203161,0.9506111,0.048635393,0.00004783404,0.00006664363,0.00024532274,0.00019159388,0.000054949935,0.00006511294],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956772,0.0025559561,0.00070624775,0.00064443063,0.00007727556,0.0003388885],"domain_scores_gemma":[0.99867594,0.0002289285,0.00046343112,0.00050457515,0.0000672045,0.00005992751],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017225223,0.00039241428,0.0010784923,0.0001647472,0.000046027428,0.0000133505755,0.00035494464,0.0006671375,0.000010277464],"category_scores_gemma":[0.0003386505,0.000270165,0.00027343657,0.00024949704,0.00041621446,9.1959697e-7,0.00028461576,0.00023910447,8.1887106e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020818146,0.000022013395,0.00028473188,0.0012249909,0.0002815856,0.0000020388973,0.00003420154,0.000012632498,0.1020296,0.00016051979,0.00002068301,0.8959062],"study_design_scores_gemma":[0.00041197825,0.000489196,0.00006881255,0.0004975243,0.0004112597,0.000010045696,0.000010857891,0.000043456843,0.049780343,0.0024291857,0.9453204,0.0005268959],"about_ca_topic_score_codex":0.00005998548,"about_ca_topic_score_gemma":0.00009519918,"teacher_disagreement_score":0.94529974,"about_ca_system_score_codex":0.000019356808,"about_ca_system_score_gemma":0.00016979674,"threshold_uncertainty_score":0.999975},"labels":[],"label_agreement":null},{"id":"W2395959166","doi":"10.1007/978-1-61779-882-5_21","title":"Rolling Circle Amplification-Mediated Long Hairpin RNA Library Construction in Plants","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Small hairpin RNA; Gene; Computational biology; Gene silencing; Biology; Genetics; RNA; RNA silencing; RNA interference; Cloning (programming); Functional genomics; Population; Complementary DNA; Genome; Computer science; Genomics","score_opus":0.01310349005698176,"score_gpt":0.37596604646952836,"score_spread":0.3628625564125466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2395959166","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4022177,0.0028628532,0.59396744,0.000051679395,0.00028466783,0.00012604243,0.000005410584,0.00001669373,0.00046749692],"genre_scores_gemma":[0.6904003,0.00033210823,0.3087398,0.0001470754,0.000105014034,0.00003324757,0.0001992398,0.000025831458,0.000017361126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985109,0.0004111514,0.00031127443,0.0003221662,0.000041692507,0.00040281587],"domain_scores_gemma":[0.99949557,0.000057080764,0.000063052226,0.0002940907,0.000008928111,0.000081289436],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048511312,0.00015215142,0.00020696042,0.00018033646,0.000023138085,0.0000099758545,0.00016750414,0.0002935868,0.000018151457],"category_scores_gemma":[0.00018005609,0.00017441409,0.00005537887,0.0002026075,0.00007218343,0.000010012714,0.00009496312,0.00017204518,0.000005161856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027188686,0.000036101326,0.09983083,0.000010938569,0.000015840655,0.0000037063076,0.000040626855,0.0004397925,0.8842597,0.000251516,0.0000070085707,0.015076752],"study_design_scores_gemma":[0.000568414,0.00005362695,0.049173176,0.00001849,0.0000059240165,0.000032546563,0.000066555585,0.0005531531,0.9464993,0.00044840164,0.0023183264,0.00026208896],"about_ca_topic_score_codex":0.000009473449,"about_ca_topic_score_gemma":0.0000050010153,"teacher_disagreement_score":0.28818262,"about_ca_system_score_codex":0.00001096121,"about_ca_system_score_gemma":0.000028436272,"threshold_uncertainty_score":0.71124},"labels":[],"label_agreement":null},{"id":"W2396009463","doi":"10.1007/978-1-62703-547-7_31","title":"Orthotopic, Syngeneic Mouse Model to Study the Effects of Epithelial–Stromal Interaction","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Stromal cell; Ovarian cancer; Stroma; Cancer research; Immune system; Biology; Epithelium; Animal model; Disease; Cancer; Immunology; Medicine; Pathology; Internal medicine; Immunohistochemistry; Endocrinology","score_opus":0.02225553997859154,"score_gpt":0.41585838497175937,"score_spread":0.39360284499316783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396009463","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81470335,0.00024033462,0.1837985,0.00007074107,0.00008815404,0.0009998092,0.0000059501576,0.0000046805258,0.00008849579],"genre_scores_gemma":[0.89476156,0.000047766993,0.10415953,0.00020716323,0.000028259094,0.00062979077,0.000013814144,0.000018421879,0.00013368609],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99817073,0.0009048762,0.00022286795,0.0003527547,0.00007426811,0.00027448166],"domain_scores_gemma":[0.99926007,0.000069047215,0.00005949246,0.00047694624,0.00006435556,0.00007007407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036142304,0.00014769161,0.00020138962,0.000086657456,0.00003525696,0.000010842099,0.00026897393,0.000099449986,0.0000141219225],"category_scores_gemma":[0.00037697837,0.00010467057,0.00008495587,0.000121384495,0.00006211993,0.0000027648005,0.00022907458,0.00011789767,0.0000072838907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000699231,0.00022443278,0.0055931387,0.000010156199,0.00013313141,0.0000042464144,0.00008817354,0.00016674964,0.96781164,0.000043248605,0.000015831767,0.025839346],"study_design_scores_gemma":[0.0007446137,0.0013860838,0.0024045818,0.000004724112,0.000019552312,0.0000032870373,0.00005782029,0.00023948734,0.9942943,0.00056337676,0.00017944686,0.00010274522],"about_ca_topic_score_codex":0.000723366,"about_ca_topic_score_gemma":0.00013085298,"teacher_disagreement_score":0.08005825,"about_ca_system_score_codex":0.000023423177,"about_ca_system_score_gemma":0.000039556006,"threshold_uncertainty_score":0.42683423},"labels":[],"label_agreement":null},{"id":"W2396044539","doi":"10.1007/978-1-59745-553-4_2","title":"Single Base Extension in Multiplex Blood Group Genotyping","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Blood groups and transfusion","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services","funders":"","keywords":"Genotyping; Single-nucleotide polymorphism; Multiplex; Genotype; Multiplex polymerase chain reaction; Whole blood; SNP; Oligonucleotide; Biology; Blood transfusion; SNP genotyping; Immunology; Medicine; Molecular biology; Genetics; Polymerase chain reaction; DNA; Gene","score_opus":0.07751692254562835,"score_gpt":0.43179607572363043,"score_spread":0.35427915317800207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396044539","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013647598,0.84927845,0.14892091,0.000043548785,0.00020760366,0.0011036231,0.0000053788317,0.000039995353,0.00026401173],"genre_scores_gemma":[0.0000087652525,0.5650256,0.43441084,0.00025662885,0.0000591235,0.00004593326,0.00013340171,0.000047601665,0.000012069141],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948076,0.0025423446,0.0010010069,0.000982407,0.000107071995,0.0005595854],"domain_scores_gemma":[0.99856853,0.00037245915,0.00019932541,0.0006998036,0.00003929595,0.00012059064],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019193516,0.000531301,0.002614053,0.0008055899,0.000031515254,0.0000088297875,0.0002022819,0.0011547431,0.000035526664],"category_scores_gemma":[0.0005420761,0.00042925798,0.0005286366,0.0007562954,0.00008934666,0.00001797895,0.0000964104,0.0010859293,0.000008036538],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027271719,0.0005921761,0.000033531538,0.00231374,0.00006957595,0.0009944747,0.000022220716,5.835932e-7,0.06309851,0.00026572318,0.0000012866013,0.9325809],"study_design_scores_gemma":[0.005299683,0.0019509118,0.00020375158,0.026098847,0.0028671324,0.0013234458,0.000016300646,0.000118426615,0.0037858707,0.0021216888,0.95493674,0.0012771887],"about_ca_topic_score_codex":0.000109804765,"about_ca_topic_score_gemma":0.000047117297,"teacher_disagreement_score":0.9549355,"about_ca_system_score_codex":0.000096344185,"about_ca_system_score_gemma":0.00009165094,"threshold_uncertainty_score":0.99981594},"labels":[],"label_agreement":null},{"id":"W2396053010","doi":"10.1007/978-1-4939-0799-1_14","title":"Spontaneous Mutagenesis Assay","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Mutagenesis; Auxotrophy; Genome instability; DNA; Mutant; Saccharomyces cerevisiae; Biology; Mutation; DNA repair; Mutation rate; DNA damage; Genetics; genomic DNA; Molecular biology; Gene","score_opus":0.011592485406286957,"score_gpt":0.339940621443104,"score_spread":0.32834813603681706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396053010","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13112979,0.0003784198,0.8634928,0.000083650644,0.00034578168,0.00017050834,0.000003909513,0.00003342754,0.004361707],"genre_scores_gemma":[0.17069767,0.00003166571,0.8274247,0.0010399676,0.000116025374,0.000056967394,0.00005825523,0.000050400216,0.000524349],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961024,0.0023902187,0.00031231597,0.000667672,0.00007610933,0.00045127113],"domain_scores_gemma":[0.9989424,0.000100687445,0.00008613863,0.000729569,0.000048182585,0.000093074916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023839981,0.00024270242,0.00030635254,0.0001255673,0.00003834773,0.000011918232,0.00039577959,0.00042402782,0.00005050857],"category_scores_gemma":[0.0012337528,0.00024059079,0.00015037289,0.0001615695,0.00010577425,0.0000013130237,0.0002372231,0.00014643413,0.000022892971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035862173,0.000037788785,0.00032695592,0.0000069728926,0.000028475368,0.00009235434,0.000010554218,0.00006167084,0.94972646,0.0041559245,0.000034308167,0.04548265],"study_design_scores_gemma":[0.00039938057,0.00037217597,0.000108717395,0.0000052312216,0.000014614277,0.00038291662,0.000012420829,0.00048318534,0.940507,0.006886056,0.050525952,0.0003023747],"about_ca_topic_score_codex":0.000021226282,"about_ca_topic_score_gemma":0.000024749956,"teacher_disagreement_score":0.050491646,"about_ca_system_score_codex":0.000023300969,"about_ca_system_score_gemma":0.000038005466,"threshold_uncertainty_score":0.98110074},"labels":[],"label_agreement":null},{"id":"W2396095339","doi":"10.1007/978-1-62703-128-8_30","title":"Methods to Culture, Differentiate, and Characterize Neural Stem Cells from the Adult and Embryonic Mouse Central Nervous System","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Neurosphere; Neural stem cell; Embryonic stem cell; Biology; Progenitor cell; Central nervous system; In vitro; Neuroscience; Cell biology; Stem cell; Neural cell; Adult stem cell; Cell; Genetics; Gene","score_opus":0.03862232057240281,"score_gpt":0.33632623822704144,"score_spread":0.29770391765463866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396095339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7082475,0.0002841222,0.28998333,0.000090680434,0.00091084064,0.00036653632,0.00005605013,0.00005066474,0.000010310378],"genre_scores_gemma":[0.77864844,0.0001643961,0.21705921,0.0037721777,0.00012995067,0.00008368076,0.000004201324,0.00006798951,0.000069979316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9911366,0.006900576,0.0003566329,0.00073942554,0.00011243912,0.0007542943],"domain_scores_gemma":[0.99802196,0.0011182257,0.00013879858,0.0004261099,0.000023458088,0.00027144796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067662814,0.00034158002,0.0004807183,0.0000840988,0.00014719393,0.00007611947,0.0003733763,0.00017368577,0.0000055314827],"category_scores_gemma":[0.00034857204,0.00023145974,0.00008153758,0.00023961464,0.00013076999,0.00006843482,0.00045008012,0.00032662603,0.000004824779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045817167,0.000038387083,0.0006501623,0.000019659286,0.000008599302,0.000020365022,0.00028103805,0.0000033435551,0.9837051,0.0036057374,0.0000044434155,0.011617318],"study_design_scores_gemma":[0.00031736252,0.00015237089,0.004698395,0.000014036021,0.000037908427,0.000075631186,0.00007731771,0.00090608187,0.99292475,0.00006322615,0.0004921781,0.00024076048],"about_ca_topic_score_codex":0.000040335446,"about_ca_topic_score_gemma":0.000003946936,"teacher_disagreement_score":0.07292412,"about_ca_system_score_codex":0.00002629399,"about_ca_system_score_gemma":0.00001004252,"threshold_uncertainty_score":0.9438654},"labels":[],"label_agreement":null},{"id":"W2396135079","doi":"10.1007/978-1-4939-1755-6_3","title":"Design and Application of Light-Activated Probes for Cellular Signaling","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"G protein-coupled receptor; Computational biology; Cell; Transcription factor; Nuclear receptor; Receptor; Signal transduction; Peptide; Chemistry; Cell biology; Drug; Biology; Gene; Biochemistry; Pharmacology","score_opus":0.01434921573002787,"score_gpt":0.3301084146864599,"score_spread":0.315759198956432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396135079","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13371997,0.0004041031,0.8655441,0.00006896033,0.000010948898,0.00021064731,0.0000013025747,0.000004191677,0.000035787853],"genre_scores_gemma":[0.4267772,0.0000141282235,0.57303166,0.00004796981,0.000021622887,0.000067079665,0.000023368015,0.000010368672,0.000006566544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988007,0.00045439284,0.00023405797,0.00033141812,0.000027881126,0.00015155092],"domain_scores_gemma":[0.9994822,0.00012806669,0.00010354796,0.00020466698,0.00004910969,0.000032399217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009863323,0.00011015003,0.00024029857,0.00005266517,0.000021685588,0.0000043053365,0.00011399431,0.0001882319,0.000002083251],"category_scores_gemma":[0.00037925452,0.0000974302,0.000074367395,0.00009557762,0.00006437189,0.0000010076503,0.000051859315,0.000043416945,1.6071164e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004126374,0.00003003323,0.0002128238,0.00002302486,0.00003527227,7.940904e-8,0.000008711403,0.0001482196,0.9736881,0.00053559506,0.0000024816438,0.025274368],"study_design_scores_gemma":[0.00023825628,0.00014110323,0.000008119521,0.0000064259298,0.000025544263,6.4772684e-7,0.0000065580525,0.003109992,0.98833466,0.0044367467,0.0035783937,0.000113538226],"about_ca_topic_score_codex":0.000009013041,"about_ca_topic_score_gemma":6.327065e-7,"teacher_disagreement_score":0.29305723,"about_ca_system_score_codex":0.0000049301834,"about_ca_system_score_gemma":0.0000095281175,"threshold_uncertainty_score":0.39730883},"labels":[],"label_agreement":null},{"id":"W2396183670","doi":"10.1007/978-1-62703-386-2_15","title":"Identification of Thioredoxin Target Protein Networks in Cardiac Tissues of a Transgenic Mouse","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; National Institutes of Health; Canadian Institute for Theoretical Astrophysics","keywords":"Proteome; Thioredoxin; Proteomics; Cysteine; Quantitative proteomics; Computational biology; Transgene; Genetically modified mouse; Chemistry; Biochemistry; Redox; Stable isotope labeling by amino acids in cell culture; Biology; Oxidative stress; Enzyme; Gene","score_opus":0.009642218622134621,"score_gpt":0.3427458202739592,"score_spread":0.3331036016518246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396183670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63652116,0.0019008402,0.36086634,0.000036009907,0.000067118126,0.0004943607,0.000015761101,0.0000036849556,0.00009473642],"genre_scores_gemma":[0.87260395,0.00021219089,0.1266411,0.000028504846,0.000025609766,0.00020626935,0.00011702262,0.00001814184,0.00014720685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967144,0.001899101,0.00064527936,0.00041468962,0.00004875468,0.00027774894],"domain_scores_gemma":[0.99916697,0.00004564492,0.00022996835,0.0004252893,0.00009764742,0.000034482084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001171827,0.00017722162,0.00044932845,0.00015087078,0.000013707506,0.0000034971492,0.00030025377,0.0004741657,0.000023164615],"category_scores_gemma":[0.0002787384,0.00016408047,0.0001399206,0.00023545943,0.0003224299,0.0000046120144,0.00008339527,0.00017144848,0.0000014288173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057382083,0.00007360446,0.011836478,0.000028847924,0.00005531239,5.982099e-7,0.000060786482,0.00034088013,0.98275024,0.00077868876,0.000007394132,0.004009804],"study_design_scores_gemma":[0.000351531,0.00022512504,0.004900804,0.000016054415,0.000007883541,5.6006286e-7,0.000060882972,0.00018791422,0.99177873,0.0020539595,0.00026622825,0.00015035478],"about_ca_topic_score_codex":0.00012565663,"about_ca_topic_score_gemma":0.000018814211,"teacher_disagreement_score":0.2360828,"about_ca_system_score_codex":0.000010065337,"about_ca_system_score_gemma":0.00003592672,"threshold_uncertainty_score":0.66910076},"labels":[],"label_agreement":null},{"id":"W2396211122","doi":"10.1007/978-1-60761-854-6_20","title":"Annotating the Regulatory Genome","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Biology; Genome; Function (biology); Context (archaeology); Gene; Computational biology; Regulatory sequence; Genetics; Regulation of gene expression","score_opus":0.054161220254314066,"score_gpt":0.46008746885436047,"score_spread":0.4059262486000464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396211122","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000027375389,0.8675223,0.13092208,0.000055355224,0.00053929666,0.00036553145,0.000021521999,0.000023406401,0.0005231097],"genre_scores_gemma":[8.9952965e-7,0.66480106,0.3341459,0.00022929284,0.00024248629,0.00014793867,0.00019129441,0.000052679206,0.00018844978],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950393,0.002721805,0.0007174634,0.000860309,0.00009461489,0.0005665064],"domain_scores_gemma":[0.99803656,0.0003017267,0.00035188306,0.0011818532,0.00004402244,0.000083959174],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0027203907,0.0004941696,0.001168313,0.00016022683,0.00009535716,0.00002246454,0.0010686478,0.0018849954,0.000020234686],"category_scores_gemma":[0.0016083195,0.00031508054,0.00050812657,0.0003182374,0.0007607701,7.3389646e-7,0.0005433084,0.0011734681,0.000013008639],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000034791317,0.000018364017,0.000004749659,0.0003597879,0.00007828114,0.000014102101,0.0000143828165,5.078473e-7,0.029775597,0.00031085286,0.000046120193,0.96937376],"study_design_scores_gemma":[0.00011993693,0.00012085284,0.000006669131,0.00024233907,0.00010634687,0.00009600433,0.000015164845,0.0000022600077,0.0007172164,0.00057957415,0.9976186,0.00037500233],"about_ca_topic_score_codex":0.0000093999215,"about_ca_topic_score_gemma":0.00001092759,"teacher_disagreement_score":0.99757254,"about_ca_system_score_codex":0.000024877592,"about_ca_system_score_gemma":0.00025275958,"threshold_uncertainty_score":0.99993014},"labels":[],"label_agreement":null},{"id":"W2396307949","doi":"10.1007/978-1-4939-1096-0_13","title":"A Cost-Effective Method for Preparing, Maintaining, and Transfecting Neurons in Organotypic Slices","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; University of Ottawa","funders":"","keywords":"Neuroscience; Transfection; Brain function; Electrophysiology; Function (biology); Biology; Computer science; Cell biology; Cell culture","score_opus":0.06630759630104743,"score_gpt":0.49592157220308114,"score_spread":0.4296139759020337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396307949","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32370794,0.000028639344,0.6737872,0.00023483025,0.00020651311,0.0016616043,0.0000029550977,0.00003680356,0.00033356695],"genre_scores_gemma":[0.60956466,0.000066665925,0.3838323,0.004480177,0.000045964396,0.001895011,6.867504e-7,0.000060013546,0.00005452205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98971844,0.008049668,0.00031716272,0.0011018721,0.00008671129,0.00072616845],"domain_scores_gemma":[0.992904,0.0066502127,0.000077780605,0.00024472375,0.000022604188,0.000100665464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042798026,0.00021708077,0.00040406495,0.00046568213,0.0001383911,0.000033403354,0.00040173347,0.0001543073,0.000008107785],"category_scores_gemma":[0.0076885764,0.00020481806,0.00006676413,0.00069838035,0.00035107063,0.00007362777,0.0001904981,0.00054928113,0.0000018604273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013062003,0.00005323893,0.0021235894,0.000019769748,0.000001972091,0.000023599228,0.00023443841,0.00010353708,0.9095058,0.0040357397,0.0000019301594,0.08376578],"study_design_scores_gemma":[0.0012102107,0.0008374997,0.0008344498,0.000010563214,0.0000092824475,0.000065456086,0.00002230657,0.022092195,0.96451235,0.0070300777,0.0031885142,0.00018711464],"about_ca_topic_score_codex":0.000028858176,"about_ca_topic_score_gemma":0.000031591895,"teacher_disagreement_score":0.28995487,"about_ca_system_score_codex":0.000034156204,"about_ca_system_score_gemma":0.000039695107,"threshold_uncertainty_score":0.9204499},"labels":[],"label_agreement":null},{"id":"W2396419952","doi":"10.1007/978-1-60761-700-6_7","title":"Fluorescence Studies of Drug Binding and Translocation by Membrane Transporters","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"P-glycoprotein; ATP-binding cassette transporter; Efflux; Transporter; ABCC1; Drug; Multiple drug resistance; Chemistry; Fluorescence; Glycoprotein; Pharmacology; Biochemistry; Abcg2; Chromosomal translocation; Biology; Gene","score_opus":0.019067055491912302,"score_gpt":0.37698737781252445,"score_spread":0.35792032232061216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396419952","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77635306,0.0020804184,0.22045892,0.00054328254,0.00023101007,0.00023099445,0.000008088491,0.000017365572,0.00007684869],"genre_scores_gemma":[0.45322904,0.00071114016,0.5458743,0.00007285818,0.000008968272,0.000015279475,0.000022658349,0.000012421953,0.000053315118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990332,0.00013994564,0.00031709063,0.000261842,0.000068186666,0.00017972906],"domain_scores_gemma":[0.9995899,0.00008311307,0.00006269933,0.00016957016,0.00004207069,0.000052642772],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009917595,0.00012607829,0.0004209638,0.00013877342,0.00002313072,0.0000015085044,0.0000718723,0.00012910199,0.000012672008],"category_scores_gemma":[0.000060805738,0.00010157607,0.000060101847,0.00018299116,0.0003082335,0.000017778184,0.000005059544,0.00023497763,2.6978552e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007008311,0.000043841148,0.002852952,0.00015284837,0.000048962367,0.00001694076,0.0008070044,5.137881e-7,0.9746788,0.0013189341,0.0000028214079,0.02000626],"study_design_scores_gemma":[0.0008471532,0.00006943161,0.00061325583,0.00007693388,0.000062757776,0.000010743326,0.00036721435,0.00003245732,0.9964742,0.0010361278,0.0003111484,0.00009855722],"about_ca_topic_score_codex":0.000019852014,"about_ca_topic_score_gemma":0.000040357263,"teacher_disagreement_score":0.3254154,"about_ca_system_score_codex":0.000007657475,"about_ca_system_score_gemma":0.00002459279,"threshold_uncertainty_score":0.41421518},"labels":[],"label_agreement":null},{"id":"W2396421653","doi":"10.1007/978-1-4939-3052-4_3","title":"SRYTH: A New Yeast Two-Hybrid Method","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; McGill University; Concordia University","funders":"","keywords":"Yeast; Protein–protein interaction; Two-hybrid screening; Saccharomyces cerevisiae; Computational biology; Candida albicans; Biology; Function (biology); Cytoplasm; Transcription factor; Protein function; Cell biology; Genetics; Gene","score_opus":0.028058947740101276,"score_gpt":0.3889480403902764,"score_spread":0.36088909265017516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396421653","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0048967446,0.0018373929,0.9864425,0.00022452719,0.00051650987,0.00022153884,0.000011963501,0.000018611398,0.0058302255],"genre_scores_gemma":[0.010508265,0.000028859324,0.98675996,0.0015428076,0.00031179553,0.000022615222,0.0001302109,0.000037414422,0.0006580679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769926,0.0008324056,0.00043647952,0.0004706149,0.00006985854,0.0004913562],"domain_scores_gemma":[0.99888825,0.000034017365,0.0001300872,0.00060945004,0.00006815188,0.0002700509],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019745138,0.00026181736,0.0003465793,0.00011581818,0.000028664352,0.000023387944,0.0004089418,0.0002603067,0.00002447598],"category_scores_gemma":[0.00032957393,0.00024767817,0.00013779053,0.00018527308,0.00009193313,0.0000032066755,0.00033032405,0.00024469756,0.00002495982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012201322,0.000050747498,0.00045124133,0.000009165561,0.00009331224,0.00002385457,0.000119655226,0.0014136359,0.7513213,0.00814328,0.003592877,0.23465893],"study_design_scores_gemma":[0.0043701604,0.0009937385,0.00006616665,0.00002393296,0.000056773093,0.00034788257,0.00015918896,0.0075026588,0.47622153,0.16308726,0.34614518,0.0010255035],"about_ca_topic_score_codex":0.00012760339,"about_ca_topic_score_gemma":0.00003625362,"teacher_disagreement_score":0.3425523,"about_ca_system_score_codex":0.00003211748,"about_ca_system_score_gemma":0.00023798853,"threshold_uncertainty_score":0.99999756},"labels":[],"label_agreement":null},{"id":"W2396474450","doi":"10.1007/978-1-59745-000-3_22","title":"Studying the Mechanosensitivity of Voltage-Gated Channels Using Oocyte Patches","year":2006,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Oocyte; Chemistry; Biophysics; Biology; Cell biology","score_opus":0.09203776541751026,"score_gpt":0.4258468183122466,"score_spread":0.33380905289473634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396474450","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024718267,0.48139656,0.5170256,0.000006341174,0.000749807,0.00048963766,0.00002000108,0.00000887104,0.000055993863],"genre_scores_gemma":[0.00061402924,0.8920389,0.105108276,0.0001305748,0.0007484256,0.000100876874,0.0008431695,0.0001477503,0.00026798787],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949221,0.0030820493,0.0008135452,0.0006835622,0.00011390792,0.00038483867],"domain_scores_gemma":[0.998439,0.00016230822,0.0005910989,0.0006336378,0.00013250097,0.00004145158],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002164354,0.00046421826,0.0012195944,0.0002695328,0.00008420887,0.000015205644,0.00032799074,0.00091972016,0.000007181018],"category_scores_gemma":[0.0004087223,0.00033903716,0.0005242597,0.0004954597,0.00021364006,0.0000024496885,0.00029970324,0.0003466991,0.0000015994002],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048599013,0.0001106728,0.000011939269,0.0012440031,0.00032627414,0.00001577016,0.00004226219,0.00068217743,0.2756361,0.00033802685,0.00005165397,0.7214925],"study_design_scores_gemma":[0.00052968925,0.00027514942,0.00000363299,0.00096378464,0.000485968,0.00009567934,0.000076191594,0.00142361,0.12802078,0.0007801188,0.86654276,0.0008026648],"about_ca_topic_score_codex":0.00010565321,"about_ca_topic_score_gemma":0.000009332283,"teacher_disagreement_score":0.8664911,"about_ca_system_score_codex":0.00005491954,"about_ca_system_score_gemma":0.00016189704,"threshold_uncertainty_score":0.9999062},"labels":[],"label_agreement":null},{"id":"W2396480108","doi":"10.1007/978-1-61779-037-9_10","title":"Detection of Viral microRNA with S1 Nuclease Protection Assay","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Centre National de la Recherche Scientifique; International Business Machines Corporation","keywords":"Nuclease; RNA; Oligonucleotide; DNA; Biology; Nuclease protection assay; Molecular biology; RNA extraction; Nucleic acid; Non-coding RNA; Biochemistry; Gene","score_opus":0.024052260119179658,"score_gpt":0.31601825080587664,"score_spread":0.291965990686697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396480108","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45254222,0.00013591432,0.54661447,0.000007188807,0.00007474215,0.0001357769,0.0000027673743,0.0000055796036,0.00048134784],"genre_scores_gemma":[0.7827199,0.0000254777,0.21701163,0.00009523122,0.00002731765,0.000042606156,0.000015264115,0.000017607475,0.000044956727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852544,0.0006361275,0.00023752479,0.00035357176,0.000040979536,0.00020632835],"domain_scores_gemma":[0.9994368,0.000008062842,0.00012248405,0.0003132082,0.00008228652,0.000037190635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004756597,0.00014878102,0.0001867449,0.000114996874,0.000023329374,0.0000034683765,0.00016607331,0.00024696678,0.000027804248],"category_scores_gemma":[0.000117973126,0.00012786286,0.00007818726,0.00012530269,0.00013967598,0.0000031635302,0.000070413254,0.00013224836,0.0000068596005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039617962,0.000064643355,0.0009449271,0.000010884756,0.000045587036,0.0000064506116,0.000053234482,0.000006871062,0.9686781,0.00007601035,0.000003576048,0.029713493],"study_design_scores_gemma":[0.00038309448,0.0014328642,0.0007621118,0.000011770666,0.000016399927,0.000029743826,0.00004404899,0.000058605696,0.99538463,0.000725792,0.0009950157,0.00015591303],"about_ca_topic_score_codex":0.00019236215,"about_ca_topic_score_gemma":0.00006200729,"teacher_disagreement_score":0.3301777,"about_ca_system_score_codex":0.000012566678,"about_ca_system_score_gemma":0.000032789478,"threshold_uncertainty_score":0.52140963},"labels":[],"label_agreement":null},{"id":"W2396555174","doi":"10.1007/978-1-62703-751-8_16","title":"Molecular Targeted Viral Nanoparticles as Tools for Imaging Cancer","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Prostate Cancer Canada; University of Alberta","funders":"National Center for Advancing Translational Sciences; National Institute of Biomedical Imaging and Bioengineering","keywords":"Polyethylene glycol; PEG ratio; Cowpea mosaic virus; Molecular imaging; Chemistry; Fluorescence-lifetime imaging microscopy; In vivo; Preclinical imaging; Biophysics; Nanoparticle; Nanotechnology; Fluorescence; Biochemistry; Virus; Biology; Plant virus; Virology; Materials science; Biotechnology","score_opus":0.015443540439087168,"score_gpt":0.3736427278202064,"score_spread":0.3581991873811192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396555174","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66264224,0.00022322248,0.3348798,0.00078935793,0.00024141959,0.0004064599,0.0000086296495,0.000023416094,0.0007854872],"genre_scores_gemma":[0.38761237,0.000015872172,0.60918516,0.0024772661,0.000019071627,0.00048319247,0.00001388659,0.00002447928,0.00016872441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873143,0.0003102367,0.0002215172,0.00033544237,0.000033418462,0.00036797088],"domain_scores_gemma":[0.9995682,0.000103003054,0.000060619586,0.0001954924,0.000013257012,0.000059427086],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00026277275,0.00013510868,0.00017134043,0.00004038496,0.000053478645,0.00004833026,0.00019122638,0.000075325224,0.0021769302],"category_scores_gemma":[0.00020282317,0.0001244416,0.0000894939,0.00012438883,0.00013896977,0.00016054424,0.0001478678,0.00011106979,0.0001232462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000070742044,0.00002555729,0.00049927726,0.0000022055665,0.000009410934,0.000004952022,0.00004305074,0.00013603106,0.89610785,0.00030898995,0.00008506871,0.10277054],"study_design_scores_gemma":[0.00023764827,0.0000446712,0.0032317825,0.000005866721,0.000011078951,0.0000086223845,0.00003370439,0.0007376846,0.97614944,0.0063015423,0.013074475,0.00016345664],"about_ca_topic_score_codex":0.002090874,"about_ca_topic_score_gemma":0.000041283183,"teacher_disagreement_score":0.27502987,"about_ca_system_score_codex":0.000091153895,"about_ca_system_score_gemma":0.000010100247,"threshold_uncertainty_score":0.9987352},"labels":[],"label_agreement":null},{"id":"W2396621679","doi":"10.1007/978-1-4939-0956-8_19","title":"Pharmacogenomics in Children","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Pharmaceutical studies and practices","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Western Ontario; Western University","funders":"","keywords":"Pharmacogenomics; Medicine; Pharmacology","score_opus":0.14239373230926225,"score_gpt":0.5878499955207258,"score_spread":0.4454562632114636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396621679","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010592413,0.9625307,0.034207385,0.00011653754,0.0002138163,0.00083282084,0.0000094847055,0.000015374366,0.0020632865],"genre_scores_gemma":[6.3162514e-7,0.80923164,0.18960774,0.00083805516,0.00011461015,0.00009013552,0.000055836234,0.000034718567,0.000026652335],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952922,0.0030601209,0.0006675059,0.0005110017,0.00005467649,0.00041452295],"domain_scores_gemma":[0.9986157,0.00076387625,0.00021458186,0.00029217504,0.00001618024,0.000097488795],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0023973477,0.00034036126,0.0022372296,0.00027067706,0.000019035788,0.0000060155394,0.00022612666,0.00045896272,0.000097401564],"category_scores_gemma":[0.00076787005,0.00025784652,0.0003348129,0.00037556366,0.00010733126,0.000009834124,0.00022003546,0.0010857105,0.00003704421],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016470165,0.00006308423,0.0004101652,0.0014754919,0.000266262,0.000045695168,0.0000055362398,2.811997e-7,0.00020375437,0.00026741216,0.000018277515,0.99722755],"study_design_scores_gemma":[0.0005945971,0.00007693439,0.000021573684,0.0007823477,0.0007337175,0.00017413107,0.0000010913915,0.000013835641,0.00007842511,0.0003427049,0.99694616,0.00023450812],"about_ca_topic_score_codex":0.00003977105,"about_ca_topic_score_gemma":0.0000019121546,"teacher_disagreement_score":0.99699306,"about_ca_system_score_codex":0.000118396354,"about_ca_system_score_gemma":0.0000903347,"threshold_uncertainty_score":0.99998736},"labels":[],"label_agreement":null},{"id":"W2396706077","doi":"10.1007/978-1-4939-1776-1_5","title":"Matrix-Assisted Laser Desorption/Ionization Time of Flight Mass Spectrometry (MALDI-TOF/MS)-Based Identification of Pathogens from Positive Blood Culture Bottles","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Microbiology; Bacteria; Blood culture; Matrix-assisted laser desorption/ionization; Chromatography; Chemistry; Biology; Antibiotics; Desorption","score_opus":0.009051165429782147,"score_gpt":0.3124183948383242,"score_spread":0.30336722940854205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396706077","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50044966,0.00013003963,0.49899226,0.0000387555,0.00008336412,0.00014661823,0.00010205587,0.0000105348845,0.00004674171],"genre_scores_gemma":[0.5909089,0.000014391713,0.40747327,0.000053318683,0.000050106883,0.000014051398,0.0013914497,0.000019302199,0.00007522446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99667424,0.0017576587,0.00072858616,0.0005424216,0.000100699566,0.00019639418],"domain_scores_gemma":[0.99846905,0.00011997787,0.0004932998,0.00056059594,0.0003064922,0.000050565544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012089857,0.00019346454,0.00035594558,0.00017869307,0.000042995427,0.000018063534,0.00025655088,0.00039101276,0.00007474924],"category_scores_gemma":[0.0014404107,0.00019456557,0.00015039874,0.000405721,0.00015751012,0.0000061767473,0.000060425555,0.000109025554,0.0000063526086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006413832,0.0001607488,0.005823956,0.00002715877,0.00006321067,8.756356e-7,0.000045951976,0.00011277328,0.99252236,0.0002878662,0.0000088279985,0.0008821376],"study_design_scores_gemma":[0.00060923846,0.00019094431,0.021478659,0.000024321795,0.000081943675,0.0000022224922,0.000023158342,0.0012192288,0.9749271,0.0011812379,0.00008198739,0.00017995838],"about_ca_topic_score_codex":0.00003482263,"about_ca_topic_score_gemma":0.0000121338935,"teacher_disagreement_score":0.091518976,"about_ca_system_score_codex":0.000021600306,"about_ca_system_score_gemma":0.000050340957,"threshold_uncertainty_score":0.79341537},"labels":[],"label_agreement":null},{"id":"W2396709498","doi":"10.1007/978-1-62703-514-9_12","title":"Statistical Analysis of ChIP-seq Data with MOSAiCS","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Human Genome Research Institute; National Institutes of Health","keywords":"Bioconductor; Preprocessor; Chromatin immunoprecipitation; Epigenomics; Computer science; Chip; Computational biology; R package; Protocol (science); Data mining; Biology; Artificial intelligence; Genetics; Gene; DNA methylation; Medicine","score_opus":0.016856116843866835,"score_gpt":0.3634612087268056,"score_spread":0.34660509188293875,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396709498","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33989754,0.00019400366,0.6592157,0.0000408585,0.000030247247,0.00012547329,0.00013177758,0.0000033764015,0.00036101224],"genre_scores_gemma":[0.22659792,0.000053783795,0.7714936,0.00014905809,0.00001308964,0.000019721523,0.0016274058,0.000018200186,0.000027225664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833786,0.0004526314,0.00035016757,0.00052494585,0.0000651573,0.0002692306],"domain_scores_gemma":[0.9985524,0.000066073546,0.00013055158,0.0011113787,0.00007601026,0.00006360774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058131275,0.00016649318,0.00038762204,0.000159165,0.000019205952,0.000011288814,0.0005620331,0.000201603,0.00006856122],"category_scores_gemma":[0.00023189132,0.0001398994,0.000060171635,0.0003897612,0.0002021605,0.0000023392856,0.00039887204,0.00011215804,0.0000021985268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000232532,0.00007238741,0.024907796,0.000012523523,0.0006468199,0.0000041748913,0.000016755755,0.0010926153,0.9633153,0.0027624879,0.000049149556,0.0070967004],"study_design_scores_gemma":[0.0036074037,0.0029288288,0.18925679,0.000038054564,0.0027441808,0.000054730182,0.00045680342,0.27678093,0.49026155,0.021513706,0.009986585,0.0023704125],"about_ca_topic_score_codex":0.00017003756,"about_ca_topic_score_gemma":0.00011564694,"teacher_disagreement_score":0.47305378,"about_ca_system_score_codex":0.000010074535,"about_ca_system_score_gemma":0.00006219996,"threshold_uncertainty_score":0.5704932},"labels":[],"label_agreement":null},{"id":"W2396713134","doi":"10.1007/978-1-62703-574-3_11","title":"Enumerating Stem Cell Frequency: Neural Colony Forming Cell Assay","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"National Science Council","keywords":"Neurosphere; Neural stem cell; Progenitor cell; Biology; In vitro; Stem cell; Cell culture; Molecular biology; Cell biology; Adult stem cell; Endothelial stem cell; Biochemistry; Genetics","score_opus":0.038958014723557303,"score_gpt":0.33993217475585724,"score_spread":0.30097416003229993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396713134","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56451696,0.00011401937,0.43235946,0.00008499432,0.00063143694,0.00040574942,0.0000047608282,0.00006756317,0.0018150377],"genre_scores_gemma":[0.6893676,0.000021429329,0.3076953,0.0025131006,0.000037376714,0.00012507437,0.0000014708573,0.000056301516,0.00018233781],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.993944,0.0038987587,0.0004934685,0.000825963,0.00014331377,0.00069452205],"domain_scores_gemma":[0.99785227,0.0013831307,0.00019793928,0.00040386186,0.00003780539,0.0001249721],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082965114,0.00029914425,0.00038508544,0.00019592622,0.00014852271,0.00006542661,0.0004913899,0.00019580279,0.000103193226],"category_scores_gemma":[0.0004887531,0.00027568493,0.000121197634,0.0004015295,0.00010286432,0.00010667315,0.00024062674,0.0004256633,0.00008280477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000042685947,0.000059248472,0.00024200672,0.00001788116,0.0000011068912,0.00010361314,0.00006173296,0.00006899478,0.98992085,0.0021294628,0.000008654847,0.0073821456],"study_design_scores_gemma":[0.00030963655,0.000261835,0.000033237728,0.0000054633606,0.00000807495,0.000041548556,0.00002405539,0.006424043,0.99031353,0.0020675575,0.00025051506,0.0002604785],"about_ca_topic_score_codex":0.00004485599,"about_ca_topic_score_gemma":0.0000027572105,"teacher_disagreement_score":0.124850646,"about_ca_system_score_codex":0.0000344967,"about_ca_system_score_gemma":0.00003965406,"threshold_uncertainty_score":0.99996954},"labels":[],"label_agreement":null},{"id":"W2396970693","doi":"10.1007/978-1-4939-1357-2_7","title":"DESI Imaging of Small Molecules in Biological Tissues","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Desorption electrospray ionization; Ionization; Mass spectrometry; Sprayer; Materials science; Analytical Chemistry (journal); Molecule; Molecular imprinting; Image resolution; Chemistry; Nanotechnology; Chemical ionization; Optics; Chromatography; Physics; Organic chemistry","score_opus":0.0310645632841638,"score_gpt":0.3898930605377762,"score_spread":0.35882849725361243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2396970693","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06983,0.00044843624,0.9084563,0.00016253535,0.000011982429,0.00006763122,0.000003107854,0.000050623385,0.020969355],"genre_scores_gemma":[0.2923071,0.00004089745,0.7074871,0.00006787673,0.000010397411,0.000052219762,0.000011036367,0.000009465166,0.000013897548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99869174,0.00036360938,0.00033841003,0.00032716035,0.000031215244,0.0002478606],"domain_scores_gemma":[0.99926186,0.00024625487,0.00009416091,0.00034596288,0.000021120646,0.000030661187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007763162,0.00013000147,0.00030770685,0.0001592152,0.000012655259,0.0000045655856,0.00030247576,0.00017057078,0.00045115003],"category_scores_gemma":[0.00041200483,0.00011742804,0.00006404813,0.00025591988,0.0001408792,0.000006700611,0.00012211585,0.0002000477,0.0000012433848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004950952,0.00005137094,0.051181346,0.000015435206,0.0000036703057,0.00000416707,0.000013777768,0.000008550794,0.82962215,0.083336286,0.0000016397003,0.03575668],"study_design_scores_gemma":[0.00017254648,0.00002926361,0.0012280841,0.000014685724,0.000003503724,0.000006136642,0.000017452667,0.0017625901,0.85981804,0.13259932,0.0042133173,0.00013503649],"about_ca_topic_score_codex":0.00013802797,"about_ca_topic_score_gemma":0.000011008847,"teacher_disagreement_score":0.22247711,"about_ca_system_score_codex":0.000028094086,"about_ca_system_score_gemma":0.000008911623,"threshold_uncertainty_score":0.49397764},"labels":[],"label_agreement":null},{"id":"W2397046216","doi":"10.1007/978-1-59745-558-9_3","title":"Application of Fluorescent Measurements for Characterization of Riboswitch–Ligand Interactions","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Riboswitch; Aptamer; Biophysics; RNA splicing; Biology; Transcription (linguistics); RNA; Chemistry; Ligand (biochemistry); Computational biology; Cell biology; Reporter gene; Gene expression; Biochemistry; Genetics; Gene; Non-coding RNA","score_opus":0.029924190272054122,"score_gpt":0.3772925594859283,"score_spread":0.3473683692138742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397046216","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17396976,0.000105336134,0.8252953,0.0000793228,0.00007829366,0.00039908674,0.000013681868,0.0000030579604,0.000056151304],"genre_scores_gemma":[0.5840102,0.000027510523,0.41561618,0.00008044206,0.00002823262,0.0000773451,0.0001398514,0.000009143507,0.0000111176405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989743,0.00027524264,0.00033518998,0.0002377781,0.00004778331,0.0001297059],"domain_scores_gemma":[0.9993686,0.000020251646,0.00021026701,0.00026180598,0.00011617025,0.000022914195],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066569576,0.00010057702,0.00020313654,0.000086209366,0.000016692067,0.0000021847268,0.00014183609,0.00013592755,0.000002455502],"category_scores_gemma":[0.00020948179,0.00009857169,0.00008647416,0.00009604828,0.000033724653,0.0000022148981,0.000022896207,0.000035630994,2.655229e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001113913,0.00008476989,0.00046981967,0.000015522253,0.000021645816,6.3459645e-8,0.000015922013,0.000009056594,0.92397714,0.0009337096,0.0000012528977,0.07435973],"study_design_scores_gemma":[0.00033896675,0.00027242428,0.0010796956,0.000014274004,0.00001529242,0.0000013733537,0.000005597635,0.0001065122,0.9937191,0.0031947973,0.0011657352,0.00008622949],"about_ca_topic_score_codex":0.0000053959375,"about_ca_topic_score_gemma":0.0000020502248,"teacher_disagreement_score":0.4100404,"about_ca_system_score_codex":0.000009706218,"about_ca_system_score_gemma":0.000022165303,"threshold_uncertainty_score":0.4019637},"labels":[],"label_agreement":null},{"id":"W2397084231","doi":"10.1007/978-1-4939-1047-2_5","title":"Synthesis of Aliphatic Polyester Hydrogel for Cardiac Tissue Engineering","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"MaRS; University of Toronto; Discovery Centre; University Health Network","funders":"","keywords":"Self-healing hydrogels; Tissue engineering; Regeneration (biology); Biomedical engineering; Biocompatible material; Chemistry; Materials science; Medicine; Cell biology; Polymer chemistry; Biology","score_opus":0.014212951759994577,"score_gpt":0.3645009297770708,"score_spread":0.35028797801707623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397084231","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.047445565,0.0033959092,0.9480959,0.00027356838,0.0003938148,0.00028252834,0.000004150977,0.00002787752,0.00008064262],"genre_scores_gemma":[0.16547087,0.000013667599,0.83399385,0.000043410975,0.00014017367,0.00010277665,0.000009185671,0.000031006562,0.00019507596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990481,0.00019581587,0.00027109034,0.00021234225,0.000052175255,0.00022044902],"domain_scores_gemma":[0.99899954,0.0005980346,0.00004622038,0.00025557354,0.000036059868,0.000064567525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010145206,0.00014181949,0.0005935283,0.00019620327,0.0000083073,0.0000012883274,0.00006798061,0.0001354464,0.000008302931],"category_scores_gemma":[0.0017999344,0.00011378459,0.00009345366,0.00014274704,0.00006023631,0.000006344918,0.000021033631,0.00010137675,0.0000011105283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012858965,0.00002106253,0.0005057943,0.00017281558,0.000070164766,0.0000031557927,0.00005151816,0.00034098656,0.96025586,0.0051812865,0.000010795346,0.033373687],"study_design_scores_gemma":[0.00043161347,0.0003111753,0.00027028949,0.000113407856,0.00009575903,0.000011794484,0.00000828016,0.0060476,0.97922176,0.00020635258,0.013172514,0.00010944593],"about_ca_topic_score_codex":0.000012212282,"about_ca_topic_score_gemma":1.8942852e-7,"teacher_disagreement_score":0.1180253,"about_ca_system_score_codex":0.000021434002,"about_ca_system_score_gemma":0.000015058184,"threshold_uncertainty_score":0.4640001},"labels":[],"label_agreement":null},{"id":"W2397100071","doi":"10.1007/978-1-4939-1752-5_1","title":"Introduction to Membrane Lipids","year":2014,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Membrane; Biological membrane; Bilayer; Peripheral membrane protein; Lipid bilayer; Membrane lipids; Membrane protein; Chemistry; Elasticity of cell membranes; Biophysics; Integral membrane protein; Biochemistry; Biology","score_opus":0.013324852447166946,"score_gpt":0.3350208227896142,"score_spread":0.32169597034244723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397100071","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015702806,0.0007427988,0.87565213,0.0018262765,0.0048726415,0.0011701472,0.000063058935,0.00006789678,0.11403478],"genre_scores_gemma":[0.00067759113,0.00029833472,0.6597608,0.0034639162,0.009598616,0.00012511895,0.0012530517,0.0002932008,0.32452938],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971468,0.00040516772,0.0005637849,0.0012881901,0.000121947356,0.0004741475],"domain_scores_gemma":[0.9983375,0.000031871554,0.00018275162,0.0011688189,0.00011594079,0.00016309599],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00094498176,0.000573704,0.000728034,0.0003321783,0.000043623917,0.000017527187,0.00048107404,0.0013571143,0.00036990363],"category_scores_gemma":[0.00031495525,0.00055383594,0.00028925805,0.00007531064,0.00016621384,0.0000013034177,0.0003306033,0.0004946817,0.00007668027],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007710377,0.0000107769965,0.000011245688,0.000034025565,0.00006487278,0.000008121945,0.0000103612565,0.0000273664,0.94425184,0.015860885,0.0014721041,0.038171295],"study_design_scores_gemma":[0.00020885406,0.00029302016,0.0000049890823,0.000013556067,0.000048325343,0.000031351243,0.0000012579366,0.000001151202,0.46312734,0.0010873653,0.53481764,0.0003651658],"about_ca_topic_score_codex":0.0000105343315,"about_ca_topic_score_gemma":0.000023019473,"teacher_disagreement_score":0.5333455,"about_ca_system_score_codex":0.000043697903,"about_ca_system_score_gemma":0.00008367719,"threshold_uncertainty_score":0.9999393},"labels":[],"label_agreement":null},{"id":"W2397137403","doi":"10.1007/978-1-60327-136-3_12","title":"Phylogenomic Analysis of EST Datasets","year":2009,"lang":"fr","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Ontario Ministry of Research and Innovation; Canadian Institutes of Health Research","keywords":"Phylogenomics; Phylogenetic tree; Biology; Context (archaeology); Taxon; Evolutionary biology; Phylogenetics; Identification (biology); Similarity (geometry); Sequence (biology); Phylogenetic network; Genome; Computational biology; Computer science; Clade; Genetics; Gene; Artificial intelligence; Ecology; Paleontology","score_opus":0.02002706829307888,"score_gpt":0.3770928127125363,"score_spread":0.35706574441945743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397137403","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38503247,0.14381172,0.464998,0.0010687024,0.0008659776,0.00040926624,0.001423778,0.000003864991,0.0023862224],"genre_scores_gemma":[0.41767824,0.004887888,0.57529986,0.0009247373,0.00012267524,0.000015375434,0.0008443379,0.00002876985,0.0001980897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996385,0.0013110881,0.0007712755,0.0008448464,0.00007274302,0.0006150762],"domain_scores_gemma":[0.99843144,0.00009319632,0.00029486723,0.0009863657,0.00008633397,0.000107798216],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012947008,0.00038901196,0.00096005725,0.0004491215,0.000046123652,0.000011178689,0.0005410541,0.00057980284,0.00005694827],"category_scores_gemma":[0.0003070967,0.0004237396,0.00046582657,0.00092207134,0.0004243113,8.908699e-7,0.00027351503,0.00020587328,0.0000038996673],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006128975,0.00021878918,0.0046170414,0.000019324178,0.0016062866,0.000016230448,0.00008115473,0.001713594,0.9068648,0.005578533,0.000078197045,0.07914476],"study_design_scores_gemma":[0.0012549406,0.0018483908,0.0376732,0.000029306182,0.0026178465,0.000022804988,0.00011980134,0.0013822883,0.81852657,0.010213648,0.12533623,0.0009749834],"about_ca_topic_score_codex":0.00016808149,"about_ca_topic_score_gemma":0.00010485541,"teacher_disagreement_score":0.13892382,"about_ca_system_score_codex":0.000039107257,"about_ca_system_score_gemma":0.00010730725,"threshold_uncertainty_score":0.9998214},"labels":[],"label_agreement":null},{"id":"W2397149926","doi":"10.1007/978-1-4939-0709-0_5","title":"Biological Information Extraction and Co-occurrence Analysis","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Biomedical Text Mining and Ontologies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Computer science; Inference; Data science; Field (mathematics); Representation (politics); String (physics); Information extraction; Information retrieval; Data mining; Artificial intelligence; Mathematics","score_opus":0.06840891714613861,"score_gpt":0.5014912274252321,"score_spread":0.4330823102790935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397149926","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022081422,0.5198104,0.4796822,0.000008659439,0.00011456421,0.00015256452,0.00006652239,0.00001460559,0.00012841012],"genre_scores_gemma":[0.000010127189,0.7743151,0.22291747,0.00012087779,0.000048814,0.00008718365,0.002481752,0.000008389316,0.000010275763],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99600345,0.002236194,0.0007307898,0.0006063476,0.00006939197,0.00035382586],"domain_scores_gemma":[0.9987504,0.000267102,0.00038928984,0.00045838268,0.000040619227,0.00009422825],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018535615,0.00038723534,0.0014123125,0.0005089637,0.000047376772,0.000027754058,0.0003259919,0.0015080321,0.000015452928],"category_scores_gemma":[0.0015326027,0.00029291562,0.00040707673,0.00052726455,0.00039625372,0.0000031065226,0.00019339635,0.00042243977,0.00000970034],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008285706,0.000016986867,0.00011386033,0.0004250142,0.00028526768,0.0000025896336,0.0000073575284,0.0000011864231,0.0007241086,0.00012710212,0.00006984576,0.9982184],"study_design_scores_gemma":[0.00013800315,0.00023212162,0.000030821546,0.00012701131,0.0004056175,0.000034996057,0.000008574177,0.000024378784,0.0002470045,0.00016961459,0.9982419,0.00033997517],"about_ca_topic_score_codex":0.000011089851,"about_ca_topic_score_gemma":0.0000037221023,"teacher_disagreement_score":0.99817204,"about_ca_system_score_codex":0.000023217584,"about_ca_system_score_gemma":0.00007698127,"threshold_uncertainty_score":0.9999523},"labels":[],"label_agreement":null},{"id":"W2397184954","doi":"10.1007/978-1-4939-1438-8_20","title":"Screening Leishmania donovani Complex-Specific Genes Required for Visceral Disease","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Leishmania donovani; Visceral leishmaniasis; Biology; Leishmania infantum; Gene; Leishmaniasis; Leishmania; Immunology; Virology; Genetics; Parasite hosting","score_opus":0.10914006925954042,"score_gpt":0.4494416349498919,"score_spread":0.3403015656903515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397184954","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018962415,0.0025860316,0.9736819,0.0026662836,0.00018328568,0.00094089576,0.00001594099,0.00007697584,0.0008862168],"genre_scores_gemma":[0.03079203,0.00020990754,0.9669859,0.0011227019,0.000259953,0.00027306145,0.00009392871,0.000060411432,0.0002021124],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99662447,0.0013324274,0.00048131827,0.0006959563,0.00016515591,0.00070067344],"domain_scores_gemma":[0.998203,0.00065685314,0.0001013697,0.0006350782,0.00017306008,0.00023065959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023970597,0.00026849276,0.00071056356,0.00031563104,0.00012896536,0.00002511844,0.00027358698,0.00014596712,0.00006372771],"category_scores_gemma":[0.0017952725,0.00023550393,0.00022964785,0.00029286466,0.00035350095,0.00003563158,0.00024040489,0.00024153189,0.000009316915],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079824525,0.00011691162,0.019637028,0.00011582622,0.00012962792,0.00005529598,0.000053782882,0.000027715165,0.7613384,0.017771756,0.0006960569,0.19925933],"study_design_scores_gemma":[0.010450912,0.0023016324,0.13980183,0.00021009802,0.00018818039,0.000066611356,0.00018846075,0.015304489,0.089352325,0.03854632,0.7024663,0.0011228566],"about_ca_topic_score_codex":0.000030379244,"about_ca_topic_score_gemma":0.000011732289,"teacher_disagreement_score":0.70177025,"about_ca_system_score_codex":0.000079430254,"about_ca_system_score_gemma":0.000048187707,"threshold_uncertainty_score":0.9603572},"labels":[],"label_agreement":null},{"id":"W2397191557","doi":"10.1007/978-1-4939-1164-6_7","title":"Quantitative Image Analysis of Cell Behavior and Molecular Dynamics During Tissue Morphogenesis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Segmentation; Computer science; Morphogenesis; Image segmentation; Process (computing); Artificial intelligence; Biological system; Computer vision; Pattern recognition (psychology); Biology","score_opus":0.010183592726951842,"score_gpt":0.3641412457845815,"score_spread":0.35395765305762966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397191557","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49734414,0.00035124773,0.50188404,0.000017024564,0.000051696705,0.00009850954,0.000025699903,0.0000038466183,0.00022380559],"genre_scores_gemma":[0.5415009,0.000089522284,0.45802703,0.000058553785,0.000008307359,0.000039344206,0.00018656095,0.000025847006,0.00006391925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998006,0.00074039097,0.00038951848,0.0005339082,0.000066285895,0.0002639113],"domain_scores_gemma":[0.99911726,0.00005616531,0.00017542488,0.00047567883,0.00010498865,0.000070511975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006047837,0.000210512,0.00043472953,0.00039297887,0.00004083444,0.000012156789,0.0001975678,0.00024060391,0.000029287989],"category_scores_gemma":[0.0002400012,0.00022243553,0.00018525559,0.00045144503,0.00012441198,0.0000036318852,0.00020492703,0.00012543093,0.0000012051797],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003555615,0.000088373774,0.0013194288,0.000018812836,0.00020219857,0.000010444651,0.000028206929,0.000098214245,0.99334633,0.0032674181,8.527947e-7,0.001584146],"study_design_scores_gemma":[0.000329923,0.00034400893,0.0013048282,0.0000044805192,0.0004153693,0.000008417579,0.000069503796,0.006431433,0.99024665,0.00035158184,0.00026653268,0.00022726772],"about_ca_topic_score_codex":0.00009822364,"about_ca_topic_score_gemma":0.00007831739,"teacher_disagreement_score":0.044156782,"about_ca_system_score_codex":0.000027914337,"about_ca_system_score_gemma":0.000026140306,"threshold_uncertainty_score":0.90706575},"labels":[],"label_agreement":null},{"id":"W2397390915","doi":"10.1007/978-1-59745-504-6_2","title":"The Use of Propidium Iodide to Assess Excitotoxic Neuronal Death in Primary Mixed Cortical Cultures","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Neuroprotection; Propidium iodide; Neurodegeneration; Excitotoxicity; Neuroscience; Pharmacology; Nitric oxide; Nitric oxide synthase; NMDA receptor; Medicine; Programmed cell death; Chemistry; Biology; Pathology; Apoptosis; Biochemistry; Receptor; Internal medicine","score_opus":0.4095702400297564,"score_gpt":0.5700959863799792,"score_spread":0.16052574635022276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397390915","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024918484,0.8841816,0.07306165,0.00053278514,0.0054658256,0.010954969,0.00013252381,0.00012394229,0.0006281833],"genre_scores_gemma":[0.00003853653,0.96492916,0.031885203,0.0023364702,0.00006420113,0.00046120357,0.0000034324162,0.00007643526,0.00020535011],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9778361,0.017870868,0.0012685047,0.0014324446,0.00040779996,0.0011842883],"domain_scores_gemma":[0.98872286,0.009973637,0.00030550698,0.0007412934,0.000055802415,0.00020092285],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003296339,0.0005102347,0.0015582457,0.0007912796,0.0001527425,0.00006492886,0.0017430087,0.00049055717,0.0000125772085],"category_scores_gemma":[0.010636782,0.00032934584,0.0003361918,0.0019939623,0.0010569902,0.000064932996,0.0009897995,0.0021018533,0.000017177863],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008468688,0.00016183694,0.000069995825,0.00052313204,0.000006294723,0.00066973496,0.000009328629,0.000008047041,0.6998367,0.00092495774,0.000041866533,0.29766345],"study_design_scores_gemma":[0.00028595206,0.0005535251,0.0002972083,0.00032159383,0.000048117345,0.00018909457,0.000001588177,0.00004194612,0.22527924,0.00017729348,0.77238894,0.00041549705],"about_ca_topic_score_codex":0.000009305484,"about_ca_topic_score_gemma":0.0000056657336,"teacher_disagreement_score":0.7723471,"about_ca_system_score_codex":0.00012761116,"about_ca_system_score_gemma":0.00052103994,"threshold_uncertainty_score":0.99991584},"labels":[],"label_agreement":null},{"id":"W2397576009","doi":"10.1007/978-1-61779-289-2_14","title":"Atomic Force Microscopy and High-Content Analysis: Two Innovative Technologies for Dissecting the Relationship Between Epithelial–Mesenchymal Transition-Related Morphological and Structural Alterations and Cell Mechanical Properties","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Atomic force microscopy; Mesenchymal stem cell; Nanotechnology; Microscopy; Materials science; Transition (genetics); Cell biology; Chemistry; Biophysics; Biology; Pathology; Medicine; Biochemistry","score_opus":0.06809632911927717,"score_gpt":0.3599084466908737,"score_spread":0.29181211757159653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397576009","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59222776,0.000611186,0.4066329,0.00016300866,0.000047892223,0.00027348267,0.000025896778,0.0000110342735,0.0000068514714],"genre_scores_gemma":[0.8612061,0.000040413273,0.1384576,0.00006207011,0.00001628784,0.00009557943,0.00009263869,0.000012026683,0.000017278844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984645,0.0004627455,0.0003614357,0.00046089524,0.000032167925,0.00021822927],"domain_scores_gemma":[0.9993447,0.00018599883,0.00012050235,0.00020806694,0.000109672845,0.0000310667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067944993,0.00018220987,0.00027149383,0.00014682618,0.00022885311,0.000027495718,0.00011861508,0.00026460717,0.0000030799195],"category_scores_gemma":[0.00050740276,0.0001277145,0.00007052476,0.00026860743,0.0002755472,0.000008997271,0.00013409695,0.00025128495,1.2284411e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005835959,0.000013100048,0.0072453585,0.00000872433,0.00014746447,0.0000013095408,0.00028403624,0.0000062073154,0.97755635,0.013695945,5.0298183e-7,0.0009826173],"study_design_scores_gemma":[0.0006355422,0.00037343206,0.008562151,0.000009578348,0.00018666641,0.000027475167,0.00064043456,0.0016231913,0.95681894,0.030911474,0.000015145232,0.00019596737],"about_ca_topic_score_codex":0.000075116855,"about_ca_topic_score_gemma":0.000032057404,"teacher_disagreement_score":0.26897836,"about_ca_system_score_codex":0.000011188358,"about_ca_system_score_gemma":0.000019010287,"threshold_uncertainty_score":0.5208046},"labels":[],"label_agreement":null},{"id":"W2397689946","doi":"10.1007/978-1-61779-173-4_22","title":"High-Throughput Analyses and Curation of Protein Interactions in Yeast","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; SickKids Foundation","funders":"Canadian Institutes of Health Research","keywords":"Computer science; Organism; Model organism; Yeast; Focus (optics); Computational biology; Protein–protein interaction; Saccharomyces cerevisiae; Throughput; Data science; Key (lock); Reliability (semiconductor); Biology; Genetics","score_opus":0.05511577534050327,"score_gpt":0.408204474305249,"score_spread":0.3530886989647457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397689946","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27962336,0.0004342108,0.7190549,0.000022129025,0.000068637804,0.00015177301,0.000005238363,0.000002337873,0.0006374649],"genre_scores_gemma":[0.56323856,0.000037091304,0.4365913,0.000047677975,0.000014010537,0.000020628115,0.000024762106,0.0000059895315,0.000019950523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989969,0.00029973063,0.00033396334,0.0001982833,0.000023095308,0.00014798771],"domain_scores_gemma":[0.9996106,0.0000113821425,0.00011392943,0.00020926296,0.00002945827,0.000025370891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004309801,0.000103270024,0.0001890837,0.0001141287,0.000012731572,0.0000035918254,0.000098296085,0.00012407186,0.000014954812],"category_scores_gemma":[0.00008779165,0.00009619771,0.00004018188,0.0001274614,0.00010704154,0.0000047364542,0.00010177569,0.00010822528,6.978841e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004284454,0.000041111627,0.001193005,0.000012156084,0.000024401792,0.0000015349249,0.000124711,0.00003794634,0.9785192,0.00488251,0.0000039057827,0.0151166795],"study_design_scores_gemma":[0.00051109784,0.0002223792,0.002834007,0.000025688212,0.00001271402,0.000010287244,0.00010255913,0.0005155087,0.9663915,0.028486816,0.00071572996,0.00017170295],"about_ca_topic_score_codex":0.00023248773,"about_ca_topic_score_gemma":0.000154705,"teacher_disagreement_score":0.28361523,"about_ca_system_score_codex":0.000008285899,"about_ca_system_score_gemma":0.000022937831,"threshold_uncertainty_score":0.3922829},"labels":[],"label_agreement":null},{"id":"W2397746403","doi":"10.1007/978-1-62703-038-0_8","title":"Computer-Aided Sperm Analysis (CASA) of Sperm Motility and Hyperactivation","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Achieve Life Sciences (Canada)","funders":"","keywords":"Hyperactivation; Sperm; Motility; Semen; Oocyte; Sperm motility; Biology; Andrology; Semen analysis; Sperm washing; Sperm cell; Mucus; Anatomy; Cell biology; Embryo; Insemination; Medicine; Genetics; Infertility","score_opus":0.0385129739328454,"score_gpt":0.40568249406353324,"score_spread":0.3671695201306878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397746403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54194784,0.0002654212,0.45734075,0.00005092934,0.00009543026,0.00009779166,0.0000012919995,0.000009526073,0.0001910266],"genre_scores_gemma":[0.57357734,0.000010546932,0.42620912,0.00011877064,0.000045564357,0.0000035490712,0.000023652301,0.0000053787394,0.0000061083106],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9986602,0.0005754989,0.00027486114,0.00022901148,0.000067763845,0.00019267859],"domain_scores_gemma":[0.99926394,0.00023949923,0.000090115296,0.0002659815,0.00006382222,0.00007665073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010339768,0.0001132637,0.0004358244,0.00030604826,0.000016574764,0.0000026553803,0.00003653613,0.00015014912,0.0000767558],"category_scores_gemma":[0.0005811495,0.000096899304,0.000108710614,0.0005319979,0.00010049281,0.000026303062,0.000044738037,0.00013623158,0.0000016041312],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032460975,0.000116496085,0.5393515,0.000019511901,0.00016435335,0.0000046737887,0.00007457588,0.000016580127,0.43702668,0.0005203381,9.947311e-7,0.02267179],"study_design_scores_gemma":[0.0005964125,0.00017801317,0.8703393,0.000010278595,0.00046251097,0.000057105288,0.000029576466,0.005095619,0.12251897,0.00049731456,0.00013240443,0.000082547325],"about_ca_topic_score_codex":0.00010455619,"about_ca_topic_score_gemma":0.0000028992924,"teacher_disagreement_score":0.3309877,"about_ca_system_score_codex":0.000035219764,"about_ca_system_score_gemma":0.000015592423,"threshold_uncertainty_score":0.3951439},"labels":[],"label_agreement":null},{"id":"W2397778779","doi":"10.1007/978-1-62703-134-9_30","title":"Multiplexed Surface Plasmon Resonance Imaging for Protein Biomarker Analysis","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"ALCAM; Surface plasmon resonance; Microfluidics; Molecular binding; Nanotechnology; Analyte; Proteomics; Chemistry; Molecular imaging; Biomarker; Materials science; Cell; Molecule; Biology; Nanoparticle; Biochemistry; Chromatography","score_opus":0.025688839991489885,"score_gpt":0.41319721101963214,"score_spread":0.38750837102814223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397778779","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09744039,0.0020119157,0.8995832,0.0001563456,0.00004946693,0.00056284264,0.000033476317,0.000031865293,0.00013046265],"genre_scores_gemma":[0.26407278,0.000019945255,0.7352951,0.00017439683,0.0000305281,0.00013904076,0.00014956984,0.000022917266,0.00009569448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983909,0.00035787956,0.0002842251,0.0004620928,0.000041444146,0.00046346252],"domain_scores_gemma":[0.99919426,0.000047273355,0.00011508867,0.00050599175,0.00006811693,0.00006924834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009809283,0.0001913982,0.0002583671,0.00010902289,0.00006514529,0.000008342994,0.00019846245,0.00020020772,0.0000043638815],"category_scores_gemma":[0.00031398583,0.00018509981,0.00018913815,0.0004262112,0.00012658903,0.000003816762,0.00012976234,0.00009093076,9.564508e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053335945,0.000055615317,0.0070412974,0.0000050810586,0.000049460057,5.205274e-7,0.000007973124,0.000049712045,0.9757752,0.0013398918,0.000051459163,0.015570466],"study_design_scores_gemma":[0.00031329377,0.000040685532,0.0011615969,0.0000054831494,0.000050124836,0.00000366856,0.00001287798,0.0015509687,0.94327503,0.0013970543,0.051947728,0.00024145546],"about_ca_topic_score_codex":0.00002120764,"about_ca_topic_score_gemma":0.000008801849,"teacher_disagreement_score":0.1666324,"about_ca_system_score_codex":0.000023996276,"about_ca_system_score_gemma":0.000018382138,"threshold_uncertainty_score":0.7548151},"labels":[],"label_agreement":null},{"id":"W2397783496","doi":"10.1007/978-1-59745-133-8_10","title":"Production and Characterization of Immortal Human Neural Stem Cell Line with Multipotent Differentiation Property","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital","funders":"","keywords":"Neural stem cell; Neuroepithelial cell; Neurosphere; Stem cell; Biology; Nestin; Neuroscience; Cell biology; Neural cell; Cell culture; Cellular differentiation; Adult stem cell; Cell; Gene; Genetics","score_opus":0.052885336881471026,"score_gpt":0.31613092649233837,"score_spread":0.26324558961086736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397783496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.819512,0.000008228944,0.17995404,0.000029943505,0.00014058285,0.0003267771,0.0000033167523,0.00001916451,0.000005955195],"genre_scores_gemma":[0.98828053,0.00003261341,0.011478998,0.000079113735,0.000019137768,0.000027584234,0.000006542166,0.000019282643,0.000056201556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803054,0.000997883,0.00026099745,0.00045887483,0.00009104101,0.00016063655],"domain_scores_gemma":[0.9995488,0.000044586362,0.00017037628,0.00016957456,0.000033913147,0.000032753822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016391878,0.00013850536,0.00021584387,0.00012403433,0.000079160556,0.000005753117,0.000084755025,0.00006296416,0.0000030718868],"category_scores_gemma":[0.00007894254,0.00009194692,0.000027314432,0.00018631031,0.00012601593,0.000047826474,0.000057569887,0.000111563044,3.2678687e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005383119,0.00012255767,0.00204809,0.000022990704,0.0000017226295,0.0000242846,0.00007361356,0.0000654194,0.9956044,0.00010189225,6.160245e-8,0.0018811262],"study_design_scores_gemma":[0.0002839056,0.00051837484,0.007978348,0.000007907651,0.000009826868,0.00008625035,0.0000034867057,0.0040717972,0.9869173,0.000013398776,0.0000063582656,0.0001030428],"about_ca_topic_score_codex":0.0000059315144,"about_ca_topic_score_gemma":0.0000018769176,"teacher_disagreement_score":0.16876854,"about_ca_system_score_codex":0.000008236898,"about_ca_system_score_gemma":0.0000093398485,"threshold_uncertainty_score":0.37494862},"labels":[],"label_agreement":null},{"id":"W2397945397","doi":"10.1007/978-1-4939-3112-5_13","title":"Non-Covalently Functionalized of Single-Walled Carbon Nanotubes by DSPE-PEG-PEI for SiRNA Delivery","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Polyethylenimine; Covalent bond; Surface modification; Polyethylene glycol; PEG ratio; Carbon nanotube; Conjugated system; Gene delivery; Small interfering RNA; Materials science; In vivo; Nanotechnology; Combinatorial chemistry; Chemistry; Biophysics; Chemical engineering; RNA; Transfection; Organic chemistry; Polymer; Biochemistry; Gene; Biology","score_opus":0.03616424333535795,"score_gpt":0.34975590319393274,"score_spread":0.3135916598585748,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397945397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6682067,0.006105173,0.32355893,0.00009544098,0.0005334818,0.00037067957,0.00004793735,0.000010256932,0.0010714337],"genre_scores_gemma":[0.6103678,0.00046096888,0.38557097,0.0010937178,0.00022737627,0.00025187878,0.00069037435,0.00007993254,0.0012569983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979888,0.0004625171,0.00049873843,0.000567664,0.00010444368,0.00037779758],"domain_scores_gemma":[0.9988776,0.00008744358,0.00017249912,0.00043338278,0.00031436404,0.00011471174],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093687687,0.0002643722,0.00045294722,0.00013637394,0.000024781546,0.00000956215,0.0003337131,0.00041342838,0.00001731488],"category_scores_gemma":[0.00072127715,0.0002547096,0.000215373,0.00014658122,0.00018287997,0.000003903235,0.00015574902,0.00010676782,0.0000019269269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006249076,0.00014767937,0.001065838,0.000023284607,0.00013189769,0.00000343543,0.00004518644,0.00008132741,0.99169266,0.00007317802,0.00091906026,0.0051915227],"study_design_scores_gemma":[0.00207676,0.001716246,0.000041658288,0.000019080488,0.000043083848,0.000010772168,0.00010194337,0.00026415545,0.9675463,0.0011736553,0.026717195,0.00028916015],"about_ca_topic_score_codex":0.000121930185,"about_ca_topic_score_gemma":0.000024767976,"teacher_disagreement_score":0.062012043,"about_ca_system_score_codex":0.000038888833,"about_ca_system_score_gemma":0.0001574091,"threshold_uncertainty_score":0.9999905},"labels":[],"label_agreement":null},{"id":"W2397990992","doi":"10.1007/978-1-59745-237-3_15","title":"Oncolytic Adenoviruses for Cancer Gene Therapy","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jennerex Biotherapeutics (Canada)","funders":"","keywords":"Oncolytic virus; Oncolytic adenovirus; Biology; Genetic enhancement; Transgene; Gene; Viral replication; Vectors in gene therapy; Virus; Virology; Cancer research; Viral vector; Genetics; Recombinant DNA","score_opus":0.08375482201320289,"score_gpt":0.4735615622261098,"score_spread":0.3898067402129069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2397990992","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6210607,0.013813126,0.3637413,0.00025067283,0.00021937357,0.0006874699,0.000037858365,0.000019061876,0.00017036717],"genre_scores_gemma":[0.12507582,0.012592728,0.8532983,0.0050518075,0.0006257221,0.0019065889,0.0001997147,0.00018783988,0.0010614855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997439,0.00090660516,0.00032180516,0.0006530841,0.000097674754,0.00058180233],"domain_scores_gemma":[0.99902236,0.00010177901,0.0000843369,0.00057286705,0.00012236484,0.000096258285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009838217,0.0002552584,0.0003418953,0.0001608695,0.000102684564,0.000008009948,0.00045706544,0.000350571,0.000062786385],"category_scores_gemma":[0.00027684166,0.00023740945,0.00018604854,0.00024082902,0.0002867402,0.0000023183895,0.00011271438,0.00017194233,0.0000052042496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014723192,0.000092932496,0.0020123478,0.0000066981074,0.000099886915,0.000012792964,0.000040582123,0.00013777247,0.9599414,0.00006966247,0.00016522687,0.03594838],"study_design_scores_gemma":[0.0015833004,0.0023968713,0.0002491959,0.00000425441,0.0000060495004,0.00002345079,0.000008757271,0.000075598786,0.94920176,0.0008404735,0.045336414,0.00027389263],"about_ca_topic_score_codex":0.0000654745,"about_ca_topic_score_gemma":0.00010767252,"teacher_disagreement_score":0.49598494,"about_ca_system_score_codex":0.0000496561,"about_ca_system_score_gemma":0.0003076863,"threshold_uncertainty_score":0.9681276},"labels":[],"label_agreement":null},{"id":"W2398050367","doi":"10.1007/978-1-61779-959-4_15","title":"Identification of New Autoimmune Hepatitis-Specific Autoantigens by Using Protein Microarray Technology","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Alberta Innovates - Health Solutions","keywords":"Autoimmune hepatitis; Autoantibody; Protein microarray; Disease; Microarray; Immunology; Identification (biology); Autoimmune disease; Hepatitis; Etiology; Liver disease; Medicine; Biology; Antibody; Pathology; Gene; Internal medicine; Gene expression; Genetics","score_opus":0.04099934509692085,"score_gpt":0.4092919745378333,"score_spread":0.36829262944091246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398050367","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48295534,0.008899172,0.507081,0.00020840399,0.00014360294,0.0006161422,0.000003565874,0.000034776964,0.00005803203],"genre_scores_gemma":[0.26202348,0.00014014987,0.7368374,0.000038173785,0.000049922775,0.00006535963,0.00002288486,0.000048012436,0.000774644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99719316,0.0009101642,0.0008132911,0.00036513183,0.00015252878,0.0005657298],"domain_scores_gemma":[0.9986978,0.000078597746,0.00027300467,0.0007282435,0.00012252656,0.000099812605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023940734,0.00018404299,0.0006059845,0.00064534176,0.000033699995,0.0000058985133,0.00025206694,0.00045425099,0.00007422793],"category_scores_gemma":[0.00065619085,0.0001719811,0.00009810522,0.00085994805,0.00028184862,0.000037166785,0.00011456514,0.0003328187,0.00001830149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029657429,0.00010297646,0.09748131,0.0001103741,0.000049218095,0.0000068155414,0.00025615064,9.1817554e-7,0.89122266,0.001644257,0.00008012878,0.009015515],"study_design_scores_gemma":[0.0007669018,0.00008792848,0.00090133055,0.0001577086,0.000019469475,0.00075037294,0.00013333093,0.0002087061,0.99152577,0.0008983675,0.004408515,0.00014160296],"about_ca_topic_score_codex":0.00017895021,"about_ca_topic_score_gemma":0.0000016442747,"teacher_disagreement_score":0.22975643,"about_ca_system_score_codex":0.00018773806,"about_ca_system_score_gemma":0.00015256125,"threshold_uncertainty_score":0.70131856},"labels":[],"label_agreement":null},{"id":"W2398169040","doi":"10.1007/978-1-60327-475-3_13","title":"Proteins Specifically Modified With a Chemical Nuclease as Probes of RNA-Protein Interaction","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Nuclease; RNA; Chemistry; Computational biology; Biochemistry; Cell biology; Biophysics; Biology; DNA; Gene","score_opus":0.021360569152643262,"score_gpt":0.3325228693371628,"score_spread":0.3111623001845195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398169040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7394785,0.00015033703,0.25878304,0.00010879334,0.0000136330855,0.00023557982,0.000003902832,0.000008723244,0.0012174876],"genre_scores_gemma":[0.68705076,0.000029041657,0.31261632,0.000076953125,0.0000408175,0.00006603872,0.000029072333,0.000020874475,0.00007011741],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828124,0.00042817803,0.0003905101,0.0005285394,0.0001022014,0.0002693206],"domain_scores_gemma":[0.9992182,0.00003307676,0.00016007031,0.0004157725,0.000087391476,0.0000854493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035562128,0.00021010307,0.00038280286,0.000090047455,0.000029605062,0.0000055526066,0.0002519189,0.0002778461,0.00005326229],"category_scores_gemma":[0.00051055074,0.00016905706,0.00017227771,0.00022330522,0.00030220996,0.0000031610339,0.00012179577,0.00018800974,0.000003411947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040383573,0.00021409875,0.00028846,0.000017677403,0.00008076275,0.000024029152,0.000024971077,0.000031424606,0.99342465,0.00057698466,0.000008465818,0.0049046213],"study_design_scores_gemma":[0.00050467555,0.0003126682,0.000065456195,0.000029946794,0.000020842477,0.00004160062,0.000023707038,0.000110150075,0.9966607,0.00090543524,0.0011125992,0.00021223183],"about_ca_topic_score_codex":0.00008484527,"about_ca_topic_score_gemma":0.0000061440087,"teacher_disagreement_score":0.053833272,"about_ca_system_score_codex":0.00002246719,"about_ca_system_score_gemma":0.000061006824,"threshold_uncertainty_score":0.6893947},"labels":[],"label_agreement":null},{"id":"W2398283097","doi":"10.1007/978-1-4939-2877-4_11","title":"Precise Identification of DNA-Binding Proteins Genomic Location by Exonuclease Coupled Chromatin Immunoprecipitation (ChIP-exo)","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Université de Sherbrooke","keywords":"Chromatin immunoprecipitation; ChIP-sequencing; ChIP-on-chip; Exonuclease; Immunoprecipitation; DNA; Chromatin; Footprinting; Computational biology; Biology; Cell biology; Molecular biology; Chemistry; Genetics; Gene; Chromatin remodeling; DNA polymerase; Promoter; Gene expression; Base sequence","score_opus":0.015148720850398024,"score_gpt":0.324134520645665,"score_spread":0.30898579979526697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398283097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56667,0.000542233,0.43216464,0.000017009448,0.000120410376,0.00036381645,0.000019719695,0.000008076352,0.00009406474],"genre_scores_gemma":[0.702433,0.00006725722,0.2965777,0.000030026053,0.000025284624,0.00011428311,0.000626878,0.000038556922,0.00008704552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977462,0.000707611,0.00071992585,0.00047292133,0.000089757996,0.0002635671],"domain_scores_gemma":[0.9986861,0.000026709446,0.000460185,0.00054763776,0.00019918961,0.000080214464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016679362,0.00021131392,0.0002819685,0.0001404446,0.000038766007,0.000017220014,0.00034887053,0.00030767656,0.000008489642],"category_scores_gemma":[0.0006134892,0.00023270442,0.00008002693,0.00023292247,0.00013243417,0.0000067387823,0.00014902398,0.00011331949,0.000008203361],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008295194,0.00011718227,0.0005456456,0.000033625805,0.00004267176,8.465042e-7,0.00021886476,0.00038825197,0.99447316,0.00036691566,0.000026347365,0.0037035595],"study_design_scores_gemma":[0.0008750509,0.00032799612,0.00108683,0.000017608392,0.000027042632,0.000007974341,0.00017307846,0.0068033044,0.9876062,0.00250994,0.00030503844,0.0002598955],"about_ca_topic_score_codex":0.0000735043,"about_ca_topic_score_gemma":0.000017429145,"teacher_disagreement_score":0.13576296,"about_ca_system_score_codex":0.000083325824,"about_ca_system_score_gemma":0.00013988852,"threshold_uncertainty_score":0.9489411},"labels":[],"label_agreement":null},{"id":"W2398292067","doi":"10.1007/978-1-61779-154-3_2","title":"In Silico Mining and PCR-Based Approaches to Transcription Factor Discovery in Non-model Plants: Gene Discovery of the WRKY Transcription Factors in Conifers","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Canadian Forest Service; Natural Resources Canada","funders":"Natural Resources Canada","keywords":"WRKY protein domain; Biology; In silico; Gene; Computational biology; Genetics; Transcription factor; Transcriptome; Gene expression","score_opus":0.08171450179746075,"score_gpt":0.3181378495538357,"score_spread":0.23642334775637497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398292067","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7214597,0.0001533345,0.2778743,0.00004858389,0.00007002392,0.0002704774,0.000079977006,0.000002071466,0.000041567982],"genre_scores_gemma":[0.93721735,0.000062933206,0.062330373,0.00019866406,0.00000703151,0.000054598047,0.0000830533,0.000019374445,0.00002661886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99746734,0.0009788183,0.0005381576,0.00059324555,0.000088333356,0.00033408997],"domain_scores_gemma":[0.9994251,0.00005218479,0.000114462055,0.00035023876,0.000010500821,0.000047517715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068573956,0.00025600457,0.00044582476,0.00041391564,0.000017768189,0.000011439999,0.0002925517,0.00035362088,0.0000028348588],"category_scores_gemma":[0.00014203716,0.00020419368,0.000128052,0.0003187633,0.0001326063,0.000021690435,0.00007213002,0.00018044475,9.594009e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028343467,0.00013168114,0.06405267,0.000021878988,0.00002025951,0.0000052007726,0.0010392435,0.0025880332,0.93137425,0.000028994331,0.000002943146,0.0004513957],"study_design_scores_gemma":[0.0009174803,0.00011561528,0.028701736,0.000052674724,0.000012713218,0.0000020632872,0.0004343761,0.003959669,0.9653756,0.00018269497,0.0000150348405,0.00023034112],"about_ca_topic_score_codex":0.00033062798,"about_ca_topic_score_gemma":0.0013497872,"teacher_disagreement_score":0.21575768,"about_ca_system_score_codex":0.000043976135,"about_ca_system_score_gemma":0.00007343958,"threshold_uncertainty_score":0.83267766},"labels":[],"label_agreement":null},{"id":"W2398295360","doi":"10.1007/978-1-61779-418-6_11","title":"Profiling Cervical Lavage Fluid by SELDI-TOF Mass Spectrometry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Proteomics; Mass spectrometry; Profiling (computer programming); Chromatography; Chemistry; Computer science; Gene; Biochemistry","score_opus":0.03841279775185853,"score_gpt":0.39369585814492764,"score_spread":0.3552830603930691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398295360","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13128108,0.0042827264,0.8489238,0.00012360582,0.00071265973,0.00047230214,0.000022606366,0.00010982317,0.014071411],"genre_scores_gemma":[0.12142837,0.00014490305,0.8769295,0.00017378757,0.000037041005,0.00014167554,0.00010248813,0.00004987422,0.0009923581],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99432206,0.0036957548,0.00043068363,0.00078897335,0.00003556009,0.00072695315],"domain_scores_gemma":[0.99875283,0.00032555911,0.00008695922,0.0007023951,0.00009416499,0.00003810255],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0024249374,0.00024891167,0.00044961076,0.00046212098,0.00009315603,0.000008085373,0.00044965127,0.00060261856,0.0015159226],"category_scores_gemma":[0.001073115,0.00022699156,0.00012797995,0.0006358607,0.000492863,0.000049340706,0.00018801402,0.00096602837,0.00032670586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009237901,0.00023267731,0.014551863,0.000013683307,0.0001377571,0.000023333017,0.000082428196,9.620038e-7,0.97400194,0.006216772,0.00011267752,0.0045335474],"study_design_scores_gemma":[0.00053124025,0.00037816959,0.0019570496,0.0000062112563,0.000016399847,0.000082129496,0.00007226246,0.0000054216057,0.98438823,0.0070876135,0.0052448837,0.00023037396],"about_ca_topic_score_codex":0.00015966842,"about_ca_topic_score_gemma":0.0000032736052,"teacher_disagreement_score":0.02800571,"about_ca_system_score_codex":0.000095419724,"about_ca_system_score_gemma":0.00006303105,"threshold_uncertainty_score":0.9993968},"labels":[],"label_agreement":null},{"id":"W2398301086","doi":"10.1007/978-1-61779-870-2_1","title":"Sampling in Landscape Genomics","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Genomics; Sampling (signal processing); Selection (genetic algorithm); Identification (biology); Sampling design; Geography; Population; Computer science; Biology; Genome; Ecology; Machine learning; Genetics; Medicine","score_opus":0.029616252458122157,"score_gpt":0.3720245810777254,"score_spread":0.34240832861960324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398301086","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37206036,0.003247676,0.6224087,0.00003291864,0.00028479632,0.00012307934,0.0000036538147,0.000005648094,0.0018331743],"genre_scores_gemma":[0.22897236,0.000045636138,0.7703877,0.00030738168,0.00014469626,0.000029747138,0.000038781716,0.000021269794,0.00005244671],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828744,0.0005552106,0.00028799576,0.00032604596,0.000037843172,0.0005054566],"domain_scores_gemma":[0.99945736,0.0000502524,0.000055886947,0.00033888206,0.000016893631,0.000080725404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009863902,0.0001711973,0.0002150361,0.00011196797,0.000021677488,0.0000056329113,0.0002337339,0.00030697478,0.000031683972],"category_scores_gemma":[0.00021206397,0.00017141979,0.00006545325,0.00014634547,0.000079741374,0.0000019632107,0.00015517126,0.00017879666,0.0000072834514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037696598,0.0000882679,0.08653578,0.000008326364,0.000017860388,6.6924713e-7,0.0001366456,0.00067692157,0.88662976,0.010334848,0.000021764718,0.01551144],"study_design_scores_gemma":[0.002367063,0.00060922105,0.27366272,0.000026931886,0.000033067583,0.00007369911,0.00036211603,0.000103640996,0.60089046,0.03726427,0.08345656,0.0011502801],"about_ca_topic_score_codex":0.000015671407,"about_ca_topic_score_gemma":0.000014547744,"teacher_disagreement_score":0.28573936,"about_ca_system_score_codex":0.000017519546,"about_ca_system_score_gemma":0.00004190259,"threshold_uncertainty_score":0.6990296},"labels":[],"label_agreement":null},{"id":"W2398308701","doi":"10.1007/978-1-59745-154-3_14","title":"Transgenesis Using Nuclear Transfer in Goats","year":2006,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Quebec Rehabilitation Research Network","funders":"","keywords":"Transgenesis; Transgene; Biology; Recombinant DNA; Genetically modified mouse; Genetically modified organism; Embryo; Molecular biology; Cell biology; Gene; Genetics; Embryogenesis; Reproductive technology","score_opus":0.021253149809851556,"score_gpt":0.3601417439027217,"score_spread":0.33888859409287014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398308701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56790185,0.00095094,0.4305155,0.000053777945,0.00010295071,0.00011763609,0.0000026273271,0.0000057293014,0.00034898336],"genre_scores_gemma":[0.7253402,0.000115289804,0.27413714,0.00012855128,0.00011651142,0.000010821373,0.000025957495,0.000036964135,0.00008856153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981959,0.000534304,0.00032641532,0.0005689368,0.00004894773,0.00032553464],"domain_scores_gemma":[0.9996097,0.000008874639,0.000027686065,0.00029297557,0.000029488707,0.000031260348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061348506,0.00017555569,0.00022183142,0.00014100825,0.00003198108,0.000008076297,0.0001570784,0.00032646584,0.00001787543],"category_scores_gemma":[0.00003440438,0.0001750816,0.000106899184,0.00022955354,0.00011573791,0.0000016648712,0.0000405226,0.00011938175,0.0000018584207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059029593,0.0000761026,0.0044109263,0.000008560455,0.00001086531,0.00000966745,0.000018953218,0.0011090446,0.9896771,0.0009663667,0.0000052557316,0.0036481498],"study_design_scores_gemma":[0.00060820446,0.00021019121,0.0050359773,0.00000866739,0.00001478944,0.000029459221,0.000029552933,0.0004908158,0.9773259,0.0013794084,0.01457405,0.00029299557],"about_ca_topic_score_codex":0.00023616271,"about_ca_topic_score_gemma":0.000095698015,"teacher_disagreement_score":0.15743837,"about_ca_system_score_codex":0.000022061264,"about_ca_system_score_gemma":0.00003205316,"threshold_uncertainty_score":0.713962},"labels":[],"label_agreement":null},{"id":"W2398311063","doi":"10.1007/978-1-61779-120-8_6","title":"Measurement of Fluid Secretion from Intact Airway Submucosal Glands","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Saskatchewan","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Mucus; Submucosal glands; Secretion; Mucin; Mucociliary clearance; Lysozyme; Chemistry; Lung; Airway; Biology; Cell biology; Immunology; Internal medicine; Endocrinology; Medicine; Biochemistry","score_opus":0.056745400339975854,"score_gpt":0.40402326664168836,"score_spread":0.34727786630171253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398311063","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21861498,0.0017384142,0.7779202,0.00007161425,0.00014282625,0.00025016698,0.0000094891275,0.00001818634,0.0012341497],"genre_scores_gemma":[0.39643297,0.000045705525,0.6033785,0.00005281491,0.000023271466,0.000024343906,0.000025474266,0.00001171512,0.0000052315136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978496,0.0009872493,0.0003585112,0.000309601,0.00022123846,0.00027380098],"domain_scores_gemma":[0.9991875,0.000120837125,0.00007926682,0.00036536725,0.00015538486,0.00009163384],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017574243,0.00013004709,0.0004048451,0.0001996461,0.000012697654,0.0000020328475,0.00014293726,0.0001461638,0.00027370546],"category_scores_gemma":[0.0018746222,0.000106636166,0.000089995316,0.00021829898,0.00016364545,0.000020090938,0.000086827764,0.00020716619,0.000006772073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005143681,0.00010392955,0.020056274,0.000032267697,0.00005961241,0.000026531707,0.00013264954,8.5113436e-7,0.9504435,0.00051167095,0.000009681088,0.028108664],"study_design_scores_gemma":[0.0010739615,0.0008809393,0.033461,0.00008849952,0.000032134463,0.000008300072,0.000046148445,0.00019751745,0.9568659,0.006395926,0.0008513961,0.00009828303],"about_ca_topic_score_codex":0.0005130335,"about_ca_topic_score_gemma":0.000040984913,"teacher_disagreement_score":0.17781799,"about_ca_system_score_codex":0.000098263496,"about_ca_system_score_gemma":0.00009651822,"threshold_uncertainty_score":0.43484965},"labels":[],"label_agreement":null},{"id":"W2398321779","doi":"10.1007/978-1-4939-3584-0_16","title":"Optimization of Mesenchymal Stem Cells to Increase Their Therapeutic Potential","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Mesenchymal stem cell; Stem cell; Biology; Cell biology","score_opus":0.040624494421182634,"score_gpt":0.4068926877023126,"score_spread":0.36626819328113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398321779","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09687613,0.00038100703,0.9004176,0.0006177667,0.00013041646,0.00056325865,0.000007859319,0.000018399578,0.0009875194],"genre_scores_gemma":[0.35123435,0.00008548434,0.64769775,0.00034241885,0.00004052839,0.000044332,0.000004180862,0.000031322368,0.0005196586],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966441,0.0019927456,0.0004062931,0.00039717916,0.00016595377,0.00039374534],"domain_scores_gemma":[0.99871236,0.0003975548,0.00008338111,0.00047949288,0.00015080422,0.00017640578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019853418,0.000165832,0.00045222408,0.00034534166,0.000019574583,0.000004279199,0.00021695443,0.00021258769,0.00032391143],"category_scores_gemma":[0.00026727046,0.00010099032,0.00011275038,0.00041266106,0.00014416149,0.000019087709,0.00016646956,0.00014125828,0.000016770928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027642993,0.00007655765,0.0011455158,0.000029502919,0.00004564578,0.000040605035,0.00004595437,0.00038748764,0.90001845,0.00056816795,0.0000089312025,0.09735675],"study_design_scores_gemma":[0.0010816666,0.00064338936,0.0003720945,0.000062675696,0.000024676838,0.00002771727,0.000042863907,0.0018165192,0.9942767,0.00066282664,0.000861012,0.00012783872],"about_ca_topic_score_codex":0.000061952596,"about_ca_topic_score_gemma":0.000002044277,"teacher_disagreement_score":0.2543582,"about_ca_system_score_codex":0.00007558977,"about_ca_system_score_gemma":0.0001119838,"threshold_uncertainty_score":0.41182658},"labels":[],"label_agreement":null},{"id":"W2398336024","doi":"10.1007/978-1-61779-545-9_25","title":"Developing Fluorogenic RNA-Cleaving DNAzymes for Biosensing Applications","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Deoxyribozyme; RNase H; Aptamer; RNA; RNase P; DNA; Ribozyme; Chemistry; Nucleic acid; Biochemistry; Biology; Molecular biology","score_opus":0.03253845498087536,"score_gpt":0.42580417962516165,"score_spread":0.3932657246442863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398336024","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03088119,0.0021592556,0.9660196,0.00018215709,0.000103290055,0.00041120147,0.000010293832,0.00004953062,0.0001834823],"genre_scores_gemma":[0.22803786,0.00011219098,0.7709204,0.00048054615,0.00017268362,0.000101615464,0.00010554218,0.000030901178,0.000038254428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816144,0.00038858154,0.00037749528,0.0004630425,0.00005035833,0.00055910787],"domain_scores_gemma":[0.9991798,0.000087803935,0.0001377106,0.0004220606,0.00009569834,0.000076934884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012291615,0.0002294461,0.0002901159,0.00016153864,0.00011166408,0.000013944844,0.00020180596,0.00032744976,8.4550214e-7],"category_scores_gemma":[0.00036036468,0.00021846373,0.00018565447,0.00028207988,0.00013971141,0.000004953526,0.00015256822,0.00011619647,0.0000013330017],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016117412,0.000029206643,0.0007951384,0.000011884473,0.000048829654,4.3252038e-7,0.00001107423,0.00000269185,0.92414314,0.0040508793,0.00001807419,0.07087256],"study_design_scores_gemma":[0.0001900731,0.00006123961,0.00009154476,0.000011717783,0.00003276199,0.00001898234,0.000045026092,0.000047949678,0.9600691,0.0034554875,0.035680316,0.0002957563],"about_ca_topic_score_codex":0.0000062876834,"about_ca_topic_score_gemma":0.0000064284063,"teacher_disagreement_score":0.19715667,"about_ca_system_score_codex":0.000049202226,"about_ca_system_score_gemma":0.00004813331,"threshold_uncertainty_score":0.8908692},"labels":[],"label_agreement":null},{"id":"W2398356398","doi":"10.1007/978-1-62703-730-3_11","title":"Probing Riboswitch Binding Sites with Molecular Docking, Focused Libraries, and In-line Probing Assays","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Riboswitch; Docking (animal); In silico; Computational biology; Chemical space; Chemistry; RNA; Nanotechnology; Biology; Drug discovery; Materials science; Biochemistry; Medicine","score_opus":0.02060258177490234,"score_gpt":0.3070822292986955,"score_spread":0.2864796475237932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398356398","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5883779,0.0015517424,0.40871045,0.00021333361,0.000050729628,0.0007010378,0.0000026645625,0.00002210698,0.000370027],"genre_scores_gemma":[0.4356231,0.000066118846,0.5635068,0.0002839329,0.000035501336,0.0003241929,0.000051731502,0.000062201376,0.00004643942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99671066,0.0011716619,0.00047050946,0.0008810485,0.000106898,0.0006592362],"domain_scores_gemma":[0.99904335,0.00009946558,0.00018067518,0.0005000698,0.000063766514,0.00011266464],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001224102,0.00039228768,0.00047783257,0.0002887747,0.00007722894,0.00008767995,0.00033771427,0.00046999712,0.000032847227],"category_scores_gemma":[0.00039204166,0.00033707026,0.00007429875,0.00033673644,0.00017067784,0.000019492829,0.00031924277,0.0002900284,0.000004428876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000069077694,0.00004853388,0.0048864814,0.000041477273,0.000052454332,0.000040359853,0.00008933895,0.00016379918,0.9784419,0.0018927195,0.000005307126,0.014268562],"study_design_scores_gemma":[0.00089689344,0.00044663178,0.00017526944,0.00008884085,0.00001794088,0.000043287357,0.00006365636,0.00044942403,0.9877875,0.008856205,0.00070886477,0.0004654964],"about_ca_topic_score_codex":0.00008166273,"about_ca_topic_score_gemma":0.00002808452,"teacher_disagreement_score":0.15479632,"about_ca_system_score_codex":0.000027340917,"about_ca_system_score_gemma":0.000088679764,"threshold_uncertainty_score":0.99990815},"labels":[],"label_agreement":null},{"id":"W2398424697","doi":"10.1007/978-1-4939-1594-1_15","title":"Studying Bovine Early Embryo Transcriptome by Microarray","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Transcriptome; Microarray; Embryo; DNA microarray; Biology; Microarray analysis techniques; Gene chip analysis; Computational biology; Gene; Gene expression; Genetics","score_opus":0.014503260319940757,"score_gpt":0.33483488597601163,"score_spread":0.3203316256560709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398424697","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41048497,0.0017300127,0.58661175,0.0001424872,0.00025085045,0.00014204797,0.00000466931,0.000011572588,0.00062166987],"genre_scores_gemma":[0.6721278,0.0001754137,0.32563907,0.0006151552,0.00022093502,0.000043564087,0.00008763435,0.000053461,0.0010370103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99756294,0.0009095555,0.00032644818,0.0007455758,0.00006604454,0.00038940264],"domain_scores_gemma":[0.99927366,0.00001891699,0.000082438055,0.0004925386,0.000056741308,0.00007570255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012246883,0.00022585515,0.00027337912,0.00008959536,0.00005970479,0.000016389795,0.00027341023,0.0003118113,0.000014501215],"category_scores_gemma":[0.0002117776,0.0002119583,0.000117866795,0.00016270927,0.0001518381,0.0000018819585,0.00009748441,0.00018326595,0.000006504056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006325426,0.00006524032,0.0021391346,0.000009022042,0.00003732748,0.0000013173071,0.00004317203,0.00001632252,0.9828716,0.00028705952,0.00017435644,0.01429223],"study_design_scores_gemma":[0.00056409475,0.0009860736,0.0014787546,0.0000055077803,0.000017649487,0.000012817104,0.00002720846,0.000049855364,0.89896625,0.00072996883,0.0968707,0.00029113257],"about_ca_topic_score_codex":0.00004441348,"about_ca_topic_score_gemma":0.0000069894218,"teacher_disagreement_score":0.2616428,"about_ca_system_score_codex":0.000012846495,"about_ca_system_score_gemma":0.000021919739,"threshold_uncertainty_score":0.86434084},"labels":[],"label_agreement":null},{"id":"W2398477216","doi":"10.1007/978-1-62703-429-6_4","title":"Identifying Myc Interactors","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Toronto Rehabilitation Institute; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"In silico; Immunoprecipitation; Protein–protein interaction; In vitro; Computational biology; Cytoplasm; Identification (biology); Chemistry; Cell biology; Biology; Biochemistry; Gene","score_opus":0.02177912190141771,"score_gpt":0.36617188857902966,"score_spread":0.34439276667761193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398477216","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32278565,0.0006132749,0.6752205,0.00006152286,0.00025159112,0.00016043206,0.0000013992567,0.000010843319,0.0008948172],"genre_scores_gemma":[0.46836156,0.00012240115,0.52942884,0.0005364454,0.00010313958,0.00009505818,0.0009497256,0.000039111263,0.00036369535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984837,0.00043292152,0.00029833827,0.00042272714,0.000050213243,0.0003121004],"domain_scores_gemma":[0.9994504,0.000021416769,0.00006553463,0.00034659897,0.000049897604,0.00006615398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046706223,0.00017103247,0.00019500712,0.00011933372,0.000030529132,0.00002089841,0.00022794602,0.00026859457,0.00022044324],"category_scores_gemma":[0.000120125864,0.00016517058,0.00012825332,0.00013650402,0.00008845654,0.0000042850684,0.00008844866,0.00016475031,0.000033794313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000114517625,0.000026177133,0.009664138,0.000008464552,0.000023212602,0.0000059420454,0.00004644723,0.000007759694,0.980654,0.0005024834,0.000018272887,0.009031633],"study_design_scores_gemma":[0.00041011602,0.00013977989,0.0052843746,0.000012765595,0.000011519399,0.00001506582,0.00008191198,0.00012820096,0.96357745,0.005352519,0.02469494,0.00029135784],"about_ca_topic_score_codex":0.000116636416,"about_ca_topic_score_gemma":0.000027122807,"teacher_disagreement_score":0.1457916,"about_ca_system_score_codex":0.000014499057,"about_ca_system_score_gemma":0.000022120732,"threshold_uncertainty_score":0.6735461},"labels":[],"label_agreement":null},{"id":"W2398505113","doi":"10.1007/978-1-4939-1016-8_8","title":"Identification of Human Eosinophils in Whole Blood by Flow Cytometry","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Flow cytometry; Eosinophil; Immunology; Identification (biology); Whole blood; Population; Autofluorescence; Biology; Medicine; Botany; Asthma","score_opus":0.01440191226099888,"score_gpt":0.3940633174270736,"score_spread":0.3796614051660747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398505113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65428543,0.00095847284,0.34421152,0.00011857205,0.000058225094,0.00015279205,0.00000832524,0.000011691397,0.00019495156],"genre_scores_gemma":[0.9083249,0.0000073659035,0.09110652,0.00035277018,0.000032630673,0.000025378336,0.00005141383,0.000016485745,0.000082511484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981228,0.0009607088,0.00041682174,0.00025991164,0.000068453104,0.00017130264],"domain_scores_gemma":[0.9993982,0.00008728343,0.000107787266,0.00031363076,0.00003854443,0.00005457293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011041347,0.00010095635,0.0003341381,0.00031289714,0.000015982532,0.0000029966043,0.000107193584,0.00017034607,0.00002138469],"category_scores_gemma":[0.0005935238,0.00008963734,0.00006986136,0.00033563442,0.0001388332,0.000013232028,0.000037227615,0.00013764987,0.0000041838093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017280308,0.00022121063,0.029647108,0.000045859768,0.000013340783,0.000010123416,0.000029986584,0.000006808989,0.95001584,0.00025287978,0.000026395508,0.019713148],"study_design_scores_gemma":[0.001255441,0.00038493265,0.02601368,0.000041364663,0.000045774166,0.0000059773824,0.000028760423,0.00029854584,0.96769774,0.0024222971,0.001695922,0.00010955007],"about_ca_topic_score_codex":0.000013444328,"about_ca_topic_score_gemma":0.0000019555305,"teacher_disagreement_score":0.2540395,"about_ca_system_score_codex":0.000016296473,"about_ca_system_score_gemma":0.00002264479,"threshold_uncertainty_score":0.36553043},"labels":[],"label_agreement":null},{"id":"W2398722085","doi":"10.1007/978-1-60327-545-3_9","title":"Screening for Chemical Inhibitors of Heterologous Proteins Expressed in Yeast Using a Simple Growth-Restoration Assay","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Heterologous; Yeast; Saccharomyces cerevisiae; Heterologous expression; Growth inhibition; Biochemistry; Plasmid; Biology; Gene; Chemistry; Molecular biology; Cell growth; Recombinant DNA","score_opus":0.04052769120756976,"score_gpt":0.4011519517835917,"score_spread":0.3606242605760219,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398722085","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49249205,0.00019848012,0.5068623,0.00004283277,0.000027374208,0.00033068334,0.000015272473,0.0000033558501,0.000027667618],"genre_scores_gemma":[0.5743245,0.0000070579067,0.42540458,0.000076774435,0.00004986757,0.000044246495,0.00007681392,0.0000125088645,0.0000036600798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800026,0.00071056664,0.00039170825,0.000434547,0.000086369866,0.00037656698],"domain_scores_gemma":[0.9994392,0.00004728845,0.00010304929,0.0002558145,0.0000985158,0.00005616518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011417778,0.00016541802,0.00028145997,0.00018296161,0.000023426472,0.000008353154,0.00022559821,0.00035612204,0.000002619117],"category_scores_gemma":[0.0008413777,0.00016546919,0.00010627756,0.00021916545,0.000105457286,0.0000033041078,0.00010945569,0.0001608989,1.8192492e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026287828,0.00009539577,0.0017757844,0.00002149934,0.0000106461575,0.0000037142145,0.00003068789,0.0005009591,0.9886066,0.0001296784,0.0000073571223,0.008554816],"study_design_scores_gemma":[0.0008241143,0.00053548225,0.00026426828,0.000018269919,0.0000053908934,0.0000050571534,0.000018571365,0.0030638026,0.9918372,0.003051715,0.00021712048,0.00015900748],"about_ca_topic_score_codex":0.000042083157,"about_ca_topic_score_gemma":0.000011630771,"teacher_disagreement_score":0.08183246,"about_ca_system_score_codex":0.000022556187,"about_ca_system_score_gemma":0.000060741368,"threshold_uncertainty_score":0.6747638},"labels":[],"label_agreement":null},{"id":"W2398757272","doi":"10.1007/978-1-4939-0944-5_25","title":"A Novel Extraction Protocol to Probe the Role of Cholesterol in Synaptic Vesicle Recycling","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Cholesterol; Dynamin; Membrane; Synaptic vesicle; Vesicle; Organelle; Lipid raft; Cell biology; Chemistry; Biochemistry; Biology; Endocytosis","score_opus":0.016308608918990636,"score_gpt":0.38828737031674404,"score_spread":0.37197876139775343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398757272","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4351622,0.000023596716,0.5534098,0.00013845658,0.00011787187,0.010756846,0.0000027930867,0.0000079560195,0.00038047493],"genre_scores_gemma":[0.5755381,0.0000017535559,0.4107973,0.00046861818,0.00011526059,0.013013581,0.000011094007,0.000030052437,0.000024276342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820936,0.0006872295,0.00037699862,0.00039480897,0.00006091755,0.00027070046],"domain_scores_gemma":[0.9993018,0.00005389667,0.00011722145,0.00044241082,0.000042198775,0.000042470674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001262917,0.00015698455,0.00023398237,0.000107334745,0.00002427518,0.000007986034,0.00027959052,0.00023350303,0.0000054444363],"category_scores_gemma":[0.0004416461,0.000117602074,0.00007181856,0.0002105988,0.00007742197,0.0000030360466,0.00012367852,0.00018911978,0.0000013834405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090533475,0.00007377039,0.0034850305,0.000016237407,0.000010644288,5.0679375e-7,0.00005977532,0.00011883108,0.94753635,0.00029779534,7.6201064e-7,0.048309755],"study_design_scores_gemma":[0.0006623408,0.00034849523,0.0041398983,0.000021343629,0.000009912912,0.000017558425,0.000040978022,0.00012095487,0.98484576,0.0006671604,0.008989657,0.00013592887],"about_ca_topic_score_codex":0.00008311451,"about_ca_topic_score_gemma":0.00007128198,"teacher_disagreement_score":0.14261253,"about_ca_system_score_codex":0.000015010928,"about_ca_system_score_gemma":0.00003442489,"threshold_uncertainty_score":0.47956735},"labels":[],"label_agreement":null},{"id":"W2398797846","doi":"10.1007/978-1-62703-974-1_4","title":"Trichoplax adhaerens, an Enigmatic Basal Metazoan with Potential","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Francis Xavier University; Dalhousie University; University of Guelph","funders":"","keywords":"Biology; Evolutionary biology; Cognitive science; Neuroscience; Psychology","score_opus":0.031935337273995015,"score_gpt":0.40226479662989556,"score_spread":0.37032945935590056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398797846","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5544975,0.00003356678,0.4435193,0.0002046303,0.0002356545,0.00025228816,0.000004333333,0.000058425703,0.0011943596],"genre_scores_gemma":[0.7319801,0.00002002635,0.26497447,0.002730249,0.00006713407,0.000077639954,0.000013134397,0.00003541049,0.00010181569],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9862334,0.011791926,0.00032727083,0.0008774635,0.00009928219,0.0006706608],"domain_scores_gemma":[0.99815637,0.00093643274,0.000100172256,0.00064153754,0.00003728531,0.00012818385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017471741,0.00025757047,0.0004892975,0.000325243,0.00013028504,0.000018806237,0.00065318076,0.00028492065,0.00012637193],"category_scores_gemma":[0.0017737629,0.00019218444,0.000082052306,0.00050738547,0.0006940096,0.00008116819,0.0001668341,0.0006564654,0.000038196642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002014104,0.00011248295,0.0003099146,0.000007837528,0.0000121969615,0.00006271212,0.000035609828,0.00007717653,0.98308647,0.009418604,0.0000095228415,0.0066660563],"study_design_scores_gemma":[0.0009033511,0.0015698234,0.0008809458,0.0000049105984,0.000017339478,0.00010923017,0.000010180107,0.0020125515,0.9664017,0.02731337,0.0005231236,0.00025349672],"about_ca_topic_score_codex":0.000018804532,"about_ca_topic_score_gemma":0.000007691092,"teacher_disagreement_score":0.1785448,"about_ca_system_score_codex":0.000018087878,"about_ca_system_score_gemma":0.000058113495,"threshold_uncertainty_score":0.78370535},"labels":[],"label_agreement":null},{"id":"W2398890826","doi":"10.1007/978-1-62703-992-5_6","title":"Screening Hybridomas for Cell Surface Antigens by High-Throughput Homogeneous Assay and Flow Cytometry","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Flow cytometry; Homogeneous; Monoclonal antibody; High-throughput screening; Computer science; Computational biology; Throughput; Antibody; Cytometry; Work flow; Antigen; Immunology; Biology; Bioinformatics; Mathematics; Engineering","score_opus":0.023109802984699505,"score_gpt":0.39906958194149533,"score_spread":0.37595977895679583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2398890826","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23446137,0.0029500956,0.760862,0.0007438342,0.000111557965,0.00033144077,0.000056246034,0.000021863205,0.00046161702],"genre_scores_gemma":[0.069117084,0.000272379,0.9285023,0.00084226474,0.00009123931,0.000019598676,0.00013984629,0.00003646528,0.0009788065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973593,0.001079016,0.00031847347,0.00054638134,0.00013332118,0.0005635432],"domain_scores_gemma":[0.99829555,0.0010985568,0.00006770953,0.00029276047,0.00007643574,0.00016900235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023219686,0.00022536905,0.00057522114,0.00015039,0.00009159511,0.000014941948,0.00015020894,0.00022669528,0.00003829275],"category_scores_gemma":[0.00061383535,0.00018889716,0.000120020595,0.00023568449,0.00023983324,0.000016134776,0.00016017395,0.0002991094,0.00000511241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024092941,0.00007824465,0.010230986,0.00011441446,0.00006247825,0.00004518435,0.000028869468,0.000038045415,0.933455,0.0004493769,0.00044919623,0.054807298],"study_design_scores_gemma":[0.0023111072,0.001226052,0.0014200232,0.000038567854,0.000057936853,0.00014465734,0.000024640314,0.015897255,0.8973148,0.0027692064,0.07844721,0.00034854116],"about_ca_topic_score_codex":0.00019611948,"about_ca_topic_score_gemma":0.00000517227,"teacher_disagreement_score":0.16764034,"about_ca_system_score_codex":0.000023170835,"about_ca_system_score_gemma":0.000034851386,"threshold_uncertainty_score":0.7703002},"labels":[],"label_agreement":null},{"id":"W2399032539","doi":"10.1007/978-1-4939-1755-6_4","title":"Using Caged Ligands to Study Intracrine Endothelin Signaling in Intact Cardiac Myocytes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Junctions and Nanostructures","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Montreal Heart Institute","funders":"Canadian Institutes of Health Research","keywords":"Intracrine; Cell biology; Receptor; Intracellular; Ligand (biochemistry); Signal transduction; Extracellular; Cell; Chemistry; Biology; Paracrine signalling; Biochemistry","score_opus":0.01856659964200578,"score_gpt":0.3509298571510309,"score_spread":0.3323632575090251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399032539","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51191926,0.00026291446,0.4871945,0.000008768253,0.00030231805,0.00021001372,0.00000214586,0.000038148686,0.00006190462],"genre_scores_gemma":[0.6175007,0.000007642083,0.38231593,0.000066831766,0.000042840726,0.00003052745,0.00000294152,0.00003062374,0.000001918583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99784863,0.0009828336,0.00039397672,0.0003414996,0.00006750933,0.0003655575],"domain_scores_gemma":[0.99935776,0.00018044567,0.00002912069,0.000340044,0.00002391134,0.00006871797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015270993,0.00022774492,0.00044823275,0.00049796555,0.00003485189,0.000018498176,0.00018728462,0.00014692142,0.000022708533],"category_scores_gemma":[0.00041700018,0.00022261842,0.00007756535,0.0005273028,0.000023999659,0.00002013349,0.00008480584,0.00033055563,0.0000028227992],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012019543,0.00002661866,0.0061014867,0.000008946745,0.000043523054,0.00002237257,0.00027611142,0.03635328,0.93130857,0.00019492648,0.0000010518078,0.025651112],"study_design_scores_gemma":[0.0005131287,0.00016952907,0.0013448566,0.000017527349,0.000024479563,0.000006561826,0.00013020389,0.009070878,0.9865113,0.0013877394,0.0005365459,0.0002872388],"about_ca_topic_score_codex":0.0001726385,"about_ca_topic_score_gemma":0.00003894603,"teacher_disagreement_score":0.105581455,"about_ca_system_score_codex":0.000075961994,"about_ca_system_score_gemma":0.000012008744,"threshold_uncertainty_score":0.9078115},"labels":[],"label_agreement":null},{"id":"W2399078551","doi":"10.1007/978-1-60761-938-3_15","title":"Molecular and Functional Characterization of P-Glycoprotein In Vitro","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"P-glycoprotein; Efflux; Blood–brain barrier; Glycoprotein; Biology; In vitro; Western blot; Transport protein; Cell biology; Organic anion-transporting polypeptide; Transporter; Biochemistry; Central nervous system; Chemistry; Multiple drug resistance; Gene; Endocrinology","score_opus":0.028762934426412527,"score_gpt":0.3815277295024692,"score_spread":0.3527647950760567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399078551","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000958202,0.6501515,0.34767768,0.000029304025,0.0002280827,0.0008138352,0.000023568618,0.000010834022,0.000107000655],"genre_scores_gemma":[0.000036701054,0.69780976,0.30109718,0.000071555536,0.000034720033,0.00016924288,0.00067571265,0.0000501242,0.000055011296],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997788,0.00064869545,0.00072998233,0.0004835192,0.00009924068,0.00025056634],"domain_scores_gemma":[0.9992351,0.00006566963,0.00026209388,0.00033122365,0.000043776272,0.000062117135],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010014247,0.00031064573,0.0017535558,0.00057190657,0.000010960255,0.000003449643,0.00009365106,0.0008890913,0.000030071804],"category_scores_gemma":[0.00011937791,0.0002527954,0.00023909079,0.00041282355,0.00014304875,0.000012959016,0.000040264757,0.00071912556,0.0000013051115],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041638934,0.00004072086,0.000008571022,0.0021232618,0.000026535683,0.00007996188,0.00000652434,5.421378e-8,0.5650956,0.00076000154,3.925016e-8,0.43181708],"study_design_scores_gemma":[0.0015951581,0.0002195741,0.00017482914,0.005611554,0.00065096805,0.00018985718,0.0000070547926,0.000021099102,0.45175523,0.0021794336,0.5369738,0.0006214932],"about_ca_topic_score_codex":0.000009294792,"about_ca_topic_score_gemma":0.0000029762912,"teacher_disagreement_score":0.5369737,"about_ca_system_score_codex":0.000037145837,"about_ca_system_score_gemma":0.00017560586,"threshold_uncertainty_score":0.99999243},"labels":[],"label_agreement":null},{"id":"W2399105364","doi":"10.1007/978-1-61779-545-9_23","title":"Target-Induced SOFA-HDV Ribozyme","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Ribozyme; Biology; Mammalian CPEB3 ribozyme; Genetics; RNA; Gene","score_opus":0.02765639246919231,"score_gpt":0.3742250029320968,"score_spread":0.3465686104629045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399105364","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14920877,0.00309796,0.8437228,0.00014982978,0.00068540813,0.00028826247,0.00000671362,0.000024055067,0.0028161784],"genre_scores_gemma":[0.29514346,0.00005360932,0.703392,0.00074653735,0.00026025146,0.00010663227,0.000048396825,0.00004453068,0.00020457145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99678254,0.0015886847,0.0003443152,0.00047479858,0.00008207365,0.0007275645],"domain_scores_gemma":[0.99902856,0.00005935645,0.0001086615,0.0006070643,0.000040753886,0.00015559199],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020454077,0.00027330467,0.00032970452,0.000119624136,0.000057983303,0.000011316277,0.00036469076,0.00052529934,0.00013146606],"category_scores_gemma":[0.00060899096,0.00025655175,0.00016089098,0.00017094068,0.00007937532,0.0000046573664,0.00021912667,0.00018040836,0.000037534337],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003655331,0.00007280276,0.0028846664,0.000007529209,0.000039629518,0.0000044440244,0.000031659234,0.0000037828386,0.9763791,0.0040147356,0.000051016967,0.016474063],"study_design_scores_gemma":[0.00031460042,0.00019750903,0.00035028812,0.0000061504443,0.0000116899455,0.0000233059,0.000027551896,0.000011083117,0.9526697,0.004920514,0.04115557,0.00031208782],"about_ca_topic_score_codex":0.00002272598,"about_ca_topic_score_gemma":0.0000029429907,"teacher_disagreement_score":0.14593467,"about_ca_system_score_codex":0.000021358233,"about_ca_system_score_gemma":0.000046689034,"threshold_uncertainty_score":0.9999887},"labels":[],"label_agreement":null},{"id":"W2399181358","doi":"10.1007/978-1-60327-029-8_27","title":"Application of Membrane Extraction with Sorbent Interface for Breath Analysis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Chemical Sensor Technologies","field":"Engineering","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Breath gas analysis; Sorbent; Chromatography; Analyte; Acetone; Extraction (chemistry); Sample preparation; Chemistry; Adsorption","score_opus":0.010126918595897306,"score_gpt":0.37012986107176243,"score_spread":0.3600029424758651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399181358","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0648936,0.00023220466,0.93443257,0.0000481054,0.000011641383,0.00015641513,0.0000028626005,0.00011964526,0.000102937134],"genre_scores_gemma":[0.45992485,0.000015559266,0.540016,0.000006682429,0.0000020541756,0.00002211318,0.0000060314414,0.0000050605295,0.0000016301841],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99947906,0.000035425917,0.00017035451,0.00016228204,0.000024549456,0.0001283111],"domain_scores_gemma":[0.99961954,0.00009165431,0.000044399952,0.00020907666,0.00002337655,0.000011925828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009694984,0.00008897666,0.00023066271,0.00015567985,0.0000057866614,0.0000014667309,0.0001024483,0.0001267524,0.0000016769319],"category_scores_gemma":[0.00006886957,0.000077114004,0.000051324885,0.0004095223,0.00003814766,0.000015061748,0.000007784206,0.00009233557,1.861135e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016448217,0.000012490406,0.00009180242,0.00000946526,0.000054590677,3.3139767e-7,0.000008039055,0.08061408,0.8502843,0.00083544763,3.3321416e-7,0.06807267],"study_design_scores_gemma":[0.00014188218,0.0000761612,0.00015771881,0.0000030241954,0.000060199436,0.0000017200546,0.000016097452,0.03428838,0.95777833,0.0071821897,0.00021462407,0.00007965191],"about_ca_topic_score_codex":0.000004212613,"about_ca_topic_score_gemma":0.0000031911316,"teacher_disagreement_score":0.39503124,"about_ca_system_score_codex":0.00004094639,"about_ca_system_score_gemma":8.964209e-7,"threshold_uncertainty_score":0.3144618},"labels":[],"label_agreement":null},{"id":"W2399280670","doi":"10.1007/978-1-61779-968-6_27","title":"Multivalent Display of Single-Domain Antibodies","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; National Research Council Canada; Institute for Biological Sciences; University of Ottawa","funders":"","keywords":"Panning (audio); Avidity; Single-domain antibody; Phage display; Antigen; Antibody; Binding affinities; Computational biology; Molecular biology; Chemistry; Biology; Immunology; Biochemistry; Receptor","score_opus":0.061831559006392735,"score_gpt":0.4619030905789481,"score_spread":0.4000715315725553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399280670","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78651965,0.004351332,0.20248204,0.0005976075,0.00021133551,0.000248807,0.000012012209,0.00001330929,0.005563914],"genre_scores_gemma":[0.29704833,0.000103107326,0.70215786,0.00019125595,0.00007260797,0.000012622865,0.000020056832,0.000014436046,0.0003796892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981103,0.00080640323,0.00031725568,0.00019194845,0.000120617144,0.00045345523],"domain_scores_gemma":[0.99921405,0.00031774523,0.00006494408,0.00022918287,0.000052436608,0.000121634825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011978056,0.00013889323,0.0004306952,0.00019116153,0.00002213387,0.0000019210986,0.00010752999,0.00013707145,0.000098270204],"category_scores_gemma":[0.0004260955,0.00010150611,0.00013508186,0.00019186937,0.00030876513,0.000020184872,0.0001385497,0.00020535625,0.000010696438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014812716,0.00027779178,0.17331994,0.00008098737,0.000050939252,0.000020937954,0.00019639127,7.034549e-7,0.80610305,0.007391586,0.000015565689,0.012393958],"study_design_scores_gemma":[0.00079216156,0.00045283203,0.060055315,0.00007596851,0.000027163696,0.0000861328,0.00011772031,0.00004998725,0.9166198,0.0031040595,0.018456751,0.00016215075],"about_ca_topic_score_codex":0.0000750113,"about_ca_topic_score_gemma":0.000002836293,"teacher_disagreement_score":0.49967584,"about_ca_system_score_codex":0.000031291027,"about_ca_system_score_gemma":0.000024899324,"threshold_uncertainty_score":0.41392994},"labels":[],"label_agreement":null},{"id":"W2399364539","doi":"10.1007/978-1-60327-058-8","title":"Structural Proteomics","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":49,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; Institute for Molecular Bioscience, University Of Queensland; University of Oxford; Centre National de la Recherche Scientifique; Macquarie University; Magyar Tudományos Akadémia; University of New South Wales; National Research Council Canada; University of Rochester; Weizmann Institute of Science; University of Toronto; Institut National de la Santé et de la Recherche Médicale; University of Washington; Rutgers, The State University of New Jersey","keywords":"Proteomics; Computational biology; Computer science; Biology; Biochemistry","score_opus":0.02511419222627342,"score_gpt":0.3945200920860125,"score_spread":0.3694058998597391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399364539","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013476204,0.0006673684,0.78879523,0.000041936873,0.000044037337,0.00033463733,0.000061973165,0.00011629619,0.20980376],"genre_scores_gemma":[0.0000042140964,0.000292155,0.891451,0.0001228857,0.00010393582,0.00039054285,0.00030130052,0.00007881969,0.107255146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984282,0.000100705685,0.00045064665,0.0006229945,0.00006099409,0.0003364196],"domain_scores_gemma":[0.9987734,0.00010042012,0.00026782457,0.0007555053,0.00004669508,0.000056135763],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00019146173,0.00035952544,0.0005315042,0.00011610423,0.00005701499,0.000007246981,0.000526621,0.0011124751,0.00016649027],"category_scores_gemma":[0.000106777545,0.00036555092,0.00017214123,0.00007010096,0.00025328618,0.000012436444,0.00023139427,0.0010299727,0.0000083500345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014285842,0.000010373045,0.000033789813,0.00007440151,0.00003446233,0.000039631457,0.000021557,0.00002077421,0.89019287,0.09180901,0.00027476012,0.017474087],"study_design_scores_gemma":[0.00015628399,0.000017211602,5.209248e-7,0.000040699557,0.000012757722,0.00005835144,0.0000012849976,0.0001197607,0.42692232,0.40871012,0.16356827,0.0003924166],"about_ca_topic_score_codex":0.000008873864,"about_ca_topic_score_gemma":0.0000015918002,"teacher_disagreement_score":0.46327057,"about_ca_system_score_codex":0.00024845978,"about_ca_system_score_gemma":0.0001888831,"threshold_uncertainty_score":0.99987966},"labels":[],"label_agreement":null},{"id":"W2399370163","doi":"10.1007/978-1-59745-261-8_27","title":"Dissecting GLUT4 Traffic Components in L6 Myocytes by Fluorescence-Based, Single-Cell Assays","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"GLUT4; Glucose transporter; Internalization; Endocytosis; Exocytosis; Cell biology; Intracellular; Myocyte; Cell; Glucose uptake; Chemistry; Cell membrane; Biology; Insulin; Biochemistry; Secretion; Endocrinology","score_opus":0.032783218115493125,"score_gpt":0.32257211937804336,"score_spread":0.28978890126255025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399370163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8396277,0.08415143,0.07493895,0.000025300353,0.00046246944,0.00026958802,0.000023163233,0.000022902852,0.00047853848],"genre_scores_gemma":[0.71701485,0.005138792,0.2761378,0.00077716267,0.00018757873,0.0001313035,0.0004079715,0.000087185916,0.00011733988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99658346,0.0012645711,0.00052764715,0.000804994,0.00012713681,0.00069217535],"domain_scores_gemma":[0.9990428,0.000112656984,0.00015707953,0.00049492146,0.000075556956,0.000116982876],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00096242124,0.0003488552,0.0004999402,0.00018485829,0.00007792115,0.000013354216,0.00042701722,0.0004660245,0.00002979092],"category_scores_gemma":[0.00045829517,0.0003519411,0.00016625863,0.00033379908,0.0002770518,0.000004554548,0.00012201486,0.00032018078,0.000005407817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077081466,0.00029448478,0.005863455,0.000023723462,0.000018792836,0.00002555885,0.000048620863,0.00046573384,0.9610311,0.000024383438,0.00014837792,0.03197869],"study_design_scores_gemma":[0.0015615996,0.00026350815,0.0004443667,0.000025014324,0.000013026076,0.000009975042,0.00003880793,0.00067416637,0.9667089,0.00014244636,0.029688247,0.0004299499],"about_ca_topic_score_codex":0.000066257126,"about_ca_topic_score_gemma":0.000028883058,"teacher_disagreement_score":0.20119886,"about_ca_system_score_codex":0.000058035825,"about_ca_system_score_gemma":0.000085938926,"threshold_uncertainty_score":0.99989325},"labels":[],"label_agreement":null},{"id":"W2399373193","doi":"10.1007/978-1-61779-516-9_7","title":"Case Study: Ancient Sloth DNA Recovered from Hairs Preserved in Paleofeces","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Sloth; Ancient DNA; DNA; Biology; Evolutionary biology; Zoology; Genetics; Paleontology; Medicine","score_opus":0.0767752107518215,"score_gpt":0.4083830613214132,"score_spread":0.33160785056959174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399373193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9342118,0.0012066765,0.061936684,0.00002867957,0.00026471773,0.00059090205,0.000028267388,0.000009812005,0.0017224507],"genre_scores_gemma":[0.7218633,0.000067050634,0.27738836,0.00021542491,0.00006056586,0.00014114933,0.00007947251,0.00003136271,0.00015326859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957282,0.0023280552,0.00045660406,0.00083640707,0.0001063521,0.00054439314],"domain_scores_gemma":[0.9988637,0.000078164914,0.000088554574,0.00079531444,0.00006442309,0.00010987139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016851135,0.00024520702,0.00036201582,0.0001791872,0.00004101767,0.000012486147,0.00041860098,0.00032980784,0.00013487662],"category_scores_gemma":[0.00056035566,0.00022428203,0.00010352781,0.0002832744,0.00022735585,0.0000031402685,0.0003259481,0.00024021266,0.000008815492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024330243,0.0004033986,0.118556514,0.000008891058,0.00008320154,0.0017397001,0.00074028707,0.000023670078,0.85926545,0.00003702789,0.00010557162,0.018792957],"study_design_scores_gemma":[0.003963322,0.0028695613,0.02743191,0.00002411832,0.00003491184,0.00026222688,0.004094034,0.0003766186,0.9496086,0.0038158877,0.0067443284,0.0007744357],"about_ca_topic_score_codex":0.0038193997,"about_ca_topic_score_gemma":0.0033854572,"teacher_disagreement_score":0.2154517,"about_ca_system_score_codex":0.00002460542,"about_ca_system_score_gemma":0.000092048154,"threshold_uncertainty_score":0.9145956},"labels":[],"label_agreement":null},{"id":"W2399397492","doi":"10.1007/978-1-61779-376-9_29","title":"Reconstitution of Active and Stoichiometric Multisubunit Lysine Acetyltransferase Complexes in Insect Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Acetylation; Lysine; Biochemistry; Biology; Acetyltransferase; Acetyltransferases; Histone; Histone Acetyltransferases; Ubiquitin; Histone acetyltransferase; Function (biology); Ubiquitins; Active site; Cell biology; Chemistry; Amino acid; Ubiquitin ligase; Enzyme; Gene","score_opus":0.04544089962192658,"score_gpt":0.3499064361499702,"score_spread":0.3044655365280436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399397492","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63565767,0.00052088505,0.36297104,0.000012850855,0.00008101313,0.00020798366,0.00001564321,0.000004244751,0.0005286705],"genre_scores_gemma":[0.68899304,0.00024007681,0.31059211,0.00007571318,0.000010553223,0.000022560656,0.000042204334,0.000009444657,0.0000143151865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983323,0.0007874152,0.00032145396,0.00033184496,0.000039441013,0.00018753056],"domain_scores_gemma":[0.9995659,0.000041497886,0.0000853506,0.00021622276,0.000047411086,0.00004361261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005518853,0.00014338882,0.00025743496,0.00047845583,0.000019504498,0.0000027972444,0.00012865971,0.000222916,0.000026717735],"category_scores_gemma":[0.0003058935,0.00014063243,0.000052459694,0.0004945764,0.00027364522,0.0000049232617,0.000072685645,0.0001353568,7.745597e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001236934,0.00009612851,0.004146897,0.000013807234,0.000020311492,0.0000040495806,0.000106904285,0.0000058630208,0.9575433,0.00068019883,0.0000024014148,0.037256405],"study_design_scores_gemma":[0.0008512424,0.00031006927,0.0033627518,0.000013668251,0.000007735853,0.000009508809,0.00005464194,0.000042398246,0.9939655,0.0007203642,0.000515716,0.00014639371],"about_ca_topic_score_codex":0.0002813186,"about_ca_topic_score_gemma":0.00011432902,"teacher_disagreement_score":0.05333535,"about_ca_system_score_codex":0.000015204256,"about_ca_system_score_gemma":0.000042656196,"threshold_uncertainty_score":0.5734824},"labels":[],"label_agreement":null},{"id":"W2399497054","doi":"10.1007/978-1-61779-851-1_14","title":"Investigating Primary Cilia in Cultured Metanephric Mesenchymal Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Mesenchyme; Cilium; Ureteric bud; Ingression; Cell biology; Embryonic stem cell; Biology; Vertebrate; Morphogenesis; Primary culture; Mesenchymal stem cell; Ultrastructure; Anatomy; Cell culture; Kidney development; Embryogenesis; Embryo; Gastrulation; Genetics; Gene","score_opus":0.017791069292118617,"score_gpt":0.35187035971417674,"score_spread":0.33407929042205814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399497054","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7011414,0.013193165,0.2805316,0.0001557015,0.0006168736,0.0004981312,0.000024957126,0.000024906825,0.0038132654],"genre_scores_gemma":[0.19988419,0.00012573118,0.7977591,0.0016523117,0.00014028308,0.00008428905,0.00015118449,0.000033807817,0.0001690846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996831,0.0014777023,0.00042994888,0.000490235,0.000093879855,0.00067726243],"domain_scores_gemma":[0.99913985,0.000053284595,0.00010672826,0.0004328073,0.000038604834,0.00022871327],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012414181,0.0002759672,0.0003647133,0.00014730282,0.00003529739,0.000010620089,0.00029881575,0.00037610403,0.000029585706],"category_scores_gemma":[0.00066334364,0.00025638167,0.00013316952,0.00033001095,0.00018671052,0.0000049660594,0.00024231432,0.00020956021,0.000009998586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016257598,0.0000978756,0.023910206,0.000024573932,0.000030436837,0.000005758138,0.00009155706,0.000047054396,0.9731845,0.00018231556,0.00016511139,0.0022443412],"study_design_scores_gemma":[0.0006846611,0.00011467902,0.009432033,0.000014457082,0.000028592782,0.00001877387,0.000100724115,0.000037664777,0.9762605,0.0013031703,0.0116314525,0.00037332345],"about_ca_topic_score_codex":0.000037691756,"about_ca_topic_score_gemma":0.000009451559,"teacher_disagreement_score":0.51722753,"about_ca_system_score_codex":0.000035150806,"about_ca_system_score_gemma":0.000114815346,"threshold_uncertainty_score":0.99998885},"labels":[],"label_agreement":null},{"id":"W2399505870","doi":"10.1007/978-1-61779-591-6_15","title":"DNA Mini-barcodes","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Genomics Institute; Genome Canada","keywords":"Barcode; DNA barcoding; Biology; DNA sequencing; Computational biology; Identification (biology); Mitochondrial DNA; DNA; Adulterant; Polymerase chain reaction; DNA extraction; Genetics; Gene; Evolutionary biology; Computer science; Botany","score_opus":0.04186713034406389,"score_gpt":0.4230008991379498,"score_spread":0.38113376879388594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399505870","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16364004,0.001688606,0.82948536,0.00027646855,0.0006879134,0.00017684812,0.00000804552,0.000020846592,0.004015852],"genre_scores_gemma":[0.50161326,0.0000739849,0.49632972,0.00070149754,0.00015967766,0.00008309439,0.00015647597,0.000027708194,0.0008545912],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806076,0.0008650789,0.00030951624,0.00033749183,0.00005468836,0.00037244917],"domain_scores_gemma":[0.9992049,0.00003763697,0.00009108477,0.0005217054,0.000056525812,0.00008815917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013658614,0.0001464643,0.00015900265,0.00011980228,0.000046902096,0.000012512845,0.00025721017,0.00024498472,0.000077766796],"category_scores_gemma":[0.0004944168,0.00014592978,0.00009046861,0.00018441927,0.00014588812,0.0000035177966,0.000099651814,0.000106075066,0.000055744713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012420554,0.000079409074,0.006075876,0.0000058520386,0.000019794954,3.7027516e-7,0.000043774693,0.0000031361394,0.97388506,0.014227355,0.00032955696,0.005317399],"study_design_scores_gemma":[0.0002184056,0.00004475302,0.0027025645,0.0000026779069,0.000007421157,0.000011628741,0.000050943076,0.000012707569,0.8649016,0.00052650046,0.1313511,0.0001696806],"about_ca_topic_score_codex":0.0000060259504,"about_ca_topic_score_gemma":0.000003097982,"teacher_disagreement_score":0.3379732,"about_ca_system_score_codex":0.000012838484,"about_ca_system_score_gemma":0.00002872999,"threshold_uncertainty_score":0.59508437},"labels":[],"label_agreement":null},{"id":"W2399590689","doi":"10.1007/978-1-4939-0799-1_19","title":"Detection of Protein Posttranslational Modifications from Whole-Cell Extracts in Saccharomyces cerevisiae","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"SUMO protein; Saccharomyces cerevisiae; Ubiquitin; Cell biology; Yeast; Biology; Phosphorylation; Function (biology); Biochemistry; Model organism; Cell; SUMO enzymes; F-box protein; Computational biology; Chemistry; Ubiquitin ligase; Gene","score_opus":0.018778072610198464,"score_gpt":0.3308042501378653,"score_spread":0.3120261775276668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399590689","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4374505,0.0005787099,0.5612588,0.00006342566,0.000054849534,0.00024028246,0.00001687648,0.000007285592,0.00032926584],"genre_scores_gemma":[0.6209979,0.000011004642,0.37870798,0.00004930628,0.000027182903,0.00006840806,0.00009393813,0.000015979242,0.000028299759],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974957,0.0012591219,0.00044129943,0.0004959963,0.00007747148,0.00023041847],"domain_scores_gemma":[0.99921787,0.00007644631,0.00016139526,0.00044018068,0.000059282396,0.00004482395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096079917,0.00017065731,0.00025948483,0.0001707183,0.00002145398,0.0000067184537,0.00024717572,0.0003490091,0.000015827032],"category_scores_gemma":[0.00035953286,0.00018040989,0.00009545016,0.00019686781,0.00008106583,0.000004445999,0.00006395274,0.00016318404,0.000004452745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004439026,0.000097551914,0.0005094079,0.00001430275,0.00001255516,0.0000010377415,0.00003170582,0.00017957005,0.98016983,0.0008242064,8.05039e-7,0.018114606],"study_design_scores_gemma":[0.0005986798,0.00021046375,0.0017021287,0.000018414597,0.0000089817195,0.0000021178525,0.00001912737,0.0010357986,0.9835886,0.010628453,0.0020141196,0.00017313202],"about_ca_topic_score_codex":0.00013211287,"about_ca_topic_score_gemma":0.00008425654,"teacher_disagreement_score":0.1835474,"about_ca_system_score_codex":0.000017753833,"about_ca_system_score_gemma":0.00004485963,"threshold_uncertainty_score":0.7356902},"labels":[],"label_agreement":null},{"id":"W2399674092","doi":"10.1007/978-1-62703-230-8_7","title":"Purification and Stable Isotope Labeling of the Calcium- and Integrin-Binding Protein 1 for Structural and Functional NMR Studies","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Calcium-binding protein; Integrin; Chemistry; Calcium; Isotope; Isotopes of calcium; Stable isotope ratio; Biophysics; Biochemistry; Biology; Organic chemistry; Receptor; Physics","score_opus":0.08351061750056574,"score_gpt":0.4122239969249341,"score_spread":0.3287133794243684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399674092","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9017206,0.0047219205,0.09259688,0.00028347265,0.00018480646,0.00046406154,0.000004288056,0.0000058361584,0.00001817263],"genre_scores_gemma":[0.40137362,0.00013409353,0.5979422,0.00021875443,0.00006966931,0.0000971718,0.000009974276,0.000010637679,0.00014392438],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99915504,0.00033212724,0.00017419404,0.00016362924,0.00002898452,0.00014601999],"domain_scores_gemma":[0.99952877,0.00020211683,0.00007452813,0.00009936313,0.00006354742,0.000031652675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007065583,0.000085959546,0.00023698699,0.000066601926,0.000059956546,0.0000023676491,0.000020449372,0.000102461236,0.000004837369],"category_scores_gemma":[0.0006560852,0.000055097797,0.000023712411,0.000081513586,0.00021276715,0.000023199958,0.0000640309,0.00012758958,8.54278e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010735072,0.000008987535,0.01913973,0.00010796321,0.000040331663,1.4533373e-7,0.00023633771,0.0000017032432,0.9690552,0.0051982584,0.000004329229,0.0060996828],"study_design_scores_gemma":[0.0021716594,0.0005528694,0.04138752,0.00012417127,0.0001268307,0.000098525416,0.0014921046,0.0005625728,0.9421734,0.008772919,0.0023426816,0.00019472356],"about_ca_topic_score_codex":0.000010639916,"about_ca_topic_score_gemma":0.0000021424148,"teacher_disagreement_score":0.5053453,"about_ca_system_score_codex":0.000016928125,"about_ca_system_score_gemma":0.0000165332,"threshold_uncertainty_score":0.2246823},"labels":[],"label_agreement":null},{"id":"W2399712925","doi":"10.1007/978-1-59745-513-8_6","title":"Electro-Formation and Fluorescence Microscopy of Giant Vesicles With Coexisting Liquid Phases","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Vesicle; Fluorescence microscope; Microscopy; Fluorescence; Biophysics; Materials science; Chemistry; Nanotechnology; Optics; Biology; Physics; Membrane; Biochemistry","score_opus":0.013851889320441658,"score_gpt":0.3687519576012065,"score_spread":0.3549000682807648,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399712925","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6324426,0.000393813,0.36689627,0.000014442784,0.000037045927,0.00010636628,0.0000037768914,0.0000047139033,0.000100992496],"genre_scores_gemma":[0.5280933,0.00005910236,0.47166207,0.000093784925,0.000033935776,0.0000054107145,0.0000333,0.000010933944,0.000008148301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989228,0.00019430809,0.00027931787,0.00027900777,0.00004901482,0.0002755556],"domain_scores_gemma":[0.9995288,0.000040275256,0.00012249147,0.00020214627,0.000060556496,0.000045678964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069564115,0.00014590264,0.0002058769,0.00009146661,0.000032250293,0.0000056265985,0.000117595366,0.00016326795,0.0000034551267],"category_scores_gemma":[0.00013579756,0.00011797132,0.000034933888,0.00013605726,0.00021348514,0.0000039267024,0.000058859954,0.0001032767,1.4344269e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037377476,0.000026459007,0.000802002,0.00002539318,0.000012935037,0.000008211945,0.000047067013,0.000002132048,0.98123837,0.00019738343,0.000002480168,0.017263822],"study_design_scores_gemma":[0.0005040152,0.00097101746,0.0007626099,0.000021687507,0.000019467807,0.000078556855,0.00005257364,0.000008993753,0.99675226,0.000063577536,0.00062082446,0.00014442329],"about_ca_topic_score_codex":0.000023417546,"about_ca_topic_score_gemma":0.000016231887,"teacher_disagreement_score":0.10476581,"about_ca_system_score_codex":0.000009109562,"about_ca_system_score_gemma":0.00003436386,"threshold_uncertainty_score":0.4810731},"labels":[],"label_agreement":null},{"id":"W2399759600","doi":"10.1007/978-1-59745-467-4_19","title":"Assessment of Phagosome Formation and Maturation by Fluorescence Microscopy","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Phagosome; Phagocytosis; Antibody opsonization; Fluorescence microscope; Fluorescence; Microscopy; Cell biology; Biophysics; Internalization; Biology; Opsonin; Chemistry; Cell; Biochemistry; Pathology; Optics","score_opus":0.022940739339566283,"score_gpt":0.47924736088996983,"score_spread":0.4563066215504035,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399759600","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23685949,0.00050819793,0.76161194,0.00014698878,0.000035998826,0.00026358268,0.0000023636474,0.000007753503,0.00056369253],"genre_scores_gemma":[0.17279837,0.0001232756,0.8268422,0.00013031221,0.000007645604,0.000008357834,0.00004212631,0.000008952049,0.000038758],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987247,0.0003956613,0.00033875054,0.00020572866,0.00011639529,0.00021876695],"domain_scores_gemma":[0.99941736,0.00017024131,0.00008332677,0.00018858019,0.00007585074,0.00006461591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017830722,0.00009012121,0.00023091074,0.00022534869,0.000017714014,0.00000508539,0.00006694202,0.00014210283,0.000024031257],"category_scores_gemma":[0.00027543426,0.00007949634,0.000033261065,0.00023809182,0.00012885456,0.00002907248,0.0000643862,0.00019871989,0.0000010639719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072738854,0.00005327663,0.004321622,0.00006739607,0.000007650097,0.000014417531,0.000034721827,4.6702004e-7,0.9603745,0.000679236,0.000024735715,0.03434927],"study_design_scores_gemma":[0.0006499396,0.0002776449,0.01793066,0.000026105832,0.000009120963,0.000032309337,0.000039907423,0.00093851757,0.97877806,0.00055920664,0.00069512695,0.0000633838],"about_ca_topic_score_codex":0.000020732852,"about_ca_topic_score_gemma":0.0000018476696,"teacher_disagreement_score":0.06523027,"about_ca_system_score_codex":0.000065115004,"about_ca_system_score_gemma":0.000036637437,"threshold_uncertainty_score":0.32417667},"labels":[],"label_agreement":null},{"id":"W2399807898","doi":"10.1007/978-1-4939-0928-5_4","title":"Enhanced ELISA Based on Carboxymethylated Dextran Coatings","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Dextran; Adsorption; Diluent; Chromatography; Chemistry; Covalent bond; Substrate (aquarium); Buffer (optical fiber); Antibody; Layer (electronics); Antigen; Chemical engineering; Nuclear chemistry; Immunology; Organic chemistry; Biology; Computer science","score_opus":0.02776140267377126,"score_gpt":0.4314474473363721,"score_spread":0.40368604466260083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399807898","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17945985,0.0001821317,0.8014786,0.0014214442,0.00012502605,0.00027085145,0.0000036823897,0.000038310613,0.017020056],"genre_scores_gemma":[0.4335922,0.00001823339,0.56209004,0.003767757,0.00006484776,0.000038379992,0.000042735563,0.000024332383,0.00036146725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971813,0.0015332596,0.00029768175,0.00040652693,0.00015746235,0.00042379388],"domain_scores_gemma":[0.9986218,0.0007847665,0.00005455939,0.00033154743,0.00007363207,0.00013366119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015978775,0.00018409622,0.00043141624,0.00025235853,0.000041136223,0.000006493173,0.00015129676,0.0002191959,0.0001804807],"category_scores_gemma":[0.0013546709,0.00014416856,0.00012653062,0.0003149973,0.00017269904,0.0000075771172,0.000045915378,0.00044231303,0.000025119662],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032013716,0.000083350606,0.002608519,0.0000368724,0.000016683,0.000027439793,0.00003501613,0.00005207694,0.9285411,0.0027403173,0.000014040522,0.065524414],"study_design_scores_gemma":[0.0014078907,0.0010342957,0.0031117804,0.000063463995,0.000018710201,0.0000086885975,0.000008778381,0.013120083,0.9696379,0.0026871776,0.008714013,0.00018722701],"about_ca_topic_score_codex":0.00015885156,"about_ca_topic_score_gemma":0.000008307573,"teacher_disagreement_score":0.25413233,"about_ca_system_score_codex":0.000038840568,"about_ca_system_score_gemma":0.000059463247,"threshold_uncertainty_score":0.58790237},"labels":[],"label_agreement":null},{"id":"W2399850198","doi":"10.1007/978-1-61779-364-6_16","title":"Time-Controlled Transcardiac Perfusion Crosslinking for In Vivo Interactome Studies","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Occupational Cancer Research Centre","funders":"Medical Research Council; Canadian Institutes of Health Research; Wellcome Trust","keywords":"Chemistry; Interactome; Chromatography; In vivo; Reagent; Perfusion; Trypsin; Elution; Proteolysis; Biochemistry; Biology; Enzyme; Organic chemistry","score_opus":0.03425695829191058,"score_gpt":0.40755806108020204,"score_spread":0.37330110278829143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2399850198","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75611585,0.00567588,0.23516771,0.000041927506,0.00071057974,0.0009401556,0.000024397961,0.000021479187,0.0013020401],"genre_scores_gemma":[0.68948483,0.0006612453,0.30720478,0.00087509624,0.00020653386,0.0010104488,0.0000513084,0.00007120507,0.0004345455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976523,0.0008704569,0.00047367002,0.0005593856,0.000049232036,0.00039495606],"domain_scores_gemma":[0.99927396,0.00012860095,0.000116340736,0.00032899991,0.000093564566,0.000058516656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011552828,0.0002473706,0.0005588943,0.00018817057,0.00006262441,0.000010083051,0.00021772235,0.00029934375,0.00006982737],"category_scores_gemma":[0.0007084973,0.00021197498,0.0003503815,0.00014211843,0.00015307024,0.0000044595395,0.00013348696,0.00013602035,0.000002824405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010520511,0.00012207398,0.0019565418,0.0000243099,0.00009674747,0.00000738495,0.00037734548,0.000054156288,0.9924356,0.00014536512,0.00010950898,0.003618957],"study_design_scores_gemma":[0.004704676,0.00083032984,0.0002552534,0.000056746787,0.00003993017,0.0000080048585,0.00017010412,0.00028374916,0.9837119,0.0057767294,0.003807152,0.0003554523],"about_ca_topic_score_codex":0.0000261837,"about_ca_topic_score_gemma":0.000024432306,"teacher_disagreement_score":0.07203707,"about_ca_system_score_codex":0.000027310585,"about_ca_system_score_gemma":0.0000409276,"threshold_uncertainty_score":0.8644089},"labels":[],"label_agreement":null},{"id":"W2400032365","doi":"10.1007/978-1-59745-490-2_14","title":"Structure Determination of the Motor Domain of Yeast Kinesin Kar3 by X-Ray Crystallography","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"","keywords":"Kinesin; Microtubule; Molecular motor; Motor protein; ATP hydrolysis; Organelle; Biophysics; Chemistry; Crystallography; Biochemistry; Biology; Cell biology; Enzyme; ATPase","score_opus":0.00496385604485683,"score_gpt":0.30746146939687213,"score_spread":0.3024976133520153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400032365","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.412342,0.0007830739,0.5864602,0.00001690472,0.000118139746,0.00015478092,0.000058404923,0.000002421011,0.00006409111],"genre_scores_gemma":[0.5662178,0.000044343116,0.4335021,0.00009090236,0.00002619745,0.000005614632,0.00007111039,0.00001654757,0.000025383413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850494,0.0005376634,0.00037711443,0.00029154826,0.00006741232,0.00022133067],"domain_scores_gemma":[0.9993055,0.00004680402,0.00016377318,0.00038851297,0.00006663644,0.000028795634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079682586,0.0001504388,0.00022055619,0.00012460674,0.000020670974,0.0000035489654,0.00031905386,0.0003573045,0.000008227833],"category_scores_gemma":[0.00014497474,0.00011729932,0.00016655374,0.00026106814,0.00024964422,0.0000019652928,0.00010719399,0.00011854899,4.8430728e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044340442,0.000035955945,0.0021024968,0.00003053535,0.000025956899,0.000001624117,0.000035361758,0.000007674457,0.9841427,0.00038698124,0.000014615488,0.013171713],"study_design_scores_gemma":[0.0002881607,0.00015120271,0.0023303528,0.000016129845,0.000013804173,0.00000970104,0.000026980457,0.000041519408,0.98935086,0.0012264804,0.0064232177,0.00012156875],"about_ca_topic_score_codex":0.000032512256,"about_ca_topic_score_gemma":0.000045010653,"teacher_disagreement_score":0.15387578,"about_ca_system_score_codex":0.00001138641,"about_ca_system_score_gemma":0.000037472826,"threshold_uncertainty_score":0.47833276},"labels":[],"label_agreement":null},{"id":"W2400048238","doi":"10.1007/978-1-4939-3372-3_3","title":"In Silico Methods to Identify Exapted Transposable Element Families","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University and Génome Québec Innovation Centre; McGill Genome Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Transposable element; In silico; Endogenous retrovirus; Computational biology; Biology; Genome; Genetics; Retrovirus; Gene","score_opus":0.03347481437731699,"score_gpt":0.4003155566115379,"score_spread":0.3668407422342209,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400048238","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6127275,0.00025779146,0.3797086,0.005961624,0.0002760187,0.00040266328,0.000032486518,0.00003188559,0.0006014242],"genre_scores_gemma":[0.09585915,0.000073088806,0.9025,0.0011167544,0.0000628505,0.00015145443,0.000014013487,0.0000021115475,0.00022059462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99708086,0.0016473286,0.0003716012,0.0004470936,0.00006545836,0.00038768206],"domain_scores_gemma":[0.9991209,0.00061358203,0.000045026143,0.00010490542,0.000035213885,0.00008038487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014883631,0.00015210455,0.00027314873,0.000062942425,0.000042391108,0.0000130851695,0.00029957743,0.00015659088,0.0006579621],"category_scores_gemma":[0.00035636607,0.000056420595,0.000083723,0.00063810585,0.000056262317,0.00003508688,0.00009464292,0.00008420793,0.000027408114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012399329,0.000044968743,0.0048919134,0.0000014374418,0.0000063443745,0.0000048435336,0.00006807234,0.0000074596064,0.79375744,0.0016382225,0.000008138938,0.19955876],"study_design_scores_gemma":[0.00043329745,0.00032201703,0.07971849,0.00002539056,0.000009485318,0.0000048134116,0.00010944868,0.000041456246,0.81849337,0.041683935,0.058863908,0.00029438568],"about_ca_topic_score_codex":0.0003189479,"about_ca_topic_score_gemma":0.0010618797,"teacher_disagreement_score":0.5227914,"about_ca_system_score_codex":0.000044419274,"about_ca_system_score_gemma":0.000009613441,"threshold_uncertainty_score":0.7204224},"labels":[],"label_agreement":null},{"id":"W2400237868","doi":"10.1007/978-1-61779-160-4_18","title":"Visualizing Receptor Endocytosis and Trafficking","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Internalization; G protein-coupled receptor; Endocytosis; Receptor; Cell biology; Endosome; Transmembrane domain; Transmembrane protein; Small molecule; Chemistry; Biology; Signal transduction; Biochemistry","score_opus":0.039935925370151344,"score_gpt":0.37355079054422663,"score_spread":0.3336148651740753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400237868","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32267725,0.0015673933,0.6742592,0.0000143157,0.00020922581,0.00012714653,0.0000025675329,0.000015493937,0.0011274323],"genre_scores_gemma":[0.22750092,0.00024803274,0.7717885,0.00027491577,0.00005908098,0.000033860553,0.000020972728,0.00003129223,0.00004245164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981167,0.000696569,0.00028314983,0.00051183824,0.00004514392,0.00034660916],"domain_scores_gemma":[0.99953115,0.00003168755,0.00008008194,0.00024767857,0.000032118285,0.00007727321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009668889,0.00019322595,0.0002462077,0.000114249735,0.00005193766,0.0000115966595,0.00017856354,0.00027329847,0.00012634044],"category_scores_gemma":[0.0002123084,0.00018722686,0.000083276536,0.00012157434,0.000097940254,0.0000028054103,0.00015488194,0.000136654,0.0000028514148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037126953,0.000028426355,0.0010474233,0.0000079222455,0.000030181736,0.0000049668784,0.00018838095,0.0000030290835,0.9638176,0.0034580997,0.000009888028,0.031366967],"study_design_scores_gemma":[0.00035123026,0.00029105193,0.0000877061,0.000012961832,0.000010570871,0.000017934097,0.0001401925,0.00006777996,0.9908147,0.0017869042,0.006185193,0.00023380943],"about_ca_topic_score_codex":0.000040934327,"about_ca_topic_score_gemma":0.000006556899,"teacher_disagreement_score":0.09752929,"about_ca_system_score_codex":0.000011104736,"about_ca_system_score_gemma":0.000023634419,"threshold_uncertainty_score":0.76348895},"labels":[],"label_agreement":null},{"id":"W2400311182","doi":"10.1007/978-1-59745-521-3_12","title":"Measuring mtDNA Damage Using a Supercoiling-Sensitive qPCR Approach","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Mitochondrial DNA; DNA supercoil; Biology; LNCaP; DNA damage; Molecular biology; DNA; Gene; Real-time polymerase chain reaction; DNA repair; Computational biology; Genetics; Cancer; DNA replication; Prostate cancer","score_opus":0.05845596179202423,"score_gpt":0.36692378432369943,"score_spread":0.3084678225316752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400311182","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17930941,0.00040678045,0.81587905,0.00006452629,0.00035560556,0.00022890492,0.000005881165,0.0000220996,0.003727763],"genre_scores_gemma":[0.07649631,0.000042317304,0.92154765,0.0014129569,0.00023444176,0.000013768398,0.00010395198,0.000029588953,0.000118995275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964925,0.0017896782,0.00037749612,0.000770495,0.00007742746,0.0004923943],"domain_scores_gemma":[0.99915165,0.000039212802,0.00008557057,0.0005324788,0.00009017396,0.00010091404],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001191638,0.000281688,0.0003867817,0.00019798173,0.00007773079,0.000016240418,0.00024233919,0.0005210075,0.00001556421],"category_scores_gemma":[0.0006220713,0.00028176766,0.00016855061,0.00026284225,0.00014405207,0.0000039473575,0.00011581845,0.00029885973,0.000004954657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011182001,0.00007745837,0.0005137656,0.0000060041107,0.00002610638,0.000031764943,0.00007384193,0.0004324971,0.992736,0.0012514389,0.000014578631,0.0047247484],"study_design_scores_gemma":[0.00090460235,0.0004615254,0.00041370591,0.000011908942,0.000028887876,0.00018595764,0.00012069067,0.0019224222,0.9903869,0.0016653808,0.0034614124,0.00043659075],"about_ca_topic_score_codex":0.000028478267,"about_ca_topic_score_gemma":0.00000765038,"teacher_disagreement_score":0.10566864,"about_ca_system_score_codex":0.00003345241,"about_ca_system_score_gemma":0.00007442119,"threshold_uncertainty_score":0.99996346},"labels":[],"label_agreement":null},{"id":"W2400314897","doi":"10.1007/978-1-4939-2428-8_15","title":"Randomized Controlled Trials 7: Analysis and Interpretation of Quality-of-Life Scores","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Quality of life (healthcare); Randomized controlled trial; Missing data; Medicine; Clinical trial; Psychology; Clinical psychology; Physical therapy; Statistics; Psychotherapist; Mathematics; Pathology","score_opus":0.4751903014124643,"score_gpt":0.5861284741638376,"score_spread":0.1109381727513733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400314897","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14086512,0.008713819,0.84663796,0.0018576995,0.00021868048,0.0010160041,0.000046975096,0.000007180163,0.0006365391],"genre_scores_gemma":[0.48546523,0.00015487305,0.51265347,0.0014422693,0.000029384664,0.0001919225,0.000025940553,0.000011369627,0.000025537638],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9549568,0.03325341,0.011124583,0.00041202645,0.000058455713,0.00019468169],"domain_scores_gemma":[0.9682867,0.023845097,0.0072411043,0.00037272702,0.0001405516,0.000113817405],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.28813127,0.00015318365,0.009384957,0.0012161295,0.00001536654,0.000011667199,0.00016651758,0.00020392869,0.00005496613],"category_scores_gemma":[0.27706373,0.00014212097,0.00070427015,0.00041501454,0.00025876245,0.000060632025,0.0000529359,0.0000988811,0.000005649345],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.05092681,0.0001802797,0.11732094,0.00043306316,0.007161292,5.7209024e-7,0.0045516766,0.0021117544,0.0026763058,0.8126209,0.00006590539,0.0019505271],"study_design_scores_gemma":[0.3622714,0.00020727485,0.0037613125,0.00007038662,0.0006241284,7.7257687e-7,0.0010451109,0.09635125,0.0011231445,0.5338982,0.00016795588,0.00047907876],"about_ca_topic_score_codex":0.001505557,"about_ca_topic_score_gemma":0.00007623176,"teacher_disagreement_score":0.3446001,"about_ca_system_score_codex":0.00007023868,"about_ca_system_score_gemma":0.0001260526,"threshold_uncertainty_score":0.73301864},"labels":[],"label_agreement":null},{"id":"W2400393226","doi":"10.1007/978-1-62703-152-3_10","title":"Flux Measurements of Cations Using Radioactive Tracers","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"TRACER; Tracing; Flux (metallurgy); Potassium; Radioactive tracer; Radiochemistry; Ion; Chemistry; Focus (optics); Environmental science; Environmental chemistry; Analytical Chemistry (journal); Nuclear physics; Physics; Computer science; Optics","score_opus":0.11711665608553884,"score_gpt":0.38538034996533743,"score_spread":0.2682636938797986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400393226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9485542,0.0029001704,0.046370145,0.00008212648,0.00031386144,0.00017045687,0.00002079969,0.000009711243,0.0015784961],"genre_scores_gemma":[0.52888304,0.00004842247,0.47073492,0.0001306195,0.000091082504,0.000014016867,0.000047312617,0.0000010882052,0.000049508046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985962,0.0007469154,0.00019205986,0.00014062412,0.00006228506,0.00026194396],"domain_scores_gemma":[0.9996425,0.00013656131,0.000088225104,0.000048531896,0.000027680328,0.000056517852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010142528,0.00008610427,0.00019757342,0.000030125342,0.00003597591,0.0000027385097,0.00012764482,0.00010892514,0.000073785945],"category_scores_gemma":[0.00015831091,0.00003766905,0.000066707864,0.00029366644,0.000058678335,0.00004560007,0.000028908511,0.00008023766,0.000002557635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007964757,0.00006645662,0.018005194,9.483065e-7,0.000014052712,3.062709e-7,0.00007166674,0.000006256777,0.92487836,0.001024945,0.000004467905,0.055919398],"study_design_scores_gemma":[0.00016811788,0.0000468614,0.030216055,0.000007789555,0.000029948706,0.000008227527,0.00012793571,0.00003888137,0.9529541,0.0008917515,0.015375636,0.0001346543],"about_ca_topic_score_codex":0.00010010345,"about_ca_topic_score_gemma":0.000013115239,"teacher_disagreement_score":0.42436478,"about_ca_system_score_codex":0.000021988668,"about_ca_system_score_gemma":0.000007266952,"threshold_uncertainty_score":0.15360993},"labels":[],"label_agreement":null},{"id":"W2400470952","doi":"10.1007/978-1-4939-0888-2_33","title":"Affinity Purification of Protein Complexes from Drosophila Embryos in Cell Cycle Studies","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Cancer Research UK","keywords":"Mitosis; Biology; Cell biology; Drosophila melanogaster; Proteomics; Cell cycle; RNA interference; Model organism; Embryo; Cell division; Imaginal disc; Cell; Genetics; Gene; RNA","score_opus":0.035613192216312164,"score_gpt":0.3630592324329071,"score_spread":0.32744604021659496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400470952","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8666874,0.0025781605,0.12914616,0.00010906664,0.00008427338,0.00040798297,0.000024960387,0.00000946126,0.00095251144],"genre_scores_gemma":[0.65895224,0.00007247209,0.34058544,0.000118504235,0.00004653089,0.00010777643,0.00007729013,0.00001607146,0.000023669623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676317,0.001985073,0.0004422932,0.00048436993,0.00006300707,0.00026210258],"domain_scores_gemma":[0.9991178,0.000108947126,0.00018185239,0.00048137395,0.000069773596,0.000040259256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013891316,0.00018872206,0.00039400722,0.00011563004,0.000026983103,0.000005265661,0.0002906105,0.00027799077,0.0000114528975],"category_scores_gemma":[0.0007887345,0.00018403957,0.000085089996,0.00016790285,0.00021205822,0.0000024212434,0.00018320442,0.0001684102,0.0000036448544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005862679,0.00010613572,0.0021498576,0.000040498846,0.000020863972,0.0000016346618,0.000108004875,0.000058412534,0.99118406,0.0016475378,0.000004759912,0.004619618],"study_design_scores_gemma":[0.00064257847,0.00026954393,0.0016327528,0.000027017517,0.0000071137106,9.308757e-7,0.00007368525,0.00013234574,0.9668068,0.029082319,0.0011404733,0.00018439829],"about_ca_topic_score_codex":0.000111680216,"about_ca_topic_score_gemma":0.000056668592,"teacher_disagreement_score":0.21143928,"about_ca_system_score_codex":0.00001618608,"about_ca_system_score_gemma":0.0000350716,"threshold_uncertainty_score":0.7504916},"labels":[],"label_agreement":null},{"id":"W2400483255","doi":"10.1007/978-1-4939-1652-8_9","title":"Conversion of BAC Clones into Binary BAC (BIBAC) Vectors and Their Delivery into Basidiomycete Fungal Cells Using Agrobacterium tumefaciens","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Recombineering; Biology; Agrobacterium; Transformation (genetics); Genome; Agrobacterium tumefaciens; genomic DNA; Genetics; Bacterial artificial chromosome; DNA; Gene","score_opus":0.013211788174502704,"score_gpt":0.29947516266043256,"score_spread":0.28626337448592987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400483255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8147761,0.0023465198,0.18233205,0.000046056713,0.00031443735,0.00013263745,0.000011271653,0.0000073296064,0.00003355912],"genre_scores_gemma":[0.7775745,0.00036009503,0.22155806,0.00016750401,0.00010518761,0.0000065845406,0.00016804317,0.000021408294,0.000038628805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978563,0.0010466609,0.0003097712,0.0004847494,0.000048470753,0.00025403182],"domain_scores_gemma":[0.99934185,0.000057587044,0.00013852098,0.00030353415,0.000083109226,0.00007538148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006979701,0.00024183543,0.0003515592,0.00013388928,0.00007763825,0.000010511363,0.00018085193,0.00039996844,0.0000070334527],"category_scores_gemma":[0.000105036015,0.00019454828,0.0000974854,0.00014715779,0.00025461233,0.0000067546375,0.00021683592,0.00012438442,0.0000012253695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006842541,0.00002897396,0.0020472605,0.00006069822,0.00004384739,0.000005156379,0.0002081132,0.00012507738,0.9941394,0.000051355808,0.000033709857,0.003188013],"study_design_scores_gemma":[0.0003869514,0.0003706785,0.00036424273,0.000022157667,0.000023752189,0.00003666723,0.00008319161,0.0010978645,0.98880404,0.00013207998,0.008445649,0.00023271127],"about_ca_topic_score_codex":0.00035100564,"about_ca_topic_score_gemma":0.00006835166,"teacher_disagreement_score":0.039226003,"about_ca_system_score_codex":0.000021917662,"about_ca_system_score_gemma":0.000057542125,"threshold_uncertainty_score":0.79334486},"labels":[],"label_agreement":null},{"id":"W2400571451","doi":"10.1007/978-1-4939-3566-6_3","title":"Assessment of Inflammasome Activation by Cytokine and Danger Signal Detection","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds de Recherche en Santé Respiratoire; Agence Nationale de la Recherche; Health Research Foundation","keywords":"Inflammasome; Pyroptosis; Caspase 1; Immunoassay; Cytokine; Secretion; Chemistry; Antibody; Blot; Extracellular; Biology; Cell biology; Biochemistry; Immunology; Receptor","score_opus":0.00775339671307942,"score_gpt":0.33609348258755545,"score_spread":0.32834008587447605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400571451","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4524226,0.00020997033,0.54685557,0.000067459245,0.00003624185,0.00009631889,0.000005242321,0.000003575267,0.0003030301],"genre_scores_gemma":[0.9242771,0.0003028284,0.07513186,0.00010403676,0.000025177545,0.00004221396,0.00003962094,0.000017092289,0.00006003956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871427,0.0004832475,0.00026251143,0.0002986471,0.000048624683,0.00019271737],"domain_scores_gemma":[0.999543,0.00004796247,0.000117271244,0.0002127112,0.000052938416,0.000026097003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058903015,0.00013295136,0.00018236734,0.0000960981,0.000023346132,0.0000037146106,0.0000979089,0.00022400884,0.000017768882],"category_scores_gemma":[0.0001534685,0.00010283962,0.000052063377,0.00009688317,0.00013907118,0.0000072130574,0.000092628565,0.000072293224,4.4005296e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037707385,0.000023545974,0.004462828,0.000007707615,0.000032016265,4.5406347e-7,0.000007999608,0.0000033964382,0.9044471,0.00031892816,0.00000647239,0.09065187],"study_design_scores_gemma":[0.0007554296,0.00036005766,0.0049332064,0.00001176094,0.000007741551,0.00000303363,0.000016196436,0.000029441664,0.98547,0.00057859253,0.007696243,0.0001382924],"about_ca_topic_score_codex":0.000015739834,"about_ca_topic_score_gemma":0.0000053486847,"teacher_disagreement_score":0.47185457,"about_ca_system_score_codex":0.000017261826,"about_ca_system_score_gemma":0.00002895146,"threshold_uncertainty_score":0.4193678},"labels":[],"label_agreement":null},{"id":"W2400616920","doi":"10.1007/978-1-4939-2013-6_23","title":"A Quantitative and High-Throughput Assay of Human Papillomavirus DNA Replication","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"DNA replication; Biology; Eukaryotic DNA replication; Control of chromosome duplication; Plasmid; Molecular biology; DNA; Replication factor C; Viral replication; Genetics; Virus","score_opus":0.07589709009636468,"score_gpt":0.5197834487039785,"score_spread":0.44388635860761383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400616920","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17803325,0.0007712428,0.81286955,0.0006516562,0.0000379087,0.00026484387,0.0000034219427,0.000014638996,0.0073535154],"genre_scores_gemma":[0.4802348,0.00006482926,0.51918036,0.00037546645,0.000023600602,0.000034989054,0.0000210086,0.000011869189,0.000053043892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979366,0.0012397968,0.00024347975,0.00033728595,0.000076864875,0.00016593937],"domain_scores_gemma":[0.9989964,0.00038249104,0.00006231454,0.000402454,0.00010024744,0.000056123885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002417202,0.000081556966,0.00034767317,0.0001225263,0.00002312218,0.0000029592384,0.00007376195,0.00012737908,0.0001282703],"category_scores_gemma":[0.0016232431,0.00006760831,0.00004120178,0.0001904061,0.00023926432,0.0000106072775,0.00007735182,0.00017318808,0.0000020869627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096622935,0.000039197283,0.0033906822,0.00005285919,0.00002001241,0.0000025279787,0.0000706112,3.638861e-7,0.7768532,0.08624193,0.000008200704,0.13322377],"study_design_scores_gemma":[0.0018821806,0.0023231346,0.09907336,0.000022818258,0.000041847183,0.000010024363,0.00005430376,0.00053937855,0.7858407,0.10735526,0.0027158593,0.00014114389],"about_ca_topic_score_codex":0.00031812926,"about_ca_topic_score_gemma":0.000026979566,"teacher_disagreement_score":0.30220157,"about_ca_system_score_codex":0.00002796676,"about_ca_system_score_gemma":0.000023586459,"threshold_uncertainty_score":0.27569866},"labels":[],"label_agreement":null},{"id":"W2400758210","doi":"10.1007/978-1-4939-1568-2","title":"Mast Cells","year":2014,"lang":"en","type":"editorial","venue":"Methods in molecular biology","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mast (botany); Mast cell; Medicine; Immunology","score_opus":0.008274326875897494,"score_gpt":0.3739633951871159,"score_spread":0.3656890683112184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400758210","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008486825,0.002159815,0.67999333,0.000043471,0.315632,0.00025466437,0.00016556396,0.000017868015,0.0016484325],"genre_scores_gemma":[0.00003079591,0.0007064684,0.6240535,0.00030342178,0.3701592,0.0002625704,0.0023672439,0.0001166444,0.0020001838],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99635035,0.0013460239,0.000531411,0.0010598941,0.00014407643,0.00056825276],"domain_scores_gemma":[0.9981124,0.00021527024,0.00024366443,0.0011972545,0.0001175353,0.000113912196],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013922949,0.0004694911,0.00065772195,0.00019082663,0.000048704773,0.00002282994,0.00084179465,0.0020015787,0.000027218497],"category_scores_gemma":[0.0011804805,0.00046647587,0.00024408937,0.00020199268,0.00022466968,0.0000010524869,0.00044000882,0.0006615258,0.00004123281],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014845831,0.0000360324,0.0000071076547,0.000021765347,0.000035422705,0.0000027779106,0.0000037319633,0.000008725594,0.6998075,0.00035098204,0.29280668,0.0069044223],"study_design_scores_gemma":[0.000325254,0.00008945092,0.0000025907952,0.000009472645,0.000031668413,0.0000014666394,0.0000023943549,0.000010753779,0.29711655,0.001306033,0.7007651,0.0003392754],"about_ca_topic_score_codex":0.000049178518,"about_ca_topic_score_gemma":0.000021863629,"teacher_disagreement_score":0.40795842,"about_ca_system_score_codex":0.000021580441,"about_ca_system_score_gemma":0.00019353889,"threshold_uncertainty_score":0.9997787},"labels":[],"label_agreement":null},{"id":"W2400861197","doi":"10.1007/978-1-60327-389-3_13","title":"Derivation, Culture, and In vivo Developmental Capacity of Embryonic Cell Lines from Rat Blastocysts","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Saint Hyacinthe; Université de Montréal","funders":"","keywords":"Embryonic stem cell; In vivo; Cell biology; Biology; Germline; Cell culture; Gene targeting; Gene; Computational biology; Genetics","score_opus":0.019885500997901043,"score_gpt":0.33861166439616636,"score_spread":0.3187261633982653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400861197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88611865,0.0014720123,0.11155691,0.00006783153,0.00005934644,0.0002270706,0.000014886468,0.0000046955256,0.0004786222],"genre_scores_gemma":[0.5254169,0.00029468077,0.4738351,0.0002020621,0.000025294245,0.000016411757,0.000057325862,0.000011899413,0.00014030603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980618,0.00073245936,0.0003455913,0.00047718658,0.00008102141,0.00030193623],"domain_scores_gemma":[0.99951774,0.00004463435,0.00009217479,0.00022312018,0.00006313248,0.000059227554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005934897,0.00018397521,0.00029251433,0.00014401304,0.000023591127,0.0000076065517,0.00022755252,0.0003198355,0.0000125987735],"category_scores_gemma":[0.00027556904,0.00017474571,0.00005110525,0.00021618452,0.0001440986,0.0000037043972,0.00014360172,0.00016885762,0.0000010907032],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008009072,0.00007638689,0.007145994,0.000013927295,0.000012709364,0.000008009068,0.00007057867,0.000036327954,0.99078095,0.000045519337,0.000040026924,0.0016894671],"study_design_scores_gemma":[0.0007854962,0.00019636932,0.004193551,0.000016198395,0.000004487244,0.000008718039,0.00004080854,0.000090653826,0.9908328,0.0013754568,0.0022786367,0.00017681366],"about_ca_topic_score_codex":0.00006640339,"about_ca_topic_score_gemma":0.00008524398,"teacher_disagreement_score":0.3622782,"about_ca_system_score_codex":0.000031340624,"about_ca_system_score_gemma":0.00007364122,"threshold_uncertainty_score":0.71259236},"labels":[],"label_agreement":null},{"id":"W2400936226","doi":"10.1007/978-1-62703-128-8_18","title":"Studying Leukocyte Recruitment Under Flow Conditions","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity; University of Calgary","funders":"","keywords":"Adhesive; Adhesion; In vitro; Shear stress; Monolayer; Immunology; Cell adhesion; Cell adhesion molecule; Cell biology; Chemistry; Biophysics; Materials science; Biology; Nanotechnology; Composite material; Biochemistry","score_opus":0.21027405881706623,"score_gpt":0.5280247569295052,"score_spread":0.317750698112439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400936226","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08569133,0.0021156091,0.9056761,0.0012836019,0.00030932648,0.0010669981,0.000004014704,0.00005173337,0.0038012366],"genre_scores_gemma":[0.061442785,0.00009960438,0.93497646,0.0025146548,0.00008743357,0.00032297033,0.00006482067,0.000040164996,0.0004510785],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967745,0.001750323,0.00033211967,0.00033381442,0.00016312448,0.00064610614],"domain_scores_gemma":[0.99883527,0.000342986,0.000051018433,0.00047437206,0.00006563468,0.00023069711],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001997454,0.00017483592,0.0003792016,0.00034439526,0.000059308957,0.000007859007,0.00013646603,0.0002035114,0.000477074],"category_scores_gemma":[0.00057025015,0.00015303443,0.0001235809,0.00039934868,0.0001595591,0.000027653496,0.00019180715,0.0004302547,0.00008471822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048909234,0.0002703807,0.00718392,0.00002190889,0.00007707303,0.00005855773,0.00012549528,0.000049083133,0.9652822,0.0027006562,0.00014169657,0.024040129],"study_design_scores_gemma":[0.0027679966,0.00056993146,0.020674372,0.00006063481,0.00010653161,0.00020812119,0.00043921644,0.0010245484,0.9205463,0.0056477077,0.047564417,0.0003902038],"about_ca_topic_score_codex":0.00002192452,"about_ca_topic_score_gemma":0.0000021755482,"teacher_disagreement_score":0.047422722,"about_ca_system_score_codex":0.00022632441,"about_ca_system_score_gemma":0.000068778114,"threshold_uncertainty_score":0.6240563},"labels":[],"label_agreement":null},{"id":"W2400971726","doi":"10.1007/978-1-4939-2999-3_16","title":"Isolation of Camelid Single-Domain Antibodies Against Native Proteins Using Recombinant Multivalent Peptide Ligands","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Guelph; National Research Council Canada","funders":"","keywords":"Epitope; Peptide; Recombinant DNA; Phage display; Antigen; Panning (audio); Peptide library; Biology; Peptide sequence; Molecular biology; Linear epitope; Single-domain antibody; Fusion protein; Chemistry; Computational biology; Antibody; Biochemistry; Genetics; Gene","score_opus":0.10308392045112993,"score_gpt":0.44844652172182337,"score_spread":0.3453626012706934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2400971726","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7085055,0.00081444834,0.28829435,0.00035845465,0.00015494604,0.00046293167,0.000007992969,0.000012915869,0.0013884677],"genre_scores_gemma":[0.21942906,0.000070352595,0.7800116,0.00012866507,0.000047689515,0.000019251002,0.000034490302,0.0000214676,0.00023741905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976357,0.00094451103,0.00049292017,0.00034866904,0.0002054396,0.00037275502],"domain_scores_gemma":[0.998957,0.00020409259,0.00017093783,0.00023632513,0.0002944468,0.00013723988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017433373,0.00019836723,0.0005768185,0.00034662406,0.00004107414,0.0000059868016,0.00012533502,0.00018403018,0.000009676762],"category_scores_gemma":[0.0011752179,0.0001557678,0.00013237957,0.00034185464,0.0003176799,0.00003281332,0.000162135,0.00030529997,0.0000025892516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000427453,0.0002557372,0.030059911,0.00008607781,0.00007646612,0.00008701627,0.0007851377,0.00004897558,0.96180785,0.0007075406,0.000011102281,0.005646733],"study_design_scores_gemma":[0.0017735183,0.0012706374,0.0029670573,0.00026953363,0.000027432052,0.00005950286,0.0005978713,0.004687101,0.9808001,0.0060814423,0.0012418627,0.00022397476],"about_ca_topic_score_codex":0.00031099687,"about_ca_topic_score_gemma":0.000017170425,"teacher_disagreement_score":0.49171725,"about_ca_system_score_codex":0.00015163135,"about_ca_system_score_gemma":0.00017525697,"threshold_uncertainty_score":0.63520265},"labels":[],"label_agreement":null},{"id":"W2401007103","doi":"10.1007/978-1-4939-1568-2_9","title":"The Parasympathetic Nervous System as a Regulator of Mast Cell Function","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Nicotinic Acetylcholine Receptors Study","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; McMaster University","funders":"","keywords":"Mast cell; Cholinergic; Neuroscience; Nervous system; Biology; Immune system; Parasympathetic nervous system; Inflammation; Central nervous system; Enteric nervous system; Peripheral nervous system; Autonomic nervous system; Immunology; Endocrinology","score_opus":0.017081713513566004,"score_gpt":0.3919586656504449,"score_spread":0.3748769521368789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401007103","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007015471,0.7971674,0.19982828,0.000008700578,0.0007944434,0.00089648744,0.000013732496,0.00001781788,0.0012029522],"genre_scores_gemma":[0.00018739529,0.94746166,0.05079674,0.000045483277,0.00027853326,0.00038243167,0.00016974074,0.00014434694,0.00053364626],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99121827,0.0057767043,0.0013274192,0.0009533723,0.00014565878,0.0005785954],"domain_scores_gemma":[0.9969201,0.0003186021,0.0009959871,0.0015572676,0.00011205605,0.000095955205],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0032142543,0.0006258684,0.0018519835,0.00015778595,0.00009343657,0.000017626358,0.0009239396,0.0011749973,0.000006948741],"category_scores_gemma":[0.00056397414,0.00043208455,0.00083616405,0.00034905446,0.00031388388,0.0000011336767,0.0005015963,0.0004960511,0.000029240447],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004998872,0.00009387354,0.000015663289,0.0038109436,0.0003166791,0.0000021421242,0.000012979262,0.000009863633,0.028231828,0.002139018,0.00012980572,0.9651872],"study_design_scores_gemma":[0.00035857546,0.00066576985,8.6779517e-7,0.0007494859,0.00044764482,0.0000803444,0.000044205073,0.000016243139,0.011511857,0.00014852632,0.9855483,0.00042816348],"about_ca_topic_score_codex":0.000026388063,"about_ca_topic_score_gemma":0.000006828329,"teacher_disagreement_score":0.9854185,"about_ca_system_score_codex":0.00007912232,"about_ca_system_score_gemma":0.0002923577,"threshold_uncertainty_score":0.9998131},"labels":[],"label_agreement":null},{"id":"W2401043745","doi":"10.1007/978-1-62703-667-2_15","title":"RNA Conformational Changes Analyzed by Comparative Gel Electrophoresis","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Folding (DSP implementation); Electrophoresis; RNA; Gel electrophoresis; Function (biology); Riboswitch; Dihedral angle; Chemistry; Molecule; Biology; Chromatography; Biochemistry; Genetics; Gene; Non-coding RNA; Hydrogen bond; Engineering","score_opus":0.02030908957424343,"score_gpt":0.35304905771439105,"score_spread":0.3327399681401476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401043745","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1900177,0.0025401553,0.80384827,0.0004258853,0.00009414046,0.00048991,0.000022605605,0.00001545173,0.0025459041],"genre_scores_gemma":[0.34420133,0.00031209883,0.6528147,0.0014523235,0.00007580721,0.00045576663,0.00028014038,0.000028364255,0.00037946907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780905,0.0010224846,0.00028848636,0.00040219413,0.00008220049,0.00039558197],"domain_scores_gemma":[0.99935186,0.000066329136,0.00012897253,0.0002756382,0.000095443225,0.000081774866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061829056,0.00022692501,0.0003297905,0.00011475411,0.000055444005,0.000024464362,0.00030204933,0.00030535972,0.00028569836],"category_scores_gemma":[0.00015990871,0.00020451569,0.0000913192,0.00016325898,0.000121279285,0.000004217427,0.0001027888,0.00012562422,0.00003473224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003450282,0.000030904906,0.00008638988,0.000005061565,0.000066847155,0.0000013229112,0.00003438228,0.00000657592,0.9896835,0.0009857033,0.0009374494,0.0081273625],"study_design_scores_gemma":[0.0003533417,0.0002814007,0.00014023768,0.0000047107537,0.000010309413,0.000009447943,0.00005352036,0.00015668338,0.9843388,0.003959529,0.010446157,0.0002458287],"about_ca_topic_score_codex":0.00009617296,"about_ca_topic_score_gemma":0.000012055848,"teacher_disagreement_score":0.15418363,"about_ca_system_score_codex":0.000020019601,"about_ca_system_score_gemma":0.000035136625,"threshold_uncertainty_score":0.8339908},"labels":[],"label_agreement":null},{"id":"W2401099396","doi":"10.1007/978-1-61779-139-0_9","title":"Ratiometric Analysis of Subcellular Recruitment of Fc Receptors During Phagocytosis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Sunnybrook Hospital; University of Toronto","funders":"","keywords":"Phagocytosis; Receptor; Cell biology; Context (archaeology); Subcellular localization; Cell surface receptor; Biology; Signal transduction; Actin cytoskeleton; Immune system; Cytoskeleton; Cell; Chemistry; Biochemistry; Immunology; Cytoplasm","score_opus":0.16821682327996273,"score_gpt":0.47464474854168004,"score_spread":0.3064279252617173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401099396","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9010537,0.0018884972,0.094884284,0.000050939263,0.00008181242,0.0003385643,0.000013173123,0.0000075846365,0.0016814134],"genre_scores_gemma":[0.4300322,0.00044885481,0.56901634,0.00004190354,0.000012818538,0.000042906886,0.000049971757,0.000013156479,0.00034183808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786425,0.00085962756,0.00056077,0.00028893142,0.00016270862,0.0002637186],"domain_scores_gemma":[0.99909705,0.00020489309,0.00016216349,0.00032961377,0.00012359119,0.00008270066],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012517017,0.00013334803,0.0007656327,0.0021713497,0.000017729097,0.0000011244256,0.00016175103,0.00014626734,0.0006093924],"category_scores_gemma":[0.00042123528,0.000107327985,0.00038678662,0.0033485773,0.0002016962,0.000012253884,0.0001092853,0.0001666936,0.0000031355519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044505997,0.00020902952,0.17326878,0.00009134965,0.0013090965,0.00002730823,0.00027125177,0.0000065377844,0.81140476,0.0010571446,0.0000017129739,0.011907948],"study_design_scores_gemma":[0.00047847806,0.00057185884,0.060621977,0.000019234958,0.00049780717,0.0000043588993,0.00005389848,0.00018477962,0.93678194,0.00030578102,0.00038932954,0.00009053138],"about_ca_topic_score_codex":0.0003927533,"about_ca_topic_score_gemma":0.00000934235,"teacher_disagreement_score":0.47413206,"about_ca_system_score_codex":0.00004243126,"about_ca_system_score_gemma":0.000042745087,"threshold_uncertainty_score":0.66724193},"labels":[],"label_agreement":null},{"id":"W2401261467","doi":"10.1007/978-1-60761-198-1_33","title":"Computational Modeling of Signaling Networks for Eukaryotic Chemosensing","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"National Institutes of Health","keywords":"Cell signaling; Computational model; Eukaryotic cell; Computer science; Signal transduction; Computational biology; Intracellular; GTPase; Extracellular; Cell biology; Biology; Artificial intelligence; Cell; Biochemistry","score_opus":0.02593872584596166,"score_gpt":0.33386611252785536,"score_spread":0.3079273866818937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401261467","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09884877,0.0035453993,0.89660496,0.00015683571,0.000399467,0.00023920371,0.0000038013748,0.000032451517,0.0001691165],"genre_scores_gemma":[0.5597273,0.000012093765,0.43985668,0.00026789596,0.000014429568,0.0000057686543,0.00008012705,0.000010155685,0.000025514692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977946,0.0008136049,0.00055420666,0.00037349324,0.0000154839,0.0004485633],"domain_scores_gemma":[0.9989933,0.00052669254,0.00015443203,0.00020634745,0.00010548216,0.000013783664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009969369,0.00019511922,0.0005191427,0.00019382541,0.00007904566,0.000004204925,0.00021093599,0.00048065238,0.000025673271],"category_scores_gemma":[0.0002182156,0.0001889605,0.00015651097,0.00018924155,0.00017968586,0.000020466927,0.000052941803,0.00031412338,0.0000036478752],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010923502,0.00007774741,0.00009939443,0.000007784571,0.0000639958,0.000002947673,0.00006316918,0.1322387,0.8444346,0.004708965,0.0000075312446,0.018185932],"study_design_scores_gemma":[0.0017637193,0.00043205844,0.000032087828,0.000037010494,0.000047934718,0.00005562237,0.00006263192,0.19643709,0.7456555,0.055026796,0.0001857446,0.000263823],"about_ca_topic_score_codex":0.00001880955,"about_ca_topic_score_gemma":0.0000010475161,"teacher_disagreement_score":0.46087858,"about_ca_system_score_codex":0.000027820153,"about_ca_system_score_gemma":0.00004391671,"threshold_uncertainty_score":0.7705586},"labels":[],"label_agreement":null},{"id":"W2401279933","doi":"10.1007/978-1-59745-559-6_22","title":"Poxvirus Tropism for Primary Human Leukocytes and Hematopoietic Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Center for Research Resources; National Institute of Allergy and Infectious Diseases","keywords":"Tropism; Haematopoiesis; Virology; Primary cell; Primary (astronomy); Biology; Cell biology; Cell culture; Virus; Stem cell; Genetics","score_opus":0.0225180239649467,"score_gpt":0.38359233958174405,"score_spread":0.36107431561679737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401279933","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25939238,0.02174395,0.7133069,0.00080362486,0.00044337963,0.0010810335,0.00004964689,0.0001070237,0.0030720688],"genre_scores_gemma":[0.20768718,0.00048080352,0.7857212,0.004081781,0.00006793054,0.00017939993,0.00021920622,0.00005322257,0.0015092961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975319,0.001059733,0.0003188473,0.00044900386,0.000019601717,0.0006209415],"domain_scores_gemma":[0.99919456,0.00036131588,0.00006941554,0.000296692,0.00003510303,0.000042915835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009129842,0.00020586187,0.00046057755,0.0002146066,0.00012171593,0.000012393053,0.0002608875,0.00041127572,0.0000596127],"category_scores_gemma":[0.0001988474,0.00018101656,0.00010634868,0.00011548374,0.00032568557,0.000027034746,0.00009570237,0.00033161187,0.00002143521],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009338802,0.000063868414,0.00015081256,0.000018653225,0.000036570575,0.000011656513,0.00007132551,6.321099e-7,0.9241256,0.010510301,0.00015326584,0.0647639],"study_design_scores_gemma":[0.0015619743,0.00065434404,0.0013057928,0.000013030485,0.000016984915,0.000044089353,0.00002805059,0.0000029463545,0.93262833,0.04242002,0.02111413,0.00021032564],"about_ca_topic_score_codex":0.00004999706,"about_ca_topic_score_gemma":0.00000798691,"teacher_disagreement_score":0.07241428,"about_ca_system_score_codex":0.000041806146,"about_ca_system_score_gemma":0.000044724675,"threshold_uncertainty_score":0.7381641},"labels":[],"label_agreement":null},{"id":"W2401286955","doi":"10.1007/978-1-60761-588-0_11","title":"siRNA Specific Delivery System for Targeting Dendritic Cells","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Gene silencing; In vivo; Dendritic cell; Cell biology; CD40; In vitro; Immune system; Small interfering RNA; Chemistry; Biology; Transfection; Immunology; Cell culture; Cytotoxic T cell; Biochemistry; Gene","score_opus":0.01651548274885336,"score_gpt":0.333847895504648,"score_spread":0.31733241275579466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401286955","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40921596,0.0009836103,0.5874866,0.000031653457,0.0015242959,0.00027038896,0.000021828128,0.000017766266,0.00044783918],"genre_scores_gemma":[0.35617614,0.000095302574,0.6428179,0.00022349288,0.00031770862,0.000102140075,0.000106780244,0.000038755683,0.00012174925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979804,0.000411563,0.0004151224,0.0006442665,0.000055786913,0.0004928562],"domain_scores_gemma":[0.9990947,0.00009869288,0.000106647545,0.00047873647,0.00013682677,0.000084356674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010913078,0.0002430282,0.00030507473,0.00012719825,0.00007037281,0.000024851837,0.0004198926,0.0004559936,0.000020800893],"category_scores_gemma":[0.00020312106,0.00024057474,0.0002009895,0.00011322922,0.00013138457,0.000003328663,0.00015474058,0.00026226407,0.000015018821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006597025,0.00003150832,0.0003200444,0.000033747165,0.00003233464,0.00001310198,0.000017050306,0.000031698837,0.99016947,0.0010578204,0.00038329253,0.00784399],"study_design_scores_gemma":[0.00045663398,0.00024153077,0.000036520192,0.000014117142,0.000013312703,0.000024288625,0.00010839111,0.0002017056,0.9605618,0.00045351678,0.037610844,0.00027732056],"about_ca_topic_score_codex":0.00001949283,"about_ca_topic_score_gemma":0.000019990799,"teacher_disagreement_score":0.05533127,"about_ca_system_score_codex":0.000019164032,"about_ca_system_score_gemma":0.000054811655,"threshold_uncertainty_score":0.9810353},"labels":[],"label_agreement":null},{"id":"W2401302125","doi":"10.1007/978-1-60761-999-4_10","title":"Isolation and Culture of Human Multipotent Stromal Cells from the Pancreas","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mesenchymal stem cell; Multipotent Stem Cell; Stromal cell; Pancreas; Cell biology; Biology; Bone marrow; Stem cell transplantation for articular cartilage repair; Immunology; Stem cell; Pathology; Cellular differentiation; Adult stem cell; Cancer research; Medicine; Progenitor cell; Endocrinology","score_opus":0.040097069582819486,"score_gpt":0.3602840701472108,"score_spread":0.3201870005643913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401302125","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77410644,0.0007968193,0.22303545,0.000046275676,0.00007884407,0.00017331261,0.0000063727207,0.000010118948,0.0017463844],"genre_scores_gemma":[0.4129589,0.00002155123,0.5866316,0.0002865008,0.00002221054,0.0000093349545,0.000016477885,0.000005316957,0.00004813027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904317,0.00048817127,0.00017724597,0.00015561981,0.000035022593,0.0001007744],"domain_scores_gemma":[0.9995619,0.00012652494,0.0000645033,0.00018330477,0.00002964939,0.00003411775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036689942,0.00007846221,0.00022278218,0.000034393302,0.000020665912,0.0000016351713,0.00004587183,0.000117089825,0.00008504903],"category_scores_gemma":[0.0002196831,0.000048369096,0.00004344231,0.0000649829,0.00011563147,0.00000822592,0.000031895168,0.00010978334,0.0000013483653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046659377,0.00003721475,0.058783356,0.000005944679,0.000037406928,0.0000028201614,0.00067658426,2.7828898e-7,0.93645763,0.0005635167,0.000019417888,0.0033691854],"study_design_scores_gemma":[0.0010366505,0.0004052275,0.09960885,0.000028067738,0.00009170091,0.0000038830913,0.0002876542,0.00023899588,0.89134765,0.0065423264,0.00034105984,0.000067948844],"about_ca_topic_score_codex":0.00040686326,"about_ca_topic_score_gemma":0.0000045001507,"teacher_disagreement_score":0.3635961,"about_ca_system_score_codex":0.000008035896,"about_ca_system_score_gemma":0.0000095941305,"threshold_uncertainty_score":0.19724345},"labels":[],"label_agreement":null},{"id":"W2401348667","doi":"10.1007/978-1-61779-504-6_14","title":"Radioactive Labeling of Mitochondrial Translation Products in Cultured Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"","keywords":"Mitochondrion; Translation (biology); Mitochondrial DNA; Protein biosynthesis; Biology; Mitochondrial matrix; Mitochondrial disease; Mitochondrial ribosome; Biochemistry; Nuclear gene; Molecular biology; Cell biology; Gene; Enzyme; Messenger RNA; Cytosol; RNA; Ribosome","score_opus":0.04419980522840924,"score_gpt":0.34427030085830806,"score_spread":0.30007049562989885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401348667","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01622006,0.00096072885,0.97939926,0.000040714294,0.0011715491,0.0004520781,0.000011038678,0.00000885493,0.0017357104],"genre_scores_gemma":[0.001299987,0.00009053893,0.9981903,0.0001134309,0.00011169367,0.000043422933,0.000061471284,0.000019732479,0.000069421236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974512,0.0012802788,0.00043422767,0.00051717967,0.00005031924,0.00026682866],"domain_scores_gemma":[0.99937916,0.00003615084,0.00013344135,0.00033263426,0.000080090984,0.0000385494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005871816,0.00017785681,0.00031895313,0.000183809,0.000016554352,0.000002448229,0.00018416521,0.000421219,0.000037828533],"category_scores_gemma":[0.00034869747,0.00017152415,0.00008728394,0.00029472157,0.00013434577,0.0000035467647,0.00004575475,0.00018763203,0.0000026064042],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004160235,0.00010221103,0.00062533346,0.000015032294,0.00002401316,0.000008304205,0.0004988068,0.000041868338,0.9938884,0.00048052895,0.000021108412,0.0038784111],"study_design_scores_gemma":[0.0011060592,0.0003419121,0.000029150424,0.000009463071,0.000013279606,0.0000101244705,0.000070250935,0.000029688423,0.9947481,0.001140379,0.002328999,0.00017258193],"about_ca_topic_score_codex":0.000075981705,"about_ca_topic_score_gemma":0.000060289603,"teacher_disagreement_score":0.018791035,"about_ca_system_score_codex":0.00001383607,"about_ca_system_score_gemma":0.00006106684,"threshold_uncertainty_score":0.6994552},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2401447792","doi":"10.1007/978-1-62703-161-5_17","title":"Electron Microscopy of Legionella and Legionella-Infected Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Legionella; Context (archaeology); Transmission electron microscopy; Ultrastructure; Electron microscope; Microbiology; Microscopy; Biology; Nanotechnology; Physics; Materials science; Bacteria; Optics; Botany; Genetics","score_opus":0.016663739933172973,"score_gpt":0.39582491772720224,"score_spread":0.37916117779402925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401447792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80239123,0.005267693,0.19098891,0.00008944335,0.00020741721,0.00024159503,0.0000053649005,0.000009263238,0.00079909916],"genre_scores_gemma":[0.815648,0.00086891215,0.18287267,0.00021182274,0.00012083001,0.000023424736,0.000043753796,0.00003409694,0.00017644626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978446,0.0007035886,0.00032887835,0.00040930943,0.00007698,0.0006366706],"domain_scores_gemma":[0.99923426,0.000060216815,0.00010591729,0.0003959479,0.00007163926,0.00013202545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010819618,0.00021766128,0.00032679908,0.00016809511,0.00004258962,0.000008667831,0.00021768962,0.00036787256,0.0000074005366],"category_scores_gemma":[0.00013262918,0.00020261317,0.00009775871,0.0002419337,0.00032834205,0.0000045496263,0.00022919619,0.00021650398,0.0000040684886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008242038,0.00010792249,0.020032516,0.000026546139,0.00004049704,0.0000025987401,0.00005364736,0.0000054621255,0.9772254,0.0009087608,0.00012508004,0.0013891112],"study_design_scores_gemma":[0.00062581955,0.0002953922,0.001149338,0.000008909701,0.0000138890255,0.000028252927,0.000027723903,0.000019118403,0.98534656,0.00046485948,0.011807522,0.00021261645],"about_ca_topic_score_codex":0.000079353646,"about_ca_topic_score_gemma":0.0000068931586,"teacher_disagreement_score":0.018883178,"about_ca_system_score_codex":0.000017752156,"about_ca_system_score_gemma":0.00006136286,"threshold_uncertainty_score":0.82623255},"labels":[],"label_agreement":null},{"id":"W2401465596","doi":"10.1007/978-1-4939-1680-1_3","title":"Isolation of Nuclei in Media Containing an Inert Polymer to Mimic the Crowded Cytoplasm","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Cytoplasm; Macromolecule; Nucleolus; Nucleus; Cajal body; Cytoskeleton; Cell biology; Biophysics; Chemistry; RNA splicing; Biology; Cell; RNA; Biochemistry; Gene","score_opus":0.011873560883247265,"score_gpt":0.3292057712620464,"score_spread":0.31733221037879916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401465596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63216597,0.00013603193,0.3671382,0.00012742102,0.0000983543,0.00010671906,0.0000038635458,0.0000029901491,0.00022044875],"genre_scores_gemma":[0.73919153,0.000012717746,0.26009282,0.00057198113,0.000037000333,0.000018582537,0.0000479962,0.000018278977,0.000009068063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980697,0.0009326301,0.00036499737,0.0003347586,0.000046599416,0.00025128314],"domain_scores_gemma":[0.99926764,0.00009328455,0.000105999374,0.00044244903,0.000040271832,0.0000503615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012841973,0.0001466482,0.00024545143,0.00011775039,0.000024779056,0.0000080509635,0.0003234236,0.00023146014,0.000007086115],"category_scores_gemma":[0.0004663486,0.00012287362,0.000057522768,0.0001678943,0.00009000587,0.0000019901659,0.00015004925,0.00012494832,0.0000012539073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005997104,0.000030581687,0.006338184,0.0000045149563,0.00001160708,8.837079e-7,0.00024648834,0.000524379,0.98329526,0.0026893748,0.0000032089004,0.0067955484],"study_design_scores_gemma":[0.0008939233,0.00069472095,0.010254192,0.000015726493,0.000012659233,0.000010594633,0.0002488626,0.010705105,0.9725459,0.0032468194,0.0010845365,0.00028691997],"about_ca_topic_score_codex":0.000103297374,"about_ca_topic_score_gemma":0.00036950753,"teacher_disagreement_score":0.107045375,"about_ca_system_score_codex":0.000016928165,"about_ca_system_score_gemma":0.000035899906,"threshold_uncertainty_score":0.5010641},"labels":[],"label_agreement":null},{"id":"W2401525265","doi":"10.1007/978-1-4939-2760-9_5","title":"Glyco-engineering O-Antigen-Based Vaccines and Diagnostics in E. coli","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Glycosylation; Glycan; Escherichia coli; Western blot; Plasmid; Computational biology; Antigen; Protein expression; Biology; Chemistry; Molecular biology; Biochemistry; Glycoprotein; Immunology; Gene","score_opus":0.029842496044488378,"score_gpt":0.39333694485311327,"score_spread":0.3634944488086249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401525265","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5359331,0.0027260387,0.46045122,0.00025168565,0.00011977647,0.0002790168,0.000005144627,0.000010893319,0.00022314698],"genre_scores_gemma":[0.46547914,0.00031670104,0.53340507,0.00045264137,0.00006439024,0.000109519184,0.000076152406,0.00003699777,0.00005938358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984107,0.0005201455,0.0002594819,0.00038682544,0.000076765355,0.00034609914],"domain_scores_gemma":[0.9993744,0.00009616651,0.000040087445,0.00028553818,0.00007850633,0.00012534093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011543919,0.00016513206,0.00022351493,0.00024051999,0.000016681515,0.000015790347,0.00017087685,0.00026426985,0.000008869767],"category_scores_gemma":[0.0024723692,0.00016438453,0.000038880764,0.00027732374,0.000063375875,0.0000023744153,0.00014167845,0.00018303392,0.0000030421463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010018941,0.00005970954,0.05218166,0.000018868934,0.00001315217,0.000046905207,0.000026087286,0.0018610173,0.9397359,0.00059013313,0.000074932985,0.0052914345],"study_design_scores_gemma":[0.003252897,0.00064326415,0.015415087,0.000034465073,0.00000670169,0.000022475831,0.000059510767,0.01287248,0.9163726,0.0012884502,0.049536366,0.0004956822],"about_ca_topic_score_codex":0.00008982304,"about_ca_topic_score_gemma":0.000069856964,"teacher_disagreement_score":0.072953865,"about_ca_system_score_codex":0.00002541165,"about_ca_system_score_gemma":0.0001078895,"threshold_uncertainty_score":0.67034066},"labels":[],"label_agreement":null},{"id":"W2401526570","doi":"10.1007/978-1-4939-0428-0_13","title":"A Precipitation-Based Assay to Analyze Interactions of Viral Particles with Cytosolic Host Factors","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Immunoelectron microscopy; Capsid; Cell biology; Cytosol; Host factor; Intracellular; Biology; Immunoprecipitation; Viral entry; Herpes simplex virus; Viral shedding; Host (biology); Virus; Viral replication; Virology; Chemistry; Gene; Biochemistry; Genetics","score_opus":0.023703389358106123,"score_gpt":0.4092552911154618,"score_spread":0.38555190175735565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401526570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50612146,0.000007847381,0.49321038,0.00012665574,0.000036053134,0.00013002029,0.000003501033,0.000011182353,0.00035291],"genre_scores_gemma":[0.6166007,3.8986866e-7,0.3831628,0.0001571944,0.000007027012,0.000039314444,0.000009177757,0.000008292128,0.000015142218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986064,0.0007583063,0.00021782547,0.00020369778,0.00005108759,0.00016272528],"domain_scores_gemma":[0.9991321,0.0004166728,0.00006592609,0.00023872773,0.00006923913,0.00007734252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004342606,0.00010973215,0.00027726797,0.00025710513,0.000027027274,0.00000405657,0.000043167784,0.000063842046,0.000048603553],"category_scores_gemma":[0.00065500685,0.00007893991,0.000065570464,0.00033535954,0.00006808287,0.000011245225,0.000014533246,0.00010203266,0.0000061238893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014960754,0.00043848006,0.3716844,0.000017710865,0.00018767061,0.0000073443,0.00025341447,0.0005581302,0.586045,0.001268029,0.000004333915,0.03938585],"study_design_scores_gemma":[0.0016481121,0.0016759611,0.11325897,0.00007252665,0.0001682762,0.0000076083447,0.000075669115,0.0029625196,0.875025,0.00076665316,0.0041714367,0.000167296],"about_ca_topic_score_codex":0.0002743122,"about_ca_topic_score_gemma":0.00014381555,"teacher_disagreement_score":0.28897992,"about_ca_system_score_codex":0.000048030386,"about_ca_system_score_gemma":0.000046390694,"threshold_uncertainty_score":0.3219076},"labels":[],"label_agreement":null},{"id":"W2401593194","doi":"10.1007/978-1-62703-755-6_5","title":"Artificial Riboswitch Selection: A FACS-Based Approach","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Riboswitch; Computational biology; Selection (genetic algorithm); Sorting; Computer science; sort; Synthetic biology; Sorting algorithm; Artificial intelligence; Biology; RNA; Information retrieval; Genetics; Non-coding RNA; Algorithm; Gene","score_opus":0.02382600744602811,"score_gpt":0.3522945292516512,"score_spread":0.32846852180562314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401593194","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.033434264,0.00022134607,0.9632764,0.00012648143,0.00018910943,0.0002672159,0.0000031909913,0.00002734408,0.0024546355],"genre_scores_gemma":[0.20114906,0.0000063560838,0.7976682,0.000688073,0.00016788048,0.00014682137,0.000058928836,0.00003423602,0.00008042581],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99653584,0.0019606084,0.00034028824,0.0006626847,0.00008250792,0.00041805216],"domain_scores_gemma":[0.99926096,0.000064686516,0.00009802435,0.0004408483,0.00005678022,0.00007872396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019015605,0.00024214579,0.00030337588,0.00013284839,0.000072835515,0.000019077195,0.00030492927,0.00046489263,0.000040242026],"category_scores_gemma":[0.0005594039,0.000231191,0.00014611054,0.00024374544,0.000103717044,0.000001706648,0.00008298154,0.00016796408,0.000010290109],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007301912,0.000073988194,0.00059139193,0.000011368735,0.000020956273,0.0000011068646,0.000009238708,0.00033750583,0.9409846,0.004768168,0.000016691281,0.053111956],"study_design_scores_gemma":[0.00026006976,0.00037565417,0.0000522062,0.0000049853957,0.0000119309625,0.000011880431,0.000011988442,0.0022839655,0.9686263,0.009116736,0.018963182,0.0002810899],"about_ca_topic_score_codex":0.000021037848,"about_ca_topic_score_gemma":0.000008648152,"teacher_disagreement_score":0.1677148,"about_ca_system_score_codex":0.000017118287,"about_ca_system_score_gemma":0.000063116175,"threshold_uncertainty_score":0.9427696},"labels":[],"label_agreement":null},{"id":"W2401779002","doi":"10.1007/978-1-4939-0354-2_12","title":"High-Throughput Crystallization Screening","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"U.S. Public Health Service","keywords":"Crystallization; Protein crystallization; Crystallography; Structural genomics; Materials science; Chemistry; Protein structure; Biochemistry; Organic chemistry","score_opus":0.018399481712663045,"score_gpt":0.3547028531935422,"score_spread":0.3363033714808792,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401779002","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.035272077,0.0000756486,0.96273345,0.000094907686,0.00064497686,0.00007147263,0.0000014994692,0.000050340044,0.0010556421],"genre_scores_gemma":[0.08491917,0.0000036577233,0.91438824,0.00051825785,0.00009650905,0.000010374345,0.000016716654,0.000011384163,0.000035683453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980652,0.0011638507,0.00020517112,0.00030130026,0.0000536905,0.00021082815],"domain_scores_gemma":[0.99951476,0.00012405653,0.000071399474,0.00023054714,0.00003164894,0.000027611284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001319298,0.0001007423,0.00018024626,0.000084310705,0.000044681037,0.000016359263,0.00013629637,0.00014687494,0.0001967102],"category_scores_gemma":[0.0004526701,0.00008828308,0.00003186838,0.00016387158,0.00007344608,0.00004086637,0.000062910076,0.000091769536,0.000013721449],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000936495,0.000004654648,0.0002538476,0.000004504957,0.0000020544958,0.000001251125,0.000028657963,0.00071565254,0.9436879,0.039738152,0.00001828917,0.015535634],"study_design_scores_gemma":[0.00026859282,0.00009443591,0.0004662189,0.000007095048,0.000006965048,0.0000054488282,0.000009783876,0.0007786322,0.9289599,0.061189346,0.008087704,0.00012584848],"about_ca_topic_score_codex":0.0000843186,"about_ca_topic_score_gemma":0.000013658884,"teacher_disagreement_score":0.049647093,"about_ca_system_score_codex":0.000015966436,"about_ca_system_score_gemma":0.000008241781,"threshold_uncertainty_score":0.36000794},"labels":[],"label_agreement":null},{"id":"W2401899855","doi":"10.1007/978-1-61779-046-1_11","title":"Live Cell Imaging of Argonaute Proteins in Mammalian Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Argonaute; Cell biology; Gene silencing; RNA interference; RNA-induced silencing complex; Biology; Piwi-interacting RNA; Effector; microRNA; RNA silencing; RNA; Small interfering RNA; Genetics; Gene","score_opus":0.022695778652798756,"score_gpt":0.351052295330193,"score_spread":0.32835651667739424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401899855","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6593511,0.0011020761,0.33648854,0.000028091194,0.000077282195,0.00034291728,0.0000070271076,0.000005094339,0.0025978398],"genre_scores_gemma":[0.3782926,0.0000800323,0.62116164,0.00012628725,0.000019576542,0.000052661293,0.000015163784,0.00002351505,0.00022850015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997724,0.0009405562,0.0003620538,0.0004437898,0.0000651863,0.0004644337],"domain_scores_gemma":[0.99932206,0.000026771271,0.00010206679,0.00042091956,0.000053289015,0.00007492341],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001204093,0.00016836521,0.00026697712,0.00020810809,0.000017183875,0.0000042598017,0.00035385365,0.00018773798,0.00004145274],"category_scores_gemma":[0.0001674342,0.00016335737,0.00009780584,0.00019286829,0.00016808462,0.0000027785215,0.00022571825,0.00021108423,0.0000057267293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008720595,0.000102523874,0.01752182,0.000029709845,0.000009735936,0.000048847895,0.00012047743,0.000012099529,0.9767298,0.00023727374,0.000009890837,0.005090581],"study_design_scores_gemma":[0.0005394157,0.00025304835,0.002305822,0.000015685166,0.0000037757209,0.0000057569223,0.00010662432,0.0001367661,0.99473137,0.0012538962,0.00048012598,0.00016770263],"about_ca_topic_score_codex":0.00063933595,"about_ca_topic_score_gemma":0.000084818006,"teacher_disagreement_score":0.28467312,"about_ca_system_score_codex":0.000017819064,"about_ca_system_score_gemma":0.00007521616,"threshold_uncertainty_score":0.66615206},"labels":[],"label_agreement":null},{"id":"W2401924370","doi":"10.1007/978-1-60761-103-5_15","title":"Immunofluorescent Microscopic Study of Meiosis in Zebrafish","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Danio; Zebrafish; Model organism; Biology; Meiosis; Vertebrate; Cell biology; Anatomy; Genetics; Gene","score_opus":0.06917983398181966,"score_gpt":0.4919244297932112,"score_spread":0.42274459581139157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2401924370","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002740471,0.99188554,0.0025325709,0.000030490852,0.00027758005,0.002299767,0.000006710546,0.000014260155,0.00021260678],"genre_scores_gemma":[0.00014299694,0.90858644,0.0908234,0.00011035637,0.000038082868,0.00017013635,0.000064480766,0.000030235646,0.00003385189],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9910889,0.006106249,0.0013713614,0.0009858562,0.000071987095,0.0003756013],"domain_scores_gemma":[0.9981064,0.00025840625,0.00036598754,0.0011309704,0.00009052484,0.000047712125],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0029590926,0.00041956943,0.0035137131,0.00061286957,0.000015722877,0.0000025159165,0.0003321289,0.000863097,0.00003225147],"category_scores_gemma":[0.0016724061,0.00031853205,0.000358678,0.0007024805,0.00022185248,0.000009722505,0.00015999147,0.0009368153,0.0000037529032],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030011672,0.002006815,0.0026394376,0.0025177198,0.0003002616,0.000110358844,0.00014804488,9.565513e-8,0.016762462,0.000030312141,0.000009833592,0.97517455],"study_design_scores_gemma":[0.0069371997,0.009992227,0.05291491,0.013966334,0.0029925779,0.00023721537,0.0002577703,0.0000023543093,0.01260976,0.0019172252,0.89661384,0.0015586029],"about_ca_topic_score_codex":0.00010639725,"about_ca_topic_score_gemma":0.000011774073,"teacher_disagreement_score":0.97361594,"about_ca_system_score_codex":0.00016921121,"about_ca_system_score_gemma":0.00018981572,"threshold_uncertainty_score":0.9999267},"labels":[],"label_agreement":null},{"id":"W2402233826","doi":"10.1007/978-1-60761-588-0_1","title":"Endogenous Antiviral Mechanisms of RNA Interference: A Comparative Biology Perspective","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Toronto General Hospital","funders":"","keywords":"RNA interference; Biology; RNA silencing; Dicer; Gene silencing; RNA; Small interfering RNA; Trans-acting siRNA; RNA-induced silencing complex; DNA-directed RNA interference; RNA-induced transcriptional silencing; Small hairpin RNA; Cell biology; Argonaute; Gene; Genetics; Computational biology","score_opus":0.22065232741370705,"score_gpt":0.4815144662364585,"score_spread":0.26086213882275144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402233826","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000103418235,0.9704331,0.023492524,0.000036223333,0.0003111065,0.0010437133,0.0011774797,0.000034373865,0.0033680606],"genre_scores_gemma":[0.00037379822,0.9232132,0.075834244,0.000030003033,0.00007061496,0.00020013873,0.00024804124,0.0000037849964,0.000026191778],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9914469,0.0062033236,0.00072403415,0.00086441403,0.000102223246,0.00065908],"domain_scores_gemma":[0.9965675,0.0025317224,0.00046990832,0.00017734672,0.00017977752,0.00007373833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019171812,0.00053354085,0.0028080698,0.00016278255,0.00008573682,0.000015111069,0.0010217701,0.0008960578,0.00009274368],"category_scores_gemma":[0.0009989263,0.0002035435,0.0005201881,0.0007433025,0.0006799577,0.000022888886,0.00067577546,0.0012078016,0.000018364512],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011184946,0.000059094502,0.0000021055669,0.00010757257,0.00011386509,0.000017095575,0.00006459246,1.5428352e-8,0.5270354,0.0130940825,0.0000031048278,0.45949188],"study_design_scores_gemma":[0.00041023738,0.0032832564,0.000012289287,0.0020892033,0.00034351653,0.00015942335,0.0008457432,0.000012815683,0.17084576,0.16726789,0.6529617,0.0017681965],"about_ca_topic_score_codex":0.0004041316,"about_ca_topic_score_gemma":0.000252349,"teacher_disagreement_score":0.6529586,"about_ca_system_score_codex":0.000095743315,"about_ca_system_score_gemma":0.000078569035,"threshold_uncertainty_score":0.8300263},"labels":[],"label_agreement":null},{"id":"W2402250138","doi":"10.1007/978-1-59745-033-1_11","title":"Enrichment of Alternatively Spliced Isoforms","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Gene isoform; Computational biology; Cell biology; Biology; Genetics; Gene","score_opus":0.03126242968373167,"score_gpt":0.4120115609877441,"score_spread":0.38074913130401244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402250138","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57558435,0.0005438836,0.42270556,0.00004193428,0.00004977474,0.00012179706,0.0000036376484,0.0000038776343,0.0009451789],"genre_scores_gemma":[0.46140227,0.00046281406,0.5369902,0.00025658688,0.000046561014,0.000043487078,0.000035887988,0.00002148655,0.0007407041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839324,0.00048762903,0.00031032323,0.00036015763,0.00009246899,0.00035621296],"domain_scores_gemma":[0.9993603,0.00004180413,0.00009521801,0.0003580576,0.00007161564,0.000073006464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007513424,0.00014427335,0.0002546902,0.00013577515,0.00003734556,0.0000024524613,0.0003051782,0.00016814031,0.000019226272],"category_scores_gemma":[0.00037152748,0.00012435489,0.0001089383,0.00017431378,0.0002125019,0.0000019095019,0.00019908119,0.00013554383,0.0000033825545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007163207,0.000059673323,0.010435559,0.000009039002,0.000041997795,0.000020785525,0.00003475632,0.000038005775,0.9814001,0.00084549957,0.000033439846,0.0070095467],"study_design_scores_gemma":[0.0006211808,0.0004704231,0.0034796388,0.0000065164845,0.0000032449664,0.000034308207,0.00002456377,0.00013614481,0.99111027,0.0007854889,0.0031854683,0.00014276047],"about_ca_topic_score_codex":0.00010312108,"about_ca_topic_score_gemma":0.000008726817,"teacher_disagreement_score":0.114284635,"about_ca_system_score_codex":0.000018136567,"about_ca_system_score_gemma":0.000071660455,"threshold_uncertainty_score":0.5071045},"labels":[],"label_agreement":null},{"id":"W2402254184","doi":"10.1007/978-1-4939-0799-1_7","title":"Yeast Two-Hybrid Liquid Screening","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Yeast; Chemistry; Food science; Biochemistry","score_opus":0.010864746865193555,"score_gpt":0.33420816715348345,"score_spread":0.3233434202882899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402254184","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19052465,0.0005359517,0.807785,0.00008363153,0.0004125771,0.00009086548,0.0000041736685,0.000022380198,0.00054081454],"genre_scores_gemma":[0.3333422,0.000042021464,0.6655637,0.00036236606,0.00043069085,0.00001821049,0.000073265015,0.000028759898,0.00013878291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982635,0.0006510968,0.0002389403,0.00048574022,0.000041684438,0.0003190381],"domain_scores_gemma":[0.99940383,0.000008746431,0.000059404985,0.00042817838,0.000040620027,0.00005919978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012422298,0.00018003125,0.00022283518,0.00010826107,0.000033140765,0.000009334546,0.00020684398,0.0001409815,0.000013871787],"category_scores_gemma":[0.0005100403,0.00017472096,0.00009126176,0.00013850555,0.00008003644,0.0000016472669,0.00012158747,0.00015746464,0.000006531857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004937852,0.000018624029,0.00010196733,0.000006828249,0.000019668862,0.0000015690105,0.000006188152,0.0006561535,0.96646905,0.0007970736,0.000044955985,0.031828545],"study_design_scores_gemma":[0.00038093474,0.00022110528,0.00007466697,0.000008058636,0.000008935098,0.000039088376,0.000004081239,0.0002761364,0.9001745,0.00025062932,0.09836411,0.00019773834],"about_ca_topic_score_codex":0.000033283224,"about_ca_topic_score_gemma":0.0000050194517,"teacher_disagreement_score":0.14281754,"about_ca_system_score_codex":0.0000072051243,"about_ca_system_score_gemma":0.000014927646,"threshold_uncertainty_score":0.7124914},"labels":[],"label_agreement":null},{"id":"W2402259734","doi":"10.1007/978-1-4939-1047-2_14","title":"Design and Fabrication of Biological Wires","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"National Heart, Lung, and Blood Institute","keywords":"Induced pluripotent stem cell; Tissue engineering; In vitro; Neuroscience; Nanotechnology; Cell biology; Computational biology; Biomedical engineering; Biology; Embryonic stem cell; Materials science; Medicine; Genetics; Gene","score_opus":0.04866106523714098,"score_gpt":0.4068605856377155,"score_spread":0.3581995204005745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402259734","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07177938,0.0030920545,0.92458475,0.00027226354,0.0000751111,0.0001145642,1.5995931e-7,0.000013595105,0.000068155474],"genre_scores_gemma":[0.21694408,0.00005727867,0.7828541,0.000048315305,0.000030326584,0.000008988501,0.0000035920523,0.000004539125,0.00004877688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895793,0.000637118,0.00014413185,0.00014437243,0.000024501805,0.00009194613],"domain_scores_gemma":[0.9995635,0.00022945681,0.000031201358,0.000113841495,0.000028687291,0.000033314158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091702957,0.00006638069,0.00024623665,0.000093186536,0.000007239482,6.2523833e-7,0.000030408688,0.00009739265,0.000007365632],"category_scores_gemma":[0.0009576442,0.00004410223,0.00001740676,0.00010270202,0.00014291922,0.0000029482508,0.000017180546,0.000083441,4.4015542e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017745428,0.00001710418,0.0032872884,0.000013739362,0.00001063293,0.0000023280131,0.0000457077,0.00008686757,0.9285478,0.005042108,0.0000058407327,0.06292286],"study_design_scores_gemma":[0.0009612811,0.0012676461,0.016043246,0.00004707958,0.000024773677,0.00004328648,0.000018259372,0.009830269,0.9643626,0.0031378197,0.0041625346,0.00010118709],"about_ca_topic_score_codex":0.000006344318,"about_ca_topic_score_gemma":6.9823734e-8,"teacher_disagreement_score":0.1451647,"about_ca_system_score_codex":0.0000066981147,"about_ca_system_score_gemma":0.0000074544346,"threshold_uncertainty_score":0.17984368},"labels":[],"label_agreement":null},{"id":"W2402270617","doi":"10.1007/978-1-62703-980-2_15","title":"Complementation of U4 snRNA in S. cerevisiae Splicing Extracts for Biochemical Studies of snRNP Assembly and Function","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Northern British Columbia","funders":"","keywords":"RNA splicing; Prp24; snRNP; Small nuclear RNA; Biology; RNA; Biochemistry; Cell biology; Genetics; Gene; Non-coding RNA","score_opus":0.058847083564683135,"score_gpt":0.469995852753977,"score_spread":0.41114876918929383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402270617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5909383,0.0013327051,0.407432,0.000048503895,0.00002982467,0.00017968389,0.0000032303847,0.000001357911,0.000034361845],"genre_scores_gemma":[0.7412991,0.00021494638,0.25828522,0.000072284034,0.00002559792,0.00003599776,0.00004317532,0.000010805288,0.000012874821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848354,0.0005409009,0.00040056248,0.00029872372,0.000054588443,0.00022169921],"domain_scores_gemma":[0.9993313,0.00021796125,0.00013975664,0.00017953246,0.000098534176,0.000032946045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018112514,0.00011305605,0.00032577373,0.00014550643,0.000018049446,0.0000031460754,0.000096147836,0.00013661095,0.0000014955219],"category_scores_gemma":[0.001193512,0.00010572694,0.000057366913,0.000122789,0.00013486251,0.0000029298312,0.000099412784,0.00007867073,8.017823e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014886314,0.000033133016,0.0056151054,0.00013047965,0.000041648167,3.3474296e-7,0.000030665862,0.00003141644,0.96798074,0.0013876626,0.0000165375,0.024583433],"study_design_scores_gemma":[0.000988831,0.0007189121,0.0036256397,0.000045111097,0.000014003418,0.0000024080418,0.00014907216,0.00080937444,0.9908886,0.0021727697,0.00048605495,0.00009921696],"about_ca_topic_score_codex":0.000045258974,"about_ca_topic_score_gemma":0.000031975746,"teacher_disagreement_score":0.15036076,"about_ca_system_score_codex":0.00001345937,"about_ca_system_score_gemma":0.000021874017,"threshold_uncertainty_score":0.43114194},"labels":[],"label_agreement":null},{"id":"W2402409849","doi":"10.1007/978-1-4939-0956-8_7","title":"G Protein-Coupled Receptor Accessory Proteins and Signaling: Pharmacogenomic Insights","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Toronto; Canada Research Chairs","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Heterotrimeric G protein; Biology; G protein; Regulator of G protein signaling; Genetics; Signal transduction; Computational biology; Cell biology; GTPase-activating protein","score_opus":0.04055626852597994,"score_gpt":0.4063347284368998,"score_spread":0.36577845991091984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402409849","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008582349,0.6824382,0.31465942,0.0000075016724,0.00028079844,0.001642503,0.000013832944,0.000021059568,0.0000784383],"genre_scores_gemma":[0.000044039098,0.68584967,0.31222254,0.00010480415,0.0003262223,0.0008373742,0.00031877428,0.00014297613,0.00015359386],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99312085,0.0035065315,0.0010921158,0.0015011012,0.000120346114,0.0006590764],"domain_scores_gemma":[0.9982962,0.00010593396,0.0006104955,0.0007111289,0.000082695056,0.0001935185],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019397808,0.0008599907,0.0020625785,0.00037911194,0.00010663094,0.000057598198,0.00073432946,0.001445075,0.00011621215],"category_scores_gemma":[0.00041654822,0.00073246507,0.00051881943,0.00029002147,0.00020004461,0.000004529574,0.00052868476,0.0006794989,0.000016118503],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020243026,0.0000328022,6.7116054e-7,0.0014752672,0.00016059114,0.000007449688,0.0000128900265,0.0000022113604,0.7080618,0.00036782876,0.000007691561,0.28985056],"study_design_scores_gemma":[0.00043025208,0.00030309873,4.2330402e-8,0.00091393176,0.00015338282,0.000023692084,0.000005875283,0.000033950877,0.30364677,0.000739855,0.6930422,0.00070692034],"about_ca_topic_score_codex":0.000017647937,"about_ca_topic_score_gemma":0.0000027586548,"teacher_disagreement_score":0.6930345,"about_ca_system_score_codex":0.00006024689,"about_ca_system_score_gemma":0.00027273965,"threshold_uncertainty_score":0.9998513},"labels":[],"label_agreement":null},{"id":"W2402494865","doi":"10.1007/978-1-4939-1016-8_25","title":"Mutant Mice and Animal Models of Airway Allergic Disease","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Mutant; Airway; Animal model; Immunology; Disease; Biology; Medicine; Pathology; Internal medicine; Genetics; Surgery","score_opus":0.019338390259139117,"score_gpt":0.31911646172107655,"score_spread":0.2997780714619374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402494865","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42299995,0.0034514517,0.57078403,0.000109473265,0.00034695605,0.0001930771,0.00019597924,0.000031714484,0.0018874034],"genre_scores_gemma":[0.88120335,0.00022392799,0.117990196,0.00033706307,0.000017851178,0.000024072659,0.000060284226,0.000022049511,0.00012122725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99677885,0.0020352283,0.00035646302,0.0004306369,0.000018691748,0.00038012068],"domain_scores_gemma":[0.9992192,0.00024960047,0.00011404605,0.00032156968,0.00005276552,0.00004286471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010138515,0.00020171319,0.0004549459,0.00015384493,0.00005269055,0.000003286065,0.00022038136,0.00032209887,0.00003682452],"category_scores_gemma":[0.00044527158,0.00017691318,0.00008374102,0.00013854625,0.00043302387,0.000030588308,0.0001649123,0.00024556174,0.000012541232],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020954658,0.000071201954,0.0004416058,0.00003357135,0.00005356501,0.000008227967,0.0002073546,0.00003127466,0.959469,0.033554677,0.000019355182,0.0059006196],"study_design_scores_gemma":[0.0019711077,0.000731724,0.0011550613,0.000039978953,0.00006999372,0.00004614085,0.000092630486,0.0010756879,0.9229775,0.04835269,0.023076154,0.0004113486],"about_ca_topic_score_codex":0.00006146329,"about_ca_topic_score_gemma":0.000009904127,"teacher_disagreement_score":0.45820338,"about_ca_system_score_codex":0.000013298136,"about_ca_system_score_gemma":0.00005233642,"threshold_uncertainty_score":0.721431},"labels":[],"label_agreement":null},{"id":"W2402573146","doi":"10.1007/978-1-4939-3664-9_6","title":"Generation and Use of Trophoblast Stem Cells and Uterine Myocytes to Study the Role of Connexins for Pregnancy and Labor","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft","keywords":"Connexin; Trophoblast; Cell biology; Biology; Gap junction; Conceptus; Stem cell; Myocyte; Myometrium; Cell culture; Internal medicine; Endocrinology; Fetus; Placenta; Pregnancy; Genetics; Uterus; Medicine","score_opus":0.058266889161593484,"score_gpt":0.3820001627028108,"score_spread":0.3237332735412173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402573146","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8873412,0.0075405985,0.104052275,0.00020086163,0.000030793206,0.000792241,0.00003148902,0.0000035553087,0.0000069828775],"genre_scores_gemma":[0.7830453,0.0008615383,0.21587591,0.00007459973,0.0000103344,0.00009788462,6.5024335e-7,0.00000737536,0.000026413154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906963,0.00041752204,0.0001978055,0.00019077388,0.000026732294,0.000097516764],"domain_scores_gemma":[0.9992442,0.00045867823,0.00006182765,0.0001600882,0.000050200913,0.000024991165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003398607,0.000086498214,0.00029023318,0.000053096766,0.000023700495,0.0000026084685,0.00003294023,0.000050660743,0.0000018919814],"category_scores_gemma":[0.00015966632,0.000047320184,0.000017348599,0.00005600267,0.00013237204,0.000015669284,0.000094621595,0.00003029316,3.833895e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012669247,0.000041731117,0.041624196,0.000037827216,0.00007101886,0.0000014449652,0.0007174367,3.5730875e-7,0.8287753,0.00083486753,8.0512433e-7,0.12776831],"study_design_scores_gemma":[0.0015460739,0.0017275144,0.02125792,0.00014800721,0.00006698059,0.0000055413343,0.00025940617,0.00006420318,0.9731906,0.0010640235,0.00060469547,0.000065008106],"about_ca_topic_score_codex":0.000015201244,"about_ca_topic_score_gemma":0.000017512404,"teacher_disagreement_score":0.14441532,"about_ca_system_score_codex":0.000003930548,"about_ca_system_score_gemma":0.000008504056,"threshold_uncertainty_score":0.1929661},"labels":[],"label_agreement":null},{"id":"W2402808915","doi":"10.1007/978-1-61779-585-5_4","title":"Philosophy and Evolution: Minding the Gap Between Evolutionary Patterns and Tree-Like Patterns","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Evolutionary Game Theory and Cooperation","field":"Social Sciences","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Tree of life (biology); Evolutionism; Evolutionary biology; Range (aeronautics); Human evolutionary genetics; Biology; Evolutionary dynamics; Modern evolutionary synthesis; Evolutionary ecology; Phylogenetics; Ecology; Sociology; Genetics; Population; Gene","score_opus":0.0511631853126477,"score_gpt":0.39670522421296156,"score_spread":0.3455420389003139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402808915","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42580718,0.0038003745,0.5644101,0.0024888765,0.00037370122,0.0002930517,0.000024523371,0.000033191405,0.0027690006],"genre_scores_gemma":[0.96931404,0.00017829267,0.029644754,0.0002834865,0.00043596196,0.00003732856,0.000019159856,0.00000897133,0.00007799918],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9953094,0.0037787603,0.00020584016,0.00024149408,0.00009876069,0.0003657207],"domain_scores_gemma":[0.9991349,0.00051509385,0.00006686053,0.00015833515,0.000032181415,0.00009261971],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023318257,0.000125172,0.00017093506,0.0001029959,0.0004367255,0.000017914137,0.00015769603,0.00018883543,0.000047388567],"category_scores_gemma":[0.00022370485,0.000102426486,0.00003831661,0.00019435048,0.00046014716,0.00014789516,0.000115370225,0.0002030424,0.0000036087545],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009194117,0.000022146321,0.6881078,0.000007657776,0.000018899796,0.0000013862581,0.0020549747,0.000001861916,0.0026140665,0.29662392,0.000009061768,0.010529035],"study_design_scores_gemma":[0.00047212536,0.00013338446,0.7344498,0.000049369268,0.000067639165,0.000022485272,0.0028309796,0.000103913575,0.0005215501,0.2540476,0.0068888576,0.00041228483],"about_ca_topic_score_codex":0.00035670245,"about_ca_topic_score_gemma":0.00012331243,"teacher_disagreement_score":0.54350686,"about_ca_system_score_codex":0.00008596581,"about_ca_system_score_gemma":0.000037107806,"threshold_uncertainty_score":0.4176831},"labels":[],"label_agreement":null},{"id":"W2402856136","doi":"10.1007/978-1-59745-557-2_15","title":"In Vivo Imaging of Oligonucleotidic Aptamers","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Agence Nationale de la Recherche; Institut National Du Cancer; Fondation de France; Association pour la Recherche sur le Cancer","keywords":"Aptamer; Positron emission tomography; In vivo; Preclinical imaging; Molecular imaging; Pet imaging; Labelling; Positron; Optical imaging; Fluorescence; Chemistry; Medical physics; Nanotechnology; Biomedical engineering; Materials science; Nuclear medicine; Molecular biology; Medicine; Biology; Optics; Physics; Biochemistry; Genetics; Nuclear physics","score_opus":0.009764044917254756,"score_gpt":0.37890375820525724,"score_spread":0.3691397132880025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2402856136","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32137638,0.0011647056,0.6742521,0.0006055528,0.000100220255,0.00020662571,0.000008018875,0.000025956493,0.0022604119],"genre_scores_gemma":[0.5273672,0.00014222952,0.47168913,0.000730708,0.00002001885,0.0000031082802,0.000007934135,0.000009100868,0.00003056608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983395,0.00050437066,0.0003844309,0.00042158103,0.000051538926,0.0002986011],"domain_scores_gemma":[0.99939996,0.00002306271,0.00012182608,0.00037429747,0.0000438157,0.000037058348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007731517,0.00017229367,0.0003220443,0.00025685778,0.0000144708265,0.000003817473,0.00020788016,0.00017951355,0.0000040342843],"category_scores_gemma":[0.00024287462,0.00016331322,0.00012488836,0.0003415126,0.00016731939,0.0000028779782,0.000067981055,0.000134881,3.1488761e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003568486,0.000058150363,0.0023384804,0.0000037080904,0.000010656643,0.000016077718,0.000011889092,0.000012987233,0.9778349,0.0005705638,0.00003968599,0.019067215],"study_design_scores_gemma":[0.00028206783,0.00016900925,0.00047065775,0.000015372258,0.0000092864575,0.000014126836,0.00003037675,0.00012397503,0.99067473,0.005436927,0.0025947194,0.00017873589],"about_ca_topic_score_codex":0.000028258723,"about_ca_topic_score_gemma":0.000012391793,"teacher_disagreement_score":0.20599079,"about_ca_system_score_codex":0.000019232803,"about_ca_system_score_gemma":0.000026532896,"threshold_uncertainty_score":0.665972},"labels":[],"label_agreement":null},{"id":"W2403022727","doi":"10.1007/978-1-61779-043-0_8","title":"SPOT Synthesis as a Tool to Study Protein–Protein Interactions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kinexus Bioinformatics Corporation (Canada)","funders":"","keywords":"Peptide; Cellulose; Combinatorial chemistry; Membrane; Chemistry; Biochemistry; Computational biology; Biology","score_opus":0.03579525795380775,"score_gpt":0.41278639223841934,"score_spread":0.3769911342846116,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403022727","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4660345,0.000025586356,0.531982,0.00009195396,0.000029039844,0.00089411397,0.0000049450346,0.00003198288,0.0009058528],"genre_scores_gemma":[0.4347664,0.0000022234567,0.56404376,0.00020319608,0.000023093928,0.00079555594,0.0000060239327,0.000021883974,0.00013788928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981146,0.0005741655,0.00032744804,0.0006238153,0.000052034648,0.00030796544],"domain_scores_gemma":[0.99900204,0.000022491802,0.000087934204,0.0007404804,0.0000724192,0.00007462887],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060256553,0.00021439129,0.00023261542,0.00013596004,0.00007167413,0.000009467641,0.0003243571,0.0001636193,0.00005259322],"category_scores_gemma":[0.0007080209,0.00020588718,0.0000932726,0.00026940805,0.00007586925,0.0000027817096,0.00028846558,0.00016759321,0.000020581487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008233046,0.0003004294,0.00017421458,0.000002684853,0.000033908582,0.000012850954,0.00006457352,0.000001590046,0.95325875,0.002464696,0.000009344248,0.043594632],"study_design_scores_gemma":[0.00015758595,0.00058141,0.00026892574,0.000014659894,0.000014695882,0.000018466064,0.00008892461,0.0000054841007,0.9776792,0.011927766,0.008978085,0.0002648231],"about_ca_topic_score_codex":0.00010033694,"about_ca_topic_score_gemma":0.000026645537,"teacher_disagreement_score":0.04332981,"about_ca_system_score_codex":0.000023520546,"about_ca_system_score_gemma":0.00003428786,"threshold_uncertainty_score":0.8395835},"labels":[],"label_agreement":null},{"id":"W2403030412","doi":"10.1007/978-1-59745-554-1_10","title":"Selection of Non-aggregating VH Binders from Synthetic VH Phage-Display Libraries","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Panning (audio); Phage display; Phagemid; Immunogenicity; Recombinant DNA; Biology; Monoclonal antibody; Epitope; Computational biology; Peptide library; Escherichia coli; Gene; Molecular biology; Antibody; Genetics; Bacteriophage; Peptide sequence","score_opus":0.03774973762429474,"score_gpt":0.4075455495261056,"score_spread":0.3697958119018109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403030412","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76330286,0.0010261177,0.23313735,0.0004268652,0.00012272551,0.0002144629,0.000011090414,0.00002117102,0.0017373589],"genre_scores_gemma":[0.3365197,0.00018328712,0.6625503,0.00027726078,0.00007007951,0.000019746914,0.000034063767,0.000021105938,0.00032447238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980814,0.00073283364,0.00036392894,0.0003440705,0.00014476481,0.0003330249],"domain_scores_gemma":[0.99898887,0.0005854274,0.000101631085,0.00017519377,0.000061569444,0.00008730771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005074842,0.00016386503,0.00047499116,0.00023032754,0.00007341731,0.0000045255506,0.00014121812,0.00017704612,0.00022746877],"category_scores_gemma":[0.0005975105,0.00013280903,0.00013219929,0.00038571237,0.0004329996,0.000032080647,0.00010271797,0.00036436276,0.000010663234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024521997,0.00008644166,0.046537135,0.00005049078,0.000098821394,0.00013937487,0.00025392766,0.000012783965,0.9330088,0.0006013536,0.000039439547,0.018926213],"study_design_scores_gemma":[0.0008096853,0.00047001377,0.015719319,0.00010436574,0.000035080702,0.00013341387,0.000076405486,0.0039945217,0.97386444,0.0029672694,0.0016619758,0.00016353432],"about_ca_topic_score_codex":0.00066229125,"about_ca_topic_score_gemma":0.0000109797365,"teacher_disagreement_score":0.42941293,"about_ca_system_score_codex":0.000027989006,"about_ca_system_score_gemma":0.00012947076,"threshold_uncertainty_score":0.54157954},"labels":[],"label_agreement":null},{"id":"W2403066465","doi":"10.1007/978-1-4939-3566-6_17","title":"Cytofluorometric Quantification of Cell Death Elicited by NLR Proteins","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer","keywords":"Intracellular; Biology; Programmed cell death; Innate immune system; Cell biology; Cell; Receptor; Immune system; Secretion; Immunology; Apoptosis; Biochemistry","score_opus":0.01571279248304762,"score_gpt":0.33869224241240325,"score_spread":0.3229794499293556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403066465","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3389744,0.0015411376,0.6583952,0.00007298171,0.00006193079,0.00023359127,0.000017675578,0.0000073167794,0.00069579197],"genre_scores_gemma":[0.69715196,0.00040816184,0.30160797,0.00014004299,0.000018446242,0.0000892935,0.00011923502,0.000033163586,0.0004317523],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804974,0.0007406683,0.00041138224,0.00042419293,0.00006514817,0.00030888635],"domain_scores_gemma":[0.99911976,0.00005467816,0.00017911383,0.00051397417,0.00009532695,0.00003712041],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080382876,0.00017752397,0.0002519223,0.00024595743,0.000024985811,0.000004249102,0.00030267253,0.00030663674,0.000028163286],"category_scores_gemma":[0.0005363756,0.00013657557,0.00011193116,0.00038022088,0.00012520513,0.0000031611032,0.00010417564,0.000077360564,0.000007887585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005849822,0.00009329471,0.0027927961,0.000014826421,0.000020485246,8.7885877e-7,0.0000112687785,0.000002425485,0.98171854,0.00044280748,0.00007691449,0.014767266],"study_design_scores_gemma":[0.00075376075,0.00037452442,0.0007276514,0.000008125814,0.0000104501005,0.0000021207125,0.000015864762,0.000010078652,0.9874719,0.0006795788,0.009755809,0.00019017435],"about_ca_topic_score_codex":0.00003262157,"about_ca_topic_score_gemma":0.0000025395798,"teacher_disagreement_score":0.35817757,"about_ca_system_score_codex":0.000016524462,"about_ca_system_score_gemma":0.000046649642,"threshold_uncertainty_score":0.556939},"labels":[],"label_agreement":null},{"id":"W2403098959","doi":"10.1007/978-1-4939-2398-4_7","title":"Essential Genes in the Infection Model of Pseudomonas aeruginosa-PCR-Based Signature-Tagged Mutagenesis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Pseudomonas aeruginosa; Mutagenesis; Signature (topology); Gene; Biology; Genetics; Computational biology; Microbiology; Mutation; Bacteria","score_opus":0.02892372870465476,"score_gpt":0.3472297771487894,"score_spread":0.3183060484441346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403098959","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6852155,0.0006071957,0.31344336,0.00015312278,0.0002153756,0.0001980844,0.000009093405,0.000006759158,0.00015154626],"genre_scores_gemma":[0.73683435,0.000046295532,0.26242086,0.00047900583,0.000077272045,0.000022324488,0.00008980451,0.000020115105,0.000009957712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971282,0.0016263835,0.00039883464,0.00042765876,0.00009965079,0.0003192652],"domain_scores_gemma":[0.9992038,0.000053928663,0.00015157185,0.00044189297,0.000097217315,0.000051609637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017208346,0.00021886938,0.00031241184,0.00016337734,0.000030645835,0.000013723991,0.0002452734,0.00046589843,0.000003271416],"category_scores_gemma":[0.00033800188,0.00017396499,0.00013801047,0.00027944037,0.00018006323,0.0000037000816,0.00009915646,0.00014886547,8.061897e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016253178,0.00009730745,0.0022443968,0.000013048452,0.000020004098,0.0000075285125,0.000056790504,0.006325339,0.98637134,0.00028555296,0.000021710137,0.0043944507],"study_design_scores_gemma":[0.0008628855,0.00023780744,0.0003789738,0.000010097244,0.00002221766,0.000010097241,0.00003291525,0.004229985,0.9925619,0.0005348416,0.0009111095,0.00020721425],"about_ca_topic_score_codex":0.00024054124,"about_ca_topic_score_gemma":0.00013583891,"teacher_disagreement_score":0.0516189,"about_ca_system_score_codex":0.000020812528,"about_ca_system_score_gemma":0.00015570354,"threshold_uncertainty_score":0.70940864},"labels":[],"label_agreement":null},{"id":"W2403415052","doi":"10.1007/978-1-62703-974-1_9","title":"Imaging Neural Development in Embryonic and Larval Sea Urchins","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Embryo; Blastomere; In situ hybridization; Nervous system; Embryogenesis; Embryonic stem cell; Neural cell; Neural development; Neuroscience; Sea urchin; Cell biology; Cell type; Gene expression; Gene; Cell; Genetics","score_opus":0.034740940216067814,"score_gpt":0.4044554212964554,"score_spread":0.36971448108038757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403415052","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9609604,0.00013223544,0.03736767,0.0004461547,0.00020032063,0.00017596393,0.0000012918895,0.000028892542,0.00068710494],"genre_scores_gemma":[0.92413473,0.000026225864,0.0732706,0.0024434358,0.000019833153,0.000044125132,0.0000037849084,0.000017249224,0.000039994473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9932733,0.0052179834,0.00025337265,0.0006528706,0.00004743087,0.00055500405],"domain_scores_gemma":[0.9987809,0.00085231446,0.000048221515,0.00024551232,0.000011880143,0.00006115534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001580865,0.00016946938,0.0002946931,0.00029760078,0.00008372242,0.0000113526885,0.000320913,0.00013312217,0.000015420652],"category_scores_gemma":[0.0015845345,0.00015044467,0.000033429435,0.0002946519,0.00047233162,0.000042983385,0.00033949368,0.00059386564,0.000011110584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003950789,0.00003510652,0.025785549,0.0000076173947,0.0000016904203,0.000039400995,0.0000762264,0.000022394543,0.94960517,0.0031250813,0.0000030236624,0.021259265],"study_design_scores_gemma":[0.0007753442,0.00016951961,0.030581139,0.000009896271,0.000002078525,0.00010413705,0.000008805304,0.005418123,0.9490161,0.011670899,0.0019961917,0.00024777345],"about_ca_topic_score_codex":0.000016715343,"about_ca_topic_score_gemma":0.000018735553,"teacher_disagreement_score":0.036825612,"about_ca_system_score_codex":0.000025240244,"about_ca_system_score_gemma":0.000046495992,"threshold_uncertainty_score":0.6134955},"labels":[],"label_agreement":null},{"id":"W2403437089","doi":"10.1007/978-1-59745-390-5_16","title":"Predicting Survival in Follicular Lymphoma Using Tissue Microarrays","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Queen's University","funders":"","keywords":"Subgroup analysis; Follicular lymphoma; Medicine; Internal medicine; Oncology; Survival analysis; Stage (stratigraphy); Lymphoma; Meta-analysis; Biology","score_opus":0.10089952908173933,"score_gpt":0.49017067136753983,"score_spread":0.3892711422858005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403437089","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006188379,0.923888,0.07269737,0.00001603421,0.0005817208,0.0013897895,0.000018344943,0.00003692543,0.0007529247],"genre_scores_gemma":[0.000007853734,0.60516834,0.3943033,0.00008295742,0.00010331591,0.0001143746,0.00012466554,0.00007375269,0.000021453305],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99419266,0.0025349406,0.0012980289,0.0010090105,0.00016253337,0.00080283487],"domain_scores_gemma":[0.99797326,0.00073958543,0.0003624422,0.00071851234,0.00004955724,0.00015661148],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027397117,0.00069118314,0.0033922393,0.000961018,0.000039898507,0.000015494585,0.00025262166,0.0012351833,0.00003187181],"category_scores_gemma":[0.00057849,0.0005607316,0.0005790961,0.00095843646,0.0001440088,0.000017959435,0.00020285262,0.00035807694,0.0000134897955],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022227563,0.0003652881,0.0034750614,0.0023652017,0.00031092265,0.002791138,0.000042492746,0.0000024666406,0.0012845087,0.00027336623,0.0000016827939,0.98906565],"study_design_scores_gemma":[0.0032384836,0.00034916104,0.0002808238,0.010363555,0.0015251213,0.0011807528,0.000029482768,0.00006502945,0.004600713,0.00019015143,0.9774392,0.00073749415],"about_ca_topic_score_codex":0.0008039286,"about_ca_topic_score_gemma":0.00005620207,"teacher_disagreement_score":0.98832816,"about_ca_system_score_codex":0.0008590017,"about_ca_system_score_gemma":0.00048544962,"threshold_uncertainty_score":0.9996844},"labels":[],"label_agreement":null},{"id":"W2403605756","doi":"10.1007/978-1-62703-586-6_9","title":"Recombinant Genetic Libraries and Human Monoclonal Antibodies","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"","keywords":"Monoclonal antibody; Computational biology; Human proteome project; Phage display; Biology; Proteome; Antigen; Peptide library; Epitope; Complementarity determining region; Repertoire; Antibody; Genetics; Proteomics; Peptide sequence; Gene","score_opus":0.03767881329484886,"score_gpt":0.42111441998063165,"score_spread":0.3834356066857828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403605756","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.961393,0.004390021,0.027630398,0.0024567642,0.00012103255,0.00042493196,0.0000028788668,0.000030849773,0.003550119],"genre_scores_gemma":[0.06933434,0.00043282946,0.9274651,0.00084235554,0.000059983293,0.000074269854,0.00002632735,0.000024921033,0.0017399013],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99825513,0.00055010355,0.00031385518,0.0003732808,0.0000909141,0.00041668396],"domain_scores_gemma":[0.9993282,0.00019789718,0.00004503852,0.00023004926,0.000056444944,0.00014240005],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036738222,0.00018224958,0.00042455032,0.00021780706,0.00008258913,0.000029165327,0.00012537147,0.00016662574,0.00035015072],"category_scores_gemma":[0.00016685753,0.00013772844,0.00007751255,0.00015980528,0.0004704816,0.00004061855,0.00023238383,0.0003024262,0.00002696342],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041980333,0.00007668985,0.25589177,0.000073423325,0.00005743551,0.000106791085,0.00007932816,5.4154367e-7,0.6772747,0.019932304,0.00019020766,0.046274833],"study_design_scores_gemma":[0.001273586,0.0011432258,0.69173026,0.000085904496,0.000037035345,0.00036577467,0.00008936468,0.00040934296,0.13337712,0.15353505,0.017551148,0.00040220877],"about_ca_topic_score_codex":0.00063366845,"about_ca_topic_score_gemma":0.000007706031,"teacher_disagreement_score":0.8998347,"about_ca_system_score_codex":0.000015168718,"about_ca_system_score_gemma":0.000043083972,"threshold_uncertainty_score":0.56164026},"labels":[],"label_agreement":null},{"id":"W2403610646","doi":"10.1007/978-1-61779-361-5_12","title":"Algorithms for Systematic Identification of Small Subgraphs","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Biological network; Identification (biology); Computer science; Computational biology; Strengths and weaknesses; Graph; Task (project management); Data science; Artificial intelligence; Machine learning; Theoretical computer science; Biology; Engineering","score_opus":0.038631165569062535,"score_gpt":0.3562136608874269,"score_spread":0.31758249531836436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403610646","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08007814,0.0014918452,0.9176418,0.000007073553,0.000119553406,0.00055250013,0.000007869921,0.000006809179,0.00009436961],"genre_scores_gemma":[0.20750733,0.00004041191,0.7919554,0.00004562856,0.000029250503,0.00024631957,0.00006678031,0.000026585149,0.00008229136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977253,0.00091189175,0.0006516535,0.00042202405,0.00004461126,0.0002445198],"domain_scores_gemma":[0.9988391,0.000050334886,0.00031464183,0.00061591563,0.00013779836,0.000042226813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020079443,0.00016112419,0.00041116113,0.00018381613,0.00002353398,0.000003750422,0.00032164284,0.0002585645,0.000005495737],"category_scores_gemma":[0.0003930452,0.00015175612,0.00025233073,0.00024893068,0.00012014906,0.000001176848,0.000077079916,0.000052396543,0.0000010054664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028600833,0.00005433334,0.0019363125,0.0005947167,0.0001564992,8.8271383e-7,0.00005475043,0.00006321693,0.99447036,0.0014693232,0.00000509131,0.001165895],"study_design_scores_gemma":[0.00030561516,0.00019135165,0.0007038007,0.00006433087,0.0001085741,0.000006092335,0.00005521839,0.0012529194,0.9910726,0.006002232,0.00006460237,0.00017268129],"about_ca_topic_score_codex":0.0000159496,"about_ca_topic_score_gemma":0.000020424359,"teacher_disagreement_score":0.12742919,"about_ca_system_score_codex":0.000010427135,"about_ca_system_score_gemma":0.000031086664,"threshold_uncertainty_score":0.6188435},"labels":[],"label_agreement":null},{"id":"W2403668322","doi":"10.1007/978-1-61779-977-8_11","title":"Identifying Postmortem Microstructural Change to Skeletal and Dental Tissues using Backscattered Electron Imaging","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Forensic Anthropology and Bioarchaeology Studies","field":"Arts and Humanities","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Scanning electron microscope; Materials science; Biomedical engineering; Medicine; Composite material","score_opus":0.1413384151995108,"score_gpt":0.4718288455924583,"score_spread":0.3304904303929475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403668322","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005181994,0.9941173,0.002694147,0.0002175691,0.001660572,0.00057960884,0.000045377776,0.000031725755,0.00013548273],"genre_scores_gemma":[0.00041485656,0.8541177,0.1432401,0.00064813055,0.0010428439,0.000111518086,0.00016789699,0.000089917,0.00016703778],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99682677,0.0012633941,0.0005089462,0.0005921682,0.00005517137,0.00075355446],"domain_scores_gemma":[0.9993148,0.00013472798,0.00021228698,0.00022321109,0.000042102078,0.00007290427],"candidate_categories":["metaepi_narrow","sts"],"consensus_categories":[],"category_scores_codex":[0.0006467123,0.0005075022,0.0014261819,0.00039247796,0.0002732349,0.00003415783,0.00024701623,0.000311378,0.00016271349],"category_scores_gemma":[0.000042125586,0.00040478742,0.00022152359,0.000077729455,0.005284929,0.000059906833,0.0005949191,0.0005267794,0.000016919],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000103467955,0.000020173338,0.0005567433,0.0013739689,0.00032579093,0.00008177563,0.004957289,7.2488637e-9,0.00050345703,0.03591868,0.000021564332,0.9562302],"study_design_scores_gemma":[0.00023678874,0.00015618745,0.000033180248,0.001153917,0.0009761966,0.00080090214,0.0029904838,0.0000030060555,0.0003297489,0.0023611302,0.98995763,0.001000801],"about_ca_topic_score_codex":0.002052687,"about_ca_topic_score_gemma":0.0022163857,"teacher_disagreement_score":0.9899361,"about_ca_system_score_codex":0.00008477731,"about_ca_system_score_gemma":0.00002574303,"threshold_uncertainty_score":0.9998404},"labels":[],"label_agreement":null},{"id":"W2403699189","doi":"10.1007/978-1-61779-442-1_12","title":"Rho GTPase Techniques in Osteoclastogenesis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bone Metabolism and Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"RANKL; Cell biology; Osteoclast; GTPase; Podosome; Actin cytoskeleton; Activator (genetics); Cytoskeleton; Chemistry; Biology; In vitro; Receptor; Cell; Biochemistry","score_opus":0.025915146838273836,"score_gpt":0.3630322029430711,"score_spread":0.33711705610479725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403699189","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4814269,0.006153252,0.50397724,0.00005525987,0.00025162013,0.00042223991,0.00002292231,0.00004420209,0.007646357],"genre_scores_gemma":[0.22817943,0.00028424585,0.77036226,0.0007652471,0.00006143645,0.00016265434,0.000052740375,0.000038005946,0.00009399043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976577,0.0010046735,0.00034837928,0.0005479102,0.000048862737,0.00039246355],"domain_scores_gemma":[0.99925643,0.000024425133,0.0000729492,0.00052146526,0.000037913494,0.00008681825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007925138,0.00022281299,0.000304647,0.00023177524,0.000021459335,0.000005671975,0.00030668222,0.00033854364,0.000057843215],"category_scores_gemma":[0.00036695422,0.00021534477,0.00012132489,0.00025850756,0.00016458597,0.0000030380077,0.00022020913,0.00012304467,0.000006123702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011596341,0.00013125972,0.020582873,0.000009879182,0.000013879348,0.000037969567,0.00004022241,0.0000011538656,0.93703353,0.0011923633,0.00003119694,0.040809687],"study_design_scores_gemma":[0.0004290425,0.00018561153,0.007977212,0.000009303545,0.000014643806,0.000013354534,0.000039935527,0.00000485659,0.9765457,0.0041687256,0.010335815,0.00027580457],"about_ca_topic_score_codex":0.00015627532,"about_ca_topic_score_gemma":0.00007792698,"teacher_disagreement_score":0.26638502,"about_ca_system_score_codex":0.000012378936,"about_ca_system_score_gemma":0.00006646493,"threshold_uncertainty_score":0.87815046},"labels":[],"label_agreement":null},{"id":"W2403728425","doi":"10.1007/978-1-4939-1438-8_7","title":"Approaches for Studying mRNA Decay Mediated by SIDER2 Retroposons in Leishmania","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Retroposon; Biology; Polyadenylation; Messenger RNA; Cleavage (geology); Gene expression; Transcription (linguistics); Gene; Genetics; Subfamily; Molecular biology; Cell biology; Transposable element; Genome","score_opus":0.08610215690886694,"score_gpt":0.42737950383231704,"score_spread":0.34127734692345013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403728425","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08579712,0.0007414158,0.90732884,0.0029599909,0.00006044144,0.0009266777,0.000021218839,0.000035327746,0.0021289296],"genre_scores_gemma":[0.3116778,0.000055154676,0.6869821,0.00051076396,0.000045735924,0.0004087034,0.00017002434,0.000032715936,0.000116983756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99762464,0.0009987493,0.0003563767,0.00043385167,0.000092946866,0.0004934482],"domain_scores_gemma":[0.99845594,0.0008794287,0.0000623724,0.00041922525,0.000055471395,0.00012758902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006014799,0.00014931208,0.00041792454,0.00028142505,0.000047111233,0.000011276681,0.00019831567,0.00021256479,0.000028243483],"category_scores_gemma":[0.0030027477,0.00013076098,0.0000815856,0.00043279747,0.00016330488,0.000022129261,0.000089769994,0.0003247478,0.000006254303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067786,0.00016000494,0.012138847,0.000029585297,0.000033586904,0.0000044633,0.00008120551,0.0000037826578,0.9497625,0.0062245107,0.00028821413,0.031205483],"study_design_scores_gemma":[0.010665291,0.0030182803,0.15929943,0.00010792258,0.000090660214,0.00007922878,0.0010105855,0.010566115,0.6611522,0.025684062,0.12746605,0.0008601634],"about_ca_topic_score_codex":0.00006837773,"about_ca_topic_score_gemma":0.000056861372,"teacher_disagreement_score":0.28861034,"about_ca_system_score_codex":0.00009844496,"about_ca_system_score_gemma":0.000067621826,"threshold_uncertainty_score":0.5332278},"labels":[],"label_agreement":null},{"id":"W2403845687","doi":"10.1007/978-1-61737-988-8_24","title":"Agrobacterium tumefaciens-Mediated Genetic Transformation of Cereals Using Immature Embryos","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Agrobacterium tumefaciens; Agrobacterium; Transformation (genetics); Biology; Callus; Crop; Cultivar; Embryo; Botany; Horticulture; Cell biology; Agronomy; Genetics; Gene","score_opus":0.013779336692738372,"score_gpt":0.3363308445625995,"score_spread":0.3225515078698611,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403845687","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67721105,0.00050206005,0.32153514,0.00005405656,0.00029470687,0.00017294686,0.000031024552,0.0000068025574,0.0001922043],"genre_scores_gemma":[0.4560721,0.00010462135,0.54270595,0.00017489045,0.00013484058,0.000018679204,0.0006806357,0.000023855038,0.00008446204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986837,0.00037712636,0.00035636124,0.000292695,0.00005540292,0.00023474828],"domain_scores_gemma":[0.99943566,0.000015660884,0.00012995877,0.00028434294,0.000082678846,0.00005168588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042101037,0.00016660418,0.00023782023,0.00010084952,0.000034597648,0.0000079569,0.00018233749,0.0005144709,0.000017093776],"category_scores_gemma":[0.00017192512,0.00014196652,0.00008788991,0.00015588719,0.000119241246,0.0000041476437,0.00003878828,0.00019693775,0.0000016031097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031943877,0.000029423623,0.00041093453,0.000019686899,0.000024524345,0.0000036850818,0.00009440942,0.00014327273,0.99636436,0.00017102169,0.000018286415,0.0026884761],"study_design_scores_gemma":[0.00035182017,0.00009745012,0.0015033669,0.000007364499,0.000018868652,0.00007850916,0.000021418979,0.00058896834,0.99071336,0.00015124251,0.0062977937,0.00016984162],"about_ca_topic_score_codex":0.00010722041,"about_ca_topic_score_gemma":0.00021013423,"teacher_disagreement_score":0.2211708,"about_ca_system_score_codex":0.000008083649,"about_ca_system_score_gemma":0.000079890546,"threshold_uncertainty_score":0.5789227},"labels":[],"label_agreement":null},{"id":"W2403953652","doi":"10.1007/978-1-4939-2152-2_12","title":"High-Throughput Cell Death Assays","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Throughput; High-throughput screening; Computer science; Modalities; Reliability engineering; Biochemical engineering; Engineering; Bioinformatics; Biology; Telecommunications","score_opus":0.011899878069424063,"score_gpt":0.36496546536087904,"score_spread":0.353065587291455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403953652","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.052121487,0.00049221254,0.9377388,0.000083884566,0.00007235692,0.00015576338,0.0000019439801,0.00004073655,0.009292855],"genre_scores_gemma":[0.16079222,0.00012907543,0.8372587,0.0010991337,0.000109820394,0.000051323572,0.00012196268,0.000041774478,0.00039600677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99664384,0.0016980545,0.00038680242,0.00075662025,0.000077233286,0.00043743075],"domain_scores_gemma":[0.9987051,0.000074941796,0.00013008383,0.00093817135,0.00007526023,0.00007644138],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018311032,0.00026863592,0.00039368463,0.00016147236,0.000042372183,0.000018470977,0.0004572278,0.00042693768,0.000042095573],"category_scores_gemma":[0.0005551617,0.0002620236,0.00018948385,0.00021386523,0.00012880388,0.0000027109595,0.00032678683,0.00021864989,0.000015642827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015207588,0.00006630271,0.002029601,0.000008566808,0.000029351966,0.0000072733806,0.0000075777507,0.000040686966,0.9834842,0.0024603466,0.0003828904,0.011467957],"study_design_scores_gemma":[0.00037883816,0.00027928603,0.00020603483,0.0000040613595,0.000029127314,0.0000081980415,0.000006127084,0.00021802753,0.940705,0.010004815,0.04787114,0.0002893307],"about_ca_topic_score_codex":0.00012704088,"about_ca_topic_score_gemma":0.000023938877,"teacher_disagreement_score":0.108670734,"about_ca_system_score_codex":0.000024935869,"about_ca_system_score_gemma":0.000033541164,"threshold_uncertainty_score":0.9999832},"labels":[],"label_agreement":null},{"id":"W2403954431","doi":"10.1007/978-1-62703-523-1_2","title":"Activating the NLRP3 Inflammasome Using the Amyloidogenic Peptide IAPP","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Amyloidosis: Diagnosis, Treatment, Outcomes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"National Medical Research Council; National Health and Medical Research Council; Canadian Institutes of Health Research; Canadian Diabetes Association","keywords":"Inflammasome; Amylin; Amyloid (mycology); Chemistry; Innate immune system; Cell biology; Proinflammatory cytokine; Peptide; Extracellular; Islet; Biochemistry; Inflammation; Receptor; Biology; Immunology","score_opus":0.027103116275784447,"score_gpt":0.3766404538741691,"score_spread":0.3495373375983847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2403954431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80254763,0.0021560295,0.1922265,0.0013971275,0.00025162922,0.0008261542,0.0000056428003,0.000024556766,0.0005647124],"genre_scores_gemma":[0.66371286,0.00028702748,0.33183417,0.0029416974,0.00024549753,0.00061436545,0.000041253174,0.000085916814,0.00023723388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958112,0.002211672,0.0004897053,0.0006419506,0.00011789791,0.0007275661],"domain_scores_gemma":[0.99802905,0.00049936876,0.0002529203,0.0010535057,0.000088975255,0.000076148724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013441548,0.00038095334,0.00035625795,0.000094915784,0.00024652385,0.000056553232,0.0007761198,0.00035115864,0.00009619074],"category_scores_gemma":[0.0013067493,0.00023092228,0.0002697471,0.00032501694,0.0004051181,0.000008508554,0.0006059262,0.00035368509,0.000022264694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000130237895,0.000043027474,0.026370069,0.0000058831347,0.00016318243,0.000005390325,0.00008064003,0.00026777087,0.9629758,0.0004031366,0.00012448069,0.009547602],"study_design_scores_gemma":[0.000704291,0.00017420769,0.0072574555,0.000016568605,0.00006247784,0.00006320918,0.0005218869,0.0005636333,0.97768223,0.0024936118,0.010039565,0.00042084587],"about_ca_topic_score_codex":0.00035406195,"about_ca_topic_score_gemma":0.000035636745,"teacher_disagreement_score":0.13960767,"about_ca_system_score_codex":0.00005989291,"about_ca_system_score_gemma":0.000089082954,"threshold_uncertainty_score":0.9416737},"labels":[],"label_agreement":null},{"id":"W2404084156","doi":"10.1007/978-1-4939-1062-5_5","title":"Tertiary Structure Mapping of the Pri-miRNA miR-17~92","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"microRNA; Geography; Computer science; Computational biology; Biology; Genetics; Gene","score_opus":0.012252206359869454,"score_gpt":0.3146793289756501,"score_spread":0.30242712261578064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404084156","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26362035,0.00068087486,0.7341392,0.00025385435,0.00029842128,0.00025853168,0.0000092632845,0.0000072515904,0.000732241],"genre_scores_gemma":[0.41592962,0.000022111697,0.58275,0.0009837905,0.00008881012,0.000019072277,0.00001775448,0.00002811368,0.00016072534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99701583,0.0018303385,0.00034924818,0.00042255642,0.000079546466,0.00030246045],"domain_scores_gemma":[0.99893254,0.000064833504,0.00017523943,0.0007401097,0.00004428782,0.00004298059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010458524,0.00020131524,0.00028121634,0.00007317636,0.00004827947,0.000006883196,0.00055292924,0.00039633608,0.00003744182],"category_scores_gemma":[0.0006046412,0.00014552285,0.00016426375,0.00016044843,0.0001600895,0.000001608096,0.00028751776,0.00016387358,0.0000010623147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017003642,0.000016091242,0.0024560895,0.000018387547,0.000033056884,7.132703e-7,0.000035810375,0.000026010997,0.9754677,0.0013736825,0.00003558165,0.02051992],"study_design_scores_gemma":[0.00026001656,0.00009328719,0.0019102091,0.00002234723,0.0000111036,0.000013886072,0.000018503591,0.00004441304,0.96000403,0.013597081,0.023853866,0.0001712596],"about_ca_topic_score_codex":0.000016780927,"about_ca_topic_score_gemma":0.000009922222,"teacher_disagreement_score":0.15230928,"about_ca_system_score_codex":0.000009578175,"about_ca_system_score_gemma":0.000037117687,"threshold_uncertainty_score":0.593425},"labels":[],"label_agreement":null},{"id":"W2404118168","doi":"10.1007/978-1-4939-2453-0_13","title":"A Functional Genomics Method for Assaying Gene Function in Phytopathogenic Fungi Through Host-Induced Gene Silencing Mediated by Agroinfiltration","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Agroinfiltration; Biology; Functional genomics; Gene silencing; Gene; Genomics; Genetics; Genome; Computational biology; Agrobacterium; RNA silencing; RNA interference; RNA; Transformation (genetics)","score_opus":0.04102419273987784,"score_gpt":0.3457736142405149,"score_spread":0.30474942150063705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404118168","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22485818,0.0045732986,0.7693553,0.00010745657,0.00055963633,0.00042108787,0.000057936737,0.000016444894,0.00005068512],"genre_scores_gemma":[0.14722438,0.00022205786,0.8449384,0.00090921944,0.00041588795,0.00032973025,0.0057867416,0.000060116843,0.00011346824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972114,0.0010906868,0.0004965574,0.0007016412,0.00010215945,0.00039753187],"domain_scores_gemma":[0.9991879,0.00010083123,0.00018672753,0.00029300674,0.000147861,0.00008366229],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019692238,0.00027892264,0.00034632446,0.00012206277,0.000059139933,0.000019549558,0.00015926227,0.00059956126,0.0000046946534],"category_scores_gemma":[0.0007042285,0.000271117,0.00012027594,0.0002556383,0.0000386929,0.000014255917,0.000066535475,0.00019257383,0.0000029027544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020823558,0.00007101262,0.00027200708,0.000007736373,0.000057128924,0.0000045784773,0.00012630443,0.0016157094,0.99433905,0.00012785869,0.00037207577,0.0027982884],"study_design_scores_gemma":[0.001507359,0.0005031031,0.00020333925,0.0000077514815,0.00004091758,0.00004840217,0.00008706367,0.0030657712,0.98684347,0.0009653507,0.0064011365,0.00032635411],"about_ca_topic_score_codex":0.00017486331,"about_ca_topic_score_gemma":0.00034723492,"teacher_disagreement_score":0.0776338,"about_ca_system_score_codex":0.00013583469,"about_ca_system_score_gemma":0.00024976415,"threshold_uncertainty_score":0.99997413},"labels":[],"label_agreement":null},{"id":"W2404164641","doi":"10.1007/978-1-4939-1752-5_21","title":"Computer Simulations of Phase Separation in Lipid Bilayers and Monolayers","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Monolayer; Lipid bilayer; Phase (matter); Separation (statistics); Materials science; Chemical physics; Chemistry; Nanotechnology; Computer science; Membrane; Organic chemistry; Biochemistry","score_opus":0.01749165457364451,"score_gpt":0.4038464931987737,"score_spread":0.3863548386251292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404164641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5964264,0.000048087462,0.40321514,0.000030819305,0.000101850324,0.000108640765,0.0000045836887,0.0000028227398,0.00006164061],"genre_scores_gemma":[0.7508609,0.00001568642,0.2488306,0.00015314567,0.000061185485,0.00000818425,0.000053626976,0.0000094552015,0.0000071625614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986024,0.0005866546,0.00028582168,0.00031847286,0.000034459506,0.00017217593],"domain_scores_gemma":[0.99956477,0.00005347833,0.000077109005,0.00023605592,0.00003172812,0.00003683954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045532963,0.00012729812,0.00022804648,0.0001476398,0.000015781807,0.0000048584675,0.00009915992,0.00021393632,0.000006426438],"category_scores_gemma":[0.00011709249,0.00011921174,0.000046201505,0.00013897543,0.00009681778,0.0000028823506,0.000069162976,0.000094023635,2.9431533e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044223372,0.00005447175,0.005339338,0.000010057797,0.00000992504,7.701338e-7,0.000046690675,0.0010020703,0.96501017,0.00029196686,0.0000037999569,0.028186545],"study_design_scores_gemma":[0.0016062376,0.00045702723,0.0014525795,0.000007472192,0.000014222897,0.000005550237,0.000010785618,0.006285489,0.98695683,0.000369604,0.0026823485,0.0001518245],"about_ca_topic_score_codex":0.00002620286,"about_ca_topic_score_gemma":0.000034916724,"teacher_disagreement_score":0.15443452,"about_ca_system_score_codex":0.000007261261,"about_ca_system_score_gemma":0.00002201687,"threshold_uncertainty_score":0.48613137},"labels":[],"label_agreement":null},{"id":"W2404203076","doi":"10.1007/978-1-60761-454-8_12","title":"Metabolomics in Glycomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Marine Biosciences","funders":"","keywords":"Glycomics; Metabolomics; Chemistry; Biochemistry; Hydrophilic interaction chromatography; Metabolome; Nucleotide sugar; Mass spectrometry; Biosynthesis; Glycan; Chromatography; Gene; High-performance liquid chromatography; Glycoprotein","score_opus":0.017429989412996883,"score_gpt":0.3644615680642674,"score_spread":0.3470315786512705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404203076","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.742041,0.006101342,0.24890228,0.00038260105,0.00024154093,0.0002271219,0.000007909438,0.000004409501,0.0020918057],"genre_scores_gemma":[0.41288248,0.0007386812,0.5848476,0.0013682231,0.000059031878,0.000019722554,0.000021159904,0.00001651259,0.000046536923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826616,0.00048576525,0.00034747386,0.00047522748,0.000036375848,0.0003889844],"domain_scores_gemma":[0.9994327,0.00003215934,0.00006748454,0.00039102274,0.00002999811,0.000046658464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081485097,0.00020185509,0.00032494866,0.00014135185,0.000024179717,0.000008133937,0.00028256275,0.00026838583,0.00000417343],"category_scores_gemma":[0.0002418636,0.0002023,0.0000991318,0.00019842491,0.000084632156,4.43598e-7,0.00012533275,0.0001570679,0.0000021332983],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004948541,0.000056441873,0.006228955,0.0000020113473,0.000018929362,0.000008440818,0.000035081033,0.00023416424,0.9656978,0.0039502876,0.000016878925,0.023701517],"study_design_scores_gemma":[0.0015197989,0.0006054971,0.02545136,0.000007717354,0.000018071943,0.00002535145,0.00006894928,0.00023507143,0.8901468,0.046346378,0.035025563,0.000549473],"about_ca_topic_score_codex":0.000022385648,"about_ca_topic_score_gemma":0.000040327563,"teacher_disagreement_score":0.33594537,"about_ca_system_score_codex":0.000019587087,"about_ca_system_score_gemma":0.000042115716,"threshold_uncertainty_score":0.82495546},"labels":[],"label_agreement":null},{"id":"W2404268971","doi":"10.1007/978-1-0716-3175-1","title":"Hemostasis and Thrombosis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hemostasis and retained surgical items","field":"Medicine","cited_by":54,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Mansoura University; NSW Health Pathology; University of Melbourne; Université de Namur; University of Cambridge; Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico; ARUP Laboratories; Univerza v Mariboru; Murdoch Children's Research Institute; Università degli Studi di Cagliari; NSW Ministry of Health; Children’s Hospital of Wisconsin Research Institute; Queen's University; Cambridge University Hospitals; Cedars-Sinai Medical Center; Middlesex University","keywords":"Hemostasis; Thrombosis; Medicine; Internal medicine","score_opus":0.06913414128478457,"score_gpt":0.4721016551140308,"score_spread":0.4029675138292462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404268971","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6968889,0.0022493175,0.28188208,0.00962113,0.00028688676,0.00047572915,0.000010422894,0.00019578305,0.00838973],"genre_scores_gemma":[0.088232346,0.0013180346,0.9069191,0.0028703592,0.00005364418,0.00004651847,0.00005645298,0.000040439973,0.00046308868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872535,0.00045670004,0.00020581418,0.0002811736,0.000052991734,0.0002779437],"domain_scores_gemma":[0.9994015,0.0002550661,0.000024499026,0.00019929686,0.000024178495,0.00009547247],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011309853,0.00010529753,0.00035690953,0.00018414146,0.000026184995,0.0000054492207,0.00004752788,0.00018249234,0.00006475519],"category_scores_gemma":[0.0005195522,0.00007778013,0.000070129274,0.0005691149,0.0001328884,0.0000083390005,0.00008700952,0.00017252985,0.000018862807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021857903,0.00003800571,0.023098122,0.00003802633,0.000056698565,0.00017094471,0.00009539098,0.0000018666032,0.723975,0.0043746396,0.00016700343,0.24796246],"study_design_scores_gemma":[0.004337294,0.0010000203,0.074179456,0.0001565431,0.00017017826,0.0002509854,0.0006338704,0.0039026325,0.58009344,0.035799116,0.29868537,0.0007910862],"about_ca_topic_score_codex":0.000021045998,"about_ca_topic_score_gemma":0.0000010477703,"teacher_disagreement_score":0.625037,"about_ca_system_score_codex":0.000015534235,"about_ca_system_score_gemma":0.00001949439,"threshold_uncertainty_score":0.31717816},"labels":[],"label_agreement":null},{"id":"W2404278349","doi":"10.1007/978-1-61779-867-2_18","title":"Regulation and Control of AP-1 Binding Activity in Embryotoxicity","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Pharmacology; Chemistry; Medicine","score_opus":0.016987618619677815,"score_gpt":0.3538568365714203,"score_spread":0.3368692179517425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404278349","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55654,0.00035467613,0.44275084,0.000016997015,0.00007095901,0.00013928367,0.000003849529,0.000003524674,0.000119863995],"genre_scores_gemma":[0.7998456,0.000020704174,0.19999234,0.000055266744,0.000023780156,0.00002303165,0.0000091692555,0.000011975953,0.000018176057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979709,0.0011777579,0.00023044384,0.00027834575,0.00004576277,0.000296839],"domain_scores_gemma":[0.9994927,0.00006508289,0.00011236587,0.00025634604,0.000022382115,0.00005109266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018381485,0.00013151916,0.00026337616,0.0001433028,0.000014458561,0.0000028516092,0.000100380756,0.0002994325,0.000006880823],"category_scores_gemma":[0.00043399748,0.00013314612,0.00005347219,0.00014117919,0.00009650344,0.0000048651395,0.000106079635,0.000113728755,5.882998e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007459676,0.00006357553,0.037094742,0.000014653216,0.000016493239,9.1373727e-7,0.00003002954,0.000014973041,0.9538282,0.0010935382,8.9081055e-7,0.007767388],"study_design_scores_gemma":[0.00068338204,0.00013362934,0.020117683,0.000008521213,0.000008231945,0.000007641704,0.0000151068025,0.00029846816,0.97733635,0.0010968088,0.00016715485,0.00012700749],"about_ca_topic_score_codex":0.00002936205,"about_ca_topic_score_gemma":0.000011954235,"teacher_disagreement_score":0.24330555,"about_ca_system_score_codex":0.000020369178,"about_ca_system_score_gemma":0.000019955567,"threshold_uncertainty_score":0.54295415},"labels":[],"label_agreement":null},{"id":"W2404396068","doi":"10.1007/978-1-4939-0659-8_12","title":"In Vitro Maturation of Immature Human Oocytes for Clinical Application","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University","funders":"","keywords":"Oocyte; Germinal vesicle; Andrology; Infertility; Meiosis; In vitro maturation; Biology; Pregnancy; Medicine; Embryo; Cell biology; Genetics","score_opus":0.050156265320099175,"score_gpt":0.507095146109585,"score_spread":0.45693888078948575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404396068","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23916827,0.00032029065,0.7589469,0.0006952454,0.00012847238,0.0005139413,0.0000026880625,0.000008189032,0.00021600949],"genre_scores_gemma":[0.46693596,0.000008753426,0.53228503,0.00048634576,0.000087098895,0.000085456486,0.00008364466,0.0000060072457,0.00002170939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790347,0.0011478168,0.00045251558,0.00035058847,0.000022728207,0.00012289708],"domain_scores_gemma":[0.99911344,0.00031610977,0.00012367198,0.00033632855,0.0000897429,0.000020730953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035227954,0.00007862987,0.0003823378,0.00009077397,0.000013123099,8.3834857e-7,0.00007146525,0.00035190705,0.000004386776],"category_scores_gemma":[0.002411603,0.00006352253,0.00008454913,0.000111872825,0.00017672453,0.000012135749,0.000024016406,0.00020490638,9.550142e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003797531,0.00010526557,0.0075148316,0.00003689462,0.00001315534,3.9836956e-7,0.000020893092,4.8875586e-7,0.9629547,0.002788051,0.00001390286,0.022753863],"study_design_scores_gemma":[0.00090519333,0.00031563357,0.20090692,0.000006771198,0.000017088083,0.000003593323,0.0000067521323,0.00030476012,0.7606524,0.033475544,0.0033464322,0.00005888052],"about_ca_topic_score_codex":0.000011386863,"about_ca_topic_score_gemma":0.0000020242915,"teacher_disagreement_score":0.22776769,"about_ca_system_score_codex":0.000018028353,"about_ca_system_score_gemma":0.000015816531,"threshold_uncertainty_score":0.28870884},"labels":[],"label_agreement":null},{"id":"W2404416679","doi":"10.1007/978-1-59745-257-1_3","title":"Rhythmic Conidiation in Neurospora crassa","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant and Biological Electrophysiology Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds de Recherche du Québec - Santé","keywords":"Conidiation; Neurospora crassa; Conidium; Mycelium; Biology; Neurospora; Spore; Fungus; Crassa; Botany; Microbiology; Genetics; Virulence; Gene","score_opus":0.023652902975720813,"score_gpt":0.3467920677014872,"score_spread":0.32313916472576637,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404416679","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.990837,0.0004050058,0.0072358474,0.00055530376,0.00014161646,0.00017657624,0.000005963632,0.000034429486,0.0006082927],"genre_scores_gemma":[0.96418154,0.00015292579,0.034297887,0.0011850863,0.00007849174,0.000017084543,0.000057643243,9.296134e-7,0.000028406032],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99811697,0.00065810623,0.00032024126,0.00037801408,0.00004223002,0.00048446158],"domain_scores_gemma":[0.999095,0.00071968365,0.00007852278,0.000046765814,0.000021856476,0.00003814618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014504768,0.00014969386,0.00030003398,0.000043183445,0.000046961683,0.000005741117,0.00017701907,0.000264448,0.00003556844],"category_scores_gemma":[0.00037393274,0.000059023205,0.00006508428,0.0005114929,0.0001259284,0.000019611494,0.00008215028,0.00025811073,0.00000821537],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056120043,0.00003836233,0.047500797,9.32261e-7,0.0000036537406,0.00005396043,0.0000074290306,0.0000024912688,0.8874462,0.0013188729,0.000005382938,0.06356575],"study_design_scores_gemma":[0.00027853646,0.0005852523,0.8176202,0.0000067007177,0.000003916207,0.000016837132,0.000052069197,0.00005205723,0.15470606,0.020550916,0.0058540897,0.00027336646],"about_ca_topic_score_codex":0.00013749448,"about_ca_topic_score_gemma":0.0008800865,"teacher_disagreement_score":0.7701194,"about_ca_system_score_codex":0.000030615865,"about_ca_system_score_gemma":0.000004377998,"threshold_uncertainty_score":0.24068965},"labels":[],"label_agreement":null},{"id":"W2404498908","doi":"10.1007/978-1-60327-009-0_15","title":"Assessment of Embryotoxicity Using Mouse Embryo Culture","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Embryo; Andrology; Embryo culture; Biology; Medicine; Genetics; Embryogenesis","score_opus":0.02980824657318696,"score_gpt":0.43958094171997375,"score_spread":0.40977269514678677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404498908","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.409287,0.00057006406,0.5882487,0.00003868276,0.00005666251,0.00022899277,0.000014125639,0.00000761114,0.0015481072],"genre_scores_gemma":[0.29951027,0.000115264644,0.6997526,0.00027724518,0.000040000847,0.000009514462,0.000059534217,0.000017770957,0.00021779908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99707586,0.001377626,0.00041769672,0.0005460109,0.00013902663,0.00044375678],"domain_scores_gemma":[0.9990586,0.000025176494,0.00014133974,0.00057402643,0.000113051916,0.000087781904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013108107,0.00021951532,0.0003762756,0.00016365873,0.000039715043,0.000009435361,0.00041903407,0.00040921065,0.000018321298],"category_scores_gemma":[0.00027319914,0.00020255079,0.00016002134,0.00027152293,0.00014869682,0.0000027038855,0.00019169698,0.00027027557,0.00000118524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029647914,0.00013861843,0.0020930667,0.000017163038,0.000034763656,0.000011933601,0.000011606664,0.0005358237,0.99408054,0.00071190676,0.00002343932,0.0023114756],"study_design_scores_gemma":[0.0005278701,0.0004982283,0.0022718855,0.000011647471,0.0000112104635,0.000017825801,0.0000224078,0.0014992282,0.9929225,0.0010167517,0.000986641,0.0002138233],"about_ca_topic_score_codex":0.00002269086,"about_ca_topic_score_gemma":0.000004263522,"teacher_disagreement_score":0.11150386,"about_ca_system_score_codex":0.00004589119,"about_ca_system_score_gemma":0.00012218878,"threshold_uncertainty_score":0.82597816},"labels":[],"label_agreement":null},{"id":"W2404566104","doi":"10.1007/978-1-4939-3584-0_10","title":"Methods and Strategies for Lineage Tracing of Mesenchymal Progenitor Cells","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mesenchymal stem cell; Biology; Cell biology; Progenitor cell; Clonogenic assay; Bone marrow; Stem cell transplantation for articular cartilage repair; In vivo; Cartilage; Stem cell; Immunology; In vitro; Genetics; Endothelial stem cell; Adult stem cell; Anatomy","score_opus":0.06750306335862509,"score_gpt":0.5085704859823988,"score_spread":0.44106742262377374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404566104","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0823681,0.00121181,0.914247,0.0002550982,0.00013445778,0.0008546314,0.000010190127,0.000017700891,0.0009010465],"genre_scores_gemma":[0.041080236,0.000072794785,0.95828766,0.000049877202,0.000062280895,0.00012057412,0.0000027352216,0.000027773493,0.00029608255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99663,0.0018660679,0.0004947622,0.00045643063,0.00010880508,0.00044390664],"domain_scores_gemma":[0.99733055,0.0019357232,0.000114154296,0.0003386027,0.00015153523,0.00012943357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004757796,0.00018097047,0.0006171626,0.00026287473,0.000026559715,0.000008299317,0.00014236674,0.00027725284,0.000054340537],"category_scores_gemma":[0.0016469389,0.0001162037,0.00012677744,0.00022512596,0.00032935714,0.000035344638,0.00010793609,0.00017033963,0.0000012611719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017331919,0.00004731293,0.0010559713,0.0002192373,0.00005007755,0.000017957009,0.000093788236,9.2531656e-7,0.87193567,0.003296051,0.000006119043,0.123103596],"study_design_scores_gemma":[0.0013269226,0.0007827409,0.00024270538,0.000083890096,0.000039840917,0.000029968793,0.0001609126,0.0003115661,0.9891501,0.0057113757,0.0020327165,0.0001272799],"about_ca_topic_score_codex":0.000028133047,"about_ca_topic_score_gemma":0.0000033688248,"teacher_disagreement_score":0.12297631,"about_ca_system_score_codex":0.00003748755,"about_ca_system_score_gemma":0.00017352522,"threshold_uncertainty_score":0.47386494},"labels":[],"label_agreement":null},{"id":"W2404663361","doi":"10.1007/978-1-4939-0473-0_58","title":"Assessing Pseudomonas aeruginosa Virulence and the Host Response Using Murine Models of Acute and Chronic Lung Infection","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Pseudomonas aeruginosa; In vivo; Virulence; Microbiology; Chronic infection; Cystic fibrosis; Infectivity; Lung; Pneumonia; Biology; Immune system; Bacteria; Immunology; Medicine; Gene; Virus; Internal medicine","score_opus":0.017471505430435522,"score_gpt":0.3604831805942656,"score_spread":0.3430116751638301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404663361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6053021,0.00076688227,0.39362106,0.00008095808,0.00008443247,0.000109172724,0.0000023612408,0.0000041414964,0.000028901297],"genre_scores_gemma":[0.79865795,0.00037636346,0.2007564,0.00012525544,0.000052310512,0.0000048328875,0.000007597761,0.000014787214,0.000004501924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99688005,0.002184435,0.00028394724,0.00037493164,0.000042363255,0.00023428375],"domain_scores_gemma":[0.99931973,0.00015070647,0.00015434618,0.00028889143,0.0000472222,0.000039113173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002328638,0.00016969758,0.00029967964,0.000082445724,0.00008188417,0.00003158168,0.000084278094,0.00023310228,0.0000012934292],"category_scores_gemma":[0.00028083514,0.00013091639,0.0000596937,0.0001114653,0.0004948812,0.000010469092,0.00023389449,0.00013484638,6.310131e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003901639,0.000009729004,0.00059637154,0.000019951336,0.000050088966,0.0000018604167,0.000033683664,0.00010670223,0.9914383,0.0010827349,4.6974813e-7,0.006269889],"study_design_scores_gemma":[0.0012958096,0.0001823989,0.0020779772,0.000041400093,0.00007099648,0.00009432961,0.000010807349,0.028981822,0.96613276,0.00072146597,0.00020913554,0.00018111106],"about_ca_topic_score_codex":0.00011937552,"about_ca_topic_score_gemma":0.000010924741,"teacher_disagreement_score":0.19335587,"about_ca_system_score_codex":0.000017900293,"about_ca_system_score_gemma":0.000048165915,"threshold_uncertainty_score":0.5338616},"labels":[],"label_agreement":null},{"id":"W2404681519","doi":"10.1007/978-1-62703-128-8_16","title":"Long-Term Culture-Initiating Cell Assay for Mouse Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies; BC Cancer Agency","funders":"","keywords":"Haematopoiesis; Stromal cell; Cell biology; Cell culture; In vitro; Progenitor cell; Stem cell; Biology; Cell; Molecular biology; Immunology; Cancer research; Genetics","score_opus":0.04027615698122884,"score_gpt":0.413414397828301,"score_spread":0.37313824084707214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404681519","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.056470454,0.0006753271,0.93837,0.000048715887,0.00033476562,0.00065339444,0.000012170008,0.000040016654,0.0033951423],"genre_scores_gemma":[0.09643485,0.00004420575,0.9023851,0.00048713852,0.00010293722,0.00010645279,0.00010336078,0.00003661054,0.00029935563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801,0.00080893846,0.00036705713,0.0002670685,0.00007359442,0.0004733513],"domain_scores_gemma":[0.99898404,0.00048221374,0.00009927045,0.0002571816,0.000054537926,0.00012275463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019312507,0.0001763829,0.00037550606,0.00012130893,0.000037311984,0.0000060210596,0.00009385815,0.0002926184,0.000051441675],"category_scores_gemma":[0.00023679527,0.00015288597,0.0001246488,0.00013212157,0.000052887328,0.000029212135,0.000022781236,0.00019843609,0.000018341309],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041141302,0.00012560637,0.024568815,0.00032361332,0.000026357102,0.000019238696,0.0006298411,0.0000028257662,0.97078896,0.00055063964,0.000015352643,0.0029075954],"study_design_scores_gemma":[0.0013138722,0.00015699347,0.0008912775,0.000044587945,0.000095459836,0.00005560735,0.000065969056,0.00008457772,0.9963371,0.0001684765,0.00062282756,0.00016325465],"about_ca_topic_score_codex":0.000005592799,"about_ca_topic_score_gemma":0.0000013775709,"teacher_disagreement_score":0.039964393,"about_ca_system_score_codex":0.00005024477,"about_ca_system_score_gemma":0.000027104697,"threshold_uncertainty_score":0.6234509},"labels":[],"label_agreement":null},{"id":"W2404724518","doi":"10.1007/978-1-61779-160-4_23","title":"Study of G Protein-Coupled Receptor/β-arrestin Interactions Within Endosomes Using FRAP","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Endosome; Arrestin; Fluorescence recovery after photobleaching; Cell biology; Yellow fluorescent protein; Chemistry; Scaffold protein; Receptor; G protein; HEK 293 cells; Intracellular; Biology; Signal transduction; Biochemistry","score_opus":0.06786797856907373,"score_gpt":0.3944787752244923,"score_spread":0.3266107966554186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404724518","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64604664,0.0002305825,0.35285583,0.000003197151,0.00029494273,0.00040478676,0.0000026947362,0.0000086356995,0.00015269007],"genre_scores_gemma":[0.52947795,0.0000064162223,0.47033462,0.00002437615,0.000033932316,0.000059182534,0.000010469039,0.000023364404,0.0000296802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731296,0.0012115188,0.00059003866,0.0005173885,0.000079533405,0.00028854643],"domain_scores_gemma":[0.9990707,0.000032368687,0.00028079608,0.00045601997,0.0000980166,0.00006209697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001093924,0.0002283965,0.00038391884,0.00019085767,0.000052746313,0.0000069195953,0.0003002679,0.00021327798,0.00016968403],"category_scores_gemma":[0.00040003558,0.00021386825,0.000113172086,0.00023809493,0.00009270784,0.0000044184453,0.00018801553,0.0002174036,0.0000018091811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115158095,0.00033209266,0.0038474288,0.000009304749,0.00009225738,0.000008541954,0.00064931734,0.00007510699,0.9923778,0.00052864844,0.0000011603835,0.001963158],"study_design_scores_gemma":[0.0006851681,0.00093307835,0.00011765646,0.000028932578,0.000024448536,0.000011566865,0.0010762793,0.0003507919,0.99521947,0.0011819056,0.00014561489,0.00022506411],"about_ca_topic_score_codex":0.00032317635,"about_ca_topic_score_gemma":0.000052092102,"teacher_disagreement_score":0.11747879,"about_ca_system_score_codex":0.000018587642,"about_ca_system_score_gemma":0.00006516708,"threshold_uncertainty_score":0.8721294},"labels":[],"label_agreement":null},{"id":"W2404753645","doi":"10.1007/978-1-59745-513-8_16","title":"Small-Angle Neutron Scattering to Detect Rafts and Lipid Domains","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nuclear Laboratories","funders":"National Center for Research Resources","keywords":"Membrane; Nanometre; Vesicle; Small-angle neutron scattering; Materials science; Neutron scattering; Small-angle scattering; Scattering; Lipid raft; Microscopy; Förster resonance energy transfer; Small-angle X-ray scattering; Nanotechnology; Chemical physics; Chemistry; Fluorescence; Optics; Physics","score_opus":0.018209237683270825,"score_gpt":0.35026935271759757,"score_spread":0.33206011503432675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404753645","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5959252,0.0002034373,0.40307862,0.00008657421,0.0002573376,0.00018974398,0.0000033138047,0.000011558302,0.00024420407],"genre_scores_gemma":[0.35682538,0.000036171103,0.64134175,0.001341031,0.00026915292,0.000029539386,0.000036576996,0.0000371797,0.00008321021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981964,0.00033102353,0.00030006547,0.0006025706,0.000049213133,0.0005206746],"domain_scores_gemma":[0.99929214,0.00004588254,0.00005710662,0.0004165058,0.000034555975,0.0001538409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001149022,0.00023533247,0.00027408462,0.00017144093,0.000050569528,0.000015068832,0.00022805473,0.00031930103,0.00001027772],"category_scores_gemma":[0.00018076006,0.00022010648,0.00008353288,0.00018514335,0.00011330819,0.0000019365907,0.0002801943,0.00016770903,0.000003003274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008357762,0.0000129029795,0.0031885456,0.000011255947,0.000017446218,0.000019208706,0.00003646843,0.000008287432,0.94447243,0.00008542075,0.0000062128447,0.05205826],"study_design_scores_gemma":[0.0004948672,0.00035873748,0.008294216,0.000008469975,0.000019675672,0.00006264387,0.000024405068,0.0000022893055,0.96953106,0.00016203911,0.020775927,0.00026568593],"about_ca_topic_score_codex":0.000037450867,"about_ca_topic_score_gemma":0.00014299594,"teacher_disagreement_score":0.23909983,"about_ca_system_score_codex":0.000019447289,"about_ca_system_score_gemma":0.000025821628,"threshold_uncertainty_score":0.89756817},"labels":[],"label_agreement":null},{"id":"W2404779005","doi":"10.1007/978-1-59745-170-3_29","title":"Isolation of Drug-Resistant Mutant HIV Variants Using Tissue Culture Drug Selection","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV/AIDS drug development and treatment","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Drug; Drug resistance; Selection (genetic algorithm); Mutant; Human immunodeficiency virus (HIV); Isolation (microbiology); Virus; Biology; Computational biology; Virology; Pharmacology; Bioinformatics; Genetics; Gene; Computer science","score_opus":0.016673012328269354,"score_gpt":0.3783515313429898,"score_spread":0.3616785190147205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404779005","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16327594,0.00060034194,0.83368176,0.0008893412,0.00011046638,0.0004164806,0.0000045325964,0.000033649772,0.0009874749],"genre_scores_gemma":[0.16878255,0.000029640014,0.82983965,0.00013509642,0.000030348789,0.0000069242924,0.000044951194,0.0000121463045,0.001118681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983285,0.00061452313,0.00039593386,0.0003187108,0.00009716135,0.0002451701],"domain_scores_gemma":[0.9995007,0.00004773262,0.00013527901,0.00017443151,0.00008510595,0.000056772962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006774534,0.00017911938,0.0004177968,0.0002390102,0.000042665386,0.000004982247,0.0000637489,0.0001511869,0.00004789907],"category_scores_gemma":[0.0001503514,0.0001455413,0.00006706833,0.00045227207,0.000042452917,0.000027628923,0.0000205307,0.00016205342,0.0000041250364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017164959,0.00015973805,0.002942594,0.00001879547,0.00006337337,0.00005234681,0.0007971052,0.000037607468,0.9873808,0.0010743041,0.00005360438,0.0072480976],"study_design_scores_gemma":[0.0015630068,0.00018793227,0.0029340843,0.00010239762,0.00014553266,0.00006439513,0.00013434491,0.002715258,0.9858259,0.0039542043,0.002180443,0.0001924938],"about_ca_topic_score_codex":0.000029092053,"about_ca_topic_score_gemma":0.000009111522,"teacher_disagreement_score":0.0070556034,"about_ca_system_score_codex":0.00014142336,"about_ca_system_score_gemma":0.00008846968,"threshold_uncertainty_score":0.5935002},"labels":[],"label_agreement":null},{"id":"W2404859095","doi":"10.1007/978-1-4939-3664-9_8","title":"Preparation of Gap Junctions in Membrane Microdomains for Immunoprecipitation and Mass Spectrometry Interactome Analysis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connexins and lens biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Interactome; Immunoprecipitation; Membrane protein; Integral membrane protein; Cell fractionation; Gap junction; Cell biology; Chemistry; Crosstalk; Biology; Peripheral membrane protein; Membrane; Computational biology; Intracellular; Biochemistry; Physics; Gene","score_opus":0.01652223127373312,"score_gpt":0.3967050843084582,"score_spread":0.38018285303472504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404859095","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43695855,0.0004439651,0.56213325,0.00010080146,0.000058085297,0.000164362,0.000020498972,0.0000026734444,0.000117833595],"genre_scores_gemma":[0.6663805,0.00021045288,0.33309844,0.0000535414,0.000021592043,0.000060519455,0.00008782454,0.00000949616,0.00007759145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983357,0.0006081064,0.00039306,0.0004234004,0.000026191123,0.00021349489],"domain_scores_gemma":[0.9992926,0.00019021399,0.00013627364,0.0002872938,0.000067200024,0.00002640625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091070763,0.00013520029,0.00033070453,0.00050821586,0.000017850512,0.0000042582355,0.00011321574,0.00024289433,0.000019552306],"category_scores_gemma":[0.00051572936,0.00010734333,0.00013130241,0.00038073005,0.00013232493,0.0000041026283,0.000059364105,0.000057874273,3.900981e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003205072,0.000041325384,0.009836955,0.0000107833785,0.00017823881,6.3737605e-7,0.000036150534,0.000017760141,0.98314506,0.0013686126,0.0000034810678,0.0050405124],"study_design_scores_gemma":[0.0011269153,0.00076791947,0.0071402653,0.000011225992,0.000082685685,0.0000050229964,0.00008601423,0.00017320379,0.98578346,0.0027367037,0.0019146249,0.00017197612],"about_ca_topic_score_codex":0.000034863813,"about_ca_topic_score_gemma":0.00018762825,"teacher_disagreement_score":0.22942199,"about_ca_system_score_codex":0.000026035459,"about_ca_system_score_gemma":0.000027573104,"threshold_uncertainty_score":0.43773338},"labels":[],"label_agreement":null},{"id":"W2404921755","doi":"10.1007/978-1-61779-361-5_16","title":"Protein Complex Prediction with RNSC","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research","keywords":"Biological network; Computer science; Computational biology; Partition (number theory); Cluster analysis; Protein function prediction; Cluster (spacecraft); Graph; Data mining; Topology (electrical circuits); Theoretical computer science; Biology; Gene; Mathematics; Artificial intelligence; Protein function; Combinatorics; Genetics; Computer network","score_opus":0.03092808582183118,"score_gpt":0.32343925838037463,"score_spread":0.2925111725585434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2404921755","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051077645,0.00021201679,0.9393796,0.0000342975,0.00008166467,0.00034742238,0.000011112328,0.000015925825,0.008840363],"genre_scores_gemma":[0.17015938,0.000014374796,0.829107,0.00033225288,0.000053786745,0.00007843119,0.00010605901,0.00002257815,0.00012613392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998725,0.00032254503,0.0002800482,0.00031733754,0.000044308734,0.00031074742],"domain_scores_gemma":[0.9993973,0.0000072888424,0.000095358446,0.00039441083,0.000043782264,0.000061889084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005994898,0.00017377274,0.00019003272,0.00007206929,0.000036958245,0.000007943946,0.0002183195,0.00026153892,0.000049034883],"category_scores_gemma":[0.00003878585,0.00014362085,0.00005677143,0.00012538553,0.00015975517,0.000002497413,0.00011551737,0.00015174865,0.000005154466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013467361,0.00005212232,0.0019721554,0.000012040852,0.00005141221,0.0000064686305,0.00008601881,0.000025874595,0.97825146,0.004666104,0.00007695262,0.014664742],"study_design_scores_gemma":[0.0022324736,0.0026583525,0.0056803417,0.000043790762,0.00004172613,0.0001137724,0.00015645377,0.0019862612,0.9212121,0.027374635,0.03773897,0.00076114334],"about_ca_topic_score_codex":0.000031446732,"about_ca_topic_score_gemma":0.000024647205,"teacher_disagreement_score":0.119081736,"about_ca_system_score_codex":0.000012329114,"about_ca_system_score_gemma":0.000040128463,"threshold_uncertainty_score":0.58566886},"labels":[],"label_agreement":null},{"id":"W2405046015","doi":"10.1007/978-1-4939-0363-4_15","title":"Intranasal Delivery of Chitosan–siRNA Nanoparticle Formulation to the Brain","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Drug Delivery Systems","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Chitosan; Nasal administration; Nanoparticle; Chemistry; Nanotechnology; Pharmacology; Medicine; Materials science; Biochemistry","score_opus":0.07539567600664455,"score_gpt":0.4982651834658768,"score_spread":0.42286950745923224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405046015","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4127878,0.00023773985,0.5833876,0.0019165766,0.0006403716,0.0003581596,0.000007346595,0.000023247016,0.0006411645],"genre_scores_gemma":[0.85957235,0.000013430658,0.13624537,0.0039786855,0.00009226121,0.000054630018,0.00000724864,0.00001733042,0.000018711595],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9940565,0.004676091,0.00049383234,0.0003116724,0.00007259385,0.00038931557],"domain_scores_gemma":[0.9979754,0.0014095167,0.00014516797,0.00033529397,0.000038982034,0.00009564705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024535481,0.00016474398,0.00032108012,0.00014284273,0.000079427744,0.000004305027,0.0003603827,0.00026774904,0.00004849423],"category_scores_gemma":[0.00080612703,0.0001301833,0.0000819318,0.0003815037,0.00013696669,0.00003716392,0.00012659436,0.000376036,0.00001621448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013407285,0.00004925649,0.003389965,0.000011636606,0.000036409347,0.0000029674518,0.00039882478,0.01019639,0.88904047,0.009885924,0.00006557007,0.08678852],"study_design_scores_gemma":[0.0007692068,0.00021831233,0.0007391402,0.000007985523,0.00002493848,0.000009037247,0.0000581897,0.019966435,0.9275555,0.0031817502,0.04731271,0.00015677903],"about_ca_topic_score_codex":0.000038505783,"about_ca_topic_score_gemma":0.000028931776,"teacher_disagreement_score":0.4471422,"about_ca_system_score_codex":0.00002285696,"about_ca_system_score_gemma":0.000027506356,"threshold_uncertainty_score":0.5308721},"labels":[],"label_agreement":null},{"id":"W2405077483","doi":"10.1007/978-1-61779-968-6_7","title":"Semiautomated Panning of Naive Camelidae Libraries and Selection of Single-Domain Antibodies Against Peptide Antigens","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Guelph; National Research Council Canada; Institute for Biological Sciences","funders":"Genomic Health","keywords":"Panning (audio); Antigen; Phage display; Computational biology; Antibody; Biology; Peptide library; Single-domain antibody; Epitope; Recombinant DNA; Molecular biology; Genetics; Peptide sequence; Gene","score_opus":0.038196250916816034,"score_gpt":0.39806331808063566,"score_spread":0.3598670671638196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405077483","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9486633,0.0040800576,0.04535353,0.00014149246,0.000058905604,0.00019242796,0.000011608055,0.000021867076,0.001476824],"genre_scores_gemma":[0.5368338,0.00022586988,0.4627112,0.00009478902,0.000032416414,0.0000047905,0.000020161664,0.000013405229,0.00006355179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815243,0.000763587,0.00039566297,0.00020259623,0.00011028875,0.00037544157],"domain_scores_gemma":[0.9992276,0.0003287673,0.00013935886,0.0001129827,0.00010109246,0.00009022192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091372785,0.00015449044,0.00054408365,0.00029968898,0.00003920233,0.0000041379367,0.000070703696,0.00017942248,0.000022974484],"category_scores_gemma":[0.00046211368,0.00012631612,0.0000826205,0.0003351034,0.0005880121,0.000051496998,0.00012813,0.00020594934,8.34377e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012548389,0.00008192012,0.3008774,0.00015499182,0.000078587356,0.000009156382,0.0006457579,0.0000021659716,0.6906579,0.0013761298,0.0000120714885,0.0059784134],"study_design_scores_gemma":[0.00044003763,0.0003690446,0.08951424,0.00013802516,0.000026873393,0.000063592845,0.00042888508,0.00023519025,0.9065898,0.0009786004,0.0010925339,0.00012318943],"about_ca_topic_score_codex":0.00010652948,"about_ca_topic_score_gemma":0.0000031946201,"teacher_disagreement_score":0.41735765,"about_ca_system_score_codex":0.000019927218,"about_ca_system_score_gemma":0.000053487714,"threshold_uncertainty_score":0.5151022},"labels":[],"label_agreement":null},{"id":"W2405105657","doi":"10.1007/978-1-62703-308-4_18","title":"Using Plethysmography to Determine Erythropoietin’s Impact on Neural Control of Ventilation","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience of respiration and sleep","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôpital Saint-François d'Assise; Centre hospitalier universitaire de Québec","funders":"","keywords":"Plethysmograph; Ventilation (architecture); Tidal volume; Respiration; Control of respiration; Respiratory system; Erythropoietin; Respiratory minute volume; Respiratory rate; Medicine; Anesthesia; Internal medicine; Blood pressure; Engineering; Anatomy; Heart rate","score_opus":0.06731537425107308,"score_gpt":0.4346978141477132,"score_spread":0.3673824398966401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405105657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5700345,0.000008888009,0.4292792,0.00013513242,0.00017609242,0.00027226587,0.0000033444353,0.000011390399,0.000079184065],"genre_scores_gemma":[0.87945825,0.0000013372052,0.11809122,0.0023994357,0.000012406078,0.000020719,4.6807088e-7,0.00001090679,0.0000052748064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99755895,0.0013309128,0.00030677966,0.00039503525,0.00011905971,0.00028923413],"domain_scores_gemma":[0.9991536,0.0003282988,0.00012758074,0.0002698965,0.00003832682,0.00008225575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047098924,0.00014239132,0.00025059754,0.0004259391,0.000045392917,0.00002312495,0.00024164568,0.000077870856,0.000074801086],"category_scores_gemma":[0.0012030454,0.00011401068,0.00013186483,0.00061436335,0.0001798501,0.00006445731,0.000046272286,0.00013235102,0.000008098048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040185612,0.00004104448,0.0027596962,0.0000023388657,0.0000012743556,0.000005961075,0.000024700485,0.0026510372,0.97761863,0.00041376564,0.0000025624781,0.016438778],"study_design_scores_gemma":[0.00037613238,0.00059714454,0.0049386458,0.000006542449,0.0000038451203,0.000008996076,0.0000050229423,0.031979874,0.9608281,0.0010468039,0.00009302492,0.00011582838],"about_ca_topic_score_codex":0.000048714654,"about_ca_topic_score_gemma":9.675038e-7,"teacher_disagreement_score":0.311188,"about_ca_system_score_codex":0.000022475535,"about_ca_system_score_gemma":0.000017343047,"threshold_uncertainty_score":0.46492207},"labels":[],"label_agreement":null},{"id":"W2405155857","doi":"10.1007/978-1-4939-3299-3_7","title":"Methods for Assessing the In Vivo Role of PTEN in Glucose Homeostasis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"PTEN; Glucose homeostasis; Type 2 diabetes; PI3K/AKT/mTOR pathway; Homeostasis; Pathogenesis; Diabetes mellitus; Insulin resistance; Regulator; Protein kinase B; Biology; Knockout mouse; Medicine; Endocrinology; Cell biology; Internal medicine; Signal transduction; Immunology; Receptor; Gene; Biochemistry","score_opus":0.043218390022474684,"score_gpt":0.4622500268913187,"score_spread":0.41903163686884404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405155857","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2004221,0.017853377,0.78030294,0.00016315574,0.0002754458,0.00044741677,0.000015846515,0.0000069808216,0.00051274954],"genre_scores_gemma":[0.1215318,0.00014153353,0.87763005,0.00033152287,0.00006451683,0.00021921512,0.000023209088,0.000039950595,0.000018205646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951605,0.0031552578,0.0005862642,0.0005543176,0.00007812052,0.00046550835],"domain_scores_gemma":[0.9986204,0.0004124764,0.00019932164,0.0005857225,0.00011765648,0.00006445283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0065736338,0.00023243227,0.00047546162,0.00023538369,0.000022023665,0.000014737569,0.0005309784,0.00042623075,0.0000078098465],"category_scores_gemma":[0.0025187775,0.00019452363,0.00013778053,0.00044934917,0.00022105785,0.000005489885,0.00024276106,0.00023900054,3.7381446e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091122434,0.00006254628,0.0045919316,0.00001508973,0.00002921928,0.0000030214633,0.00015243061,0.00047514256,0.8867468,0.00036695277,0.000023510362,0.10744221],"study_design_scores_gemma":[0.0011104731,0.00021968175,0.00034060093,0.000027274413,0.000015953994,0.0000076070005,0.000354298,0.0014651171,0.9614214,0.013716634,0.021096779,0.00022420044],"about_ca_topic_score_codex":0.00019466996,"about_ca_topic_score_gemma":0.00009347128,"teacher_disagreement_score":0.107218005,"about_ca_system_score_codex":0.00008583639,"about_ca_system_score_gemma":0.00023205517,"threshold_uncertainty_score":0.79324436},"labels":[],"label_agreement":null},{"id":"W2405207210","doi":"10.1007/978-1-4939-0956-8_14","title":"Pharmacogenetics of Antipsychotic Treatment in Schizophrenia","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Schizophrenia research and treatment","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"Pharmacogenetics; Schizophrenia (object-oriented programming); Antipsychotic; Adverse effect; Medicine; Personalized medicine; Psychiatry; Psychology; Pharmacology; Bioinformatics; Genotype; Biology; Genetics","score_opus":0.08879263493889208,"score_gpt":0.5233430932940908,"score_spread":0.4345504583551987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405207210","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00039575383,0.9816187,0.015897758,0.000031012303,0.0001799028,0.0016435267,0.00002451239,0.00001408712,0.00019475381],"genre_scores_gemma":[0.000016578419,0.61685455,0.38269863,0.00001631913,0.00003676946,0.00021579266,0.000091510614,0.000039694638,0.00003017989],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99469507,0.0030277336,0.0009770059,0.00066283124,0.00012939765,0.00050794386],"domain_scores_gemma":[0.99827665,0.00055242336,0.00025100875,0.0007127186,0.00004233848,0.00016488697],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009807827,0.00050723704,0.0032001832,0.0010416887,0.000011851828,0.0000045802494,0.00023090673,0.00050598395,0.000065011416],"category_scores_gemma":[0.00029785352,0.0003563542,0.0006169705,0.0007063161,0.000172593,0.000005661175,0.00007895256,0.00044252558,0.000022544702],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00067700964,0.0004678942,0.0003173321,0.0028855961,0.00042641675,0.00034588916,0.00000922866,9.0925846e-7,0.0006153389,0.00050265953,0.0000024201522,0.9937493],"study_design_scores_gemma":[0.02398486,0.00550423,0.0004983029,0.012561463,0.003410412,0.0005955334,0.000007975708,0.00012543763,0.006577104,0.004881143,0.9407845,0.0010690496],"about_ca_topic_score_codex":0.000061005343,"about_ca_topic_score_gemma":0.000029993418,"teacher_disagreement_score":0.99268025,"about_ca_system_score_codex":0.0002822867,"about_ca_system_score_gemma":0.00062226347,"threshold_uncertainty_score":0.99988884},"labels":[],"label_agreement":null},{"id":"W2405244686","doi":"10.1007/978-1-4939-1016-8_11","title":"Eosinophil Shape Change and Secretion","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Eosinophil peroxidase; Eosinophil; CCL11; Degranulation; Chemotaxis; Secretion; Eotaxin; Immunology; Eosinophil cationic protein; Cell biology; Stimulation; Chemistry; Biology; Endocrinology; Biochemistry; Receptor; Asthma","score_opus":0.041631843818028924,"score_gpt":0.39736739185267383,"score_spread":0.3557355480346449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405244686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5480514,0.0027703268,0.4469255,0.0007974899,0.00013428617,0.0002451805,0.0000015060943,0.000033249537,0.0010410437],"genre_scores_gemma":[0.52632576,0.000100999016,0.466218,0.006934579,0.00024819063,0.00007186738,0.00002678676,0.000025214813,0.00004860849],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.9988761,0.0006140903,0.00011930217,0.0002095112,0.000034101064,0.00014689102],"domain_scores_gemma":[0.99967873,0.000066152534,0.000030043426,0.00012726791,0.000020079808,0.00007773456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004720047,0.00008573418,0.00020123897,0.0001042217,0.000019682231,0.0000029742278,0.000031862128,0.00013117254,0.000046398778],"category_scores_gemma":[0.00029204736,0.00006796707,0.000037730515,0.000091434646,0.00010839925,0.000011005648,0.000039792183,0.00009697358,0.0000044973112],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042295625,0.00004255971,0.030932734,0.00003711116,0.000008130758,0.00002330023,0.00004068833,2.1992783e-7,0.47323874,0.0012978181,0.000005674785,0.49433073],"study_design_scores_gemma":[0.005582935,0.003965386,0.5883282,0.000257258,0.00022993251,0.00024582367,0.00014373171,0.016964445,0.13224275,0.023053003,0.22811887,0.00086768385],"about_ca_topic_score_codex":0.000009246414,"about_ca_topic_score_gemma":0.0000010780931,"teacher_disagreement_score":0.55739546,"about_ca_system_score_codex":0.00000998022,"about_ca_system_score_gemma":0.000011544732,"threshold_uncertainty_score":0.27716166},"labels":[],"label_agreement":null},{"id":"W2405265970","doi":"10.1007/978-1-59745-514-5_13","title":"An Introduction to the Lagan Alignment Toolkit","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Algorithms and Data Compression","field":"Computer Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Computer science","score_opus":0.01809006376225506,"score_gpt":0.3937985868039047,"score_spread":0.37570852304164964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405265970","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002401642,0.000087284694,0.99206233,0.0043290164,0.00082023867,0.00014896702,9.687909e-7,0.000038202044,0.0001113606],"genre_scores_gemma":[0.004405949,0.0000032128476,0.99400777,0.0012903699,0.00025029332,0.000010662836,0.000006566736,0.000004907775,0.000020249305],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983282,0.00071160094,0.000190937,0.00042519558,0.0000805171,0.0002635157],"domain_scores_gemma":[0.99889874,0.00008611367,0.00003897357,0.00088356674,0.000027390646,0.00006520419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034596717,0.000090117464,0.00011086328,0.000106152365,0.00006170613,0.000036267043,0.0008671091,0.0000722931,0.000008515343],"category_scores_gemma":[0.000121881196,0.000060688624,0.000025849984,0.00035377798,0.0000308114,0.0000780969,0.0003391398,0.00012197848,0.000009888095],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000697005,0.000037952537,0.000100086094,8.4369026e-7,0.000004098367,0.0000120035675,0.00020685689,0.0002561149,0.4286698,0.08485854,0.00029778585,0.48554894],"study_design_scores_gemma":[0.00027322464,0.00048692676,0.0028450105,0.0000050919557,0.0000047508856,0.00004449573,0.00007914285,0.016336171,0.49845368,0.030159753,0.45100093,0.00031082032],"about_ca_topic_score_codex":0.000039090708,"about_ca_topic_score_gemma":0.000013683814,"teacher_disagreement_score":0.48523813,"about_ca_system_score_codex":0.000034691082,"about_ca_system_score_gemma":0.000013527635,"threshold_uncertainty_score":0.24748102},"labels":[],"label_agreement":null},{"id":"W2405290430","doi":"10.1007/978-1-4939-2547-6_7","title":"Detection and Labeling of Small Non-Coding RNAs by Splinted Ligation","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Ligation; Nucleic acid; Oligonucleotide; RNA; microRNA; DNA; Long non-coding RNA; Small RNA; Molecular biology; Computational biology; Biology; Chemistry; Biochemistry; Gene","score_opus":0.022739138293546277,"score_gpt":0.34948622462756634,"score_spread":0.32674708633402005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405290430","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38940126,0.0008965371,0.60942936,0.000019766836,0.00007050568,0.00010770234,0.00000327738,0.0000045001934,0.00006708518],"genre_scores_gemma":[0.59202117,0.000050662744,0.40772125,0.000059422786,0.000031174968,0.000016151862,0.00006639911,0.00001671011,0.000017044295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988316,0.0004031659,0.00026713934,0.00030142412,0.000040221075,0.00015639637],"domain_scores_gemma":[0.99948263,0.000024691171,0.00012882502,0.00020080575,0.00009974715,0.000063276406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008993943,0.000117973286,0.00016896553,0.000090695976,0.000017779113,0.0000061711485,0.00008949378,0.00023704878,0.000001468327],"category_scores_gemma":[0.00051639153,0.0001240911,0.000040458803,0.00013006091,0.00008487746,0.0000023264838,0.00009415781,0.0000785837,5.355439e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053848536,0.000020154697,0.0008547047,0.000017091548,0.000021384449,8.0503105e-7,0.00003253176,0.00008832504,0.981101,0.000059318463,0.000008682771,0.017742166],"study_design_scores_gemma":[0.0005442533,0.00016567337,0.00029068947,0.000015744716,0.000015619427,0.000007918812,0.00003574635,0.002162275,0.99482876,0.0011266513,0.0006848709,0.00012179966],"about_ca_topic_score_codex":0.000044682223,"about_ca_topic_score_gemma":0.000015323569,"teacher_disagreement_score":0.20261993,"about_ca_system_score_codex":0.000023432356,"about_ca_system_score_gemma":0.000035116038,"threshold_uncertainty_score":0.5060288},"labels":[],"label_agreement":null},{"id":"W2405338627","doi":"10.1007/978-1-61779-117-8_25","title":"NMR Spectroscopy to Study the Dynamics and Interactions of CFTR","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; General Electric (Canada); University of Toronto","funders":"","keywords":"Cystic fibrosis transmembrane conductance regulator; Chloride channel; Gating; Nuclear magnetic resonance spectroscopy; Chemistry; Cyclic nucleotide-binding domain; Biophysics; Phosphorylation; ΔF508; Mutant; Cystic fibrosis; Membrane biology; Nuclear magnetic resonance; Nucleotide; Biochemistry; Biology; Membrane; Gene; Genetics; Stereochemistry; Physics","score_opus":0.049633180982777005,"score_gpt":0.4888808651809142,"score_spread":0.4392476841981372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405338627","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3621321,0.00017147294,0.63615775,0.00024578685,0.000052784486,0.00040752947,0.000002781337,0.0000059714025,0.0008238089],"genre_scores_gemma":[0.24429747,0.000010985391,0.75549567,0.00009886484,0.0000076009624,0.000039753988,0.000001549159,0.00000724754,0.000040848317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872184,0.0006678939,0.00019215338,0.00019361707,0.000058061793,0.00016644911],"domain_scores_gemma":[0.9992704,0.00029610322,0.000036892474,0.000297646,0.00004562715,0.00005334774],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008224819,0.00007517759,0.0002217089,0.00014047427,0.000021103157,0.0000024945916,0.00011168643,0.000030686282,0.00006385621],"category_scores_gemma":[0.0011905393,0.000049531376,0.000028989676,0.00024093396,0.0001489425,0.000010458791,0.00013736916,0.00018900275,0.0000019849929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026692636,0.0002542,0.039147075,0.00001120322,0.00007245819,0.000024053083,0.00093812135,0.0000015683439,0.92635554,0.0037744679,0.000005020666,0.029149374],"study_design_scores_gemma":[0.0014943535,0.0053719524,0.19254972,0.000047015128,0.00010245023,0.000099535166,0.0036579508,0.0017871857,0.7786114,0.015460965,0.00063659856,0.00018082098],"about_ca_topic_score_codex":0.00016836337,"about_ca_topic_score_gemma":0.00014495417,"teacher_disagreement_score":0.15340266,"about_ca_system_score_codex":0.000035524976,"about_ca_system_score_gemma":0.000021844919,"threshold_uncertainty_score":0.2019831},"labels":[],"label_agreement":null},{"id":"W2405350709","doi":"10.1007/978-1-4939-1161-5_9","title":"Ex Vivo Generation of Murine IL-10-Producing B Cells by Fusokines","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Ex vivo; In vivo; Biology; Regulatory B cells; Cell biology; Immunology; Transgene; Splenocyte; B cell; Secretion; Antibody; Gene; Biochemistry; Biotechnology","score_opus":0.019809636347846184,"score_gpt":0.3257459469797796,"score_spread":0.30593631063193344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405350709","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13679723,0.0013293679,0.8547043,0.00017761542,0.004247518,0.00017959888,0.0000061048436,0.000038091446,0.0025201538],"genre_scores_gemma":[0.53034955,0.00040159724,0.42066815,0.002193853,0.00032567407,0.00010486526,0.0010425134,0.00011054245,0.044803265],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971093,0.0018481608,0.00042642167,0.00036359057,0.00001676317,0.00023574081],"domain_scores_gemma":[0.9992354,0.00015880889,0.00017733149,0.00033629834,0.00008146875,0.00001072475],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011260104,0.00015778442,0.00032368646,0.0001778594,0.00004463922,0.0000046097966,0.00014443322,0.0002957489,0.0015509789],"category_scores_gemma":[0.0004094194,0.0001450567,0.0000854479,0.00014669752,0.0001237996,0.00003439187,0.00006425375,0.0002145207,0.00008792898],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054600532,0.00006987758,0.00010535001,0.000010771698,0.000038227343,3.3744465e-7,0.00006845442,0.000039326947,0.98012036,0.00050665444,0.006553024,0.012433014],"study_design_scores_gemma":[0.00044750038,0.00021499599,0.00003293395,0.000006710156,0.000012654573,0.000008165937,0.000019509129,0.00014838058,0.78441554,0.00014642153,0.21443807,0.00010911793],"about_ca_topic_score_codex":0.00012481773,"about_ca_topic_score_gemma":0.000005612758,"teacher_disagreement_score":0.43403617,"about_ca_system_score_codex":0.00002554553,"about_ca_system_score_gemma":0.000012884482,"threshold_uncertainty_score":0.99936175},"labels":[],"label_agreement":null},{"id":"W2405767181","doi":"10.1007/978-1-60761-697-9_11","title":"Photodynamic Therapy-Generated Cancer Vaccines","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photodynamic Therapy Research Studies","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Photodynamic therapy; Cancer; Medicine; Cancer therapy; Basal cell; Immune system; Cancer research; Cancer vaccine; Immunology; Oncology; Immunotherapy; Internal medicine; Chemistry","score_opus":0.028870072478569434,"score_gpt":0.4578611946793962,"score_spread":0.42899112220082675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405767181","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9666678,0.002782902,0.027267547,0.0012475947,0.00055459735,0.00058947294,0.000011729236,0.00007079052,0.0008075667],"genre_scores_gemma":[0.47827628,0.0025707982,0.51523143,0.0023975035,0.0001838413,0.0006076633,0.00004550462,0.0000825425,0.0006044301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803615,0.0006499738,0.00029549893,0.00044097737,0.000097795535,0.00047963593],"domain_scores_gemma":[0.99906486,0.00018557557,0.00006362846,0.0004625565,0.00012480923,0.000098573306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011316644,0.00022369216,0.0004951507,0.00027785005,0.000049685514,0.000008322517,0.0002126015,0.00025061145,0.0005748886],"category_scores_gemma":[0.0004885122,0.00016836001,0.0001095458,0.00047612572,0.0001919632,0.000017263981,0.0000861279,0.0007014935,0.0000057383313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018296341,0.00008936959,0.0055322186,0.000010742646,0.00014297603,0.000048259,0.00006882766,0.0000042945207,0.9244725,0.0003546133,0.000025440762,0.06906778],"study_design_scores_gemma":[0.0021073646,0.00027837546,0.016801825,0.000015164599,0.000016462416,0.000042692136,0.000021086771,0.0009073924,0.96971625,0.0021967527,0.007692476,0.00020416274],"about_ca_topic_score_codex":0.0006051156,"about_ca_topic_score_gemma":0.0005226177,"teacher_disagreement_score":0.48839152,"about_ca_system_score_codex":0.00005639589,"about_ca_system_score_gemma":0.00015821423,"threshold_uncertainty_score":0.68655217},"labels":[],"label_agreement":null},{"id":"W2405806687","doi":"10.1007/978-1-4939-1568-2_21","title":"Measurement of Nitric Oxide in Mast Cells with the Fluorescent Indicator DAF-FM Diacetate","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Nitric oxide; Fluorescence; Mast (botany); Chemistry; Biophysics; Mast cell; Immunology; Biology; Physics; Optics; Organic chemistry","score_opus":0.012453985684646214,"score_gpt":0.27833926426214073,"score_spread":0.2658852785774945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405806687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52948815,0.004722836,0.46338785,0.00038850243,0.000246356,0.0005437758,0.0000095798305,0.000018735567,0.0011942417],"genre_scores_gemma":[0.92291963,0.000068453206,0.07655135,0.00028398834,0.0000091154125,0.000044085475,0.000013569417,0.00002249323,0.00008733434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960235,0.0027793425,0.00039752905,0.0003549742,0.000047417798,0.00039724883],"domain_scores_gemma":[0.999125,0.00017648967,0.00019714564,0.00043096062,0.000050072842,0.000020337115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029085302,0.00019590798,0.00046082115,0.00026467576,0.000040508698,0.0000037673008,0.00035822552,0.00022756081,0.00009853464],"category_scores_gemma":[0.00013322665,0.00012480942,0.000068950496,0.00029793815,0.0004140325,0.000009737026,0.00011796063,0.00037673415,0.000024994077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011105776,0.00012148993,0.0058585997,0.000027686752,0.000057680347,0.000005127879,0.00010441601,0.000046376277,0.9796617,0.0014873235,0.000033551256,0.012484994],"study_design_scores_gemma":[0.0014872771,0.00023389325,0.013684865,0.000029443292,0.000034439447,0.000009118672,0.00007622265,0.00002588886,0.96360266,0.00031201658,0.020319602,0.00018457303],"about_ca_topic_score_codex":0.00021136826,"about_ca_topic_score_gemma":0.00011643371,"teacher_disagreement_score":0.39343148,"about_ca_system_score_codex":0.00005037629,"about_ca_system_score_gemma":0.000043040567,"threshold_uncertainty_score":0.50895804},"labels":[],"label_agreement":null},{"id":"W2405814233","doi":"10.1007/978-1-4939-1568-2_32","title":"Methods in Assessment of Airway Reactivity in Mice","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut universitaire de cardiologie et de pneumologie de Québec; University of British Columbia","funders":"","keywords":"Airway; Reactivity (psychology); Medicine; Pathology; Anesthesia","score_opus":0.027484413922533226,"score_gpt":0.47450614615276876,"score_spread":0.44702173223023556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405814233","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30160457,0.00039304476,0.6946769,0.0001533878,0.000096221724,0.00021707709,0.0000015657245,0.00000896581,0.0028482836],"genre_scores_gemma":[0.22185028,0.00001585473,0.7776499,0.00039237735,0.000018345352,0.00003505038,0.0000050861318,0.000013401179,0.000019745794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9924783,0.00634231,0.00046513887,0.00036562188,0.00007488858,0.00027369976],"domain_scores_gemma":[0.99867237,0.00076686277,0.00012282965,0.0003325587,0.000035096742,0.00007030007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046272124,0.00015073046,0.00064879336,0.00040852494,0.000008739215,0.0000018177592,0.00012100653,0.00023830192,0.00003214645],"category_scores_gemma":[0.0015996356,0.00012674229,0.000101467114,0.00041972948,0.00014748097,0.000018179891,0.00008632761,0.00035540317,9.2484197e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050749786,0.00023537787,0.09343857,0.000049739865,0.000008712855,0.000031047424,0.000038473823,0.00003541309,0.72640324,0.0008884322,0.0000020939312,0.17881815],"study_design_scores_gemma":[0.0025317243,0.0007338802,0.37720892,0.00014602163,0.000038079535,0.000014689684,0.000116929295,0.003158101,0.6030192,0.004493808,0.008286365,0.00025230294],"about_ca_topic_score_codex":0.00015553084,"about_ca_topic_score_gemma":0.000041900625,"teacher_disagreement_score":0.28377035,"about_ca_system_score_codex":0.0000846131,"about_ca_system_score_gemma":0.00012885455,"threshold_uncertainty_score":0.51684004},"labels":[],"label_agreement":null},{"id":"W2405852961","doi":"10.1007/978-1-4939-1755-6_8","title":"High Resolution Imaging and Function of Nuclear G Protein-Coupled Receptors (GPCRs)","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Hôpital Maisonneuve-Rosemont; Université de Sherbrooke; McGill University","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Internalization; Cell biology; Nucleus; Confocal microscopy; Receptor; Nuclear transport; Inner membrane; Biology; Nuclear lamina; Cell nucleus; Nuclear membrane; Chemistry; Nuclear protein; Signal transduction; Transcription factor; Gene; Biochemistry","score_opus":0.008416533663112614,"score_gpt":0.289838784147859,"score_spread":0.2814222504847464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2405852961","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38499632,0.00040584878,0.61409205,0.0000559084,0.00019688378,0.00014002365,0.0000010537308,0.000008422691,0.00010350216],"genre_scores_gemma":[0.4907377,0.00004381209,0.5088789,0.00016450523,0.00007224716,0.000018803088,0.000030073292,0.000025868276,0.000028107563],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819595,0.0008000511,0.00030111638,0.00041268137,0.000056998815,0.00023322756],"domain_scores_gemma":[0.9994689,0.000025308707,0.0001359707,0.00026311303,0.00005964538,0.000047045043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013812176,0.0001533322,0.0002445831,0.00010572828,0.00004549347,0.000008809961,0.000119763514,0.00021200649,0.000049859253],"category_scores_gemma":[0.00034909154,0.00014830143,0.00006752307,0.00011109149,0.000114109636,0.0000032899763,0.00011707894,0.00011833966,0.0000012272856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009307271,0.000018449424,0.00023618864,0.000015645854,0.000017999173,4.6522402e-7,0.000016031983,0.000067332556,0.9621448,0.009468354,0.000012023248,0.027909653],"study_design_scores_gemma":[0.00061165914,0.0004803938,0.00019755219,0.000023157296,0.00001649072,0.0000048707643,0.0000485162,0.0026503426,0.9760104,0.009533923,0.010223106,0.00019961134],"about_ca_topic_score_codex":0.000066234556,"about_ca_topic_score_gemma":0.0000038946255,"teacher_disagreement_score":0.10574139,"about_ca_system_score_codex":0.000011634464,"about_ca_system_score_gemma":0.000015711694,"threshold_uncertainty_score":0.6047557},"labels":[],"label_agreement":null},{"id":"W2406047414","doi":"10.1007/978-1-61779-204-5_14","title":"Prohormone Processing in Zebrafish","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Marine Biosciences; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Proprotein Convertases; Zebrafish; Proteolysis; Proteases; Morpholino; Biology; Cell biology; Biochemistry; Gene; Enzyme","score_opus":0.0291019428437163,"score_gpt":0.35331182063658007,"score_spread":0.32420987779286375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406047414","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22201851,0.0027391592,0.767663,0.0000475703,0.00016645495,0.00045321195,0.0000031898062,0.000022217766,0.0068867006],"genre_scores_gemma":[0.36987928,0.000037382357,0.62929076,0.0004910738,0.000054483513,0.00013744744,0.000025132345,0.000029239542,0.000055239136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981085,0.00059221475,0.0003293129,0.000515383,0.00004973938,0.00040485422],"domain_scores_gemma":[0.99948037,0.000006226958,0.00008123417,0.00033599042,0.00003707024,0.00005912357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009890483,0.00018782548,0.00023556617,0.00015578793,0.000024435221,0.000007051492,0.00026637843,0.00034923674,0.000024380262],"category_scores_gemma":[0.00024055727,0.00018223764,0.00006908576,0.00023101596,0.000090705114,0.000004235897,0.00017331493,0.00019532775,0.0000045186416],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006847726,0.000096098585,0.0013895183,0.0000121021985,0.000006358936,0.000028891394,0.000087846405,0.0000013568684,0.98303884,0.0011543389,0.00001619934,0.014099944],"study_design_scores_gemma":[0.00051766547,0.00030941202,0.00047459695,0.000019176145,0.0000050070853,0.000016351762,0.0000384729,0.000065459215,0.98400277,0.012686655,0.0016346992,0.00022975302],"about_ca_topic_score_codex":0.00004812954,"about_ca_topic_score_gemma":0.000025004254,"teacher_disagreement_score":0.14786075,"about_ca_system_score_codex":0.000018412135,"about_ca_system_score_gemma":0.00006986671,"threshold_uncertainty_score":0.7431435},"labels":[],"label_agreement":null},{"id":"W2406105505","doi":"10.1007/978-1-4939-1755-6_14","title":"Tandem Affinity Purification to Identify Cytosolic and Nuclear Gβγ-Interacting Proteins","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University","funders":"","keywords":"Tandem affinity purification; Heterotrimeric G protein; Cytosol; Protein subunit; Chemistry; Biochemistry; Tandem mass spectrometry; Nucleus; Cell biology; Biology; Affinity chromatography; Mass spectrometry; G protein; Chromatography; Receptor; Gene; Enzyme","score_opus":0.02256118629193124,"score_gpt":0.3854451894904284,"score_spread":0.3628840031984971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406105505","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3726747,0.00017125097,0.62596184,0.00024134523,0.00007656717,0.00028864734,0.0000016973962,0.000016573946,0.0005673875],"genre_scores_gemma":[0.5564304,0.000013864993,0.4428304,0.00053699914,0.0000740496,0.00004695711,0.000021213957,0.000021510043,0.000024555118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977971,0.001068672,0.000294852,0.0005093068,0.00006111614,0.00026900313],"domain_scores_gemma":[0.99932206,0.000048675476,0.00011003714,0.00035678863,0.00005882327,0.00010359958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014849744,0.0001673076,0.00021103084,0.00013243931,0.00008017348,0.00003337324,0.00017223568,0.00023237373,0.000017095508],"category_scores_gemma":[0.001458507,0.00017148837,0.000061578416,0.00015915117,0.00007008738,0.00000425967,0.00018660621,0.00015158071,0.000008464939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030182022,0.00002387277,0.00070169783,0.000011381481,0.000012836079,0.0000016746003,0.000059453338,0.000048538488,0.97556585,0.0029055018,0.000010442531,0.020628592],"study_design_scores_gemma":[0.00043837476,0.00024042148,0.0025960938,0.000031826665,0.000010366001,0.000021744358,0.00004323466,0.00077651534,0.96572113,0.0024833449,0.027365807,0.00027113254],"about_ca_topic_score_codex":0.00002131244,"about_ca_topic_score_gemma":0.000012610844,"teacher_disagreement_score":0.18375573,"about_ca_system_score_codex":0.000017751352,"about_ca_system_score_gemma":0.00002050571,"threshold_uncertainty_score":0.6993093},"labels":[],"label_agreement":null},{"id":"W2406226695","doi":"10.1007/978-1-62703-968-0_3","title":"PCR-Based Bioprospecting for Homing Endonucleases in Fungal Mitochondrial rRNA Genes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Université de Montréal","funders":"","keywords":"Homing endonuclease; Bioprospecting; Mitochondrial DNA; Homing (biology); Biology; Endonuclease; Genome; Gene; Computational biology; Metagenomics; Genetics; Botany","score_opus":0.014840935072899804,"score_gpt":0.403408037158425,"score_spread":0.3885671020855252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406226695","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19760399,0.0013278421,0.80011815,0.000057582212,0.00044334028,0.00029928845,0.000007702357,0.000015545727,0.00012656311],"genre_scores_gemma":[0.25690204,0.00002545618,0.74232864,0.00020501968,0.00029646582,0.00012671882,0.0000457106,0.00004259131,0.00002733207],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824345,0.00029996855,0.0003638585,0.00057687203,0.000049743172,0.00046608524],"domain_scores_gemma":[0.9993084,0.00015577149,0.000073981966,0.0003588139,0.000041073552,0.00006195675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077025,0.00023035923,0.00031371467,0.00018328523,0.000043626915,0.000016293328,0.00023498952,0.00028774558,0.000005864344],"category_scores_gemma":[0.00089636166,0.00024133862,0.00014901577,0.00016074283,0.00007217524,0.0000018350789,0.000091701535,0.00013427463,9.773962e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000936586,0.000046515008,0.005129397,0.000028802557,0.000015378359,0.0000038461394,0.000015322777,0.0025905161,0.9630345,0.00053959637,0.0000074083528,0.028495034],"study_design_scores_gemma":[0.0018785772,0.00034140085,0.00058360345,0.000019632957,0.000012758867,0.000009785912,0.00002564955,0.0064495765,0.9799832,0.0011792728,0.009214035,0.0003025086],"about_ca_topic_score_codex":0.000038760714,"about_ca_topic_score_gemma":0.00006897674,"teacher_disagreement_score":0.059298057,"about_ca_system_score_codex":0.000023434115,"about_ca_system_score_gemma":0.000033672924,"threshold_uncertainty_score":0.98415035},"labels":[],"label_agreement":null},{"id":"W2406267632","doi":"10.1007/978-1-62703-643-6_20","title":"Lab-on-a-Chip for Studying Growing Pollen Tubes","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Concordia University","funders":"","keywords":"Polydimethylsiloxane; Microfluidics; Chip; Nanotechnology; Pollen tube; Wafer; Microfluidic chip; Lab-on-a-chip; Computer science; Pollen; Materials science; Biology; Botany; Telecommunications","score_opus":0.0328307075688833,"score_gpt":0.38112743689139006,"score_spread":0.34829672932250677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406267632","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.657142,0.0010750415,0.33883697,0.00060728384,0.0004819933,0.0009376403,0.000024972414,0.0000268259,0.0008672723],"genre_scores_gemma":[0.26106626,0.00007623381,0.7347826,0.0023860913,0.0003957065,0.0007521032,0.0002183925,0.00006756094,0.00025506367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968786,0.00111038,0.00037214937,0.0009876919,0.000055530032,0.0005956178],"domain_scores_gemma":[0.9989094,0.00021074922,0.00007143513,0.0006269184,0.000103597486,0.00007790038],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001328506,0.00029840102,0.000399702,0.00017769926,0.00007585679,0.000016495966,0.0004075779,0.00040264503,0.000023039716],"category_scores_gemma":[0.0013883546,0.00026579745,0.00016010753,0.00015026251,0.00016851374,0.0000053106064,0.00023574263,0.00019271282,0.000018260027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008126103,0.00006996964,0.005135977,0.000012259435,0.00008565023,0.000003683709,0.000023473169,0.000031536958,0.977623,0.002522546,0.00025150974,0.014159127],"study_design_scores_gemma":[0.0008539808,0.0008969923,0.0024214676,0.000012084114,0.000015715335,0.000027869753,0.00009503011,0.00006585337,0.97126603,0.007071848,0.016888227,0.00038488253],"about_ca_topic_score_codex":0.00005495967,"about_ca_topic_score_gemma":0.000006471003,"teacher_disagreement_score":0.39607573,"about_ca_system_score_codex":0.000029929293,"about_ca_system_score_gemma":0.000049990642,"threshold_uncertainty_score":0.99997944},"labels":[],"label_agreement":null},{"id":"W2406284018","doi":"10.1007/978-1-60761-594-1_22","title":"Ex Vivo Skin Infection Model","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"IDELIX Software (Canada)","funders":"","keywords":"Antibiotics; Antimicrobial; Ex vivo; Skin infection; Antimicrobial peptides; Microbiology; Biology; Human skin; In vivo; Bacteria; Biotechnology; Staphylococcus aureus","score_opus":0.013253288102759829,"score_gpt":0.35867883253279276,"score_spread":0.3454255444300329,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406284018","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39168927,0.00012758178,0.6070616,0.00014338188,0.000079894155,0.000087157714,0.0000040159466,0.000012357091,0.000794737],"genre_scores_gemma":[0.59762824,0.000101139914,0.4003991,0.0014116341,0.00010306793,0.000010788591,0.00015601324,0.000013296594,0.00017669871],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988154,0.00027109814,0.00023044282,0.0003925732,0.00004289511,0.00024759982],"domain_scores_gemma":[0.99958205,0.000007935909,0.00006372634,0.0002525419,0.000041004103,0.00005273733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026930118,0.00016319504,0.00017272956,0.000069735455,0.000026950845,0.000009878932,0.00013118442,0.00036429227,0.000014433822],"category_scores_gemma":[0.0001480953,0.00014879435,0.0000902749,0.00014582505,0.000057591173,0.0000029063397,0.000055849105,0.00010358698,0.000002151402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036488094,0.000023831535,0.00046317503,0.0000034086452,0.0000074665227,0.0000012259283,0.000010661204,0.00018321244,0.97319555,0.0011566277,0.00003306761,0.024885302],"study_design_scores_gemma":[0.00026387797,0.0001828414,0.0017997317,0.000003845812,0.000006043291,0.0000117945865,0.0000014653275,0.0022275555,0.98032063,0.012610663,0.0023783436,0.00019322154],"about_ca_topic_score_codex":0.000010074325,"about_ca_topic_score_gemma":0.0000033661347,"teacher_disagreement_score":0.20666252,"about_ca_system_score_codex":0.000015842737,"about_ca_system_score_gemma":0.000021869137,"threshold_uncertainty_score":0.60676575},"labels":[],"label_agreement":null},{"id":"W2406382456","doi":"10.1007/978-1-4614-3704-8_14","title":"pH-Induced Changes in Intrinsically Disordered Proteins","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Intrinsically disordered proteins; Circular dichroism; Globular protein; Chemistry; Biophysics; Amino acid; Protein structure; Crystallography; Biochemistry; Biology","score_opus":0.016449830112446377,"score_gpt":0.3591450471967752,"score_spread":0.3426952170843288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406382456","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53740835,0.0014103246,0.4592064,0.00029938464,0.00026851936,0.0005402818,0.0000065469667,0.000015277048,0.0008449056],"genre_scores_gemma":[0.57274306,0.00007928227,0.42614907,0.00056652515,0.00015055697,0.0001803941,0.00006291843,0.000030141602,0.000038035643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99763864,0.00094887975,0.00028738548,0.0004340788,0.00006516111,0.0006258307],"domain_scores_gemma":[0.99927944,0.000033697488,0.00008795797,0.00046924443,0.000033287408,0.000096355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010039797,0.00024274741,0.0003168826,0.00017309387,0.00002712571,0.000008375684,0.00029593956,0.0004948055,0.000015243015],"category_scores_gemma":[0.0006149922,0.00022529844,0.000074814525,0.00027120495,0.00009483933,0.000003583321,0.00026917606,0.00027345624,0.0000035349537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059549842,0.000080201164,0.0122904,0.00001186793,0.000018580937,0.0000056046315,0.0000642809,0.000006629505,0.9439579,0.0025286402,0.0000041003445,0.040972233],"study_design_scores_gemma":[0.00083788944,0.00035341256,0.0061851023,0.000012140264,0.000008553724,0.000020714053,0.000041589214,0.00005125193,0.979265,0.005035146,0.0078173615,0.000371847],"about_ca_topic_score_codex":0.000066044006,"about_ca_topic_score_gemma":0.00033016538,"teacher_disagreement_score":0.040600386,"about_ca_system_score_codex":0.00003036766,"about_ca_system_score_gemma":0.000048366477,"threshold_uncertainty_score":0.9187404},"labels":[],"label_agreement":null},{"id":"W2406422335","doi":"10.1007/978-1-62703-438-8_11","title":"Yeast as a Platform to Explore Polyglutamine Toxicity and Aggregation","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Yeast; Saccharomyces cerevisiae; Protein aggregation; Model organism; Biology; Toxicity; Organism; Computational biology; Cell biology; Genetics; Chemistry; Gene","score_opus":0.1682733248176869,"score_gpt":0.46473868301921756,"score_spread":0.29646535820153064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406422335","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007994689,0.875804,0.11360604,0.00005016274,0.00035403782,0.0018067912,0.000050263363,0.00004547625,0.00028854777],"genre_scores_gemma":[0.00004721605,0.8124612,0.18561709,0.00093140587,0.00005312393,0.0006716515,0.00002188908,0.00006605076,0.0001303802],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954017,0.002459183,0.0005197123,0.0010801852,0.000118294825,0.0004209356],"domain_scores_gemma":[0.99859864,0.00044860726,0.0002060541,0.0005198076,0.000030558404,0.00019635803],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00037650493,0.00046122412,0.0010956121,0.00043487307,0.000053231208,0.00004278234,0.00042564646,0.00030775074,0.000057578734],"category_scores_gemma":[0.0038035214,0.00038162482,0.00017369207,0.00055982504,0.0001758072,0.000034629495,0.0004124757,0.00030685277,0.00009649526],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003377096,0.000037532718,0.0000018248267,0.000356058,0.000006506604,0.000024711784,0.00003940581,0.0000013535519,0.23186997,0.00081347255,0.00001026196,0.7668355],"study_design_scores_gemma":[0.00023775823,0.0003489005,0.0000051521547,0.00080374087,0.000106508654,0.00012358234,0.000017455684,0.000023276205,0.687961,0.003412365,0.3063325,0.0006277719],"about_ca_topic_score_codex":0.00001681882,"about_ca_topic_score_gemma":0.0000021954186,"teacher_disagreement_score":0.76620775,"about_ca_system_score_codex":0.000059215003,"about_ca_system_score_gemma":0.000114246,"threshold_uncertainty_score":0.99986356},"labels":[],"label_agreement":null},{"id":"W2406460042","doi":"10.1007/978-1-4939-1363-3_10","title":"Synthetic Genetic Array Analysis for Global Mapping of Genetic Networks in Yeast","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Genetics; Biology; Mutant; Allele; Phenotype; Gene; Saccharomyces cerevisiae; Genetic analysis; Computational biology; Genetic screen; Mutation","score_opus":0.021029627779585666,"score_gpt":0.37013808780704915,"score_spread":0.3491084600274635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406460042","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23502295,0.0015994703,0.76261985,0.000036060686,0.00009661547,0.0002779631,0.000015994387,0.0000040935297,0.00032700173],"genre_scores_gemma":[0.55329794,0.00008965937,0.44633073,0.00007756351,0.000052705167,0.00007419823,0.000037954906,0.000016410479,0.000022840739],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99682415,0.0012326776,0.0005746099,0.0006935972,0.000099790945,0.0005751989],"domain_scores_gemma":[0.99896765,0.000095172545,0.00013115614,0.0006090987,0.00010201192,0.000094896604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012683324,0.0002323109,0.00051847077,0.00029262295,0.000027956938,0.0000108233535,0.00044893209,0.00036932845,0.000011694722],"category_scores_gemma":[0.0005625859,0.00023030228,0.00027657102,0.00088703586,0.00020240522,0.0000011094362,0.00016626834,0.00013810706,0.000001123267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006969807,0.00006768521,0.1030507,0.000033533277,0.0001620027,0.0000024991984,0.000014216604,0.028314935,0.8418065,0.00022374386,0.0000036077604,0.026250934],"study_design_scores_gemma":[0.0024842606,0.0013456476,0.18848807,0.00006194776,0.00024675098,0.000027399396,0.00007737732,0.064308025,0.72653365,0.009656757,0.0057879086,0.0009822148],"about_ca_topic_score_codex":0.000058780777,"about_ca_topic_score_gemma":0.00014752535,"teacher_disagreement_score":0.31827497,"about_ca_system_score_codex":0.000031105326,"about_ca_system_score_gemma":0.00005859492,"threshold_uncertainty_score":0.9391454},"labels":[],"label_agreement":null},{"id":"W2406728760","doi":"10.1007/978-1-61779-520-6_15","title":"A Medicinal Chemistry Perspective on Structure-Based Drug Design and Development","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Click Chemistry and Applications","field":"Chemistry","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"NeurAxon (Canada)","funders":"","keywords":"Perspective (graphical); Drug; Chemistry; Nanotechnology; Pharmacology; Computer science; Medicine; Materials science; Artificial intelligence","score_opus":0.07352937180437248,"score_gpt":0.4427344652062728,"score_spread":0.36920509340190033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406728760","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000015951613,0.7888219,0.20791887,0.000021681344,0.00002606608,0.0002363394,0.000030425655,0.000040377163,0.002888393],"genre_scores_gemma":[0.0000073586557,0.35825932,0.64072216,0.00007054046,0.0000735582,0.0004013265,0.00020298809,0.000059309827,0.00020346775],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99768573,0.00039794814,0.0005580204,0.0009296481,0.00007758395,0.00035106958],"domain_scores_gemma":[0.9982043,0.0007302392,0.00030606665,0.0005879734,0.000048643233,0.00012279412],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005659593,0.00054742425,0.0011808098,0.00007501913,0.00007009764,0.000011241206,0.00045447578,0.0007521334,0.00066804874],"category_scores_gemma":[0.00036326738,0.00046867155,0.00014855673,0.00017254052,0.00026001388,0.0000057783063,0.00011981364,0.00091207353,0.0000047163658],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027241944,0.000113692,0.0000019135016,0.0053779036,0.0001951791,0.00003639641,0.00017078155,0.0000034250868,0.06241696,0.0009929179,0.000025303745,0.9306383],"study_design_scores_gemma":[0.0002750028,0.000009236219,9.036187e-8,0.0015075351,0.00014367435,0.00004321658,0.00004701452,0.000008092563,0.34375533,0.0018618074,0.651902,0.00044698615],"about_ca_topic_score_codex":0.000013178572,"about_ca_topic_score_gemma":8.169839e-7,"teacher_disagreement_score":0.9301913,"about_ca_system_score_codex":0.00032761332,"about_ca_system_score_gemma":0.0004883865,"threshold_uncertainty_score":0.9997765},"labels":[],"label_agreement":null},{"id":"W2406765013","doi":"10.1007/978-1-60327-353-4_20","title":"Rapid Detection of the Escherichia coli Genospecies in Water by Conventional and Real-Time PCR","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval","funders":"","keywords":"Escherichia coli; Shigella; Biology; Microbiology; Escherichia; Gene; Genetics","score_opus":0.022915280101047108,"score_gpt":0.3559497260263463,"score_spread":0.3330344459252992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406765013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9878495,0.0011020817,0.00985068,0.0003325292,0.000089138026,0.00023693737,0.0000049395408,0.000005033842,0.00052917545],"genre_scores_gemma":[0.9166489,0.0005722026,0.08223698,0.00025251572,0.000044697787,0.00006870387,0.00002370401,0.000012953968,0.00013929479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983664,0.001005606,0.00018459692,0.00012635201,0.000064924316,0.0002521003],"domain_scores_gemma":[0.99958456,0.00015520364,0.00003182663,0.00014235923,0.000028352459,0.000057696885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012006332,0.000070613634,0.00020569954,0.00008024941,0.000017078653,0.0000027028834,0.00005469997,0.00011657732,0.00022176272],"category_scores_gemma":[0.00035930666,0.000044481974,0.00004670423,0.00012311648,0.00016121722,0.000018255383,0.000079611,0.00013435609,0.0000040999653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078048346,0.000068681475,0.072452694,0.000021929949,0.000016997737,0.0000014704477,0.00006738476,7.529746e-8,0.9234548,0.00012569084,0.000030799776,0.0036814038],"study_design_scores_gemma":[0.0005283834,0.00012588264,0.15996762,0.00001110355,0.000010325485,0.0000063608263,0.000016407763,0.000018844998,0.8356489,0.00034189387,0.0032814965,0.00004282315],"about_ca_topic_score_codex":0.00017518926,"about_ca_topic_score_gemma":0.0000056680024,"teacher_disagreement_score":0.08780596,"about_ca_system_score_codex":0.000031054762,"about_ca_system_score_gemma":0.000016625414,"threshold_uncertainty_score":0.24281463},"labels":[],"label_agreement":null},{"id":"W2406790899","doi":"10.1007/978-1-61779-968-6_18","title":"Stable Expression of Chimeric Heavy Chain Antibodies in CHO Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Institute for Biological Sciences; Biotechnology Research Institute","funders":"","keywords":"Chinese hamster ovary cell; Antibody; Laboratory flask; Single-domain antibody; Cell culture; Molecular biology; Immunoglobulin light chain; Biology; Chemistry; Heavy chain; Shaker; Computational biology; Genetics","score_opus":0.015659401663029256,"score_gpt":0.36616013502062583,"score_spread":0.35050073335759657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406790899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72067696,0.0072021694,0.27001718,0.000023042163,0.0005609499,0.00034196113,0.000018276496,0.0000111140625,0.0011483576],"genre_scores_gemma":[0.7965567,0.0004910627,0.20234872,0.00023195577,0.00010513125,0.000088507986,0.00004803558,0.000029965284,0.00009987748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99763525,0.001027435,0.0003991828,0.00036439,0.00006795381,0.00050577754],"domain_scores_gemma":[0.9992616,0.000044958255,0.00014420388,0.0004166197,0.000035600722,0.00009701657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008671922,0.00020890498,0.00034170036,0.00018043128,0.000033640168,0.0000053863096,0.00020463682,0.00028462408,0.00005042668],"category_scores_gemma":[0.00020218852,0.00018794906,0.00012373917,0.00023926217,0.0001325905,0.000006274165,0.00023672738,0.00015036446,0.0000030671936],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000869057,0.0002244303,0.034730952,0.000030927065,0.000012233261,0.0000020994935,0.00007038969,0.00025309075,0.9617507,0.00015233901,0.00015171249,0.0025342372],"study_design_scores_gemma":[0.0004838514,0.00018124719,0.002621801,0.000034484077,0.0000062996255,0.000004113717,0.0000567294,0.00003718769,0.9909033,0.0004984007,0.00496304,0.00020954332],"about_ca_topic_score_codex":0.00009918396,"about_ca_topic_score_gemma":0.000009481153,"teacher_disagreement_score":0.07587978,"about_ca_system_score_codex":0.000017584562,"about_ca_system_score_gemma":0.000038681977,"threshold_uncertainty_score":0.766434},"labels":[],"label_agreement":null},{"id":"W2406835101","doi":"10.1007/978-1-59745-540-4_2","title":"Identification of Transcription Factor Targets by Phenotypic Activation and Microarray Expression Profiling in Yeast","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biology; Transcription factor; Phenotype; Genetics; Microarray analysis techniques; Gene; Gene expression profiling; Promoter; Computational biology; ORFS; Yeast; Saccharomyces cerevisiae; Microarray; Gene expression; Open reading frame; Peptide sequence","score_opus":0.017987712095115467,"score_gpt":0.3635016420403407,"score_spread":0.34551392994522523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406835101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61118907,0.0010803199,0.38743263,0.000058115053,0.000030564046,0.00016373621,0.000011647027,0.0000023864375,0.00003151619],"genre_scores_gemma":[0.9123082,0.00015149164,0.08731551,0.00004864534,0.000015615647,0.000016153006,0.000103921426,0.000008602438,0.00003186814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862283,0.0004998127,0.00029533016,0.00033640137,0.00006047956,0.00018515192],"domain_scores_gemma":[0.9996573,0.000013383862,0.000078759265,0.0001720211,0.000045519,0.00003301882],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048736742,0.00010855116,0.00015048594,0.00012282391,0.000018430968,0.0000070161195,0.00011216197,0.0002126026,0.000004894111],"category_scores_gemma":[0.00015667416,0.00010454679,0.000033088614,0.00013357861,0.00006161462,0.000004220863,0.000028679406,0.00011852937,4.2105012e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101746926,0.00006884896,0.0015624053,0.000018962251,0.0000043677423,3.5064247e-7,0.00006601883,0.00002958173,0.98091465,0.00006442354,0.0000055439227,0.017163124],"study_design_scores_gemma":[0.00040949814,0.0001721755,0.004241104,0.000015356765,0.0000018861717,0.0000010966841,0.000029571152,0.00016039838,0.99372685,0.00096479774,0.00017744012,0.00009980423],"about_ca_topic_score_codex":0.000008970311,"about_ca_topic_score_gemma":0.0000024950684,"teacher_disagreement_score":0.30111912,"about_ca_system_score_codex":0.000013932902,"about_ca_system_score_gemma":0.000022063969,"threshold_uncertainty_score":0.42632943},"labels":[],"label_agreement":null},{"id":"W2406842301","doi":"10.1007/978-1-4939-2877-4_7","title":"Probing of Nascent Riboswitch Transcripts","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Riboswitch; RNase P; RNA; Computational biology; Nucleic acid structure; Biology; Gene expression; RNase H; Non-coding RNA; Chemistry; Gene; Cell biology; Genetics","score_opus":0.04164268769889818,"score_gpt":0.37154132695068776,"score_spread":0.3298986392517896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406842301","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1501443,0.0021362808,0.8457934,0.00011101124,0.00025754227,0.00026605,0.0000047762437,0.000008953269,0.0012776846],"genre_scores_gemma":[0.31357494,0.00005764839,0.68589914,0.0002141566,0.00004749661,0.000060352293,0.0000248807,0.000027383474,0.00009401648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785495,0.0010403367,0.00034742107,0.0003849998,0.000080541424,0.00029175816],"domain_scores_gemma":[0.9992998,0.000022962873,0.00010294873,0.0004020762,0.00008292928,0.00008925563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001665616,0.00016928888,0.00029095585,0.00009456174,0.000015876998,0.000004960335,0.00028536192,0.00029036263,0.000009928918],"category_scores_gemma":[0.00041068994,0.00015657512,0.000112831534,0.00014756076,0.000096029056,0.0000017640396,0.000089557914,0.00009701117,0.0000024583805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008402825,0.000055292036,0.00050356996,0.000013547995,0.000034475812,0.000005410194,0.00010033341,0.00003608907,0.97998583,0.0020677357,0.000022433258,0.017091224],"study_design_scores_gemma":[0.00055767683,0.0003887837,0.000039192928,0.000014409537,0.000012039452,0.000013246425,0.000070267975,0.000026021773,0.98075897,0.0065532164,0.011395044,0.0001711194],"about_ca_topic_score_codex":0.000033397726,"about_ca_topic_score_gemma":0.000008102472,"teacher_disagreement_score":0.16343066,"about_ca_system_score_codex":0.000015783025,"about_ca_system_score_gemma":0.00009297012,"threshold_uncertainty_score":0.6384948},"labels":[],"label_agreement":null},{"id":"W2406976071","doi":"10.1007/978-1-59745-477-3_1","title":"Using Reverse Genetics to Develop Small Knockout Collections for Specific Biological Questions","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Arabidopsis; Computational biology; Genetics; Reverse genetics; Biology; Gene; Gene knockout; Computer science; Genome; Mutant","score_opus":0.24384639443391898,"score_gpt":0.4270268561139647,"score_spread":0.1831804616800457,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2406976071","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5446287,0.0005036142,0.4529536,0.00052797666,0.000201777,0.0007738114,0.00012944396,0.00005026127,0.0002307924],"genre_scores_gemma":[0.009159362,0.0002603159,0.9891614,0.00069699937,0.00011269177,0.00018710493,0.00016960362,0.0000039484967,0.0002486032],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99660593,0.0015886768,0.00039446197,0.00067516626,0.00006784582,0.00066788995],"domain_scores_gemma":[0.99858904,0.0007874663,0.000069831905,0.00013992892,0.00024345219,0.00017031108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011505819,0.00022796637,0.00037814668,0.00012622373,0.0004232192,0.000018153005,0.00044798656,0.00044024864,0.00006444919],"category_scores_gemma":[0.001470481,0.00011367393,0.00011731885,0.0015254816,0.00025725452,0.000012286881,0.00024746868,0.00025804839,0.000014836588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055201774,0.00006843508,0.0049559865,0.0000016713853,0.00001761279,0.000037420417,0.000029271105,0.00006127424,0.9846174,0.0005191124,0.00022793026,0.0094087],"study_design_scores_gemma":[0.00086722715,0.0019831213,0.026388086,0.00003942456,0.00002636443,0.00068891636,0.0001470931,0.0007819573,0.5036512,0.008977297,0.4552014,0.00124792],"about_ca_topic_score_codex":0.00013544741,"about_ca_topic_score_gemma":0.00025005097,"teacher_disagreement_score":0.53620774,"about_ca_system_score_codex":0.00009418268,"about_ca_system_score_gemma":0.00007244244,"threshold_uncertainty_score":0.46354884},"labels":[],"label_agreement":null},{"id":"W2407091547","doi":"10.1007/978-1-61779-117-8_14","title":"Introduction to Section III: Biochemical Methods to Study CFTR Protein","year":2011,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cystic fibrosis; Cystic fibrosis transmembrane conductance regulator; Section (typography); Computational biology; Workflow; Endocytic cycle; Biogenesis; Transmembrane protein; Bioinformatics; Biology; Computer science; Cell biology; Gene; Cell; Genetics; Endocytosis","score_opus":0.04270312327352498,"score_gpt":0.4522539884809564,"score_spread":0.4095508652074314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407091547","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017018656,0.00079064886,0.9810684,0.0010163502,0.00077056553,0.004802072,0.000009286564,0.00008964426,0.009751194],"genre_scores_gemma":[0.000104579696,0.000010656077,0.9684543,0.00028928183,0.0010680514,0.0006595677,0.0000509713,0.00011246438,0.029250138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99525285,0.0016197925,0.00078067934,0.0014926349,0.0002747701,0.0005792602],"domain_scores_gemma":[0.9978546,0.00022466351,0.00016069436,0.0011225655,0.00027693508,0.00036053982],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0039455644,0.0005174966,0.0011887883,0.0011058779,0.000048868482,0.000014095357,0.00032079715,0.0007039999,0.0007881524],"category_scores_gemma":[0.0038863237,0.00047331888,0.00019493155,0.00032635286,0.00017050638,0.000021913811,0.00048553778,0.0011759258,0.00007796592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00093695935,0.00015571275,0.000017181046,0.00005598199,0.00017480594,0.00006330037,0.00015436842,0.0000025785307,0.8378255,0.0026222796,0.00036695204,0.15762441],"study_design_scores_gemma":[0.0009761244,0.004781639,0.00009711766,0.00013981729,0.00014031287,0.00008726608,0.000040910796,0.000007430059,0.6764733,0.021410732,0.29533267,0.0005126521],"about_ca_topic_score_codex":0.000117650045,"about_ca_topic_score_gemma":0.000016181317,"teacher_disagreement_score":0.29496574,"about_ca_system_score_codex":0.00037367677,"about_ca_system_score_gemma":0.00012254232,"threshold_uncertainty_score":0.99977183},"labels":[],"label_agreement":null},{"id":"W2407140897","doi":"10.1007/978-1-62703-005-2_11","title":"Cell Culture Assays to Evaluate Bacterial Toxicity and Virulence","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Virulence; CagA; Microbiology; Helicobacter pylori; Virulence factor; Biology; Toxicity; Medicine; Gene; Genetics","score_opus":0.03077498574057128,"score_gpt":0.39660661509707534,"score_spread":0.36583162935650404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407140897","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82415897,0.0012803397,0.17198731,0.00089241075,0.00056321773,0.0003690799,0.0000083356435,0.000033726046,0.00070658425],"genre_scores_gemma":[0.23030488,0.00014523507,0.7654377,0.0037196088,0.00017221828,0.00006975813,0.000013253547,0.000024646426,0.00011265715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99720126,0.0014395196,0.00030520806,0.00038187462,0.000076632154,0.00059547334],"domain_scores_gemma":[0.9992494,0.00010009495,0.0000640623,0.00029101467,0.00007597082,0.00021945505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017531133,0.00022372176,0.0004885066,0.00014406037,0.000039285092,0.0000050824165,0.000106635525,0.00031046054,0.00004455249],"category_scores_gemma":[0.00087978074,0.00018063183,0.000055855933,0.00020924174,0.00016177713,0.000036312318,0.00024568383,0.00038052903,0.000027266118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017145483,0.00012272484,0.09078239,0.000017578079,0.00006567306,0.000016045926,0.00061337085,0.000001028788,0.9022837,0.00006451881,0.00014614296,0.005715366],"study_design_scores_gemma":[0.005004471,0.0026099377,0.19698952,0.00008185141,0.00034227862,0.00024697822,0.00018931489,0.00006483674,0.7712195,0.00064071827,0.022102814,0.0005077583],"about_ca_topic_score_codex":0.00001610789,"about_ca_topic_score_gemma":0.000004071208,"teacher_disagreement_score":0.5938541,"about_ca_system_score_codex":0.00006269884,"about_ca_system_score_gemma":0.00002002953,"threshold_uncertainty_score":0.7365952},"labels":[],"label_agreement":null},{"id":"W2407167578","doi":"10.1007/978-1-4939-1435-7_4","title":"Generation of Murine Xenograft Models of Brain Tumors from Primary Human Tissue for In Vivo Analysis of the Brain Tumor-Initiating Cell","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster Children's Hospital","funders":"","keywords":"In vivo; Brain tumor; Primary (astronomy); Pathology; Brain tissue; Cancer research; Medicine; Biology; Neuroscience; Genetics","score_opus":0.05064660844918299,"score_gpt":0.3993458424573325,"score_spread":0.3486992340081495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407167578","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51437384,0.00024904072,0.4845975,0.00013066338,0.000031726307,0.0002567509,0.00005241044,0.0000023638036,0.00030569787],"genre_scores_gemma":[0.5704321,0.0000053689787,0.42895773,0.00044576128,0.000025725529,0.000026349999,0.00007354088,0.000012765193,0.000020622692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976201,0.0011334406,0.000703872,0.0002784733,0.000095116244,0.00016898056],"domain_scores_gemma":[0.9985637,0.000526664,0.00039184233,0.00040167963,0.00008742903,0.0000286956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020137944,0.00012626794,0.0008411022,0.00039127978,0.00001597657,0.0000015696427,0.0001420481,0.000091177324,0.000036936774],"category_scores_gemma":[0.00047418443,0.00010092456,0.00022386154,0.00062707596,0.00011559338,0.000014024442,0.00007466087,0.000110166504,2.9721981e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004570597,0.000099996345,0.0031008031,0.0001241874,0.0001301199,0.0000013959967,0.00027915064,0.0029189212,0.98560363,0.0006993487,0.000014446123,0.006982267],"study_design_scores_gemma":[0.0011351681,0.00026104695,0.0023774707,0.000045170225,0.0003502118,6.363402e-7,0.000044383036,0.014416956,0.9785962,0.0024882006,0.00020176786,0.00008279018],"about_ca_topic_score_codex":0.0012768635,"about_ca_topic_score_gemma":0.00038979578,"teacher_disagreement_score":0.056058295,"about_ca_system_score_codex":0.000036285834,"about_ca_system_score_gemma":0.000054359265,"threshold_uncertainty_score":0.41155842},"labels":[],"label_agreement":null},{"id":"W2407186215","doi":"10.1007/978-1-0716-1186-9_11","title":"Isolation of Extracellular Vesicles for Proteomic Profiling","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Proteome; Cell biology; Proteomics; Biology; Microvesicles; Cell; Chemistry; Extracellular vesicles; Biochemistry; Gene; microRNA","score_opus":0.021403780680699574,"score_gpt":0.36991730845663445,"score_spread":0.34851352777593486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407186215","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33759096,0.006829255,0.6549051,0.000049914568,0.000108603694,0.00038405284,0.000017980274,0.000007404869,0.00010675838],"genre_scores_gemma":[0.1365649,0.000061695355,0.8626983,0.00007753023,0.00006743913,0.00014543254,0.0002404139,0.00003671237,0.000107529886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774987,0.00082782464,0.00048717824,0.0005602501,0.000062688414,0.00031219865],"domain_scores_gemma":[0.9989756,0.00007180546,0.00017768024,0.0005444058,0.00017113647,0.000059390968],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011016307,0.00018225853,0.00028387568,0.00008453852,0.0000339241,0.000008669586,0.00022436192,0.00030465276,0.00001116892],"category_scores_gemma":[0.0012661245,0.00020045781,0.00019161179,0.0001820764,0.00013715922,0.0000033151357,0.00014340343,0.00011141228,0.0000010441346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107135915,0.000113111324,0.004317162,0.0000824142,0.00005231158,0.000011260663,0.000018489834,0.00018756924,0.98366326,0.004828859,0.000008665502,0.0066097444],"study_design_scores_gemma":[0.0007181854,0.00017387922,0.00019596457,0.000017698127,0.00003203644,0.000009331867,0.000039483148,0.00092221535,0.98617357,0.010091581,0.0014206968,0.00020537438],"about_ca_topic_score_codex":0.0000031923703,"about_ca_topic_score_gemma":0.0000026127655,"teacher_disagreement_score":0.20779327,"about_ca_system_score_codex":0.000018022998,"about_ca_system_score_gemma":0.00016800225,"threshold_uncertainty_score":0.8174432},"labels":[],"label_agreement":null},{"id":"W2407196148","doi":"10.1007/978-1-61779-163-5_26","title":"Microdissection of Gonadal Tissues for Gene Expression Analyses","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Cancer Research Society; Kræftens Bekæmpelse","keywords":"Laser capture microdissection; Microdissection; Biology; Staining; Alkaline phosphatase; Molecular biology; Placental alkaline phosphatase; Cell; Germ cell; Gene expression; Cell type; RNA; Gene; Cell biology; Enzyme; Biochemistry; Genetics","score_opus":0.07082468518749661,"score_gpt":0.46859660482975096,"score_spread":0.39777191964225433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407196148","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10191767,0.0010658548,0.8959924,0.000019302013,0.00006682993,0.00036075138,0.00003281789,0.000014434839,0.0005299184],"genre_scores_gemma":[0.12566255,0.000106997904,0.8735503,0.00010198433,0.00003321246,0.00023354676,0.00023243418,0.000022100343,0.00005688996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854445,0.0003701779,0.00035482604,0.0004623395,0.000031439326,0.00023678973],"domain_scores_gemma":[0.9992279,0.00002546992,0.00015407476,0.00045847532,0.00009218706,0.00004189371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005197187,0.00016822519,0.00026087908,0.00012216822,0.000038282396,0.0000024963608,0.00026329767,0.00035148856,0.000020361687],"category_scores_gemma":[0.00016215166,0.00015529036,0.00015750366,0.00014226737,0.0001631299,0.0000016423455,0.000117211566,0.00007864142,5.5524373e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089272486,0.00008667806,0.0011652027,0.000011761854,0.00003430946,0.0000010744242,0.000027234666,0.000004708328,0.9921294,0.0013027482,0.00005625616,0.0050913743],"study_design_scores_gemma":[0.00027488236,0.00039892545,0.00033521483,0.000007274584,0.000021599324,0.000011014983,0.000021662494,0.000019748231,0.98748523,0.0052582617,0.006002875,0.00016333722],"about_ca_topic_score_codex":0.00006761885,"about_ca_topic_score_gemma":0.0000124608705,"teacher_disagreement_score":0.023744889,"about_ca_system_score_codex":0.0000087337185,"about_ca_system_score_gemma":0.00003153734,"threshold_uncertainty_score":0.63325566},"labels":[],"label_agreement":null},{"id":"W2407206627","doi":"10.1007/978-1-61779-867-2_27","title":"Gene Expression Analysis in Developing Embryos: In Situ Hybridization","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"In situ hybridization; Biology; Gene; Gene expression; Embryo; In situ; Computational biology; In vitro; Molecular biology; Genetics; Cell biology; Chemistry","score_opus":0.022948930813977482,"score_gpt":0.371526330490519,"score_spread":0.3485773996765415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407206627","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50932807,0.001357766,0.48892748,0.00004570844,0.00010522422,0.00009629857,8.576364e-7,0.0000033605545,0.00013522469],"genre_scores_gemma":[0.60972506,0.0002814744,0.38963833,0.00011504035,0.000077173645,0.000025578838,0.000092874674,0.000012662491,0.000031816544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978454,0.0008576939,0.0003749335,0.0004892154,0.00005521426,0.00037751195],"domain_scores_gemma":[0.9994897,0.000017147626,0.00009171136,0.00032041396,0.000036193716,0.000044825927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014204691,0.00015928013,0.00026485717,0.00042619708,0.000022485769,0.0000064986875,0.00014129854,0.0002712778,0.0000062539834],"category_scores_gemma":[0.00025028852,0.00015421245,0.00008098362,0.0007819557,0.000050842642,0.000004412706,0.0001523615,0.00012630773,0.0000017636328],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002278861,0.00005290722,0.13806312,0.000005698243,0.00002559311,0.0000028821432,0.00005524668,0.00088636,0.85824394,0.00015192477,0.0000036424897,0.0024858902],"study_design_scores_gemma":[0.0002676328,0.000044931727,0.057997007,0.00000801702,0.000018747916,0.0000047856142,0.000037021146,0.000095377814,0.9395952,0.00019379986,0.0015430923,0.00019438815],"about_ca_topic_score_codex":0.000038674072,"about_ca_topic_score_gemma":0.00007464233,"teacher_disagreement_score":0.10039698,"about_ca_system_score_codex":0.00004556345,"about_ca_system_score_gemma":0.000038166123,"threshold_uncertainty_score":0.6288601},"labels":[],"label_agreement":null},{"id":"W2407344160","doi":"10.1007/978-1-60327-164-6_15","title":"Measurement of the Rate of Attachment of Bacteriophage to Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":161,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Public Health Agency of Canada","funders":"","keywords":"Bacteriophage; Materials science; Environmental science; Chemistry; Biochemistry","score_opus":0.019160987905879088,"score_gpt":0.3538266140090989,"score_spread":0.3346656261032198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407344160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77751267,0.000051236664,0.22066872,0.00029368617,0.00021465348,0.0002659622,0.000008717238,0.0000026063797,0.0009817508],"genre_scores_gemma":[0.76713836,0.0000063736493,0.23251608,0.00029432037,0.0000028017014,0.000003864814,4.065038e-7,0.0000034684401,0.000034300985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988027,0.0005505735,0.0003149327,0.00015240411,0.000052512725,0.00012688112],"domain_scores_gemma":[0.99952286,0.000022889437,0.00014184548,0.00027459598,0.000013750467,0.000024040877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084396254,0.00007749981,0.00020104612,0.0000347736,0.00001147925,0.0000013529328,0.00023308382,0.000051117167,0.00021792087],"category_scores_gemma":[0.00006044505,0.00005626541,0.00008723206,0.0001944934,0.0000970284,0.000013439973,0.00012802788,0.000067229244,0.0000036764247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016469472,0.000081762904,0.00047483871,0.0000046556825,0.00000708833,5.1834684e-7,0.00009252604,0.00017372832,0.9887971,0.00006427637,0.000016878217,0.010270144],"study_design_scores_gemma":[0.00010634093,0.00014971891,0.06869905,0.000019973113,0.000008167958,8.8172425e-7,0.000009439095,0.0000075168637,0.9293344,0.00020372783,0.0014161525,0.000044602333],"about_ca_topic_score_codex":0.00019409666,"about_ca_topic_score_gemma":0.000024097273,"teacher_disagreement_score":0.068224214,"about_ca_system_score_codex":0.000056703426,"about_ca_system_score_gemma":0.000007774715,"threshold_uncertainty_score":0.23860808},"labels":[],"label_agreement":null},{"id":"W2407347688","doi":"10.1007/978-1-0716-3151-5","title":"Carbohydrate-Protein Interactions","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada; Kungliga Tekniska Högskolan; Norges Miljø- og Biovitenskapelige Universitet; Ben-Gurion University of the Negev; Danmarks Tekniske Universitet; Centre National de la Recherche Scientifique; Concordia University; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Weizmann Institute of Science; Indian National Science Academy; University of Alberta; Queen's University","keywords":"Carbohydrate; Computational biology; Computer science; Chemistry; Biochemistry; Biology","score_opus":0.03476666019440155,"score_gpt":0.439592748355934,"score_spread":0.4048260881615324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407347688","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46803817,0.00022057294,0.5258245,0.00065301696,0.0002608738,0.0004070221,0.0000110395695,0.000057718462,0.0045271204],"genre_scores_gemma":[0.66538,0.00008675775,0.32738984,0.00046094775,0.00016897712,0.0004933523,0.00041677803,0.00006962069,0.0055337143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790233,0.00091541035,0.0002497399,0.00044471447,0.0000787378,0.00040903728],"domain_scores_gemma":[0.9993321,0.000036446527,0.00004602925,0.00044012547,0.00006657879,0.00007877352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009813724,0.00014786223,0.00016701572,0.0003292207,0.00005669239,0.000016478443,0.00025582715,0.00019519178,0.00009322428],"category_scores_gemma":[0.0007140664,0.00014601395,0.000096771466,0.00067305035,0.00010486539,0.0000024310118,0.00023928091,0.00021901965,0.00011428926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003157154,0.000022787759,0.0006731755,0.0000064742912,0.000020411702,0.000018973431,0.000016662412,0.000114685645,0.9835025,0.0014103075,0.00012894663,0.014053483],"study_design_scores_gemma":[0.00035321907,0.0001289445,0.0005748929,0.000007808725,0.0000026462385,0.0000064738792,0.000032483338,0.0006126659,0.91044956,0.0045713545,0.08308298,0.00017696696],"about_ca_topic_score_codex":0.00006615221,"about_ca_topic_score_gemma":0.000052304524,"teacher_disagreement_score":0.19843464,"about_ca_system_score_codex":0.0000209555,"about_ca_system_score_gemma":0.00006222261,"threshold_uncertainty_score":0.5954276},"labels":[],"label_agreement":null},{"id":"W2407408969","doi":"10.1007/978-1-61779-276-2_11","title":"Using Coevolution to Predict Protein–Protein Interactions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Ontario Institute for Cancer Research","funders":"Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Ontario Ministry of Health and Long-Term Care; Universities Space Research Association","keywords":"Coevolution; Benchmark (surveying); Immunoprecipitation; Computational biology; Computer science; Protein–protein interaction; Obligate; Scope (computer science); Focus (optics); Biology; Artificial intelligence; Evolutionary biology; Machine learning; Genetics; Gene; Physics; Ecology; Geography","score_opus":0.04519276612433822,"score_gpt":0.37438948627506285,"score_spread":0.32919672015072465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407408969","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1530324,0.00017839315,0.8436296,0.000035568934,0.00019940751,0.0005100197,0.000008917366,0.000012905668,0.0023927977],"genre_scores_gemma":[0.23715045,0.0000034683624,0.76220673,0.0002693922,0.000074954805,0.000091988855,0.000029726049,0.000021128877,0.00015218252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843645,0.00042385008,0.00037235077,0.00035620484,0.0000458368,0.00036529824],"domain_scores_gemma":[0.9993,0.000007863644,0.000105668085,0.00042549404,0.000060432154,0.00010056399],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007124366,0.00018522266,0.00020011103,0.00014068212,0.000056039225,0.000009698252,0.0002501658,0.00025098777,0.000042957294],"category_scores_gemma":[0.00015763748,0.00018388614,0.00009160188,0.00019235548,0.00008703757,0.000004040605,0.00023779963,0.00019024214,0.00001059041],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073036674,0.000044476914,0.00033738033,0.000008804952,0.000033309483,0.0000029271,0.00008376618,0.00009633824,0.9869507,0.002797712,0.000032881755,0.009538661],"study_design_scores_gemma":[0.00051187794,0.0005462661,0.00035856193,0.0000529376,0.000020054104,0.000036727775,0.00007207174,0.002570331,0.96202403,0.01966753,0.013707602,0.00043198804],"about_ca_topic_score_codex":0.00010307472,"about_ca_topic_score_gemma":0.00003480495,"teacher_disagreement_score":0.08411803,"about_ca_system_score_codex":0.000039272818,"about_ca_system_score_gemma":0.00005931584,"threshold_uncertainty_score":0.7498659},"labels":[],"label_agreement":null},{"id":"W2407523645","doi":"10.1007/978-1-4939-0835-6_1","title":"Pseudogene Redux with New Biological Significance","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pseudogene; Biology; Selection (genetic algorithm); Evolutionary biology; Genetics; Genome; Gene; Computer science","score_opus":0.06578359045229584,"score_gpt":0.4153419362238635,"score_spread":0.34955834577156764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407523645","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000854384,0.74046993,0.2580816,0.000023552067,0.00021922031,0.00058035186,0.00002505779,0.0000071041127,0.0005077689],"genre_scores_gemma":[0.000013243152,0.6732361,0.32576683,0.00016285841,0.00026224175,0.00016078314,0.00013765233,0.000069684036,0.00019062829],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99544233,0.0016737639,0.00075443706,0.0013752508,0.00007837752,0.0006758148],"domain_scores_gemma":[0.9982307,0.00015739667,0.0003880346,0.0009949176,0.000060179682,0.00016878668],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010247908,0.0007573197,0.0020233328,0.00017342232,0.00005863475,0.00001910273,0.000761285,0.0011042145,0.000017191009],"category_scores_gemma":[0.00033894225,0.00054456986,0.00045736207,0.00031819442,0.00033262256,3.190666e-7,0.00041204967,0.00039630264,0.00001273311],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004139416,0.000048805705,0.00012719134,0.0005768285,0.00043057158,0.00001911103,0.000010122916,0.000016424348,0.10926675,0.0006805438,0.0001908234,0.8885914],"study_design_scores_gemma":[0.0003434642,0.00075128075,0.000012020831,0.00033666496,0.0001704682,0.00009135039,0.0000049676582,0.0000013943437,0.0051037506,0.0008243962,0.99162996,0.00073025865],"about_ca_topic_score_codex":0.000048201677,"about_ca_topic_score_gemma":0.000026900056,"teacher_disagreement_score":0.99143916,"about_ca_system_score_codex":0.000039680923,"about_ca_system_score_gemma":0.0004197972,"threshold_uncertainty_score":0.9997006},"labels":[],"label_agreement":null},{"id":"W2407571998","doi":"10.1007/978-1-61779-117-8_12","title":"Impact of MicroRNA in Normal and Pathological Respiratory Epithelia","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Montréal; Hôpital Saint-Luc; Centre Hospitalier de l’Université de Montréal","funders":"FP7 Health; Canceropôle PACA; Centre National de la Recherche Scientifique; Agence Nationale de la Recherche","keywords":"microRNA; Multicellular organism; Biology; Computational biology; Cystic fibrosis; Identification (biology); Bioinformatics; Gene; Genetics","score_opus":0.03236246472969374,"score_gpt":0.37691264392572554,"score_spread":0.3445501791960318,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407571998","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9170007,0.001773786,0.08054737,0.0000044877797,0.000037656017,0.0001578005,0.000012791645,0.000004196548,0.00046122007],"genre_scores_gemma":[0.73622876,0.00005089178,0.26357484,0.00007369078,0.000015576477,0.000017698254,0.000017641827,0.000014551935,0.0000063606826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979567,0.0010171462,0.00036076442,0.00037836222,0.000032666598,0.0002543747],"domain_scores_gemma":[0.9994501,0.000024815246,0.000112174384,0.00031641615,0.000039426042,0.000057090034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093882234,0.00015821269,0.00025188565,0.00015495367,0.000011054224,0.000002367624,0.00016341273,0.00032668805,0.00003262711],"category_scores_gemma":[0.00029720238,0.00013886267,0.00010606207,0.00013947202,0.00024101886,0.000002481208,0.00016869974,0.0001193147,0.0000010099121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011338367,0.000071552065,0.20477882,0.000007143749,0.000017424461,0.000017404418,0.00004435853,0.0000065140625,0.7905135,0.00015664738,0.000004253621,0.0042689852],"study_design_scores_gemma":[0.0005268487,0.00045885902,0.39410368,0.000008214109,0.000006912225,0.000016519336,0.0000098943765,0.000015099105,0.6031784,0.0013422535,0.00019733884,0.00013600719],"about_ca_topic_score_codex":0.00008817018,"about_ca_topic_score_gemma":0.000017489834,"teacher_disagreement_score":0.18932486,"about_ca_system_score_codex":0.000022560394,"about_ca_system_score_gemma":0.000062753745,"threshold_uncertainty_score":0.5662655},"labels":[],"label_agreement":null},{"id":"W2407589310","doi":"10.1007/978-1-61779-160-4_22","title":"Tandem Affinity Purification and Identification of Heterotrimeric G Protein-Associated Proteins","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Heterotrimeric G protein; G protein-coupled receptor; G protein; GTPase-activating protein; Cell biology; G beta-gamma complex; Effector; Biology; Gq alpha subunit; Chemistry; Signal transduction; Biochemistry","score_opus":0.03216474117281629,"score_gpt":0.3374844910139299,"score_spread":0.3053197498411136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407589310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5031966,0.00033680798,0.4959628,0.000007724884,0.000043558284,0.00033446206,0.0000032745638,0.0000061517085,0.00010863454],"genre_scores_gemma":[0.68326116,0.000037810034,0.3164907,0.000022130842,0.0000103572065,0.00010126506,0.000030965453,0.000013349246,0.000032225653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998121,0.00086666783,0.00040770686,0.0003675124,0.000052859144,0.00018421854],"domain_scores_gemma":[0.9993167,0.0000129272485,0.00026718294,0.0002783654,0.00008607203,0.000038762286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013972584,0.00013157091,0.00021124621,0.000095261836,0.000033736353,0.000005989271,0.00015766063,0.00022648448,0.000020257667],"category_scores_gemma":[0.0005017545,0.00012891667,0.000060419614,0.00016241029,0.00010712618,0.0000032755022,0.000074498195,0.00009767871,7.927936e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029602925,0.000082305305,0.0014374666,0.000011305246,0.000029113806,9.124694e-7,0.00007164693,0.0000023214184,0.99215895,0.0013763546,7.958499e-7,0.0047992077],"study_design_scores_gemma":[0.00028557907,0.000311989,0.0021535826,0.000011197178,0.00001093798,0.000002892953,0.000030965348,0.00006525103,0.99129647,0.0056107542,0.00008902245,0.00013135307],"about_ca_topic_score_codex":0.000045031786,"about_ca_topic_score_gemma":0.000006068036,"teacher_disagreement_score":0.18006459,"about_ca_system_score_codex":0.0000117329355,"about_ca_system_score_gemma":0.000032699998,"threshold_uncertainty_score":0.5257069},"labels":[],"label_agreement":null},{"id":"W2407600696","doi":"10.1007/978-1-61779-337-0_8","title":"Chemoproteomic Characterization of Protein Kinase Inhibitors Using Immobilized ATP","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Click Chemistry and Applications","field":"Chemistry","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Protein kinase A; Biochemistry; Kinase; Biology; c-Raf; MAP2K7; Proteome; Protein kinase inhibitor; Cell biology; Cyclin-dependent kinase 2; Chemistry; Computational biology","score_opus":0.04013352663578717,"score_gpt":0.361180753512918,"score_spread":0.32104722687713083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407600696","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79664105,0.000036386515,0.20223543,0.000015744017,0.000018472336,0.00015876803,0.000012177593,0.000022844963,0.0008591251],"genre_scores_gemma":[0.4776333,0.0000036524136,0.5220132,0.000021988144,0.000030846266,0.00015410538,0.000058481193,0.000020806681,0.00006359836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989424,0.00011844844,0.00039999763,0.0003106396,0.000040183302,0.00018837213],"domain_scores_gemma":[0.99928534,0.000028337246,0.00021783846,0.00038789198,0.00004165926,0.00003893197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033301098,0.00014070075,0.00025476151,0.000051731597,0.00002606844,0.0000034749803,0.0001891446,0.00025134053,0.00035374024],"category_scores_gemma":[0.00017445914,0.00014621831,0.00008110699,0.000200143,0.00013886817,0.000020136695,0.00008815896,0.00016548179,0.0000016806786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003325771,0.00011013832,0.0005471366,0.00007298631,0.000012330965,0.000002885687,0.00013074682,7.9140295e-7,0.9943166,0.00051123626,7.6283705e-8,0.0042618094],"study_design_scores_gemma":[0.00033485933,0.000011743821,0.00005530358,0.00004268394,0.000012240852,0.00000497858,0.000024205992,0.00018181028,0.9968178,0.0020289957,0.00034515382,0.00014019897],"about_ca_topic_score_codex":0.000060067443,"about_ca_topic_score_gemma":3.7489087e-7,"teacher_disagreement_score":0.3197778,"about_ca_system_score_codex":0.00003907717,"about_ca_system_score_gemma":0.000035926947,"threshold_uncertainty_score":0.59626096},"labels":[],"label_agreement":null},{"id":"W2407613345","doi":"10.1007/978-1-61779-818-4_25","title":"Basic Procedures for Epigenetic Analysis in Plant Cell and Tissue Culture","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Epigenetics; Somaclonal variation; Chromatin; DNA methylation; Biology; In vitro; Tissue culture; Computational biology; DNA; Cell biology; Genetics; Gene expression; Gene","score_opus":0.031097676356048064,"score_gpt":0.37210542211136033,"score_spread":0.3410077457553123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407613345","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9628162,0.00621204,0.029691234,0.0003016888,0.000062623934,0.0005857986,0.00010965508,0.000017813965,0.00020298651],"genre_scores_gemma":[0.8306255,0.00027596854,0.1680494,0.0003436111,0.00006233793,0.00018344751,0.00036627194,0.000002425309,0.000091090755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975447,0.0010954649,0.00025256444,0.00042358003,0.000059055517,0.0006246372],"domain_scores_gemma":[0.9992808,0.0004430686,0.00006179627,0.000079759055,0.000026255033,0.0001083356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014575366,0.00017583162,0.0003819166,0.00011292317,0.00005166764,0.000013312058,0.0002455299,0.00033595166,0.0000333912],"category_scores_gemma":[0.00038607657,0.00007662827,0.00008276829,0.0007483763,0.0001111933,0.000023312372,0.000120059085,0.00019053044,0.0000026661637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029696217,0.000065031294,0.13491297,0.00001269781,0.000030128302,0.0000065494714,0.00007569977,0.0000049388154,0.8551846,0.00024158365,0.000014553878,0.009421546],"study_design_scores_gemma":[0.0005231584,0.00064249814,0.24307822,0.000014803862,0.000115421666,0.000035349058,0.00018001905,0.0002720748,0.73760134,0.0034527166,0.0135702435,0.000514142],"about_ca_topic_score_codex":0.000116764975,"about_ca_topic_score_gemma":0.0007838523,"teacher_disagreement_score":0.13835816,"about_ca_system_score_codex":0.000020720496,"about_ca_system_score_gemma":0.000010440363,"threshold_uncertainty_score":0.31248102},"labels":[],"label_agreement":null},{"id":"W2407802670","doi":"10.1007/978-1-4939-3664-9_10","title":"Microinjection Technique for Assessment of Gap Junction Function","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Image Processing Techniques and Applications","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Microinjection; Computer science; Function (biology); Automation; Computational biology; Biology; Neuroscience; Engineering; Cell biology","score_opus":0.029586946502407924,"score_gpt":0.40769155102044624,"score_spread":0.3781046045180383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407802670","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00045434496,0.000081904334,0.9981808,0.000064317384,0.00011886117,0.0003519592,0.0000036449333,0.00012806564,0.0006160661],"genre_scores_gemma":[0.04944594,0.000025855388,0.9497933,0.000019058989,0.00001628754,0.00065502495,0.000005764729,0.00001634388,0.000022465942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994613,0.00008619738,0.00018736269,0.00013507975,0.00001930012,0.000110794295],"domain_scores_gemma":[0.99969065,0.00006590043,0.00004167076,0.00014515812,0.00004584677,0.000010749512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005869101,0.00007380156,0.00011866679,0.00013110766,0.000016711821,0.0000027126077,0.0000623274,0.00012335,0.0000071215018],"category_scores_gemma":[0.000043362645,0.000058672038,0.000043810775,0.00014249237,0.000034872617,0.000024047778,0.000013888358,0.000057029793,3.1911938e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038454136,0.00001086913,0.0000975443,0.0000281613,0.000006103204,5.423581e-8,0.0000019813554,0.000035993853,0.91662633,0.0064572208,0.00003668425,0.07669523],"study_design_scores_gemma":[0.00013680343,0.00008521305,0.00013421336,0.000022495893,0.000009252041,0.00000303166,0.0000021399928,0.0015523944,0.9353288,0.0584601,0.004191852,0.00007371616],"about_ca_topic_score_codex":0.000004836817,"about_ca_topic_score_gemma":9.56001e-7,"teacher_disagreement_score":0.07662152,"about_ca_system_score_codex":0.00005925029,"about_ca_system_score_gemma":0.000011905066,"threshold_uncertainty_score":0.23925763},"labels":[],"label_agreement":null},{"id":"W2407806081","doi":"10.1007/978-1-4939-0777-9_4","title":"Neurite Outgrowth and Growth Cone Collapse Assays to Assess Neuronal Responses to Extracellular Cues","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital","funders":"Canadian Institutes of Health Research","keywords":"Neurite; Growth cone; Neuroscience; Regeneration (biology); Dorsal root ganglion; Inhibitory postsynaptic potential; Biology; Extracellular; Semaphorin; Cell biology; In vitro; Axon; Spinal cord; Receptor; Biochemistry","score_opus":0.06235573441042157,"score_gpt":0.3996829382645693,"score_spread":0.3373272038541477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407806081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5034175,0.00006300105,0.49425486,0.001481428,0.00029982498,0.00024011212,0.000009106601,0.00003134509,0.00020286071],"genre_scores_gemma":[0.5863822,0.000017353248,0.40797126,0.004957377,0.00008840895,0.00007673092,0.0000032877124,0.000031535383,0.00047181337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99179333,0.006545098,0.0003492002,0.0007926102,0.00012882044,0.0003909488],"domain_scores_gemma":[0.9981142,0.0012357605,0.00007359996,0.00033301557,0.000054929347,0.00018843866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021637536,0.00022329277,0.0003360248,0.00034279318,0.000112797774,0.000059389364,0.00029971948,0.00016728701,0.000013108069],"category_scores_gemma":[0.0062608295,0.00020344835,0.000052931955,0.0004967055,0.0001619072,0.000055497938,0.00022242668,0.0002241659,0.00001462706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014545338,0.000042346008,0.002543475,0.000009784984,0.0000025005315,0.000040484916,0.0000624121,0.000050692674,0.95979637,0.033474285,0.00005185842,0.0037803436],"study_design_scores_gemma":[0.00029765908,0.0006064439,0.002662928,0.000009701647,0.000008130429,0.000036982834,0.000006259488,0.0005060854,0.9853322,0.0058508283,0.0044411733,0.00024161684],"about_ca_topic_score_codex":0.0000189986,"about_ca_topic_score_gemma":0.0000099075505,"teacher_disagreement_score":0.08628359,"about_ca_system_score_codex":0.000019916568,"about_ca_system_score_gemma":0.000033218323,"threshold_uncertainty_score":0.82963824},"labels":[],"label_agreement":null},{"id":"W2407852863","doi":"10.1007/978-1-59745-551-0_10","title":"PDMS Microfluidic Capillary Systems for Patterning Proteins on Surfaces and Performing Miniaturized Immunoassays","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Polydimethylsiloxane; Microfluidics; Capillary action; Microchannel; Materials science; Nanotechnology; Soft lithography; Fabrication; Adhesion; Substrate (aquarium); Fluidics; Composite material; Engineering","score_opus":0.0096602163253747,"score_gpt":0.29348456974493614,"score_spread":0.2838243534195614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407852863","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61495215,0.06492095,0.31890997,0.000044074786,0.0002910592,0.00066488597,0.000013207418,0.000069167065,0.00013452164],"genre_scores_gemma":[0.41495645,0.0722973,0.5096798,0.00028148436,0.00023096874,0.002046463,0.00016719624,0.00023091932,0.000109441375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987029,0.00021770729,0.0003196445,0.00032893,0.000046545927,0.00038427938],"domain_scores_gemma":[0.9993178,0.00022760902,0.000049251044,0.00031992522,0.000031184307,0.00005417888],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009252208,0.00022270274,0.0003331258,0.00015052818,0.00009216527,0.00002791236,0.00018491171,0.0002893734,0.000010800424],"category_scores_gemma":[0.00009002097,0.0002090961,0.000061804174,0.00013082603,0.00007775528,0.00002096654,0.000039493836,0.00038568673,0.000002976438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014559502,0.000012440375,0.00019161036,0.00007659839,0.000036432386,0.000002559876,0.000085742846,0.000013157057,0.9939121,0.0016986543,0.0003238243,0.0036323231],"study_design_scores_gemma":[0.00047000338,0.00011398161,0.00015932384,0.000026905744,0.000017960272,0.000031986765,0.000052078078,0.0018074949,0.94583815,0.00057430967,0.050635125,0.0002726482],"about_ca_topic_score_codex":0.000040377046,"about_ca_topic_score_gemma":0.0000016613003,"teacher_disagreement_score":0.19999571,"about_ca_system_score_codex":0.000030356434,"about_ca_system_score_gemma":0.000020725505,"threshold_uncertainty_score":0.8526692},"labels":[],"label_agreement":null},{"id":"W2407927703","doi":"10.1007/978-1-60327-469-2_23","title":"Detection of Nuclear β-catenin in Xenopus Embryos","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Xenopus; Embryo; Wnt signaling pathway; Cell biology; Biology; Fixation (population genetics); Immunofluorescence; Nucleus; Scope (computer science); Computational biology; Computer science; Signal transduction; Biochemistry; Genetics; Antibody","score_opus":0.019013817013147916,"score_gpt":0.33168086534316266,"score_spread":0.31266704833001474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407927703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8445555,0.0012573238,0.15301539,0.00004139453,0.00023032071,0.00015977604,0.0000023722303,0.000010708547,0.000727218],"genre_scores_gemma":[0.79709196,0.0002616327,0.20223475,0.00017972165,0.000037610924,0.00003264929,0.000019933417,0.000027380647,0.00011433502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982792,0.00054546614,0.00040253092,0.0004087467,0.00006776784,0.00029627726],"domain_scores_gemma":[0.9995129,0.000026564529,0.00011242161,0.00025550617,0.000054025353,0.000038575476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006849916,0.00016927643,0.0002827609,0.00019345683,0.000032026033,0.0000026719733,0.00024456246,0.00033150695,0.000028261453],"category_scores_gemma":[0.00020866288,0.0001718492,0.00008801269,0.000297362,0.00019288335,0.000002499123,0.00012161192,0.00016584939,0.000004513122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108281834,0.00004726945,0.0058462895,0.0000101815795,0.000023623239,0.000016755299,0.00008611082,0.00008936954,0.9880613,0.00011372161,0.000029839339,0.005567262],"study_design_scores_gemma":[0.0006557862,0.00020952927,0.0035402037,0.000011874434,0.0000052823925,0.000033725744,0.000032111286,0.00007150724,0.98958486,0.0006345798,0.005017997,0.00020251062],"about_ca_topic_score_codex":0.00007856071,"about_ca_topic_score_gemma":0.000025497251,"teacher_disagreement_score":0.04921936,"about_ca_system_score_codex":0.000030742467,"about_ca_system_score_gemma":0.00006483823,"threshold_uncertainty_score":0.7007807},"labels":[],"label_agreement":null},{"id":"W2407944323","doi":"10.1007/978-1-60327-164-6_25","title":"Generalized Transduction by Lytic Bacteriophages","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Queen's University; Public Health Agency of Canada","funders":"","keywords":"Lytic cycle; Transduction (biophysics); Virulence; Microbiology; Biology; Bacteriophage; Escherichia coli; Bacteria; Temperateness; Virology; Virus; Genetics; Gene; Biochemistry","score_opus":0.011882188607844355,"score_gpt":0.3517295326403323,"score_spread":0.33984734403248795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2407944323","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43463174,0.0001677484,0.5609955,0.0009867881,0.00026674822,0.00014992274,0.0000068589434,0.000034574525,0.0027601132],"genre_scores_gemma":[0.17130448,0.00010175262,0.82539696,0.002112294,0.000030792813,0.000018415221,0.000038376158,0.000015128538,0.0009818305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987509,0.00046433392,0.00020732086,0.00030314783,0.000030262565,0.00024402924],"domain_scores_gemma":[0.9996991,0.000023561091,0.000045771416,0.00018217186,0.0000033052047,0.000046056124],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0002974015,0.00012474712,0.00017209828,0.00004227281,0.000040383824,0.000014191233,0.00014675352,0.00012006685,0.0022376408],"category_scores_gemma":[0.00003097361,0.000117005824,0.000071507005,0.00017399671,0.00008798783,0.00006374829,0.000028397344,0.00014279828,0.000057599995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011558832,0.000049156526,0.00008213369,7.288612e-7,0.000003998537,0.000004813361,0.000049570597,0.000022414848,0.94939584,0.0001236015,0.00021921532,0.050036974],"study_design_scores_gemma":[0.00037977938,0.00015365804,0.009276286,0.000004173644,0.000012277519,0.000036344456,0.000010095201,0.000094453026,0.93858653,0.0028145658,0.048431277,0.00020057477],"about_ca_topic_score_codex":0.00018574817,"about_ca_topic_score_gemma":0.000015618029,"teacher_disagreement_score":0.26440144,"about_ca_system_score_codex":0.00007873039,"about_ca_system_score_gemma":0.0000032702603,"threshold_uncertainty_score":0.99867445},"labels":[],"label_agreement":null},{"id":"W2408029497","doi":"10.1007/978-1-4939-0888-2_6","title":"The Greatwall–PP2A Axis in Cell Cycle Control","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Protein phosphatase 2; Mitosis; Cell biology; Cyclin-dependent kinase 1; Biology; Mitotic exit; Polo-like kinase; Cell cycle; Phosphatase; Phosphorylation; Cell; Biochemistry","score_opus":0.0061854796568542115,"score_gpt":0.3149029715484056,"score_spread":0.30871749189155134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408029497","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17609957,0.0018189178,0.8183505,0.0003978715,0.00024440285,0.000292969,0.0000066786515,0.000010157302,0.0027789457],"genre_scores_gemma":[0.8121951,0.00039189885,0.18446815,0.0022397828,0.00012309682,0.00013677767,0.000051724546,0.00004893206,0.00034449145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99695367,0.0016836064,0.0003563237,0.00047956957,0.00004977572,0.00047704004],"domain_scores_gemma":[0.9990513,0.0001620868,0.00009014686,0.0006028818,0.00003818689,0.000055428798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017543281,0.00020652151,0.00026718734,0.000079441976,0.00006342224,0.000017452503,0.0004328672,0.00034632083,0.0000065361955],"category_scores_gemma":[0.00043650073,0.0001626416,0.00011083006,0.00014534994,0.00016879612,0.0000015554132,0.00014750291,0.00022613736,0.000007885263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059036567,0.00004702508,0.0040444233,0.0000063040607,0.000014726889,0.0000039198476,0.000018523375,0.0001908772,0.9756051,0.002013262,0.000045117715,0.017951738],"study_design_scores_gemma":[0.0029697116,0.0005787918,0.0020457043,0.000012863664,0.00002352544,0.000019562494,0.000051593557,0.0032458168,0.8488306,0.012640866,0.12904464,0.00053633173],"about_ca_topic_score_codex":0.000102591715,"about_ca_topic_score_gemma":0.00022763936,"teacher_disagreement_score":0.6360956,"about_ca_system_score_codex":0.000022433447,"about_ca_system_score_gemma":0.000039714865,"threshold_uncertainty_score":0.6632332},"labels":[],"label_agreement":null},{"id":"W2408078942","doi":"10.1007/978-1-4939-2877-4_16","title":"Detection of Short-Range DNA Interactions in Mammalian Cells Using High-Resolution Circular Chromosome Conformation Capture Coupled to Deep Sequencing","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canada Research Chairs; École Polytechnique Fédérale de Lausanne","keywords":"Chromosome conformation capture; DNA; Biology; Circular bacterial chromosome; Computational biology; Chromosome; Gene; DNA sequencing; High resolution; Genome; Genetics; Deep sequencing; Gene expression","score_opus":0.028745709124667895,"score_gpt":0.33088840634655264,"score_spread":0.30214269722188475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408078942","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5160268,0.00017440683,0.48333284,0.000014200276,0.00021693703,0.00019380523,0.00000773931,0.0000042638735,0.00002898433],"genre_scores_gemma":[0.7768926,0.000014276317,0.22283155,0.000088113906,0.00003508747,0.000025711191,0.00008803061,0.000019862808,0.0000047809617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982692,0.00049951096,0.0005131422,0.0003436158,0.0000811404,0.00029340532],"domain_scores_gemma":[0.9992755,0.000019076271,0.0001456996,0.00033553928,0.00013397058,0.00009019502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092779944,0.00018863996,0.0002924818,0.0002711497,0.000030344178,0.00000964027,0.0001795988,0.00026380282,0.0000041544977],"category_scores_gemma":[0.00018604226,0.00020924663,0.00007817839,0.00029421874,0.000060357954,0.000008794897,0.00011634466,0.00016981355,0.0000016686586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042615244,0.000026512651,0.0004253373,0.000023595041,0.000019971438,0.0000059277495,0.00023896167,0.038694244,0.9594402,0.000060424427,9.86275e-7,0.0010212521],"study_design_scores_gemma":[0.00050366425,0.00017670692,0.0004269348,0.000021695838,0.000020493,0.00003605206,0.00041459137,0.10266083,0.89478225,0.00049027306,0.00023037614,0.00023614503],"about_ca_topic_score_codex":0.0008486195,"about_ca_topic_score_gemma":0.00085643487,"teacher_disagreement_score":0.26086578,"about_ca_system_score_codex":0.0002758522,"about_ca_system_score_gemma":0.00010346445,"threshold_uncertainty_score":0.85328305},"labels":[],"label_agreement":null},{"id":"W2408165627","doi":"10.1007/978-1-62703-176-9_22","title":"Single Particle Electron Microscopy","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Electron microscope; Single particle analysis; Particle (ecology); Microscopy; Context (archaeology); Nanotechnology; Field (mathematics); Materials science; Computer science; Chemistry; Physics; Optics; Geography; Mathematics; Biology","score_opus":0.016016935349494048,"score_gpt":0.4458200045432387,"score_spread":0.42980306919374467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408165627","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2635335,0.0028157565,0.73283637,0.00009241247,0.00005491648,0.00016621813,0.0000032167286,0.000024621408,0.00047299135],"genre_scores_gemma":[0.2637894,0.00010674872,0.7351037,0.0005726734,0.000079018195,0.000113437185,0.000049561313,0.000028790926,0.0001566566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847686,0.0003088684,0.00022489266,0.0003244523,0.000031833377,0.0006330972],"domain_scores_gemma":[0.9994108,0.000019738558,0.00006526934,0.00039494253,0.000027118704,0.00008210296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050451997,0.00016202159,0.00016409357,0.000041939216,0.000046191606,0.000007628901,0.00019549395,0.00020202957,0.000016064647],"category_scores_gemma":[0.00009489135,0.00016443303,0.00007105214,0.0001890391,0.00010675254,0.000003978939,0.00010458452,0.00014457539,0.000008184094],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021173215,0.00012833407,0.003237633,0.0000026513478,0.000009840978,3.251109e-7,0.000012952566,0.0000051444326,0.98662746,0.0044052517,0.00008634499,0.005462914],"study_design_scores_gemma":[0.00016762562,0.00021889493,0.00012626192,0.0000022371048,0.000006118716,0.000012483324,0.000007411331,0.000007442812,0.90486425,0.0020005908,0.092414476,0.00017219211],"about_ca_topic_score_codex":0.00000841849,"about_ca_topic_score_gemma":0.0000044889684,"teacher_disagreement_score":0.09232813,"about_ca_system_score_codex":0.000036494497,"about_ca_system_score_gemma":0.000022376784,"threshold_uncertainty_score":0.6705385},"labels":[],"label_agreement":null},{"id":"W2408242470","doi":"10.1007/978-1-62703-281-0_1","title":"Array Comparative Genomic Hybridization: An Overview of Protocols, Applications, and Technology Trends","year":2013,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Comparative genomic hybridization; Computer science; Data science; High resolution; Computational biology; Biology; Genome; Geography; Genetics; Remote sensing","score_opus":0.05552853833771788,"score_gpt":0.3924939478342159,"score_spread":0.336965409496498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408242470","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034430625,0.038190886,0.82840466,0.00037157282,0.00017413865,0.012785277,0.0005112081,0.000073374606,0.11604579],"genre_scores_gemma":[0.00412821,0.0020415732,0.9498228,0.00021425809,0.00020562275,0.008359839,0.0017278646,0.0001231671,0.03337667],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982208,0.0002554381,0.00060842925,0.0006391839,0.000054311982,0.0002218205],"domain_scores_gemma":[0.9986664,0.000020211659,0.00040160315,0.00068171043,0.00017091732,0.00005913673],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003419071,0.00034438848,0.0006223398,0.00035468343,0.000048598024,0.000013704714,0.00033862953,0.00070562476,0.00015617986],"category_scores_gemma":[0.000017907247,0.00034678882,0.00008715057,0.0001030226,0.0003703829,0.000003988513,0.00019133152,0.00021463384,0.0000060313437],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019896865,0.000050705967,0.0002519641,0.00009798014,0.00013214674,0.0000013576208,0.00004277511,0.000015747713,0.73767704,0.24131364,0.00004669272,0.020350069],"study_design_scores_gemma":[0.0008116078,0.0010472457,0.00016360034,0.0000930213,0.000092626,0.00008046981,0.00008195625,0.000030033012,0.31071728,0.09035155,0.5956987,0.0008319072],"about_ca_topic_score_codex":0.000013613772,"about_ca_topic_score_gemma":0.00001609198,"teacher_disagreement_score":0.595652,"about_ca_system_score_codex":0.000027788947,"about_ca_system_score_gemma":0.00011144509,"threshold_uncertainty_score":0.99989843},"labels":[],"label_agreement":null},{"id":"W2408255659","doi":"10.1007/978-1-61737-988-8_21","title":"Genetic Transformation Protocols Using Zygotic Embryos as Explants: An Overview","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Explant culture; Transformation (genetics); Biology; Zygote; Embryo; Selection (genetic algorithm); Genome; Maternal to zygotic transition; Computational biology; Gene; Botany; Genetics; Embryogenesis; Computer science; In vitro; Artificial intelligence","score_opus":0.12926179765650667,"score_gpt":0.4958549601246845,"score_spread":0.36659316246817786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408255659","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013049084,0.8207735,0.17241889,0.000006823215,0.00025393936,0.006222358,0.000049905462,0.000017401502,0.00012668845],"genre_scores_gemma":[0.0000010111568,0.7636571,0.23181318,0.00011599787,0.000275194,0.0026598459,0.0013445687,0.00006817231,0.00006491804],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99532515,0.0024186836,0.0008717202,0.0008310312,0.00010447603,0.00044894018],"domain_scores_gemma":[0.99864143,0.000028126142,0.00036011077,0.00077674544,0.00006867669,0.0001249285],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00085546623,0.0005836389,0.0012022186,0.00022007283,0.00008566347,0.000043058906,0.0005500651,0.0017856834,0.000028273604],"category_scores_gemma":[0.00017389633,0.0004717466,0.00035395424,0.00023951104,0.00011064159,0.000008592733,0.000090369074,0.0005352025,0.000014474469],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011493288,0.00006317014,0.0000027227845,0.0015948053,0.00006504523,0.000020004576,0.00003234271,0.000018464707,0.38520458,0.0003085971,0.000010215439,0.6126686],"study_design_scores_gemma":[0.00028700664,0.00030798407,9.598958e-7,0.0011962818,0.00022312326,0.00069985475,0.000007638208,0.00007048008,0.026923273,0.000260372,0.96941465,0.00060835446],"about_ca_topic_score_codex":0.000086900196,"about_ca_topic_score_gemma":0.0001694263,"teacher_disagreement_score":0.96940446,"about_ca_system_score_codex":0.000046239216,"about_ca_system_score_gemma":0.00048716227,"threshold_uncertainty_score":0.99977344},"labels":[],"label_agreement":null},{"id":"W2408319959","doi":"10.1007/978-1-61779-870-2_8","title":"Preparation of Normalized cDNA Libraries for 454 Titanium Transcriptome Sequencing","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Lilly Endowment","keywords":"Biology; DNA sequencing; Pyrosequencing; Transcriptome; Eukaryote; Computational biology; Genomics; cDNA library; Single cell sequencing; Genetics; Complementary DNA; Gene; Evolutionary biology; Genome; Exome sequencing; Gene expression; Mutation","score_opus":0.03485635667858032,"score_gpt":0.3875065932669505,"score_spread":0.3526502365883702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408319959","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36713168,0.0052357567,0.6263103,0.00003641749,0.00027648528,0.0002890195,0.000024414681,0.0000031459049,0.0006927759],"genre_scores_gemma":[0.47386616,0.00009655867,0.5256875,0.000102260106,0.0000748377,0.00007419347,0.000040187613,0.00001560722,0.000042706033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987353,0.00034103208,0.00032179515,0.0002447862,0.000035413992,0.00032168924],"domain_scores_gemma":[0.9994868,0.000057587855,0.00010252218,0.0002517928,0.00005710584,0.00004417867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079282286,0.00015010788,0.0002694077,0.000068667876,0.000036217476,0.0000053421827,0.00015223447,0.00020060377,0.0000059872777],"category_scores_gemma":[0.00019522329,0.00014366474,0.00012703615,0.00008973298,0.00011582927,0.0000019697009,0.00007095105,0.0000520639,4.7945537e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012301389,0.000028848302,0.0041759494,0.000030680632,0.000070017566,1.7612604e-7,0.00025385903,0.000046444635,0.98842686,0.0053882604,0.000023073726,0.0014327911],"study_design_scores_gemma":[0.000506151,0.0003200794,0.0007849132,0.000004842964,0.000027563252,0.000004838886,0.00009631738,0.00006569976,0.9836835,0.0027087727,0.011634705,0.0001625994],"about_ca_topic_score_codex":0.000013356727,"about_ca_topic_score_gemma":0.0000065597646,"teacher_disagreement_score":0.106734484,"about_ca_system_score_codex":0.000013492137,"about_ca_system_score_gemma":0.000054215536,"threshold_uncertainty_score":0.58584785},"labels":[],"label_agreement":null},{"id":"W2408419511","doi":"10.1007/978-1-62703-113-4_6","title":"Native RNA Purification by Gel Filtration Chromatography","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Manitoba Health Research Council","keywords":"RNA; T7 RNA polymerase; Fast protein liquid chromatography; Size-exclusion chromatography; RNA extraction; Transcription (linguistics); DNA; RNA-dependent RNA polymerase; Chemistry; Recombinant DNA; In vitro; Polymerase; RNA polymerase; Molecular biology; Chromatography; Biology; Computational biology; Biochemistry; High-performance liquid chromatography; Gene; Enzyme; Bacteriophage; Escherichia coli","score_opus":0.020383067495922422,"score_gpt":0.3904240295783079,"score_spread":0.37004096208238546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408419511","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3374411,0.0028249733,0.65814364,0.00010959922,0.000099284625,0.00018327551,0.000009452253,0.000009706573,0.0011789722],"genre_scores_gemma":[0.4931009,0.00031519937,0.5050144,0.00049187534,0.0001344343,0.00015049856,0.00042113144,0.000032191238,0.00033934074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997917,0.0010043153,0.00023185308,0.00031889664,0.00007895412,0.00044901134],"domain_scores_gemma":[0.999402,0.00004352899,0.000078836085,0.0003133536,0.000055883447,0.00010643319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012608118,0.00014824365,0.0001603014,0.00013166934,0.00005357105,0.000012655095,0.00020149659,0.00025243068,0.000021500022],"category_scores_gemma":[0.00040875905,0.00014118614,0.0000860069,0.00024138734,0.00012217156,0.000006706374,0.00007101571,0.00015644872,0.0000059068643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024567258,0.00006667676,0.0053498656,0.000006186968,0.000030429037,6.5483323e-7,0.000031130643,0.0000035115106,0.981665,0.0012520734,0.00041498433,0.011154903],"study_design_scores_gemma":[0.00028983265,0.0001538551,0.0014358058,0.000004083931,0.000005354717,0.0000066376633,0.000043497916,0.00009406885,0.98361564,0.00053798,0.013649382,0.00016387804],"about_ca_topic_score_codex":0.000040491712,"about_ca_topic_score_gemma":0.0000048679744,"teacher_disagreement_score":0.15565981,"about_ca_system_score_codex":0.000019962466,"about_ca_system_score_gemma":0.000030395087,"threshold_uncertainty_score":0.5757404},"labels":[],"label_agreement":null},{"id":"W2408531387","doi":"10.1007/978-1-60327-469-2_11","title":"Visualization of PCP Defects in the Eye and Wing of Drosophila melanogaster","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"","keywords":"Drosophila melanogaster; Wing; Drosophila (subgenus); Biology; Visualization; Neuroscience; Evolutionary biology; Optometry; Computational biology; Computer science; Genetics; Medicine; Artificial intelligence; Engineering; Aerospace engineering","score_opus":0.018446681283222004,"score_gpt":0.36144864266482246,"score_spread":0.34300196138160044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408531387","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9223791,0.0010001621,0.07609864,0.00003350044,0.000044162785,0.00013184387,0.0000017477855,0.0000014420716,0.00030943772],"genre_scores_gemma":[0.9401183,0.00016101646,0.059480257,0.00014573745,0.000011146034,0.000010799096,0.00005118845,0.000006032226,0.000015486869],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985651,0.0008160088,0.0002578603,0.0002024345,0.000036942347,0.00012168147],"domain_scores_gemma":[0.999672,0.000044908098,0.00009319945,0.00015198354,0.000026066855,0.000011823182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007661276,0.00009044383,0.0001720168,0.00009348856,0.000020532276,9.772804e-7,0.00010663438,0.0001955975,0.0000021946398],"category_scores_gemma":[0.00015286426,0.000071058865,0.000036911748,0.00015770552,0.00022109314,0.000001921267,0.00007012389,0.00005228733,1.9185723e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034531004,0.000027131695,0.14361756,0.000011411478,0.000011025104,0.0000026232606,0.0001609647,0.000024396904,0.8537688,0.0007443293,0.0000020571924,0.0015951318],"study_design_scores_gemma":[0.0003937639,0.00018865232,0.16851428,0.000010977254,0.000004526432,0.000023814744,0.000039921055,0.000033951,0.8289174,0.0013973747,0.000396081,0.000079254336],"about_ca_topic_score_codex":0.000009375708,"about_ca_topic_score_gemma":0.000010587766,"teacher_disagreement_score":0.024896715,"about_ca_system_score_codex":0.0000044753165,"about_ca_system_score_gemma":0.000023990131,"threshold_uncertainty_score":0.28976962},"labels":[],"label_agreement":null},{"id":"W2408661498","doi":"10.1007/978-1-60761-854-6_16","title":"Computing Chromosome Conformation","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Chromatin; Chromosome conformation capture; Computational biology; Physical mapping; Genome; Chromosome; Gene; DNA; Biology; Interpretation (philosophy); Computer science; Genetics; Gene mapping","score_opus":0.008552132842596427,"score_gpt":0.34072880270486605,"score_spread":0.3321766698622696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408661498","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5107923,0.00009392253,0.48715797,0.00004575638,0.00031279196,0.00009353382,0.000004082165,0.00000872359,0.0014909299],"genre_scores_gemma":[0.4255061,0.000020553724,0.57393366,0.00029795224,0.00007489332,0.000007588725,0.000114185335,0.000015928976,0.00002913767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887323,0.00022172714,0.00029512518,0.00029355183,0.000039109615,0.00027723314],"domain_scores_gemma":[0.99939877,0.000025733878,0.00010275255,0.00037332866,0.000047228557,0.00005219196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008018196,0.00014724863,0.00017296754,0.00007806118,0.000044571298,0.00001155505,0.0002573433,0.00030804472,0.000023084565],"category_scores_gemma":[0.00022387103,0.0001492239,0.000072593575,0.00010059892,0.000106310144,0.0000017703071,0.00017452402,0.00024043479,0.0000074997606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000064659685,0.000020509327,0.0017787953,0.0000070678834,0.000013111037,0.0000022671852,0.000030117604,0.00011254892,0.9813703,0.0035076484,0.000016722577,0.0131344665],"study_design_scores_gemma":[0.0007718609,0.00020292256,0.002235466,0.000006372673,0.000009763745,0.000079259116,0.0000505731,0.010156393,0.95937717,0.005838541,0.020871757,0.000399939],"about_ca_topic_score_codex":0.000014238751,"about_ca_topic_score_gemma":0.000034038745,"teacher_disagreement_score":0.086775705,"about_ca_system_score_codex":0.000009231287,"about_ca_system_score_gemma":0.000047613637,"threshold_uncertainty_score":0.6085174},"labels":[],"label_agreement":null},{"id":"W2408701418","doi":"10.1007/978-1-61779-160-4_2","title":"Imaging-Based Approaches to Understanding G Protein-Coupled Receptor Signalling Complexes","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Signalling; Förster resonance energy transfer; Signalling pathways; Computational biology; Receptor; Bimolecular fluorescence complementation; Chemistry; Cell biology; Biology; Biochemistry; Physics; Gene","score_opus":0.15367578993060182,"score_gpt":0.33997779379336207,"score_spread":0.18630200386276025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408701418","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.053811383,0.00045312516,0.94413453,0.00015595017,0.00018212832,0.00059065776,0.000006555052,0.000031436623,0.0006342025],"genre_scores_gemma":[0.3635796,0.000002813296,0.63577235,0.0003600428,0.000051753672,0.00011647361,0.00004837199,0.0000423987,0.000026236377],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99732375,0.0008319332,0.0004207902,0.0007692053,0.000096111784,0.00055823114],"domain_scores_gemma":[0.99925506,0.00003877692,0.00012323441,0.0004038905,0.000035012235,0.0001439957],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015662451,0.00031278914,0.00036043557,0.00022595997,0.000093342926,0.000024522644,0.00040449668,0.0002457407,0.0002095509],"category_scores_gemma":[0.00020918141,0.0003046882,0.00016029802,0.00026453103,0.0001207187,0.0000038067162,0.00016361558,0.00019316566,0.00000861459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014133309,0.00006772302,0.0004924379,0.000017437731,0.000035629786,0.0000067333276,0.0001109041,0.00031130685,0.98356247,0.013901201,0.000009356613,0.0013434661],"study_design_scores_gemma":[0.0004944873,0.00033708144,0.000015041552,0.000033742414,0.000011893278,0.000003686238,0.0001919525,0.0026816756,0.9812875,0.013795637,0.00074918283,0.00039815585],"about_ca_topic_score_codex":0.000059001308,"about_ca_topic_score_gemma":0.000014638698,"teacher_disagreement_score":0.3097682,"about_ca_system_score_codex":0.00006592795,"about_ca_system_score_gemma":0.00007770917,"threshold_uncertainty_score":0.9999405},"labels":[],"label_agreement":null},{"id":"W2408768217","doi":"10.1007/978-1-4939-0473-0_33","title":"Mining the Pseudomonas Genome","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Cystic Fibrosis Foundation Therapeutics; Michael Smith Health Research BC; Cystic Fibrosis Foundation","keywords":"Genome; Biology; Pseudomonas; Gene; Computational biology; Genetics; Pseudomonas aeruginosa; Genomics; Identification (biology); Bacteria","score_opus":0.019468462263227283,"score_gpt":0.3440474224799876,"score_spread":0.3245789602167603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408768217","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4043051,0.0031267176,0.58808446,0.00040902488,0.00025118524,0.00016168761,0.0000032821026,0.0000040072196,0.0036545151],"genre_scores_gemma":[0.43736273,0.00019132809,0.56037456,0.0015979642,0.00019679949,0.00006559735,0.00001849603,0.00002978769,0.00016273324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980525,0.0009217201,0.00024183873,0.00040733934,0.00004289655,0.000333746],"domain_scores_gemma":[0.99924654,0.000097804455,0.0000715226,0.00050595694,0.00003752922,0.00004064028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013505446,0.00017382625,0.00020910491,0.000049756505,0.000080984624,0.0000114115755,0.0003736227,0.0001672452,0.000007826305],"category_scores_gemma":[0.00038599165,0.00012891108,0.00010095951,0.000112596885,0.0001930254,2.251367e-7,0.00028382448,0.00010519587,0.0000042969564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013194565,0.000013441438,0.002883651,0.0000030238127,0.000039216717,0.0000011707319,0.00006089835,0.00014424678,0.9831442,0.0018473624,0.000025478254,0.0118241],"study_design_scores_gemma":[0.0007890678,0.000525208,0.010509869,0.000005432464,0.000032334792,0.000038045044,0.00014950924,0.00026720273,0.57730985,0.01134148,0.3985449,0.0004871078],"about_ca_topic_score_codex":0.000013911142,"about_ca_topic_score_gemma":0.000019385112,"teacher_disagreement_score":0.4058344,"about_ca_system_score_codex":0.000008133938,"about_ca_system_score_gemma":0.0000228612,"threshold_uncertainty_score":0.5256842},"labels":[],"label_agreement":null},{"id":"W2408830249","doi":"10.1007/978-1-61779-968-6_14","title":"Isolation and Characterization of Clostridium difficile Toxin-Specific Single-Domain Antibodies","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Guelph; Carleton University; National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Phage display; Single-domain antibody; Toxin; Epitope; Clostridium difficile; Antibody; Biology; Microbiology; Recombinant DNA; Epitope mapping; Conformational epitope; Clostridium difficile toxin A; Enterotoxin; Virology; Computational biology; Escherichia coli; Gene; Biochemistry; Immunology; Antibiotics","score_opus":0.042335956191165335,"score_gpt":0.3752900024279041,"score_spread":0.3329540462367388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408830249","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8211888,0.0015443176,0.17585969,0.00029537285,0.00016175523,0.00030980128,0.00001535385,0.000019835943,0.0006050541],"genre_scores_gemma":[0.79097354,0.00051732245,0.2080719,0.000073015035,0.00014098344,0.000017916922,0.00012817384,0.000027482727,0.000049679475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824417,0.0004433783,0.00045020008,0.00029231154,0.00013528616,0.00043468576],"domain_scores_gemma":[0.99919295,0.00017814805,0.00012478342,0.00029414156,0.000093199356,0.000116782685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009681063,0.00018190149,0.0004617037,0.0003406156,0.000037469996,0.000008927274,0.00007692579,0.00023460593,0.00007421062],"category_scores_gemma":[0.00022372804,0.00016624674,0.00008038572,0.0003946029,0.00021227726,0.000050803774,0.00010914377,0.0002367725,0.0000046365353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015858682,0.00028668414,0.014774789,0.00006189863,0.0000273233,0.0000065527365,0.00020895214,3.4573924e-7,0.9656004,0.0017917906,0.0000070456686,0.017075678],"study_design_scores_gemma":[0.00076728774,0.0003395633,0.010938661,0.000044276712,0.00002145171,0.000039707247,0.000105619096,0.000060877046,0.9841996,0.00021595886,0.0031241204,0.0001429053],"about_ca_topic_score_codex":0.000012256018,"about_ca_topic_score_gemma":8.206696e-7,"teacher_disagreement_score":0.032212213,"about_ca_system_score_codex":0.00007794858,"about_ca_system_score_gemma":0.000033374326,"threshold_uncertainty_score":0.6779345},"labels":[],"label_agreement":null},{"id":"W2408832334","doi":"10.1007/978-1-4939-3393-8_5","title":"From Plant Extract to a cDNA Encoding a Glucosyltransferase Candidate: Proteomics and Transcriptomics as Tools to Help Elucidate Saponin Biosynthesis in Centella asiatica","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Medicinal Plants and Neuroprotection","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"","keywords":"Glucosyltransferase; Centella; Transcriptome; Saponin; Biology; Computational biology; Biosynthesis; Complementary DNA; Botany; Gene; Genetics; Gene expression; Medicine","score_opus":0.029924635889646597,"score_gpt":0.3594793222153511,"score_spread":0.3295546863257045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408832334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.599084,0.00008365835,0.39690953,0.0026665318,0.00011021953,0.0009410142,0.000104831335,0.00001757118,0.00008263976],"genre_scores_gemma":[0.638691,0.00035159444,0.35841453,0.00222504,0.000079460006,0.00014985692,0.00002532452,0.00003949424,0.00002369217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974378,0.0008243349,0.00050228223,0.0006607291,0.00012098882,0.0004538914],"domain_scores_gemma":[0.99878865,0.00053948205,0.00005189157,0.0003104564,0.000023684575,0.0002858385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012203918,0.00025879018,0.0006025191,0.00045382034,0.00003217646,0.000017591723,0.0001315048,0.00022619571,0.000076033546],"category_scores_gemma":[0.001855518,0.00018234552,0.00005913159,0.00029281582,0.00005806673,0.000037565354,0.000038337465,0.00027637818,0.000012678657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016755377,0.000067696055,0.0012123921,0.000028528939,0.000028298611,0.0004093697,0.00048279105,0.000001062267,0.90177757,0.000115834126,0.000004997987,0.09419592],"study_design_scores_gemma":[0.001558592,0.0008323272,0.002257829,0.0005326516,0.00004557972,0.00016649588,0.00010268947,0.00010385782,0.99143726,0.00071903487,0.0020057177,0.00023797323],"about_ca_topic_score_codex":0.0008494109,"about_ca_topic_score_gemma":0.00017781653,"teacher_disagreement_score":0.093957946,"about_ca_system_score_codex":0.00010793504,"about_ca_system_score_gemma":0.00007890951,"threshold_uncertainty_score":0.74358344},"labels":[],"label_agreement":null},{"id":"W2408840396","doi":"10.1007/978-1-61779-867-2_15","title":"Assessment of Xenobiotic Biotransformation Including Reactive Oxygen Species Generation in the Embryo Using Benzene as an Example","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carcinogens and Genotoxicity Assessment","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biotransformation; Xenobiotic; Reactive oxygen species; Benzene; Chemistry; Environmental chemistry; Embryo; Oxygen; Biology; Biochemistry; Organic chemistry; Cell biology; Enzyme","score_opus":0.10659853960037796,"score_gpt":0.43769253762530247,"score_spread":0.3310939980249245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408840396","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61411786,0.00024417372,0.38491407,0.000030127925,0.00008661929,0.00024762095,0.000005964985,0.0000021154856,0.00035144243],"genre_scores_gemma":[0.7540509,0.00004992364,0.24537802,0.00018528922,0.0000900041,0.00002022294,0.00021022605,0.000011804646,0.000003613955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972661,0.0015980613,0.0003997131,0.00029477957,0.0001124081,0.0003289441],"domain_scores_gemma":[0.999332,0.00004353841,0.00014528846,0.00037933004,0.00005694089,0.000042903095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026444343,0.00017080225,0.00024295351,0.00016756542,0.00007098793,0.000015329746,0.00020889961,0.00022391278,0.000012137096],"category_scores_gemma":[0.000066145345,0.0001429547,0.000082029896,0.00024090124,0.000080533406,0.000015288719,0.00009146678,0.00015313974,2.9115697e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000141830415,0.00015634089,0.0059935558,0.0000125030465,0.000026717995,0.0000013397413,0.0005847297,0.00057677826,0.9872636,0.0038956166,0.0000014927869,0.0014731422],"study_design_scores_gemma":[0.0003763559,0.00030889775,0.03073499,0.0000074514687,0.000025378737,0.000023978579,0.00088752946,0.0025669164,0.96387523,0.00044576495,0.00056389155,0.0001836199],"about_ca_topic_score_codex":0.00064753095,"about_ca_topic_score_gemma":0.00018993577,"teacher_disagreement_score":0.13993302,"about_ca_system_score_codex":0.00008244206,"about_ca_system_score_gemma":0.00008003354,"threshold_uncertainty_score":0.5829524},"labels":[],"label_agreement":null},{"id":"W2408845706","doi":"10.1007/978-1-61779-197-0_14","title":"Signature-tagged Mutagenesis to Characterize Genes Through Competitive Selection of Bar-coded Genome Libraries","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research; Centers for Disease Control and Prevention","keywords":"Gene; Genome; Biology; Mutant; Mutagenesis; Computational biology; Genetics; Candida albicans","score_opus":0.040575223669726455,"score_gpt":0.350786387124181,"score_spread":0.31021116345445454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408845706","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4640945,0.0018887654,0.53094035,0.000093661205,0.0001864026,0.00047753163,0.00010791859,0.000018432398,0.0021924698],"genre_scores_gemma":[0.23584919,0.0002680269,0.7626915,0.000561455,0.00009153979,0.00010165198,0.00018141001,0.00004611137,0.0002091417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973417,0.0010996471,0.00038973897,0.00060996856,0.00010801104,0.0004509679],"domain_scores_gemma":[0.9991945,0.000045772806,0.0001098183,0.0003780958,0.00017162226,0.00010015853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005708382,0.00025474257,0.00038895814,0.00016581791,0.00005194703,0.000011451178,0.00042806118,0.00038978292,0.00017695893],"category_scores_gemma":[0.00024342719,0.0002403656,0.00013727114,0.00037772788,0.00021247951,0.0000058187416,0.00036254548,0.00018627843,0.000008976187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035254424,0.000105665604,0.0022358368,0.000028273716,0.00009510546,0.000007763076,0.00027018378,0.000024083727,0.9910523,0.0021368808,0.0000069478992,0.0036843691],"study_design_scores_gemma":[0.00035120302,0.00079448614,0.0071513527,0.000010041698,0.000015161853,0.000010833112,0.00007377222,0.000023046861,0.9826402,0.00126509,0.007403225,0.0002615557],"about_ca_topic_score_codex":0.000066951434,"about_ca_topic_score_gemma":0.000018952196,"teacher_disagreement_score":0.23175114,"about_ca_system_score_codex":0.000016932718,"about_ca_system_score_gemma":0.0001043891,"threshold_uncertainty_score":0.98018247},"labels":[],"label_agreement":null},{"id":"W2408865672","doi":"10.1007/978-1-61779-074-4_16","title":"Utility of Array Comparative Genomic Hybridization in Cytogenetic Analysis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Comparative genomic hybridization; Karyotype; Biology; Breakpoint; Genetics; Tiling array; Cytogenetics; Chromosome; Computational biology; DNA microarray; Gene","score_opus":0.049085058710596985,"score_gpt":0.36137734028058344,"score_spread":0.31229228156998645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408865672","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5475544,0.00033343004,0.4506023,0.000003923431,0.000032298598,0.00009533628,0.000013828852,0.0000021373023,0.0013624055],"genre_scores_gemma":[0.71271807,0.000032440013,0.28709033,0.00002979898,0.000008114323,0.000016889331,0.00007845836,0.0000060414345,0.000019881803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802184,0.00091622246,0.00045968703,0.00035579965,0.000035622626,0.00021085248],"domain_scores_gemma":[0.99938554,0.000022496068,0.00014508565,0.00035555393,0.000059671933,0.000031628166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062194676,0.00014062402,0.0003601865,0.0002562631,0.00001738645,0.0000029476487,0.00020403185,0.00015576169,0.000092481925],"category_scores_gemma":[0.00006617304,0.00014301379,0.00012697164,0.0004333597,0.00013312054,0.0000019730792,0.00008042191,0.00007730572,0.0000014457856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004584921,0.00007711925,0.21400811,0.000006553511,0.00013411164,0.0000014778929,0.00038514737,0.0002654651,0.78394425,0.00076079345,0.0000010760517,0.00037007144],"study_design_scores_gemma":[0.000290475,0.000117826676,0.1554056,0.0000024956146,0.00006130131,0.0000026410696,0.00018681455,0.0002591955,0.84147596,0.0018912666,0.00016965985,0.00013675523],"about_ca_topic_score_codex":0.00026574527,"about_ca_topic_score_gemma":0.0003339715,"teacher_disagreement_score":0.1651637,"about_ca_system_score_codex":0.000012214696,"about_ca_system_score_gemma":0.000058405392,"threshold_uncertainty_score":0.58319336},"labels":[],"label_agreement":null},{"id":"W2408878595","doi":"10.1007/978-1-59745-540-4_3","title":"SGAM: An Array-Based Approach for High-Resolution Genetic Mapping in Saccharomyces cerevisiae","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Genetic screen; Saccharomyces cerevisiae; Synthetic lethality; Computational biology; Biology; Selectable marker; Genome; Genetics; Gene; Function (biology); Genetic analysis; Mutant; Transformation (genetics)","score_opus":0.037063113897794216,"score_gpt":0.3869033983048242,"score_spread":0.34984028440702997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408878595","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21043423,0.0016553894,0.7868789,0.00016345133,0.00006785444,0.00053691346,0.000014455453,0.000011061311,0.00023779586],"genre_scores_gemma":[0.3410756,0.00005719639,0.6579993,0.00036213468,0.00009364557,0.00011542398,0.00024737656,0.000020733116,0.0000286288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996885,0.0011511917,0.00042271646,0.0008133676,0.000101857084,0.00062588166],"domain_scores_gemma":[0.9991475,0.000045686378,0.000086474334,0.0005283429,0.00008285355,0.00010919634],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012595354,0.00025966705,0.00034849427,0.00029931823,0.000054780972,0.000024418221,0.00044262962,0.0004152596,0.000009434734],"category_scores_gemma":[0.00027043265,0.0002551433,0.000113950664,0.00033265247,0.00011019328,0.0000034245572,0.00006064783,0.0002120494,0.0000014484641],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011785133,0.00018494694,0.0030140053,0.00003369481,0.000013329691,0.000004316629,0.000021513184,0.004052078,0.96692497,0.0003546277,0.000014954026,0.025263717],"study_design_scores_gemma":[0.0017181522,0.0013484197,0.010363557,0.000021406,0.000010680631,0.00000978758,0.00004934975,0.009463005,0.96926564,0.0053092716,0.0019757275,0.00046500828],"about_ca_topic_score_codex":0.000043999782,"about_ca_topic_score_gemma":0.000015219674,"teacher_disagreement_score":0.13064139,"about_ca_system_score_codex":0.000038655096,"about_ca_system_score_gemma":0.00010692739,"threshold_uncertainty_score":0.9999901},"labels":[],"label_agreement":null},{"id":"W2408912216","doi":"10.1007/978-1-61779-276-2_14","title":"Filtering and Interpreting Large-Scale Experimental Protein–Protein Interaction Data","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Computer science; Scale (ratio); Computational biology; Benchmark (surveying); Budding yeast; Field (mathematics); Identification (biology); Function (biology); Biology; Data science; Data mining; Saccharomyces cerevisiae; Yeast; Evolutionary biology; Geography; Genetics; Cartography; Mathematics; Ecology","score_opus":0.036691646409938515,"score_gpt":0.37209577742225936,"score_spread":0.33540413101232086,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408912216","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28362143,0.00070315937,0.7137356,0.000018769506,0.00012343164,0.00024974273,0.000012993753,0.000009736774,0.0015251423],"genre_scores_gemma":[0.39059457,0.000010555802,0.6089906,0.00016640304,0.000040396993,0.000043423675,0.00009655492,0.00001783128,0.000039659924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985342,0.00034020687,0.00032348503,0.00045806004,0.000034102533,0.0003099482],"domain_scores_gemma":[0.9992038,0.000009892979,0.000111661895,0.0005980259,0.000017993112,0.000058652135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094351947,0.00017631405,0.00018872344,0.00006544244,0.000047304376,0.000017788157,0.00035768704,0.0002262906,0.000036853937],"category_scores_gemma":[0.000091089016,0.00017224789,0.000039584294,0.000060200622,0.00009209383,0.00000943609,0.0010406934,0.00019018255,0.0000024425494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007586141,0.000045171633,0.0002683939,0.000012647843,0.000024815716,0.0000037558546,0.00033218347,0.0000019071168,0.98848075,0.00045151226,0.000012235878,0.010290782],"study_design_scores_gemma":[0.00047892903,0.00031403254,0.000065974156,0.000049891692,0.0000069538646,0.000031178715,0.0006038309,0.0048255143,0.98579246,0.0015974984,0.005959798,0.00027395776],"about_ca_topic_score_codex":0.000031920827,"about_ca_topic_score_gemma":0.000018652583,"teacher_disagreement_score":0.10697315,"about_ca_system_score_codex":0.000013337181,"about_ca_system_score_gemma":0.000017103599,"threshold_uncertainty_score":0.7024065},"labels":[],"label_agreement":null},{"id":"W2408939575","doi":"10.1007/978-1-60761-646-7_17","title":"Detection and Quantification of DNA Strand Breaks Using the ROPS (Random Oligonucleotide Primed Synthesis) Assay","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"DNA; DNA damage; Chromatin; Biology; Oligonucleotide; DNA repair; Replication protein A; Molecular biology; Genetics; DNA-binding protein; Gene; Transcription factor","score_opus":0.01737017304746104,"score_gpt":0.3392082063759127,"score_spread":0.3218380333284517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408939575","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49507186,0.00019213805,0.50430214,0.000026858781,0.0001521364,0.00017789965,0.0000036798901,0.0000062088216,0.00006710018],"genre_scores_gemma":[0.72705567,0.000038143386,0.2727732,0.000039309016,0.000033716955,0.000026604741,0.000006245848,0.00001938517,0.000007729269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976221,0.0013717425,0.00032463722,0.00040316928,0.00006378356,0.00021458136],"domain_scores_gemma":[0.9990223,0.00018932705,0.0001703663,0.0005071676,0.00006891612,0.000041897336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025732417,0.00016080207,0.00024492719,0.00008769043,0.000060187616,0.000012473447,0.00021028126,0.00033811692,0.0000064498736],"category_scores_gemma":[0.0012745857,0.00012730865,0.000087247456,0.0001275074,0.00025168835,0.0000031945037,0.0000993179,0.00020450687,3.993926e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098620265,0.000028072303,0.00039885053,0.000014882919,0.000039582766,0.000001157216,0.000021212958,0.000033854205,0.96950066,0.00038784335,4.3766178e-7,0.029474802],"study_design_scores_gemma":[0.00042644524,0.00008134662,0.0005941669,0.000007322841,0.000043001113,0.000043833104,0.000034773573,0.0017526107,0.9949664,0.0013911464,0.0005219197,0.00013705896],"about_ca_topic_score_codex":0.00008393478,"about_ca_topic_score_gemma":0.00011289024,"teacher_disagreement_score":0.2319838,"about_ca_system_score_codex":0.0000073209762,"about_ca_system_score_gemma":0.00003900083,"threshold_uncertainty_score":0.5191496},"labels":[],"label_agreement":null},{"id":"W2408960761","doi":"10.1007/978-1-4939-3724-0_4","title":"Drug-Discovery Pipeline for Novel Inhibitors of the Androgen Receptor","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hormonal and reproductive studies","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Androgen receptor; Pipeline (software); Drug; Computer science; Pharmacology; Computational biology; Medicine; Biology; Internal medicine; Prostate cancer; Programming language; Cancer","score_opus":0.02923858163143705,"score_gpt":0.3805364306181459,"score_spread":0.35129784898670885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408960761","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17824548,0.001779991,0.81278664,0.005693467,0.00052597735,0.00054484984,0.00004048832,0.000009378684,0.0003737363],"genre_scores_gemma":[0.22556312,0.00015530449,0.7706123,0.00043578327,0.0003562532,0.000112136055,0.000006635556,0.000029456334,0.0027289828],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990262,0.00022403155,0.00025511291,0.0002739056,0.000053147993,0.0001676037],"domain_scores_gemma":[0.99929786,0.00023853776,0.00008275825,0.00026085085,0.000098437675,0.00002154516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009138197,0.00010126254,0.00032408893,0.00006034937,0.00002444453,9.409796e-7,0.000090842586,0.00007515985,0.000005649328],"category_scores_gemma":[0.0015335741,0.00004418867,0.00015369228,0.00014965558,0.00031200546,0.000013083432,0.00011053466,0.00006787753,9.032889e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012886619,0.00007141186,0.008543355,0.000023818864,0.000052091415,5.078612e-7,0.00006559395,4.3460196e-7,0.96184105,0.0016592677,0.00015063696,0.027462965],"study_design_scores_gemma":[0.0010484287,0.00011061632,0.001485806,0.0000595128,0.000033560893,0.000005216583,0.00007506303,0.0000036908639,0.97576845,0.003271004,0.018068766,0.000069868016],"about_ca_topic_score_codex":0.0000135376895,"about_ca_topic_score_gemma":0.000003987343,"teacher_disagreement_score":0.047317643,"about_ca_system_score_codex":0.000025309457,"about_ca_system_score_gemma":0.00004442461,"threshold_uncertainty_score":0.18359421},"labels":[],"label_agreement":null},{"id":"W2408966166","doi":"10.1007/978-1-59745-477-3_8","title":"Binding Assays for Abscisic Acid Receptors","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Calcium signaling and nucleotide metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Abscisic acid; Receptor; Chemistry; Cell biology; Biology; Biochemistry; Gene","score_opus":0.033898364959863814,"score_gpt":0.3759616433428361,"score_spread":0.3420632783829723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2408966166","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26054657,0.0019157242,0.7359474,0.00009674927,0.0007394366,0.00024708567,0.000015452459,0.000022340355,0.00046931257],"genre_scores_gemma":[0.08707105,0.00029080815,0.910889,0.00055100914,0.0002888814,0.00013139522,0.0001800727,0.00006499102,0.00053278246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978169,0.0006486912,0.00036777928,0.0006164884,0.00006929631,0.0004808344],"domain_scores_gemma":[0.9992092,0.00009054112,0.00010678793,0.00042997254,0.000073726354,0.00008973739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014426045,0.00023621842,0.0003569886,0.00018548439,0.00011319822,0.000008954794,0.0003081135,0.00037587096,0.000029335702],"category_scores_gemma":[0.0009463959,0.00023072198,0.00023619394,0.00023039921,0.00019599589,0.0000023683713,0.00013038723,0.00017064504,0.00001034853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007525701,0.000038622224,0.0013534335,0.000008041853,0.000038573566,0.0000073970286,0.000037147922,0.0000289347,0.98774546,0.0007259358,0.0005416014,0.009399581],"study_design_scores_gemma":[0.0007810351,0.00023451896,0.00015086085,0.0000066295693,0.000015737507,0.00004605099,0.000019671963,0.00006595371,0.9114023,0.0014770585,0.08551733,0.00028285093],"about_ca_topic_score_codex":0.000015162073,"about_ca_topic_score_gemma":0.0000046191744,"teacher_disagreement_score":0.17494166,"about_ca_system_score_codex":0.000020116258,"about_ca_system_score_gemma":0.000066473534,"threshold_uncertainty_score":0.94085693},"labels":[],"label_agreement":null},{"id":"W2409007789","doi":"10.1007/978-1-62703-005-2_10","title":"Cell Culture-Based Assays to Test for Bacterial Adherence and Internalization","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Internalization; Test (biology); Cell; Biology; Genetics; Ecology","score_opus":0.031601803686272904,"score_gpt":0.391774754697389,"score_spread":0.36017295101111607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409007789","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22790363,0.0003075519,0.7703852,0.00040007842,0.00038461716,0.00045493024,0.0000122927795,0.000021568454,0.00013012855],"genre_scores_gemma":[0.23463738,0.0000149954285,0.76295656,0.002018881,0.000110166904,0.00015120601,0.000038611786,0.00001888476,0.000053327156],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986736,0.0004028327,0.00025849356,0.00026221763,0.000036735604,0.00036607403],"domain_scores_gemma":[0.99933195,0.00022597986,0.00006758257,0.00016597469,0.00008854267,0.00011994365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007713585,0.00015569394,0.0003261261,0.00013070501,0.000026669957,0.000005750018,0.00007267253,0.000200257,0.000016909124],"category_scores_gemma":[0.001523444,0.00013027876,0.000045705638,0.00013350198,0.000073656054,0.000022229862,0.000072845,0.00014927394,0.0000049034215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002070055,0.00013963517,0.24298774,0.000032245156,0.000032283366,0.000003170429,0.00024819715,0.0000023459927,0.75343156,0.000073352574,0.00012685466,0.0027156365],"study_design_scores_gemma":[0.008043215,0.0081415735,0.05375509,0.00015799953,0.00030559226,0.00006380221,0.00011116548,0.00055772514,0.88605255,0.000552721,0.041803118,0.0004554254],"about_ca_topic_score_codex":0.000012997,"about_ca_topic_score_gemma":0.000006484577,"teacher_disagreement_score":0.18923265,"about_ca_system_score_codex":0.000045484685,"about_ca_system_score_gemma":0.000019079343,"threshold_uncertainty_score":0.5312613},"labels":[],"label_agreement":null},{"id":"W2409010323","doi":"10.1007/978-1-4939-3524-6_1","title":"Increased Depth and Breadth of Plasma Protein Quantitation via Two-Dimensional Liquid Chromatography/Multiple Reaction Monitoring-Mass Spectrometry with Labeled Peptide Standards","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Genome British Columbia","funders":"","keywords":"Chromatography; Chemistry; Mass spectrometry; Selected reaction monitoring; Quantitative proteomics; Biomarker discovery; Label-free quantification; Proteomics; Liquid chromatography–mass spectrometry; Sample preparation; Tandem mass spectrometry; Biochemistry","score_opus":0.012154219885223548,"score_gpt":0.3496978858859672,"score_spread":0.33754366600074365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409010323","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50971764,0.000056510442,0.4898815,0.000024752087,0.000006515387,0.00016046461,0.000026432954,0.000038544684,0.000087640474],"genre_scores_gemma":[0.4609756,0.000012200029,0.5388283,0.0000032968483,0.000011598165,0.00013598938,0.000010734531,0.000016258171,0.00000600351],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987719,0.00018961786,0.0003119337,0.00038421902,0.00012452895,0.000217775],"domain_scores_gemma":[0.9990261,0.00024159605,0.00023795369,0.00029901086,0.00013858595,0.000056729783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056414853,0.00017775233,0.0002859986,0.00017052364,0.000045902867,0.000004889312,0.000111330104,0.00016154126,0.000012082665],"category_scores_gemma":[0.00023419537,0.00013441469,0.000047659618,0.00025923553,0.0001825717,0.000049177113,0.00004557582,0.00015790979,3.3427315e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046332538,0.000050756433,0.008999927,0.00003525639,0.000037936104,0.0000038924895,0.000009049306,0.000008781706,0.9858386,0.0014181712,3.8399278e-7,0.0031339212],"study_design_scores_gemma":[0.0011886532,0.0002836089,0.0003768204,0.0001298843,0.000016994949,0.000018484156,0.000012312286,0.00015684713,0.99070895,0.0068645105,0.000067280715,0.00017568213],"about_ca_topic_score_codex":0.00016299526,"about_ca_topic_score_gemma":0.000022314578,"teacher_disagreement_score":0.048946846,"about_ca_system_score_codex":0.00009087512,"about_ca_system_score_gemma":0.00005636232,"threshold_uncertainty_score":0.5481272},"labels":[],"label_agreement":null},{"id":"W2409032874","doi":"10.1007/978-1-4939-2938-2_20","title":"Mechanical Testing of Cartilage Constructs","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Cartilage; Psychology; Medicine; Anatomy","score_opus":0.06590576153130072,"score_gpt":0.40453858507751056,"score_spread":0.3386328235462098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409032874","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6887364,0.0007970863,0.30318677,0.00010824504,0.00032082648,0.00033939874,0.0000044586695,0.00003999926,0.006466839],"genre_scores_gemma":[0.21398653,0.0000018668751,0.7858061,0.00012727623,0.000016278475,0.000011968993,0.000007182224,0.000010043668,0.000032760418],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988481,0.0004304763,0.00025384064,0.00020382211,0.000065141496,0.00019862433],"domain_scores_gemma":[0.99938744,0.00014300457,0.000063743886,0.0002096197,0.00009044827,0.000105721316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077408546,0.00010084772,0.00036330643,0.000104812694,0.000007768847,0.0000016695398,0.00005610153,0.00015254972,0.000014595076],"category_scores_gemma":[0.0015703649,0.000086720225,0.000051601,0.00020762929,0.00008913926,0.000009853225,0.000057256882,0.000108241635,0.0000041186913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004808981,0.000041993302,0.0034012746,0.000009436227,0.0000075797884,0.00013648644,0.00003693844,6.7386503e-7,0.9262391,0.011412747,0.0000022704266,0.058663413],"study_design_scores_gemma":[0.002203525,0.0017216414,0.00003065154,0.00004020955,0.000039956867,0.00016489277,0.00008225531,0.000050729843,0.97510266,0.020108318,0.00038225905,0.000072924544],"about_ca_topic_score_codex":0.000014393567,"about_ca_topic_score_gemma":0.0000034119798,"teacher_disagreement_score":0.48261935,"about_ca_system_score_codex":0.00002971623,"about_ca_system_score_gemma":0.00010094248,"threshold_uncertainty_score":0.3536348},"labels":[],"label_agreement":null},{"id":"W2409072573","doi":"10.1007/978-1-62703-556-9_2","title":"Digital Image Analysis of Cells Stained with the Senescence-Associated β-Galactosidase Assay","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; Ontario Institute for Cancer Research","funders":"","keywords":"Senescence; Staining; Cell biology; Cellular senescence; Biology; Pathology; Medicine; Biochemistry; Phenotype; Gene","score_opus":0.01078932459432373,"score_gpt":0.33178557294468,"score_spread":0.32099624835035623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409072573","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39934108,0.00013710592,0.5983438,0.00075140625,0.00004214428,0.0004245256,0.000024726509,0.000033152573,0.00090209034],"genre_scores_gemma":[0.8385996,0.000021481797,0.16035296,0.00052546343,0.0000119377255,0.00003937292,0.00008008078,0.000024067947,0.00034504096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975321,0.0011031692,0.00040016221,0.0003907857,0.00017069999,0.0004030259],"domain_scores_gemma":[0.9982215,0.00065319054,0.00021324557,0.0005515523,0.00025640323,0.00010407704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001061437,0.0002229761,0.0007460123,0.00041353822,0.00003802234,0.000026585405,0.00022162398,0.00017934432,0.00014938493],"category_scores_gemma":[0.00078244455,0.00013357941,0.00020538538,0.0017293761,0.0004229358,0.000060327708,0.00007288726,0.00027246212,0.000007668951],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006481797,0.0001629929,0.052108016,0.00001667684,0.0006674817,0.000052599436,0.00019918605,0.000013699015,0.9346224,0.000078261655,0.00004787486,0.011965971],"study_design_scores_gemma":[0.002086274,0.0008296492,0.17056355,0.00006560848,0.0014675169,0.000017949713,0.0009677722,0.0046573295,0.8177922,0.00042029098,0.00062525814,0.00050662144],"about_ca_topic_score_codex":0.0002747952,"about_ca_topic_score_gemma":0.00003799867,"teacher_disagreement_score":0.43925852,"about_ca_system_score_codex":0.000058193473,"about_ca_system_score_gemma":0.000088501794,"threshold_uncertainty_score":0.544721},"labels":[],"label_agreement":null},{"id":"W2409180952","doi":"10.1007/978-1-4939-2172-0_24","title":"Measuring Tremor with a Smartphone","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurological disorders and treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital; Institut Universitaire de Gériatrie de Montréal; Université du Québec à Montréal","funders":"","keywords":"Identification (biology); Smartphone application; Computer science; Scale (ratio); Smartphone app; Relevance (law); Human–computer interaction; Multimedia; Cartography; Geography","score_opus":0.046296583065481255,"score_gpt":0.3727977777506923,"score_spread":0.32650119468521105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409180952","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36204657,0.00022305094,0.62872386,0.00074922544,0.000048662394,0.00018918964,4.886644e-7,0.000028216362,0.007990773],"genre_scores_gemma":[0.3495713,0.000010201066,0.6477372,0.0025112145,0.000014373586,0.000033038872,0.0000050940516,0.00001327507,0.0001043262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878114,0.00053983025,0.00012885417,0.00028344835,0.000049159895,0.00021757133],"domain_scores_gemma":[0.99956167,0.00010346367,0.000030909352,0.00022343309,0.000019272124,0.000061224884],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003622104,0.00011490805,0.0002945724,0.00008028999,0.000018096782,0.0000029313783,0.000053174448,0.00009040544,0.000041615564],"category_scores_gemma":[0.00026760923,0.00007303606,0.00004947063,0.00015438798,0.000079480626,0.0000060823218,0.00002831864,0.00013739718,0.000012051921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005739197,0.00045498283,0.12991272,0.000030505991,0.00011000739,0.0003796021,0.00004407417,0.00001540616,0.65236664,0.003044059,0.000014697021,0.21305336],"study_design_scores_gemma":[0.02489365,0.013713222,0.26408178,0.00015238975,0.00042139654,0.00035676867,0.000054293898,0.0017371406,0.54237556,0.13587621,0.015362327,0.00097527966],"about_ca_topic_score_codex":0.000023066545,"about_ca_topic_score_gemma":0.000006726252,"teacher_disagreement_score":0.21207808,"about_ca_system_score_codex":0.000013024197,"about_ca_system_score_gemma":0.000012327363,"threshold_uncertainty_score":0.29783243},"labels":[],"label_agreement":null},{"id":"W2409315671","doi":"10.1007/978-1-60761-646-7_6","title":"Analysis of Mutation/Rearrangement Frequencies and Methylation Patterns at a Given DNA Locus Using Restriction Fragment Length Polymorphism","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Restriction enzyme; Restriction fragment length polymorphism; Biology; Molecular biology; DNA methylation; Locus (genetics); Genetics; Terminal restriction fragment length polymorphism; Amplified fragment length polymorphism; DNA; Restriction fragment; Methylation; Gene; Polymerase chain reaction; Population; Gene expression","score_opus":0.027784361369173532,"score_gpt":0.3249954253226165,"score_spread":0.297211063953443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409315671","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9311334,0.00013972633,0.06811211,0.00030537153,0.00009273096,0.00012766443,0.000044341443,0.000008472931,0.000036157166],"genre_scores_gemma":[0.914405,0.000032142707,0.0853868,0.00004153447,0.000025181154,0.000012880891,0.000088568355,7.8365156e-7,0.0000071416316],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99889404,0.0004085209,0.00024803964,0.0002438903,0.00007303512,0.00013245658],"domain_scores_gemma":[0.99952966,0.00019106046,0.00012980422,0.000065812135,0.000048069916,0.000035577872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047211992,0.00009041007,0.0001991949,0.000091217815,0.0000740713,0.000009659428,0.00007812577,0.00012307242,0.00018800246],"category_scores_gemma":[0.00011037505,0.000045133274,0.00007464533,0.0005549895,0.000059509806,0.000022121714,0.000067825335,0.000080050995,4.2044823e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005144068,0.000025935726,0.04935222,0.0000016367467,0.000078958714,0.0000017221003,0.000118703014,0.00012692518,0.925977,0.0003674546,1.7598477e-7,0.023944117],"study_design_scores_gemma":[0.00021031236,0.00019037708,0.56176746,0.0000062264808,0.00031783764,0.000006161315,0.00015880723,0.005031311,0.42696685,0.0048856516,0.0002774803,0.0001815489],"about_ca_topic_score_codex":0.0015060356,"about_ca_topic_score_gemma":0.00207162,"teacher_disagreement_score":0.51241523,"about_ca_system_score_codex":0.000028849608,"about_ca_system_score_gemma":0.000005606381,"threshold_uncertainty_score":0.22766854},"labels":[],"label_agreement":null},{"id":"W2409348997","doi":"10.1007/978-1-60761-103-5_23","title":"Immunofluorescence Analysis of Human Spermatocytes","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Synapsis; Synaptonemal complex; Meiosis; Prophase; Centromere; Biology; Genetics; Genetic recombination; Chromosomal crossover; Immunofluorescence; Bivalent (engine); Chromosome; Cell biology; Recombination; Antibody; Gene; Chemistry","score_opus":0.06815434413640006,"score_gpt":0.49858777610210653,"score_spread":0.4304334319657065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409348997","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000012262878,0.89507306,0.10359832,0.000007828346,0.00004102995,0.00030671436,0.00002625546,0.000020483922,0.00091406103],"genre_scores_gemma":[0.000005141679,0.6701559,0.3293778,0.000052384574,0.000014595067,0.000018119705,0.00034269644,0.000014749865,0.000018602746],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969492,0.0014218123,0.000843215,0.00041575852,0.00009202932,0.00027801434],"domain_scores_gemma":[0.99815834,0.00067306816,0.0003393236,0.0007044852,0.00005326289,0.00007154064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009559631,0.00030566103,0.003265361,0.0010909546,0.000017434797,0.000004442718,0.00030792414,0.0005681624,0.000045970097],"category_scores_gemma":[0.0013943105,0.00023748078,0.00092070585,0.0015279189,0.00016362294,0.0000072842045,0.00012156331,0.00047888266,0.0000036720576],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000070448796,0.000082283776,0.00028644977,0.0014268056,0.0012356403,0.00012322629,0.000011839422,0.0000017360304,0.0023151678,0.0015871524,0.000008788665,0.99291384],"study_design_scores_gemma":[0.0015566896,0.002083384,0.0019832728,0.029718922,0.06904578,0.00027060488,0.000022354923,0.00023506705,0.011665219,0.0029281143,0.87865615,0.0018344602],"about_ca_topic_score_codex":0.0001000122,"about_ca_topic_score_gemma":0.0000033712747,"teacher_disagreement_score":0.9910794,"about_ca_system_score_codex":0.000062708765,"about_ca_system_score_gemma":0.00010183538,"threshold_uncertainty_score":0.96841854},"labels":[],"label_agreement":null},{"id":"W2409379994","doi":"10.1007/978-1-4939-2703-6_3","title":"Mouse Embryos’ Fusion for the Tetraploid Complementation Assay","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Centre for Phenogenomics; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Biology; Chimera (genetics); Embryo; Complementation; Mutant; Germline; Phenotype; Cell fusion; Blastomere; Embryonic stem cell; Genetics; Cell biology; Embryogenesis; Gene; Cell culture","score_opus":0.07194208472965267,"score_gpt":0.4452411221948745,"score_spread":0.3732990374652218,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409379994","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0407338,0.0012662087,0.95591193,0.00053867797,0.0002592897,0.0007376956,0.000026388287,0.000012115204,0.00051385997],"genre_scores_gemma":[0.07317002,0.0002113789,0.9231601,0.0010636074,0.00019286337,0.00045968208,0.00055480545,0.00006174429,0.001125846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972923,0.0014519183,0.000290719,0.0004377694,0.00012396225,0.0004033506],"domain_scores_gemma":[0.9989898,0.0002158923,0.000080829224,0.00047458045,0.0001501419,0.000088748704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003697054,0.00016456364,0.00018516122,0.00009849905,0.00007548052,0.000019772791,0.00042822058,0.00020322546,0.000012677513],"category_scores_gemma":[0.0010361389,0.00012424619,0.00010616252,0.00016768608,0.00014163282,0.0000024705228,0.00025271144,0.00014584484,0.000006612563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012216167,0.000045546894,0.00086358906,0.000009719841,0.00004016012,0.0000020286925,0.00003444608,0.00021687213,0.9825415,0.0005546492,0.00078499276,0.01478434],"study_design_scores_gemma":[0.0012772242,0.00045005544,0.00016374105,0.0000033268373,0.000014268455,0.000008961057,0.00018770152,0.0018001611,0.9173217,0.0016745798,0.07691854,0.00017976921],"about_ca_topic_score_codex":0.000053224503,"about_ca_topic_score_gemma":0.000047188103,"teacher_disagreement_score":0.07613355,"about_ca_system_score_codex":0.000039597115,"about_ca_system_score_gemma":0.00009134512,"threshold_uncertainty_score":0.50666124},"labels":[],"label_agreement":null},{"id":"W2409388355","doi":"10.1007/978-1-61779-510-7_1","title":"Live Imaging of Drosophila Embryos: Quantifying Protein Numbers and Dynamics at Subcellular Locations","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Drosophila (subgenus); Embryo; Dynamics (music); Live cell imaging; Cell biology; Biology; Subcellular localization; Computational biology; Evolutionary biology; Genetics; Physics; Cell; Acoustics; Cytoplasm; Gene","score_opus":0.02549784435116043,"score_gpt":0.37123025453162956,"score_spread":0.34573241018046913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409388355","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2675997,0.0014871485,0.7301696,0.000027840802,0.00004136507,0.00030484737,0.000011669585,0.000017811086,0.00033998475],"genre_scores_gemma":[0.25869894,0.0001045612,0.74093664,0.000062728366,0.000009157613,0.000056781642,0.000057742396,0.000029746647,0.000043725817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828833,0.00047324487,0.0003625655,0.00052108365,0.000046716497,0.00030807676],"domain_scores_gemma":[0.9992048,0.000023350518,0.00017231055,0.00046610786,0.00007823766,0.000055160737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006013407,0.0002085858,0.00026955505,0.00012152018,0.00005461201,0.0000047090375,0.00025223003,0.00022735138,0.000010986446],"category_scores_gemma":[0.00025490017,0.00022104905,0.00007292247,0.00013856056,0.0005129081,0.0000050636568,0.00034806845,0.00015363799,0.0000012695286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048314276,0.00004192922,0.028879073,0.000031115258,0.00001911823,0.000009765737,0.000119496035,0.0000030678548,0.96462744,0.0036636647,0.0000028867414,0.0025541252],"study_design_scores_gemma":[0.00021602648,0.00013610077,0.0007170212,0.000036918664,0.000013176122,0.000025867357,0.00012293141,0.00034683914,0.99205536,0.005958971,0.00014506002,0.00022573235],"about_ca_topic_score_codex":0.00015681879,"about_ca_topic_score_gemma":0.00008944274,"teacher_disagreement_score":0.028162051,"about_ca_system_score_codex":0.000047430563,"about_ca_system_score_gemma":0.000038106253,"threshold_uncertainty_score":0.90141183},"labels":[],"label_agreement":null},{"id":"W2409389198","doi":"10.1007/978-1-61779-151-2_32","title":"Purification, Functionalization, and Bioconjugation of Carbon Nanotubes","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbon Nanotubes in Composites","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Bioconjugation; Biomolecule; Carbon nanotube; Nanotechnology; Surface modification; Biosensor; Covalent bond; Materials science; Conjugate; Nanoparticle; Chemistry; Organic chemistry","score_opus":0.028297229403705625,"score_gpt":0.3334811113565255,"score_spread":0.30518388195281987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409389198","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4924494,0.0007823178,0.5047996,0.000039410825,0.00030795884,0.00014220101,0.0000033744736,0.000023319542,0.001452421],"genre_scores_gemma":[0.358753,0.000024595956,0.6410966,0.000055983564,0.000013456913,0.000028768638,0.000006663888,0.000008546247,0.000012415935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845135,0.0007524779,0.00033220425,0.00027789522,0.000058929858,0.00012714327],"domain_scores_gemma":[0.99934036,0.00016230189,0.00011812201,0.00024584995,0.000109211935,0.000024130251],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011058953,0.00009309273,0.00018159876,0.00017592794,0.000020004049,0.0000056069507,0.00013639231,0.00011472743,0.00008746733],"category_scores_gemma":[0.00041356843,0.00008915203,0.000024157405,0.00023865423,0.00023753103,0.0000300413,0.000070889946,0.000045538083,0.0000015554153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018531324,0.000028272945,0.012187233,0.000012430899,0.000004522446,7.106435e-7,0.00020458447,0.0000076103224,0.95290506,0.0334463,0.0000015054039,0.0011832438],"study_design_scores_gemma":[0.00015776214,0.00006516738,0.0034835737,0.000008502669,0.000010074324,0.000006270792,0.000015527161,0.0002163851,0.96087533,0.03492204,0.00015210811,0.00008728342],"about_ca_topic_score_codex":0.00016616317,"about_ca_topic_score_gemma":0.0000052957885,"teacher_disagreement_score":0.13629697,"about_ca_system_score_codex":0.000019918312,"about_ca_system_score_gemma":0.000026731044,"threshold_uncertainty_score":0.36355144},"labels":[],"label_agreement":null},{"id":"W2409405257","doi":"10.1007/978-1-4939-2428-8_5","title":"Longitudinal Studies 2: Modeling Data Using Multivariate Analysis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Statistical Methods and Bayesian Inference","field":"Mathematics","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Foothills Medical Centre; University of Calgary","funders":"","keywords":"Multivariate statistics; Longitudinal data; Multivariate analysis; Computer science; Econometrics; Statistics; Data mining; Mathematics; Machine learning","score_opus":0.5605105742236646,"score_gpt":0.6070462698177319,"score_spread":0.04653569559406734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409405257","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032751542,0.0013264954,0.99483687,0.000046051402,0.00018728389,0.00012251732,0.000031393425,0.000030890893,0.00014337468],"genre_scores_gemma":[0.006420708,0.000023812388,0.9934273,0.000049302715,0.000034607652,0.000008915945,0.000014321131,0.000017352097,0.0000036793972],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9955479,0.0028442258,0.00053495046,0.0006092474,0.00011528882,0.00034837605],"domain_scores_gemma":[0.9969585,0.0017156954,0.00013055754,0.00091972505,0.00017820923,0.000097314354],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.005737109,0.00019975101,0.0007715437,0.0003040992,0.000041405718,0.00001813042,0.000494296,0.00014732429,0.00001491173],"category_scores_gemma":[0.018186804,0.00016324659,0.000077793906,0.00080660323,0.00013636384,0.0000606062,0.00063671224,0.00022426333,0.0000015900886],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000120564735,0.00028667593,0.013217465,0.00015965104,0.0032277186,0.00025615602,0.0011007813,0.005595201,0.04803727,0.8178256,0.000024079442,0.11014882],"study_design_scores_gemma":[0.00017759118,0.000023053908,0.000016596323,0.000012334435,0.00035990583,0.000004342451,0.000110976005,0.44920522,0.00052137044,0.5494275,0.000014659282,0.00012645547],"about_ca_topic_score_codex":0.00016664503,"about_ca_topic_score_gemma":0.000031727428,"teacher_disagreement_score":0.44361,"about_ca_system_score_codex":0.000071542316,"about_ca_system_score_gemma":0.00006028481,"threshold_uncertainty_score":0.9900834},"labels":[],"label_agreement":null},{"id":"W2409453722","doi":"10.1007/978-1-4939-2926-9_3","title":"Expression and Purification of Recombinant CDKs: CDK7, CDK8, and CDK9","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cyclin-dependent kinase; Cyclin-dependent kinase 7; Recombinant DNA; Kinase; Biology; Cloning (programming); Cell biology; Gene; Cyclin-dependent kinase 2; Molecular biology; Cell cycle; Protein kinase A; Biochemistry; Computer science","score_opus":0.04550373543333862,"score_gpt":0.4001570222713691,"score_spread":0.3546532868380305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409453722","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45200202,0.009875736,0.535745,0.00055920496,0.00039168616,0.000518748,0.0000031443815,0.00003064203,0.00087376207],"genre_scores_gemma":[0.16553217,0.00047309702,0.8336259,0.0001939244,0.000020847385,0.000043110118,0.000024182795,0.00002783748,0.000058923204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998293,0.0007157199,0.00033823107,0.00037347956,0.000084737694,0.00019485455],"domain_scores_gemma":[0.99921125,0.000089062974,0.00012683027,0.00034914885,0.000090370864,0.00013334592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012872039,0.00014072556,0.00039243052,0.00021355864,0.000015985099,0.0000042140455,0.00006600293,0.00027325726,0.000007125844],"category_scores_gemma":[0.0008842133,0.00012286936,0.000040267445,0.00020213272,0.00019491845,0.00002110106,0.000101602294,0.00021831508,0.0000011811809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013281005,0.0000587026,0.002876267,0.00004406773,0.000018467854,0.000024536654,0.00022472488,0.0000039425386,0.95674115,0.0011208593,0.000051547442,0.038702924],"study_design_scores_gemma":[0.0028045438,0.0007708736,0.0022183692,0.0001590604,0.000062549516,0.00013066542,0.00017458801,0.0004012181,0.9760927,0.010464315,0.0065442654,0.00017682787],"about_ca_topic_score_codex":0.00005622252,"about_ca_topic_score_gemma":0.0000043905598,"teacher_disagreement_score":0.29788086,"about_ca_system_score_codex":0.000047657224,"about_ca_system_score_gemma":0.00007824757,"threshold_uncertainty_score":0.5010467},"labels":[],"label_agreement":null},{"id":"W2409457110","doi":"10.1007/978-1-60761-588-0_23","title":"Preventing Immune Rejection Through Gene Silencing","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; London Health Sciences Centre; Western University","funders":"","keywords":"RELB; Gene silencing; Immune system; Cell biology; Transplantation; Immunology; Biology; Cancer research; Gene; Medicine; NFKB1; Transcription factor; Genetics","score_opus":0.01708606242780363,"score_gpt":0.3619111578778478,"score_spread":0.34482509545004414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409457110","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57855487,0.009079766,0.40824834,0.00011181228,0.0027075117,0.00022761237,0.0000030700576,0.00007847132,0.0009885307],"genre_scores_gemma":[0.36061138,0.0003100207,0.6371068,0.00037637964,0.00005285553,0.0000909668,0.0000681759,0.000053965414,0.0013294927],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99604875,0.0024225633,0.00054096646,0.00043476527,0.000019427447,0.0005335244],"domain_scores_gemma":[0.9987902,0.0004211587,0.00018474669,0.0005461409,0.000048329803,0.0000094014085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020794761,0.00023667135,0.00041867682,0.00019311316,0.00017438999,0.000012212887,0.00034642802,0.00062938884,0.0004869792],"category_scores_gemma":[0.0007600522,0.00022073567,0.00017605945,0.00029650933,0.00029358568,0.00007518957,0.00013958904,0.0009568032,0.00007514563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014520492,0.00007389046,0.0004169141,0.0000065300387,0.00009198814,0.0000066743783,0.00039842675,0.000004108734,0.9539635,0.0024845798,0.000008064188,0.042400077],"study_design_scores_gemma":[0.00087428844,0.00015635844,0.0015476536,0.000017121973,0.000017534985,0.00018378989,0.000096877346,0.0000064279716,0.97388643,0.0044952626,0.018480774,0.00023746493],"about_ca_topic_score_codex":0.00031586326,"about_ca_topic_score_gemma":0.000013847703,"teacher_disagreement_score":0.22885841,"about_ca_system_score_codex":0.000029530851,"about_ca_system_score_gemma":0.000061436076,"threshold_uncertainty_score":0.9001339},"labels":[],"label_agreement":null},{"id":"W2409473205","doi":"10.1007/978-1-62703-691-7_22","title":"Navigating the Global Protein–Protein Interaction Landscape Using iRefWeb","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Resource (disambiguation); Categorization; Computer science; Data collection; Protein–protein interaction; Data science; World Wide Web; Computational biology; Information retrieval; Biology; Genetics; Artificial intelligence","score_opus":0.016862135940986026,"score_gpt":0.3728538217895742,"score_spread":0.3559916858485882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409473205","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46800968,0.00048705965,0.5299475,0.00024724915,0.00013973778,0.00046607092,0.000003545272,0.000008587592,0.00069055124],"genre_scores_gemma":[0.49901098,0.000007716231,0.50008696,0.0005468491,0.00013653173,0.00012248861,0.00004224284,0.000017956378,0.000028277971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982638,0.0006091756,0.0003811183,0.00031126026,0.000057911417,0.0003767625],"domain_scores_gemma":[0.99927485,0.000019486239,0.0001702387,0.00041712058,0.00006267239,0.00005561435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077784644,0.0001984035,0.00019266475,0.00001739149,0.00009124551,0.00004726083,0.0003090294,0.00029690232,0.00004091775],"category_scores_gemma":[0.00015235433,0.00014706733,0.00010206472,0.00017670679,0.00011838547,0.0000062167915,0.0002565759,0.00036385586,0.000012294698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016555628,0.000017741797,0.0008014603,0.000010121483,0.00003397853,0.0000015699494,0.000030938892,0.00032281064,0.941498,0.0012161379,0.000022684733,0.056028046],"study_design_scores_gemma":[0.0018086432,0.0007244049,0.0007491165,0.00024567242,0.000050052164,0.00020836595,0.0009988861,0.071821354,0.82478964,0.08347341,0.013865765,0.0012647121],"about_ca_topic_score_codex":0.00021404111,"about_ca_topic_score_gemma":0.000025918496,"teacher_disagreement_score":0.11670833,"about_ca_system_score_codex":0.00003660697,"about_ca_system_score_gemma":0.000046613513,"threshold_uncertainty_score":0.59972316},"labels":[],"label_agreement":null},{"id":"W2409550653","doi":"10.1007/978-1-62703-071-7_14","title":"The MRL Model: An Invaluable Tool in Studies of Autoimmunity–Brain Interactions","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Autoimmunity; Neurodegeneration; Immune system; Immunology; Neuroscience; Neuroimmunology; Disease; Autoimmune disease; Systemic lupus erythematosus; Cerebrospinal fluid; Medicine; Antibody; Biology; Pathology","score_opus":0.29957357058799844,"score_gpt":0.5477822365472146,"score_spread":0.24820866595921615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409550653","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012256103,0.95954525,0.038564082,0.00012850408,0.00046108026,0.0006862711,0.000015762502,0.00002676739,0.00044969568],"genre_scores_gemma":[0.000021913724,0.91010416,0.08893775,0.00039980447,0.000015920696,0.0002953732,0.000009775147,0.00004241181,0.00017288627],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9864916,0.011576273,0.0008693179,0.00048534913,0.00009522159,0.0004822414],"domain_scores_gemma":[0.9941906,0.0045570876,0.0003693312,0.0008208582,0.000032648422,0.000029527091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003622762,0.00034487294,0.0012905835,0.00041461329,0.000108867076,0.000016975355,0.0009172951,0.0002879152,0.000013132495],"category_scores_gemma":[0.006251641,0.00023275394,0.00025816352,0.0007917774,0.0006146264,0.00008077121,0.00044575875,0.0008501975,0.000005340217],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008526209,0.000148913,0.000002312557,0.00075431075,0.00003598912,0.000006648739,0.00038324384,0.00007965332,0.022607308,0.016326424,0.000027271872,0.9596194],"study_design_scores_gemma":[0.00031993206,0.00014744887,0.0000020387838,0.001087298,0.00009110425,0.000038960177,0.00029470166,0.0011096763,0.0053229127,0.037233476,0.95383286,0.00051957526],"about_ca_topic_score_codex":0.000037062942,"about_ca_topic_score_gemma":0.000103853214,"teacher_disagreement_score":0.9590998,"about_ca_system_score_codex":0.00010977104,"about_ca_system_score_gemma":0.00015872109,"threshold_uncertainty_score":0.94914305},"labels":[],"label_agreement":null},{"id":"W2409567956","doi":"10.1007/978-1-4939-2428-8_12","title":"Randomized Controlled Trials 4: Biomarkers and Surrogate Outcomes","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Seven Oaks General Hospital; University of Manitoba","funders":"","keywords":"Biomarker; Surrogate endpoint; Medicine; Randomized controlled trial; Intensive care medicine; Clinical trial; Oncology; Internal medicine; Biology","score_opus":0.5007859743343175,"score_gpt":0.5749217027814585,"score_spread":0.074135728447141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409567956","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046752345,0.019758485,0.8947942,0.028196637,0.0015882298,0.0034422756,0.000064327054,0.00005455364,0.0053489287],"genre_scores_gemma":[0.024607055,0.00036888133,0.9614557,0.012009341,0.00010805432,0.00096170197,0.00003148434,0.00004780323,0.00040996334],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9633699,0.027876219,0.007649004,0.00062955613,0.00005054316,0.0004247599],"domain_scores_gemma":[0.97421974,0.0219433,0.0031197865,0.00043733162,0.00006641962,0.00021340203],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.32150877,0.00026013126,0.008112291,0.00065800024,0.000043809985,0.000045713365,0.0002133011,0.00030015456,0.00009804451],"category_scores_gemma":[0.2099775,0.00022721106,0.0005342729,0.00017360516,0.0002640701,0.000083825435,0.00008210218,0.00015886575,0.00009745777],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.02775249,0.0001781897,0.077820785,0.00015345508,0.0032186783,0.000013617749,0.002043603,0.00010823366,0.00075513154,0.88383526,0.0016412416,0.0024793108],"study_design_scores_gemma":[0.4909857,0.0000952588,0.00072946266,0.000030416097,0.00008282086,0.00000774333,0.0004922423,0.00598841,0.00014411389,0.49279106,0.008133711,0.0005190897],"about_ca_topic_score_codex":0.0006319638,"about_ca_topic_score_gemma":0.000027181923,"teacher_disagreement_score":0.4632332,"about_ca_system_score_codex":0.000167654,"about_ca_system_score_gemma":0.000113334274,"threshold_uncertainty_score":0.9265398},"labels":[],"label_agreement":null},{"id":"W2409569981","doi":"10.1007/978-1-4939-2013-6_28","title":"Establishment of Orthotopic Primary Cervix Cancer Xenografts","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hedgehog Signaling Pathway Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Cervix; Medicine; Cervical cancer; Cancer; Oncology; Biopsy; Metastasis; Radiation therapy; Cisplatin; Cancer research; Pathology; Chemotherapy; Internal medicine","score_opus":0.020254883418101145,"score_gpt":0.37537478489511933,"score_spread":0.35511990147701816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409569981","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31476,0.0037865844,0.67830646,0.00020734887,0.00045552308,0.00024440925,0.000014324165,0.00001436144,0.0022109984],"genre_scores_gemma":[0.34597775,0.0004665116,0.6516393,0.0011872189,0.00021892188,0.00018132609,0.00008393641,0.000047522706,0.00019754304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976664,0.0010153428,0.00040957166,0.000479648,0.00008047351,0.00034853534],"domain_scores_gemma":[0.99915254,0.00007526871,0.00014125725,0.00048168516,0.00009376471,0.000055491746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012333993,0.00020371214,0.0003996352,0.00012314622,0.000031541167,0.0000054900856,0.00029718023,0.00024822255,0.000019057785],"category_scores_gemma":[0.00045247842,0.00018996907,0.000121444005,0.00020200723,0.00019739656,0.0000016139961,0.00027204686,0.00013070722,0.0000014175291],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000279255,0.000052629006,0.018793633,0.000050553583,0.00006491652,0.000002457471,0.00005311416,0.000121002166,0.9542098,0.000633049,0.000063336585,0.025927607],"study_design_scores_gemma":[0.00055148016,0.00031181733,0.004285569,0.00002630103,0.00002256328,0.0000032974124,0.000021693651,0.00004556764,0.93008626,0.0008185373,0.06359371,0.00023323669],"about_ca_topic_score_codex":0.0001200383,"about_ca_topic_score_gemma":0.000057343364,"teacher_disagreement_score":0.06353038,"about_ca_system_score_codex":0.000024057397,"about_ca_system_score_gemma":0.0000707122,"threshold_uncertainty_score":0.7746714},"labels":[],"label_agreement":null},{"id":"W2409573130","doi":"10.1007/978-1-59745-102-4_17","title":"Solution Structure Probing of RNA Structures","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Computational biology; Computer science; Biology","score_opus":0.021445146224839503,"score_gpt":0.3396985624432791,"score_spread":0.3182534162184396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409573130","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3795921,0.0012056325,0.6185541,0.0000301244,0.00014918472,0.00017204622,0.000009164427,0.000006852481,0.00028077408],"genre_scores_gemma":[0.49242482,0.00007329185,0.50728786,0.00008653856,0.00004217078,0.0000123719765,0.000027072203,0.000015446214,0.000030424175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816436,0.000798745,0.0003123449,0.0003826307,0.00006867053,0.00027325196],"domain_scores_gemma":[0.9993514,0.000027647,0.00014235116,0.00038253085,0.00005462304,0.000041473933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042922513,0.00017672603,0.00027403064,0.000107939806,0.000051139286,0.0000028268717,0.00025422242,0.00037184817,0.000035945955],"category_scores_gemma":[0.000300862,0.00015952984,0.000103926104,0.00013769246,0.00017449247,0.0000020476773,0.000120277844,0.00012101941,6.160558e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048906197,0.000016495926,0.000516909,0.000014469912,0.000029875453,0.0000066878542,0.000051176685,0.000071881266,0.98460305,0.002088385,0.000017416958,0.012534776],"study_design_scores_gemma":[0.00027743154,0.00020165883,0.00034009488,0.00000777281,0.000007932742,0.000053023596,0.000012740914,0.000027988497,0.98335636,0.014189502,0.001358342,0.00016713567],"about_ca_topic_score_codex":0.000028086024,"about_ca_topic_score_gemma":0.000007024621,"teacher_disagreement_score":0.11283271,"about_ca_system_score_codex":0.0000114813265,"about_ca_system_score_gemma":0.00006124993,"threshold_uncertainty_score":0.65054375},"labels":[],"label_agreement":null},{"id":"W2409585704","doi":"10.1007/978-1-60327-009-0_9","title":"A Revised and Improved Method for the Isolation of Seminiferous Tubule-Enriched Fractions that Preserves the Phosphorylated and Glycosylated Forms of Proteins","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Seminiferous tubule; Tubule; Chemistry; Phosphorylation; Biochemistry; Cell biology; Biology; Endocrinology; Spermatogenesis; Kidney","score_opus":0.020158336745688836,"score_gpt":0.3597905718719552,"score_spread":0.33963223512626634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409585704","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21629329,0.00540676,0.77640265,0.00041038,0.00003123328,0.0013601443,0.000022178358,0.0000066052025,0.000066734035],"genre_scores_gemma":[0.5815144,0.0004408344,0.41762346,0.0001749793,0.000016183909,0.00015579404,0.000032987264,0.000013565484,0.000027778528],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984791,0.0005910955,0.00035033625,0.00031976876,0.000049230763,0.00021045654],"domain_scores_gemma":[0.99884,0.00036966958,0.0002627375,0.000387081,0.00010700977,0.000033540604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019266724,0.00016926845,0.00029510097,0.000055834247,0.00008284113,0.000011019619,0.00020158391,0.00027670793,0.000004181328],"category_scores_gemma":[0.0009099255,0.00010306644,0.00009412828,0.0001649557,0.00016633465,0.0000050180247,0.00009312264,0.00015424742,3.5590414e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031962962,0.000038048125,0.000396179,0.000036256715,0.0000758663,2.3609198e-7,0.00013294857,0.000014910378,0.9683583,0.0009950346,0.000004901272,0.02962774],"study_design_scores_gemma":[0.0008303075,0.0009457586,0.0020788151,0.000017526965,0.00005906373,0.000013263484,0.00010145163,0.0052886913,0.98198885,0.007739591,0.00081160286,0.00012507282],"about_ca_topic_score_codex":0.000046198067,"about_ca_topic_score_gemma":0.00001370871,"teacher_disagreement_score":0.3652211,"about_ca_system_score_codex":0.000005996057,"about_ca_system_score_gemma":0.000040580206,"threshold_uncertainty_score":0.42029276},"labels":[],"label_agreement":null},{"id":"W2409604727","doi":"10.1007/978-1-4939-2687-9_3","title":"Analysis of CRISPR Pre-crRNA Cleavage","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Trans-activating crRNA; CRISPR; Cleavage (geology); RNase P; Chemistry; Polyacrylamide gel electrophoresis; Biochemistry; Biology; RNA; Enzyme; Palindrome; Gene","score_opus":0.02116422241470006,"score_gpt":0.45943963107234526,"score_spread":0.4382754086576452,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409604727","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15491109,0.0020095238,0.8416747,0.00002629245,0.00014252018,0.00009939178,0.000009427966,0.000008038883,0.0011190287],"genre_scores_gemma":[0.5370006,0.00006636917,0.46255532,0.00012975263,0.000037419653,0.000018520937,0.00008237531,0.00001985753,0.000089779365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850374,0.00045198936,0.00034090583,0.0003730677,0.00006985101,0.0002604429],"domain_scores_gemma":[0.9992262,0.000032452634,0.000078450066,0.00050275563,0.000067707144,0.00009242848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010164651,0.00015622546,0.0003667278,0.0002906949,0.0000099194285,0.000004652497,0.00025322402,0.00023246504,0.000010392543],"category_scores_gemma":[0.00047093455,0.00015506678,0.00017641783,0.00055775914,0.0000903803,0.0000011526353,0.00015786996,0.000103120954,0.0000011107154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045203462,0.0000387244,0.013776648,0.000007791696,0.0003249269,0.000004411634,0.00008397674,0.006355551,0.9726215,0.0002699599,0.00006897231,0.0064023514],"study_design_scores_gemma":[0.00040949904,0.00026471907,0.005492819,0.0000035113258,0.00018633482,0.0000041549188,0.000058944068,0.0017119073,0.9850785,0.00044372384,0.0061510955,0.00019474818],"about_ca_topic_score_codex":0.00006773279,"about_ca_topic_score_gemma":0.000037015318,"teacher_disagreement_score":0.38208953,"about_ca_system_score_codex":0.000013159883,"about_ca_system_score_gemma":0.000043356802,"threshold_uncertainty_score":0.63234395},"labels":[],"label_agreement":null},{"id":"W2409627995","doi":"10.1007/978-1-62703-974-1_8","title":"SEM Analysis of Marine Invertebrate Gametes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect and Arachnid Ecology and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Francis Xavier University","funders":"","keywords":"Marine invertebrates; Fixation (population genetics); Nanotechnology; Biology; Materials science; Ecology; Genetics","score_opus":0.013832595060531775,"score_gpt":0.35146542470425135,"score_spread":0.3376328296437196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409627995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66686636,0.00009990723,0.3318919,0.000034461304,0.00010605957,0.00006967396,0.0000050939325,0.000006125877,0.00092039985],"genre_scores_gemma":[0.7300149,0.00003646923,0.26896775,0.0005384841,0.00003187587,0.000025480003,0.00019583276,0.000013167219,0.00017602197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980989,0.0009287904,0.0003200727,0.0003579358,0.000035463687,0.00025883043],"domain_scores_gemma":[0.9993516,0.00006053276,0.00011554613,0.0003804746,0.00005100755,0.00004081786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010803216,0.00015096366,0.0004079667,0.0002960329,0.000027517612,0.000003477708,0.00021948639,0.00031756388,0.00012348052],"category_scores_gemma":[0.00030775525,0.00013756049,0.00020846078,0.0004735033,0.00017269094,0.0000014826661,0.00018241779,0.00011901055,0.0000026488733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029580136,0.00006104112,0.14291018,0.0000055415444,0.00020401535,0.0000018568057,0.000012563915,0.0000890752,0.8416862,0.0014537883,0.000011269722,0.01353487],"study_design_scores_gemma":[0.00035417586,0.0003678719,0.020104207,0.000002067554,0.0002772555,0.0000030789438,0.000010406928,0.0016047878,0.97376686,0.0019989496,0.0013211059,0.00018923877],"about_ca_topic_score_codex":0.000049463095,"about_ca_topic_score_gemma":0.00016716996,"teacher_disagreement_score":0.13208064,"about_ca_system_score_codex":0.00000622327,"about_ca_system_score_gemma":0.000021004542,"threshold_uncertainty_score":0.5609554},"labels":[],"label_agreement":null},{"id":"W2409630622","doi":"10.1007/978-1-59745-530-5_1","title":"Study Design: The Basics","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Statistical Methods in Clinical Trials","field":"Mathematics","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Health Authority","funders":"","keywords":"Blinding; Management science; Research design; Computer science; Interpretation (philosophy); Clinical study design; Data science; Selection (genetic algorithm); Artificial intelligence; Medicine; Statistics; Engineering; Mathematics; Clinical trial; Pathology","score_opus":0.859952979431288,"score_gpt":0.7398574072820376,"score_spread":0.12009557214925037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409630622","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[2.6842415e-8,0.45989636,0.5363058,0.000012410974,0.00075102854,0.0024738468,0.000012178046,0.000037601156,0.00051078154],"genre_scores_gemma":[6.6225274e-9,0.43381944,0.56544584,0.00010356376,0.00014403128,0.00035419053,0.0000015757373,0.000084947606,0.00004641395],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.90909463,0.08527256,0.0032905522,0.0011999215,0.00029819793,0.0008441446],"domain_scores_gemma":[0.75845873,0.23900442,0.0007747865,0.0015869765,0.000076781085,0.000098324876],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.06932328,0.0007611046,0.004781581,0.00034082672,0.00007953036,0.00003422563,0.0016595653,0.0013316107,0.00012011328],"category_scores_gemma":[0.23416583,0.00044348213,0.00080080476,0.0011282564,0.00048087872,0.0000098021355,0.0006383172,0.0020850063,0.000038119942],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011400669,0.0002685332,0.0000020366483,0.00093738677,0.00028476902,0.00018024462,0.000039954874,2.1820918e-7,0.0000026218156,0.102381274,0.000048974787,0.8958426],"study_design_scores_gemma":[0.00026390416,0.00027587864,3.3586775e-7,0.00063831074,0.00093854894,0.000025342273,0.000026217802,0.000002644364,0.00001763017,0.64562696,0.35184228,0.00034192624],"about_ca_topic_score_codex":0.000005524633,"about_ca_topic_score_gemma":0.0000027689302,"teacher_disagreement_score":0.89550066,"about_ca_system_score_codex":0.00014387156,"about_ca_system_score_gemma":0.00022897676,"threshold_uncertainty_score":0.9999649},"labels":[],"label_agreement":null},{"id":"W2409631120","doi":"10.1007/978-1-4939-3167-5_15","title":"Analysis of Genotyping-by-Sequencing (GBS) Data","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Plant Biotechnology Institute; National Research Council Canada","funders":"","keywords":"Genotyping; Leverage (statistics); Computational biology; Biology; Genome; Raw data; Genetic data; Reference genome; Whole genome sequencing; Genetics; Computer science; Genotype; Machine learning; Medicine; Gene; Population","score_opus":0.07731184573418602,"score_gpt":0.41005325835053036,"score_spread":0.3327414126163443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409631120","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3564384,0.009014185,0.63319725,0.000057168272,0.00014804571,0.00011723455,0.000122006924,0.0000028231368,0.0009028955],"genre_scores_gemma":[0.47942078,0.00028462103,0.51936483,0.00029895586,0.00003995776,0.000013669059,0.00050599733,0.000021464459,0.00004974151],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812907,0.00060414674,0.0003699809,0.0005649184,0.000065211934,0.0002666487],"domain_scores_gemma":[0.99863255,0.00004396948,0.00013592781,0.0010163682,0.00009787149,0.000073301424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016035456,0.00016256115,0.00041781712,0.00018019332,0.000020165278,0.0000055882047,0.0006136068,0.00019327881,0.0000054511884],"category_scores_gemma":[0.00063692674,0.00015729318,0.000098861594,0.00045177544,0.00015088906,6.4918976e-7,0.00066667993,0.00008238426,8.667804e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025540674,0.00002336934,0.015859127,0.0000043825717,0.00063198665,0.0000019923239,0.0000610544,0.00066641794,0.9782803,0.0002212279,0.00012422181,0.004100352],"study_design_scores_gemma":[0.00086903723,0.00041588666,0.0025294984,0.000006195353,0.0006199652,0.0000067983847,0.00028709057,0.0036972822,0.9508663,0.0021982118,0.03799273,0.0005110479],"about_ca_topic_score_codex":0.0001779978,"about_ca_topic_score_gemma":0.00008053749,"teacher_disagreement_score":0.122982375,"about_ca_system_score_codex":0.000023029408,"about_ca_system_score_gemma":0.00010580716,"threshold_uncertainty_score":0.641423},"labels":[],"label_agreement":null},{"id":"W2409712502","doi":"10.1007/978-1-4939-7274-6_3","title":"Detecting Pedigree Relationship Errors","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"False positive paradox; Linkage (software); Computer science; Genetic association; Genome-wide association study; Data mining; Computational biology; Biology; Artificial intelligence; Genetics; Genotype; Gene; Single-nucleotide polymorphism","score_opus":0.061018927955992716,"score_gpt":0.43981312348684726,"score_spread":0.3787941955308545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409712502","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42935258,0.00038791384,0.56557924,0.0004929288,0.00033259072,0.00012963019,0.000004002537,0.000010271732,0.0037108653],"genre_scores_gemma":[0.5382687,0.000027720767,0.46109784,0.00021990523,0.00009342443,0.000033069842,0.000023206907,0.000016964565,0.00021916066],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99757993,0.0010902156,0.00036655337,0.00050295814,0.00004528912,0.0004150657],"domain_scores_gemma":[0.998496,0.0001462221,0.0002974981,0.0009322618,0.000060855513,0.00006716566],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.002271982,0.00017568655,0.00026881808,0.000094100054,0.0003134074,0.000023350693,0.00050626445,0.00046543792,0.000016069123],"category_scores_gemma":[0.008509132,0.00017649974,0.00012575615,0.00006189791,0.00020927218,0.0000030142105,0.00031534478,0.00023787926,0.000010576324],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014126765,0.000018835995,0.55867255,0.0000041896305,0.00002674601,0.0000046666514,0.000030568695,0.00010072083,0.4264721,0.0011336736,0.000051824354,0.013470031],"study_design_scores_gemma":[0.0013353681,0.00042964035,0.8378578,0.000017520762,0.000044002343,0.00004721819,0.00017434549,0.00072967913,0.10222886,0.041957486,0.014475999,0.0007021202],"about_ca_topic_score_codex":0.00010519283,"about_ca_topic_score_gemma":0.00015721243,"teacher_disagreement_score":0.32424322,"about_ca_system_score_codex":0.00002350169,"about_ca_system_score_gemma":0.000056433197,"threshold_uncertainty_score":0.99984264},"labels":[],"label_agreement":null},{"id":"W2409732477","doi":"10.1007/978-1-60761-611-5_9","title":"Quantification of Fungal Infection of Leaves with Digital Images and Scion Image Software","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Powdery mildew; Chlorosis; Digital image analysis; Biology; Digital image; Horticulture; Artificial intelligence; Image processing; Computer vision; Image (mathematics); Computer science","score_opus":0.009545993719086458,"score_gpt":0.32100829230250555,"score_spread":0.3114622985834191,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409732477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60613704,0.0002229465,0.39330518,0.0000071956006,0.000036730205,0.000072694485,0.0001334525,0.0000038771027,0.00008084699],"genre_scores_gemma":[0.7248662,0.00006983617,0.2748914,0.000010684256,0.000015157357,0.000008415063,0.000118041135,0.000009722178,0.000010534492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992491,0.00014987178,0.000189798,0.00025372283,0.00003979807,0.00011773077],"domain_scores_gemma":[0.99951226,0.000042265903,0.000117543466,0.00020955592,0.000084886684,0.00003351162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028496946,0.00010561763,0.00016981324,0.000087952656,0.000018167726,0.000008520048,0.00007099275,0.00014287875,0.000003337169],"category_scores_gemma":[0.00046900276,0.0000882334,0.000045019144,0.000091141985,0.00028920325,0.0000062583836,0.00005890485,0.00008658736,2.659206e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008396866,0.000052243267,0.13612807,0.000031669115,0.000017629845,0.0000023552327,0.0000059290433,0.00000553414,0.8538752,0.00022918046,0.0000035497528,0.009564681],"study_design_scores_gemma":[0.00024683707,0.00029562894,0.087266326,0.000010903497,0.00001616725,0.000028003531,0.000008397772,0.000018041588,0.91145295,0.00035451204,0.00020080866,0.00010140227],"about_ca_topic_score_codex":0.000022402883,"about_ca_topic_score_gemma":0.000019766221,"teacher_disagreement_score":0.11872916,"about_ca_system_score_codex":0.000001927072,"about_ca_system_score_gemma":0.000034411354,"threshold_uncertainty_score":0.35980535},"labels":[],"label_agreement":null},{"id":"W2409740514","doi":"10.1007/978-1-4939-3393-8_15","title":"Knockdown of Polyphenol Oxidase Gene Expression in Potato (Solanum tuberosum L.) with Artificial MicroRNAs","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Gene knockdown; Gene silencing; Polyphenol oxidase; Biology; Gene expression; Browning; Gene; microRNA; Population; Solanum tuberosum; Biotechnology; Biochemistry; Botany; Enzyme; Peroxidase","score_opus":0.035091101035334374,"score_gpt":0.346215996703692,"score_spread":0.31112489566835766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409740514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9774483,0.0005180899,0.020866442,0.00065438834,0.000043967357,0.00023106486,0.00012947596,0.000015807302,0.000092471724],"genre_scores_gemma":[0.6414338,0.0002714158,0.35776863,0.00019587048,0.00008143698,0.000105286585,0.000040334515,0.0000044081294,0.00009885499],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99758184,0.0011436023,0.0003216635,0.00039294572,0.000110365225,0.00044957318],"domain_scores_gemma":[0.9990972,0.00060549326,0.000090516165,0.00009897064,0.000046524117,0.00006125161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008710659,0.00016120473,0.0003433682,0.00006387176,0.000041460822,0.000006953216,0.00028969892,0.00014576527,0.00008065057],"category_scores_gemma":[0.00040630292,0.00004950062,0.000053844084,0.00036268317,0.0002434548,0.000032303382,0.00020260699,0.00013106741,0.000005723461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018614059,0.00007837956,0.009788167,0.0000038632493,0.000010416437,0.000039069026,0.000031520034,0.0000010857896,0.94725966,0.00009517517,0.000017439852,0.042489048],"study_design_scores_gemma":[0.0002482408,0.00029956072,0.011281917,0.000052179497,0.0000026893506,0.000008354188,0.000051802035,0.000004204334,0.98547655,0.0016388573,0.00079325755,0.00014237985],"about_ca_topic_score_codex":0.00030252314,"about_ca_topic_score_gemma":0.00052632275,"teacher_disagreement_score":0.3369022,"about_ca_system_score_codex":0.00003130609,"about_ca_system_score_gemma":0.000014040949,"threshold_uncertainty_score":0.20185767},"labels":[],"label_agreement":null},{"id":"W2409748693","doi":"10.1007/978-1-60761-588-0_25","title":"Direct Application of siRNA for In Vivo Pain Research","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Novelty; Neuroscience; Medicine; Nociception; Small interfering RNA; Chronic pain; In vivo; Population; Bioinformatics; Morphine; Biology; Pharmacology; RNA; Psychology; Biotechnology; Internal medicine","score_opus":0.037390372911111705,"score_gpt":0.4516835013825946,"score_spread":0.4142931284714829,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409748693","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37429857,0.00025795255,0.6238315,0.00007764064,0.000099462144,0.00034247563,0.0000116987385,0.0000031672616,0.0010775034],"genre_scores_gemma":[0.6304369,0.000054046846,0.36881438,0.00015045342,0.000068175854,0.00029696545,0.00004228941,0.000017993249,0.00011876707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99783,0.0011247679,0.000293232,0.00040428294,0.0000530273,0.00029469366],"domain_scores_gemma":[0.9991104,0.00023385615,0.000062950334,0.00042276466,0.00013761721,0.00003240158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0055240765,0.0001044314,0.00020548262,0.00020497626,0.000020308034,0.000004302439,0.0003072421,0.00033274075,0.000009582581],"category_scores_gemma":[0.0015436646,0.00010163532,0.00007783864,0.00021940735,0.00016814478,0.0000014669712,0.000103817554,0.00020497426,9.864684e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008071262,0.00005869901,0.003922708,0.000015997799,0.000010860998,9.128896e-7,0.00002368509,0.000016324737,0.96614385,0.0010742174,0.00009347348,0.028558534],"study_design_scores_gemma":[0.00029723535,0.0003697822,0.00024383562,0.0000061915,0.0000023610742,0.0000015140128,0.000030042891,0.00042063408,0.9716436,0.004160898,0.022720525,0.00010337769],"about_ca_topic_score_codex":0.00013529503,"about_ca_topic_score_gemma":0.00038523177,"teacher_disagreement_score":0.25613835,"about_ca_system_score_codex":0.0000092561795,"about_ca_system_score_gemma":0.000052726864,"threshold_uncertainty_score":0.4144568},"labels":[],"label_agreement":null},{"id":"W2409849313","doi":"10.1007/978-1-62703-465-4_16","title":"Functional Identification of Bacterial Glucosyltransferase WbdN","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Glycosyltransferase; Nucleotide sugar; Biochemistry; Glucosyltransferase; Enzyme; Glucosyltransferases; Escherichia coli; Chemistry; Recombinant DNA; Nucleotide; Bacteria; Substrate (aquarium); Bacterial outer membrane; Gene; Biology; Genetics","score_opus":0.021842089449951873,"score_gpt":0.3743175881155579,"score_spread":0.352475498665606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409849313","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4923346,0.000443843,0.5064189,0.00011247706,0.00017793884,0.000239496,0.0000091028305,0.0000055497576,0.00025811777],"genre_scores_gemma":[0.7174084,0.00022764131,0.28127202,0.00017293518,0.00013638055,0.00031961754,0.00021295456,0.000027766537,0.00022229723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980629,0.00085100357,0.000381724,0.00036330597,0.00008115353,0.00025989345],"domain_scores_gemma":[0.99930763,0.00006287713,0.00007792229,0.0003390107,0.0001642536,0.000048325222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083395327,0.00013625233,0.0002091333,0.00010170609,0.00003122476,0.00001039753,0.00019817257,0.0001876781,0.00015237794],"category_scores_gemma":[0.00060036674,0.00012873848,0.00009352727,0.00017521981,0.00021387305,0.0000037346517,0.00012818997,0.00011629006,0.000010870194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052936684,0.00006234871,0.001766108,0.000015377158,0.00005352503,8.9113826e-7,0.000022859844,0.000020800595,0.9898642,0.0007360083,0.00012407303,0.0072808857],"study_design_scores_gemma":[0.0004666908,0.00018081313,0.0077464283,0.0000036241486,0.0000075211015,0.0000033261888,0.000036332025,0.000093197916,0.9873542,0.0020610183,0.0019166764,0.00013013704],"about_ca_topic_score_codex":0.00006360384,"about_ca_topic_score_gemma":0.000018993867,"teacher_disagreement_score":0.22514686,"about_ca_system_score_codex":0.000014408481,"about_ca_system_score_gemma":0.000062298815,"threshold_uncertainty_score":0.5249803},"labels":[],"label_agreement":null},{"id":"W2409888260","doi":"10.1007/978-1-4939-2428-8_20","title":"Clinical Genetic Research 1: Bias","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"BRCA gene mutations in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Evolutionary biology; Psychology; Biology","score_opus":0.2782694458863818,"score_gpt":0.5775988599825098,"score_spread":0.299329414096128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409888260","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2799989,0.004684657,0.70959866,0.00040788957,0.00090897764,0.00031541096,0.000006405669,0.00001702044,0.0040620985],"genre_scores_gemma":[0.070098795,0.00021359857,0.92804176,0.0006684947,0.0003666504,0.00012219689,0.00004321961,0.000044560304,0.0004007278],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9919805,0.005990129,0.00056201936,0.00076824153,0.0001650514,0.0005340672],"domain_scores_gemma":[0.99834555,0.00020217306,0.00008349563,0.0008626202,0.0003227535,0.00018339828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008501491,0.00017517451,0.0002823586,0.0002254543,0.000045244644,0.000018151637,0.000535651,0.0005225199,0.000023113298],"category_scores_gemma":[0.0036060393,0.00017207478,0.00012207548,0.0004829214,0.00054743706,0.0000016974491,0.0004424322,0.0004397835,0.000043916047],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014372478,0.00017063023,0.06850491,0.000010277065,0.00009392456,0.000051231113,0.0001141476,0.0004736652,0.79138416,0.0016973227,0.0049344953,0.13242152],"study_design_scores_gemma":[0.0024398533,0.001751192,0.007729028,0.0000177639,0.00002505267,0.00009472998,0.0003282748,0.00047739097,0.43567204,0.0509653,0.4998466,0.00065277435],"about_ca_topic_score_codex":0.000047581474,"about_ca_topic_score_gemma":0.000042269647,"teacher_disagreement_score":0.49491212,"about_ca_system_score_codex":0.00009762158,"about_ca_system_score_gemma":0.0005983882,"threshold_uncertainty_score":0.70170057},"labels":[],"label_agreement":null},{"id":"W2409896734","doi":"10.1007/978-1-60761-863-8_10","title":"High-Throughput and Reliable Protocols for Animal MicroRNA Library Cloning","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"microRNA; RNA; Computational biology; Small RNA; Biology; Computer science; Gene; Molecular biology; Genetics","score_opus":0.014642133537784164,"score_gpt":0.37101076226408747,"score_spread":0.3563686287263033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409896734","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5763767,0.00051959476,0.41778037,0.00034863062,0.00019754263,0.004529693,0.000036638987,0.000031111125,0.00017975346],"genre_scores_gemma":[0.036275554,0.000017329345,0.9602844,0.00039168674,0.00018660922,0.0024862299,0.0002066136,0.00005480616,0.00009675859],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841464,0.00027161854,0.00031312852,0.0006099748,0.00003756379,0.00035309492],"domain_scores_gemma":[0.9992655,0.000052851912,0.00011991621,0.00043688295,0.00004280515,0.00008203151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062265125,0.00020675418,0.0002516042,0.00008620915,0.000062011015,0.000031895604,0.00022740578,0.00043726747,0.000024881023],"category_scores_gemma":[0.00033703132,0.00020688649,0.000085236534,0.00011251134,0.000179682,0.000007903617,0.0002367327,0.00019212556,0.0000013878267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019829253,0.000041178402,0.00290228,0.00004352116,0.000025701755,0.0000032037622,0.000010240886,0.000010073518,0.9885215,0.0046441453,0.00027065692,0.0033291914],"study_design_scores_gemma":[0.0008603109,0.0003189481,0.0013856723,0.000014502865,0.000012236488,0.000020526259,0.0000053499057,0.00011272559,0.9186137,0.006397092,0.07202763,0.00023131368],"about_ca_topic_score_codex":0.000011837989,"about_ca_topic_score_gemma":0.0000057941547,"teacher_disagreement_score":0.542504,"about_ca_system_score_codex":0.0000069753382,"about_ca_system_score_gemma":0.00008556207,"threshold_uncertainty_score":0.84365857},"labels":[],"label_agreement":null},{"id":"W2409915377","doi":"10.1007/978-1-59745-194-9_4","title":"Electrode Assemblies Used for Electroporation of Cultured Cells","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Inactivation Methods","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Electroporation; Materials science; Lucifer yellow; Electrode; Indium tin oxide; Fluorescence; Cuvette; Fluorescence microscope; Nanotechnology; Biophysics; Intracellular; Chemistry; Optics; Gap junction; Biology; Biochemistry","score_opus":0.02793588417522193,"score_gpt":0.4015436009196206,"score_spread":0.3736077167443987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409915377","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16945016,0.00034860446,0.82949615,0.000066932604,0.0000977242,0.0003663136,0.000010779314,0.000009912962,0.00015344658],"genre_scores_gemma":[0.043704428,0.00011860653,0.95537335,0.00021510055,0.000068992704,0.000055610304,0.00022440677,0.000030420617,0.00020906547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976772,0.0010993624,0.00041633443,0.0004341867,0.00005546621,0.0003174631],"domain_scores_gemma":[0.99912375,0.00009065453,0.00021744728,0.0003514977,0.00017934221,0.000037284746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001047232,0.00018927612,0.0003398427,0.00014691256,0.000051464307,0.0000044702765,0.0002224408,0.00035893897,0.000010080595],"category_scores_gemma":[0.00066451624,0.00018532423,0.00014965162,0.00026492335,0.00014645599,0.0000038123358,0.000053925796,0.00012257126,7.00876e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011181576,0.000063636544,0.0003114615,0.000015605681,0.00004153908,0.000001117632,0.00005441614,0.00008215051,0.9964551,0.0016604118,0.00037781437,0.000824962],"study_design_scores_gemma":[0.0006097918,0.00050218246,0.000049886043,0.0000028430973,0.000011967176,0.000013665883,0.00001675159,0.00007970732,0.9829361,0.0020218263,0.013567271,0.00018804189],"about_ca_topic_score_codex":0.000018216719,"about_ca_topic_score_gemma":0.000013269555,"teacher_disagreement_score":0.12587725,"about_ca_system_score_codex":0.000028806231,"about_ca_system_score_gemma":0.00011197315,"threshold_uncertainty_score":0.7557303},"labels":[],"label_agreement":null},{"id":"W2409931244","doi":"10.1007/978-1-4939-3136-1_10","title":"High-Throughput DNA Array for SNP Detection of KRAS Gene Using a Centrifugal Microfluidic Device","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Chip; Microfluidics; SNP; Molecular Inversion Probe; DNA; genomic DNA; Microfluidic chip; Single-nucleotide polymorphism; Materials science; Computational biology; Biology; Nanotechnology; Genetics; Gene; Computer science","score_opus":0.03415099342882187,"score_gpt":0.3417162130580764,"score_spread":0.30756521962925454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409931244","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20538081,0.04807376,0.74597305,0.000015681859,0.00020318314,0.00027560268,0.000013358056,0.00003997472,0.000024595282],"genre_scores_gemma":[0.097096555,0.0056133866,0.8968854,0.0000928426,0.00009403389,0.000109281005,0.000043177733,0.000059662663,0.000005640402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867785,0.00028859964,0.0003770808,0.00027011533,0.00005261774,0.00033376418],"domain_scores_gemma":[0.9994128,0.000075285694,0.00006623643,0.00029089407,0.000088661334,0.00006615923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000688769,0.0001725658,0.00033157397,0.0001539245,0.000031896336,0.0000059605145,0.00017089116,0.00022824401,0.000005784141],"category_scores_gemma":[0.00011083632,0.0001821387,0.00008553194,0.00035432723,0.000067895424,0.000021828017,0.00002655074,0.00012688518,0.000002238071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002218629,0.000019967665,0.000031298416,0.000028720804,0.000047520993,0.0000011677905,0.00006118003,0.000126975,0.9958676,0.00052965997,0.0001568862,0.0031068434],"study_design_scores_gemma":[0.00048342295,0.00008402312,0.000013535381,0.000006898968,0.000033816646,0.000018042692,0.000027195549,0.0003851079,0.9689742,0.003311729,0.02649491,0.00016715525],"about_ca_topic_score_codex":0.00008030355,"about_ca_topic_score_gemma":0.000002604571,"teacher_disagreement_score":0.15091239,"about_ca_system_score_codex":0.00014518961,"about_ca_system_score_gemma":0.000056222376,"threshold_uncertainty_score":0.74274004},"labels":[],"label_agreement":null},{"id":"W2409936530","doi":"10.1007/978-1-62703-730-3_14","title":"Construction and Application of Riboswitch-Based Sensors That Detect Metabolites Within Bacterial Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Riboswitch; Computational biology; Flexibility (engineering); Construct (python library); Blueprint; Computer science; Biological system; Nanotechnology; Biology; RNA; Chemistry; Cell biology; Gene; Engineering; Genetics; Non-coding RNA; Materials science; Mathematics","score_opus":0.010442431561489817,"score_gpt":0.29615643132109937,"score_spread":0.28571399975960954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409936530","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4264813,0.00030216653,0.57275254,0.000029346125,0.0001130401,0.000278835,0.000005252734,0.000008685907,0.000028817212],"genre_scores_gemma":[0.32076597,0.00003560213,0.67895687,0.000067710906,0.000028706214,0.00009871268,0.000021215166,0.000019849716,0.000005361763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981347,0.00094073586,0.0002913283,0.00038969252,0.00005168727,0.0001918726],"domain_scores_gemma":[0.99930483,0.00006716686,0.00019290636,0.00032602763,0.000058785576,0.000050310242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007155576,0.00016883027,0.000277012,0.000098039345,0.0000233758,0.000011537787,0.00013003369,0.00030540803,0.000019123368],"category_scores_gemma":[0.00016591213,0.00015285765,0.000069532754,0.00009403296,0.00021230298,0.0000034304915,0.00006026035,0.00007422242,0.0000017442159],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004665476,0.000013389332,0.0006781919,0.000017764967,0.000023914388,3.8863539e-7,0.000011887178,0.000039322458,0.96341676,0.0005521285,0.000001534304,0.03519805],"study_design_scores_gemma":[0.0003703832,0.00014912646,0.00018303607,0.000006111225,0.000018913337,0.0000074713125,0.000030664214,0.00029328503,0.992647,0.005059488,0.0010753124,0.0001592136],"about_ca_topic_score_codex":0.000091102185,"about_ca_topic_score_gemma":0.000005670893,"teacher_disagreement_score":0.10620431,"about_ca_system_score_codex":0.0000061391543,"about_ca_system_score_gemma":0.000030313136,"threshold_uncertainty_score":0.6233354},"labels":[],"label_agreement":null},{"id":"W2409941786","doi":"10.1007/978-1-61779-927-3_12","title":"Magic Angle Spinning Solid-State NMR Experiments for Structural Characterization of Proteins","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced NMR Techniques and Applications","field":"Chemistry","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Magic angle spinning; Solid-state nuclear magnetic resonance; Characterization (materials science); Microcrystalline; Crystallography; Chemistry; Spinning; Materials science; Chemical physics; Nanotechnology; Nuclear magnetic resonance; Nuclear magnetic resonance spectroscopy; Physics; Stereochemistry; Polymer chemistry","score_opus":0.03457726336120218,"score_gpt":0.44502863456285024,"score_spread":0.41045137120164804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409941786","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2867059,0.00009325636,0.7127887,0.000016551385,0.0000137172065,0.00019837417,0.000023304496,0.00002543538,0.00013475887],"genre_scores_gemma":[0.19675307,0.00000820264,0.80269843,0.000050339913,0.000029661796,0.00028840115,0.00010308292,0.000017109418,0.00005170707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926525,0.00006391706,0.00024208197,0.00016633284,0.000028505954,0.00023389804],"domain_scores_gemma":[0.9995492,0.000028658493,0.00014614814,0.00020784637,0.000036869314,0.000031296462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019644346,0.00010251011,0.00018006055,0.000046243047,0.000026081885,0.0000031644965,0.000119827004,0.00009951433,0.000040326486],"category_scores_gemma":[0.00007139844,0.000097769385,0.00004857834,0.00008613659,0.00005508681,0.00004105672,0.000054613116,0.00007654822,4.7460546e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011561431,0.000023688377,0.0011386084,0.00003191431,0.0000074037407,1.7168966e-7,0.00009241005,0.000009129671,0.98363054,0.0023711796,5.2053423e-7,0.012682877],"study_design_scores_gemma":[0.00017128063,0.000022948361,0.00020234271,0.000013328019,0.00000474738,0.000001990867,0.000015601116,0.0005551298,0.9885146,0.008465326,0.0019314438,0.00010127326],"about_ca_topic_score_codex":0.0000049386017,"about_ca_topic_score_gemma":1.6285232e-7,"teacher_disagreement_score":0.089952834,"about_ca_system_score_codex":0.000029115365,"about_ca_system_score_gemma":0.000008290475,"threshold_uncertainty_score":0.39869198},"labels":[],"label_agreement":null},{"id":"W2409948793","doi":"10.1007/978-1-62703-386-2_1","title":"Large-Scale Characterization of the Murine Cardiac Proteome","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Proteome; Biology; Computational biology; Cardiac muscle; Cardiac function curve; Western blot; Bioinformatics; Cell biology; Heart failure; Medicine; Internal medicine; Genetics; Endocrinology; Gene","score_opus":0.02729502359719004,"score_gpt":0.4106868931999021,"score_spread":0.38339186960271204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2409948793","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000041674488,0.3979358,0.6003483,0.00001602388,0.00004893919,0.0010033284,0.00016344448,0.000028783423,0.0004136783],"genre_scores_gemma":[2.576508e-7,0.52095956,0.47660542,0.000011563106,0.00003217428,0.0019459265,0.00018869783,0.000033147306,0.00022324707],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99824405,0.0004920128,0.0005885633,0.0003897689,0.000050818984,0.00023481614],"domain_scores_gemma":[0.9984366,0.00007127436,0.00053960737,0.00087989133,0.000045686786,0.000026894146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044519422,0.00026248884,0.0010432013,0.000069709575,0.00003383134,0.0000055595756,0.00053802243,0.0005630163,0.00010098612],"category_scores_gemma":[0.00009359441,0.00018135399,0.0003858996,0.00029128088,0.00009727451,0.000013164917,0.00033603408,0.00048328744,0.000003986903],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[6.227635e-7,0.00002975342,0.000009319622,0.0021852371,0.000029308982,2.4812854e-7,0.000010891633,1.4138008e-7,0.6116626,0.0014355482,0.0000015217546,0.38463476],"study_design_scores_gemma":[0.00004038436,0.000005769365,7.8033594e-7,0.00074577954,0.000069407564,0.000002133135,0.0000020302623,0.0000065031404,0.21108635,0.0028070998,0.78506744,0.00016633127],"about_ca_topic_score_codex":0.0000050284348,"about_ca_topic_score_gemma":2.6760318e-7,"teacher_disagreement_score":0.7850659,"about_ca_system_score_codex":0.00005907313,"about_ca_system_score_gemma":0.00006028697,"threshold_uncertainty_score":0.7395401},"labels":[],"label_agreement":null},{"id":"W2410042075","doi":"10.1007/978-1-4939-1755-6_6","title":"Characterization of the Interaction Between the Prostaglandin D2 DP1 Receptor and the Intracellular l-Prostaglandin D Synthase","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Immunoprecipitation; Prostaglandin E2 receptor; Intracellular; G protein-coupled receptor; Receptor; Prostaglandin; Endogeny; Recombinant DNA; Chemistry; Prostaglandin D2; Cell biology; Biochemistry; Biology; Gene","score_opus":0.01344278200297359,"score_gpt":0.30968625498329533,"score_spread":0.2962434729803217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410042075","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57638973,0.00017012517,0.42224583,0.0005204837,0.00024655156,0.00036809655,0.000010613699,0.0000036673957,0.00004491255],"genre_scores_gemma":[0.97951245,0.00013327134,0.019576676,0.00030570992,0.0001891785,0.00007912237,0.00010890045,0.000023813978,0.00007088686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99634194,0.0026742858,0.00036914757,0.00032288127,0.00008063241,0.00021108067],"domain_scores_gemma":[0.99901026,0.0002045431,0.00025820103,0.00044458892,0.000052509225,0.000029918336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002862238,0.00016949896,0.000265166,0.000045550798,0.00012098796,0.000024928166,0.00031787626,0.00021687572,0.000022730657],"category_scores_gemma":[0.00071416446,0.00008490188,0.00010712956,0.0001612983,0.00032489715,0.000004142924,0.00021350537,0.00023308952,9.158583e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108406944,0.000012918043,0.0035110048,0.0000121012745,0.000036760695,1.4299381e-7,0.00014874617,0.000009964241,0.98278946,0.0022253408,0.000004969985,0.01114021],"study_design_scores_gemma":[0.00072457263,0.00013743246,0.00061048975,0.000021720896,0.00003078715,0.0000054100265,0.00008351703,0.0004410654,0.98733765,0.001539939,0.008951791,0.00011560754],"about_ca_topic_score_codex":0.00003832792,"about_ca_topic_score_gemma":0.000005625581,"teacher_disagreement_score":0.40312272,"about_ca_system_score_codex":0.000012081091,"about_ca_system_score_gemma":0.00002176226,"threshold_uncertainty_score":0.34621984},"labels":[],"label_agreement":null},{"id":"W2410049261","doi":"10.1007/978-1-61737-992-5_14","title":"Longitudinal Functional Magnetic Resonance Imaging in Animal Models","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced MRI Techniques and Applications","field":"Medicine","cited_by":88,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre","funders":"National Institutes of Health","keywords":"Interpretability; Functional magnetic resonance imaging; Neuroscience; Neuroimaging; Perception; Cognition; Psychology; Function (biology); Brain function; Cognitive science; Cognitive psychology; Computer science; Artificial intelligence; Biology","score_opus":0.09346482997907715,"score_gpt":0.4917905283320368,"score_spread":0.3983256983529596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410049261","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[9.252727e-7,0.51462066,0.48426145,0.000052719068,0.000040686173,0.00044537205,0.0000079081965,0.000026503501,0.0005437518],"genre_scores_gemma":[8.969512e-7,0.48761904,0.5117234,0.00007155915,0.000041314335,0.0004051035,0.000055543056,0.000029601548,0.00005356065],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978592,0.00040716756,0.00061186415,0.0006869154,0.00007373016,0.00036112338],"domain_scores_gemma":[0.9990219,0.0001902298,0.00014385318,0.0005318687,0.00004714215,0.00006503823],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007561296,0.00032263203,0.0011880622,0.00039812134,0.000025292498,0.0000056102554,0.0001882513,0.00048082115,0.00005633726],"category_scores_gemma":[0.000161461,0.00028153046,0.00023994548,0.00049247366,0.0001803741,0.000022507755,0.00013830175,0.0011783666,0.0000057743478],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012606576,0.000056583962,0.00007590075,0.000266335,0.0000017086656,0.00007628837,0.0000026302382,0.0000038596263,0.0016381833,0.013606136,0.000011640511,0.9842481],"study_design_scores_gemma":[0.00027651616,0.00009482998,0.00009180999,0.001448887,0.000106155574,0.0003754896,0.0000019611568,0.0005682168,0.000101852245,0.022283547,0.974371,0.00027973173],"about_ca_topic_score_codex":0.000018969358,"about_ca_topic_score_gemma":0.000006631524,"teacher_disagreement_score":0.9839684,"about_ca_system_score_codex":0.00011783092,"about_ca_system_score_gemma":0.00017241677,"threshold_uncertainty_score":0.9999637},"labels":[],"label_agreement":null},{"id":"W2410086371","doi":"10.1007/978-1-62703-628-3_6","title":"Derivation and Culture of Canine Embryonic Stem Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"","keywords":"Embryonic stem cell; Blastocyst; Biology; Stem cell; Subculture (biology); Explant culture; Induced pluripotent stem cell; Embryo; Computational biology; Biotechnology; Cell biology; Genetics; Embryogenesis; Botany; Gene; In vitro","score_opus":0.016600875533518366,"score_gpt":0.3510940627715005,"score_spread":0.33449318723798216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410086371","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62188625,0.0024783409,0.37447992,0.00016731207,0.00007522805,0.0003852683,0.000007047496,0.000006298091,0.00051432324],"genre_scores_gemma":[0.38321787,0.0007467626,0.61402524,0.00029209364,0.000048238824,0.00010387035,0.00006227815,0.000036668556,0.0014669939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832517,0.0007106076,0.00024358058,0.000375516,0.0000667978,0.0002783103],"domain_scores_gemma":[0.99939615,0.00003167011,0.000087755056,0.00031499204,0.00010531268,0.00006413723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005359082,0.00014400313,0.00022554328,0.000095747186,0.000021971666,0.000008983917,0.00019906423,0.00027839816,0.000023929882],"category_scores_gemma":[0.00008025347,0.00012683508,0.000051921088,0.00015426122,0.00015482456,0.000002932597,0.0002169496,0.00013359428,0.000004636765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013740308,0.00002417266,0.0013841524,0.000033056596,0.000026813499,0.000002101772,0.000041382515,0.000040983163,0.98635745,0.00014414974,0.00016113647,0.011770849],"study_design_scores_gemma":[0.00039811627,0.00025419655,0.0007388047,0.000009066097,0.0000058918667,0.00000984918,0.00005470572,0.000260699,0.99468505,0.00072808954,0.0027241362,0.0001314198],"about_ca_topic_score_codex":0.0000973967,"about_ca_topic_score_gemma":0.000012433244,"teacher_disagreement_score":0.2395453,"about_ca_system_score_codex":0.000013684092,"about_ca_system_score_gemma":0.00004064199,"threshold_uncertainty_score":0.5172184},"labels":[],"label_agreement":null},{"id":"W2410156565","doi":"10.1007/978-1-61779-046-1_10","title":"Imaging the Cellular Dynamics of Drosophila Argonaute Proteins","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Argonaute; Drosophila melanogaster; Biology; Cell biology; Schneider 2 cells; Piwi-interacting RNA; Drosophila (subgenus); Cytoplasm; Genetics; RNA; RNA interference; Gene","score_opus":0.022667467504909333,"score_gpt":0.35131075560353237,"score_spread":0.32864328809862303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410156565","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32044223,0.000922657,0.67623717,0.00013794142,0.000076833436,0.00027539296,0.0000071142754,0.000006062852,0.001894581],"genre_scores_gemma":[0.49858156,0.00008111595,0.50063616,0.00025920058,0.000046380836,0.00007338487,0.000048680122,0.000032992906,0.00024054751],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979153,0.000941506,0.0003098669,0.0003641224,0.00007928247,0.0003898979],"domain_scores_gemma":[0.99913186,0.00003482559,0.00010766656,0.0005950678,0.000072857954,0.00005771639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014487229,0.00016017826,0.00021531412,0.00009708293,0.00004928154,0.0000062541035,0.00051050034,0.00015135773,0.000018796836],"category_scores_gemma":[0.00036824396,0.00012000423,0.00012715218,0.00018607356,0.00034403725,0.0000021616743,0.00028614458,0.00021288697,0.0000020592188],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005405083,0.000044566244,0.006157745,0.000012362556,0.000031338564,0.000016545433,0.00004265642,0.000008376239,0.97611564,0.00820108,0.000006032112,0.009309589],"study_design_scores_gemma":[0.00029332147,0.00018036227,0.0010912219,0.0000100291,0.000008780666,0.000011874429,0.00006613743,0.0014003301,0.9857341,0.010386103,0.0006717392,0.00014599263],"about_ca_topic_score_codex":0.00012613006,"about_ca_topic_score_gemma":0.000029288321,"teacher_disagreement_score":0.1781393,"about_ca_system_score_codex":0.000017526327,"about_ca_system_score_gemma":0.00006383283,"threshold_uncertainty_score":0.48936304},"labels":[],"label_agreement":null},{"id":"W2410193487","doi":"10.1007/978-1-59745-188-8_18","title":"Using 2D-LC-MS/MS to Identify Francisella tularensis Peptides in Extracts from an Infected Mouse Macrophage Cell Line","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Chromatography; Mass spectrometry; Peptide; Chemistry; Electrospray ionization; Francisella tularensis; Tandem mass spectrometry; Protein mass spectrometry; Electrospray; Sample preparation; Bottom-up proteomics; Biochemistry","score_opus":0.05009453203702218,"score_gpt":0.41874080821563103,"score_spread":0.36864627617860884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410193487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69146085,0.0009314607,0.3067682,0.000025856485,0.00021169113,0.00034890076,0.000066169116,0.00001655388,0.00017029875],"genre_scores_gemma":[0.6292451,0.00028332777,0.36946303,0.0003924842,0.00017771052,0.00003553861,0.00026217656,0.000068552225,0.00007208961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99519473,0.0019605171,0.00068658317,0.0011200032,0.00017962794,0.0008585172],"domain_scores_gemma":[0.99836046,0.00010774767,0.00013296936,0.0009031964,0.00018542545,0.00031023542],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012616604,0.00042326332,0.00062646606,0.00037984856,0.00010462715,0.000038281352,0.0005460031,0.0007637209,0.00012132867],"category_scores_gemma":[0.00084724475,0.0004348455,0.00017040926,0.00059746456,0.00022900224,0.000011570655,0.00039573142,0.00046171382,0.000022085977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027032607,0.00023739076,0.008178957,0.000016616368,0.000029550287,0.00021271608,0.00017701481,0.0007562024,0.98541695,0.000009179247,0.000018249932,0.004676835],"study_design_scores_gemma":[0.0012250252,0.00044058796,0.0103270775,0.000017421899,0.00001356087,0.00002465917,0.000022608037,0.000651385,0.98423463,0.00027367784,0.002279667,0.0004897196],"about_ca_topic_score_codex":0.0021369462,"about_ca_topic_score_gemma":0.000558878,"teacher_disagreement_score":0.0626948,"about_ca_system_score_codex":0.000069397196,"about_ca_system_score_gemma":0.00015138822,"threshold_uncertainty_score":0.99981034},"labels":[],"label_agreement":null},{"id":"W2410197854","doi":"10.1007/978-1-4939-1053-3_6","title":"Site-Saturation Mutagenesis by Overlap Extension PCR","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Saturated mutagenesis; Mutagenesis; Genetics; Computational biology; Biology; Overlap extension polymerase chain reaction; Gene; Stop codon; Directed evolution; Amino acid; Mutation; Mutant; Polymerase chain reaction","score_opus":0.01314801671374131,"score_gpt":0.3316852110568839,"score_spread":0.3185371943431426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410197854","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48843154,0.0023525036,0.50815237,0.00013496375,0.0002364193,0.00013225822,0.000011446129,0.0000050301023,0.000543489],"genre_scores_gemma":[0.5960717,0.00035494938,0.40185323,0.0011689984,0.00012354077,0.000042986725,0.00015297666,0.00003563186,0.00019596923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979281,0.0008304923,0.00028370603,0.00058077875,0.000057222394,0.00031969807],"domain_scores_gemma":[0.999258,0.0000651984,0.00009390348,0.0004613315,0.00006342494,0.000058144095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084225,0.00021522086,0.0002649908,0.00006977216,0.00006390574,0.000012506436,0.0001824604,0.00029059013,0.000008609436],"category_scores_gemma":[0.00044478686,0.00020363311,0.00010438353,0.00011749806,0.0001047609,6.1705737e-7,0.00018394494,0.000098575016,0.000006912388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031328633,0.000030087695,0.003645571,0.0000057902635,0.000026877322,0.0000012458045,0.000022122009,0.00009074381,0.9747934,0.00042830373,0.00024218955,0.020682354],"study_design_scores_gemma":[0.00047386842,0.0003240647,0.0029307662,0.0000043806504,0.000017905702,0.000008061269,0.000018706802,0.0003893344,0.91767955,0.002045503,0.075817056,0.00029081185],"about_ca_topic_score_codex":0.00004427593,"about_ca_topic_score_gemma":0.000018077428,"teacher_disagreement_score":0.10764017,"about_ca_system_score_codex":0.000014043233,"about_ca_system_score_gemma":0.000019189281,"threshold_uncertainty_score":0.83039176},"labels":[],"label_agreement":null},{"id":"W2410198970","doi":"10.1007/978-1-4939-2690-9_15","title":"Miniaturized Technology for DNA Typing: Cassette PCR","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Innovative Microfluidic and Catalytic Techniques Innovation","field":"Engineering","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Typing; Computational biology; Computer science; Biology; Genetics","score_opus":0.03712246343918571,"score_gpt":0.3769550909359845,"score_spread":0.33983262749679877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410198970","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010938091,0.0007534534,0.98526686,0.00032410887,0.00043858643,0.00033243105,0.000009638548,0.0003264375,0.0016104109],"genre_scores_gemma":[0.025606506,0.0000062369522,0.9737331,0.00027831746,0.000036623354,0.0001926526,0.00005904023,0.00003686922,0.00005064513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901193,0.00010220633,0.0003271063,0.00022688287,0.000029709925,0.00030217099],"domain_scores_gemma":[0.9994601,0.00005940137,0.00004495032,0.00027277865,0.00013813625,0.000024648418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012089855,0.00015924548,0.00027172116,0.00045423614,0.000016185644,0.000005793654,0.00021498423,0.00037157684,0.000004871309],"category_scores_gemma":[0.00046298213,0.00016052063,0.00003869567,0.00080562365,0.000109798886,0.000022517435,0.00005811059,0.00021959684,0.00000414298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001222011,0.000008678404,0.00007526184,0.000014286847,0.000021132772,0.0000040629907,0.000041202406,0.0000055043733,0.9213533,0.053043757,0.001101488,0.024319148],"study_design_scores_gemma":[0.0004929189,0.00007829573,0.000008278794,0.000008210613,0.0000062664853,0.000015722893,0.000043906937,0.000594863,0.83837163,0.06374127,0.09647186,0.00016677374],"about_ca_topic_score_codex":0.0000019077386,"about_ca_topic_score_gemma":2.6704598e-7,"teacher_disagreement_score":0.095370375,"about_ca_system_score_codex":0.000115085866,"about_ca_system_score_gemma":0.000035964382,"threshold_uncertainty_score":0.65458417},"labels":[],"label_agreement":null},{"id":"W2410232665","doi":"10.1007/978-1-60327-015-1_30","title":"Analysis of DNA Supercoiling Induced by DNA-Protein Interactions","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"DNA supercoil; DNA; Biophysics; Chemistry; Computational biology; Biology; Genetics; DNA replication","score_opus":0.014503538114271188,"score_gpt":0.35870144038951957,"score_spread":0.3441979022752484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410232665","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6922703,0.00022199085,0.30689892,0.000093423965,0.000052624746,0.000098708915,0.000021549064,0.000005278663,0.0003372489],"genre_scores_gemma":[0.8224301,0.00002899458,0.17699781,0.00023157065,0.00001674746,0.000012953242,0.00021930985,0.000012650185,0.00004986731],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983417,0.0004965321,0.00042971794,0.0004188946,0.000050895876,0.00026227138],"domain_scores_gemma":[0.99924886,0.000028588838,0.00013062202,0.0004747973,0.000063689855,0.000053430576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057849253,0.00017765845,0.00038368892,0.00026714514,0.00003101146,0.000008866185,0.0002775093,0.00025218,0.00002325899],"category_scores_gemma":[0.00022429314,0.0001833023,0.00022330687,0.000494981,0.00005972026,0.0000022172947,0.00008757117,0.00014974258,8.4661474e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020124862,0.000084089326,0.00066084776,0.0000036268925,0.00023918237,0.0000014063671,0.000032701588,0.00022722199,0.9889643,0.0005045235,0.000006523356,0.009255437],"study_design_scores_gemma":[0.0002668626,0.00027195664,0.001254705,0.0000063081275,0.00012290415,0.000002596803,0.000047406884,0.0019410917,0.99358916,0.0013785351,0.00091118406,0.000207285],"about_ca_topic_score_codex":0.000046146335,"about_ca_topic_score_gemma":0.000045547324,"teacher_disagreement_score":0.13015984,"about_ca_system_score_codex":0.000024826259,"about_ca_system_score_gemma":0.000037603702,"threshold_uncertainty_score":0.7474851},"labels":[],"label_agreement":null},{"id":"W2410249890","doi":"10.1007/978-1-62703-194-3_22","title":"Molecular Strategies to Engineer Transgenic Rice Seed Compartments for Large-Scale Production of Plant-Made Pharmaceuticals","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Economic shortage; Biotechnology; Bioreactor; Production (economics); Biochemical engineering; Yeast; Recombinant DNA; Biomass (ecology); Genetically modified crops; Transgene; Scale (ratio); Genetically modified rice; Biology; Engineering; Botany; Biochemistry; Agronomy; Gene; Geography","score_opus":0.07402877469389885,"score_gpt":0.4553330703160366,"score_spread":0.38130429562213775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410249890","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003085697,0.46739906,0.5296893,0.000026450618,0.0002376324,0.0015079922,0.00078037527,0.000012421868,0.00003817167],"genre_scores_gemma":[0.00070224225,0.56498736,0.42882633,0.00013488765,0.00018337923,0.0016953861,0.003279766,0.00011533885,0.00007530573],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967659,0.0007825934,0.00084254326,0.00083173445,0.000100497964,0.0006767088],"domain_scores_gemma":[0.99881196,0.00009162077,0.00022819736,0.0006332118,0.000073707044,0.00016129165],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011142994,0.0005203747,0.0012992708,0.00022726905,0.0000446315,0.000012291668,0.0005039373,0.00066527707,0.00000843261],"category_scores_gemma":[0.00006795382,0.00047056904,0.00051170535,0.00033897403,0.00007803107,0.0000047195435,0.00008735509,0.00027741297,0.0000048955058],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058788544,0.00029034252,0.000006643499,0.0026205496,0.00047165115,0.0000014608997,0.000058619415,0.00010242088,0.94062924,0.0011229132,0.0000339576,0.054603435],"study_design_scores_gemma":[0.0004400531,0.00014681467,0.000007040495,0.00023260065,0.0007238426,0.000025464276,0.000024718558,0.000015304628,0.17297417,0.00014519613,0.8247928,0.00047198532],"about_ca_topic_score_codex":0.0000040538303,"about_ca_topic_score_gemma":0.00000746622,"teacher_disagreement_score":0.8247588,"about_ca_system_score_codex":0.00003044387,"about_ca_system_score_gemma":0.0001656074,"threshold_uncertainty_score":0.9997746},"labels":[],"label_agreement":null},{"id":"W2410250211","doi":"10.1007/978-1-4939-2851-4_11","title":"Ultrastructural Analysis of Drosophila Ovaries by Electron Microscopy","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Canadian Institutes of Health Research; Howard Hughes Medical Institute","keywords":"Ultrastructure; Drosophila melanogaster; Cell biology; Biology; Electron microscope; Microscopy; Oogenesis; Resolution (logic); Organogenesis; Drosophila (subgenus); Anatomy; Oocyte; Biochemistry; Computer science; Physics; Optics; Artificial intelligence; Embryo; Gene","score_opus":0.011260988668610998,"score_gpt":0.4343692819779104,"score_spread":0.42310829330929944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410250211","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2704505,0.0013241877,0.72779447,0.00006831547,0.000025870533,0.00013283489,0.00004125962,0.00001254847,0.00015003426],"genre_scores_gemma":[0.23494059,0.00012925509,0.76396495,0.00024285592,0.000017860073,0.00005421668,0.00055211433,0.000021340216,0.00007680907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985253,0.0003147211,0.00033675498,0.0004360684,0.000052367905,0.00033475005],"domain_scores_gemma":[0.999249,0.000023097551,0.00014453281,0.0004261293,0.00008888351,0.00006839616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004414843,0.00018214558,0.00036454655,0.00016954649,0.000025847552,0.0000069001044,0.00028046794,0.00023612872,0.0000064939222],"category_scores_gemma":[0.00013611643,0.00017864369,0.00013611841,0.0006535954,0.00022583992,0.0000025120983,0.00008437663,0.0001404799,4.4936903e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063751824,0.00003464356,0.0023699887,0.0000026644461,0.00015347824,3.1675964e-7,0.000017314947,0.00013590872,0.99443,0.0016381775,0.00020445278,0.0009493088],"study_design_scores_gemma":[0.00023464226,0.00030128006,0.00023148568,0.0000015918179,0.00009183105,0.000004160226,0.000014019535,0.00006454645,0.98256266,0.0055642333,0.010757238,0.00017231792],"about_ca_topic_score_codex":0.000047507707,"about_ca_topic_score_gemma":0.000013770748,"teacher_disagreement_score":0.036170505,"about_ca_system_score_codex":0.00003232096,"about_ca_system_score_gemma":0.00006472472,"threshold_uncertainty_score":0.72848785},"labels":[],"label_agreement":null},{"id":"W2410259403","doi":"10.1007/978-1-61779-977-8_15","title":"Identification of Cooked Bone Using TEM Imaging of Bone Collagen","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic Anthropology and Bioarchaeology Studies","field":"Arts and Humanities","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"York University","keywords":"Charring; Bone matrix; Transmission electron microscopy; Matrix (chemical analysis); Collagen fibril; Biophysics; Bone structure; Chemistry; Ultrastructure; Electron microscope; Materials science; Crystallography; Biomedical engineering; Composite material; Nanotechnology; Anatomy; Biology; Optics; Medicine","score_opus":0.05097042307270182,"score_gpt":0.39481280993566725,"score_spread":0.3438423868629654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410259403","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6741688,0.012629148,0.30867627,0.00083628815,0.0014104181,0.0002703242,0.000029836347,0.000023792032,0.0019551131],"genre_scores_gemma":[0.9050036,0.000040871455,0.09468354,0.00008479067,0.00005660068,0.0000060883312,0.000006646588,0.000008040999,0.0001098089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984741,0.00064120477,0.00047064002,0.00014005402,0.000038075137,0.00023591262],"domain_scores_gemma":[0.999316,0.0001462839,0.00026060353,0.00016189087,0.000097589094,0.000017635257],"candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0013801,0.000100690864,0.00037185245,0.00018005236,0.00007858359,0.000001684751,0.000075343254,0.00008046507,0.00010987519],"category_scores_gemma":[0.00020546762,0.000086455286,0.0000694365,0.00006431963,0.008143417,0.000035365476,0.00010631475,0.000065657616,0.0000017404137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034535777,0.000077632045,0.028895034,0.00003696277,0.000068166264,0.000004062841,0.0061751693,0.00000276909,0.51070863,0.45182636,0.000026665917,0.0021439954],"study_design_scores_gemma":[0.0009114918,0.0001791953,0.0030615889,0.000051859955,0.00019824048,0.000047287467,0.029591803,0.00054992776,0.9293235,0.03159149,0.004089706,0.0004039049],"about_ca_topic_score_codex":0.0007078733,"about_ca_topic_score_gemma":0.00019651253,"teacher_disagreement_score":0.4202349,"about_ca_system_score_codex":0.000015689044,"about_ca_system_score_gemma":0.00001552916,"threshold_uncertainty_score":0.99455583},"labels":[],"label_agreement":null},{"id":"W2410277158","doi":"10.1007/978-1-61779-231-1_16","title":"Emerging Mass Spectrometry-Based Technologies for Analyses of Chromatin Changes: Analysis of Histones and Histone Modifications","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia; University of Victoria","funders":"","keywords":"Fourier transform ion cyclotron resonance; Mass spectrometry; Proteomics; Chemistry; Histone; Top-down proteomics; Computational biology; Posttranslational modification; Acetylation; Tandem mass spectrometry; Chromatin; Electron-capture dissociation; Fragmentation (computing); Biochemistry; Chromatography; Protein mass spectrometry; Biology; DNA","score_opus":0.07467374269624248,"score_gpt":0.45027663230734954,"score_spread":0.37560288961110705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410277158","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038602155,0.0010190727,0.9597009,0.00009282295,0.0000047151852,0.00014388881,0.00006282424,0.00006039258,0.0003132337],"genre_scores_gemma":[0.1898417,0.000076834935,0.809745,0.0000068507907,0.0000015227716,0.00027850174,0.000031750733,0.000009330245,0.000008511756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991696,0.00005299858,0.00033635309,0.00027141214,0.000032102733,0.00013752222],"domain_scores_gemma":[0.9989987,0.00015921211,0.00031904134,0.00044132813,0.000067713736,0.000013995739],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029504247,0.00011195847,0.0004312228,0.0006554368,0.000027395015,0.0000011658775,0.00021296341,0.00015729581,0.000030804717],"category_scores_gemma":[0.00024946948,0.00010987268,0.00010861143,0.0008256471,0.00027308238,0.00000902912,0.000042128944,0.00007964945,3.3301138e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014482072,0.00004781185,0.000595988,0.00006162512,0.00015071979,2.3816601e-7,0.000051384075,0.00006076213,0.98320574,0.010785123,4.7091328e-7,0.0050256713],"study_design_scores_gemma":[0.00011674696,0.000048414175,0.00006677332,0.000009871564,0.0002878488,2.84462e-7,0.00013003561,0.0043312316,0.96285564,0.03198657,0.00006946751,0.00009711013],"about_ca_topic_score_codex":0.000092397415,"about_ca_topic_score_gemma":0.000011010594,"teacher_disagreement_score":0.15123954,"about_ca_system_score_codex":0.000039091516,"about_ca_system_score_gemma":0.00001404204,"threshold_uncertainty_score":0.44804776},"labels":[],"label_agreement":null},{"id":"W2410278926","doi":"10.1007/978-1-4939-2257-4_34","title":"The Use of FLIM-FRET for the Detection of Mitochondria-Associated Protein Interactions","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Sunnybrook Hospital; University of Toronto","funders":"","keywords":"Förster resonance energy transfer; Fluorescence-lifetime imaging microscopy; Confocal; Confocal microscopy; Microscopy; Microscope; Fluorescence; Biophysics; Nanotechnology; Chemistry; Cell biology; Materials science; Biology; Physics; Optics","score_opus":0.0558771314282603,"score_gpt":0.4232981711020906,"score_spread":0.36742103967383033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410278926","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023131825,0.0008039059,0.9749272,0.00012669811,0.00020640962,0.0007626032,0.00002169294,0.000009473136,0.000010215542],"genre_scores_gemma":[0.07717936,0.00007188879,0.9220641,0.000067386245,0.000030770316,0.0004053302,0.000028155324,0.000024433719,0.00012856352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998469,0.00072115485,0.00034132763,0.00022248147,0.000049618688,0.00019645103],"domain_scores_gemma":[0.99875206,0.00027645487,0.00024684885,0.00044921532,0.00025062275,0.00002482185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092416006,0.00011826422,0.00017925452,0.00004996299,0.000059475777,0.000007741532,0.00028283056,0.00017819679,5.9476224e-7],"category_scores_gemma":[0.00359083,0.00007809347,0.00011126943,0.00016364439,0.00033167275,0.000004070928,0.00012395308,0.0001355638,1.3463611e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017120814,0.000033295953,0.00016180861,0.0000044237445,0.00004683581,1.666665e-7,0.0000274288,0.00007280904,0.983881,0.00029184352,0.000052055533,0.015257128],"study_design_scores_gemma":[0.00027792717,0.00039457355,0.0000472733,0.000013091363,0.000016513713,0.0000022963839,0.000042545216,0.0004018709,0.9685413,0.0041532414,0.026030831,0.00007848537],"about_ca_topic_score_codex":0.00005911653,"about_ca_topic_score_gemma":0.00011364332,"teacher_disagreement_score":0.05404753,"about_ca_system_score_codex":0.000029956811,"about_ca_system_score_gemma":0.000056096666,"threshold_uncertainty_score":0.4298818},"labels":[],"label_agreement":null},{"id":"W2410298522","doi":"10.1007/978-1-59745-480-3","title":"Nanostructure Design","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Nanotechnology research and applications","field":"Engineering","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Air Force Research Laboratory; National Cancer Institute; Materials and Manufacturing Directorate; University of California, Santa Barbara; Technische Universiteit Delft; University of Crete; University of Bristol; University of Illinois at Urbana-Champaign; Tel Aviv University; McMaster University","keywords":"Materials science","score_opus":0.02525903177928419,"score_gpt":0.3651394256719885,"score_spread":0.3398803938927043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410298522","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000072196144,0.005873212,0.9490592,0.000052693234,0.0001561945,0.0003848239,0.000020173482,0.00023897328,0.044207547],"genre_scores_gemma":[0.000009588973,0.0013681384,0.9657381,0.00006935462,0.000049776925,0.00017091939,0.00007875097,0.000080146965,0.03243522],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99864787,0.00030132066,0.0002554759,0.00033573294,0.000056412664,0.00040317245],"domain_scores_gemma":[0.9991503,0.00020608715,0.00003333295,0.0005277086,0.000026309312,0.00005626057],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00031754354,0.00027104252,0.00042059482,0.00039105158,0.000031383057,0.0000049221503,0.0004732477,0.0013702479,0.000042511678],"category_scores_gemma":[0.00013312181,0.000269778,0.000091182774,0.00019742559,0.0002480837,0.000008280416,0.000085942236,0.0010702754,0.000045172168],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000072077482,0.000010668873,0.0000061117385,0.000060164788,0.00013744363,0.00018779011,0.000025158583,0.0013962457,0.85427976,0.03438916,0.017797772,0.091702506],"study_design_scores_gemma":[0.00022000218,0.000060544913,0.0000023124903,0.00002639665,0.000013563947,0.0000895951,0.0000012571575,0.00080999994,0.2252849,0.22453468,0.54854524,0.0004114931],"about_ca_topic_score_codex":0.0000013488814,"about_ca_topic_score_gemma":0.0000011760543,"teacher_disagreement_score":0.6289949,"about_ca_system_score_codex":0.00013270954,"about_ca_system_score_gemma":0.00012973552,"threshold_uncertainty_score":0.99997544},"labels":[],"label_agreement":null},{"id":"W2410422668","doi":"10.1007/978-1-60327-394-7_7","title":"Characterization of Kinase Target Phosphorylation Consensus Motifs Using Peptide SPOT Arrays","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Phosphorylation; Kinase; Protein phosphorylation; Biochemistry; Threonine; Serine; Cell biology; Proteome; Biology; Protein kinase A; Chemistry","score_opus":0.0910636752536565,"score_gpt":0.4677162151350612,"score_spread":0.3766525398814047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410422668","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001951584,0.7833702,0.2130889,0.000060105092,0.00017202388,0.0009006976,0.00007920966,0.000015993326,0.0003612627],"genre_scores_gemma":[0.000005716774,0.5595243,0.43944812,0.00006839001,0.000077998346,0.000015207127,0.0006639041,0.000031674743,0.00016470627],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.995971,0.0019777662,0.0009661731,0.0005134023,0.00017251573,0.0003991477],"domain_scores_gemma":[0.99858946,0.0003043071,0.00046338027,0.00038948143,0.00014254898,0.00011083631],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013351651,0.00038444053,0.0020849758,0.00054506346,0.000035748653,0.0000065033005,0.00017139265,0.00058828585,0.00009878959],"category_scores_gemma":[0.00056117773,0.00031082335,0.0004532117,0.0005564574,0.00021746893,0.0000114419245,0.00008681565,0.00058952585,0.000007175853],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008418692,0.000102609425,0.00008302604,0.0038650353,0.00012542812,0.00017374597,0.000023404356,0.000005504294,0.36140284,0.0005328887,0.0000031718732,0.63359815],"study_design_scores_gemma":[0.00072287564,0.00060740835,0.00016459516,0.007669239,0.00068855006,0.0004427904,0.000008944698,0.0011497855,0.06170683,0.0015597665,0.92462856,0.0006506415],"about_ca_topic_score_codex":0.000074493575,"about_ca_topic_score_gemma":0.0000010777607,"teacher_disagreement_score":0.9246254,"about_ca_system_score_codex":0.0001252104,"about_ca_system_score_gemma":0.00035825087,"threshold_uncertainty_score":0.9999344},"labels":[],"label_agreement":null},{"id":"W2410491910","doi":"10.1007/978-1-60761-404-3_7","title":"The Application of Fluorescent Probes for the Analysis of Lipid Dynamics During Phagocytosis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of Canada; Cystic Fibrosis Foundation","keywords":"Phagocytosis; Cell biology; Fluorescence; Confocal microscopy; Effector; Confocal; Biology; Dynamics (music); Fluorescence microscope; Confocal laser scanning microscopy; Biophysics; Chemistry; Optics","score_opus":0.009740847305504322,"score_gpt":0.3621111307095459,"score_spread":0.3523702834040416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410491910","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38123822,0.0004887442,0.61754113,0.00020267787,0.00007231448,0.0004081013,0.00002304873,0.000003018263,0.000022720387],"genre_scores_gemma":[0.90352863,0.00018974795,0.09595322,0.00006813556,0.00005455489,0.00008985549,0.00008755666,0.000009081066,0.000019211426],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989118,0.0002520098,0.00034400675,0.00025214843,0.000053896983,0.00018613205],"domain_scores_gemma":[0.99910367,0.00010226663,0.00018446975,0.00049691467,0.000093928364,0.000018732344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065949524,0.00011700868,0.00025649683,0.00008719816,0.0000625972,0.0000046065284,0.00034309298,0.00014810747,0.0000012207287],"category_scores_gemma":[0.00018101468,0.000069958944,0.00024059441,0.0003501462,0.00014763323,0.0000010867828,0.00005667523,0.00006969775,4.4099274e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009733626,0.000034674496,0.0018076351,0.000011075962,0.00020045006,8.605401e-8,0.000019932893,0.00031406406,0.9376744,0.0014588067,0.0000013923834,0.058380168],"study_design_scores_gemma":[0.0002645256,0.00013864838,0.008902367,0.0000023956402,0.00032554468,0.0000012133032,0.00003628962,0.0017055859,0.9875537,0.00028338798,0.00070810295,0.00007821379],"about_ca_topic_score_codex":0.000017478911,"about_ca_topic_score_gemma":0.00005759364,"teacher_disagreement_score":0.5222904,"about_ca_system_score_codex":0.000013616276,"about_ca_system_score_gemma":0.000025128566,"threshold_uncertainty_score":0.28528428},"labels":[],"label_agreement":null},{"id":"W2410608061","doi":"10.1007/978-1-60327-136-3_11","title":"EST Databases and Web Tools for EST Projects","year":2009,"lang":"fr","type":"article","venue":"Methods in molecular biology","topic":"Machine Learning in Bioinformatics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Perl; Computer science; Database; Annotation; Key (lock); Process (computing); Interface (matter); Population; World Wide Web; Programming language","score_opus":0.03982723840015152,"score_gpt":0.4190411387041132,"score_spread":0.3792139003039617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410608061","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022067044,0.02071873,0.947914,0.0024191977,0.0007392165,0.0011101529,0.00028614054,0.0000280003,0.0047175353],"genre_scores_gemma":[0.009234749,0.0017285665,0.98460865,0.0023751364,0.00029817928,0.00007768405,0.0008630311,0.000043273172,0.0007707095],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99663574,0.0011540941,0.0006410474,0.0007277724,0.000078393525,0.00076298154],"domain_scores_gemma":[0.9984161,0.00039334266,0.00024534608,0.0006978338,0.00010341044,0.0001439369],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019418185,0.00044512737,0.0005409505,0.00017145395,0.000097821634,0.00007417337,0.0003617285,0.00062028016,0.000022996472],"category_scores_gemma":[0.0045309723,0.00045796268,0.00015272074,0.00022773659,0.00038512298,0.000018638435,0.0002690236,0.0004072861,0.0000057526236],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011993784,0.00014234547,0.0009951596,0.00020456605,0.0000683339,0.000015465323,0.000120130644,0.000108937995,0.6757599,0.031370625,0.00039556887,0.29069903],"study_design_scores_gemma":[0.00222724,0.0026605797,0.00046306208,0.00014885899,0.00011233184,0.00020208946,0.00018311528,0.012013114,0.20288756,0.0037195683,0.77443165,0.0009508217],"about_ca_topic_score_codex":0.00004256642,"about_ca_topic_score_gemma":0.000051428935,"teacher_disagreement_score":0.7740361,"about_ca_system_score_codex":0.000036262307,"about_ca_system_score_gemma":0.00024081397,"threshold_uncertainty_score":0.9997872},"labels":[],"label_agreement":null},{"id":"W2410632576","doi":"10.1007/978-1-4939-1280-3_18","title":"Solid-Phase Supports for the in situ Assembly of Quantum Dot-FRET Hybridization Assays in Channel Microfluidics","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Förster resonance energy transfer; Microfluidics; Quantum dot; Nanotechnology; Biosensor; Transduction (biophysics); Materials science; Biophysics; Fluorescence; Physics; Biology","score_opus":0.01472075250522155,"score_gpt":0.3601559691130355,"score_spread":0.34543521660781396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410632576","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12273039,0.0103958165,0.8661063,0.000117739255,0.000107378764,0.0004249768,0.000011371923,0.000020502046,0.000085545886],"genre_scores_gemma":[0.93472785,0.013191845,0.051283013,0.00019658818,0.000041550014,0.00037050268,0.00012587875,0.00005638024,0.0000063737916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984045,0.0004622502,0.0004958896,0.00025137374,0.000048284455,0.00033767425],"domain_scores_gemma":[0.9991096,0.00039138502,0.00006769049,0.00036448133,0.000038071157,0.00002873029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001982058,0.00015911124,0.00033747728,0.00023503826,0.00002301932,0.0000064226683,0.00025506486,0.00018680295,0.000005380748],"category_scores_gemma":[0.00025077764,0.00014189408,0.00006775883,0.00040883772,0.00006353666,0.000019028392,0.000040000894,0.00017924809,0.0000010382463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001624291,0.00005262786,0.00009229456,0.000033362492,0.000014750327,0.0000020791097,0.00013459205,0.0004258081,0.98528826,0.009925768,0.0005869822,0.003427201],"study_design_scores_gemma":[0.00072859076,0.000098480596,0.00012599953,0.000013718073,0.000013136602,0.000005557852,0.00004579712,0.026323155,0.95572215,0.009868083,0.0069073127,0.00014804373],"about_ca_topic_score_codex":0.00003262949,"about_ca_topic_score_gemma":0.000017005324,"teacher_disagreement_score":0.81482327,"about_ca_system_score_codex":0.0000550041,"about_ca_system_score_gemma":0.000030060955,"threshold_uncertainty_score":0.5786273},"labels":[],"label_agreement":null},{"id":"W2410657201","doi":"10.1007/978-1-59745-548-0_1","title":"High Throughput Whole Mount In Situ Hybridization of Zebrafish Embryos for Analysis of Tissue-Specific Gene Expression Changes After Environmental Perturbation","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; University of Ottawa","funders":"","keywords":"Biology; In situ hybridization; Gene expression; Gene; DNA microarray; Organism; Gene expression profiling; Zebrafish; Computational biology; In situ; Model organism; Genetics; Cell biology; Chemistry","score_opus":0.019622050565609398,"score_gpt":0.31630628390107923,"score_spread":0.29668423333546984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410657201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5930378,0.001509187,0.4051172,0.00002923711,0.00006265297,0.00020258174,0.000032445078,0.0000016603017,0.000007198033],"genre_scores_gemma":[0.76965815,0.00065773143,0.22896907,0.00003518311,0.00005033067,0.00006570324,0.0004937436,0.000014599616,0.00005546454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998604,0.000313056,0.0003578781,0.00048569654,0.00007184612,0.00016755305],"domain_scores_gemma":[0.9994057,0.000020634867,0.0001834656,0.00032553912,0.000042090047,0.000022606544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038612337,0.00014151122,0.00033374326,0.00024267788,0.000022979104,0.0000020717844,0.0001079212,0.0002203182,0.0000113636],"category_scores_gemma":[0.00006298504,0.00013469868,0.000101334575,0.00024999358,0.00013493742,0.0000030667952,0.00008247618,0.000054116157,2.636856e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017783343,0.00011760885,0.0030127957,0.000013077692,0.000069948735,0.00000200994,0.00013675686,0.001502898,0.9934394,0.000051404306,0.000007180472,0.0014691133],"study_design_scores_gemma":[0.0003992983,0.00039526506,0.022389816,0.000006217696,0.000050748375,0.0000032716466,0.00003776036,0.00016543767,0.9744843,0.00017574603,0.0017596959,0.00013243625],"about_ca_topic_score_codex":0.000018029586,"about_ca_topic_score_gemma":0.000019546567,"teacher_disagreement_score":0.17662036,"about_ca_system_score_codex":0.00003400137,"about_ca_system_score_gemma":0.00001514202,"threshold_uncertainty_score":0.5492853},"labels":[],"label_agreement":null},{"id":"W2410697751","doi":"10.1007/978-1-61779-821-4_54","title":"Zymographic Assay of Oxidases Using Peroxidase or Hemin Entrapped in Polyacrylamide Gel","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrospun Nanofibers in Biomedical Applications","field":"Materials Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Hemin; Peroxidase; Polyacrylamide gel electrophoresis; Polyacrylamide; Chemistry; Biochemistry; Chromatography; Enzyme; Heme; Polymer chemistry","score_opus":0.031651801319255074,"score_gpt":0.4100862979469238,"score_spread":0.3784344966276687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410697751","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.515278,0.00074627553,0.48349416,0.000074618416,0.000112641734,0.00018875781,0.000008705507,0.00001891235,0.00007795963],"genre_scores_gemma":[0.30801705,0.000032314852,0.69167906,0.00015533206,0.000026153539,0.000057237154,0.0000072414377,0.000015494203,0.000010144217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965359,0.0016273719,0.00061152165,0.0003805246,0.0001346612,0.00071001536],"domain_scores_gemma":[0.9984841,0.00073788135,0.00018858841,0.00043527898,0.000036895988,0.00011726449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003666118,0.00019334244,0.00044337293,0.00040695022,0.000036588954,0.000007870029,0.00040625493,0.00028188873,0.00022038392],"category_scores_gemma":[0.0006272251,0.00015931622,0.000083886494,0.0011367055,0.0005370303,0.000057241436,0.0001537976,0.00019344558,0.0000057208067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037206923,0.00022612166,0.011022829,0.000023707727,0.0000069493394,0.000005125084,0.00008890298,0.0000030849367,0.9823497,0.003965939,0.000004101743,0.002266348],"study_design_scores_gemma":[0.00038293863,0.0000661108,0.0017405885,0.000031481555,0.000014612656,0.000021009475,0.00003453191,0.00012367123,0.993119,0.0040711313,0.00021649293,0.0001784269],"about_ca_topic_score_codex":0.000188476,"about_ca_topic_score_gemma":0.000028277065,"teacher_disagreement_score":0.20818487,"about_ca_system_score_codex":0.000084117586,"about_ca_system_score_gemma":0.00008114381,"threshold_uncertainty_score":0.6496727},"labels":[],"label_agreement":null},{"id":"W2410740043","doi":"10.1007/978-1-4939-2155-3_9","title":"Direct Approach to Modeling Epistasis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture Food and Rural Development","funders":"","keywords":"Epistasis; Quantitative trait locus; Biology; Genetics; Genetic architecture; Trait; Genetic association; Genetic model; Genotype; Evolutionary biology; Gene; Computational biology; Single-nucleotide polymorphism; Computer science","score_opus":0.026116050349460313,"score_gpt":0.34889384704380527,"score_spread":0.322777796694345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410740043","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.034276914,0.00042470958,0.9354281,0.00007460459,0.00019372071,0.00022174498,0.0000052557716,0.000017582068,0.029357402],"genre_scores_gemma":[0.19360249,0.0000073512615,0.80509555,0.0009095786,0.00010540424,0.00007016878,0.00003812369,0.000028604964,0.00014276001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752533,0.0010318308,0.00029524285,0.00067304756,0.000063702806,0.00041085418],"domain_scores_gemma":[0.99916774,0.000040961353,0.000043324857,0.0005801927,0.00004522363,0.00012256998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001137717,0.0002200296,0.00029052133,0.00011203536,0.000045013097,0.000011350818,0.0003826514,0.00027707597,0.0000072021617],"category_scores_gemma":[0.00053576735,0.00021233993,0.00010173027,0.00018908214,0.00007408299,0.0000010293883,0.00020187901,0.00013073547,0.00000809532],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005758886,0.00011451856,0.0005783506,0.000017774242,0.000045224682,3.3385285e-7,0.00009133797,0.05640743,0.86898524,0.036133677,0.00009891279,0.037469607],"study_design_scores_gemma":[0.0018591528,0.0018726034,0.002196644,0.000033611585,0.0000751936,0.00004035202,0.00014762908,0.019010007,0.80951136,0.07234535,0.09114636,0.0017617404],"about_ca_topic_score_codex":0.000034047214,"about_ca_topic_score_gemma":0.0000042283373,"teacher_disagreement_score":0.15932557,"about_ca_system_score_codex":0.000012631805,"about_ca_system_score_gemma":0.0000311667,"threshold_uncertainty_score":0.8658971},"labels":[],"label_agreement":null},{"id":"W2410752324","doi":"10.1007/978-1-4939-1016-8_1","title":"Eosinophil Overview: Structure, Biological Properties, and Key Functions","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Eosinophil; Function (biology); Immunology; Effector; Cell function; Key (lock); Biology; Neuroscience; Cell biology; Cell; Ecology; Genetics","score_opus":0.12396836979298068,"score_gpt":0.43993759603888516,"score_spread":0.3159692262459045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410752324","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000076573335,0.9665939,0.032003205,0.000033476434,0.00028746636,0.00075571606,0.000037450925,0.00004224803,0.00016991989],"genre_scores_gemma":[0.000007234102,0.92852944,0.07022618,0.0006335321,0.00017730083,0.00010309654,0.00017252968,0.00004499362,0.00010571616],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952543,0.0029876193,0.0006244408,0.0007087012,0.0000718983,0.0003530855],"domain_scores_gemma":[0.9989617,0.00018128003,0.00019613716,0.00043831242,0.000046425073,0.00017617823],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00055424584,0.00046609645,0.0022344338,0.00030109013,0.000056719287,0.0000115784,0.00012013456,0.0009516843,0.00009084457],"category_scores_gemma":[0.00078377855,0.0002691295,0.00037391981,0.00029791598,0.0004053241,0.000009854161,0.00018994077,0.00060640473,0.000012522497],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019077275,0.00005309792,0.00012362363,0.004243341,0.00010805743,0.00007127834,0.000004336778,1.8237058e-7,0.0014603678,0.00030198522,0.000049834773,0.99356484],"study_design_scores_gemma":[0.00028518937,0.0004237759,0.000055717854,0.0020293258,0.00046320952,0.0002668151,0.0000038725007,0.0000053778067,0.00005351471,0.00038769507,0.9957313,0.0002942259],"about_ca_topic_score_codex":0.000008838115,"about_ca_topic_score_gemma":0.0000015876312,"teacher_disagreement_score":0.99568146,"about_ca_system_score_codex":0.000057045574,"about_ca_system_score_gemma":0.00022277358,"threshold_uncertainty_score":0.9999761},"labels":[],"label_agreement":null},{"id":"W2410783873","doi":"10.1007/978-1-4939-2877-4_2","title":"In Vitro DNase I Footprinting","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Sherbrooke","funders":"","keywords":"Footprinting; DNA footprinting; Deoxyribonuclease I; Nuclease; DNA; Cleavage (geology); Molecular biology; Chemistry; Deoxyribonuclease; Biology; DNA-binding protein; Biochemistry; Gene; Base sequence; Transcription factor","score_opus":0.033555126872602474,"score_gpt":0.3814589442300926,"score_spread":0.3479038173574901,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410783873","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28187492,0.0012150707,0.7140636,0.00024332883,0.0003116759,0.00021914484,0.0000018990435,0.000010302239,0.0020600464],"genre_scores_gemma":[0.18816908,0.000027013582,0.81066984,0.00075112795,0.00009104516,0.00008576316,0.000016704378,0.000029520948,0.00015988693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973384,0.0013958457,0.0003215621,0.0004882987,0.00006373429,0.00039212086],"domain_scores_gemma":[0.9993177,0.000043877757,0.00007698593,0.00042347348,0.00004096186,0.0000970008],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002354014,0.00018183391,0.00026576553,0.00015154683,0.000016703152,0.000010182367,0.00029109902,0.0003263458,0.000009287215],"category_scores_gemma":[0.0011491193,0.0001803157,0.00008143545,0.00019018704,0.00006957814,0.0000024395556,0.00021412468,0.00014923804,0.000007508757],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011209107,0.0000390946,0.0006225815,0.0000048886905,0.000010551615,0.000035270008,0.00003522616,0.000029327211,0.9752966,0.0009854052,0.000018118479,0.022810806],"study_design_scores_gemma":[0.0006049121,0.00013885116,0.000045667606,0.0000062657796,0.0000036753645,0.00001993545,0.000055200326,0.00004363975,0.97051424,0.012471304,0.015890175,0.00020614071],"about_ca_topic_score_codex":0.00006804668,"about_ca_topic_score_gemma":0.000010657985,"teacher_disagreement_score":0.096606255,"about_ca_system_score_codex":0.000027306549,"about_ca_system_score_gemma":0.0000740822,"threshold_uncertainty_score":0.73530614},"labels":[],"label_agreement":null},{"id":"W2410820747","doi":"10.1007/978-1-62703-968-0_15","title":"Bioinformatics Identification of Coevolving Residues","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Coevolution; Identification (biology); Inference; Biology; Computational biology; Evolutionary biology; Multiple sequence alignment; Computer science; Artificial intelligence; Sequence alignment; Genetics; Ecology; Gene; Peptide sequence","score_opus":0.015981086088912858,"score_gpt":0.3510013321350089,"score_spread":0.33502024604609604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410820747","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30551153,0.0008133518,0.6925789,0.000040700892,0.00012549848,0.00009393201,0.000005467564,0.000002164174,0.00082840456],"genre_scores_gemma":[0.47389877,0.0001378183,0.52576077,0.00009913629,0.000030282059,0.000013323338,0.000019117006,0.000010686494,0.000030112462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870884,0.0004112242,0.00044042643,0.00021737894,0.000041349984,0.0001807572],"domain_scores_gemma":[0.9993009,0.000056389294,0.00017339089,0.000370468,0.000072990275,0.000025852645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012495576,0.000114545364,0.00020713932,0.00008906666,0.000028028513,0.000005628137,0.0002056118,0.00014692881,0.0000026637795],"category_scores_gemma":[0.00064687023,0.000110422836,0.00006827783,0.000106456646,0.00010884191,4.8060855e-7,0.00014401137,0.000057485628,0.0000016275567],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011147609,0.000016321881,0.005276985,0.000018634135,0.000025616004,1.501081e-7,0.000057343357,0.00017158374,0.9782951,0.0023160316,0.000015671458,0.013795446],"study_design_scores_gemma":[0.00025691424,0.0001766845,0.005516847,0.0000063400103,0.0000116068495,0.0000029686653,0.00005121104,0.001144774,0.98169494,0.0059819575,0.0050162976,0.00013944454],"about_ca_topic_score_codex":0.000014968026,"about_ca_topic_score_gemma":0.000013590361,"teacher_disagreement_score":0.16838723,"about_ca_system_score_codex":0.0000062550707,"about_ca_system_score_gemma":0.00002018941,"threshold_uncertainty_score":0.45029125},"labels":[],"label_agreement":null},{"id":"W2410856523","doi":"10.1007/978-1-61779-436-0_6","title":"Preparation of Enriched Mouse Syncitia-Free Pachytene Spermatocyte Cell Suspensions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"National Institute of Environmental Health Sciences","keywords":"Spermatocyte; Chemistry; Cell biology; Biology; Meiosis; Biochemistry","score_opus":0.04028733585309475,"score_gpt":0.3811841494987684,"score_spread":0.34089681364567365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410856523","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42219687,0.00038871993,0.5711998,0.00004056647,0.0001476001,0.00033086375,0.0000034001205,0.000036037687,0.0056561907],"genre_scores_gemma":[0.44987798,0.000032108223,0.54975265,0.0001664072,0.000018691062,0.000022112557,0.000029684517,0.000016095788,0.000084254214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984778,0.00056624296,0.0003661762,0.00029124712,0.000080053,0.00021847518],"domain_scores_gemma":[0.9989487,0.000124883,0.0001195699,0.0006223809,0.00011070965,0.00007377482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006265065,0.00014412905,0.00037333503,0.00020343643,0.000019395096,0.0000018592344,0.00011304013,0.00021605211,0.00013337088],"category_scores_gemma":[0.0010537722,0.00012437216,0.000111530535,0.0002507733,0.00011165244,0.000023333527,0.00008167524,0.00016622416,0.000032338605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018394404,0.0002021398,0.011799289,0.000029983812,0.000029572315,0.000061297214,0.00020439096,0.0000042936686,0.98386395,0.002481306,0.000046448913,0.0010934012],"study_design_scores_gemma":[0.0013090111,0.00056651415,0.008325899,0.0000131024335,0.00009785479,0.000085222564,0.00006210903,0.00037841825,0.9828138,0.0060517266,0.00017404396,0.00012229577],"about_ca_topic_score_codex":0.00011370448,"about_ca_topic_score_gemma":0.000013557952,"teacher_disagreement_score":0.027681114,"about_ca_system_score_codex":0.000035837216,"about_ca_system_score_gemma":0.000058357888,"threshold_uncertainty_score":0.50717497},"labels":[],"label_agreement":null},{"id":"W2410931041","doi":"10.1007/978-1-62703-339-8_1","title":"The Coagulation System in Humans","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Thrombosis and Atherosclerosis Research Institute","funders":"","keywords":"Coagulation; Fibrin; Fibrinolysis; Thrombin; Clot formation; Platelet; Coagulation system; Medicine; Chemistry; Immunology; Internal medicine","score_opus":0.03647535922202013,"score_gpt":0.39623665856931284,"score_spread":0.35976129934729273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410931041","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17717232,0.00044703262,0.8159716,0.0010362939,0.00033554647,0.0007432652,3.9838793e-7,0.000050101404,0.004243414],"genre_scores_gemma":[0.7177939,0.00001011203,0.28156933,0.00038075296,0.000022115704,0.00011412164,0.0000070094416,0.000012093902,0.00009055526],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835527,0.00087634264,0.0003031877,0.00019745287,0.000060672057,0.00020706728],"domain_scores_gemma":[0.99941236,0.00016315431,0.000058878446,0.00028364945,0.00004478291,0.000037168335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011310994,0.000091712005,0.00023291774,0.00012571077,0.00004175275,0.000011508022,0.000086752094,0.00015147004,0.00004106017],"category_scores_gemma":[0.00017171714,0.000063490406,0.000048917645,0.0002271145,0.00005731357,0.000016898099,0.000036615053,0.00016169135,0.000030719628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011692874,0.000040102845,0.013657897,0.000020903915,0.000019555906,0.000007757143,0.00009024387,0.000015961938,0.77822554,0.17946102,0.000013390993,0.02843594],"study_design_scores_gemma":[0.0058468897,0.0007710174,0.39773327,0.000300944,0.000104688406,0.000077258446,0.0017835922,0.030049345,0.42187652,0.13248669,0.008337913,0.00063186843],"about_ca_topic_score_codex":0.00013042506,"about_ca_topic_score_gemma":0.000029985365,"teacher_disagreement_score":0.5406216,"about_ca_system_score_codex":0.000060957616,"about_ca_system_score_gemma":0.0000220605,"threshold_uncertainty_score":0.25890636},"labels":[],"label_agreement":null},{"id":"W2410948615","doi":"10.1007/978-1-4939-2684-8_17","title":"Analysis of Betaines from Marine Algae Using LC-MS-MS","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle metabolism and nutrition","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Betaine; Osmolyte; Glycine; Algae; Ammonium; Chemistry; Salinity; Botany; Chromatography; Biochemistry; Biology; Amino acid; Organic chemistry; Ecology","score_opus":0.03804439839713078,"score_gpt":0.3882526285378436,"score_spread":0.3502082301407128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2410948615","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5383012,0.0016541996,0.4594373,0.000027299919,0.00014316512,0.00008304401,0.00003977544,0.0000051847783,0.00030878966],"genre_scores_gemma":[0.19144599,0.00016419076,0.8070435,0.00022598877,0.00014377105,0.000015981464,0.0009117203,0.000023961757,0.000024907971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976132,0.0011267449,0.00043011268,0.00047810448,0.00008901015,0.0002628355],"domain_scores_gemma":[0.99902177,0.000046526282,0.00016802573,0.00053488923,0.00013741395,0.000091369235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001084745,0.00019106045,0.0005456323,0.00034883487,0.000018688965,0.000007139524,0.0002562489,0.00031383184,0.000050288123],"category_scores_gemma":[0.00047809284,0.0001837314,0.00022211758,0.0006455739,0.00013991889,0.0000029369119,0.00026977292,0.00009971969,8.880568e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009648867,0.00007139726,0.044878237,0.0000062806653,0.00040401783,0.000005232202,0.000026949567,0.000389463,0.94264036,0.00022422148,0.000016631888,0.01124074],"study_design_scores_gemma":[0.0014207264,0.00021692946,0.021356354,0.000008486914,0.00072186283,0.000004053975,0.00004825399,0.003942907,0.957078,0.0062788697,0.008560249,0.00036330748],"about_ca_topic_score_codex":0.0012232222,"about_ca_topic_score_gemma":0.00013595514,"teacher_disagreement_score":0.34760618,"about_ca_system_score_codex":0.000015259086,"about_ca_system_score_gemma":0.00005281195,"threshold_uncertainty_score":0.7492349},"labels":[],"label_agreement":null},{"id":"W2411004872","doi":"10.1007/978-1-59745-540-4_4","title":"Reporter-Based Synthetic Genetic Array Analysis: A Functional Genomics Approach for Investigating the Cell Cycle in Saccharomyces cerevisiae","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Saccharomyces cerevisiae; Genetics; Reporter gene; Gene; Functional genomics; Mutant; Computational biology; DNA microarray; Gene expression profiling; Gene expression; Genomics; Genome","score_opus":0.03075723466870068,"score_gpt":0.35546021236707015,"score_spread":0.3247029776983695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411004872","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29686096,0.0015769176,0.70049286,0.00022111702,0.000037689293,0.00044369636,0.000011354944,0.000006210344,0.0003491598],"genre_scores_gemma":[0.47644186,0.00003146706,0.522675,0.0004530121,0.000060942268,0.00014368721,0.00014405955,0.000017116497,0.000032863132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969869,0.0010741602,0.0005466032,0.00076889875,0.00011888549,0.0005045485],"domain_scores_gemma":[0.99891204,0.00011844651,0.00016652534,0.0006337746,0.00008132805,0.00008788805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017703399,0.0002458316,0.0003690854,0.0002715346,0.00008422671,0.00003256852,0.00040988877,0.00027833477,0.000010247475],"category_scores_gemma":[0.00040973755,0.00019658312,0.00026708105,0.0006082622,0.00017794558,0.0000019521813,0.000072181065,0.0002218656,8.203131e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005827023,0.00011401453,0.004080589,0.000023532046,0.00006858675,0.0000034970371,0.00003310347,0.039388772,0.9516752,0.000057730904,0.0000114936865,0.00448524],"study_design_scores_gemma":[0.00079686183,0.00047475297,0.005527025,0.000008035545,0.00011380357,0.000013288483,0.00009464366,0.03244704,0.9559435,0.0030648294,0.0011633947,0.00035277914],"about_ca_topic_score_codex":0.000024372554,"about_ca_topic_score_gemma":0.000019876165,"teacher_disagreement_score":0.17958088,"about_ca_system_score_codex":0.0000384535,"about_ca_system_score_gemma":0.00016504827,"threshold_uncertainty_score":0.80164266},"labels":[],"label_agreement":null},{"id":"W2411007021","doi":"10.1007/978-1-4939-1568-2_12","title":"Human Mast Cell Activation with Viruses and Pathogen Products","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mast cells and histamine","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Mast cell; Immune system; Mast (botany); Biology; Pathogen; Immunology; Cell; Microbiology; Computational biology; Genetics","score_opus":0.016043002372141846,"score_gpt":0.30875021906083755,"score_spread":0.2927072166886957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411007021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5595559,0.001103837,0.43081316,0.00018405917,0.00018570454,0.00033488392,0.000007874985,0.0000471045,0.007767464],"genre_scores_gemma":[0.66184646,0.000015261343,0.33637846,0.0005607649,0.000030537838,0.00004130813,0.00008362096,0.000029251585,0.0010143764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981379,0.0010598298,0.00017790029,0.00037317237,0.000011693105,0.0002395084],"domain_scores_gemma":[0.9995349,0.00007990485,0.000088327,0.00024698593,0.000036329668,0.000013540848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006473431,0.00014632332,0.0002480399,0.00011887394,0.000076814096,0.000006310881,0.000104771345,0.00020223601,0.00010449545],"category_scores_gemma":[0.00009575863,0.00011531662,0.000018335411,0.00011726441,0.00023465989,0.000018806015,0.000067607936,0.00019319812,0.000011540874],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032947337,0.00005269451,0.0022233855,0.00002491645,0.000015783515,0.0000020527568,0.00009303306,0.000002823204,0.9824887,0.006687758,0.000020393356,0.008355526],"study_design_scores_gemma":[0.0008215497,0.00039856564,0.001982139,0.000010456199,0.000015011788,0.000015122429,0.00003006264,0.000003298255,0.91922224,0.0012880923,0.07604958,0.00016386576],"about_ca_topic_score_codex":0.00008545805,"about_ca_topic_score_gemma":0.000017343404,"teacher_disagreement_score":0.10229053,"about_ca_system_score_codex":0.000011585831,"about_ca_system_score_gemma":0.000014173983,"threshold_uncertainty_score":0.47024754},"labels":[],"label_agreement":null},{"id":"W2411035397","doi":"10.1007/978-1-4939-7274-6_17","title":"Model-Free Linkage Analysis of a Binary Trait","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; McGill University Health Centre; Sinai Health System; Lunenfeld-Tanenbaum Research Institute; University Health Network; University of Toronto; Hospital for Sick Children; Public Health Ontario; Princess Margaret Cancer Centre","funders":"Canadian Institutes of Health Research","keywords":"Trait; Linkage (software); Binary number; Genetics; Computer science; Biology; Mathematics; Arithmetic; Gene; Programming language","score_opus":0.04149678739389435,"score_gpt":0.3800750118254721,"score_spread":0.33857822443157776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411035397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.530698,0.00041572395,0.46487293,0.0001409282,0.00007707639,0.00008125836,0.00012794023,0.000005174461,0.003580949],"genre_scores_gemma":[0.57861227,0.00011460481,0.42072845,0.00016498694,0.000019718138,0.0000058833907,0.000083034334,0.00000776536,0.000263306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988147,0.0002558986,0.00024966823,0.00038470796,0.000059196966,0.00023582867],"domain_scores_gemma":[0.9986698,0.000023141907,0.00018291545,0.0010183484,0.00005112385,0.000054667373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007354859,0.00014310474,0.00037043757,0.00020706923,0.00009401625,0.000015935198,0.0007803836,0.0002588169,0.000024855754],"category_scores_gemma":[0.0004863016,0.00013551427,0.0002406582,0.0001135667,0.00020257515,0.0000017636283,0.00046070278,0.000091953254,6.259819e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040926425,0.000054904333,0.009965889,0.000011024586,0.00034561535,0.0000087623475,0.000037452694,0.002190192,0.9836397,0.001112468,0.00008226183,0.002510781],"study_design_scores_gemma":[0.0029352375,0.0011232961,0.08498412,0.000047379766,0.0013250255,0.000011725993,0.0001742866,0.056526203,0.8299142,0.013076333,0.008802467,0.0010796881],"about_ca_topic_score_codex":0.000086628104,"about_ca_topic_score_gemma":0.00003792033,"teacher_disagreement_score":0.15372549,"about_ca_system_score_codex":0.0000044625326,"about_ca_system_score_gemma":0.00003729358,"threshold_uncertainty_score":0.5526112},"labels":[],"label_agreement":null},{"id":"W2411050805","doi":"10.1007/978-1-62703-670-2_9","title":"HIV-1 Rev Function and RNA Nuclear-Cytoplasmic Export","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Cytoplasm; Nuclear export signal; Nucleus; Function (biology); Cell biology; RNA; Messenger RNA; Human immunodeficiency virus (HIV); Gene expression; Subcellular localization; Biology; Rna processing; Cell nucleus; Gene; Virology; Genetics","score_opus":0.015507446293044845,"score_gpt":0.34334840237788217,"score_spread":0.3278409560848373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411050805","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71575236,0.0007535205,0.28152493,0.000288319,0.000090474714,0.00022294594,0.0000020620812,0.00001240791,0.0013529896],"genre_scores_gemma":[0.531393,0.00040042805,0.46442762,0.0017802287,0.0001268152,0.000115398725,0.0000803113,0.00005798327,0.0016182009],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983157,0.00054967526,0.00023333616,0.00046148966,0.00005891572,0.0003809144],"domain_scores_gemma":[0.99940515,0.000031652813,0.00005488294,0.00034594839,0.00005180805,0.00011056019],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006624989,0.00015811669,0.00020111358,0.000108160595,0.00005430504,0.000024947585,0.00016354318,0.00026036773,0.00009624518],"category_scores_gemma":[0.00030532043,0.00014552652,0.00006247944,0.000114136594,0.00013971016,0.0000048117636,0.00019817935,0.00019165811,0.00003431027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003787649,0.000019573285,0.005493834,0.000009827014,0.000024544235,0.0000051800926,0.000008371168,0.0000043208215,0.96881723,0.00076050125,0.00045198709,0.02436674],"study_design_scores_gemma":[0.0019851425,0.0014136292,0.02140326,0.00003197048,0.000027317097,0.0001114969,0.00021933213,0.0015630403,0.9118374,0.012350364,0.048312467,0.00074455276],"about_ca_topic_score_codex":0.00006024418,"about_ca_topic_score_gemma":0.0000044048106,"teacher_disagreement_score":0.18435936,"about_ca_system_score_codex":0.000014376343,"about_ca_system_score_gemma":0.000028258382,"threshold_uncertainty_score":0.59343994},"labels":[],"label_agreement":null},{"id":"W2411062676","doi":"10.1007/978-1-4939-1568-2_4","title":"Human Mast Cell and Basophil/Eosinophil Progenitors","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Progenitor cell; Basophil; Eosinophil; Mast cell; Immunology; Biology; Haematopoiesis; Population; Stem cell; Bone marrow; CD34; Myeloid; Cell biology; Medicine; Immunoglobulin E; Asthma; Antibody","score_opus":0.01731707617020997,"score_gpt":0.3794566958724572,"score_spread":0.36213961970224723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411062676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84453106,0.001910381,0.14866224,0.00033946935,0.00015744225,0.00033520008,0.0000029624441,0.000047601756,0.004013631],"genre_scores_gemma":[0.6201661,0.000010711834,0.3779902,0.0013995948,0.00017380754,0.00003611511,0.000012923278,0.00003148484,0.0001790336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983854,0.0008032741,0.00020759234,0.00031854046,0.00005359452,0.00023159655],"domain_scores_gemma":[0.99947613,0.000057195655,0.00005113844,0.00025381218,0.000028943414,0.00013275999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005352221,0.00014321381,0.0002986338,0.0001425346,0.000047157944,0.0000058281526,0.00007157753,0.0001704631,0.000036725265],"category_scores_gemma":[0.00016469545,0.000114728165,0.00006836106,0.00011763475,0.00020567064,0.000010062232,0.00006870909,0.0001626318,0.0000061533465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023143182,0.000099051285,0.050379876,0.00006319386,0.000011980725,0.000049440332,0.000027166454,0.0000016869022,0.9144222,0.0012185014,0.000026613932,0.033677153],"study_design_scores_gemma":[0.004734034,0.0027055992,0.08871407,0.00010088997,0.00021282889,0.00013075932,0.00012268528,0.000310544,0.7895484,0.015434078,0.0972644,0.0007217331],"about_ca_topic_score_codex":0.000008638734,"about_ca_topic_score_gemma":9.5245423e-7,"teacher_disagreement_score":0.22932796,"about_ca_system_score_codex":0.000014673421,"about_ca_system_score_gemma":0.000026566504,"threshold_uncertainty_score":0.46784788},"labels":[],"label_agreement":null},{"id":"W2411083204","doi":"10.1007/978-1-4939-1438-8_15","title":"Separation of Basic Proteins from Leishmania Using a Combination of Free Flow Electrophoresis (FFE) and 2D Electrophoresis (2-DE) Under Basic Conditions","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Free-flow electrophoresis; Isoelectric focusing; Electrophoresis; Chromatography; Leishmania; Fractionation; Chemistry; Separation method; Gel electrophoresis; Two-dimensional gel electrophoresis; Polyacrylamide gel electrophoresis; Gel electrophoresis of proteins; Biochemistry; Proteomics; Computer science; Enzyme","score_opus":0.024442519906012445,"score_gpt":0.39448146147330193,"score_spread":0.3700389415672895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411083204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5142991,0.00028408956,0.4845427,0.00035790054,0.000012401945,0.00033005295,0.000031105414,0.000008434259,0.00013424079],"genre_scores_gemma":[0.59453005,0.000083391424,0.40508914,0.00009660645,0.000020082718,0.00005503081,0.00009502073,0.000015773576,0.000014923185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997778,0.001122075,0.00037619128,0.00030415648,0.00012881965,0.00029076234],"domain_scores_gemma":[0.9987525,0.00036869722,0.0001507629,0.00046272893,0.00018153375,0.00008378444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000277246,0.0001349776,0.00041135863,0.00034848196,0.000054492448,0.000007981074,0.00013844455,0.00018911585,0.00007108005],"category_scores_gemma":[0.0011598319,0.0001305189,0.00007914923,0.00045042316,0.00026318713,0.00003372791,0.000065122804,0.00021195755,8.3247016e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104408624,0.00015323349,0.0021374542,0.00003751404,0.00007427863,0.0000014857627,0.000060250277,0.000028352988,0.98180914,0.012541684,0.000041901898,0.0030103242],"study_design_scores_gemma":[0.0013404115,0.0007881523,0.11699526,0.000038758863,0.00008001061,0.000014553909,0.000028946617,0.008404418,0.8118691,0.060186125,0.00015193765,0.000102329126],"about_ca_topic_score_codex":0.0005275846,"about_ca_topic_score_gemma":0.00007537701,"teacher_disagreement_score":0.16994001,"about_ca_system_score_codex":0.000118263124,"about_ca_system_score_gemma":0.00016605723,"threshold_uncertainty_score":0.5322406},"labels":[],"label_agreement":null},{"id":"W2411091386","doi":"10.1007/978-1-61779-986-0_26","title":"Isotope Techniques to Study Kinetics of Na+ and K+ Transport Under Salinity Conditions","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"TRACER; Tracing; Potassium; Salinity; Sodium; Chemistry; Efflux; Environmental chemistry; Ion; Isotope; Ion transporter; Kinetics; TRACE (psycholinguistics); Radiochemistry; Environmental science; Analytical Chemistry (journal); Geology; Oceanography; Physics; Computer science; Biochemistry; Nuclear physics; Organic chemistry","score_opus":0.047331630834168796,"score_gpt":0.37335054052185396,"score_spread":0.32601890968768515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411091386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9681231,0.00044135805,0.030550728,0.00016845988,0.00007690702,0.0003568604,0.000049388,0.000020118003,0.00021307815],"genre_scores_gemma":[0.87980825,0.00007171978,0.11959779,0.0004168618,0.000030990508,0.000034325818,0.000027411155,8.0072823e-7,0.000011872494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884176,0.0005223258,0.00021953974,0.00016439054,0.00004638748,0.00020556957],"domain_scores_gemma":[0.9996364,0.00015771564,0.000046341538,0.000055445893,0.000026846576,0.000077241515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073570997,0.00009405248,0.00023259486,0.000031428037,0.000024625671,0.0000024506862,0.00011423955,0.00010425923,0.000041754793],"category_scores_gemma":[0.0000658991,0.000041285555,0.0000367136,0.0002441469,0.00006008907,0.000021020724,0.000043886997,0.0000835488,9.264673e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010506936,0.00027987387,0.04887375,0.000001089625,0.0000092087175,0.000001367259,0.00009848301,2.1487735e-7,0.9125062,0.0022942396,0.000003435673,0.035921626],"study_design_scores_gemma":[0.000111411166,0.00040090177,0.4153955,0.0000045979286,0.000022914555,0.0000055152245,0.00023757954,4.378733e-7,0.56756,0.002600922,0.01354647,0.000113734124],"about_ca_topic_score_codex":0.00007826149,"about_ca_topic_score_gemma":0.000036509515,"teacher_disagreement_score":0.36652175,"about_ca_system_score_codex":0.000004179167,"about_ca_system_score_gemma":0.0000017909009,"threshold_uncertainty_score":0.16835761},"labels":[],"label_agreement":null},{"id":"W2411132881","doi":"10.1007/978-1-4939-3073-9_14","title":"Determination of the Substrate Specificity of Protein Kinases with Peptide Micro- and Macroarrays","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Kinexus Bioinformatics Corporation (Canada)","funders":"","keywords":"In silico; Kinase; Peptide; Computational biology; Protein Array Analysis; Substrate specificity; DNA microarray; Phosphorylation; Substrate (aquarium); Biochemistry; Proteomics; Protein microarray; Computer science; Biology; Enzyme; Gene expression; Gene","score_opus":0.024725077326662608,"score_gpt":0.35715124472365284,"score_spread":0.3324261673969902,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411132881","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5100287,0.00015795593,0.48936674,0.00005705401,0.000007976556,0.00019075072,0.0000076277233,0.0000029568223,0.00018019011],"genre_scores_gemma":[0.37296832,0.000012990284,0.62693244,0.000022317132,0.000006347254,0.000014283218,0.0000061845262,0.000006406122,0.000030724397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992341,0.00024753716,0.00017867963,0.00020112025,0.00003679935,0.00010177229],"domain_scores_gemma":[0.99944055,0.000013339044,0.00014411533,0.00028659264,0.00009198716,0.000023394505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034260337,0.00008873559,0.00013619242,0.0000307089,0.00001564993,0.0000022409486,0.00012433254,0.00010259801,5.46156e-7],"category_scores_gemma":[0.00011523709,0.00006179261,0.000030769963,0.00011550911,0.00031424433,0.000001293413,0.00008662989,0.000061745,3.7573386e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039172526,0.000025787267,0.0017927213,0.000009806903,0.0000044145054,6.844216e-7,0.000014909624,0.000007712279,0.9934623,0.0009235138,0.0000040221084,0.0037149119],"study_design_scores_gemma":[0.00019956223,0.00021536533,0.0007579266,0.00001831525,0.000006447468,0.000013958484,0.000036210862,0.0000269596,0.991998,0.0056942273,0.00095924793,0.000073789],"about_ca_topic_score_codex":0.000032461623,"about_ca_topic_score_gemma":0.000032213276,"teacher_disagreement_score":0.13756569,"about_ca_system_score_codex":0.0000066144057,"about_ca_system_score_gemma":0.000034781497,"threshold_uncertainty_score":0.25198296},"labels":[],"label_agreement":null},{"id":"W2411164352","doi":"10.1007/978-1-61779-197-0_9","title":"Array-Based Synthetic Genetic Screens to Map Bacterial Pathways and Functional Networks in Escherichia coli","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Epistasis; Genetic Fitness; Mutant; Biology; Gene; Phenotype; Genetic screen; Genetics; Computational biology; Function (biology); Mutation","score_opus":0.023117125593077218,"score_gpt":0.28227603036319865,"score_spread":0.25915890477012143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411164352","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4391808,0.0006499313,0.5596422,0.000036470115,0.00018670883,0.00019256031,0.0000044101944,0.000008120952,0.00009884073],"genre_scores_gemma":[0.48524734,0.000026677766,0.51393867,0.00047410233,0.00011346423,0.00008814574,0.00005798775,0.000035620556,0.000017991939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99679184,0.001354436,0.00044144513,0.00080941804,0.000074749856,0.00052810746],"domain_scores_gemma":[0.9990819,0.00004666529,0.000100176025,0.00055263424,0.000055192195,0.00016341657],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093815423,0.00030360703,0.00040808474,0.00022945748,0.00004538474,0.000013307794,0.00022653156,0.00044186544,0.00008643403],"category_scores_gemma":[0.00014887609,0.00031491375,0.00012797673,0.00034465294,0.0001825947,0.0000020054463,0.00016395649,0.00018535332,0.0000050551585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023211152,0.00007413148,0.012784741,0.000008779492,0.000055997887,0.000016875822,0.000027999726,0.00490897,0.97814465,0.00013808561,0.000028062157,0.0035795993],"study_design_scores_gemma":[0.002026276,0.0010681023,0.087477975,0.000047862508,0.0001192703,0.000022258473,0.000065712586,0.0067957975,0.89237475,0.0019290954,0.0069589075,0.0011139815],"about_ca_topic_score_codex":0.00006051325,"about_ca_topic_score_gemma":0.00016874737,"teacher_disagreement_score":0.085769884,"about_ca_system_score_codex":0.000031392807,"about_ca_system_score_gemma":0.00008712348,"threshold_uncertainty_score":0.9999303},"labels":[],"label_agreement":null},{"id":"W2411183661","doi":"10.1007/978-1-4939-2877-4_1","title":"Electrophoretic Mobility Shift Assay Using Radiolabeled DNA Probes","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Electrophoretic mobility shift assay; Electrophoresis; DNA; Chemistry; Biophysics; Stoichiometry; Molecule; Biochemistry; Biology; Transcription factor; Physical chemistry","score_opus":0.027643382109409788,"score_gpt":0.3994012983441067,"score_spread":0.3717579162346969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411183661","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38318256,0.0010158981,0.6152,0.000071398434,0.00007946538,0.00021495348,0.0000045848583,0.000036889607,0.00019424107],"genre_scores_gemma":[0.4481134,0.000039657654,0.5514674,0.0002077628,0.000058448837,0.000017790331,0.0000484429,0.000024426736,0.000022613747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959945,0.002137424,0.00044700666,0.0007836925,0.00010874417,0.0005286014],"domain_scores_gemma":[0.99884474,0.000046255493,0.00015071417,0.0006835578,0.00013611278,0.00013858765],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002654512,0.00030864822,0.00045521522,0.00016742984,0.00005485608,0.000018507744,0.0003220898,0.00047099704,0.000002095583],"category_scores_gemma":[0.0011643087,0.00027161164,0.00017026748,0.0004038369,0.00034678372,0.0000035945552,0.00020204957,0.00025091425,0.0000012953301],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008760384,0.00009410599,0.002146008,0.000007396355,0.000054330336,0.000013562849,0.000020176958,0.000044458593,0.9929981,0.0003662945,0.000022676784,0.004145235],"study_design_scores_gemma":[0.00043965262,0.00043720877,0.00007946443,0.000010654371,0.000039424227,0.00004066404,0.000027932472,0.0008794535,0.98485875,0.010680837,0.0021579408,0.00034799232],"about_ca_topic_score_codex":0.00005263662,"about_ca_topic_score_gemma":0.000027546628,"teacher_disagreement_score":0.06493085,"about_ca_system_score_codex":0.00009265333,"about_ca_system_score_gemma":0.00015676778,"threshold_uncertainty_score":0.9999736},"labels":[],"label_agreement":null},{"id":"W2411203959","doi":"10.1007/978-1-61779-376-9_20","title":"Chromatin Endogenous Cleavage and Psoralen Crosslinking Assays to Analyze rRNA Gene Chromatin In Vivo","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Elitenetzwerk Bayern; Natural Sciences and Engineering Research Council of Canada; Bayerische Forschungsallianz","keywords":"Chromatin; ChIA-PET; Biology; ChIP-sequencing; ChIP-on-chip; Nucleosome; Genetics; Gene; Chromatin remodeling; Molecular biology; Cell biology","score_opus":0.02687341215384483,"score_gpt":0.32523745855486946,"score_spread":0.29836404640102465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411203959","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78390825,0.00087395636,0.2127398,0.00003456361,0.00012030425,0.00036059634,0.000028993192,0.000015165738,0.0019183529],"genre_scores_gemma":[0.46185544,0.0001205558,0.53749776,0.0003364357,0.000038081595,0.000053420812,0.000027158318,0.000040428393,0.000030695966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99710166,0.0007812433,0.0006205971,0.00079791737,0.00007929506,0.0006192972],"domain_scores_gemma":[0.9989848,0.00004364307,0.00016523345,0.0006200598,0.000043687753,0.00014253374],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014513745,0.00034366365,0.0004870492,0.00026513453,0.00006757652,0.000027757136,0.0004492599,0.00043400654,0.000039311202],"category_scores_gemma":[0.0002840635,0.00036082088,0.0001039708,0.0003042186,0.00015525211,0.0000043231125,0.00048030145,0.00021936488,0.000005183489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044382003,0.00008364316,0.009594218,0.000025660978,0.000042929645,0.000067129266,0.0004426826,0.000101907586,0.9834059,0.00033139318,0.000014447992,0.0058457353],"study_design_scores_gemma":[0.000834541,0.000492249,0.006401264,0.000025916703,0.000019135197,0.00010694636,0.000107804684,0.0009073818,0.98726285,0.0026299108,0.0007241761,0.00048782612],"about_ca_topic_score_codex":0.000285594,"about_ca_topic_score_gemma":0.00031508916,"teacher_disagreement_score":0.324758,"about_ca_system_score_codex":0.000053232456,"about_ca_system_score_gemma":0.00006796545,"threshold_uncertainty_score":0.99988437},"labels":[],"label_agreement":null},{"id":"W2411208702","doi":"10.1007/978-1-62703-980-2_2","title":"Diversity and Evolution of Spliceosomal Systems","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Evolutionary biology; RNA splicing; Lineage (genetic); Intron; Alternative splicing; Genome; Genetics; Context (archaeology); Gene; Computational biology; Exon; RNA; Paleontology","score_opus":0.017460605821326795,"score_gpt":0.3519075338290022,"score_spread":0.3344469280076754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411208702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5351006,0.00073674903,0.46384272,0.00001272189,0.00004152331,0.00006352102,0.0000012427505,0.0000022103418,0.00019872814],"genre_scores_gemma":[0.92043436,0.00004302799,0.07935704,0.000029735244,0.00003078586,0.000006778134,0.000005910426,0.000006671801,0.000085701016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849296,0.00083374785,0.00015652693,0.0002611867,0.00005165513,0.00020393735],"domain_scores_gemma":[0.9995742,0.000043677457,0.00005539113,0.00022770408,0.00004564228,0.000053418054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011173249,0.00008536751,0.00017492431,0.00008611924,0.00010715526,0.0000027743538,0.00014818992,0.00016267721,0.0000012634315],"category_scores_gemma":[0.0004054938,0.00008028314,0.00003971847,0.0000870918,0.00013805363,0.0000014422213,0.000843865,0.00008095616,3.9445993e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003341248,0.000013307359,0.09683716,0.000021116448,0.000014758112,0.0000010254797,0.000017218508,0.000042661166,0.8944079,0.0065371604,0.000003215866,0.0020710612],"study_design_scores_gemma":[0.0018722278,0.0015058664,0.079790466,0.000043782908,0.000028319073,0.00004716311,0.00017090919,0.008255928,0.89877087,0.005459009,0.0036040884,0.00045137637],"about_ca_topic_score_codex":0.0003555663,"about_ca_topic_score_gemma":0.000015724578,"teacher_disagreement_score":0.38533375,"about_ca_system_score_codex":0.000013690485,"about_ca_system_score_gemma":0.00001674671,"threshold_uncertainty_score":0.32738516},"labels":[],"label_agreement":null},{"id":"W2411284488","doi":"10.1007/978-1-4939-3061-6_5","title":"Dying with Style: Death Decision in Plant Embryogenesis","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Somatic embryogenesis; Suspensor; Biology; Embryogenesis; Zygote; Embryo; Cell biology; Somatic cell; Meristem; Programmed cell death; Gymnosperm; Botany; Genetics; Apoptosis","score_opus":0.0648244725750119,"score_gpt":0.4238524868746365,"score_spread":0.3590280142996246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411284488","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018214835,0.7854026,0.21351048,0.0000065601403,0.00017156609,0.00046892575,0.0000457487,0.000008770877,0.00020320683],"genre_scores_gemma":[0.0000029469854,0.7255369,0.2724042,0.00004988439,0.000096699616,0.00013803711,0.0015446291,0.000050895756,0.00017580835],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963327,0.0016210806,0.000616427,0.00089466793,0.00010957189,0.00042556383],"domain_scores_gemma":[0.99894565,0.00008179786,0.00024137851,0.00057304546,0.00006188767,0.00009621504],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001355575,0.0005097844,0.0012970028,0.0003139607,0.00003503644,0.000019580048,0.00042577836,0.0011243409,0.000005634176],"category_scores_gemma":[0.00022592858,0.00035313718,0.00016804264,0.00034756676,0.00006954019,0.0000026451112,0.00018903591,0.00034015195,0.0000063311118],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007642516,0.00006992673,0.00011106242,0.0005564981,0.00014033454,0.00022909284,0.000022376025,0.00005872061,0.06283786,0.00010655883,0.0002023022,0.93558884],"study_design_scores_gemma":[0.00046974313,0.0002617994,0.0000035677742,0.0012126287,0.00014492137,0.0004547064,0.000009449597,0.000015573054,0.0067974925,0.00006308796,0.9900197,0.0005473549],"about_ca_topic_score_codex":0.00010630786,"about_ca_topic_score_gemma":0.00052364887,"teacher_disagreement_score":0.9898174,"about_ca_system_score_codex":0.00009459124,"about_ca_system_score_gemma":0.00047717438,"threshold_uncertainty_score":0.99989206},"labels":[],"label_agreement":null},{"id":"W2411309869","doi":"10.1007/978-1-4939-0320-7_19","title":"Laser Speckle Contrast Imaging to Measure Changes in Cerebral Blood Flow","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Thermoregulation and physiological responses","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Speckle pattern; Blood flow; Speckle imaging; Cerebral blood flow; Laser; Biomedical engineering; Laser Doppler velocimetry; Optics; Computer science; Computer vision; Medicine; Radiology; Physics; Internal medicine","score_opus":0.029688721803551393,"score_gpt":0.3785648406797445,"score_spread":0.3488761188761931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411309869","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57547474,0.00018624021,0.42030153,0.0025898095,0.0001271221,0.0003345396,0.0000047239173,0.000037635262,0.00094364415],"genre_scores_gemma":[0.5687568,0.0000035755074,0.42556825,0.005451823,0.00007372987,0.000030412635,0.000011172978,0.000014285078,0.00008993679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99747235,0.0016692153,0.00019876493,0.00030667588,0.00006524491,0.0002877476],"domain_scores_gemma":[0.99924505,0.00035100422,0.00003587222,0.00023208128,0.000035374604,0.00010063056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012973641,0.0001336808,0.00037289743,0.00018529661,0.000015221029,0.0000052436917,0.00009493731,0.00011399338,0.00021668022],"category_scores_gemma":[0.0018989431,0.00010407547,0.000054889795,0.00023978486,0.000070963615,0.000007846501,0.000053157066,0.00018119861,0.000012520324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003243115,0.000063707856,0.0062159677,0.0000061586275,0.000011213384,0.000025653551,0.000064202875,0.00003179135,0.8386377,0.00072783255,0.0000121998155,0.15387924],"study_design_scores_gemma":[0.003342698,0.0005906529,0.35201615,0.000098141325,0.000039428593,0.000040435894,0.00006196171,0.0034706746,0.6270049,0.0057116244,0.0073105088,0.00031281062],"about_ca_topic_score_codex":0.000023363447,"about_ca_topic_score_gemma":0.000053654243,"teacher_disagreement_score":0.34580016,"about_ca_system_score_codex":0.000022913397,"about_ca_system_score_gemma":0.000020058787,"threshold_uncertainty_score":0.42440745},"labels":[],"label_agreement":null},{"id":"W2411316645","doi":"10.1007/978-1-59745-304-2_10","title":"Genotyping of Single Nucleotide Polymorphisms by Arrayed Primer Extension","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Primer extension; Genotyping; Oligonucleotide; DNA microarray; Computational biology; Biology; Genotype; Genetics; Nucleic acid; Primer (cosmetics); Single-nucleotide polymorphism; Nucleotide; Molecular biology; DNA; Chemistry; Gene; Gene expression","score_opus":0.02360620554941697,"score_gpt":0.35967024708045575,"score_spread":0.3360640415310388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411316645","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2545276,0.0025796006,0.7415648,0.00008164934,0.00023380542,0.00012720701,0.0000034086343,0.000008548521,0.00087336986],"genre_scores_gemma":[0.5626859,0.00009837094,0.43626,0.000574919,0.00006944085,0.000011601086,0.00008340535,0.00003176527,0.00018459308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983538,0.00040864613,0.00040228615,0.0004598407,0.00007328509,0.000302163],"domain_scores_gemma":[0.9991836,0.00003403546,0.00017954502,0.00046100988,0.000073970965,0.00006787174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011214552,0.00015629957,0.00022060653,0.00013470375,0.000029834127,0.0000042303136,0.00021038017,0.00028242578,0.000021101965],"category_scores_gemma":[0.00020929644,0.00015162404,0.00009133088,0.00021323565,0.00013531427,0.0000019971515,0.00010124888,0.00010423495,0.0000020003074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009961478,0.000084321655,0.00107353,0.00000558666,0.000017231936,0.000001804534,0.000024867672,0.000007142234,0.9637704,0.00021360184,0.0002115131,0.03449037],"study_design_scores_gemma":[0.00037229471,0.00018761356,0.0015456215,0.000011880318,0.000008345966,0.0000050681997,0.000043307413,0.000013833191,0.9679637,0.0005251167,0.029162128,0.00016109922],"about_ca_topic_score_codex":0.0000279113,"about_ca_topic_score_gemma":0.0000053565354,"teacher_disagreement_score":0.30815828,"about_ca_system_score_codex":0.00002316741,"about_ca_system_score_gemma":0.000034801455,"threshold_uncertainty_score":0.6183049},"labels":[],"label_agreement":null},{"id":"W2411411525","doi":"10.1007/978-1-61779-582-4_4","title":"The Essentials of Computational Molecular Evolution","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Agriculture and Agri-Food Canada; University of Ottawa; Ontario Genomics","funders":"","keywords":"Evolutionary biology; Molecular evolution; Population; Biology; Computer science; Computational biology; Phylogenetics; Genetics; Gene; Demography; Sociology","score_opus":0.04236087227083042,"score_gpt":0.4244603291842401,"score_spread":0.3820994569134097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411411525","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000054604734,0.6714333,0.32760522,0.000011920426,0.00031906262,0.00034759636,0.00003156736,0.0000017012015,0.00019495821],"genre_scores_gemma":[0.00029983756,0.82319206,0.17602368,0.000027457543,0.000098341785,0.00013112095,0.00014504243,0.00004876755,0.000033713506],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9960044,0.0021452163,0.0008240999,0.00049117213,0.00009632023,0.0004387988],"domain_scores_gemma":[0.9985069,0.00024113087,0.00048798017,0.0005970717,0.00011127846,0.000055659075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016427434,0.0003854753,0.0009959693,0.00012854619,0.00007809867,0.000010501043,0.0005309554,0.0005542931,0.0000041767453],"category_scores_gemma":[0.0002789906,0.00028489402,0.000514151,0.00023136553,0.00035716358,4.0036397e-7,0.0004316843,0.00021429405,0.0000036989813],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014946629,0.00007301248,0.000051650528,0.00090951246,0.0006914607,0.0000034666623,0.000013593069,0.00017071643,0.12126944,0.016266296,0.000028073317,0.86050785],"study_design_scores_gemma":[0.00020514861,0.00013185423,0.000022667546,0.00019682392,0.00040608863,0.000031917192,0.000011726961,0.000009198558,0.0054660114,0.013924867,0.97918475,0.00040896295],"about_ca_topic_score_codex":0.00001546472,"about_ca_topic_score_gemma":0.000005849384,"teacher_disagreement_score":0.9791567,"about_ca_system_score_codex":0.000036598994,"about_ca_system_score_gemma":0.00020459965,"threshold_uncertainty_score":0.9999603},"labels":[],"label_agreement":null},{"id":"W2411433299","doi":"10.1007/978-1-59745-553-4_1","title":"PCR–ELISA for High-Throughput Blood Group Genotyping","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Blood groups and transfusion","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Héma-Québec","funders":"","keywords":"Genotyping; Amplicon; Antigen; genomic DNA; Serology; Blood group antigens; Genotype; Polymerase chain reaction; Computational biology; Biology; Immunology; Gene; Antibody; Genetics","score_opus":0.06160159272746762,"score_gpt":0.45140766225115936,"score_spread":0.38980606952369173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411433299","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000056915846,0.5508316,0.447157,0.00006220308,0.00029876403,0.0014065569,0.000020503345,0.00003744451,0.00018020325],"genre_scores_gemma":[6.232194e-7,0.5186678,0.48013082,0.00038157182,0.00018191886,0.00020366505,0.00033965323,0.000059407652,0.00003452491],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99584514,0.0013739312,0.001003322,0.0010284284,0.00010236171,0.0006468087],"domain_scores_gemma":[0.9982835,0.00052160624,0.00026280945,0.00074876135,0.0000610882,0.00012225386],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018446912,0.0006139928,0.0031706784,0.00042300223,0.00006520025,0.000013615643,0.00030363235,0.0013383019,0.00003733197],"category_scores_gemma":[0.0003470658,0.0004852677,0.00084088976,0.0004778303,0.0001098934,0.000018425046,0.000088849476,0.0007935318,0.000007290314],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029937471,0.00024227897,0.0000055760306,0.0055508297,0.00038717102,0.000116233605,0.000016791242,1.6207265e-7,0.0034279427,0.011577461,0.000014520477,0.9786311],"study_design_scores_gemma":[0.0021612444,0.0010949925,0.0000108247905,0.0049756304,0.00435945,0.00029264126,0.0000035923294,0.0000046411365,0.0008726822,0.009574657,0.97609425,0.000555415],"about_ca_topic_score_codex":0.000050399867,"about_ca_topic_score_gemma":0.0000102968015,"teacher_disagreement_score":0.9780757,"about_ca_system_score_codex":0.00007355255,"about_ca_system_score_gemma":0.00015028635,"threshold_uncertainty_score":0.99995816},"labels":[],"label_agreement":null},{"id":"W2411493126","doi":"10.1007/978-1-62703-547-7_28","title":"Challenges in Experimental Modeling of Ovarian Cancerogenesis","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Ovarian cancer; Carcinogenesis; Disease; Cancer; Computational biology; Bioinformatics; Biology; Cancer research; Medicine; Pathology; Internal medicine","score_opus":0.10977372637334461,"score_gpt":0.4405084622758633,"score_spread":0.33073473590251873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411493126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59169817,0.053436086,0.3486002,0.00072967034,0.00021828664,0.00053999666,0.000002131955,0.000014462357,0.0047610104],"genre_scores_gemma":[0.5127739,0.00085986295,0.48612,0.00011950972,0.000015636064,0.00009014712,0.0000023333878,0.000011265745,0.00000738068],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988417,0.00034631416,0.0002885669,0.00026500257,0.000049102124,0.00020928524],"domain_scores_gemma":[0.99960077,0.000038482933,0.000044234366,0.00023732804,0.000031001604,0.00004819841],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051144423,0.00010407181,0.0003888973,0.00018335416,0.000006038391,0.0000015387891,0.000071469425,0.00011357654,0.00013453413],"category_scores_gemma":[0.000064006934,0.00009318449,0.00007172793,0.0001484644,0.000046951816,0.000013985918,0.000049979168,0.00009963473,0.0000020020207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036699355,0.00008783596,0.0010022986,0.000033505807,0.000024568255,0.000010612997,0.00024210317,0.0002589262,0.8821595,0.0009049957,0.000001161045,0.11523784],"study_design_scores_gemma":[0.0012637909,0.00020373332,0.00068447326,0.000053396227,0.000019529924,0.000015987987,0.000616393,0.005365535,0.9897225,0.0015508923,0.0003807303,0.00012304683],"about_ca_topic_score_codex":0.0020878639,"about_ca_topic_score_gemma":0.000097802505,"teacher_disagreement_score":0.13751976,"about_ca_system_score_codex":0.00006989147,"about_ca_system_score_gemma":0.000050692404,"threshold_uncertainty_score":0.37999532},"labels":[],"label_agreement":null},{"id":"W2411506885","doi":"10.1007/978-1-4939-2428-8_8","title":"Longitudinal Studies 5: Development of Risk Prediction Models for Patients with Chronic Disease","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Seven Oaks General Hospital","funders":"","keywords":"Kidney disease; Intensive care medicine; Disease; Medicine; Chronic disease; Risk analysis (engineering); Internal medicine","score_opus":0.44025892566942737,"score_gpt":0.5179153397084192,"score_spread":0.07765641403899182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411506885","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13346821,0.0074942824,0.8575669,0.00025259383,0.00028604068,0.00064200355,0.00022868814,0.000011952269,0.000049317186],"genre_scores_gemma":[0.11949466,0.000091212874,0.87972087,0.00018148893,0.000050519633,0.0003475237,0.00008329674,0.000019964184,0.00001044761],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9966836,0.0006901376,0.0019175111,0.00041915692,0.000041366184,0.00024823757],"domain_scores_gemma":[0.99774444,0.0006153327,0.0010980559,0.0002716059,0.00016031098,0.00011023925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.012600181,0.00013459077,0.00067809114,0.00024566363,0.00005392719,0.0000053775584,0.00013362797,0.000088253975,0.000004856095],"category_scores_gemma":[0.0049524135,0.0001393843,0.000053006763,0.00012327322,0.00009364682,0.00011010981,0.00005316813,0.00007953351,0.000007945764],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025689116,0.0002868468,0.92386055,0.0005355231,0.00032065675,5.156445e-7,0.0030304117,0.012701209,0.000011593968,0.05346813,0.00020912087,0.0053185476],"study_design_scores_gemma":[0.00999293,0.0014441541,0.21762803,0.00028784183,0.00008428744,8.8492305e-7,0.0008859623,0.06338071,0.0003297448,0.6897058,0.01529141,0.00096825795],"about_ca_topic_score_codex":0.00003885085,"about_ca_topic_score_gemma":0.000051761675,"teacher_disagreement_score":0.70623255,"about_ca_system_score_codex":0.00057447114,"about_ca_system_score_gemma":0.00025381686,"threshold_uncertainty_score":0.5928859},"labels":[],"label_agreement":null},{"id":"W2411524011","doi":"10.1007/978-1-59745-261-8","title":"Membrane Trafficking","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Molecular Junctions and Nanostructures","field":"Engineering","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"David Geffen School of Medicine, University of California, Los Angeles; Leonard M. Miller School of Medicine; Directorate for Biological Sciences; Karl-Franzens-Universität Graz; Stony Brook University; Universidad de Zaragoza; Hospital for Sick Children; University of Toronto; Albert-Ludwigs-Universität Freiburg; Children's Medical Research; University of New South Wales; Medical Research Council; Universität Heidelberg; Universitetet i Bergen; St. John's University; Technische Universität Kaiserslautern; Universität Basel; University of Miami; Rheinische Friedrich-Wilhelms-Universität Bonn; Helsingin Yliopisto; University of Arkansas for Medical Sciences; Leonard M. Miller School of Medicine, University of Miami; Virginia Polytechnic Institute and State University","keywords":"Membrane; Convergence (economics); Yeast; Biology; Cell biology; Computational biology; Biochemistry; Economics","score_opus":0.013928055075360405,"score_gpt":0.3087863142656953,"score_spread":0.2948582591903349,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411524011","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000096258686,0.006886884,0.7597689,0.000010557433,0.0012631628,0.00024059376,0.000015376445,0.00023134606,0.23148689],"genre_scores_gemma":[0.000115908006,0.0020801802,0.951644,0.00023219749,0.00023199849,0.000060279188,0.00023892724,0.000253018,0.04514347],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99830294,0.0003464566,0.00043172014,0.00042881342,0.000087026165,0.00040304134],"domain_scores_gemma":[0.999231,0.00011623553,0.00005931926,0.0005015869,0.000026475574,0.000065377484],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031389997,0.00042888438,0.00064760057,0.00051342073,0.000037403028,0.000010483456,0.00030529435,0.0009954276,0.00010653648],"category_scores_gemma":[0.00007732303,0.0004374913,0.00023311112,0.00017874068,0.00012782437,0.000013008044,0.00006154878,0.0008209558,0.000018495748],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016847527,0.000024352921,0.000010772503,0.00030685964,0.0004530057,0.0009157268,0.00016786472,0.016358266,0.78721935,0.026605554,0.0076036165,0.16031778],"study_design_scores_gemma":[0.00044462597,0.00006800786,0.000009707144,0.000088411216,0.00006319547,0.00023571635,0.0000033253798,0.0019146188,0.09811431,0.009452959,0.8887173,0.0008878516],"about_ca_topic_score_codex":0.000004682654,"about_ca_topic_score_gemma":0.0000070133196,"teacher_disagreement_score":0.88111365,"about_ca_system_score_codex":0.00014932305,"about_ca_system_score_gemma":0.00008424269,"threshold_uncertainty_score":0.9998077},"labels":[],"label_agreement":null},{"id":"W2411577483","doi":"10.1007/978-1-4939-0354-2_14","title":"Salvage or Recovery of Failed Targets by In Situ Proteolysis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Wellcome Trust","keywords":"Proteolysis; In situ; Proteases; Computational biology; Chemistry; Cell biology; Biochemistry; Biology; Nanotechnology; Biophysics; Materials science; Enzyme; Organic chemistry","score_opus":0.011509218613275748,"score_gpt":0.3332809842978618,"score_spread":0.32177176568458604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411577483","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22228624,0.00016701475,0.77582973,0.000056784043,0.0003315471,0.00016836848,0.0000040433642,0.000014095185,0.0011422022],"genre_scores_gemma":[0.22510523,0.000010701688,0.77445495,0.0002435497,0.000024429863,0.00004388737,0.000012790101,0.000011205444,0.00009327752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973198,0.0017560772,0.00032886147,0.0003161764,0.00005631655,0.0002227618],"domain_scores_gemma":[0.9993558,0.00021492591,0.000118852324,0.00026156518,0.000024124254,0.0000247248],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018737363,0.00011324659,0.0003392318,0.00014419996,0.00001427355,0.0000061130163,0.0001729809,0.00018950259,0.0002020719],"category_scores_gemma":[0.0010729824,0.00008566772,0.00004759347,0.00025428375,0.000086850974,0.000034615106,0.00006473568,0.000115077586,0.0000065706986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009228904,0.000019176292,0.0006339241,0.000017256798,0.0000042136257,0.000003184066,0.000051041607,0.000028015977,0.9856203,0.00037419493,0.000058538448,0.013097863],"study_design_scores_gemma":[0.00032575836,0.0002175471,0.0006568125,0.000010025613,0.0000061830574,0.0000017254297,0.000013615673,0.00004985297,0.98679525,0.010067329,0.00175249,0.00010342879],"about_ca_topic_score_codex":0.000110709436,"about_ca_topic_score_gemma":0.00010605431,"teacher_disagreement_score":0.012994435,"about_ca_system_score_codex":0.000025098032,"about_ca_system_score_gemma":0.000019762138,"threshold_uncertainty_score":0.34934285},"labels":[],"label_agreement":null},{"id":"W2411586575","doi":"10.1007/978-1-59745-188-8_22","title":"Mammalian Two-Hybrid Assay for Detecting Protein-Protein Interactions in Vivo","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Public Health Agency of Canada","funders":"Public Health Agency; Public Health Agency of Canada","keywords":"Computational biology; Cloning (programming); Biology; Two-hybrid screening; Protein–protein interaction; Yeast; Cell biology; Genetics; Computer science; Programming language","score_opus":0.037502766401641414,"score_gpt":0.3764247529892984,"score_spread":0.338921986587657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411586575","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43684745,0.00025561044,0.56079596,0.00009628675,0.00013340137,0.0008748022,0.00002496462,0.000016287519,0.00095523824],"genre_scores_gemma":[0.5124623,0.0000074198583,0.48582432,0.00020281931,0.00011591537,0.00085065246,0.000039164508,0.00003973166,0.00045763445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966885,0.0015080174,0.00047988148,0.00068751775,0.00006525304,0.0005708554],"domain_scores_gemma":[0.9991287,0.000091370275,0.00015012287,0.00046833136,0.00007619766,0.00008526252],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017460609,0.00027866074,0.00034461348,0.00022913374,0.00011004445,0.000012150605,0.000314037,0.0001860997,0.00005317625],"category_scores_gemma":[0.0013190904,0.00029062745,0.00017860101,0.00021812158,0.00014206803,0.000005263546,0.00017098601,0.0003268869,0.0000045329616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013180917,0.0000671804,0.0010516471,0.0000259603,0.000022590852,0.00003756471,0.000046112873,0.00004861775,0.98790306,0.0005845872,0.000017564957,0.010063323],"study_design_scores_gemma":[0.0010555449,0.00030391433,0.00005387995,0.000034466513,0.0000055814958,0.000106154665,0.000029159155,0.00024208325,0.97591054,0.0044393046,0.017490989,0.00032835078],"about_ca_topic_score_codex":0.00013826248,"about_ca_topic_score_gemma":0.00016452085,"teacher_disagreement_score":0.07561491,"about_ca_system_score_codex":0.00004987475,"about_ca_system_score_gemma":0.00010308948,"threshold_uncertainty_score":0.9999546},"labels":[],"label_agreement":null},{"id":"W2411617147","doi":"10.1007/978-1-4939-3130-9_9","title":"Synthetic Approach to Biotinylated Glyco-Functionalized Quantum Dots: A New Fluorescent Probes for Biomedical Applications","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Fluorescence; Biotinylation; Nanotechnology; Quantum dot; Confocal microscopy; Chemistry; Materials science; Biophysics; Biochemistry; Biology; Cell biology; Optics; Physics","score_opus":0.03578799343500142,"score_gpt":0.40006525229184575,"score_spread":0.3642772588568443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411617147","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0021867468,0.0008304236,0.99480367,0.00058318477,0.00010458144,0.0010746265,0.000035564917,0.000070447146,0.00031075024],"genre_scores_gemma":[0.013734957,0.000043858727,0.9841051,0.0006475364,0.00017350618,0.0004028665,0.00063007005,0.000038555234,0.00022353262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976852,0.00046739078,0.00045376524,0.0008490584,0.0001180061,0.00042656995],"domain_scores_gemma":[0.9988056,0.00004787934,0.000117184776,0.0005613648,0.00018387452,0.0002841236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011559556,0.00027142963,0.00038691843,0.00025344844,0.000055541095,0.000018250972,0.00032854002,0.00042547288,0.0000014006406],"category_scores_gemma":[0.0008923529,0.00022944408,0.00017748786,0.0005423819,0.00019230512,0.0000023794655,0.00017102531,0.00013503182,0.0000031304894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022911683,0.00025015153,0.000058921472,0.000015566064,0.00007900179,0.0000010057414,0.000016190077,0.000038539394,0.9709898,0.0041310107,0.0011797686,0.02301089],"study_design_scores_gemma":[0.0009891059,0.00066384155,0.000010318914,0.000016351054,0.000059055237,0.000030086145,0.000060977312,0.0010317946,0.68852365,0.0072232285,0.30100846,0.00038314113],"about_ca_topic_score_codex":0.000034514273,"about_ca_topic_score_gemma":0.0000034362909,"teacher_disagreement_score":0.29982868,"about_ca_system_score_codex":0.000056795052,"about_ca_system_score_gemma":0.0001882883,"threshold_uncertainty_score":0.9356458},"labels":[],"label_agreement":null},{"id":"W2411639870","doi":"10.1007/978-1-61779-228-1_12","title":"Isolating Microsatellite Loci: Looking Back, Looking Ahead","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Microsatellite; Biology; Genetics; Locus (genetics); DNA sequencing; Genome; DNA; Allele; Gene","score_opus":0.039506049611725456,"score_gpt":0.3263857825237048,"score_spread":0.2868797329119794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411639870","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85978734,0.0056601404,0.12520458,0.00012078518,0.0002141877,0.00028496314,0.000038396964,0.00006263818,0.00862695],"genre_scores_gemma":[0.1936241,0.00031236024,0.8047578,0.0009819445,0.000111382,0.000018039007,0.00008673755,0.000004014447,0.000103664446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981387,0.00065225817,0.00030024117,0.00039604236,0.000058079273,0.00045466953],"domain_scores_gemma":[0.9995198,0.00018652118,0.00009689541,0.00009088941,0.00002706345,0.00007879126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006653235,0.00017197424,0.0002510463,0.000027622425,0.000077582874,0.000018885006,0.000278872,0.0001938503,0.0002677795],"category_scores_gemma":[0.00009034274,0.00008083995,0.00010688139,0.00028835557,0.00009316254,0.000027855442,0.000107200925,0.00016696904,0.000032125077],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021206597,0.000029411363,0.020527352,0.0000067571727,0.000011399138,0.000029002988,0.000077924975,0.0000017691062,0.86828065,0.0004096832,0.0000065692066,0.11059825],"study_design_scores_gemma":[0.00030293636,0.0002512905,0.04464309,0.00008534967,0.000031710522,0.000028760276,0.0002428865,0.00023973342,0.90124804,0.027933588,0.024321612,0.0006710297],"about_ca_topic_score_codex":0.00012513112,"about_ca_topic_score_gemma":0.00015366067,"teacher_disagreement_score":0.6795532,"about_ca_system_score_codex":0.00001941756,"about_ca_system_score_gemma":0.000007254729,"threshold_uncertainty_score":0.32965577},"labels":[],"label_agreement":null},{"id":"W2411687771","doi":"10.1007/978-1-60327-565-1_2","title":"Approaches to the Compositional Analysis of DNA","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metal complexes synthesis and properties","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Public Health Agency of Canada; University of Guelph","funders":"","keywords":"DNA; Chromatography; Computational biology; Taxonomy (biology); Variety (cybernetics); Chemistry; Computer science; Biology; Artificial intelligence; Biochemistry; Zoology","score_opus":0.20490966885504328,"score_gpt":0.4139714847711055,"score_spread":0.20906181591606224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411687771","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14761561,0.0008239316,0.8429989,0.0046609747,0.000028625811,0.00017833654,0.0000051383126,0.0000069676885,0.0036815272],"genre_scores_gemma":[0.4422138,0.000003233969,0.5562619,0.0014510223,0.000012013799,0.0000084254625,0.000014251623,0.0000026723944,0.000032669515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860036,0.0008259312,0.00022633743,0.00016521044,0.00006462443,0.00011752482],"domain_scores_gemma":[0.9994893,0.00014834169,0.000041505235,0.0002666565,0.000022941256,0.000031236497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010921111,0.00007492523,0.00038730292,0.00024376945,0.000019302324,0.0000029168073,0.00011668497,0.00005391269,0.000062543455],"category_scores_gemma":[0.00020081541,0.000043342967,0.00015823223,0.000574205,0.00006245983,0.000004540986,0.00002974237,0.00007978919,0.0000021879866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078080506,0.00006062882,0.0010178179,0.0000044397207,0.00025259404,0.0000018511435,0.00010516785,0.00019002553,0.95353293,0.01866933,0.000010267985,0.02607684],"study_design_scores_gemma":[0.00023673812,0.00059046235,0.06706411,0.000017621833,0.0007448794,0.000011764044,0.000060456372,0.0036164352,0.91481596,0.00761358,0.00509988,0.00012811017],"about_ca_topic_score_codex":0.000014798107,"about_ca_topic_score_gemma":0.0000031941604,"teacher_disagreement_score":0.2945982,"about_ca_system_score_codex":0.000010715448,"about_ca_system_score_gemma":0.000013205501,"threshold_uncertainty_score":0.17674749},"labels":[],"label_agreement":null},{"id":"W2411720897","doi":"10.1007/978-1-60761-594-1_8","title":"Synthesis of Antimicrobial Peptides Using the SPOT Technique","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Peptide; Combinatorial chemistry; Antimicrobial peptides; Membrane; Antimicrobial; Cellulose; Cleavage (geology); Nanotechnology; Chemistry; Biochemistry; Materials science; Organic chemistry","score_opus":0.021125776724814953,"score_gpt":0.34342223073341643,"score_spread":0.32229645400860146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411720897","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27443147,0.00071332726,0.72298986,0.0003894412,0.00024005496,0.00035706896,0.00002154689,0.00003509683,0.0008221241],"genre_scores_gemma":[0.6131235,0.000043853222,0.38638327,0.00035247635,0.00001407919,0.000010019215,0.000006143478,0.000011864059,0.00005483447],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997446,0.0014824268,0.00039610494,0.0002909239,0.000014528649,0.00037000052],"domain_scores_gemma":[0.99900705,0.00040662603,0.00018380393,0.00035084947,0.00004223365,0.000009436266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011172993,0.00019978904,0.0004754035,0.00018125857,0.000094946605,0.00000697427,0.00036876576,0.00035799234,0.000050617295],"category_scores_gemma":[0.00033070293,0.00014490612,0.00017327405,0.00022921589,0.0005888499,0.000032388398,0.000096262884,0.0003312375,0.0000048363336],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056675013,0.000073148745,0.00021379448,0.000009524489,0.000043846307,0.000005513506,0.00006641102,0.000038917457,0.98308164,0.0036680428,0.00006283909,0.012679628],"study_design_scores_gemma":[0.00017761183,0.000081911225,0.00017294193,0.00005718185,0.000034875335,0.000114414965,0.00008393169,0.000007696734,0.995591,0.0026465836,0.0008696113,0.00016223284],"about_ca_topic_score_codex":0.00016889567,"about_ca_topic_score_gemma":0.000004593409,"teacher_disagreement_score":0.338692,"about_ca_system_score_codex":0.000026474423,"about_ca_system_score_gemma":0.000046240857,"threshold_uncertainty_score":0.59091},"labels":[],"label_agreement":null},{"id":"W2411735051","doi":"10.1007/978-1-59745-521-3_14","title":"In Vitro Measurement of DNA Base Excision Repair in Isolated Mitochondria","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Base excision repair; Mitochondrial DNA; Biology; DNA ligase; Mitochondrion; DNA glycosylase; DNA repair; DNA damage; DNA; DNA polymerase; AP endonuclease; Molecular biology; Biochemistry; Cell biology; Genetics; Gene","score_opus":0.02446514319897144,"score_gpt":0.34740525507631576,"score_spread":0.32294011187734434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411735051","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24603902,0.001722188,0.7497355,0.00045680092,0.0008354625,0.00057164935,0.000013034355,0.000019367057,0.00060703116],"genre_scores_gemma":[0.22464493,0.0001721961,0.7726566,0.002103068,0.000119515345,0.00006441744,0.00008811777,0.00003258331,0.00011856937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99596643,0.0021318002,0.00072602514,0.00066814956,0.00011216837,0.00039541724],"domain_scores_gemma":[0.99908876,0.000046480745,0.0001420837,0.00056382775,0.000094494746,0.00006435299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019821762,0.00023487702,0.0004720001,0.0004122716,0.000014928897,0.0000028535121,0.00023036968,0.00054482924,0.000038391274],"category_scores_gemma":[0.0011233361,0.0002330224,0.0001679215,0.00045541106,0.00008220077,0.000004000008,0.00008223813,0.0002639832,0.0000035603268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009652726,0.000200547,0.0006954721,0.0000098282335,0.000012034662,0.000060068156,0.000043373813,0.00008482262,0.9940129,0.0001963381,0.00013660692,0.0035827644],"study_design_scores_gemma":[0.0017207344,0.00076975126,0.00084881735,0.000025141542,0.000007752573,0.000023583636,0.000021970747,0.00031846983,0.9887077,0.0021707895,0.005154107,0.00023118634],"about_ca_topic_score_codex":0.000059552523,"about_ca_topic_score_gemma":0.000098981895,"teacher_disagreement_score":0.02292116,"about_ca_system_score_codex":0.00004545683,"about_ca_system_score_gemma":0.000085202104,"threshold_uncertainty_score":0.95023775},"labels":[],"label_agreement":null},{"id":"W2411752502","doi":"10.1007/978-1-59745-407-0_18","title":"On-Chip Detection of Low-Molecular-Weight Recombinant Proteins in Plant Crude Extracts by SELDI-TOF MS","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetically Modified Organisms Research","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Recombinant DNA; Protein chip; Chromatography; Mass spectrometry; Chemistry; Transgene; Standard curve; Molecular biology; Biochemistry; Biology; Gene; Bioinformatics","score_opus":0.022921216424059313,"score_gpt":0.3267047120354896,"score_spread":0.3037834956114303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411752502","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9494481,0.0003593467,0.048339754,0.00074333244,0.000098590666,0.0006055923,0.000016356435,0.000023192586,0.00036570293],"genre_scores_gemma":[0.948128,0.00006728138,0.051355805,0.0003243708,0.000017113274,0.00004583712,0.00003524106,0.000003093282,0.00002326168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963682,0.0018227666,0.0004752326,0.0005736096,0.00019637807,0.0005637682],"domain_scores_gemma":[0.99919575,0.00036592505,0.000111359564,0.00016603078,0.000050345894,0.00011060224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013709217,0.00022166285,0.00038645245,0.000095025396,0.00004274859,0.000016507955,0.00043073602,0.0003901254,0.0000867878],"category_scores_gemma":[0.00066721794,0.00010669726,0.00009730645,0.0006228881,0.00011131379,0.000021623346,0.00008368729,0.00044942598,0.000008257517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009232227,0.0003196184,0.00021611614,0.000006339381,0.0000058480473,0.00004024793,0.000019906145,0.000015368056,0.89234215,0.0010137127,0.000006128433,0.10592222],"study_design_scores_gemma":[0.0003270799,0.0015180815,0.017889915,0.000037504808,0.0000031651266,0.000009921012,0.0000120656005,0.00010327621,0.95769686,0.021867223,0.00033306042,0.0002018696],"about_ca_topic_score_codex":0.00027040744,"about_ca_topic_score_gemma":0.00017946067,"teacher_disagreement_score":0.105720356,"about_ca_system_score_codex":0.00006146093,"about_ca_system_score_gemma":0.00001946455,"threshold_uncertainty_score":0.4350988},"labels":[],"label_agreement":null},{"id":"W241178646","doi":"10.1007/978-1-4939-2428-8_25","title":"Evidence-Based Decision-Making 3: Health Technology Assessment","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Programs for Assessment of Technology in Health Research Institute; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Health technology; Clinical decision making; Computer science; Medicine; Health care; Political science; Family medicine","score_opus":0.5807941364067452,"score_gpt":0.6206787903400323,"score_spread":0.039884653933287106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W241178646","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0077224514,0.013944595,0.92156625,0.054504924,0.00082444074,0.0005728958,0.000021345379,0.00006826565,0.00077485706],"genre_scores_gemma":[0.06389246,0.000095422874,0.9148203,0.020904178,0.00006615821,0.00016804179,0.000007882297,0.000029561697,0.000015987427],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9916665,0.0032108957,0.0035970178,0.00083362416,0.0000719755,0.00061996165],"domain_scores_gemma":[0.9940271,0.003242083,0.0016344126,0.0008232337,0.00008933356,0.00018385633],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.060406018,0.0002164618,0.0012524142,0.0011884362,0.00008526189,0.00003267022,0.00052300823,0.00035893702,0.00011902451],"category_scores_gemma":[0.026517885,0.00026287857,0.00010908471,0.00069178874,0.00015158903,0.00013051857,0.00014679959,0.00037219134,0.00021225658],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045018256,0.00020594473,0.17388192,0.00016423005,0.00006621019,0.000015605669,0.00045846327,0.0029636805,0.00035552148,0.74928546,0.002783319,0.06977461],"study_design_scores_gemma":[0.0016029463,0.0007180719,0.0059643984,0.000735295,0.0000053227122,0.000018036326,0.001004479,0.028784906,0.00018150671,0.9142984,0.04600701,0.00067960325],"about_ca_topic_score_codex":0.00025149874,"about_ca_topic_score_gemma":0.000058914597,"teacher_disagreement_score":0.16791752,"about_ca_system_score_codex":0.0013513583,"about_ca_system_score_gemma":0.0008513426,"threshold_uncertainty_score":0.99998236},"labels":[],"label_agreement":null},{"id":"W2411816964","doi":"10.1007/978-1-62703-589-7_21","title":"Prioritization of Therapeutic Targets of Inflammation Using Proteomics, Bioinformatics, and In Silico Cell–Cell Interactomics","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"In silico; Prioritization; Computational biology; Proteomics; Computer science; Biology; Bioinformatics; Engineering; Biochemistry; Management science","score_opus":0.01763506120015205,"score_gpt":0.34897800260897494,"score_spread":0.33134294140882287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411816964","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37701434,0.00018121823,0.6223494,0.00003474976,0.00006464671,0.00030691535,8.534284e-7,0.0000051365096,0.000042744257],"genre_scores_gemma":[0.20932001,0.000015854132,0.79060566,0.000034019937,0.000004242087,0.0000093446615,0.0000041286426,0.000005681485,0.0000010298729],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9978812,0.0010548517,0.0006339101,0.00019993939,0.00007430846,0.00015578972],"domain_scores_gemma":[0.9988907,0.00040591057,0.0003326935,0.00023352599,0.0001135623,0.000023617831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012724868,0.000115962386,0.00027754813,0.00039484003,0.0000108485665,0.000020448017,0.00028532822,0.00010834585,0.00000298359],"category_scores_gemma":[0.00022690944,0.00011589457,0.000035944773,0.0003839269,0.000085771615,0.00026061997,0.00022122213,0.00012416593,5.891384e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006712621,0.000036960508,0.003256278,0.000100057696,0.000005032913,4.832295e-7,0.00090582075,0.017463213,0.9390011,0.003908349,1.6859742e-7,0.03531583],"study_design_scores_gemma":[0.00020779163,0.00003321401,0.0016822942,0.000017039874,0.000001962458,0.0000015283758,0.000032882086,0.53674,0.42959198,0.03162071,0.0000029896864,0.00006761159],"about_ca_topic_score_codex":0.00010003431,"about_ca_topic_score_gemma":0.0000046531604,"teacher_disagreement_score":0.5192768,"about_ca_system_score_codex":0.000048061986,"about_ca_system_score_gemma":0.000081312086,"threshold_uncertainty_score":0.47260433},"labels":[],"label_agreement":null},{"id":"W2411833990","doi":"10.1007/978-1-61779-882-5_15","title":"Isolation and Biochemical Analysis of Plant Small RNAs","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Isolation (microbiology); Computational biology; Biology; Bioinformatics","score_opus":0.06889604469852965,"score_gpt":0.3865729600285115,"score_spread":0.3176769153299818,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411833990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9732283,0.00177542,0.024505412,0.00012833452,0.000026372154,0.00007384714,0.00013583057,0.000007553007,0.00011892603],"genre_scores_gemma":[0.7501226,0.00031924254,0.24916466,0.0001196501,0.000039173625,0.000016853106,0.00020545558,6.578313e-7,0.00001167715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889666,0.0005412891,0.00015321797,0.00014449526,0.00004231037,0.00022202154],"domain_scores_gemma":[0.9993096,0.0005435502,0.000046857258,0.000034823548,0.000018444245,0.000046707584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009213075,0.00006857327,0.00023477388,0.00005830908,0.000023194112,0.0000033737394,0.00009184932,0.00009552874,0.00002646857],"category_scores_gemma":[0.0003656324,0.0000267577,0.0000547486,0.0005147097,0.00009910811,0.000013604942,0.00011277163,0.00007655443,6.0508086e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013741302,0.00002508325,0.045645483,0.0000020238303,0.00009125441,7.1657513e-7,0.000033159115,9.894651e-7,0.94332844,0.00044245727,0.0000074051086,0.01040927],"study_design_scores_gemma":[0.00009899404,0.00012649928,0.27419692,0.0000058208057,0.0001175781,0.0000037531274,0.00008486903,0.00077233696,0.72101545,0.000979664,0.0024424563,0.0001556756],"about_ca_topic_score_codex":0.00017012811,"about_ca_topic_score_gemma":0.000068469744,"teacher_disagreement_score":0.22855143,"about_ca_system_score_codex":0.00000838708,"about_ca_system_score_gemma":0.0000016432044,"threshold_uncertainty_score":0.10911474},"labels":[],"label_agreement":null},{"id":"W2411841447","doi":"10.1007/978-1-4939-2684-8_21","title":"Structural Characterization of a Hybrid Carrageenan-Like Sulfated Galactan from a Marine Red Alga Furcellaria lumbricalis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Seaweed-derived Bioactive Compounds","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Galactan; Sulfation; Carrageenan; Chemistry; Electrospray ionization; Disaccharide; Red algae; Mass spectrometry; Sugar; Two-dimensional nuclear magnetic resonance spectroscopy; Sulfate; Algae; Polysaccharide; Chromatography; Biochemistry; Botany; Stereochemistry; Organic chemistry; Biology","score_opus":0.03743437508558575,"score_gpt":0.31508146691559197,"score_spread":0.27764709183000624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411841447","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9870462,0.00006595508,0.011310766,0.00044806243,0.00035734946,0.0002563976,0.00009961209,0.000050615006,0.0003650403],"genre_scores_gemma":[0.93226373,0.000013559876,0.06585075,0.000262361,0.00009757727,0.000017926675,0.0014505311,0.000004012935,0.000039558232],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968784,0.0016840465,0.00044108363,0.0005161421,0.00013905855,0.00034125676],"domain_scores_gemma":[0.9990737,0.00021903095,0.00023901374,0.00015952085,0.00017564812,0.00013309617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006039285,0.00023156789,0.00047315657,0.000048262133,0.00003924217,0.000022436203,0.0003905554,0.0001850562,0.00020235317],"category_scores_gemma":[0.00038983114,0.000111822184,0.0001083987,0.000518097,0.00016763582,0.00005003586,0.00028392262,0.00020570114,0.0000027496005],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012021114,0.000031737454,0.023113132,0.0000021816425,0.000033598037,0.000020098229,0.000048025897,0.000001870593,0.948646,0.000045774974,0.000009671848,0.027927661],"study_design_scores_gemma":[0.0006042607,0.00038929604,0.2533755,0.000010836473,0.000028705706,0.000018158247,0.000078978504,0.0010911142,0.7362202,0.0052477214,0.0025947688,0.0003404992],"about_ca_topic_score_codex":0.002365992,"about_ca_topic_score_gemma":0.00012752654,"teacher_disagreement_score":0.23026237,"about_ca_system_score_codex":0.00007578241,"about_ca_system_score_gemma":0.000020427786,"threshold_uncertainty_score":0.45599765},"labels":[],"label_agreement":null},{"id":"W2411894186","doi":"10.1007/978-1-61779-231-1_17","title":"In Vivo Nuclear Magnetic Resonance Metabolite Profiling in Plant Seeds","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"GABA and Rice Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Steacie Institute for Molecular Sciences; National Research Council Canada","funders":"","keywords":"Metabolite profiling; Metabolite; In vivo; Nuclear magnetic resonance; Profiling (computer programming); Chemistry; Computational biology; Biology; Physics; Biochemistry; Computer science; Biotechnology","score_opus":0.05081941007551236,"score_gpt":0.34937072757278276,"score_spread":0.2985513174972704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411894186","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9922802,0.0038650064,0.00023623291,0.00025430482,0.00010922678,0.00029400448,0.00001649876,0.000017878672,0.0029266863],"genre_scores_gemma":[0.38847074,0.0012114699,0.60875845,0.00095070427,0.00010390802,0.00012530136,0.000020049074,0.0000073518277,0.00035203403],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9973163,0.0014275933,0.00029009726,0.00038365702,0.00007702191,0.00050534186],"domain_scores_gemma":[0.9996245,0.00018328354,0.00003563565,0.00008229509,0.000018584324,0.000055715816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001631857,0.0001298497,0.00027559832,0.00008801904,0.000028080862,0.000009002056,0.0003392197,0.00020250332,0.00035323354],"category_scores_gemma":[0.00018736033,0.00005468421,0.000053419426,0.0007247913,0.000104738436,0.000036244415,0.00014500515,0.00031025038,0.000011067323],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046412875,0.000074047704,0.020025603,0.0000045040383,0.0000013924695,0.00010029587,0.00016145171,5.9455454e-7,0.9383428,0.0046804035,0.0000030872393,0.036559418],"study_design_scores_gemma":[0.0007587226,0.00077400485,0.5276788,0.000052534913,0.000006748456,0.000041226547,0.00064784137,0.0007175755,0.41583717,0.024489194,0.028450476,0.0005456858],"about_ca_topic_score_codex":0.0013098504,"about_ca_topic_score_gemma":0.0004699598,"teacher_disagreement_score":0.60852224,"about_ca_system_score_codex":0.000024916091,"about_ca_system_score_gemma":0.000009390637,"threshold_uncertainty_score":0.38676596},"labels":[],"label_agreement":null},{"id":"W2411934966","doi":"10.1007/978-1-61779-142-0_3","title":"Self-Assembly of Metal-DNA Triangles and DNA Nanotubes with Synthetic Junctions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Template; DNA; DNA origami; Nanotechnology; Molecule; Materials science; Metal; Nanostructure; Crystallography; Chemistry; Biochemistry","score_opus":0.018484071920048525,"score_gpt":0.32902387574396985,"score_spread":0.3105398038239213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411934966","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5554715,0.0008554045,0.4423288,0.00003991504,0.00005215716,0.00019165564,0.00000830477,0.000037769747,0.001014497],"genre_scores_gemma":[0.41753528,0.00017873004,0.582141,0.000059306833,0.000011250806,0.000016013113,0.000012136082,0.000015529555,0.000030777035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998286,0.00063046324,0.00030941668,0.00047691874,0.000055179153,0.00024202748],"domain_scores_gemma":[0.9992659,0.00003874422,0.00014250679,0.0004131538,0.000088272514,0.000051402898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006409934,0.00021264695,0.0003769129,0.00017081425,0.00004129672,0.000004701927,0.00015208998,0.00025652177,0.000002049007],"category_scores_gemma":[0.000182117,0.00015969049,0.00010564566,0.00024148221,0.00028881204,0.000003253798,0.00010498751,0.0000970549,3.0649463e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098708355,0.00010881986,0.0006063802,0.000016679143,0.00015912385,0.000007366593,0.000050627274,3.7269623e-7,0.9917901,0.0008328765,0.0000031200605,0.006325821],"study_design_scores_gemma":[0.00034563508,0.000692361,0.00023781977,0.00001641467,0.00012241198,0.000048765225,0.000088761626,0.000021025216,0.9953942,0.0012389212,0.0015843221,0.00020938857],"about_ca_topic_score_codex":0.000025188678,"about_ca_topic_score_gemma":0.00004165001,"teacher_disagreement_score":0.13981219,"about_ca_system_score_codex":0.00000960259,"about_ca_system_score_gemma":0.000037026868,"threshold_uncertainty_score":0.6511989},"labels":[],"label_agreement":null},{"id":"W2411946259","doi":"10.1007/978-1-4939-2938-2_15","title":"Mechanobioreactors for Cartilage Tissue Engineering","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; Queen's University; Kingston General Hospital; St. Michael's Hospital","funders":"","keywords":"Cartilage; Tissue engineering; Extracellular matrix; Materials science; Biomedical engineering; Matrix (chemical analysis); Compression (physics); Engineering; Composite material; Anatomy; Medicine; Cell biology; Biology","score_opus":0.03570404419154641,"score_gpt":0.3934809992696666,"score_spread":0.35777695507812024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411946259","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07715804,0.00078442396,0.9201973,0.00015785656,0.0005033226,0.0006112474,0.000006907437,0.000060589642,0.00052029506],"genre_scores_gemma":[0.041846417,0.0000047798308,0.95749336,0.00017800942,0.000058942773,0.00015220197,0.000053345248,0.000028617633,0.00018434924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916124,0.000116899275,0.00017200244,0.00023653245,0.000044028173,0.00026927772],"domain_scores_gemma":[0.9995256,0.000078566314,0.000029487046,0.0001969192,0.000045976045,0.00012346086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059896486,0.00013251902,0.00030449327,0.00014468552,0.00000935887,0.0000039636034,0.000054763896,0.00017247656,0.000010139031],"category_scores_gemma":[0.00047721853,0.000117935684,0.00006521859,0.00011804548,0.000018733748,0.000014244411,0.000030106798,0.00008326035,0.0000057909742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050099352,0.00003284691,0.00013840564,0.0000127614185,0.000009520531,0.000057084773,0.00007602452,0.0000037770537,0.96677786,0.0070087225,0.00001263414,0.025820265],"study_design_scores_gemma":[0.0020341456,0.0016115309,0.0000071769678,0.000020255342,0.000041070114,0.00004121741,0.00003877574,0.00009962376,0.9712363,0.003926411,0.020833062,0.00011043302],"about_ca_topic_score_codex":0.0000073799883,"about_ca_topic_score_gemma":0.0000033700667,"teacher_disagreement_score":0.03729602,"about_ca_system_score_codex":0.000060917726,"about_ca_system_score_gemma":0.00004366761,"threshold_uncertainty_score":0.48092777},"labels":[],"label_agreement":null},{"id":"W2411968740","doi":"10.1007/978-1-4939-2013-6_8","title":"A High-Throughput Cellular Assay to Quantify the p53-Degradation Activity of E6 from Different Human Papillomavirus Types","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cervical Cancer and HPV Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Cancer Research Institute","keywords":"Luciferase; Transfection; Proteasome; Ubiquitin; Degradation (telecommunications); Chemistry; Protein degradation; Cell culture; Cell biology; Cancer research; Molecular biology; Biology; Biochemistry; Genetics; Gene; Computer science","score_opus":0.06478861665012293,"score_gpt":0.46063156937544747,"score_spread":0.39584295272532455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411968740","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46464288,0.00021723512,0.53332657,0.0008903741,0.00010790365,0.00024381577,0.000007795011,0.000011180323,0.00055223267],"genre_scores_gemma":[0.89703745,0.000022349876,0.10223085,0.0004424165,0.00009814367,0.000043801403,0.00004222821,0.000017942815,0.00006481787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965585,0.0023812247,0.0002619135,0.0003620562,0.00017471606,0.0002615839],"domain_scores_gemma":[0.9985701,0.00064965175,0.00007181848,0.00054684136,0.00007838496,0.00008321671],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015573291,0.0001460248,0.0004944324,0.00011216313,0.000048431844,0.000008250526,0.00020888158,0.00017716305,0.00042608843],"category_scores_gemma":[0.0007658572,0.00009277588,0.000104799925,0.0002122032,0.00014604481,0.000011301381,0.00016235837,0.00034155755,0.000009670633],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015864457,0.000100937075,0.0039149546,0.00002399329,0.000047163478,0.000003659472,0.00006581529,0.000005502549,0.8587108,0.006559627,0.000015229879,0.13039362],"study_design_scores_gemma":[0.0007607673,0.00052035344,0.09845685,0.000013647273,0.000049588874,6.915467e-7,0.000014342817,0.0002875661,0.88411605,0.013546668,0.002129245,0.00010422626],"about_ca_topic_score_codex":0.0024840764,"about_ca_topic_score_gemma":0.00023831867,"teacher_disagreement_score":0.43239456,"about_ca_system_score_codex":0.000063279906,"about_ca_system_score_gemma":0.000027904269,"threshold_uncertainty_score":0.46653697},"labels":[],"label_agreement":null},{"id":"W2411974661","doi":"10.1007/978-1-61779-276-2_20","title":"Predicting Node Characteristics from Molecular Networks","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"","keywords":"Clustering coefficient; Degree distribution; Node (physics); Computer science; Relation (database); Cluster analysis; Biological network; Average path length; Path (computing); Function (biology); Shortest path problem; Complex network; Data mining; Theoretical computer science; Topology (electrical circuits); Artificial intelligence; Mathematics; Computational biology; Biology; Graph; Computer network; Genetics; Engineering","score_opus":0.018412161399471775,"score_gpt":0.31010534104026666,"score_spread":0.2916931796407949,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2411974661","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14793438,0.0011662551,0.8471578,0.000025900095,0.0005145103,0.00020583383,0.000027551623,0.000023563116,0.0029442324],"genre_scores_gemma":[0.34390366,0.00013303035,0.6540685,0.0012446156,0.00018842665,0.000044069733,0.00033237174,0.000051601604,0.000033718632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975833,0.00056678004,0.00062804105,0.00056599296,0.000069149035,0.0005867323],"domain_scores_gemma":[0.99880534,0.00004555512,0.00022982137,0.0007271933,0.000062308914,0.00012979987],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00087373133,0.00032381667,0.0003981107,0.000092532166,0.00005568145,0.000019595984,0.00049342215,0.0006328539,0.000064128464],"category_scores_gemma":[0.00019979946,0.00032584008,0.00016322828,0.00016503465,0.00016947858,0.000003918963,0.00038346864,0.00036764657,0.000008156399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013483332,0.00009528833,0.0361474,0.000012119859,0.00018374152,0.00005231989,0.00019240553,0.0002684621,0.91857266,0.0027445657,0.0000560284,0.041540183],"study_design_scores_gemma":[0.0039303727,0.0013207404,0.025212487,0.0001499326,0.0002681236,0.00010437046,0.00031691816,0.06891621,0.82315904,0.056716684,0.016891798,0.003013305],"about_ca_topic_score_codex":0.00012917128,"about_ca_topic_score_gemma":0.000018727267,"teacher_disagreement_score":0.19596927,"about_ca_system_score_codex":0.000021456899,"about_ca_system_score_gemma":0.00004748,"threshold_uncertainty_score":0.99991935},"labels":[],"label_agreement":null},{"id":"W2412015180","doi":"10.1007/978-1-4939-1142-4_18","title":"Protein Correlation Profiling-SILAC to Study Protein-Protein Interactions","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Interactome; Stable isotope labeling by amino acids in cell culture; Computational biology; Protein–protein interaction; Chemistry; Proteomics; Mass spectrometry; Quantitative proteomics; Biology; Biochemistry; Chromatography","score_opus":0.021873349783379743,"score_gpt":0.41472366169708447,"score_spread":0.39285031191370473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412015180","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29897213,0.000012569614,0.6968983,0.00020503637,0.000021708425,0.0018981339,0.000005312052,0.0001337156,0.0018530986],"genre_scores_gemma":[0.28790736,2.5842618e-7,0.70605814,0.000062446634,0.00003797493,0.0054274825,0.000020446361,0.000032481505,0.0004533881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979436,0.000532348,0.00048459612,0.00063012604,0.00008334756,0.00032598546],"domain_scores_gemma":[0.998848,0.00007527638,0.00018181656,0.0007216134,0.000087430104,0.00008587144],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009343458,0.00023474332,0.00030110104,0.00015257657,0.00010772471,0.00002007392,0.00034605153,0.00019045494,0.00011078252],"category_scores_gemma":[0.0007761829,0.00023613509,0.000073349096,0.00034202854,0.00005492472,0.000039714098,0.00020264054,0.0005203382,0.000024369281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034856337,0.00020640121,0.00053888495,0.000017118775,0.000013639476,0.0000020255884,0.00006100529,0.00010134875,0.9491699,0.023081915,0.000001121376,0.026771786],"study_design_scores_gemma":[0.00031321598,0.00016997686,0.000020712669,0.000043454434,0.000008858367,0.0000030380177,0.00005825871,0.0012589695,0.9222495,0.07238162,0.00324551,0.00024688407],"about_ca_topic_score_codex":0.000051940784,"about_ca_topic_score_gemma":0.000010608962,"teacher_disagreement_score":0.049299702,"about_ca_system_score_codex":0.00010012074,"about_ca_system_score_gemma":0.000026773987,"threshold_uncertainty_score":0.962931},"labels":[],"label_agreement":null},{"id":"W2412062278","doi":"10.1007/978-1-62703-339-8_3","title":"The Role of the Vessel Wall","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Thrombosis and Atherosclerosis Research Institute","funders":"","keywords":"Angiogenesis; Immunogenicity; Lumen (anatomy); Basement membrane; Cell biology; Function (biology); Blood vessel; Chemistry; Biophysics; Biology; Medicine; Immunology; Internal medicine; Immune system","score_opus":0.010779349380865763,"score_gpt":0.3395385611217268,"score_spread":0.32875921174086103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412062278","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71617246,0.041876912,0.2286366,0.002221481,0.0008573378,0.0010013349,0.000011290889,0.00001462973,0.009207945],"genre_scores_gemma":[0.83501065,0.00096773694,0.16122718,0.0015652992,0.00013929799,0.00028057682,0.000013612851,0.000045953562,0.000749725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985593,0.0006746129,0.00023439665,0.00023547927,0.000051486768,0.0002447076],"domain_scores_gemma":[0.9991884,0.00006218354,0.00009918146,0.00055370614,0.000069332316,0.00002714838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056418695,0.000115816714,0.00013701829,0.000020274774,0.00006748483,0.000008976183,0.00049492397,0.00017775048,0.000023095443],"category_scores_gemma":[0.00020537912,0.00006431405,0.00015110354,0.00012414795,0.00025808133,0.0000011150061,0.00022591079,0.00008906894,0.0000041963863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008045636,0.000014477383,0.007874536,0.000002169411,0.000028987371,1.2321986e-7,0.000013170447,0.000014992748,0.95139414,0.0030405773,0.00018064816,0.037428148],"study_design_scores_gemma":[0.00012218823,0.000058894362,0.0035759574,0.000003986147,0.0000069613798,0.0000031333554,0.000050520295,0.00007997351,0.83998793,0.010018937,0.1460052,0.000086304404],"about_ca_topic_score_codex":0.00013033142,"about_ca_topic_score_gemma":0.000018438082,"teacher_disagreement_score":0.14582455,"about_ca_system_score_codex":0.000009222069,"about_ca_system_score_gemma":0.000047300702,"threshold_uncertainty_score":0.2622651},"labels":[],"label_agreement":null},{"id":"W2412063897","doi":"10.1007/978-1-4614-3704-8_10","title":"Estimation of Intrinsically Disordered Protein Shape and Time-Averaged Apparent Hydration in Native Conditions by a Combination of Hydrodynamic Methods","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; Institut national de la recherche scientifique","keywords":"Hydrodynamic radius; Viscosity; RADIUS; Macromolecule; Intrinsic viscosity; Analytical Ultracentrifugation; Intrinsically disordered proteins; Chemistry; Chemical physics; Ultracentrifuge; Biological system; Materials science; Dynamic light scattering; Physics; Chromatography; Nanotechnology; Thermodynamics; Computer science; Polymer; Biology","score_opus":0.006465177363825781,"score_gpt":0.3483783704737862,"score_spread":0.34191319310996043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412063897","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49009183,0.00043284497,0.50896007,0.0000280073,0.000022577522,0.00036567127,0.000018958779,0.000003059208,0.00007694664],"genre_scores_gemma":[0.644175,0.000018839046,0.35533458,0.000022172251,0.0000047400463,0.00007489818,0.00035083806,0.000009655958,0.000009265143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974133,0.0016189746,0.0004450694,0.00026228387,0.00006284479,0.00019755289],"domain_scores_gemma":[0.99937105,0.000091120964,0.00024217836,0.00019781663,0.00005950648,0.000038352202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012241148,0.00015522419,0.00031290145,0.00017391879,0.000021744823,0.0000036590586,0.000108816865,0.00026961745,0.00000749514],"category_scores_gemma":[0.0007904364,0.00015512033,0.000048771777,0.00022581006,0.00018778394,0.000010257968,0.00010033156,0.00013609289,2.1226877e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006873425,0.00013638735,0.0006189214,0.000033776552,0.000027655455,2.2994044e-7,0.00011934461,0.00033539953,0.962212,0.0031764603,0.0000017356748,0.03326931],"study_design_scores_gemma":[0.000910179,0.00035319224,0.0018539751,0.000025002268,0.00001714296,0.000003959138,0.00002779762,0.071818605,0.9053259,0.019454326,0.00003791049,0.00017202387],"about_ca_topic_score_codex":0.00003180052,"about_ca_topic_score_gemma":0.0000105668105,"teacher_disagreement_score":0.15408318,"about_ca_system_score_codex":0.000027091042,"about_ca_system_score_gemma":0.00003478028,"threshold_uncertainty_score":0.63256234},"labels":[],"label_agreement":null},{"id":"W2412067728","doi":"10.1007/978-1-62703-655-9_10","title":"Microinjection Manipulations in the Elucidation of Xenopus Brain Development","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"","keywords":"Microinjection; Morpholino; Xenopus; Embryo; Biology; Cell biology; Neurogenesis; Computational biology; Messenger RNA; Gene knockdown; Genetics; Gene","score_opus":0.02218684948973978,"score_gpt":0.3653818735383115,"score_spread":0.3431950240485717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412067728","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5622061,0.00033064932,0.4364862,0.00033202904,0.00008144118,0.00025502016,5.122011e-7,0.0000023123473,0.000305764],"genre_scores_gemma":[0.6795784,0.0000325661,0.31983137,0.00023545414,0.000042130756,0.000078301804,0.00006847154,0.000010374403,0.00012287802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986096,0.00060025585,0.00030451387,0.00028553288,0.000046114965,0.00015400375],"domain_scores_gemma":[0.99955857,0.00002588167,0.00008849431,0.0002570371,0.000056125868,0.000013885987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092670746,0.00009584021,0.000112863054,0.00010922013,0.000030204057,0.000007049772,0.00014616107,0.00015095911,0.000012975176],"category_scores_gemma":[0.00019378621,0.00007533627,0.000038946757,0.00020109244,0.00006450537,0.0000022118381,0.00005599625,0.00008918125,0.0000035927271],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009013867,0.00004846679,0.0041900254,0.0000060298594,0.000009238154,3.859196e-7,0.000115020586,0.00021061218,0.979586,0.00043178443,0.00005480246,0.015338621],"study_design_scores_gemma":[0.00022191813,0.00016587741,0.044134073,0.000005599136,0.000003910848,0.000014435067,0.00014101858,0.0001193769,0.9426552,0.0015894963,0.01083505,0.00011406572],"about_ca_topic_score_codex":0.000103946484,"about_ca_topic_score_gemma":0.00005583238,"teacher_disagreement_score":0.117372364,"about_ca_system_score_codex":0.000014467336,"about_ca_system_score_gemma":0.000035961577,"threshold_uncertainty_score":0.30721238},"labels":[],"label_agreement":null},{"id":"W2412092877","doi":"10.1007/7651_2016_322","title":"An Effective and Reliable Xeno-free Cryopreservation Protocol for Single Human Pluripotent Stem Cells","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Cryopreservation; Induced pluripotent stem cell; Dimethyl sulfoxide; Cell biology; Biology; Chemistry; Embryonic stem cell; Embryo; Biochemistry; Gene","score_opus":0.03686391991409297,"score_gpt":0.40991668008310617,"score_spread":0.3730527601690132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412092877","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06901303,0.000070741895,0.8770741,0.0001958449,0.0000848275,0.05309597,0.00003642642,0.000026880729,0.00040212853],"genre_scores_gemma":[0.02715818,0.0000173891,0.74118817,0.00031397238,0.00021939629,0.2297622,0.00006881856,0.00013811684,0.0011337849],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968116,0.0012967718,0.0003705949,0.0008693975,0.000111415065,0.00054021337],"domain_scores_gemma":[0.9985518,0.00014160175,0.00013328555,0.00088195,0.00016357664,0.00012782123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018359451,0.00025786462,0.00030605745,0.00014921217,0.000099126075,0.000027684477,0.0005091589,0.00039311856,0.000010819908],"category_scores_gemma":[0.00024972716,0.00019587245,0.00009134841,0.0001259245,0.00021773229,0.000010821614,0.0003776416,0.00011291825,0.000001967839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030794487,0.0001605802,0.00084979355,0.00008277181,0.000034920937,0.000005245009,0.000014917181,0.00002262251,0.98004276,0.0004441335,0.00016344282,0.01787085],"study_design_scores_gemma":[0.0031623344,0.0024017014,0.0002727796,0.000040959956,0.000009029363,0.0000075161984,0.000011609918,0.00010337289,0.965013,0.0050897202,0.02362036,0.00026761254],"about_ca_topic_score_codex":0.00003195663,"about_ca_topic_score_gemma":0.000022332217,"teacher_disagreement_score":0.17666623,"about_ca_system_score_codex":0.00006396168,"about_ca_system_score_gemma":0.00003849043,"threshold_uncertainty_score":0.7987446},"labels":[],"label_agreement":null},{"id":"W2412186354","doi":"10.1007/978-1-59745-471-1_19","title":"Creation and Use of a Cre Recombinase Transgenic Database","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":106,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Recombinase; Database; Computer science; Transgene; Computational biology; Biology; Genetics; Gene; Recombination","score_opus":0.05139945305885478,"score_gpt":0.4883868827947208,"score_spread":0.436987429735866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412186354","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000109898945,0.6015964,0.39787805,0.0000041803196,0.00006121946,0.00027255533,0.000043021213,0.0000045545626,0.000030113433],"genre_scores_gemma":[0.000008439933,0.69190824,0.30746016,0.000024554545,0.000023820892,0.000033929915,0.00047083126,0.000028822022,0.000041216193],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976158,0.00093449553,0.0005685582,0.000580896,0.0000446544,0.00025558812],"domain_scores_gemma":[0.9990658,0.000100763864,0.00015935802,0.000572016,0.00003397932,0.00006804792],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00061297807,0.00034446345,0.00097087264,0.00022245091,0.00001615023,0.000009765853,0.00018990213,0.0005889617,0.0000072151147],"category_scores_gemma":[0.00038370586,0.0003224199,0.00025336986,0.00019762984,0.00009885468,0.000002157529,0.00010330271,0.00022721305,5.134891e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011167531,0.000041452684,0.00000836487,0.0013755063,0.000081784776,0.000007155276,0.00000996759,0.00001193328,0.11462578,0.00015356057,0.000016249194,0.8836571],"study_design_scores_gemma":[0.00037751993,0.0003873399,0.000009456307,0.0011249778,0.00034127742,0.00006369421,0.000004799999,0.000030088722,0.04084677,0.0002031279,0.95613384,0.0004770828],"about_ca_topic_score_codex":0.000021390564,"about_ca_topic_score_gemma":0.0000102508475,"teacher_disagreement_score":0.95611763,"about_ca_system_score_codex":0.000013157501,"about_ca_system_score_gemma":0.000078926656,"threshold_uncertainty_score":0.9999228},"labels":[],"label_agreement":null},{"id":"W2412249589","doi":"10.1007/978-1-4939-1441-8_27","title":"Liquid Chromatography and Mass Spectrometry for the Analysis of N-β-Methylamino-l-alanine with 6-Aminoquinolyl-N-Hydroxysuccinimidyl Carbamate","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Radioactive element chemistry and processing","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Chemistry; Mass spectrometry; Liquid chromatography–mass spectrometry; Carbamate; Neurotoxin; Tandem mass spectrometry; Reagent; Chromatography; Cyanobacteria; Neurotoxicity; Derivatization; Biochemistry; Organic chemistry; Toxicity; Biology; Bacteria","score_opus":0.010595329686504357,"score_gpt":0.3237482492877748,"score_spread":0.31315291960127045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412249589","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40900046,0.0013964289,0.58840656,0.00005767146,0.000018443387,0.000069276604,0.0000181208,0.000016395976,0.0010166834],"genre_scores_gemma":[0.5517305,0.00007166401,0.44796476,0.00005541451,0.00003447452,0.000056350716,0.000041003874,0.000020376727,0.000025432464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984975,0.00024307093,0.0003723786,0.00046212494,0.00008974676,0.00033520313],"domain_scores_gemma":[0.99805367,0.0011264944,0.00026848124,0.00044435248,0.000057790305,0.00004920501],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011989101,0.00023612146,0.00061516283,0.0002721218,0.00007158988,0.000016189359,0.0002849037,0.00018665397,0.000050275514],"category_scores_gemma":[0.00024949788,0.00016565708,0.00017284218,0.0008851288,0.00030168582,0.000025570927,0.000051581785,0.00020779722,7.724539e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001789471,0.000059767503,0.009284769,0.00016850128,0.0012962149,0.00000223275,0.00006990778,0.000075032156,0.9833897,0.00049947907,7.454765e-7,0.0049747354],"study_design_scores_gemma":[0.0012183691,0.00017861962,0.000459223,0.000024814472,0.0009208172,0.000005809716,0.000109073175,0.0054702843,0.9896609,0.0010318266,0.0007069188,0.00021331452],"about_ca_topic_score_codex":0.000021491987,"about_ca_topic_score_gemma":0.000004514691,"teacher_disagreement_score":0.14273009,"about_ca_system_score_codex":0.00002065189,"about_ca_system_score_gemma":0.000018754768,"threshold_uncertainty_score":0.67552996},"labels":[],"label_agreement":null},{"id":"W2412258207","doi":"10.1007/978-1-4939-1441-8_6","title":"Quantification of DNA Repair Capacity Towards Oxidatively Damaged DNA in Subcellular and Cellular Systems by a Nonradioactive Cleavage Assay","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Deutsche Forschungsgemeinschaft","keywords":"Oligonucleotide; DNA; DNA damage; DNA repair; Base excision repair; DNA glycosylase; Endonuclease; Peripheral blood mononuclear cell; Biochemistry; Biology; Molecular biology; Cleavage (geology); Chemistry; Computational biology; In vitro","score_opus":0.022026633523274854,"score_gpt":0.31407734553294037,"score_spread":0.29205071200966554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412258207","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48890904,0.0006420481,0.50969523,0.000024841243,0.00011440511,0.00032401877,0.00002232383,0.000016505917,0.0002515932],"genre_scores_gemma":[0.79250115,0.000051056963,0.20700952,0.00006862872,0.000026545033,0.000079216625,0.00015598621,0.00003986727,0.000068056295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9931776,0.0046882657,0.00065844494,0.0009233504,0.00013355017,0.0004187734],"domain_scores_gemma":[0.9985905,0.00012841706,0.0003206482,0.0007643566,0.00010021405,0.00009584216],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00546439,0.00032488335,0.00061969954,0.00021914262,0.00003898144,0.000013346724,0.00032263328,0.0005899536,0.000003803409],"category_scores_gemma":[0.0013495405,0.0003337749,0.00013981045,0.00028553547,0.00031660357,0.000008044799,0.000184792,0.0002751834,0.0000013815578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008105476,0.00013242899,0.001411155,0.00007355714,0.00006932855,0.0000068831982,0.00012518361,0.000027918904,0.9927517,0.003761048,0.000037469,0.0015222784],"study_design_scores_gemma":[0.00072273606,0.00049844646,0.00053564826,0.000029678895,0.000027410526,0.00001078237,0.00013552427,0.0022327756,0.9922256,0.001242716,0.002009902,0.00032878798],"about_ca_topic_score_codex":0.0003219036,"about_ca_topic_score_gemma":0.00002785379,"teacher_disagreement_score":0.3035921,"about_ca_system_score_codex":0.000055608987,"about_ca_system_score_gemma":0.00005448744,"threshold_uncertainty_score":0.9999114},"labels":[],"label_agreement":null},{"id":"W2412259762","doi":"10.1007/978-1-60327-367-1_6","title":"Copy Number Variations in the Human Genome and Strategies for Analysis","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Dental and Craniofacial Research; Canadian Institutes of Health Research","keywords":"Copy-number variation; Genetics; Biology; Human genome; Genome; Computational biology; Genotype; Whole genome sequencing; Structural variation; Sequence (biology); Population; Evolutionary biology; Gene; Medicine","score_opus":0.018928412992343387,"score_gpt":0.38232894630253783,"score_spread":0.36340053331019445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412259762","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5157854,0.0000647024,0.48298246,0.00012127138,0.000043462835,0.0001560397,0.00002405752,0.0000026823043,0.0008199234],"genre_scores_gemma":[0.731181,0.000010471829,0.2682512,0.00020185803,0.00004213979,0.000116466246,0.00014922275,0.0000068514823,0.000040773957],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99886054,0.00040498783,0.00023043285,0.00027610135,0.000028094895,0.00019984668],"domain_scores_gemma":[0.99951625,0.00006894931,0.00005998219,0.00029532335,0.000038137037,0.000021359496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010209448,0.000113145565,0.0001744806,0.000098825556,0.00008022537,0.000035972953,0.00020257615,0.00019087948,0.00003262922],"category_scores_gemma":[0.00008653017,0.000091095084,0.00008371695,0.00022133389,0.00010616994,0.0000030961874,0.00006110024,0.00013300078,5.945062e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000062358827,0.000033001917,0.03593611,0.000005105563,0.00008391643,0.0000010511586,0.00024896156,0.00007787068,0.8506291,0.1127791,0.0000035918563,0.00019593004],"study_design_scores_gemma":[0.0035173672,0.0007574944,0.34425062,0.0000066391954,0.00078360963,0.00010674213,0.0044477126,0.0009518849,0.20360117,0.3893605,0.05075796,0.0014583181],"about_ca_topic_score_codex":0.00014117849,"about_ca_topic_score_gemma":0.00073341816,"teacher_disagreement_score":0.64702797,"about_ca_system_score_codex":0.0000052453465,"about_ca_system_score_gemma":0.000042458545,"threshold_uncertainty_score":0.37147495},"labels":[],"label_agreement":null},{"id":"W2412270156","doi":"10.1007/978-1-60327-015-1_20","title":"In Cellulo DNA Analysis (LMPCR Footprinting)","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin; Footprinting; DNA footprinting; DNA; Biology; Genetics; Computational biology; Gene; Transcription factor; DNA-binding protein; Base sequence","score_opus":0.009061516773337774,"score_gpt":0.3430171516675531,"score_spread":0.3339556348942153,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412270156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56209844,0.00043010004,0.43558022,0.00020109133,0.00008289206,0.000106589956,0.0000025608697,0.000006154461,0.0014919199],"genre_scores_gemma":[0.56338197,0.00008127425,0.43549502,0.00078871154,0.000039440987,0.000012943704,0.000056970985,0.000014749991,0.00012890555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979227,0.0005841547,0.00043289637,0.0005848079,0.00005242674,0.00042302182],"domain_scores_gemma":[0.99921256,0.0000273424,0.00011143257,0.0005532899,0.000034804663,0.000060541017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010189582,0.00021445146,0.00038387807,0.0003495375,0.000025760031,0.000014543545,0.00035135893,0.00034555275,0.00001914115],"category_scores_gemma":[0.00019372546,0.00022369916,0.00021156916,0.0006343404,0.00006605754,0.0000016066531,0.00013389374,0.00018182633,0.0000026674788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019555302,0.00007738155,0.008676335,0.000003709122,0.00007605975,0.000020511574,0.000030777675,0.0009672625,0.9808929,0.0019770353,0.000010618119,0.0072478326],"study_design_scores_gemma":[0.001055416,0.00046967118,0.027599126,0.000007634155,0.00011107647,0.000016920127,0.000058670637,0.00389161,0.93669707,0.021803537,0.0076433416,0.0006459091],"about_ca_topic_score_codex":0.000038943235,"about_ca_topic_score_gemma":0.00008090349,"teacher_disagreement_score":0.044195835,"about_ca_system_score_codex":0.000032172946,"about_ca_system_score_gemma":0.000040605646,"threshold_uncertainty_score":0.9122187},"labels":[],"label_agreement":null},{"id":"W2412361894","doi":"10.1007/978-1-59745-398-1_22","title":"Toward High-Throughput and Reliable Peptide Identification via MS/MS Spectra","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Proteomics; Tandem mass spectrometry; Identification (biology); Mass spectrometry; Computational biology; Peptide; Tandem; Throughput; Computer science; Software; Chemistry; Chromatography; Biology; Engineering; Biochemistry","score_opus":0.026581197520733575,"score_gpt":0.36949171561712013,"score_spread":0.34291051809638656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412361894","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06821246,0.0003816998,0.9285191,0.00028484387,0.000030822714,0.00014657828,0.000008105937,0.00009408923,0.0023222987],"genre_scores_gemma":[0.055470202,0.00055306306,0.94321215,0.00011920956,0.000040623378,0.00018871951,0.00004615831,0.000023979706,0.00034591064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988583,0.00008451133,0.00031795813,0.0004569815,0.000046039935,0.00023626474],"domain_scores_gemma":[0.99927783,0.00006907332,0.00011901202,0.00045414653,0.00003489052,0.000045019417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032813384,0.00014546444,0.00022279784,0.00005868591,0.00008014004,0.000007921768,0.00019743676,0.00021685261,0.00009029693],"category_scores_gemma":[0.000095516334,0.00015152595,0.000045277837,0.00015634701,0.0001850868,0.000034460147,0.0001013402,0.00025205564,0.000007126485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007602942,0.000028134522,0.00066261203,0.00001704241,0.000008202679,0.000010328772,0.000049671118,0.000020569498,0.9824757,0.013037134,0.00003603652,0.0036469535],"study_design_scores_gemma":[0.00015831232,0.00001664123,0.00016893583,0.000007084558,0.0000070010296,0.00005696766,0.0000079539095,0.00023579778,0.83988756,0.1523287,0.006976572,0.00014848188],"about_ca_topic_score_codex":0.00019262667,"about_ca_topic_score_gemma":0.0000034147693,"teacher_disagreement_score":0.14258815,"about_ca_system_score_codex":0.0000568612,"about_ca_system_score_gemma":0.000019012115,"threshold_uncertainty_score":0.6179049},"labels":[],"label_agreement":null},{"id":"W2412419671","doi":"10.1007/978-1-4939-2428-8_2","title":"Research Ethics for Clinical Researchers","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ethics in Clinical Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Confidentiality; Engineering ethics; Research ethics; Variety (cybernetics); Informed consent; Scientific misconduct; Information ethics; Political science; Misconduct; Ethical issues; Corporate governance; Medicine; Law; Engineering; Business; Alternative medicine; Computer science","score_opus":0.9715056710357676,"score_gpt":0.8534595982883267,"score_spread":0.11804607274744083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412419671","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0094144,0.0022754013,0.9241254,0.045381054,0.0006536074,0.0016644065,0.00000782614,0.000053316853,0.016424643],"genre_scores_gemma":[0.0036493908,0.0010987415,0.98955864,0.0027718723,0.0002941143,0.0002487181,0.000022209588,0.000055339253,0.0023010056],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.96899194,0.02609086,0.0012071977,0.0011156399,0.0012896713,0.001304691],"domain_scores_gemma":[0.7989437,0.19273867,0.00011922208,0.0018835124,0.005111254,0.001203664],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.32911858,0.00015413576,0.00067454303,0.00056013925,0.00009405873,0.000023859282,0.00070108566,0.0026609045,0.000040093528],"category_scores_gemma":[0.61997736,0.00013092444,0.000249368,0.0010101914,0.0025966682,0.00002169426,0.00070670195,0.013679949,0.000055928183],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0069775423,0.0014514152,0.05760187,0.00071898213,0.0003231951,0.0005365254,0.0012821069,0.000014378573,0.06513574,0.73042125,0.0064220363,0.12911497],"study_design_scores_gemma":[0.003819867,0.0040949928,0.0008554576,0.00013470014,0.000018671719,0.000017790218,0.0008544043,0.00058285036,0.015751056,0.86956364,0.104122914,0.00018365851],"about_ca_topic_score_codex":0.00013990684,"about_ca_topic_score_gemma":0.00008865234,"teacher_disagreement_score":0.29085875,"about_ca_system_score_codex":0.00026170618,"about_ca_system_score_gemma":0.0037886805,"threshold_uncertainty_score":0.99863386},"labels":[],"label_agreement":null},{"id":"W2412433251","doi":"10.1007/978-1-60327-106-6_5","title":"The Electroosmotic Flow (EOF)","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Scaling; Microfluidics; Flow (mathematics); Mechanics; Boundary (topology); Materials science; Nanotechnology; Physics; Mathematics; Geometry","score_opus":0.019858450437664224,"score_gpt":0.3696214092097101,"score_spread":0.3497629587720459,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412433251","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[1.2056836e-7,0.6273269,0.37145078,0.000013822486,0.00009612613,0.00030605478,0.000003316982,0.00006191633,0.000740984],"genre_scores_gemma":[4.317924e-8,0.9274137,0.0720452,0.000048699094,0.000057184036,0.00024855213,0.000058820802,0.00006170593,0.00006607971],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974368,0.0010525798,0.0005563461,0.00034687153,0.000048289894,0.0005590755],"domain_scores_gemma":[0.9988277,0.00035777895,0.00006845332,0.0006801218,0.000016357528,0.00004959548],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008619225,0.00038082467,0.0009830854,0.00015535088,0.000075220734,0.000022882385,0.0006128293,0.0004966328,0.000018189321],"category_scores_gemma":[0.00008671852,0.00026641204,0.000321506,0.00054636586,0.00007709351,0.000006631875,0.0000428302,0.0006929438,0.000037587004],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[4.612099e-7,0.0000058655874,3.8814736e-8,0.00027640566,0.00007240346,0.0000050941426,0.0000032786654,0.0000036274787,0.00495005,0.004597282,0.0019523475,0.98813313],"study_design_scores_gemma":[0.00003889172,0.00003220747,1.3520867e-7,0.00015454298,0.00013283189,0.000039693874,8.1102695e-7,0.00008643245,0.0009774561,0.0065104864,0.9917693,0.00025719643],"about_ca_topic_score_codex":0.0000017568084,"about_ca_topic_score_gemma":0.0000012903334,"teacher_disagreement_score":0.98981696,"about_ca_system_score_codex":0.00014854925,"about_ca_system_score_gemma":0.000076401746,"threshold_uncertainty_score":0.9999788},"labels":[],"label_agreement":null},{"id":"W2412582391","doi":"10.1007/978-1-62703-589-7_5","title":"Methods and Applications of Serological Proteome Analysis","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"U.S. Public Health Service","keywords":"Proteome; Serology; Biology; Immunology; Identification (biology); Disease; Repertoire; Antigen; Computational biology; Virology; Antibody; Medicine; Bioinformatics; Pathology","score_opus":0.020944361135463507,"score_gpt":0.4241386792483252,"score_spread":0.4031943181128617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412582391","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12989467,0.0008949307,0.86797744,0.00008811952,0.00002055643,0.00050337275,0.000007175195,0.0000048811935,0.0006088199],"genre_scores_gemma":[0.10031606,0.0001425432,0.89879394,0.00012156108,0.00003436592,0.00045312935,0.00004397962,0.000011175051,0.00008322666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99746543,0.0014371172,0.00032246,0.0004493276,0.000049452483,0.00027622265],"domain_scores_gemma":[0.9992084,0.00009318073,0.00008561189,0.0004139302,0.00011581888,0.00008306859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015439462,0.00013707367,0.000365003,0.0002008556,0.00002909653,0.000011365563,0.0002272124,0.00031799212,0.000114445465],"category_scores_gemma":[0.00037054488,0.00011359369,0.00012122442,0.0005335037,0.00028791974,0.0000021113794,0.0002392525,0.00013482981,0.000002706889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020233745,0.000036602796,0.004372735,0.000012136121,0.00012996315,4.1464256e-7,0.000008868467,0.00001302185,0.9072658,0.0008829114,0.0000034741652,0.087253846],"study_design_scores_gemma":[0.0003990887,0.00037142317,0.012661051,0.0000021983012,0.00007558529,0.0000056538547,0.000023261648,0.00042850556,0.9631959,0.012722671,0.009898152,0.00021649631],"about_ca_topic_score_codex":0.000105758576,"about_ca_topic_score_gemma":0.000010060454,"teacher_disagreement_score":0.08703735,"about_ca_system_score_codex":0.0000065782037,"about_ca_system_score_gemma":0.000026328775,"threshold_uncertainty_score":0.46322164},"labels":[],"label_agreement":null},{"id":"W2412584429","doi":"10.1007/978-1-60327-545-3_2","title":"High-Throughput Screening of Model Bacteria","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"High-throughput screening; Bacteria; Throughput; Computational biology; Biochemical engineering; Small molecule; Biology; Chemistry; Nanotechnology; Biochemistry; Computer science; Engineering; Genetics; Materials science","score_opus":0.022697907494314162,"score_gpt":0.3585709843907485,"score_spread":0.33587307689643436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412584429","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37567648,0.00036635133,0.62329036,0.00025186734,0.00012152465,0.00011554351,0.000013458024,0.000010928517,0.00015345289],"genre_scores_gemma":[0.3307325,0.0001256208,0.6685687,0.0003979781,0.000046934263,0.000006946745,0.00006677783,0.00001450935,0.000040072384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822575,0.0003683056,0.00044665695,0.00052548706,0.000052536037,0.00038129115],"domain_scores_gemma":[0.9991387,0.00001495929,0.00015406098,0.0005747195,0.00006579095,0.000051769635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006116502,0.00022427524,0.00039197263,0.00013994072,0.000025517083,0.0000074194563,0.00038789466,0.0006464426,0.000014143348],"category_scores_gemma":[0.00017915493,0.00021656971,0.00012007444,0.00019405952,0.00017712243,0.000001937704,0.00018560715,0.000169606,0.0000010781995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000867981,0.00005920919,0.00013880541,0.00000485206,0.000025086943,0.0000029368816,0.000009340336,0.0005428654,0.95104,0.005071811,0.000020387035,0.042997867],"study_design_scores_gemma":[0.0005696443,0.00066607783,0.0009149062,0.000009521992,0.000013029195,0.000010931457,0.000007019942,0.00070206285,0.98258144,0.012469659,0.001822542,0.00023315716],"about_ca_topic_score_codex":0.000021071399,"about_ca_topic_score_gemma":0.0000056345943,"teacher_disagreement_score":0.045278277,"about_ca_system_score_codex":0.00000897849,"about_ca_system_score_gemma":0.000048283844,"threshold_uncertainty_score":0.8831457},"labels":[],"label_agreement":null},{"id":"W2412589450","doi":"10.1007/978-1-4939-3073-9_9","title":"Monitoring Protein Kinase Expression and Phosphorylation in Cell Lysates with Antibody Microarrays","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Kinexus Bioinformatics Corporation (Canada)","funders":"","keywords":"Kinome; Phosphorylation; Protein microarray; Antibody microarray; DNA microarray; Kinase; Protein phosphorylation; Microarray; Biology; Antibody; Protein Array Analysis; Protein kinase A; Computational biology; Cell biology; Molecular biology; Biochemistry; Gene expression; Immunology; Gene","score_opus":0.01845673956614964,"score_gpt":0.377134231106271,"score_spread":0.35867749154012135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412589450","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54064876,0.00083206187,0.45814964,0.000036431764,0.000014802128,0.0002163145,0.0000013434009,0.00001113601,0.0000895153],"genre_scores_gemma":[0.4249567,0.000051875995,0.57486105,0.000020658734,0.000015850062,0.00004198239,0.00002189467,0.00001256225,0.00001740745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894613,0.00026141974,0.0001745406,0.0003824675,0.00003790166,0.00019753896],"domain_scores_gemma":[0.99955094,0.000012871195,0.00007246484,0.00026331036,0.000045490775,0.000054933607],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043190425,0.0001411519,0.00014879463,0.00007489168,0.000025403499,0.000008898725,0.00009638265,0.0001885057,3.9637428e-7],"category_scores_gemma":[0.000076758624,0.000122060264,0.000018903736,0.00014422869,0.00009580353,0.000003355616,0.00010661862,0.00012148376,3.2221212e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006022077,0.000040288374,0.0074206195,0.0000072530797,0.0000021055102,0.000007591786,0.000032259406,0.000036694226,0.9880025,0.000068650974,0.0000021794033,0.00431968],"study_design_scores_gemma":[0.0004983443,0.00021239395,0.00040881967,0.000041969743,0.0000028934894,0.000008597817,0.00007196055,0.000056560744,0.9953574,0.002054659,0.0011252771,0.00016114795],"about_ca_topic_score_codex":0.000033807413,"about_ca_topic_score_gemma":0.0000056596373,"teacher_disagreement_score":0.11671143,"about_ca_system_score_codex":0.000019602861,"about_ca_system_score_gemma":0.000030291207,"threshold_uncertainty_score":0.4977473},"labels":[],"label_agreement":null},{"id":"W2412604033","doi":"10.1007/978-1-4939-2569-8_16","title":"In Vitro and In Vivo Characterization of the Rab11-GAP Activity of Drosophila Evi5","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Rab; GTPase; Cell biology; GTPase-activating protein; Effector; In vivo; Biology; In vitro; Cell polarity; Drosophila (subgenus); Cell; Signal transduction; Biochemistry; Genetics; G protein; Gene","score_opus":0.02388190049161659,"score_gpt":0.3287235901410967,"score_spread":0.3048416896494801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412604033","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8822188,0.00023031932,0.11707356,0.00011013795,0.00009378629,0.00017616285,0.000010713696,0.0000011198863,0.00008541267],"genre_scores_gemma":[0.9874946,0.000078423,0.012219086,0.00006839388,0.000015180654,0.00001286354,0.00008382747,0.000009266354,0.000018355577],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863607,0.0006879068,0.00026216402,0.00023042859,0.00005002769,0.00013342011],"domain_scores_gemma":[0.9995787,0.000015996633,0.00011588521,0.00023042288,0.000034013156,0.000024970157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089971774,0.00010085434,0.00023798029,0.00009592466,0.000006228922,0.0000016279994,0.00012212165,0.00022458922,0.0000028052816],"category_scores_gemma":[0.00013895622,0.00008562192,0.000050449475,0.00019440513,0.00013715003,0.0000034931684,0.00006895495,0.00010456267,5.8932805e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024117035,0.000056285822,0.017808285,0.00001938903,0.0000061682385,0.0000024236674,0.000083289015,0.000014380469,0.98067176,0.00009955445,2.0797528e-7,0.0009971027],"study_design_scores_gemma":[0.0006243547,0.00007484873,0.015211092,0.000012268625,0.0000052325436,0.000003326192,0.000010476806,0.00016583374,0.9823844,0.00090961216,0.0005191765,0.000079406236],"about_ca_topic_score_codex":0.00007516299,"about_ca_topic_score_gemma":0.00005703258,"teacher_disagreement_score":0.10527581,"about_ca_system_score_codex":0.0000128818165,"about_ca_system_score_gemma":0.000047554124,"threshold_uncertainty_score":0.34915605},"labels":[],"label_agreement":null},{"id":"W2412612509","doi":"10.1007/978-1-59745-365-3_8","title":"Neurospora crassa as a Model Organism for Mitochondrial Biogenesis","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Neurospora crassa; Crassa; Organism; Biology; Model organism; Gene; Biogenesis; Mitochondrion; Genome; Genetics; Organelle; Cell biology","score_opus":0.02417440397685678,"score_gpt":0.3781280065927039,"score_spread":0.35395360261584713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412612509","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07008189,0.0003399794,0.92625344,0.00018456245,0.0016275004,0.0005780365,0.000035464942,0.000029999936,0.00086913863],"genre_scores_gemma":[0.008791533,0.0000556847,0.9864047,0.0028669708,0.0004906979,0.000104742656,0.00023978764,0.00007369183,0.000972201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99739474,0.0005024144,0.0005238785,0.0008703451,0.00007761268,0.00063098816],"domain_scores_gemma":[0.99886656,0.00012837371,0.00014171196,0.0005885471,0.00012804425,0.00014678636],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012389257,0.00030852106,0.0003793715,0.00022753613,0.000082462124,0.000014300482,0.00034883083,0.0007355425,0.00004353548],"category_scores_gemma":[0.001315241,0.0003101505,0.0002419736,0.0002518092,0.00016143666,0.0000028245413,0.0001534384,0.00017706573,0.000013878548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00056868116,0.00007182425,0.00041487132,0.00000920101,0.000031065083,0.000019482452,0.00002995498,0.00017871984,0.98846996,0.005181378,0.00033674933,0.004688135],"study_design_scores_gemma":[0.0014076898,0.0006461269,0.000047899855,0.0000032787932,0.000027681805,0.00006368569,0.000026530888,0.00047230223,0.9453754,0.009749812,0.041833136,0.00034647054],"about_ca_topic_score_codex":0.000029241206,"about_ca_topic_score_gemma":0.000052634263,"teacher_disagreement_score":0.061290354,"about_ca_system_score_codex":0.00002487489,"about_ca_system_score_gemma":0.00013253198,"threshold_uncertainty_score":0.99993503},"labels":[],"label_agreement":null},{"id":"W2412750864","doi":"10.1007/978-1-4939-3191-0_17","title":"Antibody Array as a Tool for Screening of Natural Agents in Cancer Chemoprevention","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre","funders":"","keywords":"Computational biology; Cancer; Drug discovery; Drug; Antibody; Natural (archaeology); Biology; Cancer research; Chemistry; Bioinformatics; Pharmacology; Immunology; Genetics","score_opus":0.051972617395024075,"score_gpt":0.4940758456088439,"score_spread":0.4421032282138198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412750864","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19802506,0.00058087247,0.80078554,0.00010121575,0.00006816524,0.00033878355,0.000009878939,0.0000076525685,0.00008279743],"genre_scores_gemma":[0.25240514,0.00005771559,0.74698126,0.00017070863,0.000029516357,0.00009841247,0.00018489605,0.000013799678,0.000058578684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99896353,0.00020015307,0.00027182006,0.00032034298,0.000041054987,0.00020310147],"domain_scores_gemma":[0.99949825,0.000021848728,0.00011681595,0.00024782695,0.00008588993,0.000029346567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066688965,0.00011825125,0.00020029783,0.00008159955,0.000014567176,0.0000032723538,0.00015043696,0.0001817979,0.0000017003563],"category_scores_gemma":[0.00036166701,0.00011626735,0.00008245717,0.00016523327,0.00007459916,0.0000024522783,0.00007176216,0.00009101964,2.0835033e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073311305,0.000043742068,0.0021314148,0.0000101140995,0.000013381915,8.258383e-7,0.00001584804,0.00008346976,0.9792395,0.0005412097,0.00001785404,0.017829306],"study_design_scores_gemma":[0.000625874,0.00016621768,0.0004911219,0.000027555594,0.000008015916,0.000004966962,0.000022517634,0.0003120515,0.98138624,0.008793644,0.008018143,0.00014367832],"about_ca_topic_score_codex":0.000069211026,"about_ca_topic_score_gemma":0.000020234549,"teacher_disagreement_score":0.054380063,"about_ca_system_score_codex":0.000021981143,"about_ca_system_score_gemma":0.000049082166,"threshold_uncertainty_score":0.4741245},"labels":[],"label_agreement":null},{"id":"W2412793414","doi":"10.1007/978-1-59745-559-6_15","title":"Construction and Analysis of Alphaherpesviruses Expressing Green Fluorescent Protein","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biology; Virus; Pseudorabies; Genetics; Transfection; Recombinant DNA; Homologous recombination; Gene; Strain (injury); Virology; Computational biology","score_opus":0.024855683493359277,"score_gpt":0.4017599331429342,"score_spread":0.3769042496495749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412793414","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5837865,0.00047744898,0.41500878,0.000096764496,0.00002276777,0.00019752492,0.0000043513023,0.000014333627,0.0003915741],"genre_scores_gemma":[0.27173355,0.000025230353,0.7280767,0.000117566866,0.000007262107,0.000012096628,0.000011066728,0.000004775305,0.000011766275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894893,0.0003945569,0.00025185331,0.00022317798,0.000045059154,0.00013644797],"domain_scores_gemma":[0.99960667,0.0000385697,0.000079489735,0.00019216836,0.000037298058,0.000045805646],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032544692,0.0001012879,0.0003922573,0.00043990326,0.000024628995,0.000003769809,0.000028269586,0.000122864,0.00003342275],"category_scores_gemma":[0.00010400195,0.00008401581,0.00008990956,0.00054327707,0.00012600287,0.000016840031,0.00001760593,0.00009637709,4.2835615e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036396897,0.00009092151,0.024521722,0.0000071967656,0.00028355475,0.000014612741,0.000036399066,0.0000044602534,0.5105644,0.0010011212,2.8103346e-7,0.46343893],"study_design_scores_gemma":[0.0013400763,0.00047265724,0.04998432,0.0000687892,0.0010678272,0.000032272936,0.000037126276,0.00073006225,0.9390634,0.0048941127,0.0021608716,0.00014853448],"about_ca_topic_score_codex":0.00019156197,"about_ca_topic_score_gemma":0.000008309419,"teacher_disagreement_score":0.4632904,"about_ca_system_score_codex":0.00003062548,"about_ca_system_score_gemma":0.000021678045,"threshold_uncertainty_score":0.3426065},"labels":[],"label_agreement":null},{"id":"W2412814069","doi":"10.1007/978-1-62703-038-0_19","title":"Density Gradient Separation of Sperm for Artificial Insemination","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Achieve Life Sciences (Canada); BC Hydro (Canada)","funders":"","keywords":"Sperm; Artificial insemination; Semen; Insemination; Differential centrifugation; Robustness (evolution); Density gradient; Sperm washing; Andrology; Biology; Medicine; Molecular biology; Genetics; Physics","score_opus":0.05293581217539728,"score_gpt":0.4446153310761547,"score_spread":0.3916795189007574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412814069","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4215771,0.00012253967,0.57761794,0.000058965004,0.00025068448,0.00020820636,0.0000010795645,0.0000073091132,0.00015614723],"genre_scores_gemma":[0.5655794,0.0000034917582,0.43417275,0.000086562366,0.00007208518,0.00002225092,0.000045331442,0.000005624456,0.000012472425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992403,0.00022644148,0.00020951324,0.00012562651,0.0000443443,0.00015380603],"domain_scores_gemma":[0.9995538,0.0001311473,0.000068957044,0.00012769041,0.00008041331,0.000037992286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010079695,0.000068346235,0.00018992339,0.00012527786,0.00001610558,0.0000013050495,0.000022376003,0.00012537253,0.00001446945],"category_scores_gemma":[0.0010515216,0.00006109795,0.00006828528,0.00013564239,0.000047129877,0.00001960587,0.000012545912,0.00006221349,0.000001921012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009285613,0.00013209949,0.029163033,0.00002415905,0.00001350238,0.0000010969629,0.00012897301,0.0000046195605,0.9286827,0.015070388,0.000011515943,0.0266751],"study_design_scores_gemma":[0.0004132882,0.0003051247,0.0360588,0.000012142564,0.00006992091,0.0000264338,0.000032911565,0.00094840094,0.9547222,0.0064998167,0.0008433778,0.00006757406],"about_ca_topic_score_codex":0.000015249021,"about_ca_topic_score_gemma":0.000003891814,"teacher_disagreement_score":0.14400233,"about_ca_system_score_codex":0.000044385903,"about_ca_system_score_gemma":0.00001910848,"threshold_uncertainty_score":0.2491502},"labels":[],"label_agreement":null},{"id":"W2412839319","doi":"10.1007/978-1-59745-170-3_16","title":"Methods for Analysis of Incorporation and Annealing Methods for Analysis of tRNALys in HIV-1","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Transfer RNA; Reverse transcriptase; Primer binding site; Primer (cosmetics); Biology; Complementary DNA; RNA; Computational biology; Genetics; Chemistry; Gene","score_opus":0.05483265289121103,"score_gpt":0.49523776497282185,"score_spread":0.4404051120816108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412839319","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.043155015,0.0057301293,0.9501128,0.00015649416,0.000046892583,0.00057089055,0.00017487085,0.000008373199,0.000044514112],"genre_scores_gemma":[0.051540017,0.0001238466,0.947046,0.000062566694,0.00000355946,0.00013561487,0.0010448793,0.000009331806,0.00003422016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9920713,0.00608734,0.0008882071,0.00052796066,0.000022350485,0.00040285836],"domain_scores_gemma":[0.9959868,0.0030378085,0.00038282806,0.0003857544,0.00017342373,0.000033364875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007892585,0.0002111286,0.0015544622,0.0029344577,0.000047682322,0.000005225085,0.00020886851,0.00040563522,0.000031142426],"category_scores_gemma":[0.0018829383,0.00018339817,0.0005327571,0.002760674,0.00021844023,0.000030552063,0.000055343364,0.00016949353,3.141652e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003435693,0.00014167193,0.009876678,0.000018291868,0.005328216,0.000001030441,0.00027275295,0.0008880689,0.7211827,0.0025289364,0.0000023115492,0.25941578],"study_design_scores_gemma":[0.0032323163,0.0013879754,0.028218016,0.00001642224,0.008461475,0.0000026695402,0.0002214377,0.028771525,0.90831876,0.019841678,0.001221651,0.00030607314],"about_ca_topic_score_codex":0.00015793217,"about_ca_topic_score_gemma":0.00010145636,"teacher_disagreement_score":0.2591097,"about_ca_system_score_codex":0.000055495126,"about_ca_system_score_gemma":0.000057313075,"threshold_uncertainty_score":0.74787605},"labels":[],"label_agreement":null},{"id":"W2412842996","doi":"10.1007/978-1-60761-376-3_13","title":"Strategies for Imaging Microtubules in Plant Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Microtubule; Immunolabeling; Fixation (population genetics); Biology; Cell biology; Biophysics; Transmission electron microscopy; Nanotechnology; Materials science; Biochemistry","score_opus":0.012692369680280166,"score_gpt":0.3559445705328482,"score_spread":0.3432522008525681,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412842996","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07985987,0.0009905272,0.91786814,0.0001881819,0.00014621878,0.0003175142,0.000027569125,0.0000101525275,0.00059180777],"genre_scores_gemma":[0.33804542,0.0001521546,0.66025174,0.001289887,0.00004655333,0.00008178147,0.00008400133,0.00002009239,0.000028363373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862206,0.00022513494,0.00026826214,0.00045068198,0.000032170243,0.0004017009],"domain_scores_gemma":[0.99957275,0.000036009802,0.00006491993,0.00025403354,0.000030053276,0.00004223118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007039744,0.00018168493,0.00023903797,0.00011796856,0.00002497414,0.000018074037,0.00025463192,0.00017960843,0.0000045412953],"category_scores_gemma":[0.00009298635,0.00017413132,0.00008400556,0.000100898826,0.000053623105,0.0000030075103,0.000055234286,0.0001021929,7.651321e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007130992,0.000055470493,0.000037817572,0.000012840192,0.000006248044,0.000011331198,0.000032963624,0.000045393626,0.98326004,0.006042058,0.000018682735,0.010405831],"study_design_scores_gemma":[0.00053313887,0.00022456404,0.000019392695,0.000015527132,0.0000055445125,0.000018443085,0.00014821684,0.0002760523,0.93252313,0.05698819,0.00904793,0.00019984489],"about_ca_topic_score_codex":0.000021019892,"about_ca_topic_score_gemma":0.000025764486,"teacher_disagreement_score":0.25818554,"about_ca_system_score_codex":0.000014486496,"about_ca_system_score_gemma":0.00008933273,"threshold_uncertainty_score":0.7100869},"labels":[],"label_agreement":null},{"id":"W2412857846","doi":"10.1007/978-1-60761-454-8_11","title":"The Application of NMR Spectroscopy to Functional Glycomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Glycomics; Glycan; Computational biology; Glycobiology; Identification (biology); Biology; Biochemistry; Chemistry; Glycoprotein","score_opus":0.017929431967585438,"score_gpt":0.40511286094667415,"score_spread":0.3871834289790887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412857846","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06425592,0.00038022548,0.93272567,0.0010783104,0.00006142516,0.00033397521,0.0000036992185,0.0000056596864,0.0011551132],"genre_scores_gemma":[0.32477573,0.00008700521,0.67374855,0.0009402675,0.00008868211,0.000080546284,0.00006334398,0.000013869242,0.00020198162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986896,0.00041974828,0.00025592625,0.00029882242,0.0000866432,0.00024928837],"domain_scores_gemma":[0.99930835,0.000049291353,0.00006343125,0.00042868068,0.00009352779,0.000056694324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009788708,0.00010488958,0.00013456475,0.00008686397,0.000058894115,0.000009442564,0.0002588713,0.0001475955,0.000008297659],"category_scores_gemma":[0.00044355265,0.000083241895,0.00007035392,0.0002546292,0.00008800179,0.0000011669136,0.000078560166,0.00012083123,0.000006920415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016638606,0.000032510037,0.0004700115,0.000001716328,0.000009476399,5.028219e-7,0.000006779595,0.00024499782,0.9436846,0.011393909,0.00009313186,0.04389602],"study_design_scores_gemma":[0.00028716619,0.00042690913,0.0027290175,0.0000019515103,0.000002527699,0.000004685785,0.000012104443,0.00039000527,0.9359294,0.008960207,0.05116193,0.000094076626],"about_ca_topic_score_codex":0.000016147105,"about_ca_topic_score_gemma":0.000022421518,"teacher_disagreement_score":0.2605198,"about_ca_system_score_codex":0.00001975375,"about_ca_system_score_gemma":0.000055932614,"threshold_uncertainty_score":0.3394506},"labels":[],"label_agreement":null},{"id":"W2412890603","doi":"10.1007/978-1-4939-3079-1_17","title":"Profiling of Yeast Lipids by Shotgun Lipidomics","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Lipidomics; Lipidome; Yeast; Saccharomyces cerevisiae; Computational biology; Biology; Biochemistry","score_opus":0.02624187182885702,"score_gpt":0.37279325796235024,"score_spread":0.34655138613349323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412890603","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24853276,0.0063890214,0.7412507,0.00011665496,0.00074275624,0.00024126985,0.000044976394,0.000010906972,0.0026709847],"genre_scores_gemma":[0.09885699,0.00045466813,0.8998496,0.00029148863,0.00016109298,0.000044183736,0.00012887693,0.000036451096,0.00017666642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981198,0.0005985701,0.00040976465,0.00044982013,0.00007862,0.0003434492],"domain_scores_gemma":[0.9991916,0.000029466051,0.0001472751,0.00042204553,0.00011550592,0.00009412564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014654922,0.00020545669,0.00042945598,0.00012665105,0.000020466321,0.000006393914,0.00029649472,0.00026851342,0.0000067625724],"category_scores_gemma":[0.00091400836,0.00019259984,0.000113832524,0.00023999464,0.00018825475,0.0000019320487,0.00028444204,0.00014753403,0.000002020096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007594406,0.00006774325,0.0042011,0.000011677377,0.00006961729,0.0000013298808,0.000029003799,0.000025673085,0.98910123,0.0028353024,0.0005514281,0.0030299623],"study_design_scores_gemma":[0.0007746553,0.00036542164,0.00006450356,0.000004628216,0.000018484167,0.000007020112,0.00010208429,0.00007769088,0.9630918,0.0023879905,0.032896094,0.00020963843],"about_ca_topic_score_codex":0.000025864058,"about_ca_topic_score_gemma":0.000007113249,"teacher_disagreement_score":0.1585989,"about_ca_system_score_codex":0.000020320702,"about_ca_system_score_gemma":0.00008317572,"threshold_uncertainty_score":0.7853993},"labels":[],"label_agreement":null},{"id":"W2412916977","doi":"10.1007/978-1-62703-080-9_12","title":"Cell-Specific Markers for the Identification of Retinal Cells by Immunofluorescence Microscopy","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Immunofluorescence; Retina; Retinal; Biology; Confocal microscopy; Antibody; Cell biology; Fluorescence microscope; Cell; Cell type; Confocal; Pathology; Fluorescence; Immunology; Biochemistry; Neuroscience; Medicine","score_opus":0.010666143160166695,"score_gpt":0.34326822353238245,"score_spread":0.3326020803722158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412916977","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09516154,0.019053828,0.8845734,0.00009941537,0.00047508863,0.00040654375,0.000019350173,0.0000039154684,0.00020694223],"genre_scores_gemma":[0.302064,0.0025518797,0.6941723,0.00022799935,0.00006177249,0.00018621203,0.00021268672,0.00003767415,0.00048542535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985323,0.00039957144,0.0004090043,0.0002743402,0.000055656084,0.0003291315],"domain_scores_gemma":[0.99926007,0.00010473685,0.00018886266,0.00035113835,0.00006104248,0.000034160756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018239581,0.00014577992,0.00015786092,0.0000473618,0.000054978387,0.0000093821045,0.0003364973,0.00017879464,0.00001286648],"category_scores_gemma":[0.00014004187,0.000117952906,0.00010576214,0.0001258319,0.00020667487,0.0000030084007,0.000085951695,0.0000855184,0.0000024955223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017358192,0.000054939563,0.0031029554,0.00001902355,0.00001959872,9.128492e-8,0.000045118682,0.000004717227,0.98874503,0.00016001158,0.0043759155,0.0032990149],"study_design_scores_gemma":[0.00031168186,0.00009417905,0.0010041293,0.0000042377706,0.000011272102,0.0000013046914,0.000097498785,0.000019048324,0.93417734,0.0001776423,0.06396816,0.0001335055],"about_ca_topic_score_codex":0.000010105525,"about_ca_topic_score_gemma":3.1473976e-7,"teacher_disagreement_score":0.20690247,"about_ca_system_score_codex":0.000012593018,"about_ca_system_score_gemma":0.000028457102,"threshold_uncertainty_score":0.48099798},"labels":[],"label_agreement":null},{"id":"W2412937939","doi":"10.1007/978-1-60327-475-3_10","title":"In Vivo Analysis of Ribonucleoprotein Complexes Using Nucleotide Analog Interference Mapping","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Science Foundation; Damon Runyon Cancer Research Foundation; Canadian Institutes of Health Research; Natural Sciences and Engineering Research Council of Canada; Medical Research Council; Alberta Heritage Foundation for Medical Research; Fondation pour la Recherche Médicale; Bundesministerium für Bildung und Forschung; Beckman Research Institute, City of Hope; U.S. Department of Defense; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung; National Institutes of Health","keywords":"Spliceosome; Ribonucleoprotein; Computational biology; RNA; Cell biology; Xenopus; Biology; In vitro; Nucleotide; RNA interference; Chemistry; Population; Biochemistry; In vivo; Gene; Biophysics; Genetics; RNA splicing","score_opus":0.04715170037562486,"score_gpt":0.3638614291140505,"score_spread":0.3167097287384256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412937939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5073685,0.00036762987,0.49187565,0.000019716257,0.00004721875,0.00013092943,0.000011038832,0.0000037722577,0.0001755011],"genre_scores_gemma":[0.5179759,0.00007218344,0.48172116,0.00014402308,0.000015863323,0.000017471062,0.000012666684,0.000015709757,0.000025014524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970794,0.0013337649,0.0005956173,0.00055136054,0.00007654004,0.0003633248],"domain_scores_gemma":[0.99909514,0.00006929246,0.00021260089,0.0005096177,0.000060593127,0.000052766143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011112209,0.00022450954,0.0006402684,0.00071122294,0.00004069743,0.000005017344,0.000375698,0.00028641755,0.00010235658],"category_scores_gemma":[0.0003746821,0.00022815034,0.00022912129,0.0009881234,0.00023410749,0.0000046213045,0.00021290965,0.00013716475,8.8195435e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005195838,0.00005621065,0.011776725,0.000012997947,0.00021216675,0.000031701285,0.00010193311,0.0006330466,0.9852951,0.00063807436,0.0000034138955,0.0011866655],"study_design_scores_gemma":[0.0002848016,0.00013911379,0.0019016338,0.000024819074,0.00005603438,0.000015378646,0.00005860723,0.0017036537,0.9934449,0.0016428273,0.00048629064,0.00024191776],"about_ca_topic_score_codex":0.00048728194,"about_ca_topic_score_gemma":0.00013031925,"teacher_disagreement_score":0.010607371,"about_ca_system_score_codex":0.000027659271,"about_ca_system_score_gemma":0.00005290916,"threshold_uncertainty_score":0.9303701},"labels":[],"label_agreement":null},{"id":"W2412964378","doi":"10.1007/978-1-61779-968-6_33","title":"Application of Single-Domain Antibodies in Tumor Histochemistry","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; National Research Council Canada; University of Ottawa; Institute for Biological Sciences; Ottawa Hospital","funders":"","keywords":"Immunohistochemistry; Immunostaining; Antibody; Avidity; Protein subunit; Pathology; Biology; Molecular biology; Chemistry; Medicine; Immunology; Biochemistry; Gene","score_opus":0.03595533965213693,"score_gpt":0.43130079876521654,"score_spread":0.3953454591130796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412964378","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7393969,0.0031629342,0.25258338,0.0003621535,0.00005395966,0.00022877859,0.000004730015,0.000008837332,0.0041982885],"genre_scores_gemma":[0.45685688,0.000023760767,0.5427442,0.00017333789,0.00004349893,0.000032282336,0.000024717638,0.000009850543,0.000091470145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987363,0.0003626502,0.00030941862,0.000184883,0.00008468503,0.0003220505],"domain_scores_gemma":[0.9994472,0.0001657968,0.000068798996,0.00021078029,0.000037253045,0.00007013766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010202011,0.000105727275,0.00034263113,0.00016749355,0.000011126167,0.0000011263329,0.00009896077,0.00010944219,0.0000319414],"category_scores_gemma":[0.00030035185,0.000090135734,0.00006841184,0.00023430985,0.00021366212,0.000014051547,0.00007972698,0.00019990058,0.000004599154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010018158,0.00018162414,0.18939933,0.000094405186,0.000011063614,0.000012807223,0.00008386091,9.036482e-7,0.7983514,0.0024337352,0.000006944803,0.009323722],"study_design_scores_gemma":[0.00051991636,0.00013160691,0.030011717,0.00004137932,0.000009009603,0.000067232264,0.00007196808,0.000088057146,0.9577756,0.0038278745,0.0073424806,0.00011315803],"about_ca_topic_score_codex":0.00013795723,"about_ca_topic_score_gemma":0.0000045927795,"teacher_disagreement_score":0.2901608,"about_ca_system_score_codex":0.000063999636,"about_ca_system_score_gemma":0.000030842344,"threshold_uncertainty_score":0.36756286},"labels":[],"label_agreement":null},{"id":"W2412984518","doi":"10.1007/978-1-61779-117-8_20","title":"Endocytic Sorting of CFTR Variants Monitored by Single-Cell Fluorescence Ratiometric Image Analysis (FRIA) in Living Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Endocytic cycle; Internalization; Cell biology; Endosome; Endocytosis; Chemistry; Clathrin; Mutant; Golgi apparatus; Vesicle; Lysosome; Cell; Biology; Biochemistry; Membrane; Endoplasmic reticulum; Gene; Intracellular","score_opus":0.022631522639708846,"score_gpt":0.3073453728165269,"score_spread":0.28471385017681805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2412984518","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40432888,0.00071056746,0.594337,0.0000020698315,0.00008485693,0.00013556324,0.000008808208,0.000005644981,0.00038659666],"genre_scores_gemma":[0.6380875,0.00007315448,0.36151442,0.000018009583,0.000015121316,0.000015008077,0.00023185363,0.000019474302,0.00002546662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99720085,0.00095624756,0.0007109061,0.0006093375,0.000100530706,0.00042214038],"domain_scores_gemma":[0.99902856,0.0000927019,0.00027599884,0.00045726015,0.000076248914,0.00006925578],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013607419,0.00023708116,0.00049044366,0.0007470248,0.000026577149,0.000010950727,0.0003310791,0.00034036554,0.00004558248],"category_scores_gemma":[0.00035069435,0.0002533785,0.00021977992,0.0015644709,0.00014409405,0.0000068668214,0.00009858494,0.00018380722,0.0000015146722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045986635,0.00023926896,0.0443905,0.000027668717,0.00008870795,0.000021346332,0.0001828827,0.0000513938,0.9537296,0.000024967048,0.000001159735,0.0011964939],"study_design_scores_gemma":[0.00042933962,0.00023875207,0.0040661315,0.00001494911,0.00011892662,0.0000022416316,0.000090220885,0.001154447,0.99343747,0.0001479644,0.00004876035,0.0002507963],"about_ca_topic_score_codex":0.0002614611,"about_ca_topic_score_gemma":0.000029810446,"teacher_disagreement_score":0.23375861,"about_ca_system_score_codex":0.00003259268,"about_ca_system_score_gemma":0.00004702047,"threshold_uncertainty_score":0.99999183},"labels":[],"label_agreement":null},{"id":"W2413010444","doi":"10.1007/978-1-4939-3667-0_4","title":"Molecular and Functional Characterization of Histone Deacetylase 4 (HDAC4)","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University; Occupational Cancer Research Centre","funders":"","keywords":"HDAC4; Histone deacetylase 5; HDAC10; HDAC6; HDAC11; Histone deacetylase; Cell biology; Mef2; Cytoplasm; Nuclear export signal; Transcription factor; Histone deacetylase 2; Subcellular localization; Histone; Biology; Chemistry; Biochemistry; Enhancer; Cell nucleus; Gene","score_opus":0.017932189778620444,"score_gpt":0.3850185517724597,"score_spread":0.36708636199383926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413010444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5480188,0.00037742255,0.45100906,0.00018785778,0.000089176465,0.00013609273,0.000017576913,0.0000061638198,0.00015781801],"genre_scores_gemma":[0.8675011,0.000227162,0.1310642,0.00028222983,0.000086227104,0.000098197845,0.00017236182,0.000060232436,0.0005083153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99765235,0.0009390049,0.00039414037,0.0005615634,0.00012183134,0.00033108648],"domain_scores_gemma":[0.9991466,0.00006415482,0.00013166718,0.0004333395,0.00012615374,0.00009807879],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092780165,0.00019932045,0.00028977342,0.00022345147,0.000033004206,0.000005276023,0.0001588117,0.0003151087,0.00004742087],"category_scores_gemma":[0.0006714598,0.00016517511,0.000091456626,0.00019101832,0.00042103825,0.000005240296,0.00021444663,0.00011508808,0.0000053381937],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012589726,0.000059405993,0.0006684932,0.00001763967,0.000032868942,0.00001291105,0.000013960501,0.0000033251915,0.97999674,0.0013508255,0.000023452194,0.01769447],"study_design_scores_gemma":[0.00087196374,0.00026635424,0.0012393598,0.0000222737,0.000009537352,0.00003183406,0.0000051745083,0.000019254952,0.99175227,0.0004709554,0.0051146527,0.00019639339],"about_ca_topic_score_codex":0.000017230746,"about_ca_topic_score_gemma":0.00000650358,"teacher_disagreement_score":0.31994486,"about_ca_system_score_codex":0.000046528086,"about_ca_system_score_gemma":0.000097074604,"threshold_uncertainty_score":0.67356455},"labels":[],"label_agreement":null},{"id":"W2413110664","doi":"10.1007/978-1-4939-2871-2_14","title":"Expression and Purification of the Individual Bam Components BamB–E","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Bacterial outer membrane; Bama; Biology; Escherichia coli; Biochemistry; Bacteria; Membrane; Membrane protein; Affinity chromatography; Chemistry; Biophysics; Enzyme; Gene; Genetics","score_opus":0.062026746016147126,"score_gpt":0.3699015602412531,"score_spread":0.307874814225106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413110664","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7301973,0.00025254703,0.2686483,0.00007133051,0.00043109283,0.000090800866,0.0000039697775,0.000006842113,0.00029778792],"genre_scores_gemma":[0.57336944,0.0000031357908,0.42648867,0.00009373438,0.000017133256,0.000008032921,0.000005431312,0.000003892636,0.000010493178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985123,0.0010189501,0.00015232636,0.00015660122,0.000068006055,0.000091788985],"domain_scores_gemma":[0.9996133,0.000055798908,0.00008494667,0.00019202352,0.000029120396,0.000024854056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011209524,0.00005717679,0.00011027548,0.00004181656,0.000021647182,0.0000059701238,0.00014832463,0.000094720555,0.000012433555],"category_scores_gemma":[0.00027817697,0.00003656101,0.000016695258,0.00008878721,0.00012217501,0.000022613369,0.00011425094,0.000068047455,0.0000012118588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013078464,0.0000080829195,0.0030631395,0.0000037377765,0.0000013440606,2.555299e-7,0.00015719967,0.000012764974,0.99336636,0.0011372658,0.000024692703,0.0022120643],"study_design_scores_gemma":[0.00022338603,0.000037259528,0.009555941,0.0000074821655,0.00000557057,0.0000041961134,0.00003927533,0.000036919355,0.9776165,0.011782769,0.0006489912,0.000041713003],"about_ca_topic_score_codex":0.000023577417,"about_ca_topic_score_gemma":0.0000021083677,"teacher_disagreement_score":0.15784037,"about_ca_system_score_codex":0.000008922507,"about_ca_system_score_gemma":0.000014259042,"threshold_uncertainty_score":0.14909148},"labels":[],"label_agreement":null},{"id":"W2413125686","doi":"10.1007/978-1-61779-376-9_27","title":"Evaluation of Histone-Modifying Enzymes in Stem Cell Populations","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; McMaster University","funders":"","keywords":"Histone; Stem cell; Biology; Computational biology; Cell biology; Genetics; Gene","score_opus":0.1393316744104056,"score_gpt":0.47063510101191536,"score_spread":0.3313034266015098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413125686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5889201,0.008999875,0.3985117,0.000007825374,0.00015351962,0.00022607454,0.000003509842,0.0000035330277,0.0031738516],"genre_scores_gemma":[0.6940005,0.00007347315,0.3057901,0.000017715332,0.000012616745,0.000038380564,0.000031413892,0.000013328473,0.000022474685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969512,0.0019210932,0.00044098095,0.00035275778,0.00012669085,0.00020728058],"domain_scores_gemma":[0.9992654,0.000025744506,0.00016256192,0.00035283717,0.00016058136,0.000032929],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036604227,0.0001327735,0.00020969984,0.00022025604,0.00001928209,0.0000025776699,0.00016069945,0.0002615633,0.00002300694],"category_scores_gemma":[0.00021374924,0.0001400699,0.00007326572,0.00020777945,0.0000717769,0.0000026691098,0.00008059434,0.00010002356,0.0000010438599],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018487939,0.0000853504,0.017965844,0.000009880122,0.000009318155,9.990421e-7,0.00018646283,0.0006092141,0.9441424,0.0017196098,0.0000012277898,0.035251215],"study_design_scores_gemma":[0.00058590045,0.00014980139,0.011124607,0.000008415351,0.000032067815,7.0061606e-7,0.00006664739,0.0011769389,0.9750357,0.011473273,0.0001996469,0.00014625973],"about_ca_topic_score_codex":0.00017129794,"about_ca_topic_score_gemma":0.00014099939,"teacher_disagreement_score":0.10508037,"about_ca_system_score_codex":0.000045650195,"about_ca_system_score_gemma":0.00009137374,"threshold_uncertainty_score":0.57118845},"labels":[],"label_agreement":null},{"id":"W2413199773","doi":"10.1007/978-1-62703-080-9_8","title":"Generation of Transgenic X. laevis Models of Retinal Degeneration","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Transgene; Xenopus; Retinal degeneration; Genetically modified mouse; Biology; Retinal; Neuroscience; Cell biology; Retina; Genetics; Gene; Biochemistry","score_opus":0.05956524921001224,"score_gpt":0.38513520659607015,"score_spread":0.32556995738605793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413199773","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44947392,0.001530279,0.5482444,0.000020299178,0.00007989777,0.000085553664,0.0000026680004,0.0000017830346,0.00056115235],"genre_scores_gemma":[0.61390346,0.00017394307,0.38568458,0.000047819984,0.000037733404,0.000014227389,0.00010445431,0.000009085532,0.000024704008],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99860805,0.00056599913,0.00036500252,0.000194257,0.000060898838,0.00020576346],"domain_scores_gemma":[0.9995666,0.000015500907,0.00011950128,0.00019542564,0.000066888286,0.000036067744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009428786,0.00011674283,0.00020126117,0.000092682385,0.000015258698,0.000001887027,0.00011627994,0.00019918375,0.000014584367],"category_scores_gemma":[0.00011069079,0.00011289888,0.00009061044,0.00013275129,0.00008728915,0.0000048828633,0.000038378108,0.000056054574,4.6911597e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046552177,0.000053850603,0.0076266476,0.000018188015,0.00002125196,1.2517924e-7,0.00008637994,0.00045009344,0.98286396,0.004243629,0.000021238473,0.0045680744],"study_design_scores_gemma":[0.00030739256,0.00014603432,0.0005576505,0.0000052809182,0.000014544582,0.0000024337141,0.000023106382,0.0006084164,0.9966119,0.0010892052,0.000515643,0.00011840228],"about_ca_topic_score_codex":0.000014902861,"about_ca_topic_score_gemma":0.000008553944,"teacher_disagreement_score":0.16442952,"about_ca_system_score_codex":0.0000073290744,"about_ca_system_score_gemma":0.000043104374,"threshold_uncertainty_score":0.46038827},"labels":[],"label_agreement":null},{"id":"W2413282289","doi":"10.1007/978-1-4939-3043-2_14","title":"Production of Virus-Like Particles for Vaccination","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Waterloo; Polytechnique Montréal; National Research Council Canada","funders":"","keywords":"Virus-like particle; Virology; Virus; Delivery system; Vaccination; Host (biology); Biology; Genetics","score_opus":0.02053108005000172,"score_gpt":0.3879703520686098,"score_spread":0.3674392720186081,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413282289","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29787305,0.0004885888,0.70071507,0.00015454009,0.00043651104,0.00024110856,0.00001229794,0.000007874828,0.00007095145],"genre_scores_gemma":[0.7120516,0.0001953676,0.28694308,0.00018611587,0.00013071009,0.00022233743,0.000028154584,0.00002321403,0.00021948402],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988355,0.00036589947,0.00024557274,0.00033376386,0.0000360399,0.00018323779],"domain_scores_gemma":[0.9994371,0.00004498463,0.00011009965,0.0002744797,0.00009893143,0.00003438334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005251547,0.00010363069,0.00014435659,0.00007167661,0.000028321138,0.0000029518249,0.00010732965,0.00014541822,0.000018984183],"category_scores_gemma":[0.0007728533,0.00007486918,0.00010024473,0.000089901,0.000057587727,0.0000031471075,0.000060204515,0.000026615979,0.0000011095046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012708662,0.000068678964,0.0022631604,0.000015633781,0.000021649637,2.5068576e-7,0.000008992148,0.000027186565,0.9432849,0.00091375323,0.00037134005,0.05289734],"study_design_scores_gemma":[0.0005130014,0.00039966413,0.0010343242,0.000012689885,0.000010313913,0.0000026190255,0.000007819333,0.00001790783,0.9774694,0.01085756,0.00956533,0.000109387045],"about_ca_topic_score_codex":0.0000096232325,"about_ca_topic_score_gemma":0.000014301081,"teacher_disagreement_score":0.4141785,"about_ca_system_score_codex":0.000011839484,"about_ca_system_score_gemma":0.000030016028,"threshold_uncertainty_score":0.3053077},"labels":[],"label_agreement":null},{"id":"W2413332554","doi":"10.1007/978-1-4939-0758-8_21","title":"Sample Types, Collection, and Transport for Influenza A Viruses of Swine","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Virology; Virus isolation; Isolation (microbiology); Sample (material); Virus; Biology; Medicine; Microbiology; Chemistry; Chromatography","score_opus":0.10961409280795885,"score_gpt":0.5025258978011738,"score_spread":0.392911804993215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413332554","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.087569185,0.0014595768,0.90987086,0.00014340215,0.000050100087,0.00049521757,0.000020614463,0.000016291508,0.00037477736],"genre_scores_gemma":[0.017529234,0.000087906614,0.98062277,0.0015466306,0.000032399934,0.00012375071,0.0000076681235,0.000018260034,0.000031371164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988462,0.00034354214,0.00029835114,0.00022656149,0.000061003502,0.00022438448],"domain_scores_gemma":[0.9987728,0.0007872361,0.000055897774,0.00018519472,0.00015106077,0.000047796122],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001408737,0.00010683453,0.0004317856,0.00021637545,0.00003712496,0.000001522549,0.000057406585,0.00012210441,0.000016044918],"category_scores_gemma":[0.0041868505,0.00008900728,0.000061944214,0.00024796737,0.00022653135,0.000011041091,0.000032462445,0.00011397141,4.8465176e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00094582915,0.00008956143,0.15734847,0.00027199608,0.00018467539,0.0000028066365,0.00029539407,0.000018497547,0.806816,0.0090438025,0.000057862824,0.02492515],"study_design_scores_gemma":[0.0078043034,0.003223453,0.048150692,0.000103956176,0.0001965107,0.000021148462,0.00008522074,0.0014746573,0.62053454,0.035287857,0.2827701,0.00034755003],"about_ca_topic_score_codex":0.00027391355,"about_ca_topic_score_gemma":0.00003845682,"teacher_disagreement_score":0.28271222,"about_ca_system_score_codex":0.000023861337,"about_ca_system_score_gemma":0.00005560835,"threshold_uncertainty_score":0.50123537},"labels":[],"label_agreement":null},{"id":"W2413343367","doi":"10.1007/978-1-62703-110-3_12","title":"Biolistic Transfection of Freshly Isolated Adult Ventricular Myocytes","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Heart and Stroke Foundation of British Columbia and Yukon; Heart and Stroke Foundation of Canada","keywords":"Transfection; Myocyte; Cell biology; Molecular biology; Gene expression; Gene; Biology; Function (biology); Cell culture; Gene gun; Chemistry; Genetics; Plasmid","score_opus":0.014556476739239411,"score_gpt":0.35397586352208377,"score_spread":0.33941938678284433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413343367","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44887617,0.0027691114,0.5475754,0.000027930751,0.000275164,0.00012553351,0.000011579693,0.00000764005,0.00033147374],"genre_scores_gemma":[0.90105915,0.0002790056,0.098084554,0.0002442727,0.00010958673,0.000033927703,0.00010994708,0.00002247371,0.00005710529],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981748,0.0007075684,0.00036484696,0.00030710452,0.00005528458,0.0003903797],"domain_scores_gemma":[0.9993517,0.000038483646,0.00009566913,0.00032880018,0.00011307357,0.000072291965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059112144,0.0001876756,0.0002768426,0.00015452187,0.00002457579,0.0000045308616,0.00020566068,0.0003478719,0.000046040554],"category_scores_gemma":[0.0003351412,0.00017433154,0.00015982491,0.00023395443,0.000118360316,0.000004388058,0.00006559612,0.00013438113,0.000008521131],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096593045,0.00011220268,0.01000144,0.000019028657,0.00006991262,0.0000045365323,0.000041269206,0.000038500737,0.98173213,0.0007790539,0.000037579564,0.0070677474],"study_design_scores_gemma":[0.0004575796,0.00052974536,0.0014412693,0.000018008424,0.000034056426,0.000033498418,0.00003605953,0.0001487389,0.99273694,0.00057109917,0.0037792826,0.00021372453],"about_ca_topic_score_codex":0.000073789626,"about_ca_topic_score_gemma":0.000012260077,"teacher_disagreement_score":0.45218295,"about_ca_system_score_codex":0.000015736923,"about_ca_system_score_gemma":0.000029209503,"threshold_uncertainty_score":0.71090335},"labels":[],"label_agreement":null},{"id":"W2413372641","doi":"10.1007/978-1-62703-751-8_8","title":"Tobacco Mosaic Virus Capsid Protein as Targets for the Self-Assembly of Gold Nanoparticles","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Capsid; Tobacco mosaic virus; Nanotechnology; Coat protein; Template; Colloidal gold; Nanoparticle; Nanoscopic scale; Phenylphosphine; Chemistry; Materials science; Virus; Biology; Virology; Biochemistry; RNA","score_opus":0.012947481279451684,"score_gpt":0.32918872568715296,"score_spread":0.3162412444077013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413372641","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9175415,0.00020787417,0.080107816,0.0005718627,0.00015858225,0.00095770194,0.000012545765,0.000018550258,0.00042358783],"genre_scores_gemma":[0.30206078,0.000023570903,0.6966259,0.00044268172,0.000015288171,0.0005132083,0.00000601108,0.000017017906,0.00029553325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891,0.00034511025,0.00023534834,0.00022682433,0.000030202087,0.0002524761],"domain_scores_gemma":[0.99945694,0.00015537567,0.00008986107,0.00025012103,0.000013004815,0.00003471103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044011947,0.000107783926,0.00015992655,0.000025063513,0.000044988617,0.000013392362,0.00024978744,0.00009173386,0.00059594214],"category_scores_gemma":[0.0001369864,0.000075717326,0.00007891249,0.00013245574,0.00011851142,0.00005795456,0.0001506897,0.000098087374,0.0000856269],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008907727,0.00006349547,0.00012487143,0.0000033497688,0.000016694987,9.05147e-7,0.00008270206,0.0000333977,0.97312677,0.00036003275,0.0002301879,0.02594867],"study_design_scores_gemma":[0.00015325185,0.0001239046,0.001524694,0.0000045363113,0.000011587415,0.000005247655,0.00004032729,0.00022217633,0.9773387,0.0023489308,0.018137697,0.000088999666],"about_ca_topic_score_codex":0.0031811916,"about_ca_topic_score_gemma":0.00022182887,"teacher_disagreement_score":0.6165181,"about_ca_system_score_codex":0.00004987547,"about_ca_system_score_gemma":0.000010346698,"threshold_uncertainty_score":0.6525148},"labels":[],"label_agreement":null},{"id":"W2413386661","doi":"10.1007/978-1-59745-205-2_6","title":"Pharmacogenomics of G Protein-Coupled Receptor","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pharmacogenomics; Pharmacology; Medicine; Computational biology; Biology","score_opus":0.04419383422615238,"score_gpt":0.42269668613660266,"score_spread":0.3785028519104503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413386661","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001051254,0.7197795,0.2788395,0.000002745042,0.00030695336,0.0007919643,0.000037620037,0.000008480461,0.00012810681],"genre_scores_gemma":[0.0000015584673,0.6264672,0.37275144,0.000027905926,0.00011453065,0.00017408142,0.00028816238,0.00007507543,0.00010004355],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955007,0.0019403192,0.0010981314,0.00087781774,0.00009587339,0.00048718907],"domain_scores_gemma":[0.9984467,0.00006780936,0.0006227078,0.0006764108,0.0000896302,0.00009676839],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009857164,0.00057957234,0.0018613684,0.00028631644,0.000039919534,0.00000705855,0.0006785232,0.0011518257,0.00013673773],"category_scores_gemma":[0.00032970952,0.00051940023,0.0008173555,0.00032412464,0.00018152781,0.0000015137609,0.0003219028,0.0004326908,0.000010198483],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015828045,0.00004179709,6.49847e-7,0.00071281707,0.00015331699,0.0000072138296,0.0000069331395,0.0000037023126,0.62404007,0.00020701445,0.000017290424,0.37479338],"study_design_scores_gemma":[0.00026605025,0.0002114947,1.942219e-8,0.0005076766,0.00007247536,0.000042263015,0.0000037611608,0.000010857171,0.27656382,0.00016904449,0.7217477,0.00040480183],"about_ca_topic_score_codex":0.000016900014,"about_ca_topic_score_gemma":0.0000011058241,"teacher_disagreement_score":0.7217304,"about_ca_system_score_codex":0.000047813228,"about_ca_system_score_gemma":0.0003647347,"threshold_uncertainty_score":0.99972576},"labels":[],"label_agreement":null},{"id":"W2413395767","doi":"10.1007/978-1-60327-321-3_18","title":"Novel Tools for Use in Bioluminescence Resonance Energy Transfer (BRET) Assays","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Bimolecular fluorescence complementation; Bioluminescence; Förster resonance energy transfer; Complementation; Energy transfer; Fluorescence; Protein-fragment complementation assay; Protein–protein interaction; Biophysics; Chemistry; Luciferase; Cell biology; Biochemistry; Biology; Transfection; Physics; Gene; Chemical physics","score_opus":0.05178489706042056,"score_gpt":0.39096905299435386,"score_spread":0.3391841559339333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413395767","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07821132,0.0018593697,0.91873497,0.00037384237,0.00012176542,0.00043331756,0.000044298755,0.00001793443,0.00020315578],"genre_scores_gemma":[0.41100594,0.00093594566,0.58468854,0.0020718125,0.00020123755,0.00030453072,0.000404516,0.00005645772,0.00033102708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969657,0.00040076097,0.0005676216,0.0010294693,0.00012318726,0.0009132416],"domain_scores_gemma":[0.99881864,0.00019473414,0.000056822144,0.000657547,0.00015140191,0.00012085096],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012024522,0.00036052175,0.00046653184,0.00022433377,0.00005098285,0.00005243156,0.0006147445,0.0006817712,0.0000072989496],"category_scores_gemma":[0.0012015558,0.0003543355,0.00020060499,0.0005644315,0.00025324372,0.000026884667,0.0000915941,0.00025312798,0.0000010718333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024362425,0.00020464919,0.002633798,0.000014977915,0.000010153062,0.000012915501,0.000013938033,0.000009957091,0.93269175,0.002951266,0.00007303666,0.061139926],"study_design_scores_gemma":[0.0014481323,0.00055492355,0.0019779585,0.00005461645,0.0000075127095,0.000028359596,0.000027646758,0.0005955715,0.97314155,0.00085951807,0.020824533,0.00047969064],"about_ca_topic_score_codex":0.00013410301,"about_ca_topic_score_gemma":0.00019320787,"teacher_disagreement_score":0.33404645,"about_ca_system_score_codex":0.000050300834,"about_ca_system_score_gemma":0.00013646945,"threshold_uncertainty_score":0.99989086},"labels":[],"label_agreement":null},{"id":"W2413403500","doi":"10.1007/978-1-60327-003-8_8","title":"Cell-Based Identification of Natural Substrates and Cleavage Sites for Extracellular Proteases by SILAC Proteomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Stable isotope labeling by amino acids in cell culture; Proteolysis; Protease; Proteases; Biochemistry; Proteome; Biology; Proteomics; Extracellular; Chemistry; Cell biology; Enzyme","score_opus":0.013724000288207437,"score_gpt":0.36589681026661625,"score_spread":0.35217280997840883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413403500","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22322084,0.0017540714,0.77417207,0.00012042089,0.000005285888,0.0006055111,0.000048365033,0.000034009685,0.00003941954],"genre_scores_gemma":[0.35449094,0.000022764443,0.6449708,0.000030330022,0.000006196531,0.00031720518,0.000108632616,0.00001031718,0.000042873104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900347,0.000082413026,0.00037172687,0.0003301056,0.00003470948,0.00017757001],"domain_scores_gemma":[0.9992858,0.00013234594,0.0002314163,0.00027005587,0.00005132872,0.000029044468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004016519,0.00013892853,0.00020932005,0.000052444768,0.000041723328,0.000011268737,0.00016033018,0.00017923556,0.0000052401374],"category_scores_gemma":[0.00016446727,0.00013957084,0.00005833815,0.00009642315,0.00010740232,0.000024741737,0.000017438933,0.00014981817,1.7040314e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040479685,0.00008496169,0.0002582712,0.0000765494,0.0000035073165,4.7184383e-7,0.000011482931,0.000025385641,0.9935569,0.0019562764,0.0000129796235,0.003972701],"study_design_scores_gemma":[0.00029260645,0.000062057334,0.000019838853,0.000011580279,0.000011375927,0.000001105789,0.000014277262,0.0027055277,0.9590411,0.037448112,0.00025335595,0.00013906285],"about_ca_topic_score_codex":0.0000047925487,"about_ca_topic_score_gemma":3.7486092e-7,"teacher_disagreement_score":0.1312701,"about_ca_system_score_codex":0.000020746473,"about_ca_system_score_gemma":0.000019217012,"threshold_uncertainty_score":0.56915337},"labels":[],"label_agreement":null},{"id":"W2413416888","doi":"10.1007/978-1-61779-117-8_3","title":"Repair of CFTR Folding Defects with Correctors that Function as Pharmacological Chaperones","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Endoplasmic reticulum; Protein folding; Cell biology; Mutant; Folding (DSP implementation); Chaperone (clinical); Cystic fibrosis; Function (biology); Chemistry; Mutation; Biology; Biochemistry; Genetics; Medicine; Gene; Pathology","score_opus":0.06884988144498164,"score_gpt":0.433697325680199,"score_spread":0.3648474442352173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413416888","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5885676,0.0008917288,0.40843457,0.000017136344,0.00017105877,0.00032259454,9.60469e-7,0.00005240233,0.0015419367],"genre_scores_gemma":[0.45171615,0.00004136397,0.54799986,0.00012990211,0.000015016272,0.000047424586,0.000004496149,0.000012919446,0.000032840642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812907,0.00084491,0.00021523761,0.00035828576,0.00012975106,0.00032272335],"domain_scores_gemma":[0.9991502,0.00038091862,0.000091076254,0.00021119474,0.00007136897,0.000095202566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000929683,0.00014592825,0.00039883595,0.0002086974,0.000024285704,0.0000015395359,0.00008929018,0.00013508355,0.00034062142],"category_scores_gemma":[0.0009983606,0.00010087831,0.00009809092,0.0003056483,0.00030055954,0.000029068487,0.000079832185,0.00024429063,0.000005137505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016191079,0.00013313247,0.08491012,0.00004937474,0.00009870601,0.0001089319,0.000101590806,0.0000049013906,0.90065205,0.0012059287,0.00000890663,0.011107235],"study_design_scores_gemma":[0.0013520385,0.004883568,0.043316778,0.00007942951,0.00012518108,0.00010255803,0.00018975952,0.00021207028,0.94646275,0.0019455419,0.0011847378,0.00014559909],"about_ca_topic_score_codex":0.0000816687,"about_ca_topic_score_gemma":0.000008058552,"teacher_disagreement_score":0.13956532,"about_ca_system_score_codex":0.000047324258,"about_ca_system_score_gemma":0.000059852402,"threshold_uncertainty_score":0.4113698},"labels":[],"label_agreement":null},{"id":"W2413418664","doi":"10.1007/978-1-60761-103-5","title":"Meiosis","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; National Institute of General Medical Sciences; Iran Telecommunication Research Center; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Universiteit Utrecht; Oklahoma Medical Research Foundation; York University; De La Salle University; Rutgers, The State University of New Jersey; University of Oxford; Harvard University; Colorado State University; Washington State University; Wageningen University and Research; Medical Research Council; Universität Wien; National Institute of Information and Communications Technology; Memorial Sloan-Kettering Cancer Center","keywords":"Meiosis; Biology; Genetics","score_opus":0.04007754145949064,"score_gpt":0.4317005756150997,"score_spread":0.39162303415560906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413418664","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000114734576,0.0104715405,0.22989884,0.0011914469,0.00043770068,0.0007865629,0.000010026821,0.000078569006,0.7570106],"genre_scores_gemma":[0.000032734217,0.00019602482,0.6877703,0.0034654902,0.00025564435,0.000035480476,0.00021166274,0.000037935763,0.30799475],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968981,0.0012599089,0.00048572515,0.0009393174,0.000065639186,0.00035129933],"domain_scores_gemma":[0.9985065,0.00018591322,0.00014954184,0.0009436563,0.00013104781,0.000083370134],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019207039,0.0003383594,0.0010479789,0.000296332,0.000023693592,0.0000027609738,0.00019132967,0.0014881679,0.00023714865],"category_scores_gemma":[0.0017461566,0.00028229714,0.00028224592,0.00012007311,0.0003765047,0.000008087644,0.00008920623,0.0009924676,0.000055599812],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030404318,0.00048195972,0.0030051048,0.0002805939,0.0007974368,0.00087756297,0.00011613756,0.0000010337458,0.4378018,0.02273116,0.021255476,0.5096113],"study_design_scores_gemma":[0.0009007615,0.0010212492,0.009806457,0.00013146031,0.0002614822,0.00016495166,0.0000029231405,0.00000643162,0.04265668,0.21681702,0.72773695,0.0004936094],"about_ca_topic_score_codex":0.000005383111,"about_ca_topic_score_gemma":0.0000011568474,"teacher_disagreement_score":0.7064815,"about_ca_system_score_codex":0.00019193695,"about_ca_system_score_gemma":0.00029629632,"threshold_uncertainty_score":0.9999629},"labels":[],"label_agreement":null},{"id":"W2413421032","doi":"10.1007/978-1-60761-723-5_8","title":"Microbial Expression of Alkaloid Biosynthetic Enzymes for Characterization of Their Properties","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Enzyme; Biochemistry; Escherichia coli; Biosynthesis; Secondary metabolism; Biology; Cytochrome P450; Metabolism; Metabolite; Secondary metabolite; Chemistry; Gene","score_opus":0.021161656020724097,"score_gpt":0.3242073681571937,"score_spread":0.3030457121364696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413421032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9498817,0.00024342179,0.04843117,0.00053794513,0.00027855166,0.0005513029,0.000037333954,0.0000102232625,0.000028381934],"genre_scores_gemma":[0.68522674,0.000025137588,0.31453428,0.00008825053,0.00004589543,0.000004235368,0.000029009158,0.000012081444,0.000034347075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99899876,0.00024007855,0.00034555796,0.00023400898,0.0000311941,0.00015040532],"domain_scores_gemma":[0.9993533,0.00007943969,0.00016362152,0.00025208795,0.00012761047,0.000023973933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006670548,0.00011895317,0.00039808406,0.0001497638,0.000016273412,0.0000021974279,0.000109096574,0.00022344262,0.000036253725],"category_scores_gemma":[0.00069725816,0.000074496114,0.00010477154,0.00011962753,0.00019234234,0.000016091291,0.00004855723,0.0001401172,2.995677e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027530908,0.0000954175,0.00012778361,0.00016569586,0.000015131798,4.3775015e-7,0.00009837939,8.3309715e-8,0.97908217,0.00033448235,0.0000045822494,0.019800503],"study_design_scores_gemma":[0.00038803683,0.00019421146,0.0001925448,0.00009914816,0.00002411303,0.000010525177,0.000013088562,0.000019866968,0.99641204,0.00028202333,0.002283732,0.0000806739],"about_ca_topic_score_codex":0.000011106783,"about_ca_topic_score_gemma":0.0000020923715,"teacher_disagreement_score":0.26610312,"about_ca_system_score_codex":0.000005976519,"about_ca_system_score_gemma":0.000037787737,"threshold_uncertainty_score":0.30378634},"labels":[],"label_agreement":null},{"id":"W2413448812","doi":"10.1007/978-1-59745-512-1_3","title":"Physical Mapping of Salmonella Genomes","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Genome; Biology; Genetics; Bacterial genome size; genomic DNA; Restriction enzyme; Salmonella; DNA; Restriction map; Gene; Plasmid; Bacteria","score_opus":0.04568162749050638,"score_gpt":0.3777920508726319,"score_spread":0.33211042338212554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413448812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9037944,0.000824749,0.093120664,0.00015831526,0.00013023603,0.000108621534,0.0000041509916,0.00002273171,0.0018361327],"genre_scores_gemma":[0.8036406,0.00004659322,0.19575085,0.00036913456,0.00013693229,0.0000065584645,0.000019405139,0.0000015194872,0.00002842605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979847,0.00083167106,0.0003853174,0.00033425534,0.00005087923,0.0004131713],"domain_scores_gemma":[0.99848396,0.0012006515,0.00013040956,0.00008886391,0.000034278586,0.0000618178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022049423,0.00014107038,0.00042182484,0.00004273546,0.000027005395,0.0000029468283,0.00027392147,0.00019290602,0.000052529784],"category_scores_gemma":[0.000258412,0.000059917114,0.00014333316,0.000433847,0.00016061695,0.0000131711895,0.000107951,0.00015786823,0.0000061898004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015168106,0.000045378383,0.03964523,0.0000029622677,0.000009792877,0.000009091369,0.000056011282,0.0000028352151,0.78168017,0.0022945802,0.000002890574,0.17623587],"study_design_scores_gemma":[0.00026166684,0.00044528412,0.24415539,0.000014978629,0.000013637772,0.00002746648,0.0003916003,0.00016076138,0.6805135,0.05966717,0.013970676,0.0003778792],"about_ca_topic_score_codex":0.00012339528,"about_ca_topic_score_gemma":0.000041631723,"teacher_disagreement_score":0.20451017,"about_ca_system_score_codex":0.000017568409,"about_ca_system_score_gemma":0.0000047699405,"threshold_uncertainty_score":0.2443349},"labels":[],"label_agreement":null},{"id":"W2413459864","doi":"10.1007/978-1-4939-2013-6_5","title":"Methods to Assess the Nucleocytoplasmic Shuttling of the HPV E1 Helicase and Its Effects on Cellular Proliferation and Induction of a DNA Damage Response","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Control of chromosome duplication; Cell biology; Biology; Eukaryotic DNA replication; DNA replication; Cell cycle; DNA damage; Origin recognition complex; DNA; DNA replication factor CDT1; S phase; DNA re-replication; Molecular biology; Cell; Genetics","score_opus":0.02307883377583554,"score_gpt":0.3677611439871031,"score_spread":0.34468231021126755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413459864","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65225303,0.00017101823,0.34685355,0.0001737544,0.00011649151,0.00040197058,0.0000025230843,0.0000043184896,0.000023341483],"genre_scores_gemma":[0.69901335,0.00001151007,0.30053285,0.00033008124,0.00002837538,0.00004860629,0.0000034237355,0.000018080504,0.000013711494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9911725,0.007850555,0.00029459424,0.0004149627,0.00008028584,0.00018712015],"domain_scores_gemma":[0.99869466,0.00051229214,0.00016344072,0.00050922116,0.000072775976,0.000047641082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005205188,0.00017222337,0.00027620466,0.00010581469,0.000060780734,0.000009649055,0.0002113045,0.0002596073,0.0000013194015],"category_scores_gemma":[0.0035566862,0.000116937386,0.00006617758,0.00019390813,0.00011028362,0.0000032410912,0.0002747328,0.00016745376,2.6302706e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035469182,0.000026217002,0.00019701298,0.00004570443,0.00002576047,0.0000011749092,0.000099096666,0.00006769171,0.98287463,0.0019274366,0.0000014168579,0.014379142],"study_design_scores_gemma":[0.00042147367,0.0008654554,0.0012289141,0.000028659018,0.000028791828,0.000015565753,0.000031339463,0.0013554126,0.9939335,0.0014697401,0.00050363364,0.00011752434],"about_ca_topic_score_codex":0.000004103,"about_ca_topic_score_gemma":0.0000030727992,"teacher_disagreement_score":0.046760343,"about_ca_system_score_codex":0.000012431382,"about_ca_system_score_gemma":0.000034404882,"threshold_uncertainty_score":0.47685683},"labels":[],"label_agreement":null},{"id":"W2413469350","doi":"10.1007/978-1-62703-986-4_4","title":"On the Statistics of Identifying Candidate Pathogen Effectors","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Effector; Biology; Computational biology; Candidate gene; Gene; Genetics; Immunology","score_opus":0.025880788032497277,"score_gpt":0.330977164661352,"score_spread":0.30509637662885475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413469350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89380497,0.000096308395,0.105057284,0.00016913645,0.00019648425,0.00016042842,0.00018653685,0.000012453534,0.00031637365],"genre_scores_gemma":[0.8030716,0.00005379573,0.19618405,0.0004651836,0.000054894404,0.000047173875,0.00009303165,0.0000021246783,0.000028093855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973091,0.002019621,0.00020528086,0.00020561344,0.000057449557,0.00020294591],"domain_scores_gemma":[0.997367,0.0024047329,0.00010155439,0.00008143901,0.000022889275,0.000022365395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016514757,0.00010783942,0.0002285236,0.000015310487,0.00005666724,0.0000074860386,0.00024015814,0.00007813432,0.000058472615],"category_scores_gemma":[0.0009781759,0.000034534798,0.00004908381,0.00016479782,0.00010441789,0.0000070319993,0.00010217086,0.00010467666,0.0000050121116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010998848,0.000013149068,0.0025256793,0.0000039153256,0.00001222846,0.000002720048,0.000021798425,0.0000016545416,0.94571465,0.01520274,0.000024912055,0.036465548],"study_design_scores_gemma":[0.0003342063,0.0008790835,0.11400023,0.00006576574,0.000045916557,0.000017557175,0.00009306958,0.00032682528,0.7742497,0.10284163,0.0067088674,0.00043715062],"about_ca_topic_score_codex":0.0000901794,"about_ca_topic_score_gemma":0.00013556323,"teacher_disagreement_score":0.17146495,"about_ca_system_score_codex":0.000010090147,"about_ca_system_score_gemma":0.0000028543311,"threshold_uncertainty_score":0.14082882},"labels":[],"label_agreement":null},{"id":"W2413480969","doi":"10.1007/978-1-62703-465-4_14","title":"In Vitro UDP-Sugar:Undecaprenyl-Phosphate Sugar-1-Phosphate Transferase Assay and Product Detection by Thin Layer Chromatography","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Thin-layer chromatography; Chemistry; Sugar phosphates; Sugar; Chromatography; Phosphate; Biochemistry; In vitro; Transferase; Substrate (aquarium); Enzyme; Biology","score_opus":0.007886594171576328,"score_gpt":0.2975723867778554,"score_spread":0.2896857926062791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413480969","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6384609,0.020412516,0.33924803,0.00037222297,0.00039057282,0.0007778462,0.000022436794,0.000020878166,0.00029463082],"genre_scores_gemma":[0.84488076,0.0022309194,0.15052219,0.0014424775,0.000073014744,0.00042491785,0.00016360094,0.00007521075,0.00018692976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960508,0.0015675835,0.0005551176,0.0010543537,0.0001112458,0.0006609071],"domain_scores_gemma":[0.999039,0.000057288107,0.00010536743,0.0005836508,0.00006699984,0.00014769114],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015042297,0.00041367277,0.0005016636,0.0002355699,0.0000636578,0.000043954373,0.00031160805,0.00042911718,0.0000699887],"category_scores_gemma":[0.00025826288,0.00039207924,0.00014468614,0.000423289,0.00026902067,0.000014175219,0.00012610201,0.00028599505,0.000008014485],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010882429,0.00010664996,0.0019274021,0.000028928443,0.000055173663,0.000005898104,0.0000727004,0.000022750337,0.9394624,0.00007628313,0.00015013723,0.05798282],"study_design_scores_gemma":[0.001388076,0.00016830998,0.0020674774,0.000007789214,0.000025942127,0.000016221671,0.000052877185,0.0002527355,0.97887754,0.0031290776,0.013563724,0.00045021757],"about_ca_topic_score_codex":0.0005731621,"about_ca_topic_score_gemma":0.00010310557,"teacher_disagreement_score":0.20641987,"about_ca_system_score_codex":0.000008378835,"about_ca_system_score_gemma":0.00003957396,"threshold_uncertainty_score":0.99985313},"labels":[],"label_agreement":null},{"id":"W2413482060","doi":"10.1007/978-1-60761-847-8_7","title":"Confocal Imaging of Butterfly Tissue","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"","keywords":"Butterfly; Biology; Immunofluorescence; Imaginal disc; Gene expression; Phenotype; Gene; Cell biology; Evolutionary biology; Antibody; Genetics; Ecology","score_opus":0.012126063277832853,"score_gpt":0.34559610638722116,"score_spread":0.3334700431093883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413482060","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09975446,0.0031546631,0.8941707,0.00038912863,0.00075076177,0.00036310527,0.0000054756933,0.000039687224,0.0013720441],"genre_scores_gemma":[0.4865822,0.000025152545,0.5114272,0.0010041189,0.0000106089965,0.00011145533,0.00004467183,0.000038018265,0.0007565484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959532,0.0027792742,0.0004716775,0.00032733358,0.000017421533,0.000451086],"domain_scores_gemma":[0.9990457,0.00031102187,0.00013435532,0.00040945233,0.00008273071,0.000016725013],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010315782,0.0001912916,0.000459732,0.00026693218,0.00003405018,0.000005923247,0.00035290027,0.00030987183,0.0014587098],"category_scores_gemma":[0.0003598311,0.00017382878,0.00007840391,0.0001877559,0.00037661594,0.000037860882,0.00018227079,0.00031437594,0.00043231813],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028692435,0.000039740666,0.00065655215,0.0000083552595,0.000041090385,0.000009367444,0.00009420063,0.0000016051401,0.9307513,0.011691568,0.00009591395,0.056581583],"study_design_scores_gemma":[0.00068286917,0.0001379471,0.0004967687,0.000014401535,0.000012065926,0.00008541146,0.000089931294,0.00005639506,0.9793288,0.013995633,0.00493107,0.00016867025],"about_ca_topic_score_codex":0.00045640217,"about_ca_topic_score_gemma":0.000002848595,"teacher_disagreement_score":0.38682774,"about_ca_system_score_codex":0.00002869124,"about_ca_system_score_gemma":0.000048010497,"threshold_uncertainty_score":0.9994541},"labels":[],"label_agreement":null},{"id":"W2413529471","doi":"10.1007/978-1-61779-539-8_8","title":"Targeted Gene Deletion in Aspergillus fumigatus Using the Hygromycin-Resistance Split-Marker Approach","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Biology; Transformation (genetics); Homologous recombination; Hygromycin B; Marker gene; Gene; Genetics; Recombination; Mutant; Aspergillus fumigatus; Protoplast; Microbiology","score_opus":0.041566021061032465,"score_gpt":0.3984604710146541,"score_spread":0.35689444995362163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413529471","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5333397,0.005928588,0.45862216,0.000115930554,0.00013590636,0.0003435683,0.0000028261413,0.000014600989,0.0014967476],"genre_scores_gemma":[0.5066489,0.000045494322,0.4927654,0.00034124966,0.00005163923,0.000022001832,0.000019409174,0.000016111908,0.00008977932],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99638987,0.0019742798,0.00045630676,0.00042383795,0.00013156736,0.00062412524],"domain_scores_gemma":[0.9989629,0.00020133515,0.00009725924,0.0005778086,0.00006158403,0.00009912621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034960203,0.00021349914,0.00047827323,0.00014511324,0.000060730268,0.0000067968767,0.0001586167,0.00029762433,0.00004872258],"category_scores_gemma":[0.0008769154,0.00015179116,0.00013293474,0.0005455584,0.00025812013,0.00004459264,0.00007926817,0.00046530314,0.0000036135018],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026535662,0.00015844485,0.1755321,0.000050094983,0.000031235526,0.000019605195,0.0001835136,0.000028115426,0.8185894,0.0023384045,0.000008965879,0.002794764],"study_design_scores_gemma":[0.0023063796,0.00013737357,0.7724797,0.000110834866,0.00014491196,0.00007637801,0.00061998726,0.0037732183,0.21040545,0.0039817984,0.0053409054,0.0006230509],"about_ca_topic_score_codex":0.00010085188,"about_ca_topic_score_gemma":0.000045272696,"teacher_disagreement_score":0.6081839,"about_ca_system_score_codex":0.00020643293,"about_ca_system_score_gemma":0.00007484984,"threshold_uncertainty_score":0.61898637},"labels":[],"label_agreement":null},{"id":"W2413548647","doi":"10.1007/978-1-4939-2639-8_18","title":"In Planta Analysis of Leaf Mitochondrial Superoxide and Nitric Oxide","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Nitric oxide; Superoxide; Chemistry; Biochemistry; Organic chemistry; Enzyme","score_opus":0.028072202967082942,"score_gpt":0.3614884539621473,"score_spread":0.33341625099506433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413548647","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6456528,0.0008282883,0.35257167,0.000057266476,0.00025955323,0.00013665138,0.000016230084,0.0000041445037,0.00047345742],"genre_scores_gemma":[0.10163844,0.00025766456,0.8961516,0.0010567557,0.00015111068,0.00006450703,0.00027955053,0.00003461076,0.00036575831],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973019,0.0013793405,0.0004549212,0.0005182819,0.00006581804,0.00027978318],"domain_scores_gemma":[0.99926084,0.0000913393,0.00010178199,0.0003860657,0.00006128722,0.00009866571],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008896124,0.00017921366,0.00053302065,0.00067318557,0.000012191014,0.000005264546,0.00018456984,0.00040944945,0.000022288552],"category_scores_gemma":[0.0009794119,0.00017366324,0.00011991623,0.0007585974,0.00016257908,0.0000033473157,0.00015326767,0.00016262924,0.0000018502001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028600218,0.000051128365,0.03058894,0.0000054398224,0.00012807989,0.000023820507,0.000047196678,0.00020971196,0.96702,0.00088158855,0.00011706633,0.00064104644],"study_design_scores_gemma":[0.003018125,0.00051756616,0.006992939,0.000008829088,0.00026557592,0.00006761442,0.00022317804,0.00046781875,0.96745825,0.0027833038,0.01773988,0.00045693704],"about_ca_topic_score_codex":0.00026814858,"about_ca_topic_score_gemma":0.00021565224,"teacher_disagreement_score":0.54401433,"about_ca_system_score_codex":0.000018081644,"about_ca_system_score_gemma":0.00007024312,"threshold_uncertainty_score":0.70817816},"labels":[],"label_agreement":null},{"id":"W2413635100","doi":"10.1007/978-1-62703-330-5_19","title":"Isolation and Differentiation of Hair Follicle-Derived Dermal Precursors","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hair Growth and Disorders","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Hair follicle; Isolation (microbiology); Cell biology; Biology; Bioinformatics","score_opus":0.014430115255035958,"score_gpt":0.34938472467980275,"score_spread":0.3349546094247668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413635100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52659297,0.00025334142,0.47242737,0.00020753297,0.000031151227,0.00018587391,4.56123e-7,0.000008811079,0.0002924863],"genre_scores_gemma":[0.64479566,0.000017537639,0.35496622,0.00015979676,0.00000637129,0.000023543014,0.000012692137,0.00000629619,0.000011900581],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907684,0.00036913707,0.00020539267,0.00016649356,0.00003818976,0.0001439592],"domain_scores_gemma":[0.9996434,0.00008399863,0.00005906431,0.0001212373,0.00004235784,0.000049942802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002085205,0.00008233242,0.00021607551,0.00013035882,0.000013030018,0.0000031054144,0.000033516448,0.00013359798,0.000054640677],"category_scores_gemma":[0.00032542623,0.000070994625,0.000041045503,0.00011724472,0.00007940602,0.000027921142,0.00002767178,0.000081438215,0.000002316628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030708576,0.000038291095,0.09453111,0.00003145758,0.000018584074,8.8696805e-7,0.00018917918,0.0000035085554,0.87187225,0.0007358651,0.000004515729,0.032543615],"study_design_scores_gemma":[0.0025292907,0.00047130763,0.46362194,0.000034930665,0.00005742098,0.000012928076,0.00023344593,0.009145003,0.507147,0.016463138,0.00011247773,0.00017112402],"about_ca_topic_score_codex":0.00010822761,"about_ca_topic_score_gemma":0.0000075263706,"teacher_disagreement_score":0.36909083,"about_ca_system_score_codex":0.000009630657,"about_ca_system_score_gemma":0.00001732948,"threshold_uncertainty_score":0.2895077},"labels":[],"label_agreement":null},{"id":"W2413635672","doi":"10.1007/978-1-62703-589-7_22","title":"Commercial Considerations for Immunoproteomics","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Value (mathematics); Plan (archaeology); Field (mathematics); Engineering; Management science; Engineering ethics; Computer science; Engineering management; Geography; Mathematics; Archaeology","score_opus":0.04199142545572134,"score_gpt":0.4086955497650068,"score_spread":0.3667041243092855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413635672","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07087118,0.00035992157,0.92536086,0.001179225,0.00029663483,0.0010168257,0.000027197653,0.000010847483,0.0008773069],"genre_scores_gemma":[0.050078135,0.00013271686,0.947448,0.0014452259,0.00012648413,0.0004038121,0.00015167965,0.000022730243,0.00019117304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827206,0.0004396878,0.00043033637,0.0003132952,0.00007564463,0.00046896594],"domain_scores_gemma":[0.99905074,0.00017599469,0.00007550802,0.00039774476,0.00018982345,0.000110221205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011032207,0.00017019766,0.00023998997,0.00011589942,0.000084704625,0.000037226702,0.00025029047,0.00037461185,0.00008742158],"category_scores_gemma":[0.0023315463,0.00015395829,0.00012429786,0.00009363004,0.0003138517,0.0000031268355,0.00019786946,0.00016591673,0.000020810927],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020863128,0.000048713977,0.000638548,0.00001855196,0.000033490538,5.6988387e-7,0.000037244365,0.000007484243,0.9638468,0.0014177714,0.0010951691,0.032834765],"study_design_scores_gemma":[0.0013442541,0.0007741129,0.0019725077,0.000009060235,0.000012635803,0.000016509543,0.00009858077,0.0010879884,0.91199034,0.053374656,0.028950322,0.00036904734],"about_ca_topic_score_codex":0.0000785025,"about_ca_topic_score_gemma":0.00003502036,"teacher_disagreement_score":0.051956885,"about_ca_system_score_codex":0.000018753295,"about_ca_system_score_gemma":0.0001234056,"threshold_uncertainty_score":0.62782365},"labels":[],"label_agreement":null},{"id":"W2413638706","doi":"10.1007/978-1-61779-445-2_9","title":"New Advances in Amino Acid Profiling by Capillary Electrophoresis-Electrospray Ionization-Mass Spectrometry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Japan Society for the Promotion of Science","keywords":"Chemistry; Chromatography; Electrospray ionization; Derivatization; Amino acid; Capillary electrophoresis; Mass spectrometry; Electrospray; Capillary electrophoresis–mass spectrometry; Tandem mass spectrometry; Metabolite; Analytical Chemistry (journal); Biochemistry","score_opus":0.011327506658455925,"score_gpt":0.32987370704858654,"score_spread":0.3185462003901306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413638706","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008887563,0.01114338,0.95471597,0.000088979454,0.000037271682,0.00020764642,0.000008998129,0.00013868802,0.024771482],"genre_scores_gemma":[0.05660247,0.002106507,0.9406908,0.00010750449,0.00004427474,0.00014692033,0.00008758015,0.00004809935,0.00016581766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774045,0.00026335305,0.00052619114,0.00070204824,0.00010813978,0.00065982],"domain_scores_gemma":[0.99901897,0.00010852153,0.00018197483,0.000547677,0.000040165927,0.00010271088],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00050864107,0.00029919294,0.00043494217,0.00036188905,0.000052204592,0.000015491049,0.000516572,0.00037344624,0.0016645805],"category_scores_gemma":[0.00024710255,0.000306985,0.0000943544,0.0012595989,0.00008036257,0.00006886818,0.00007927615,0.00056478847,0.0000056575295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025156225,0.000075761454,0.009640344,0.000023831726,0.000014993493,0.000013195057,0.000026953,0.0000013471514,0.9433032,0.039764177,0.000040528397,0.007070495],"study_design_scores_gemma":[0.000256838,0.000096246265,0.00008554877,0.000013143938,0.0000108805125,0.000011134298,0.000024682584,0.00007006041,0.89815384,0.098201156,0.002785377,0.0002911169],"about_ca_topic_score_codex":0.000121417936,"about_ca_topic_score_gemma":0.000019252075,"teacher_disagreement_score":0.05843698,"about_ca_system_score_codex":0.00020978427,"about_ca_system_score_gemma":0.00008959584,"threshold_uncertainty_score":0.99993825},"labels":[],"label_agreement":null},{"id":"W2413675855","doi":"10.1007/978-1-4939-1047-2_18","title":"Patch-Clamp Technique in ESC-Derived Cardiomyocytes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; University Health Network; Canada Research Chairs; University of Toronto","funders":"","keywords":"hERG; Dofetilide; Patch clamp; Electrophysiology; Ion channel; Voltage clamp; Neuroscience; Chemistry; Biophysics; Potassium channel; Biology; Medicine; Internal medicine; Receptor; Biochemistry","score_opus":0.011181335837746748,"score_gpt":0.3625665008028572,"score_spread":0.3513851649651104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413675855","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25898933,0.00061216863,0.7366432,0.00042907282,0.00015293404,0.00044545613,0.0000012589026,0.000052047693,0.0026745235],"genre_scores_gemma":[0.42485833,0.00007093975,0.57368755,0.0010125383,0.0000937231,0.0001983991,0.000019335359,0.00002388809,0.000035286605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99663097,0.002148878,0.00031134795,0.00044092585,0.000050154682,0.00041774937],"domain_scores_gemma":[0.99910545,0.0003017122,0.000056773064,0.0004399986,0.00003572951,0.000060322207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015528324,0.00019179175,0.00070447644,0.00029206462,0.000022975506,0.0000029781881,0.00010171106,0.000411097,0.000024224835],"category_scores_gemma":[0.0008327384,0.00017078928,0.00018700525,0.00034989687,0.00019028859,0.000013135322,0.000086665845,0.0005258891,0.000009604534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010909026,0.000032958076,0.0050043124,0.000020464711,0.000034152185,0.00022038039,0.000038694856,0.000025795742,0.96502274,0.002766178,0.0000097873035,0.026715472],"study_design_scores_gemma":[0.001261053,0.0005201507,0.009993159,0.000052522497,0.000034383887,0.00030921283,0.000017400931,0.0002308956,0.9558563,0.02767236,0.0037981938,0.00025433057],"about_ca_topic_score_codex":0.0000927442,"about_ca_topic_score_gemma":0.0000109320845,"teacher_disagreement_score":0.16586898,"about_ca_system_score_codex":0.00006653842,"about_ca_system_score_gemma":0.000056760753,"threshold_uncertainty_score":0.69645846},"labels":[],"label_agreement":null},{"id":"W2413691047","doi":"10.1007/978-1-4939-3136-1_18","title":"Parallel Syntheses of Peptides on Teflon-Patterned Paper Arrays (SyntArrays)","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"","keywords":"Solvophobic; Nanotechnology; Materials science; Combinatorial chemistry; Chemistry; Organic chemistry; Molecule","score_opus":0.04409793102010442,"score_gpt":0.4037946901175422,"score_spread":0.3596967590974378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413691047","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04755693,0.00031675366,0.9491095,0.00036510057,0.0000745663,0.00023870757,0.000015158153,0.000026518235,0.0022967537],"genre_scores_gemma":[0.28295666,0.00006399531,0.71614486,0.00062563457,0.000042557862,0.000049542883,0.000037928377,0.000023240062,0.00005561458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984249,0.00044679176,0.00032559628,0.00046330204,0.00007241661,0.00026698236],"domain_scores_gemma":[0.9990032,0.0000813165,0.00013159517,0.0006174186,0.00008689974,0.000079591206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062887155,0.00020109316,0.00028560942,0.00008861502,0.000024784067,0.000005404168,0.00027850628,0.0002571063,0.0000067393403],"category_scores_gemma":[0.00069756934,0.00017789514,0.00010678705,0.00013598817,0.0002079326,0.0000024343794,0.00013252172,0.00013538159,0.0000036401987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008557427,0.00008572435,0.0006132267,0.0000064885035,0.00002284786,0.0000030952765,0.000022437154,0.00027033518,0.9856296,0.0038015575,0.00011202753,0.0093470905],"study_design_scores_gemma":[0.00026951247,0.00046329983,0.000104155566,0.000027166774,0.000010300874,0.000012657753,0.000052730775,0.000053657852,0.9580513,0.015695563,0.025039246,0.0002203572],"about_ca_topic_score_codex":0.000041564625,"about_ca_topic_score_gemma":0.000016841686,"teacher_disagreement_score":0.23539972,"about_ca_system_score_codex":0.000019961979,"about_ca_system_score_gemma":0.00004653577,"threshold_uncertainty_score":0.7254353},"labels":[],"label_agreement":null},{"id":"W2413691694","doi":"10.1007/978-1-61779-977-8_2","title":"Plastic Embedding and Polishing of Bone for Reflected Light and Electron Microscopy","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Paleopathology and ancient diseases","field":"Arts and Humanities","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Embedding; Electron microscope; Materials science; Polishing; Computer science; Nanotechnology; Physics; Optics; Artificial intelligence; Composite material","score_opus":0.031609121151526115,"score_gpt":0.41909915693338073,"score_spread":0.3874900357818546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413691694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90164727,0.009644658,0.0875302,0.00006780417,0.00026573462,0.0001292902,0.000017744052,0.000015302781,0.0006819859],"genre_scores_gemma":[0.8176238,0.000050145893,0.18194008,0.00018550892,0.00010200206,0.000027425194,0.000010490793,0.00001129842,0.000049221788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991044,0.00028932703,0.00016511367,0.00014810257,0.000017432776,0.00027566147],"domain_scores_gemma":[0.9994796,0.00032182687,0.00006635914,0.00006801393,0.000023794753,0.000040405706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005292676,0.000089787696,0.00021619065,0.00012326747,0.000075596625,0.000011692972,0.00003923303,0.000071145536,0.000010355503],"category_scores_gemma":[0.0004928839,0.00007833628,0.000029280336,0.00002806307,0.00017161894,0.000049884944,0.000033702487,0.00007652899,2.363908e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004904302,0.000035444562,0.006358161,0.000048650825,0.000012520248,0.0000013397507,0.0021561089,3.0047036e-7,0.90151715,0.08908795,0.000013938926,0.00071940495],"study_design_scores_gemma":[0.0019075742,0.00085583393,0.008458414,0.0001509816,0.00019455496,0.00004645764,0.0012501973,0.00030796378,0.8942953,0.05990443,0.032008585,0.00061971217],"about_ca_topic_score_codex":0.000008420805,"about_ca_topic_score_gemma":0.000014223638,"teacher_disagreement_score":0.09440988,"about_ca_system_score_codex":0.0000063525904,"about_ca_system_score_gemma":0.000009963379,"threshold_uncertainty_score":0.31944606},"labels":[],"label_agreement":null},{"id":"W2413802420","doi":"10.1007/978-1-4939-0473-0_51","title":"Assessing Pseudomonas aeruginosa Virulence Using a Nonmammalian Host: Dictyostelium discoideum","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec; Université Laval","funders":"","keywords":"Dictyostelium discoideum; Virulence; Pseudomonas aeruginosa; Amoeba (genus); Microbiology; Biology; Host (biology); Dictyostelium; Bacteria; Genetics; Gene","score_opus":0.024669141484937332,"score_gpt":0.37502393811789464,"score_spread":0.3503547966329573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413802420","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5301134,0.00025629965,0.46834907,0.0001296981,0.00048770072,0.00013229674,0.0000051512093,0.000018254697,0.00050811766],"genre_scores_gemma":[0.44922704,0.000030332989,0.54973435,0.0006346087,0.00023863376,0.0000082749575,0.000050181254,0.00004317092,0.000033402917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960808,0.0017330713,0.00051745836,0.0008703008,0.00009742226,0.0007009439],"domain_scores_gemma":[0.9988152,0.00008005642,0.00020768825,0.0006928903,0.00006891401,0.00013527273],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016576163,0.00036835784,0.00045750866,0.00015588311,0.00012848375,0.00009439371,0.00034728527,0.0005005424,0.000015479734],"category_scores_gemma":[0.0006215349,0.0003531208,0.00017759831,0.000250916,0.00028724805,0.000013894662,0.0003647623,0.0002677612,0.0000055895075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037365655,0.00003775252,0.00301313,0.000015104732,0.000026823725,0.000014557125,0.00002417389,0.00004508708,0.98365456,0.00063352374,0.000007243216,0.012490678],"study_design_scores_gemma":[0.0005557336,0.00021218706,0.001520478,0.000050619245,0.000028220324,0.00009112287,0.000056084154,0.0010620767,0.98757386,0.00036936157,0.007977188,0.00050305243],"about_ca_topic_score_codex":0.00015066874,"about_ca_topic_score_gemma":0.00003329128,"teacher_disagreement_score":0.0813853,"about_ca_system_score_codex":0.000035254416,"about_ca_system_score_gemma":0.00008201854,"threshold_uncertainty_score":0.99989206},"labels":[],"label_agreement":null},{"id":"W2413809379","doi":"10.1007/978-1-61779-818-4_22","title":"Epigenetics, the Role of DNA Methylation in Tree Development","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Reprogramming; Epigenetics; Multicellular organism; Biology; DNA methylation; Organism; Cell biology; Gene; Gene expression; Genetics","score_opus":0.01877248767968877,"score_gpt":0.34064833659796107,"score_spread":0.3218758489182723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413809379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6493584,0.023785513,0.3248072,0.00010932383,0.00020581047,0.00026113284,0.0000033589922,0.0000044297226,0.0014648493],"genre_scores_gemma":[0.7069034,0.00014736575,0.2925125,0.000094951894,0.000083760715,0.000039109134,0.00011730666,0.000011293188,0.00009034855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985559,0.00070837844,0.00028528582,0.00018034135,0.000045499084,0.00022462063],"domain_scores_gemma":[0.99961174,0.000032963508,0.00008329058,0.00021436633,0.000028673825,0.000028994391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010933757,0.000110379624,0.00015329568,0.00006858981,0.000024180614,0.000002711305,0.00015853324,0.00021130465,0.0000062168306],"category_scores_gemma":[0.00017596006,0.000078565725,0.000041231287,0.00012461795,0.0000686966,0.000002116003,0.000072372306,0.00008402237,0.0000017350493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013176765,0.000041726646,0.013324997,0.000003231307,0.00001743503,3.4495895e-7,0.0002507366,0.000052268515,0.91999733,0.0008063434,0.000008494543,0.06548389],"study_design_scores_gemma":[0.00015653548,0.000038503047,0.006944653,0.000004166322,0.0000059535537,0.0000041930903,0.00006462579,0.000028186409,0.9273149,0.0004501481,0.06489402,0.00009415273],"about_ca_topic_score_codex":0.00005473661,"about_ca_topic_score_gemma":0.00042910606,"teacher_disagreement_score":0.06538974,"about_ca_system_score_codex":0.000016587133,"about_ca_system_score_gemma":0.000053733547,"threshold_uncertainty_score":0.32038173},"labels":[],"label_agreement":null},{"id":"W2413856384","doi":"10.1007/978-1-62703-026-7_22","title":"Expressing Full-Length Functional PfEMP1 Proteins in the HEK293 Expression System","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Malaria Research and Control","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Plasmodium falciparum; Heterologous; HEK 293 cells; Heterologous expression; Biology; Cell biology; Membrane protein; Gene; Molecular biology; Biochemistry; Malaria; Recombinant DNA; Immunology; Membrane","score_opus":0.0452746075290371,"score_gpt":0.40475072076994917,"score_spread":0.35947611324091205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413856384","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05555044,0.0023496137,0.93557256,0.0012967276,0.00023435001,0.0010411841,0.0000023976543,0.00003256108,0.0039201574],"genre_scores_gemma":[0.6835885,0.0000075021494,0.31520435,0.0004102207,0.0002258985,0.00046762318,0.000014976193,0.00001545225,0.00006548508],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99508685,0.0035654334,0.00031021188,0.00026843318,0.0002048743,0.0005642135],"domain_scores_gemma":[0.999014,0.0003477146,0.00006625949,0.00042039127,0.000042180916,0.000109409135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041900454,0.00015036302,0.00033212625,0.00021233973,0.0000588924,0.00001359486,0.00017578786,0.00021590394,0.00008240597],"category_scores_gemma":[0.0008868005,0.00009331889,0.00008869972,0.00025335062,0.000089575035,0.00004447427,0.00009040203,0.0005360374,0.000011628678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037347456,0.00014811808,0.004431471,0.000072374714,0.000017332568,0.000055381803,0.00021738249,0.000006827747,0.97414285,0.0092214,0.00004410083,0.011269314],"study_design_scores_gemma":[0.014556902,0.0017806609,0.07990232,0.0012148254,0.00014162832,0.0012509162,0.0051766494,0.0054160976,0.8551095,0.004259165,0.030207098,0.0009842336],"about_ca_topic_score_codex":0.000046076853,"about_ca_topic_score_gemma":0.000003698252,"teacher_disagreement_score":0.62803805,"about_ca_system_score_codex":0.00008986505,"about_ca_system_score_gemma":0.00007597533,"threshold_uncertainty_score":0.3805434},"labels":[],"label_agreement":null},{"id":"W2413863571","doi":"10.1007/978-1-62703-589-7_1","title":"Introduction to the Immune System","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":100,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Ottawa","funders":"","keywords":"Immune system; Biology; Immunology","score_opus":0.010433183106230032,"score_gpt":0.311463103404324,"score_spread":0.30102992029809394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413863571","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010443331,0.003102573,0.960105,0.008975385,0.013253982,0.00069495064,7.965238e-7,0.00010435213,0.0033196113],"genre_scores_gemma":[0.5839804,0.000088480694,0.3609377,0.005377962,0.0011156504,0.0019087264,0.00033045656,0.000121785335,0.046138827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99713475,0.0019166672,0.00034291836,0.00030602643,0.000013251351,0.00028639752],"domain_scores_gemma":[0.9992703,0.00011968079,0.00007865477,0.00044325893,0.00007593107,0.00001213192],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0009891945,0.00013438781,0.00022054579,0.00016853878,0.000100264704,0.000014869899,0.0002291974,0.00021466315,0.0015385792],"category_scores_gemma":[0.0003234428,0.0000922127,0.00008112143,0.0002565389,0.0000780731,0.000040893403,0.000098205084,0.00034804048,0.0036414203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029387193,0.000021017764,0.00005417115,0.000004464648,0.00003809138,5.1363213e-7,0.00008810824,0.000029366933,0.9625853,0.008492284,0.005424783,0.023232544],"study_design_scores_gemma":[0.00021229667,0.00011111862,0.00060536084,0.0000062599433,0.000008309396,0.000064973196,0.00038165264,0.000030004672,0.6177789,0.00013545941,0.38057235,0.00009330183],"about_ca_topic_score_codex":0.00037756193,"about_ca_topic_score_gemma":0.0000044989342,"teacher_disagreement_score":0.5991673,"about_ca_system_score_codex":0.00008033289,"about_ca_system_score_gemma":0.000012707806,"threshold_uncertainty_score":0.99937415},"labels":[],"label_agreement":null},{"id":"W2413887259","doi":"10.1007/978-1-60761-588-0_22","title":"Preventing Tissue Injury Using siRNA","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; London Health Sciences Centre; Lawson Health Research Institute","funders":"","keywords":"RNA interference; Small interfering RNA; Gene silencing; RNA; Oligonucleotide; RNA silencing; Computational biology; Cell biology; Biology; Context (archaeology); Sense (electronics); Chemistry; Gene; Biochemistry","score_opus":0.021797462304677818,"score_gpt":0.4201663585401105,"score_spread":0.39836889623543265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413887259","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.619905,0.00026737334,0.3786091,0.000028938639,0.00045506403,0.00010797713,0.000004395494,0.000008158657,0.00061403617],"genre_scores_gemma":[0.34284773,0.00003259482,0.65630203,0.0003652873,0.0001816974,0.00001805741,0.000031907417,0.000027218637,0.0001934323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832755,0.00047025376,0.00030409658,0.0004835683,0.000048485166,0.00036606038],"domain_scores_gemma":[0.99928105,0.000024048875,0.00009648831,0.0004760413,0.00006030443,0.00006208905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087272533,0.00018826345,0.00021771478,0.00011742484,0.000046470122,0.000015910093,0.00033394565,0.0003945668,0.000062239116],"category_scores_gemma":[0.0003954031,0.00018757395,0.00009227317,0.00014154108,0.00012724604,0.0000031467782,0.00024522282,0.00030660935,0.000008652132],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024378567,0.00003077226,0.0026194418,0.0000059067706,0.000022483326,0.000008079765,0.000015572186,0.000019455294,0.9639156,0.00030208303,0.000027218495,0.033009],"study_design_scores_gemma":[0.00017971202,0.00019561978,0.00021814453,0.0000079447345,0.000010940786,0.00003232615,0.000016526164,0.00018937065,0.9826664,0.0017654777,0.014494467,0.0002230932],"about_ca_topic_score_codex":0.000058314734,"about_ca_topic_score_gemma":0.00004075762,"teacher_disagreement_score":0.27769297,"about_ca_system_score_codex":0.000008491698,"about_ca_system_score_gemma":0.00006168098,"threshold_uncertainty_score":0.7649044},"labels":[],"label_agreement":null},{"id":"W2413890025","doi":"10.1007/978-1-4939-1115-8_11","title":"Computational Prediction of B Cell Epitopes from Antigen Sequences","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Epitope; Computational biology; Antigen; Computer science; Identification (biology); Set (abstract data type); Biology; Immunology; Programming language","score_opus":0.017711580957871675,"score_gpt":0.3179429101813568,"score_spread":0.3002313292234851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413890025","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3807738,0.00045533117,0.6177971,0.000026370773,0.00009179377,0.00007082358,0.000024116489,0.0000040794403,0.0007566081],"genre_scores_gemma":[0.39884913,0.000068001515,0.6006287,0.00009889203,0.000037734844,0.000008672423,0.00028904414,0.000007874914,0.000011964892],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987953,0.00042957606,0.00035082846,0.00022182654,0.00005043574,0.00015208166],"domain_scores_gemma":[0.9994943,0.000057018777,0.00013639597,0.000234654,0.000051705625,0.000025908648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006185291,0.000117947486,0.0002031856,0.00006522976,0.000023977003,0.000006786659,0.00019919295,0.00017686556,0.000012507331],"category_scores_gemma":[0.00014542481,0.0001064739,0.00007214032,0.00008763187,0.000079751146,0.0000030821943,0.00009966598,0.00007573887,0.0000017765892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017052567,0.00003291689,0.009275185,0.000011722587,0.000026031683,2.1135254e-7,0.000050566607,0.0016569995,0.98165613,0.000698929,0.000021184334,0.006553044],"study_design_scores_gemma":[0.0005145782,0.00029271867,0.0073963115,0.000009024827,0.000010281611,0.0000028789495,0.00006268809,0.010784297,0.96530354,0.011497773,0.003995908,0.00012998914],"about_ca_topic_score_codex":0.00006322394,"about_ca_topic_score_gemma":0.0000027206365,"teacher_disagreement_score":0.018075326,"about_ca_system_score_codex":0.000005605135,"about_ca_system_score_gemma":0.000030760504,"threshold_uncertainty_score":0.43418795},"labels":[],"label_agreement":null},{"id":"W2413904235","doi":"10.1007/978-1-62703-161-5_35","title":"Methods to Study Legionella Transcriptome In Vitro and In Vivo","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Microarray; Transcriptome; Virulence; DNA microarray; Legionella; Biology; Legionella pneumophila; Computational biology; Microarray analysis techniques; Gene chip analysis; Gene; Genetics; Gene expression; Bacteria","score_opus":0.036634149999707204,"score_gpt":0.43522548089485863,"score_spread":0.3985913308951514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413904235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7570953,0.002143694,0.23946586,0.00019929094,0.00016013054,0.0005740226,0.0000039318675,0.000006068096,0.00035174564],"genre_scores_gemma":[0.61254483,0.00006960917,0.3867622,0.0003702219,0.000049707745,0.00012159822,0.0000063149155,0.000023708233,0.000051837545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9946086,0.0034800598,0.00043041803,0.0006245064,0.00008731293,0.00076914974],"domain_scores_gemma":[0.9992183,0.000110970395,0.000041535728,0.0004203332,0.00002911187,0.00017979217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004483983,0.0002508539,0.0004320788,0.00046184947,0.00003082074,0.000013578235,0.0003005985,0.00031235814,0.000014102514],"category_scores_gemma":[0.00039846712,0.00023825541,0.00006778279,0.00056430127,0.00011610718,0.000005974469,0.0002710379,0.00031986457,0.0000022469478],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027065404,0.00036081453,0.04432615,0.000010125432,0.00002271477,0.000025335985,0.00056830427,0.000013421778,0.9369844,0.00007463561,0.000009398465,0.017334027],"study_design_scores_gemma":[0.0015038658,0.00031310413,0.009751593,0.0000071837253,0.000007977587,0.000021763277,0.0004686961,0.000043759206,0.9810208,0.00043413404,0.006125101,0.00030203548],"about_ca_topic_score_codex":0.00022661714,"about_ca_topic_score_gemma":0.000083339844,"teacher_disagreement_score":0.14729634,"about_ca_system_score_codex":0.000038409697,"about_ca_system_score_gemma":0.00004004844,"threshold_uncertainty_score":0.97157735},"labels":[],"label_agreement":null},{"id":"W2413926018","doi":"10.1007/978-1-59745-477-3_3","title":"Gene Expression Analyses for Elucidating Mechanisms of Hormonal Action in Plants","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Arabidopsis; Arabidopsis thaliana; Computational biology; Function (biology); Context (archaeology); Biology; Gene; Identification (biology); Transcriptome; Homology (biology); Genetics; Bioinformatics; Gene expression; Botany","score_opus":0.0765642009814487,"score_gpt":0.432772550463196,"score_spread":0.3562083494817473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413926018","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34431306,0.00031496453,0.6550526,0.000008998928,0.00007546305,0.00016071802,0.000016528917,0.0000039731644,0.00005366745],"genre_scores_gemma":[0.50017536,0.00018276216,0.49939746,0.00006342283,0.000018275661,0.000065574815,0.00007258992,0.000012847668,0.000011719636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985846,0.00031430976,0.00035727283,0.00040485998,0.00006319697,0.00027571723],"domain_scores_gemma":[0.9994511,0.00005884216,0.00015743493,0.00024552576,0.0000470949,0.000040017352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000664122,0.00015606963,0.00029623925,0.00015823414,0.000037064634,0.0000022259283,0.00019566696,0.00027178452,0.0000064287556],"category_scores_gemma":[0.0003645433,0.00014534427,0.00010070589,0.00012277409,0.00005809407,0.0000031140885,0.00010257624,0.00009085549,2.67413e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015642088,0.00006692808,0.00008261117,0.000019646905,0.00001716424,0.0000062387503,0.00002827858,0.00011151235,0.99502856,0.0002339495,0.0000027021592,0.0042459746],"study_design_scores_gemma":[0.0006191241,0.00033240375,0.00006681859,0.000019257153,0.0000075287508,0.000038574726,0.000059848022,0.00033581813,0.9866444,0.01155701,0.0001680249,0.00015121227],"about_ca_topic_score_codex":0.00003119295,"about_ca_topic_score_gemma":0.00001285817,"teacher_disagreement_score":0.15586229,"about_ca_system_score_codex":0.000014412457,"about_ca_system_score_gemma":0.000067095374,"threshold_uncertainty_score":0.5926967},"labels":[],"label_agreement":null},{"id":"W2413964346","doi":"10.1007/978-1-60327-483-8_26","title":"Gene Transfer in Avian Embryos Using Replication-Competent Retroviruses","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Replication (statistics); Gene transfer; Gene; Biology; Virology; Genetics; Embryo","score_opus":0.08027653034312236,"score_gpt":0.4352938968258085,"score_spread":0.3550173664826861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413964346","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013384233,0.78366745,0.21393478,0.000009934924,0.00027141807,0.0006506399,0.000020575724,0.000009801953,0.00009697149],"genre_scores_gemma":[0.00006805554,0.7975536,0.20155555,0.000077186196,0.0001996807,0.00011617253,0.0002729033,0.00008116425,0.000075711905],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950234,0.0017859054,0.0009768236,0.0016377943,0.00009212362,0.0004839191],"domain_scores_gemma":[0.9982399,0.000034517587,0.00018888983,0.001391633,0.000066421475,0.0000786349],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008999237,0.00052096427,0.0012381076,0.0003798997,0.00005610977,0.00001181427,0.00046468707,0.0010875289,0.00001020528],"category_scores_gemma":[0.00029627167,0.00047496406,0.00048685717,0.00048031544,0.0002081905,0.0000019351594,0.00017724029,0.00046246275,0.0000052050846],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029029932,0.00011268674,0.0001563021,0.0004996966,0.000118902426,0.000048083937,0.000019576551,0.00004259087,0.600608,0.000118538956,0.000009600985,0.39823702],"study_design_scores_gemma":[0.00035782508,0.0003702973,0.000056235473,0.00048613857,0.00013274544,0.0005907747,0.000008193736,0.000027780981,0.06790129,0.00013646252,0.9291104,0.00082185847],"about_ca_topic_score_codex":0.000070684946,"about_ca_topic_score_gemma":0.00001659685,"teacher_disagreement_score":0.9291008,"about_ca_system_score_codex":0.00009592685,"about_ca_system_score_gemma":0.00029639737,"threshold_uncertainty_score":0.9997702},"labels":[],"label_agreement":null},{"id":"W2413968832","doi":"10.1007/978-1-62703-992-5_22","title":"Measuring Antibody Affinities as Well as the Active Concentration of Antigens Present on a Cell Surface","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amgen (Canada)","funders":"","keywords":"Antibody; Antigen; Affinities; Labelling; Cell; Potency; Molecular biology; Ligand (biochemistry); Chemistry; Biology; Monoclonal antibody; Binding affinities; Receptor; Biochemistry; In vitro; Immunology","score_opus":0.05474966866036951,"score_gpt":0.4299282080672451,"score_spread":0.37517853940687557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413968832","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90001076,0.0005902431,0.03629921,0.0016059405,0.00013582967,0.00043404102,0.000005976228,0.000012094292,0.060905922],"genre_scores_gemma":[0.9393753,0.000375119,0.058303844,0.0007299982,0.00008359851,0.000010964668,0.00003160258,0.000018880392,0.0010707085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970989,0.0018377362,0.00026607196,0.00027377336,0.00021067323,0.00031283466],"domain_scores_gemma":[0.9985517,0.0008869169,0.000098113036,0.00028694022,0.000109802764,0.000066475746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012104857,0.00014941413,0.0003504082,0.00006795397,0.000057530444,0.0000071972363,0.00017126386,0.00012867554,0.00016273564],"category_scores_gemma":[0.00047272875,0.00009725451,0.00011144761,0.00016101639,0.00031178456,0.00001434563,0.000089882094,0.00032770203,0.000056426725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055486255,0.00012424402,0.004126722,0.000060884347,0.00005052462,0.00002362202,0.00033722445,0.0001534815,0.9838319,0.0059378305,0.000022606453,0.0047761155],"study_design_scores_gemma":[0.0005731159,0.0009327882,0.0028475788,0.000051831685,0.000021289527,0.00001853934,0.00018297523,0.0009188998,0.9756042,0.003662973,0.015087087,0.00009873758],"about_ca_topic_score_codex":0.00047823394,"about_ca_topic_score_gemma":0.0000056183417,"teacher_disagreement_score":0.059835214,"about_ca_system_score_codex":0.000026444619,"about_ca_system_score_gemma":0.0000909021,"threshold_uncertainty_score":0.39659238},"labels":[],"label_agreement":null},{"id":"W2413990853","doi":"10.1007/978-1-59745-519-0_8","title":"Use of Inverse Theory Algorithms in the Analysis of Biomembrane NMR Data","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"NMR spectroscopy and applications","field":"Physics and Astronomy","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Moore–Penrose pseudoinverse; Inverse; Inverse problem; Regularization (linguistics); Experimental data; Algorithm; Inverse theory; Computer science; Mathematics; Artificial intelligence; Statistics","score_opus":0.1644506321316294,"score_gpt":0.5526256181231022,"score_spread":0.3881749859914728,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2413990853","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017145087,0.30040342,0.69846755,0.0000066901894,0.000024775069,0.00032983464,0.0004972609,0.0000023133618,0.00025102744],"genre_scores_gemma":[0.000011626785,0.37512982,0.6227047,0.000038112783,0.000035447356,0.00007672552,0.0019637211,0.000020409709,0.000019450135],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99566245,0.0028372072,0.00078231905,0.000434701,0.000066994464,0.00021635654],"domain_scores_gemma":[0.9964118,0.0015518657,0.00046591036,0.0015242978,0.00002466468,0.000021438715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003491096,0.00022346545,0.0014486948,0.0007925414,0.00001582201,0.0000067361734,0.0010805444,0.00018714712,0.00008215314],"category_scores_gemma":[0.000075003205,0.00015267453,0.0003759267,0.0027273658,0.00024306339,0.000024357836,0.00025417656,0.0003565465,0.0000014056969],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003070375,0.00014222978,0.00010807555,0.00021274733,0.00091180636,0.0000020009866,0.00004137195,0.000014466278,0.0007891091,0.06408666,0.0000062865897,0.9336822],"study_design_scores_gemma":[0.00020559374,0.00004507206,0.00004131717,0.00046321208,0.005364954,0.0000013976747,0.00012551098,0.00076111633,0.001698541,0.018626185,0.97225326,0.00041386465],"about_ca_topic_score_codex":0.00042231006,"about_ca_topic_score_gemma":0.000021007441,"teacher_disagreement_score":0.97224694,"about_ca_system_score_codex":0.000014224672,"about_ca_system_score_gemma":0.00008228886,"threshold_uncertainty_score":0.62258863},"labels":[],"label_agreement":null},{"id":"W2414094523","doi":"10.1007/978-1-60327-469-2_30","title":"Regulation of Convergent Extension by Non-canonical Wnt Signaling in the Xenopus Embryo","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wnt/β-catenin signaling in development and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Convergent extension; Xenopus; Gastrulation; Wnt signaling pathway; Cell biology; Extension (predicate logic); Biology; Embryo; Regulator; Genetics; Signal transduction; Embryogenesis; Computer science","score_opus":0.022589372210072765,"score_gpt":0.34375910102509893,"score_spread":0.32116972881502615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414094523","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7638932,0.0018286924,0.23346038,0.00013597004,0.00018981737,0.0002311933,0.0000030920849,0.0000042852243,0.00025338776],"genre_scores_gemma":[0.8732591,0.00026089564,0.12568524,0.00045968423,0.00004465421,0.000052004954,0.00010051908,0.000018166353,0.00011967683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776393,0.0009146618,0.0004824259,0.00042729438,0.00012201872,0.00028968128],"domain_scores_gemma":[0.9993451,0.000078703655,0.00014133031,0.00032936473,0.00007179675,0.000033671204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015188339,0.00017692916,0.000280285,0.00008970143,0.000046323818,0.0000039060797,0.00031602284,0.00029805818,0.000034426637],"category_scores_gemma":[0.00020072321,0.00014048578,0.000096456,0.00024505088,0.00021247154,0.0000024798517,0.000102313476,0.00017323403,0.000001962229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008634735,0.000063833315,0.0038074893,0.00000916962,0.000021273678,0.000009563709,0.00012454645,0.00029605423,0.9939319,0.00012828188,0.00046155372,0.0010600247],"study_design_scores_gemma":[0.0006306861,0.00018862054,0.004344661,0.000019054323,0.000009160815,0.000025168845,0.000049305,0.00014916791,0.9906137,0.0006571674,0.0031298518,0.00018344162],"about_ca_topic_score_codex":0.00005387758,"about_ca_topic_score_gemma":0.000006933649,"teacher_disagreement_score":0.10936598,"about_ca_system_score_codex":0.000027253502,"about_ca_system_score_gemma":0.000112603884,"threshold_uncertainty_score":0.5728844},"labels":[],"label_agreement":null},{"id":"W2414122243","doi":"10.1007/978-1-62703-709-9_3","title":"The Determination of RNA Folding Nearest Neighbor Parameters","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":71,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of General Medical Sciences","keywords":"k-nearest neighbors algorithm; Folding (DSP implementation); Stability (learning theory); Nearest neighbor search; Melting temperature; Set (abstract data type); Sample (material); Best bin first; Computer science; Biological system; Algorithm; Data mining; Physics; Materials science; Artificial intelligence; Thermodynamics; Engineering; Biology; Machine learning","score_opus":0.05276659100947145,"score_gpt":0.415909122684403,"score_spread":0.36314253167493155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414122243","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000026335285,0.6161692,0.38272062,0.00001087124,0.00026710282,0.00061216473,0.000008140834,0.000004588476,0.00018096283],"genre_scores_gemma":[0.0000054146813,0.614836,0.38460395,0.000025969957,0.000039753868,0.0003252985,0.000044979435,0.000042659252,0.000075993354],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947543,0.003352521,0.00080309826,0.0005844125,0.000090398884,0.00041525878],"domain_scores_gemma":[0.99793637,0.00050460844,0.0005938197,0.000836733,0.00006994064,0.00005853566],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019037274,0.00040606162,0.0010102751,0.00015088911,0.00007408946,0.000030096273,0.0007592783,0.0008573288,0.000011921495],"category_scores_gemma":[0.0012992192,0.0002771734,0.00050840026,0.00021548018,0.00021157869,0.000002309426,0.0002773394,0.00024759452,0.0000068016225],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000054020948,0.000011296337,0.0000011693841,0.00038082708,0.00005745992,0.000002605666,0.000003931666,5.603951e-7,0.19523121,0.00062483246,0.000008030371,0.8036727],"study_design_scores_gemma":[0.00013090766,0.00025244188,4.314642e-7,0.00064857275,0.00015002306,0.000021743306,0.000010834558,0.000018814182,0.2436828,0.002897233,0.7518069,0.00037926272],"about_ca_topic_score_codex":0.000025647494,"about_ca_topic_score_gemma":0.0000055181235,"teacher_disagreement_score":0.8032934,"about_ca_system_score_codex":0.00002928132,"about_ca_system_score_gemma":0.00012773149,"threshold_uncertainty_score":0.99996805},"labels":[],"label_agreement":null},{"id":"W2414242907","doi":"10.1007/978-1-62703-487-6_6","title":"Molecular Dynamics Simulations of Membrane Proteins","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Molecular dynamics; Microsecond; Biological system; Computer science; Dynamics (music); Statistical physics; Chemistry; Physics; Biology; Computational chemistry","score_opus":0.011847145316005602,"score_gpt":0.3500516168829164,"score_spread":0.3382044715669108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414242907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58446944,0.00012686396,0.4139055,0.00011306,0.00013794113,0.000531399,0.000024233088,0.000010961733,0.00068061653],"genre_scores_gemma":[0.6442055,0.000011141193,0.35514978,0.0002104997,0.000036516987,0.000080192585,0.00018340118,0.000030797728,0.000092163194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979351,0.0006461903,0.00046801477,0.00048703226,0.000091877664,0.00037177568],"domain_scores_gemma":[0.9989443,0.000041470885,0.00014795866,0.0006372029,0.00014719195,0.000081913306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003388094,0.00024757817,0.00036257217,0.00016469955,0.000030402458,0.000010656515,0.00034602426,0.00040103038,0.000108729175],"category_scores_gemma":[0.00033552237,0.00022857379,0.00016179959,0.00027119534,0.00020418213,0.0000048101274,0.00017647164,0.00018482209,0.000004695572],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016221524,0.00006872677,0.0018729632,0.0000264175,0.00004026437,0.0000042795186,0.000021591417,0.000651131,0.9881578,0.002072275,0.0000036442282,0.0070646745],"study_design_scores_gemma":[0.0005193759,0.00021423826,0.0005102048,0.000009738844,0.000028215829,0.000012781455,0.000024340581,0.00093979965,0.9950355,0.0017763422,0.0006807172,0.0002487336],"about_ca_topic_score_codex":0.00012893247,"about_ca_topic_score_gemma":0.000039879902,"teacher_disagreement_score":0.059736095,"about_ca_system_score_codex":0.000028198401,"about_ca_system_score_gemma":0.00010251365,"threshold_uncertainty_score":0.93209684},"labels":[],"label_agreement":null},{"id":"W2414325687","doi":"10.1007/978-1-59745-540-4_7","title":"Chemogenomic Approaches to Elucidation of Gene Function and Genetic Pathways","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Computational biology; Genome; Gene; Genetics; DNA microarray; Barcode; Yeast; Microarray; Mutant; Gene expression","score_opus":0.06745418956875732,"score_gpt":0.34381538542346757,"score_spread":0.27636119585471025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414325687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5177678,0.0010796485,0.48057428,0.00010466471,0.000036107387,0.0001684039,0.000004871699,0.0000032020992,0.00026102105],"genre_scores_gemma":[0.57109034,0.000058622405,0.4285394,0.00018384328,0.000040513798,0.000017437329,0.00003775933,0.000009926378,0.000022158285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862504,0.00037369443,0.0002528361,0.00043315813,0.000063269115,0.00025199188],"domain_scores_gemma":[0.99950224,0.000016295206,0.000054100226,0.00030689998,0.00003932627,0.00008112985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046921917,0.00014027783,0.0001941593,0.00014253972,0.000024267758,0.000007391936,0.00015831289,0.00020038534,0.000005947271],"category_scores_gemma":[0.00013737401,0.00013665864,0.000051296578,0.00017439228,0.00007060647,0.0000012762777,0.00009329277,0.000087585344,0.0000021325422],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010784415,0.000045445115,0.0013038312,0.0000090955655,0.000015772384,0.0000021254957,0.000025569416,0.0002671574,0.9259811,0.00050706835,0.0000064644446,0.07172853],"study_design_scores_gemma":[0.00034007968,0.0009311519,0.018470645,0.000004015427,0.000008991362,0.000016752809,0.000015894282,0.0002336041,0.9755865,0.0037190346,0.00052962365,0.00014370654],"about_ca_topic_score_codex":0.0000070227866,"about_ca_topic_score_gemma":0.0000033907045,"teacher_disagreement_score":0.07158482,"about_ca_system_score_codex":0.000011408795,"about_ca_system_score_gemma":0.00003901362,"threshold_uncertainty_score":0.55727774},"labels":[],"label_agreement":null},{"id":"W2414345519","doi":"10.1007/7651_2016_329","title":"In Vitro Culture of Human Hematopoietic Stem Cells in Serum Free Medium and Their Monitoring by Flow Cytometry","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Héma-Québec","funders":"","keywords":"Leukoreduction; Stem cell; Haematopoiesis; Flow cytometry; CD34; In vitro; Biology; Immunology; Cell biology; Platelet; Biochemistry","score_opus":0.01904375367379678,"score_gpt":0.3513217125686594,"score_spread":0.3322779588948626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414345519","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7866526,0.0016943163,0.21046616,0.00033321223,0.00022307482,0.00042075646,0.000045439887,0.00001760905,0.00014681606],"genre_scores_gemma":[0.7954052,0.0001979328,0.20414993,0.00007155662,0.000027604628,0.000039051407,0.0000064364435,0.00002907386,0.000073200135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978215,0.0008257153,0.0005479381,0.00038476635,0.00009706186,0.00032298875],"domain_scores_gemma":[0.999066,0.00036392573,0.000097397424,0.00036722762,0.000031656615,0.000073780924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012426497,0.00020612484,0.00064018735,0.00036805272,0.000011978667,0.0000031038653,0.00016645069,0.00035082747,0.000016223472],"category_scores_gemma":[0.000086837856,0.0001393365,0.000056164383,0.00037207996,0.0001183431,0.000030562976,0.000064759195,0.00023741048,0.0000012798201],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005584094,0.000068650166,0.022020483,0.00025951868,0.000019503248,0.00006440113,0.0015155548,5.896885e-7,0.9727234,0.000045235258,0.000007412479,0.0032193663],"study_design_scores_gemma":[0.002420103,0.00013075392,0.0013957989,0.00038878567,0.00001528644,0.00004330409,0.00051997433,0.000019901161,0.9932054,0.0016669385,0.00005649986,0.00013720327],"about_ca_topic_score_codex":0.000028888213,"about_ca_topic_score_gemma":0.0000047429457,"teacher_disagreement_score":0.020624686,"about_ca_system_score_codex":0.0000715657,"about_ca_system_score_gemma":0.000027536516,"threshold_uncertainty_score":0.5681977},"labels":[],"label_agreement":null},{"id":"W2414385826","doi":"10.1007/978-1-60327-159-2_19","title":"Inferring Ancestral Protein Interaction Networks","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation","funders":"","keywords":"Budding yeast; Computational biology; Yeast; Protein Interaction Networks; Biology; Genomics; Protein–protein interaction; Genome; Tandem affinity purification; Interaction network; Core (optical fiber); Comparative genomics; DNA sequencing; Saccharomyces cerevisiae; Genetics; Computer science; Gene","score_opus":0.047441296554173944,"score_gpt":0.42535705619376013,"score_spread":0.3779157596395862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414385826","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009007517,0.5448491,0.4537173,0.000003424107,0.00034534407,0.00047389627,0.0000056872386,0.000010613757,0.00058565376],"genre_scores_gemma":[0.000012207446,0.7801557,0.21863014,0.00008542257,0.00031243928,0.00022276014,0.00042076013,0.000062317114,0.00009821645],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99652016,0.0011641611,0.0009731999,0.00067469146,0.00006191055,0.0006058811],"domain_scores_gemma":[0.99863774,0.000054157612,0.00048357894,0.00068549166,0.000040354756,0.000098653654],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0006676342,0.0005710573,0.0012343549,0.00021855514,0.00006417068,0.00002518008,0.00051972386,0.0013958847,0.00001298186],"category_scores_gemma":[0.00014373288,0.00051469624,0.0005317599,0.00028231044,0.00016663517,0.000003990104,0.00037560926,0.0008527666,0.000009199682],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001290145,0.000030760788,0.0000071292366,0.0005308356,0.00013885794,0.000020198928,0.0000089656005,0.00025306924,0.0014435815,0.00047282162,0.00009717257,0.9969837],"study_design_scores_gemma":[0.00021625032,0.0001835182,9.308102e-7,0.0010489811,0.00005488326,0.00022154168,0.000004889769,0.00044760987,0.0003414688,0.0004900252,0.9963995,0.0005904026],"about_ca_topic_score_codex":0.000017143424,"about_ca_topic_score_gemma":0.000012450747,"teacher_disagreement_score":0.9963933,"about_ca_system_score_codex":0.000069319205,"about_ca_system_score_gemma":0.00018425778,"threshold_uncertainty_score":0.9999005},"labels":[],"label_agreement":null},{"id":"W2414391535","doi":"10.1007/978-1-61779-442-1_24","title":"Analysis of Rho GTPase Activation in Saccharomyces cerevisiae","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"GTPase; Effector; Saccharomyces cerevisiae; GTP'; Cell biology; Yeast; Chemistry; Downstream (manufacturing); Biophysics; Biochemistry; Biology; Enzyme; Engineering","score_opus":0.045759364022022055,"score_gpt":0.4119581048179946,"score_spread":0.36619874079597253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414391535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79548687,0.0005708319,0.20210582,0.00002934321,0.000041206797,0.00015157709,0.000008926907,0.0000033137592,0.001602105],"genre_scores_gemma":[0.8001996,0.00012662243,0.1994206,0.00007963119,0.000014078273,0.000030028901,0.000073371506,0.0000123609125,0.000043665263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798733,0.000895964,0.0003584485,0.00040826364,0.00007360187,0.00027640566],"domain_scores_gemma":[0.9993416,0.000044092554,0.00009653122,0.00039780594,0.00007045272,0.00004949087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009726717,0.00013824967,0.00033495857,0.00056665944,0.0000129226455,0.0000035539917,0.0002830646,0.0002433639,0.000100581885],"category_scores_gemma":[0.00035109906,0.00012952715,0.00014329026,0.0009120806,0.00011939119,0.0000020915782,0.00016860479,0.00013670589,0.0000016721307],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009639741,0.00009779884,0.060301624,0.000013388734,0.00016806745,0.000003408626,0.00008694885,0.000086145286,0.928812,0.00038213408,0.0000030811048,0.009948987],"study_design_scores_gemma":[0.00030449044,0.00022050722,0.028303651,0.000008473124,0.000042716816,8.151693e-7,0.00004825785,0.0003254566,0.9694184,0.0008513647,0.00033865633,0.00013722632],"about_ca_topic_score_codex":0.00023094,"about_ca_topic_score_gemma":0.0000934043,"teacher_disagreement_score":0.04060637,"about_ca_system_score_codex":0.000014715096,"about_ca_system_score_gemma":0.000047228226,"threshold_uncertainty_score":0.5281964},"labels":[],"label_agreement":null},{"id":"W2414413319","doi":"10.1007/978-1-4939-2877-4_18","title":"Aggregate and Heatmap Representations of Genome-Wide Localization Data Using VAP, a Versatile Aggregate Profiler","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Montréal; Montreal Clinical Research Institute; Université de Sherbrooke","funders":"","keywords":"Aggregate (composite); Computer science; Materials science; Nanotechnology","score_opus":0.08646117715299638,"score_gpt":0.42417830925507083,"score_spread":0.33771713210207444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414413319","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12855247,0.0027693314,0.8678829,0.0001233175,0.0001395463,0.00025061303,0.000027599848,0.0000074356717,0.0002467958],"genre_scores_gemma":[0.3049367,0.0004170296,0.69304645,0.00037035186,0.00006896389,0.000046482273,0.00095188944,0.000036528123,0.00012557683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808276,0.00079028954,0.00032543525,0.000539072,0.000077388206,0.00018504674],"domain_scores_gemma":[0.99878514,0.000029580897,0.00019046258,0.0007882007,0.000122043064,0.000084561725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008178707,0.00013512876,0.00020277352,0.00013072534,0.00003389948,0.000010853207,0.0002684639,0.00018562758,0.000008695151],"category_scores_gemma":[0.0007144142,0.00013147474,0.000032090535,0.00024634346,0.00016658098,0.0000080796535,0.00035337123,0.000075935866,8.1473763e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006414525,0.000033739896,0.013674849,0.000016129252,0.000031041687,0.0000021300398,0.00010544105,0.001072667,0.9815846,0.00013077044,0.00013861031,0.0031458621],"study_design_scores_gemma":[0.001333701,0.00020335261,0.001552228,0.00003773682,0.000046624387,0.0000182173,0.00034534791,0.015775518,0.95570195,0.0022617965,0.022440037,0.00028346552],"about_ca_topic_score_codex":0.000070232585,"about_ca_topic_score_gemma":0.000012828282,"teacher_disagreement_score":0.17638424,"about_ca_system_score_codex":0.000021721467,"about_ca_system_score_gemma":0.00013788776,"threshold_uncertainty_score":0.5361384},"labels":[],"label_agreement":null},{"id":"W2414419977","doi":"10.1007/978-1-61779-555-8_4","title":"Identifying Cryptic Relationships","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Genome-wide association study; Population stratification; Biology; Species complex; Computational biology; Genetic association; Population; Genetics; Single-nucleotide polymorphism; Genotype; Gene; Demography; Phylogenetic tree","score_opus":0.10998539437505081,"score_gpt":0.4144777163008773,"score_spread":0.30449232192582654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414419977","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18085964,0.0007933791,0.8120365,0.000062809,0.00024462678,0.00013665698,0.0000025002116,0.000013772152,0.005850073],"genre_scores_gemma":[0.27932796,0.000068129375,0.7200158,0.00027111178,0.000040639465,0.00004636428,0.000039832918,0.000018526749,0.0001716392],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966695,0.0020541572,0.00040387383,0.00045509997,0.00003855774,0.00037886543],"domain_scores_gemma":[0.9992326,0.00008486208,0.00013000949,0.00043105544,0.000054803728,0.00006666597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002154216,0.0001617521,0.00023955523,0.00013877267,0.00007716511,0.0000054080983,0.0002568178,0.00040816324,0.000077575234],"category_scores_gemma":[0.0015431241,0.000163312,0.00011114087,0.00019599847,0.00012573898,0.0000020300454,0.00015937258,0.00023609231,0.000028146713],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020858648,0.000056986988,0.19049597,0.000005922354,0.00005534285,0.000006933198,0.00021140114,0.00002388692,0.79786336,0.0066070943,0.000086049855,0.0045661945],"study_design_scores_gemma":[0.0014964008,0.0006542085,0.40413278,0.000024627398,0.00008570574,0.00007032742,0.0007756848,0.0003391437,0.357371,0.22318959,0.0108187,0.0010418041],"about_ca_topic_score_codex":0.000057191777,"about_ca_topic_score_gemma":0.000032646116,"teacher_disagreement_score":0.44049233,"about_ca_system_score_codex":0.000021120843,"about_ca_system_score_gemma":0.000044238226,"threshold_uncertainty_score":0.665967},"labels":[],"label_agreement":null},{"id":"W2414445529","doi":"10.1007/978-1-62703-113-4_18","title":"Preparative Separation of Ribonucleoside Monophosphates by Ion-Pair Reverse-Phase HPLC","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Ribonucleoside; Nucleoside; Chemistry; Nucleotide; High-performance liquid chromatography; RNA; Nuclear magnetic resonance spectroscopy; Chromatography; Biochemistry; Stereochemistry","score_opus":0.01800843897142342,"score_gpt":0.4068038348105959,"score_spread":0.3887953958391725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414445529","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32923213,0.0038749157,0.6655224,0.00007915519,0.00023468032,0.0003559562,0.000030985375,0.00001181758,0.00065795],"genre_scores_gemma":[0.3390505,0.00017578178,0.6595977,0.00033415252,0.00008993907,0.00013964703,0.00017559614,0.00003599573,0.000400675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741733,0.0013464185,0.00040953443,0.00037729403,0.00007279266,0.0003766208],"domain_scores_gemma":[0.9991331,0.000078805424,0.00021242903,0.00042266882,0.000063549975,0.00008946517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014237686,0.00021795866,0.0003315632,0.000075818294,0.00003788246,0.0000060253765,0.00021576897,0.0003630591,0.000050822542],"category_scores_gemma":[0.00045179564,0.00020723818,0.00012498241,0.00015110002,0.00012355224,0.000007884388,0.00010341362,0.00009776274,0.000007276835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015463198,0.00017853847,0.0009948384,0.000012413897,0.00005561928,0.0000011109336,0.00010118493,0.000011755554,0.9877845,0.001547825,0.0005936393,0.008563938],"study_design_scores_gemma":[0.00057064905,0.00049994874,0.00005118924,0.000011222983,0.000020500249,0.000006286433,0.00004611784,0.000053096686,0.9677506,0.001964992,0.028811414,0.00021397017],"about_ca_topic_score_codex":0.000040946827,"about_ca_topic_score_gemma":0.0000020183143,"teacher_disagreement_score":0.028217774,"about_ca_system_score_codex":0.000018235834,"about_ca_system_score_gemma":0.00003589415,"threshold_uncertainty_score":0.8450928},"labels":[],"label_agreement":null},{"id":"W2414463010","doi":"10.1007/978-1-62703-580-4_5","title":"Bioinformatic Tools in Arabidopsis Research","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome Canada","funders":"","keywords":"Arabidopsis; Computational biology; Proteome; Genome; Computer science; Resource (disambiguation); Biology; Data science; Gene; Bioinformatics; Genetics","score_opus":0.12020459509325858,"score_gpt":0.4405368909878623,"score_spread":0.3203322958946037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414463010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9873144,0.00042612696,0.003939604,0.0022333919,0.00008469991,0.0008398522,0.0000133312,0.000034850156,0.0051137605],"genre_scores_gemma":[0.6644037,0.00021382167,0.3325093,0.0013125638,0.0000876794,0.0009195489,0.00023629185,0.000005604986,0.00031151448],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9936562,0.0042402344,0.00046623536,0.00047486834,0.00017811036,0.000984343],"domain_scores_gemma":[0.9978009,0.0017501875,0.00005412043,0.00017064504,0.00010989203,0.000114269445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004898045,0.00017773174,0.0003567257,0.00020985465,0.00007623441,0.0000653566,0.00073763484,0.0004038943,0.0005715705],"category_scores_gemma":[0.0019712513,0.0000766081,0.00008419481,0.001496986,0.00031591897,0.00010286647,0.00037879616,0.00072842155,0.0003274473],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009904796,0.000047078698,0.01487238,0.000004736369,0.0000059350227,0.000026180682,0.000029943616,0.0000026295986,0.8201194,0.0009743347,0.00006960173,0.1638379],"study_design_scores_gemma":[0.0012818343,0.0016565102,0.42508224,0.00013436383,0.000007801834,0.0001489946,0.0011435734,0.0028138438,0.42117566,0.12024794,0.024986114,0.0013211379],"about_ca_topic_score_codex":0.0011044309,"about_ca_topic_score_gemma":0.00038885514,"teacher_disagreement_score":0.41020983,"about_ca_system_score_codex":0.000074413656,"about_ca_system_score_gemma":0.00002426277,"threshold_uncertainty_score":0.6258296},"labels":[],"label_agreement":null},{"id":"W2414467383","doi":"10.1007/978-1-60761-849-2_17","title":"Protocols of In Vitro Protein Covalent Binding Studies in Liver","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pharmacogenetics and Drug Metabolism","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Merck Canada Inc. (Canada)","funders":"","keywords":"Biochemistry; Covalent bond; Enzyme; Cytochrome P450; Chemistry; In vitro; Drug; Xenobiotic; Drug metabolism; Covalent binding; Microsome; Adduct; Reactive intermediate; Pharmacology; Electrophile; Small molecule; Biology","score_opus":0.249336558853156,"score_gpt":0.5976320094254666,"score_spread":0.3482954505723106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414467383","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.983334,0.002881479,0.005282772,0.00014422605,0.00074654276,0.007127394,0.000026197167,0.00001684901,0.000440523],"genre_scores_gemma":[0.48896256,0.00048804565,0.49900776,0.00068763585,0.00010384236,0.010598438,0.000011933415,0.000045468307,0.00009431318],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99446,0.003732524,0.00073917187,0.00044276105,0.00008004355,0.0005454893],"domain_scores_gemma":[0.99890476,0.0004828137,0.0002026123,0.0002526995,0.00007262586,0.0000844984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0053150808,0.0002459456,0.0006625636,0.00059422303,0.00003053362,0.0000035577827,0.00039091034,0.0004887493,0.00012105497],"category_scores_gemma":[0.00082719384,0.0002314955,0.000093824805,0.0005571938,0.00046724497,0.000028040055,0.00024566485,0.001393781,0.000007725129],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003201838,0.00035661872,0.008181023,0.0001128346,0.000051756764,0.00013325168,0.0006105258,0.0000869036,0.9306544,0.0016846968,0.000005181915,0.057802588],"study_design_scores_gemma":[0.0022768658,0.00007207814,0.0006839875,0.000033101456,0.0000197517,0.000009598411,0.00006631858,0.0008876073,0.9729664,0.004129973,0.018634807,0.00021955323],"about_ca_topic_score_codex":0.000038665054,"about_ca_topic_score_gemma":0.000048120848,"teacher_disagreement_score":0.49437147,"about_ca_system_score_codex":0.000047104146,"about_ca_system_score_gemma":0.00009056372,"threshold_uncertainty_score":0.9440113},"labels":[],"label_agreement":null},{"id":"W2414501453","doi":"10.1007/978-1-59745-477-3_2","title":"Visualizing Auxin Transport Routes in Arabidopsis Leaf Primordia","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Auxin; Arabidopsis; Polar auxin transport; Cell biology; Primordium; Biology; Plant hormone; Chemistry; Mutant; Gene; Genetics","score_opus":0.056475834836708025,"score_gpt":0.3836722521659146,"score_spread":0.32719641732920657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414501453","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9833029,0.00081237464,0.013680879,0.00058894296,0.00010274415,0.00032235845,0.000020484084,0.0000516932,0.0011176516],"genre_scores_gemma":[0.8872795,0.00024528912,0.11130354,0.0006928507,0.000060632836,0.000097504235,0.00018735198,0.000004550117,0.00012876905],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9958548,0.002119571,0.00046617052,0.0006854832,0.00012774259,0.0007462294],"domain_scores_gemma":[0.999124,0.000520139,0.00007713703,0.00013731844,0.000038462465,0.0001029241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017501597,0.00024781804,0.00050129497,0.000119617456,0.00009079552,0.000007180789,0.0005276352,0.0004294988,0.000120577846],"category_scores_gemma":[0.00042133874,0.00011967506,0.00015223521,0.0009011973,0.00029643628,0.00004007049,0.000120966324,0.0004648886,0.00002041544],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038673013,0.00007982779,0.20129289,0.0000032716546,0.000011485813,0.00045267656,0.000059951955,0.000009084366,0.782793,0.0004441726,0.000008518248,0.014806441],"study_design_scores_gemma":[0.0007690345,0.00055840914,0.59133565,0.00004023218,0.000011310212,0.00037729682,0.0001268332,0.00024553481,0.3929314,0.0039224,0.008939234,0.000742666],"about_ca_topic_score_codex":0.00081223325,"about_ca_topic_score_gemma":0.00084731815,"teacher_disagreement_score":0.39004278,"about_ca_system_score_codex":0.000056118774,"about_ca_system_score_gemma":0.000034429377,"threshold_uncertainty_score":0.48802075},"labels":[],"label_agreement":null},{"id":"W2414569285","doi":"10.1007/978-1-59745-514-5_11","title":"Organizing and Updating Whole Genome BLAST Searches with ReHAB","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Genome; Similarity (geometry); Computer science; Genomics; Sequence (biology); Data mining; Software; Multiple sequence alignment; Resource (disambiguation); Sequence alignment; Information retrieval; Computational biology; Biology; Artificial intelligence; Genetics; Gene; Programming language","score_opus":0.018760810959363154,"score_gpt":0.33965024728260135,"score_spread":0.3208894363232382,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414569285","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65741205,0.0021867098,0.33930445,0.00009802479,0.000040497318,0.00012953556,0.0000061711453,0.000003853875,0.0008186834],"genre_scores_gemma":[0.44248948,0.0001006,0.5570003,0.00024424243,0.00006088373,0.000008239134,0.000021327798,0.000026529257,0.00004842274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985507,0.00027076103,0.00023715488,0.00047616079,0.000049304796,0.00041588294],"domain_scores_gemma":[0.99945027,0.00007098318,0.000070030575,0.0002754412,0.00005968496,0.000073568954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014500654,0.00018594488,0.00022653231,0.000097264645,0.00007809277,0.000014411126,0.00015709973,0.0001683731,0.000003882227],"category_scores_gemma":[0.00019743215,0.00016227755,0.00003421897,0.00016626483,0.00022855945,6.2465176e-7,0.0002837663,0.00014209686,0.000001452698],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004591319,0.000017034501,0.019916495,0.000010376444,0.00005289486,0.000012716257,0.00011322798,0.000022491913,0.9711819,0.00039327022,0.0000026190976,0.00823103],"study_design_scores_gemma":[0.0008633807,0.00078610395,0.034789704,0.000014054153,0.000023305374,0.00008210372,0.0007551493,0.000020967747,0.93667555,0.0011819069,0.024368599,0.00043918716],"about_ca_topic_score_codex":0.000024627687,"about_ca_topic_score_gemma":0.00006948227,"teacher_disagreement_score":0.21769583,"about_ca_system_score_codex":0.00001452134,"about_ca_system_score_gemma":0.00003561568,"threshold_uncertainty_score":0.6617486},"labels":[],"label_agreement":null},{"id":"W2414580205","doi":"10.1007/978-1-60327-299-5_26","title":"Identification of Cellular MMP Substrates Using Quantitative Proteomics: Isotope-Coded Affinity Tags (ICAT) and Isobaric Tags for Relative and Absolute Quantification (iTRAQ)","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Protease; Isobaric labeling; Proteolysis; Quantitative proteomics; Chemistry; Proteomics; Tandem mass tag; Biochemistry; Stable isotope labeling by amino acids in cell culture; Proteolytic enzymes; Label-free quantification; Tandem mass spectrometry; Computational biology; Biology; Mass spectrometry; Enzyme; Chromatography; Gene","score_opus":0.03423787170855935,"score_gpt":0.3721042396101885,"score_spread":0.33786636790162916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414580205","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48267207,0.00071394164,0.51579666,0.000041720745,0.0000910682,0.00063384627,0.00003401266,0.0000051506277,0.000011527948],"genre_scores_gemma":[0.5179237,0.000060750663,0.48173416,0.000034302248,0.000025133984,0.00011788187,0.000075445125,0.000019575913,0.000009027554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980058,0.0005216468,0.0005445708,0.0006201291,0.00005648414,0.0002513424],"domain_scores_gemma":[0.9988941,0.00010534876,0.00038941298,0.00036666327,0.00018307865,0.000061402985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017954062,0.00021431636,0.00031368848,0.0001404643,0.00009176501,0.000023212773,0.00016790394,0.0004378366,0.0000027264236],"category_scores_gemma":[0.00083708944,0.00021551803,0.00008057427,0.00015167605,0.00031492102,0.000016783064,0.00009662897,0.00021897651,5.2221947e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001269516,0.000056803052,0.00028790894,0.000046241043,0.000054097014,6.992943e-7,0.00013263829,0.000010202133,0.9781168,0.020587957,0.000002180916,0.0005775225],"study_design_scores_gemma":[0.00053935347,0.00032326885,0.00026630808,0.000013794732,0.00005010322,0.0000071542704,0.000078542376,0.0047643827,0.97051054,0.023138134,0.00008348277,0.00022491964],"about_ca_topic_score_codex":0.000055381108,"about_ca_topic_score_gemma":0.000028868495,"teacher_disagreement_score":0.03525165,"about_ca_system_score_codex":0.00001007556,"about_ca_system_score_gemma":0.0000699693,"threshold_uncertainty_score":0.878857},"labels":[],"label_agreement":null},{"id":"W2414592573","doi":"10.1007/978-1-61779-564-0_19","title":"Leading a Successful iGEM Team","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Energy","funders":"","keywords":"Agile software development; Context (archaeology); Engineering management; Computer science; Knowledge management; Engineering ethics; Engineering; Software engineering; Biology","score_opus":0.0168936398056432,"score_gpt":0.37020257329065276,"score_spread":0.3533089334850096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414592573","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.445933,0.005199979,0.54543036,0.000058320813,0.0002906648,0.00013367875,0.0000022601632,0.000017442248,0.0029343066],"genre_scores_gemma":[0.59854466,0.00008517561,0.40024376,0.00038143492,0.00028203567,0.000043539945,0.000054651737,0.000038570608,0.00032620647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99706435,0.0013088773,0.0003497459,0.00048113204,0.000076967444,0.00071892113],"domain_scores_gemma":[0.99903005,0.000043854292,0.00011141565,0.0006220771,0.00004616241,0.00014642626],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017356982,0.00024999748,0.0003580018,0.00018025454,0.00005434305,0.000011614963,0.00034664397,0.00038364023,0.00004837873],"category_scores_gemma":[0.0002612145,0.00024525804,0.00020382862,0.00036802352,0.00014395859,0.0000041090184,0.00025849784,0.00017898352,0.000024657369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016678296,0.000055216664,0.085634865,0.0000070676547,0.00008575825,0.0000021470457,0.000033806504,0.0003126182,0.9025529,0.0006516316,0.00021298918,0.010434315],"study_design_scores_gemma":[0.00040699588,0.00012197883,0.0025501314,0.000008101309,0.00005633729,0.000030391344,0.00006791669,0.0003120764,0.91363853,0.00076033286,0.081612796,0.00043443282],"about_ca_topic_score_codex":0.000017786148,"about_ca_topic_score_gemma":0.000015976759,"teacher_disagreement_score":0.15261163,"about_ca_system_score_codex":0.000035061043,"about_ca_system_score_gemma":0.00003885224,"threshold_uncertainty_score":0.99999994},"labels":[],"label_agreement":null},{"id":"W2414692392","doi":"10.1007/978-1-59745-396-7_20","title":"Large-Scale Phagosome Preparation","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Phagosome; Phagocytosis; Biology; Cell biology; Computational biology; Microbiology; Nanotechnology; Materials science","score_opus":0.012466798783348441,"score_gpt":0.35919539761304203,"score_spread":0.3467285988296936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414692392","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20556384,0.00095558877,0.7910992,0.0001275457,0.00012716201,0.00016704868,0.0000051831175,0.000016303326,0.0019381436],"genre_scores_gemma":[0.47376168,0.00017650801,0.522084,0.0012545639,0.00015799626,0.000031054424,0.0020826221,0.000024180394,0.0004274107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848485,0.00040614698,0.00027581982,0.00045268305,0.000057032637,0.00032348494],"domain_scores_gemma":[0.99947006,0.000009259193,0.000061583974,0.00036371325,0.000038259826,0.000057139074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007320433,0.00016407797,0.00019845416,0.00009021722,0.00003911881,0.000009185013,0.00016980185,0.00031343134,0.00004207278],"category_scores_gemma":[0.000062055886,0.0001655621,0.0001173867,0.00015144584,0.000046511792,0.0000029675155,0.000028288949,0.0001228755,0.000005919012],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008715151,0.00008432219,0.0014734991,0.000003351393,0.000010535617,0.000006988475,0.000093740164,0.000051988314,0.9932483,0.0013602877,0.000015067515,0.0035647985],"study_design_scores_gemma":[0.0007894437,0.0006131671,0.0022395628,0.000005964481,0.00001508291,0.000014738117,0.000041958185,0.00044134355,0.9221293,0.006828511,0.0666092,0.00027176208],"about_ca_topic_score_codex":0.0000042444562,"about_ca_topic_score_gemma":0.000027095355,"teacher_disagreement_score":0.2690152,"about_ca_system_score_codex":0.000013463207,"about_ca_system_score_gemma":0.00003071496,"threshold_uncertainty_score":0.67514265},"labels":[],"label_agreement":null},{"id":"W2414695611","doi":"10.1007/978-1-4939-2727-2_15","title":"Ethics of Cancer Gene Transfer Clinical Research","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Gene transfer; Cancer; Translation (biology); Gene; Medicine; Engineering ethics; Biology; Genetics; Engineering","score_opus":0.20093644639056052,"score_gpt":0.6336943683142412,"score_spread":0.4327579219236807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414695611","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24107936,0.006339122,0.7514664,0.00024209468,0.0003314596,0.00013769302,0.000008383915,0.000005109914,0.00039038272],"genre_scores_gemma":[0.35244617,0.0014566763,0.6453113,0.00030748761,0.00021728953,0.00006340949,0.0000329196,0.000038934562,0.00012582935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962123,0.0024579554,0.0004407175,0.00041392766,0.00013217547,0.00034289583],"domain_scores_gemma":[0.9989969,0.00017360479,0.00002607042,0.00042849706,0.00025723502,0.00011765408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007706897,0.00012622152,0.00027956103,0.00012099197,0.000019426074,0.000003948195,0.00029186966,0.00058794144,0.00001017712],"category_scores_gemma":[0.0017220126,0.00012025786,0.0001097398,0.00024091444,0.0003017813,8.6087084e-7,0.0001454069,0.0005817728,0.0000016219552],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067705754,0.000051057865,0.008142672,0.000015797454,0.00004393704,0.000005154373,0.000112737274,0.00060396927,0.9778076,0.0006697125,0.00006322626,0.012416443],"study_design_scores_gemma":[0.00065676623,0.00041385615,0.0008484071,0.000011052096,0.000011030652,0.0000048713296,0.00006553302,0.00014683284,0.97465414,0.0016044473,0.021440467,0.0001425776],"about_ca_topic_score_codex":0.0001424504,"about_ca_topic_score_gemma":0.00008970297,"teacher_disagreement_score":0.11136681,"about_ca_system_score_codex":0.000015433661,"about_ca_system_score_gemma":0.0002498691,"threshold_uncertainty_score":0.4903973},"labels":[],"label_agreement":null},{"id":"W2414705398","doi":"10.1007/978-1-4939-3360-0_13","title":"PCR Techniques in Next-Generation Sequencing","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University Health Network","funders":"European Hematology Association","keywords":"DNA sequencing; Massive parallel sequencing; Computational biology; Ion semiconductor sequencing; Biology; Genetics; Gene","score_opus":0.05462902808691557,"score_gpt":0.3746294052780493,"score_spread":0.3200003771911337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414705398","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22601864,0.0010457991,0.77156925,0.00028890235,0.00018113211,0.00018092606,0.000008671875,0.000010961332,0.0006957208],"genre_scores_gemma":[0.31940547,0.00093827315,0.6782411,0.00094489416,0.00020962293,0.000107909545,0.000042934455,0.000030249914,0.000079555575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985,0.00044325643,0.00029520624,0.0004355181,0.00003661384,0.00028944484],"domain_scores_gemma":[0.99944276,0.000064807515,0.00006609171,0.0003453245,0.00003880421,0.000042229927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008298626,0.00014919463,0.00018774148,0.00014049644,0.000018967548,0.000011681539,0.00018206958,0.0002771784,0.000014938848],"category_scores_gemma":[0.00066290284,0.00012225079,0.000060518807,0.00013088506,0.00008701851,0.0000030813405,0.00013243788,0.000082508624,0.0000028161655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015678816,0.000014829673,0.0025944894,0.0000028954921,0.0000065449894,0.000009591128,0.000012553826,0.000014383002,0.9117722,0.0015456629,0.000050554383,0.08396062],"study_design_scores_gemma":[0.00033438343,0.00016658434,0.0001624209,0.000016356676,0.0000035528165,0.00000959898,0.000011539556,0.000076047254,0.9807391,0.0035970046,0.014695991,0.0001874185],"about_ca_topic_score_codex":0.00010100195,"about_ca_topic_score_gemma":0.0002670004,"teacher_disagreement_score":0.093386844,"about_ca_system_score_codex":0.000099468714,"about_ca_system_score_gemma":0.00010739809,"threshold_uncertainty_score":0.49852422},"labels":[],"label_agreement":null},{"id":"W2414711496","doi":"10.1007/978-1-60327-412-8_9","title":"Reconstitution of the SecY Translocon in Nanodiscs","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Translocon; Lipid bilayer; Membrane; Micelle; Biophysics; Membrane protein; Liposome; Chemistry; Nanotechnology; Materials science; Biology; Biochemistry","score_opus":0.010419399802657936,"score_gpt":0.33409211860832955,"score_spread":0.3236727188056716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414711496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94988966,0.00025197968,0.04778042,0.00042811062,0.00073700247,0.00023956508,0.000010367517,0.0000045930606,0.00065828254],"genre_scores_gemma":[0.835006,0.00006502279,0.16468139,0.00014159958,0.000035951558,0.000021723736,0.000014469825,0.000010176405,0.000023633063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986562,0.0004374275,0.00032180652,0.00032146942,0.000033377073,0.00022970779],"domain_scores_gemma":[0.9993641,0.000017607783,0.00009272135,0.00047243992,0.0000307821,0.000022355098],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007360889,0.00012947479,0.00020234767,0.00009656761,0.000019947718,0.0000036457702,0.00036381948,0.0006288719,0.000016306496],"category_scores_gemma":[0.00026440521,0.00009865746,0.00009262285,0.00023055592,0.00042278014,0.0000010625696,0.00013532743,0.00030792502,6.752168e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028435972,0.000042857122,0.0077457903,0.000006656037,0.000008415966,0.0000013230106,0.000013609869,0.000010871488,0.9725733,0.0039264243,0.0000036162112,0.015638698],"study_design_scores_gemma":[0.0004277985,0.00010990889,0.0038185145,0.000007332178,0.0000051935035,0.000017031258,0.000010076734,0.000021182721,0.97976905,0.003502958,0.012194484,0.000116458854],"about_ca_topic_score_codex":0.000054532462,"about_ca_topic_score_gemma":0.00054896006,"teacher_disagreement_score":0.11690098,"about_ca_system_score_codex":0.0000065160575,"about_ca_system_score_gemma":0.00008051204,"threshold_uncertainty_score":0.48504362},"labels":[],"label_agreement":null},{"id":"W2414774663","doi":"10.1007/978-1-4939-9814-2_15","title":"Characterization of Extracellular HSV-1 Virions by Proteomics","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Extracellular; Capsid; Differential centrifugation; Proteomics; Chemistry; Centrifugation; Mass spectrometry; Biology; Virus; Molecular biology; Cell biology; Virology; Chromatography; Biochemistry; Gene","score_opus":0.020001558534765197,"score_gpt":0.3201422913529023,"score_spread":0.3001407328181371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414774663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89586115,0.0001908395,0.10291925,0.00016587216,0.00009348675,0.00030886434,0.00002935326,0.000018265284,0.00041290966],"genre_scores_gemma":[0.8058651,0.00010399312,0.19305925,0.00018023509,0.000037839334,0.00008137436,0.00013906145,0.0000026432476,0.00053051714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988785,0.00045585213,0.00023206409,0.00022710813,0.00003962075,0.00016688387],"domain_scores_gemma":[0.9996668,0.000107855434,0.00010738885,0.000060536764,0.00003775022,0.00001963397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046571562,0.000096407566,0.00020911322,0.000027336804,0.00004539988,0.000006805824,0.00013484857,0.00013470015,0.00018759274],"category_scores_gemma":[0.0001030587,0.000043757766,0.0000610997,0.0002875667,0.00009791929,0.000025533607,0.00008225731,0.000104908584,0.000017560049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009684101,0.000046983823,0.016073642,0.0000035693536,0.00000882693,3.8449156e-7,0.000025069989,0.0000011953832,0.97174203,0.001909502,0.0000027505873,0.010176342],"study_design_scores_gemma":[0.00008490926,0.00028128948,0.011496612,0.0000072493153,0.000005516016,0.0000018443754,0.0000348343,0.00006417983,0.971378,0.0012085648,0.015317748,0.00011923496],"about_ca_topic_score_codex":0.00007887448,"about_ca_topic_score_gemma":0.00002114766,"teacher_disagreement_score":0.09014001,"about_ca_system_score_codex":0.000016600357,"about_ca_system_score_gemma":0.000004677156,"threshold_uncertainty_score":0.2054009},"labels":[],"label_agreement":null},{"id":"W2414796021","doi":"10.1007/978-1-61737-992-5_30","title":"MR-Guided Focused Ultrasound for Brain Ablation and Blood–Brain Barrier Disruption","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Health Sciences Centre; Sunnybrook Health Science Centre","funders":"National Institute of Biomedical Imaging and Bioengineering","keywords":"Focused ultrasound; Medicine; Blood–brain barrier; Ablation; Ultrasound; Drug delivery; Microbubbles; Parenchyma; Thermal ablation; Biomedical engineering; Neuroscience; Radiology; Central nervous system; Pathology; Materials science; Psychology; Internal medicine; Nanotechnology","score_opus":0.01536954175476471,"score_gpt":0.34317215992410566,"score_spread":0.327802618169341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414796021","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32661697,0.00011368248,0.67214143,0.00028613737,0.0001263928,0.00027939345,0.00001783542,0.00007031848,0.00034783932],"genre_scores_gemma":[0.17981574,0.000019408348,0.8193564,0.00031500295,0.00007614988,0.0002449061,0.000071274386,0.000038496768,0.0000626489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911827,0.00016045792,0.00022324601,0.00024333243,0.000030775653,0.00022393196],"domain_scores_gemma":[0.99868083,0.0009774284,0.000029426958,0.00023058336,0.00002559876,0.00005614233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078762026,0.00013916088,0.00018071443,0.00010853496,0.000054813292,0.000021652444,0.00010067238,0.00024503798,0.000029438164],"category_scores_gemma":[0.00079995533,0.00013800536,0.00005093003,0.00013944325,0.00008345825,0.000035396937,0.000012678179,0.00019857685,0.0000020848624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029723199,0.00001269265,0.0010542492,0.000014853282,0.000022926772,4.4506314e-7,0.00012027403,0.00010221854,0.971493,0.014450097,0.000053434098,0.012672818],"study_design_scores_gemma":[0.0019463584,0.000119574346,0.004508396,0.000012708223,0.00007773488,0.000077394674,0.00004808538,0.009919646,0.7805136,0.13264303,0.069493316,0.00064015324],"about_ca_topic_score_codex":0.000013110632,"about_ca_topic_score_gemma":0.000053124797,"teacher_disagreement_score":0.1909794,"about_ca_system_score_codex":0.000010882234,"about_ca_system_score_gemma":0.000010534363,"threshold_uncertainty_score":0.56276953},"labels":[],"label_agreement":null},{"id":"W2414809637","doi":"10.1007/978-1-4939-1789-1_9","title":"Cell Surface Biotinylation of Receptor Tyrosine Kinases to Investigate Intracellular Trafficking","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biotinylation; Endosome; Receptor tyrosine kinase; Cell biology; Cell surface receptor; Intracellular; Biotin; Streptavidin; Biochemistry; Cell; Cell membrane; Chemistry; Extracellular; Kinase; Biology","score_opus":0.013780138360138493,"score_gpt":0.32370046578879674,"score_spread":0.30992032742865827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414809637","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51398164,0.002243312,0.4825961,0.00028963582,0.00024411744,0.00017522852,0.000005644823,0.000013051603,0.00045129223],"genre_scores_gemma":[0.40704477,0.0001500885,0.5922499,0.00029344176,0.00005412513,0.0000060194016,0.000072271585,0.000025546182,0.00010386788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976683,0.0010291918,0.0004184433,0.00049140176,0.00006685895,0.00032578156],"domain_scores_gemma":[0.9992467,0.00007444828,0.00015020893,0.00035547093,0.00008641513,0.00008672309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011746258,0.0002210943,0.00034635092,0.00011244347,0.00004660352,0.000007178005,0.00022667409,0.00041812958,0.000010611872],"category_scores_gemma":[0.000636174,0.00020200154,0.00009983058,0.0003099807,0.00020901267,0.0000017931646,0.00017743552,0.00017705954,0.0000067634237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041205014,0.000060003822,0.0023759669,0.00003296248,0.000030272347,9.277449e-7,0.000084546846,0.0015814574,0.99094087,0.000519122,0.00011435549,0.0042183055],"study_design_scores_gemma":[0.00041516923,0.00046537572,0.00029436822,0.000029837522,0.000016949945,0.000002186357,0.00004152011,0.00030146047,0.9828934,0.0002540976,0.015054327,0.00023130042],"about_ca_topic_score_codex":0.00003104917,"about_ca_topic_score_gemma":0.000007460387,"teacher_disagreement_score":0.10965378,"about_ca_system_score_codex":0.000013705841,"about_ca_system_score_gemma":0.000029489274,"threshold_uncertainty_score":0.82373834},"labels":[],"label_agreement":null},{"id":"W2414828157","doi":"10.1007/978-1-4939-2957-3_5","title":"Cell Synchronization of Mouse Embryonic Fibroblasts","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Occupational Cancer Research Centre; Children’s Health Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Synchronizing; Cell synchronization; Mitosis; Embryonic stem cell; Cell cycle; Cell biology; Biology; Synchronization (alternating current); Cell; Fibroblast; Cell culture; Genetics; Engineering; Topology (electrical circuits); Gene","score_opus":0.013648502352797237,"score_gpt":0.33324967930208804,"score_spread":0.3196011769492908,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414828157","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2561976,0.0015348609,0.7411524,0.000033269924,0.000112824935,0.00013830699,0.00000918938,0.000006888993,0.00081466493],"genre_scores_gemma":[0.26385018,0.00019055397,0.73464465,0.00023104945,0.000055838176,0.000026582224,0.00022575891,0.00004284176,0.00073255115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846274,0.00060752383,0.00027716675,0.00034880536,0.000053255677,0.00025053014],"domain_scores_gemma":[0.9992672,0.000019759595,0.00012217011,0.0004132179,0.0001055716,0.00007207766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006309231,0.00015495859,0.00023125642,0.00010424963,0.000012808437,0.000004888206,0.00023803633,0.00030644366,0.000007073715],"category_scores_gemma":[0.0002617891,0.00015601443,0.0000809521,0.000166476,0.00010473852,0.0000020542705,0.00017467141,0.00010076894,0.0000045710135],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036847363,0.000065416134,0.0012380047,0.000021892634,0.000017212458,0.0000020776974,0.000029664494,0.00080158893,0.99503696,0.0004352985,0.00020549941,0.002109549],"study_design_scores_gemma":[0.0006650251,0.00037056688,0.000028702176,0.0000070698675,0.0000106575635,0.000007563597,0.000039244966,0.00065325253,0.9909172,0.00052082044,0.006612209,0.00016770266],"about_ca_topic_score_codex":0.000031906613,"about_ca_topic_score_gemma":0.000017111672,"teacher_disagreement_score":0.007652593,"about_ca_system_score_codex":0.000026196576,"about_ca_system_score_gemma":0.00013108239,"threshold_uncertainty_score":0.63620836},"labels":[],"label_agreement":null},{"id":"W2414873431","doi":"10.1007/978-1-61779-585-5_15","title":"Characterization and Evolutionary Analysis of Protein–Protein Interaction Networks","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Protein Interaction Networks; Protein–protein interaction; Modularity (biology); Interaction network; Budding yeast; Protein function; Computational biology; Function (biology); Perspective (graphical); Scale (ratio); Computer science; Data science; Biology; Artificial intelligence; Evolutionary biology; Genetics; Yeast; Geography; Saccharomyces cerevisiae","score_opus":0.011554819214661675,"score_gpt":0.3226680140079595,"score_spread":0.31111319479329785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414873431","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3751009,0.0007793402,0.62376934,0.000020182413,0.000070951224,0.00015815998,0.0000064828964,0.0000030782717,0.000091523354],"genre_scores_gemma":[0.7871313,0.00005693425,0.21211661,0.00010023897,0.00006951269,0.000043583335,0.00042131942,0.000010649267,0.000049813603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987847,0.0004037049,0.00034363137,0.00019010672,0.000036233156,0.00024161206],"domain_scores_gemma":[0.99947006,0.000015694533,0.00018456498,0.00023415028,0.000041818806,0.000053720178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000742734,0.00012729382,0.00024750814,0.00019483191,0.000026362393,0.000005650747,0.00009181302,0.0002674544,0.0000142353765],"category_scores_gemma":[0.00007250062,0.00012343592,0.000088402,0.00032600635,0.000089397145,0.0000069827083,0.00012254225,0.00011694862,4.2615622e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045555884,0.00003834508,0.0056517646,0.000010359498,0.00020825845,2.1541368e-7,0.000036854934,0.00042149462,0.97001106,0.001990144,0.0000019934782,0.02158394],"study_design_scores_gemma":[0.0012908345,0.00072409224,0.066446245,0.00007606588,0.00062816805,0.000027424467,0.00017814392,0.087843955,0.8204259,0.0027229239,0.018590389,0.0010458054],"about_ca_topic_score_codex":0.000014587838,"about_ca_topic_score_gemma":0.000005283499,"teacher_disagreement_score":0.4120304,"about_ca_system_score_codex":0.000014253702,"about_ca_system_score_gemma":0.00001348827,"threshold_uncertainty_score":0.50335705},"labels":[],"label_agreement":null},{"id":"W2414874570","doi":"10.1007/978-1-62703-968-0_8","title":"Rapid Screening of Endonuclease Target Site Preference Using a Modified Bacterial Two-Plasmid Selection","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Homing endonuclease; Plasmid; Endonuclease; Biology; Restriction enzyme; Genetics; Bacterial conjugation; Computational biology; DNA; Molecular biology","score_opus":0.02986903467698526,"score_gpt":0.3872431047885814,"score_spread":0.35737407011159616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414874570","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37335318,0.00019610285,0.6259819,0.0000070350634,0.00013629743,0.00010402174,0.000007210287,0.0000089460655,0.00020526937],"genre_scores_gemma":[0.46906474,0.000012807987,0.5307253,0.000041791878,0.00007725667,0.000008804708,0.000045357567,0.000018283812,0.000005640668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980776,0.00077037315,0.0003472481,0.0004369275,0.000060406735,0.0003075026],"domain_scores_gemma":[0.9994149,0.000047819525,0.000113822185,0.00029388623,0.00006355243,0.00006597769],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008554903,0.00019968563,0.00029819264,0.00013679647,0.00003420622,0.00000912284,0.00017443988,0.00022418135,0.00003001677],"category_scores_gemma":[0.00039826034,0.00021081041,0.00010176991,0.00016795262,0.00008066007,0.00000291262,0.00013236652,0.00014063252,6.8982587e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011918809,0.000026016443,0.0011146581,0.000019668296,0.000032517513,8.812245e-7,0.00002190186,0.019146545,0.9686189,0.00029544643,0.0000037458321,0.010600495],"study_design_scores_gemma":[0.0008849233,0.0002718907,0.00029702694,0.000015285665,0.000019424018,0.000015771602,0.0000079462425,0.047309753,0.94884783,0.00040735365,0.0017096567,0.00021316561],"about_ca_topic_score_codex":0.00007219334,"about_ca_topic_score_gemma":0.000012497672,"teacher_disagreement_score":0.09571156,"about_ca_system_score_codex":0.000009865992,"about_ca_system_score_gemma":0.00003353455,"threshold_uncertainty_score":0.8596599},"labels":[],"label_agreement":null},{"id":"W2414875068","doi":"10.1007/978-1-60761-753-2_6","title":"Inhibition of Viral Transcription Using Designed Zinc Finger Proteins","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Transcription (linguistics); Zinc finger; Biology; Virology; DNA; Hepatitis B virus PRE beta; Hepatitis B virus; Viral structural protein; Genome; Viral entry; Polymerase; Transcription factor; RNA polymerase; RNA; Virus; Hepatitis B virus DNA polymerase; Viral replication; Genetics; Gene","score_opus":0.050389026365419406,"score_gpt":0.4048149013364449,"score_spread":0.35442587497102546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414875068","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5003743,0.00008510214,0.49885494,0.00007498023,0.00011076342,0.00027781827,0.0000023285031,0.0000124148355,0.00020735996],"genre_scores_gemma":[0.42817858,0.0000073986553,0.5716134,0.00012676162,0.000024690466,0.000025975516,0.0000053870426,0.000010462421,0.0000073951373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855155,0.00062952563,0.00032386434,0.00022246175,0.000068287896,0.00020429623],"domain_scores_gemma":[0.9995444,0.000063971995,0.0000826075,0.00019533862,0.00007901795,0.000034705914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010277651,0.00011651081,0.00034749976,0.00019236616,0.000029351488,0.00000229669,0.000041581807,0.00022393864,0.00004462952],"category_scores_gemma":[0.00070217886,0.00010628429,0.00008215449,0.0001766895,0.00019454029,0.000023529708,0.000027417693,0.00027101574,0.0000018006031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006183398,0.00007209477,0.007903566,0.00004423145,0.000023875387,0.000021048203,0.00022463733,0.0000029392486,0.9810502,0.0014323159,0.0000014376278,0.009161837],"study_design_scores_gemma":[0.00068112125,0.0002927177,0.0036183896,0.00004760871,0.000042985343,0.000019496463,0.000010394308,0.00035189404,0.99069434,0.0039247205,0.00022129166,0.00009505512],"about_ca_topic_score_codex":0.00042635083,"about_ca_topic_score_gemma":0.00017384878,"teacher_disagreement_score":0.072758436,"about_ca_system_score_codex":0.00003396086,"about_ca_system_score_gemma":0.000052187734,"threshold_uncertainty_score":0.43341476},"labels":[],"label_agreement":null},{"id":"W2414944801","doi":"10.1007/978-1-62703-038-0_2","title":"Methods of Sperm Vitality Assessment","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Health Sciences Centre; CReATe Fertility Centre; Women's College Hospital; University of Toronto","funders":"","keywords":"Vitality; Sperm; Andrology; Staining; Biology; Medicine; Pathology; Genetics","score_opus":0.05449754854770023,"score_gpt":0.5084560704883786,"score_spread":0.4539585219406784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414944801","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.086117186,0.0010292724,0.90534323,0.00013129182,0.00050758873,0.00021303562,0.0000017437899,0.000022781536,0.006633845],"genre_scores_gemma":[0.13556848,0.0000137439965,0.86396915,0.00029712007,0.0000654048,0.00002007608,0.000017072345,0.000013834547,0.00003511729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99710417,0.0019618256,0.00034275223,0.00021598453,0.00007847752,0.00029677406],"domain_scores_gemma":[0.99902284,0.00034324755,0.00009509071,0.00038015444,0.000060388214,0.00009829265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038907584,0.00013070686,0.00043537645,0.00015549698,0.000014319927,0.0000018902122,0.00006782776,0.00019709642,0.00020152754],"category_scores_gemma":[0.0012044952,0.0001071412,0.00013234526,0.00027235597,0.00012191922,0.000024462262,0.00006750774,0.00021568076,0.0000037759114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021852959,0.0001875333,0.13866575,0.000032784377,0.000049549366,0.0000063295547,0.00004645406,0.0000014742529,0.7888792,0.010576779,0.0000061192195,0.06152616],"study_design_scores_gemma":[0.00094603817,0.00035595094,0.20989148,0.000027008975,0.00015810665,0.00010969421,0.00007592776,0.00030740188,0.77652866,0.0063168677,0.0051162466,0.00016661998],"about_ca_topic_score_codex":0.000048599217,"about_ca_topic_score_gemma":6.643588e-7,"teacher_disagreement_score":0.07122574,"about_ca_system_score_codex":0.00007039204,"about_ca_system_score_gemma":0.00005046629,"threshold_uncertainty_score":0.4369091},"labels":[],"label_agreement":null},{"id":"W2414975165","doi":"10.1007/978-1-61779-173-4_13","title":"Use of Proteome Arrays to Globally Identify Substrates for E3 Ubiquitin Ligases","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Ubiquitin; Ubiquitin-Protein Ligases; Proteome; Deubiquitinating enzyme; Ubiquitin ligase; Mdm2; Ubiquitin-conjugating enzyme; Cell biology; Biology; Proteomics; Protein degradation; Computational biology; F-box protein; Biochemistry; Chemistry; Gene","score_opus":0.0908053891205788,"score_gpt":0.3958140103317534,"score_spread":0.3050086212111746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414975165","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4280425,0.0003136067,0.5700343,0.00004740583,0.00012207626,0.0009050935,0.00008627535,0.000013856589,0.0004348195],"genre_scores_gemma":[0.16002977,0.000033317294,0.8387421,0.00051076635,0.00006062826,0.000420787,0.00008456815,0.000036933325,0.00008112866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976796,0.0006458165,0.0005116404,0.0006061386,0.00007568951,0.0004811362],"domain_scores_gemma":[0.99891865,0.000081343875,0.00017055795,0.000532739,0.00017619379,0.00012048788],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012105776,0.000260241,0.0003902497,0.00015039793,0.00003773802,0.000017069053,0.000449213,0.00035971837,0.000033619493],"category_scores_gemma":[0.0012346486,0.0002539289,0.0001935673,0.00022043023,0.00015726946,0.0000053922136,0.00021887019,0.00010966685,0.0000044409703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002820005,0.00009967278,0.00176808,0.00005268786,0.000055672233,0.000006422793,0.00010234862,0.00001550702,0.9896399,0.002686054,0.000059167403,0.0052324883],"study_design_scores_gemma":[0.00037780136,0.0010762226,0.001026554,0.00003130924,0.000019910203,0.000012495324,0.000039268834,0.00001371283,0.98470944,0.0068109627,0.005600365,0.00028193605],"about_ca_topic_score_codex":0.00009830993,"about_ca_topic_score_gemma":0.000046047175,"teacher_disagreement_score":0.26870775,"about_ca_system_score_codex":0.0000141802075,"about_ca_system_score_gemma":0.000086534,"threshold_uncertainty_score":0.9999913},"labels":[],"label_agreement":null},{"id":"W2414997272","doi":"10.1007/978-1-4939-0467-9_4","title":"Advanced Techniques for In Situ Analysis of the Biofilm Matrix (Structure, Composition, Dynamics) by Means of Laser Scanning Microscopy","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Biofilm; Extracellular matrix; In situ; Extracellular polymeric substance; Microscopy; Extracellular; Fluorescence microscope; Chemistry; Matrix (chemical analysis); Biophysics; Confocal laser scanning microscopy; Dynamics (music); Materials science; Nanotechnology; Fluorescence; Bacteria; Biology; Optics; Biochemistry; Chromatography; Physics; Acoustics; Organic chemistry","score_opus":0.005367945844225169,"score_gpt":0.33737851046973405,"score_spread":0.3320105646255089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2414997272","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6359851,0.00016206333,0.36333054,0.00006113161,0.000075973156,0.00020760176,0.00012958518,0.0000036090196,0.00004443304],"genre_scores_gemma":[0.566398,0.000013829273,0.43316954,0.000105335304,0.000009741529,0.000008572974,0.00027577928,0.000012069569,0.000007094269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982809,0.00065064494,0.00044975197,0.00034639027,0.000041955856,0.00023039084],"domain_scores_gemma":[0.9991782,0.0000673497,0.00025482726,0.00039145246,0.000084974265,0.000023237853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006549294,0.00016333812,0.00045677813,0.00019333107,0.000028163053,0.000005062244,0.00023894405,0.00030107898,0.0000024652197],"category_scores_gemma":[0.00017022372,0.00013390757,0.00019743813,0.00046738226,0.00019364424,0.0000023465468,0.000109580156,0.00009425576,2.6606424e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010499395,0.0000293375,0.0036458524,0.000022106047,0.00010927785,1.35488e-7,0.000014757139,0.000200701,0.99117285,0.00037825908,0.000009310837,0.0043124137],"study_design_scores_gemma":[0.00036196716,0.00016629546,0.0008018697,0.00002288392,0.000095865595,0.000001339887,0.00001640753,0.0007420273,0.99668944,0.00033620882,0.00062523613,0.00014045574],"about_ca_topic_score_codex":0.00006867063,"about_ca_topic_score_gemma":0.00019943618,"teacher_disagreement_score":0.06983902,"about_ca_system_score_codex":0.000022446036,"about_ca_system_score_gemma":0.000022918612,"threshold_uncertainty_score":0.5460592},"labels":[],"label_agreement":null},{"id":"W2415014060","doi":"10.1007/978-1-61779-818-4_8","title":"The Study of In Vitro Development in Plants: General Approaches and Photography","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Explant culture; Photography; In vitro; Computer science; Biology; Art; Visual arts; Biochemistry","score_opus":0.03670037346912317,"score_gpt":0.33549713123092717,"score_spread":0.298796757761804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415014060","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9808329,0.0073611126,0.011351144,0.000020278969,0.00008243537,0.00026968503,0.0000020641062,0.0000016318608,0.00007876704],"genre_scores_gemma":[0.9168212,0.00015345392,0.08280071,0.000036635745,0.000028690216,0.00008240695,0.000050665974,0.0000070523656,0.000019178626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851984,0.0007354361,0.00026689292,0.00021052931,0.000037536527,0.00022978742],"domain_scores_gemma":[0.9997244,0.000029794845,0.000057197703,0.00015312739,0.000008667267,0.000026803904],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010356903,0.00011155302,0.00017369732,0.00009865261,0.000028328712,0.00000428309,0.00011575524,0.00014858814,3.7116905e-7],"category_scores_gemma":[0.000056237517,0.0000772034,0.000020535203,0.00011729592,0.00006841288,0.0000021261194,0.0000829439,0.00009526913,1.16119516e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073886215,0.0001809782,0.046794113,0.0000043895034,0.000023751381,0.0000021993776,0.00067592424,0.000021202406,0.9359244,0.0000689019,0.000004145013,0.016226118],"study_design_scores_gemma":[0.0006094314,0.00009968726,0.014747042,0.0000040073405,0.0000037448267,0.000009660778,0.0004737783,0.00004048865,0.9790659,0.000045781362,0.0047877426,0.00011276297],"about_ca_topic_score_codex":0.00014390671,"about_ca_topic_score_gemma":0.00096921733,"teacher_disagreement_score":0.07144956,"about_ca_system_score_codex":0.0000092239625,"about_ca_system_score_gemma":0.000024009669,"threshold_uncertainty_score":0.31482634},"labels":[],"label_agreement":null},{"id":"W2415046565","doi":"10.1007/978-1-59745-467-4_15","title":"Quantifying and Localizing Actin-Free Barbed Ends in Neutrophils","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institutes of Health Research; University of Toronto","funders":"","keywords":"Cell biology; Actin cytoskeleton; Actin; Cytoskeleton; Chemotaxis; Signal transduction; Receptor; Actin remodeling; Chemistry; Biology; Biochemistry; Cell","score_opus":0.03578763715932256,"score_gpt":0.41172568949887584,"score_spread":0.3759380523395533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415046565","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3418322,0.0014775431,0.6552263,0.00012163902,0.00026491922,0.00012572197,0.0000029138316,0.000008131377,0.0009406666],"genre_scores_gemma":[0.6531057,0.00024517882,0.3459313,0.00049924385,0.000077296725,0.000016677257,0.00003830652,0.0000331511,0.000053134332],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981515,0.00045008946,0.00039035454,0.0005180089,0.000052353495,0.00043769486],"domain_scores_gemma":[0.99924177,0.000092197624,0.000085163054,0.00046736415,0.00003530988,0.000078209625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018653491,0.00019113893,0.0002497345,0.00026163072,0.00004244135,0.000016391492,0.00024073276,0.00032215292,0.00001895047],"category_scores_gemma":[0.000613283,0.00019853549,0.000079752164,0.00023543321,0.000074701165,0.000003968864,0.00030421137,0.00028823395,0.0000015247514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063538624,0.000042272393,0.0027170219,0.000009198165,0.000018276487,0.000038981303,0.000035022375,0.00001717671,0.9766765,0.0050181695,0.00001122158,0.015352614],"study_design_scores_gemma":[0.00079404976,0.00021547616,0.001151306,0.000019462308,0.000009318435,0.0000615469,0.00015058313,0.00048881007,0.9770146,0.0027156747,0.017117798,0.00026139794],"about_ca_topic_score_codex":0.00012175523,"about_ca_topic_score_gemma":0.000354981,"teacher_disagreement_score":0.31127352,"about_ca_system_score_codex":0.00002847722,"about_ca_system_score_gemma":0.000031660373,"threshold_uncertainty_score":0.8096042},"labels":[],"label_agreement":null},{"id":"W2415048633","doi":"10.1007/978-1-60327-355-8_8","title":"Mapping Genomic Targets of DNA Helicases by Chromatin Immunoprecipitation in Saccharomyces cerevisiae","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Helicase; Chromatin immunoprecipitation; RecQ helicase; Biology; Control of chromosome duplication; DNA replication; Saccharomyces cerevisiae; Chromatin; ChIP-sequencing; Minichromosome maintenance; Cell biology; DNA; Genetics; Chromatin remodeling; Gene; Gene expression; Promoter","score_opus":0.011925578218202336,"score_gpt":0.3353262096168108,"score_spread":0.3234006313986085,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415048633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7208119,0.0052968194,0.27316064,0.000108343644,0.000085963096,0.00027751384,0.000014202817,0.000011953139,0.00023265084],"genre_scores_gemma":[0.55412215,0.000252832,0.4451071,0.00027106897,0.00002316614,0.0000327773,0.00013932843,0.00001964331,0.00003193624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740785,0.0010702334,0.00058591017,0.0005154973,0.00006738083,0.0003531091],"domain_scores_gemma":[0.9992114,0.00005737535,0.00021266706,0.0004326226,0.000043290383,0.000042682495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011242186,0.00022523403,0.00040685164,0.00021667416,0.000021129807,0.000007876237,0.0003246674,0.00031252822,0.000022328746],"category_scores_gemma":[0.00042220895,0.00023649639,0.00011564272,0.00024944777,0.000074372816,0.0000044037456,0.00010918168,0.00013433617,0.0000029497949],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038639733,0.00007264801,0.0005455747,0.00001839279,0.000022680011,0.0000063574485,0.00011451033,0.00003260499,0.97988766,0.0003380056,0.000030935953,0.018891968],"study_design_scores_gemma":[0.00058836094,0.00046006773,0.0021748773,0.000033856642,0.0000056539093,0.000012409623,0.00010920861,0.00011784509,0.99063927,0.004009641,0.001615548,0.0002332714],"about_ca_topic_score_codex":0.000036399673,"about_ca_topic_score_gemma":0.0000072875937,"teacher_disagreement_score":0.17194648,"about_ca_system_score_codex":0.00003882279,"about_ca_system_score_gemma":0.000044124732,"threshold_uncertainty_score":0.9644043},"labels":[],"label_agreement":null},{"id":"W2415054921","doi":"10.1007/978-1-59745-385-1_16","title":"Basics of Health Technology Assessment","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"McMaster University; Programs for Assessment of Technology in Health Research Institute","funders":"","keywords":"Health technology; Technology assessment; Mainstream; Emerging technologies; Process (computing); Risk analysis (engineering); Health care; Management science; Medicine; Computer science; Process management; Engineering; Political science","score_opus":0.5802973829040005,"score_gpt":0.6389401677093433,"score_spread":0.058642784805342796,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415054921","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[8.883054e-7,0.58100843,0.41492134,0.0017907913,0.00041737276,0.0008044427,0.0001315315,0.000023150102,0.0009020556],"genre_scores_gemma":[3.9697207e-7,0.5581126,0.44066575,0.0008620515,0.00003416304,0.0001713159,0.00007153374,0.000042083055,0.00004008222],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98007303,0.0075642057,0.010536721,0.0010869649,0.000053271135,0.0006858276],"domain_scores_gemma":[0.98944086,0.0017320141,0.0075231506,0.0011587562,0.000047570145,0.000097650416],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.032012273,0.00045219227,0.007426167,0.0019993903,0.00007522086,0.000008397464,0.00075182726,0.0011136734,0.000096117525],"category_scores_gemma":[0.004359121,0.00053120515,0.00052394334,0.000841676,0.00029215685,0.000041310534,0.00022071488,0.00077053206,0.00012523422],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[7.4414777e-7,0.00011660943,0.00057625805,0.007801864,0.00019220587,0.0000055797477,0.000066595174,0.0000063900984,9.0522957e-7,0.46947777,0.0004840038,0.52127105],"study_design_scores_gemma":[0.00021855837,0.0001344107,0.00002088249,0.0012487874,0.000011982599,0.000036625854,0.000048106464,0.000040819934,0.000001379586,0.031191193,0.9666871,0.00036017955],"about_ca_topic_score_codex":0.00019243162,"about_ca_topic_score_gemma":0.000015597008,"teacher_disagreement_score":0.9662031,"about_ca_system_score_codex":0.0010462578,"about_ca_system_score_gemma":0.0015003813,"threshold_uncertainty_score":0.99971396},"labels":[],"label_agreement":null},{"id":"W2415089278","doi":"10.1007/978-1-61779-005-8_22","title":"RNA Purification from Tumor Cell Protrusions Using Porous Polycarbonate Filters","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pseudopodia; Lamellipodium; Cell biology; Actin; RNA; Biology; Translation (biology); Cell migration; Cell; Messenger RNA; Biochemistry; Gene","score_opus":0.03972327989412597,"score_gpt":0.34806647894970694,"score_spread":0.30834319905558094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415089278","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.385764,0.00066845043,0.61064386,0.000024890915,0.00039897425,0.00026522094,0.000024989788,0.0000129818045,0.0021966528],"genre_scores_gemma":[0.35945353,0.00004915855,0.63975036,0.00034056042,0.000063882486,0.000059264883,0.00014696969,0.000036919566,0.000099341254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809045,0.00061177055,0.00035319,0.00056523614,0.00005630059,0.00032305473],"domain_scores_gemma":[0.9991109,0.00002122794,0.00016397893,0.00056562683,0.00005784528,0.00008045267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042096764,0.00020908637,0.00021401126,0.00013560291,0.000065185115,0.000011706118,0.0002959737,0.00022917826,0.00013803788],"category_scores_gemma":[0.00013924419,0.00021177618,0.00012565109,0.0001564302,0.00006942928,0.0000042552597,0.0001816949,0.000204301,0.000007739219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048301903,0.000105697975,0.00026118822,0.0000036167726,0.000028516146,0.000016440927,0.000072071074,0.000011930167,0.99642175,0.00060000125,0.000011706485,0.0024187714],"study_design_scores_gemma":[0.0003217924,0.00016891402,0.00014614374,0.000009027352,0.000026486274,0.00001628958,0.00007316814,0.0011538694,0.99059385,0.0039287587,0.0033162704,0.0002454465],"about_ca_topic_score_codex":0.0006570574,"about_ca_topic_score_gemma":0.000025693265,"teacher_disagreement_score":0.029106518,"about_ca_system_score_codex":0.000030707935,"about_ca_system_score_gemma":0.000068699796,"threshold_uncertainty_score":0.8635982},"labels":[],"label_agreement":null},{"id":"W2415108192","doi":"10.1007/978-1-4939-0799-1_8","title":"Targeted Mutagenesis of a Specific Gene in Yeast","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Mutagenesis; Gene; Biology; Genetics; Mutant; Point mutation; Gene targeting; Gene product; Function (biology); Phenotype; Genome; Mutation; Computational biology; Yeast; Gene expression","score_opus":0.02100994495306109,"score_gpt":0.37232052957902595,"score_spread":0.3513105846259649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415108192","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5980871,0.001871592,0.39871842,0.00004682515,0.00011467839,0.00015599563,0.000011819846,0.000004107246,0.000989464],"genre_scores_gemma":[0.58051753,0.00021750397,0.41890454,0.00009346094,0.00006105779,0.00003238713,0.000058996917,0.000024988796,0.00008953695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973699,0.0013093658,0.00037039528,0.0004771022,0.00008927515,0.00038397175],"domain_scores_gemma":[0.99927604,0.0000435092,0.000070416696,0.0004769855,0.000065527645,0.00006752563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013460064,0.000166644,0.00030495663,0.00023615852,0.000015248316,0.0000051961865,0.00034253037,0.0002773614,0.000038024402],"category_scores_gemma":[0.00035859738,0.00016131508,0.00009876125,0.00034378795,0.00016489856,0.0000010444118,0.00022314674,0.00014925443,0.000006302168],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007875672,0.0000741684,0.0070626047,0.000015312093,0.0000158898,0.000006585591,0.000023161514,0.0002413515,0.97323614,0.0004784001,0.000016108921,0.01875153],"study_design_scores_gemma":[0.0006056595,0.00028555637,0.0043752315,0.000007966147,0.000002867803,0.000007811945,0.00001423201,0.00028479737,0.983939,0.0013232846,0.008986157,0.0001674144],"about_ca_topic_score_codex":0.000048741145,"about_ca_topic_score_gemma":0.00003235249,"teacher_disagreement_score":0.020186126,"about_ca_system_score_codex":0.000017351698,"about_ca_system_score_gemma":0.000045887697,"threshold_uncertainty_score":0.65782386},"labels":[],"label_agreement":null},{"id":"W2415121392","doi":"10.1007/978-1-62703-730-3_9","title":"Finding Instances of Riboswitches and Ribozymes by Homology Search of Structured RNA with Infernal","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Armand Frappier Museum; Institute for Research in Immunology and Cancer; Institut National de la Recherche Scientifique","funders":"","keywords":"Ribozyme; Homology (biology); Computational biology; Genome; RNA; Biology; Gene; Genomics; Sequence homology; Genetics; Computer science; Base sequence","score_opus":0.0150946936232665,"score_gpt":0.3340835541153689,"score_spread":0.3189888604921024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415121392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6783509,0.0021992302,0.31895807,0.00005073906,0.00003148895,0.00019003177,0.000012167943,0.0000026618252,0.00020467916],"genre_scores_gemma":[0.6500781,0.00015823558,0.3496258,0.000045175708,0.0000103028015,0.000028515058,0.000014825931,0.000013225693,0.000025833235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982237,0.00076735026,0.00032152227,0.00034889308,0.00007342191,0.00026511273],"domain_scores_gemma":[0.99933875,0.000091418115,0.00016122132,0.00027273482,0.00008520097,0.00005067966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000614759,0.00017327454,0.00037967335,0.00011238002,0.000025436106,0.0000063925854,0.0002256575,0.00028580005,0.000037207465],"category_scores_gemma":[0.00018202853,0.00013640708,0.000048881615,0.00012961887,0.0003845184,0.0000042977763,0.00012884357,0.00011604434,3.195266e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007056855,0.000022766319,0.012573466,0.000035681333,0.00006711662,0.0000018096476,0.000054982793,0.000010649777,0.9638855,0.00087319384,0.000011729253,0.022392545],"study_design_scores_gemma":[0.00043670327,0.0006475555,0.0018049303,0.000021566133,0.000011590318,0.00001786044,0.00010487003,0.000016886153,0.9921112,0.0044596116,0.00021946504,0.00014775629],"about_ca_topic_score_codex":0.00017413535,"about_ca_topic_score_gemma":0.000019481584,"teacher_disagreement_score":0.030667718,"about_ca_system_score_codex":0.000006054918,"about_ca_system_score_gemma":0.000049815513,"threshold_uncertainty_score":0.55625194},"labels":[],"label_agreement":null},{"id":"W2415197840","doi":"10.1007/978-1-61779-204-5_2","title":"The Prohormone Theory and the Proprotein Convertases: It Is All About Serendipity","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Proprotein Convertases; Serendipity; Prohormone; Hormone; Biology; Endocrinology; Philosophy; Epistemology","score_opus":0.035155176768042765,"score_gpt":0.4116274615477353,"score_spread":0.3764722847796925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415197840","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000046282516,0.976465,0.019530004,0.00040277882,0.0002533354,0.0018455208,0.000038256043,0.000011996296,0.001448509],"genre_scores_gemma":[0.000003133784,0.9787423,0.018015256,0.0013008581,0.00007544219,0.0005946853,0.00006087979,0.000057710957,0.0011497162],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98997295,0.00784676,0.00071869354,0.0008354282,0.00007342924,0.00055272144],"domain_scores_gemma":[0.99804246,0.00044506314,0.0004067692,0.00097014086,0.00006787087,0.0000676892],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0053415066,0.0005968866,0.0012731077,0.0000673578,0.00024108725,0.000035106405,0.0007976293,0.0012799685,0.000017358825],"category_scores_gemma":[0.00090325676,0.00027325007,0.00045745907,0.00016877244,0.001999046,0.0000014338294,0.0008247972,0.0008783255,0.000009560258],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000266068,0.000050831648,0.000003589936,0.0010916046,0.0020412274,0.0000115023595,0.0002503013,3.5803758e-8,0.0013846684,0.02277622,0.0010306312,0.9710933],"study_design_scores_gemma":[0.0005850555,0.00016120197,0.00000146285,0.00023758631,0.00080536114,0.000066761895,0.00005810644,0.0000011754635,0.0021644519,0.006385088,0.9891498,0.00038395822],"about_ca_topic_score_codex":0.000043126598,"about_ca_topic_score_gemma":0.000021021591,"teacher_disagreement_score":0.9881192,"about_ca_system_score_codex":0.000018992168,"about_ca_system_score_gemma":0.00013388351,"threshold_uncertainty_score":0.999972},"labels":[],"label_agreement":null},{"id":"W2415199423","doi":"10.1007/978-1-62703-083-0_18","title":"Vector-Free Methods for Manipulating miRNA Activity In Vitro and In Vivo","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"microRNA; In vivo; Computational biology; Context (archaeology); In vitro; Workflow; Function (biology); Biology; Computer science; Gene; Cell biology; Biotechnology; Genetics","score_opus":0.031186954869128387,"score_gpt":0.40844139030135274,"score_spread":0.37725443543222437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415199423","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47798747,0.0019844105,0.51940995,0.000054625463,0.00012241697,0.00034466878,0.000009814888,0.0000055505625,0.000081052356],"genre_scores_gemma":[0.3646608,0.000022705017,0.6350077,0.00008272373,0.000055218337,0.0001133065,0.000022036307,0.000024865043,0.0000106494945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99662745,0.0019755478,0.00034127125,0.00048617373,0.000039234415,0.0005303321],"domain_scores_gemma":[0.999092,0.00021877,0.000118485885,0.0004599369,0.000027566874,0.00008327309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028246266,0.00022248035,0.00034746333,0.00021245897,0.000026999625,0.0000093534945,0.00020964789,0.00039088627,0.0000072048],"category_scores_gemma":[0.0013773149,0.00023721853,0.00008761607,0.00020674396,0.00009405094,0.000008342889,0.00027155655,0.00016120887,2.483481e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025371453,0.00007980312,0.011236154,0.00004122922,0.000018439998,0.0000016788034,0.00003836489,0.000035687957,0.9602065,0.00022293672,0.0000059331633,0.027859531],"study_design_scores_gemma":[0.0010721294,0.00006150361,0.020616096,0.00001368639,0.000012047211,0.000009763861,0.000016744481,0.0012524425,0.9730885,0.0019760213,0.0016303278,0.0002507095],"about_ca_topic_score_codex":0.000066764056,"about_ca_topic_score_gemma":0.000046210553,"teacher_disagreement_score":0.1155977,"about_ca_system_score_codex":0.00006666904,"about_ca_system_score_gemma":0.00003524205,"threshold_uncertainty_score":0.96734905},"labels":[],"label_agreement":null},{"id":"W2415223489","doi":"10.1007/978-1-4939-3387-7_37","title":"Methods and Protocols for Developing Prion Vaccines","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Immunogenicity; Epitope; Immune system; Computational biology; Virology; Biology; Immunology; Antibody","score_opus":0.03903154180356549,"score_gpt":0.47838562051085204,"score_spread":0.43935407870728654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415223489","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015080305,0.0033781794,0.9773481,0.000566374,0.000081114995,0.0034904422,0.000009400578,0.000014434056,0.00003165248],"genre_scores_gemma":[0.0019105636,0.00046101504,0.99251544,0.0004317402,0.00007703218,0.004513001,0.000013007013,0.000028248145,0.000049944392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978316,0.000967838,0.00029824983,0.0005387602,0.00003211971,0.00033145177],"domain_scores_gemma":[0.999277,0.0001751357,0.00010110804,0.00031339144,0.0000694423,0.00006393655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017909347,0.00018641111,0.00025041754,0.000089511865,0.000053670676,0.000014036854,0.0001998645,0.00024950586,0.000008553618],"category_scores_gemma":[0.0015636653,0.00013486347,0.00009093176,0.00009368274,0.000071376504,0.0000036176532,0.00021370409,0.000050327406,6.325309e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007467671,0.000007606245,0.0012233558,0.000023996272,0.000017221586,7.0084616e-7,0.000004529954,4.539872e-7,0.6037803,0.0019033796,0.0000128296215,0.39295092],"study_design_scores_gemma":[0.0009781909,0.00024053465,0.0006546353,0.000053858286,0.000009258043,0.000009846828,0.0000067768583,0.000024310542,0.88004696,0.021112569,0.09662817,0.00023488145],"about_ca_topic_score_codex":0.000004195259,"about_ca_topic_score_gemma":0.000003395477,"teacher_disagreement_score":0.39271605,"about_ca_system_score_codex":0.00001919999,"about_ca_system_score_gemma":0.000074364536,"threshold_uncertainty_score":0.5499573},"labels":[],"label_agreement":null},{"id":"W2415228016","doi":"10.1007/978-1-4939-1261-2_18","title":"A Markerless Deletion Method for Genetic Manipulation of Burkholderia cenocepacia and Other Multidrug-Resistant Gram-Negative Bacteria","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Cystic Fibrosis Trust","keywords":"Burkholderia cenocepacia; Biology; Burkholderia; Multiple drug resistance; Homing endonuclease; Burkholderia cepacia complex; Microbiology; Bacteria; Genetics; Computational biology; Gene; Drug resistance; Genome","score_opus":0.025668434038220413,"score_gpt":0.3969828357923298,"score_spread":0.3713144017541094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415228016","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32679912,0.0002259111,0.6722857,0.000056270106,0.0000737121,0.00045180746,0.000038552458,0.0000061253418,0.00006281531],"genre_scores_gemma":[0.14716169,0.00005367533,0.85233444,0.00011479919,0.00005684544,0.00016058589,0.000052754192,0.00003628403,0.000028946675],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965603,0.0020085375,0.00042071825,0.0005746058,0.0000706618,0.00036518314],"domain_scores_gemma":[0.99900204,0.00024839074,0.00019354692,0.00035179078,0.0001409951,0.00006325866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016766756,0.00023720712,0.0004227388,0.00013702517,0.00005564365,0.000014819165,0.00017383734,0.00026890068,0.000009581325],"category_scores_gemma":[0.0013951777,0.00022210482,0.00010308136,0.0001244671,0.00021456582,0.000003193294,0.00018481853,0.000087433735,3.76591e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043451626,0.000036153513,0.0021555582,0.00008159131,0.00009042799,6.520546e-7,0.00007520759,0.000028793671,0.9776228,0.00087707775,0.000009716855,0.018587494],"study_design_scores_gemma":[0.0016509714,0.0006155801,0.029982407,0.00002919788,0.000039037495,0.0000074178456,0.000070712034,0.0040112273,0.95134825,0.0061067846,0.0058291107,0.00030932663],"about_ca_topic_score_codex":0.00013157509,"about_ca_topic_score_gemma":0.00007892769,"teacher_disagreement_score":0.18004873,"about_ca_system_score_codex":0.000022785987,"about_ca_system_score_gemma":0.00002995742,"threshold_uncertainty_score":0.9057172},"labels":[],"label_agreement":null},{"id":"W2415228087","doi":"10.1007/978-1-60761-629-0_9","title":"Detection of Antisense RNA Transcripts by Strand-Specific RT-PCR","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University; Sunnybrook Health Science Centre; University of Toronto; Health Sciences Centre","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Sense strand; Sense (electronics); Biology; Antisense RNA; Complementary DNA; Computational biology; RNA; Molecular biology; Genetics; Gene; Chemistry","score_opus":0.018425720737226394,"score_gpt":0.3647582466112952,"score_spread":0.3463325258740688,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415228087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56214046,0.00084295345,0.4363953,0.00005081007,0.0001771492,0.00012584752,0.00001114912,0.000005636296,0.00025067522],"genre_scores_gemma":[0.8698472,0.00031536142,0.1294863,0.000081792925,0.00005401159,0.00001357206,0.000047198962,0.000024946317,0.00012965658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823695,0.00053508836,0.0003263289,0.00043657765,0.00008672875,0.0003783382],"domain_scores_gemma":[0.99930274,0.00003217058,0.0000755726,0.00042536843,0.00007099839,0.00009317211],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011762684,0.00017004306,0.00026167673,0.00012569784,0.000039816987,0.000009803922,0.0002529666,0.00038730854,0.000024173236],"category_scores_gemma":[0.00015879153,0.00016226566,0.00013186462,0.00018436828,0.00022266514,0.000002748362,0.000052180123,0.00035340013,0.0000018358318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009404537,0.000053800348,0.0005951344,0.0000116973415,0.000026373265,0.000007622199,0.00001476305,0.0000040772534,0.94715184,0.00021169525,0.00004905721,0.0517799],"study_design_scores_gemma":[0.0007130293,0.00034266044,0.0006442482,0.0000048744178,0.000005497641,0.000019852987,0.000017923563,0.00007178765,0.9875289,0.00041127764,0.010079533,0.00016042464],"about_ca_topic_score_codex":0.000102176105,"about_ca_topic_score_gemma":0.00009963855,"teacher_disagreement_score":0.30770668,"about_ca_system_score_codex":0.0000078771845,"about_ca_system_score_gemma":0.000035810044,"threshold_uncertainty_score":0.6617002},"labels":[],"label_agreement":null},{"id":"W2415331273","doi":"10.1007/978-1-4939-0329-0_7","title":"Measuring Microtubule Growth and Gliding in Caenorhabditis elegans Embryos","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Caenorhabditis elegans; Microtubule; Embryo; Biology; Cell biology; Genetics; Gene","score_opus":0.01742896393516353,"score_gpt":0.3031805635761575,"score_spread":0.285751599640994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415331273","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50262755,0.0010639274,0.49535033,0.00014674773,0.00016029498,0.00015639172,0.0000032850646,0.000010842364,0.00048061876],"genre_scores_gemma":[0.6791042,0.00022735416,0.31996152,0.0004891962,0.000087942004,0.000028563454,0.00002327213,0.000037880985,0.000040062674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99719733,0.0011517771,0.0003765863,0.0006904454,0.00007125853,0.00051257963],"domain_scores_gemma":[0.99930924,0.00006632838,0.0000866717,0.00039985508,0.000044141827,0.000093749615],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013784337,0.00026598384,0.00036268734,0.00019879974,0.000057992107,0.000025762793,0.00029245456,0.00036484262,0.0000063423013],"category_scores_gemma":[0.0007077893,0.0002878371,0.00007319194,0.00016150443,0.00016837362,0.0000037363734,0.00025308435,0.00025228385,0.0000025702893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016378333,0.000034870118,0.022001756,0.000034793753,0.00001857405,0.000009346724,0.00017911098,0.00008120576,0.9725123,0.0009078611,0.000010489279,0.0041932794],"study_design_scores_gemma":[0.00081015984,0.00023759707,0.0049145496,0.000023394232,0.000014369157,0.000045931985,0.000053109306,0.00038249616,0.9860234,0.0046549677,0.0024544783,0.0003854963],"about_ca_topic_score_codex":0.00021962097,"about_ca_topic_score_gemma":0.00020115322,"teacher_disagreement_score":0.17647664,"about_ca_system_score_codex":0.000022125865,"about_ca_system_score_gemma":0.000037528407,"threshold_uncertainty_score":0.9999574},"labels":[],"label_agreement":null},{"id":"W2415336889","doi":"10.1007/978-1-60761-938-3_24","title":"Integrated Platform for Brain Imaging and Drug Delivery Across the Blood–Brain Barrier","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanoparticle-Based Drug Delivery","field":"Materials Science","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"Canadian Institutes of Health Research","keywords":"Biodistribution; Drug delivery; Blood–brain barrier; Nanocarriers; Medicine; Drug; Molecular imaging; Transcytosis; Drug delivery to the brain; In vivo; Neuroimaging; Pharmacokinetics; Pharmacology; Central nervous system; Biomedical engineering; Receptor; Nanotechnology; Internal medicine; Materials science; Biology","score_opus":0.013905998605352236,"score_gpt":0.34668479110446904,"score_spread":0.3327787924991168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415336889","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8022362,0.00030503792,0.19435772,0.0020428903,0.000539366,0.00037968784,0.0000625126,0.000048425678,0.000028132945],"genre_scores_gemma":[0.3230437,0.0000054753737,0.67231125,0.0042662215,0.000069827765,0.00015911437,0.000015964046,0.00003829323,0.000090157606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974076,0.0009125179,0.00037978723,0.00054000056,0.0000812952,0.00067876966],"domain_scores_gemma":[0.9968507,0.002356749,0.00010957262,0.00048597466,0.000096384676,0.00010060528],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0070265266,0.00022107868,0.00029676568,0.00008493912,0.00018948135,0.0000908216,0.00045500413,0.00014266226,0.00006805363],"category_scores_gemma":[0.0026674892,0.00015718503,0.00007934553,0.00022248593,0.0006502406,0.000104887375,0.00026365873,0.00035609258,0.00000819609],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006256915,0.000028366454,0.0010107388,0.000009199006,0.0000095891355,0.00001695953,0.00045326827,0.000007953081,0.97603524,0.0021310023,0.0001516924,0.020083413],"study_design_scores_gemma":[0.00090648135,0.000046945745,0.00009362819,0.00000917591,0.000017535995,0.000035685247,0.00031376045,0.0021590386,0.97808206,0.011165532,0.0069593084,0.0002108579],"about_ca_topic_score_codex":0.0002599353,"about_ca_topic_score_gemma":0.0002766081,"teacher_disagreement_score":0.47919253,"about_ca_system_score_codex":0.000022815608,"about_ca_system_score_gemma":0.00008548565,"threshold_uncertainty_score":0.640982},"labels":[],"label_agreement":null},{"id":"W2415378790","doi":"10.1007/978-1-59745-102-4_25","title":"Analysis of Interactions Between Viral Replicase Proteins and Plant Intracellular Membranes","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"RNA-dependent RNA polymerase; Intracellular; Membrane; Virology; Cell biology; Chemistry; Biology; Biochemistry; RNA; Gene","score_opus":0.07318757234635928,"score_gpt":0.388641179586922,"score_spread":0.3154536072405627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415378790","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99036545,0.00068797224,0.008071136,0.00026124957,0.000016422553,0.00018915307,0.00031711656,0.000015590811,0.00007588824],"genre_scores_gemma":[0.92240024,0.0005972756,0.07651553,0.00006800421,0.00004219589,0.000062384825,0.00026690876,0.0000012586756,0.000046197427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824566,0.00087010267,0.00027477116,0.00030873407,0.00007636757,0.00022436205],"domain_scores_gemma":[0.99898356,0.0007617259,0.000085233405,0.00008083089,0.000034483925,0.000054134805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071008096,0.00010861169,0.00042275357,0.00011314985,0.000089458925,0.000005048027,0.00015673731,0.000086184635,0.00004274815],"category_scores_gemma":[0.00048728593,0.00004586038,0.000097837255,0.000680489,0.00025262398,0.000026128762,0.0001521072,0.00016572328,9.306006e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021445036,0.0000326691,0.03010674,0.000004902526,0.00022327756,0.00004157376,0.00006324373,0.0000045249394,0.9564441,0.000105971834,0.000004187222,0.012947403],"study_design_scores_gemma":[0.00015766648,0.00032235714,0.14268014,0.000010833187,0.00018771815,0.00003540436,0.00008917944,0.00060731824,0.8480781,0.00081170554,0.00679314,0.00022646842],"about_ca_topic_score_codex":0.0007824983,"about_ca_topic_score_gemma":0.00030199936,"teacher_disagreement_score":0.1125734,"about_ca_system_score_codex":0.000012469413,"about_ca_system_score_gemma":0.00000542936,"threshold_uncertainty_score":0.1870132},"labels":[],"label_agreement":null},{"id":"W2415380589","doi":"10.1007/978-1-4939-2297-0_19","title":"Methods to Study Primary Tumor Cells and Residual Tumor Cells in Mouse Models of Oncogene Dependence","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Oncogene; Genetically modified mouse; Transgene; Transactivation; Cancer research; Biology; Somatic cell; Tetracycline; Minimal residual disease; Cancer; Immunology; Gene; Gene expression; Genetics; Cell cycle","score_opus":0.049829743994626044,"score_gpt":0.4309482721025678,"score_spread":0.3811185281079418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415380589","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7475861,0.0016181218,0.24968222,0.000024711813,0.00007618504,0.0007516657,0.00007480652,0.000006080321,0.00018014923],"genre_scores_gemma":[0.21085438,0.000071237126,0.78848875,0.00026371342,0.000025271484,0.0001663619,0.000034965156,0.00003379973,0.00006153688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950991,0.0029957704,0.00047551395,0.00077667553,0.00016133192,0.0004916072],"domain_scores_gemma":[0.9988573,0.0001025595,0.00010944754,0.0005802131,0.000105713865,0.00024476426],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0029623124,0.00026287502,0.0005220816,0.00026176622,0.000022651207,0.000012608015,0.0003696979,0.00014157387,0.000003983074],"category_scores_gemma":[0.0003177035,0.00024767272,0.0000633252,0.0002943281,0.00013538517,0.000006149407,0.0006271926,0.00019352566,0.0000020603318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005008072,0.0004156785,0.0027588145,0.000018522047,0.00007184766,0.00013626083,0.00020831467,0.00061000785,0.98440546,0.000029041606,0.000022700637,0.010822518],"study_design_scores_gemma":[0.0020052742,0.001645834,0.0002774104,0.000009052737,0.000017908922,0.000018072426,0.0002124432,0.00014300116,0.99354917,0.0015112666,0.00038019396,0.00023034646],"about_ca_topic_score_codex":0.00084007095,"about_ca_topic_score_gemma":0.00035612457,"teacher_disagreement_score":0.5388065,"about_ca_system_score_codex":0.00007994951,"about_ca_system_score_gemma":0.00024977056,"threshold_uncertainty_score":0.99999756},"labels":[],"label_agreement":null},{"id":"W2415392799","doi":"10.1007/978-1-59745-396-7_18","title":"Stable Lentiviral Vector-Mediated Gene Silencing in Human Monocytic Cell Lines","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Vesicular stomatitis virus; Gene silencing; Small hairpin RNA; Viral vector; Biology; Vector (molecular biology); Virology; RNA interference; Cell culture; RNA silencing; Gene; Cell biology; Virus; RNA; Genetics","score_opus":0.03131465133385249,"score_gpt":0.40005789942631487,"score_spread":0.3687432480924624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415392799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92650783,0.0034065254,0.06896991,0.00010972393,0.00010636492,0.0003266754,0.000009985117,0.000020609194,0.00054235855],"genre_scores_gemma":[0.92066705,0.000251582,0.07793325,0.0005885114,0.00010455153,0.000047599922,0.00018995754,0.00004267923,0.00017482963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99623317,0.0016830853,0.00047615462,0.0007380213,0.00011554372,0.0007540299],"domain_scores_gemma":[0.9990665,0.00006213193,0.00009985243,0.00061219017,0.00006410979,0.00009524954],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016394678,0.00029727715,0.00039882617,0.00033026582,0.000058464444,0.000019988773,0.00047173948,0.0004129031,0.00003279331],"category_scores_gemma":[0.00023588055,0.00030676767,0.00012231054,0.00045194407,0.00012187007,0.0000048405304,0.00014965699,0.0003600428,0.000008452111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030738252,0.00015797523,0.0011498579,0.000010294523,0.000017837225,0.00004386785,0.000053916465,0.00056304655,0.99288106,0.00004781596,0.00001832384,0.0047486136],"study_design_scores_gemma":[0.0013129609,0.0022181016,0.00083466736,0.0000108340355,0.0000062812887,0.0000048444595,0.00003083528,0.000470264,0.9930352,0.0013762952,0.00037882323,0.00032090177],"about_ca_topic_score_codex":0.00010506335,"about_ca_topic_score_gemma":0.00015885469,"teacher_disagreement_score":0.008963338,"about_ca_system_score_codex":0.00008389613,"about_ca_system_score_gemma":0.00013280577,"threshold_uncertainty_score":0.9999384},"labels":[],"label_agreement":null},{"id":"W2415436583","doi":"10.1007/978-1-4939-3191-0_12","title":"Cancer Gastric Chemoprevention: Isolation of Gastric Tumor-Initiating Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre","funders":"","keywords":"Cancer; Medicine; Disease; Isolation (microbiology); Cancer research; Oncology; Cancer stem cell; Internal medicine; Bioinformatics; Biology","score_opus":0.053712637401512366,"score_gpt":0.4221336106822214,"score_spread":0.368420973280709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415436583","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.080936804,0.0029450697,0.9135661,0.00012773492,0.00036335015,0.0002552548,0.000009069758,0.000015097284,0.0017815273],"genre_scores_gemma":[0.07111763,0.00011230135,0.9282378,0.00029224285,0.00008741644,0.000038981434,0.000016604732,0.000017653807,0.00007937374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985294,0.0004944538,0.00039095298,0.00025357038,0.000098757424,0.00023289496],"domain_scores_gemma":[0.99928826,0.00007453292,0.00019542065,0.00021603533,0.00012910119,0.00009665785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001175834,0.00012315995,0.0003996056,0.00023992223,0.000012029658,0.0000030541792,0.00007340692,0.00008682807,0.00012294004],"category_scores_gemma":[0.00028790152,0.000114122275,0.00010870335,0.0005900239,0.000059949045,0.000019703513,0.0000522449,0.00016592027,0.0000029598564],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075442746,0.000068864676,0.010965576,0.000060669958,0.00003844264,0.000019943638,0.00007497038,0.000111682624,0.9322723,0.00012266073,0.000059162758,0.056130294],"study_design_scores_gemma":[0.0023100511,0.00048816885,0.0013808701,0.00010543753,0.00017079452,0.00007973898,0.00015156828,0.00083661714,0.9889194,0.0021825281,0.0032073727,0.00016746062],"about_ca_topic_score_codex":0.00022123383,"about_ca_topic_score_gemma":0.000009132885,"teacher_disagreement_score":0.056647103,"about_ca_system_score_codex":0.000108769855,"about_ca_system_score_gemma":0.00019338256,"threshold_uncertainty_score":0.46537712},"labels":[],"label_agreement":null},{"id":"W2415443593","doi":"10.1007/978-1-4939-3684-7_14","title":"Expansion of NK Cells Using Genetically Engineered K562 Feeder Cells","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"National Research Foundation of Korea; Korea Research Institute of Bioscience and Biotechnology","keywords":"Genetically engineered; K562 cells; Cell biology; Biology; Cell; Genetics; Gene","score_opus":0.019887352275332126,"score_gpt":0.32851424492665265,"score_spread":0.30862689265132054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415443593","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14724565,0.0010265445,0.8480912,0.000054143773,0.0030164097,0.00014618086,0.0000035207124,0.000024232479,0.00039213258],"genre_scores_gemma":[0.26997966,0.00032424094,0.7264413,0.0004080036,0.000036016016,0.000021393185,0.00002489901,0.000052389707,0.0027120984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975441,0.0013202155,0.00046465808,0.00032653383,0.000019984367,0.00032447305],"domain_scores_gemma":[0.9991335,0.00030325356,0.00013421293,0.0003285161,0.00008289498,0.000017565912],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006100161,0.00017809913,0.00035026952,0.00023801185,0.00003362515,0.0000030032077,0.00017058206,0.00043680775,0.0010137425],"category_scores_gemma":[0.00016997424,0.00012993057,0.00012588839,0.00014448007,0.00019531445,0.000029842697,0.0000911125,0.0001907019,0.00009507556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105147825,0.000051191255,0.000061028244,0.00000995318,0.000054305492,0.000002495198,0.000045377674,0.000042940497,0.98233414,0.00050130417,0.0001077464,0.016684392],"study_design_scores_gemma":[0.0008526192,0.00019745808,0.00006193048,0.000038039314,0.000022364107,0.00001873949,0.00003438557,0.000062855215,0.9858296,0.00032210263,0.012401504,0.00015843776],"about_ca_topic_score_codex":0.000047449226,"about_ca_topic_score_gemma":9.679884e-7,"teacher_disagreement_score":0.122733995,"about_ca_system_score_codex":0.000046871784,"about_ca_system_score_gemma":0.000041072806,"threshold_uncertainty_score":0.99989945},"labels":[],"label_agreement":null},{"id":"W2415495119","doi":"10.1007/978-1-62703-251-3_10","title":"Functional Analysis of Human D1 and D5 Dopaminergic G Protein-Coupled Receptors: Lessons from Mutagenesis of a Conserved Serine Residue in the Cytosolic End of Transmembrane Region 6","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Adenylyl cyclase; Biology; HEK 293 cells; G protein; Receptor; Molecular biology; Biochemistry; Cell biology","score_opus":0.036922780966832505,"score_gpt":0.3497988693918441,"score_spread":0.31287608842501163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415495119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85130525,0.0016705268,0.14663123,0.0000799262,0.00003938812,0.00022197138,0.000022244716,0.0000021240855,0.000027375545],"genre_scores_gemma":[0.9490892,0.000113000446,0.050456896,0.000039855717,0.000030519815,0.000050437357,0.00018939898,0.000014413223,0.000016227594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99730116,0.0014751174,0.00057825906,0.00032046845,0.00009675911,0.00022824279],"domain_scores_gemma":[0.9991304,0.00012769597,0.00026893185,0.00036712296,0.00006725789,0.00003856416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015403745,0.00017670737,0.00057673367,0.00028090415,0.000024946607,0.0000029595544,0.00019824498,0.00027078346,0.00007303865],"category_scores_gemma":[0.00015233319,0.00014071765,0.00018946873,0.00052360416,0.00022295136,0.0000041072963,0.000061975385,0.00011215736,6.177062e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015899214,0.00012533837,0.008493856,0.00003890163,0.00032939398,0.0000020219004,0.00023491302,0.00015949967,0.98828346,0.0013370508,0.0000011341752,0.0008354728],"study_design_scores_gemma":[0.00067878165,0.00030917543,0.010437131,0.000023968807,0.0002028493,0.000004086523,0.00020967658,0.0001518173,0.987098,0.0007034754,0.00004872864,0.00013232528],"about_ca_topic_score_codex":0.00093096175,"about_ca_topic_score_gemma":0.00028556344,"teacher_disagreement_score":0.09778403,"about_ca_system_score_codex":0.000008231404,"about_ca_system_score_gemma":0.000034852765,"threshold_uncertainty_score":0.5738299},"labels":[],"label_agreement":null},{"id":"W2415535713","doi":"10.1007/978-1-60761-697-9_5","title":"Metronomic PDT and Cell Death Pathways","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photodynamic Therapy Research Studies","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Juravinski Cancer Centre","funders":"National Cancer Institute","keywords":"Apoptosis; Programmed cell death; U87; Cancer research; Cell culture; Cell; Glioma; Medicine; Chemistry; Cell biology; Pharmacology; Biology; Biochemistry; Genetics","score_opus":0.02917469070361648,"score_gpt":0.4169584407151416,"score_spread":0.3877837500115251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415535713","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88446987,0.00089116255,0.11163701,0.00021081588,0.0001332113,0.00025783628,0.000004719473,0.000023232997,0.0023721447],"genre_scores_gemma":[0.34770393,0.0001369975,0.6517077,0.0002764109,0.000027346921,0.000039462226,0.000005671888,0.000016202503,0.000086275984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987048,0.00044159638,0.00017367772,0.0003144515,0.000047322108,0.00031817824],"domain_scores_gemma":[0.99927646,0.00026549844,0.000035292258,0.00030385616,0.000028305549,0.00009058329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012637106,0.00013130579,0.00034129477,0.00018979351,0.000030941745,0.0000052211994,0.000104694096,0.00015316482,0.000052213163],"category_scores_gemma":[0.00047868985,0.000105957384,0.00005555959,0.000112903275,0.0002004517,0.000010739476,0.00014012783,0.00048344766,0.0000047311205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049556784,0.000045844783,0.007932127,0.000015465394,0.00003346553,0.000046829125,0.00007276903,2.1605842e-7,0.97173697,0.0018043634,0.000004444396,0.01825796],"study_design_scores_gemma":[0.0016154516,0.0004468384,0.021928608,0.0000083024825,0.000027229064,0.00005852764,0.00006314128,0.00044892964,0.95849943,0.012774232,0.0039597326,0.00016959537],"about_ca_topic_score_codex":0.000062927524,"about_ca_topic_score_gemma":0.000021063446,"teacher_disagreement_score":0.5400707,"about_ca_system_score_codex":0.000032190517,"about_ca_system_score_gemma":0.000053127733,"threshold_uncertainty_score":0.43208167},"labels":[],"label_agreement":null},{"id":"W2415545400","doi":"10.1007/978-1-4939-2684-8_16","title":"Characterization of Phlorotannins from Brown Algae by LC-HRMS","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Seaweed-derived Bioactive Compounds","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Chromatography; Brown algae; Chemistry; Polyphenol; Hydrophilic interaction chromatography; Mass spectrometry; Algae; High-performance liquid chromatography; Botany; Biology; Organic chemistry","score_opus":0.04700509341219873,"score_gpt":0.34466353993008114,"score_spread":0.2976584465178824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415545400","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92288464,0.00026547158,0.07537289,0.0004755149,0.00022104512,0.00016696501,0.00011179759,0.000029922776,0.0004717216],"genre_scores_gemma":[0.84626186,0.00004352939,0.15136139,0.0008389774,0.00015218381,0.000045306944,0.00120134,0.0000041940684,0.000091216396],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797446,0.0010373414,0.00028957022,0.00036629988,0.00009460476,0.0002377289],"domain_scores_gemma":[0.99935716,0.00021275341,0.00015583265,0.00009798266,0.000090167305,0.000086108455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058875897,0.00015243451,0.00030577419,0.000024201658,0.00002458842,0.00001250725,0.00032107174,0.00022004062,0.000110031455],"category_scores_gemma":[0.0002751711,0.00006828203,0.000071563634,0.00035644553,0.00014967409,0.000045941742,0.00012775222,0.00012933265,0.000007126743],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031364543,0.000062577834,0.009423363,8.179161e-7,0.000015843147,0.0000022998179,0.00005773309,3.4921e-7,0.94229853,0.0001319816,0.000027605567,0.047947515],"study_design_scores_gemma":[0.00022571716,0.00027205187,0.033633936,0.000006537973,0.000008169704,0.0000014290736,0.00008710934,0.00006319684,0.9478175,0.0038444372,0.013874091,0.00016584115],"about_ca_topic_score_codex":0.0005612075,"about_ca_topic_score_gemma":0.000045477726,"teacher_disagreement_score":0.076622814,"about_ca_system_score_codex":0.000039028204,"about_ca_system_score_gemma":0.000011007856,"threshold_uncertainty_score":0.27844602},"labels":[],"label_agreement":null},{"id":"W2415601317","doi":"10.1007/978-1-4939-1755-6_15","title":"Examining the Effects of Nuclear GPCRs on Gene Expression Using Isolated Nuclei","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; McGill University; Université de Montréal; Montreal Heart Institute","funders":"Canadian Institutes of Health Research","keywords":"Transcriptome; Gene expression; Computational biology; Biology; Endogeny; Gene; Nuclear gene; Cell biology; Stimulation; Bioinformatics; Neuroscience; Genetics; Genome; Biochemistry","score_opus":0.024366345276489034,"score_gpt":0.3683807780152737,"score_spread":0.3440144327387847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415601317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65602344,0.00023812875,0.34329104,0.000022552347,0.000089054796,0.00014471769,8.2579044e-7,0.0000057671264,0.00018443937],"genre_scores_gemma":[0.71270096,0.000055860462,0.28664142,0.00044837123,0.00005937981,0.000010807996,0.000009726495,0.000037016696,0.00003644761],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969077,0.0020159623,0.00025240047,0.0003904746,0.00008692917,0.00034653585],"domain_scores_gemma":[0.9990045,0.00023856891,0.00010942454,0.0005452036,0.000042515505,0.000059813327],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012476256,0.0001633469,0.00024442145,0.00010132443,0.00007608506,0.000009774442,0.000345799,0.00024848487,0.000006656946],"category_scores_gemma":[0.0014339763,0.00011841759,0.00008118849,0.00015483222,0.0001627754,0.0000018685523,0.00023459023,0.00021265312,0.0000018519524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104852836,0.0000328671,0.0006218428,0.000023262888,0.00002472276,0.000005066608,0.0000331984,0.00018673572,0.9889431,0.0002567424,0.000015169877,0.009752439],"study_design_scores_gemma":[0.0004997235,0.0009637408,0.00038231924,0.000051240004,0.000008639522,0.0000081848475,0.000024724679,0.0036981534,0.99296683,0.00028468145,0.0009794699,0.00013229548],"about_ca_topic_score_codex":0.000031810414,"about_ca_topic_score_gemma":0.0000014019457,"teacher_disagreement_score":0.05667752,"about_ca_system_score_codex":0.0000143754505,"about_ca_system_score_gemma":0.000021714213,"threshold_uncertainty_score":0.48289293},"labels":[],"label_agreement":null},{"id":"W2415629568","doi":"10.1007/978-1-62703-330-5_3","title":"Isolation of Hair Follicle Bulge Stem Cells from YFP-Expressing Reporter Mice","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hair Growth and Disorders","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Clonogenic assay; Cell sorting; Stem cell; Hair follicle; Biology; Cell biology; Yellow fluorescent protein; Molecular biology; Population; Cell; Gene; Flow cytometry; Genetics; Medicine","score_opus":0.022211057941370092,"score_gpt":0.3598865925141286,"score_spread":0.3376755345727585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415629568","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45202488,0.00042725517,0.545934,0.00018142755,0.00010634215,0.00020508423,0.000002082196,0.000015992888,0.0011029176],"genre_scores_gemma":[0.3940601,0.000006870184,0.60530204,0.00048594907,0.000021001106,0.000021521844,0.000013619771,0.000013642346,0.000075230026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984434,0.00052673445,0.00043872418,0.00030117945,0.00006707268,0.00022286086],"domain_scores_gemma":[0.9992076,0.00017421508,0.00015254693,0.00032870332,0.00006509667,0.00007181504],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046396945,0.00012181109,0.00035617177,0.00012340701,0.000017251843,0.0000059576764,0.00008085214,0.0002097162,0.0001329077],"category_scores_gemma":[0.00014433559,0.00010639587,0.00009442997,0.00016463631,0.000083441635,0.00003692305,0.000047238267,0.00012777752,0.000012896976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003514619,0.000053550386,0.016727224,0.000021383985,0.00002851219,0.000013979966,0.00020365076,0.000009594943,0.96031207,0.00008248618,0.00007142148,0.022440989],"study_design_scores_gemma":[0.00098376,0.00015104425,0.004931052,0.00004303157,0.000037329148,0.000007401512,0.0002370196,0.0019157204,0.98606706,0.0045082537,0.0009921986,0.0001261389],"about_ca_topic_score_codex":0.0007071979,"about_ca_topic_score_gemma":0.000009300459,"teacher_disagreement_score":0.05936802,"about_ca_system_score_codex":0.000020951748,"about_ca_system_score_gemma":0.000039860908,"threshold_uncertainty_score":0.43386975},"labels":[],"label_agreement":null},{"id":"W2415670807","doi":"10.1007/978-1-4939-0835-6_9","title":"RNA Amplification for Pseudogene Detection Using RNA-Seq","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Ministry of Agriculture and Forestry; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"RNA; Pseudogene; Biology; Complementary DNA; Non-coding RNA; Computational biology; DNA; Molecular biology; DNA microarray; Genetics; Gene; Gene expression; Genome","score_opus":0.03488208414382578,"score_gpt":0.4174080180930585,"score_spread":0.38252593394923273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415670807","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10722807,0.00027375112,0.8912379,0.00012755807,0.0001396732,0.0005675667,0.000013123625,0.000034256835,0.00037807418],"genre_scores_gemma":[0.2548724,0.00004540448,0.7437944,0.00054201856,0.00012784806,0.0003680864,0.0001665254,0.0000398219,0.000043489414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977635,0.0007049518,0.00039571547,0.00070538843,0.000046397,0.0003840117],"domain_scores_gemma":[0.9989236,0.000057657824,0.00017477661,0.00066152646,0.00011264555,0.00006980353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001322221,0.00023373068,0.00026621707,0.00014482398,0.000109927656,0.000014021064,0.0003111447,0.0005227703,0.0000059668464],"category_scores_gemma":[0.00046925788,0.00024028665,0.00017093966,0.00020805607,0.00014800315,0.0000024505368,0.000116719864,0.00013813385,0.0000020574462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037695947,0.00003801858,0.00014774832,0.000009871185,0.000024605084,2.748178e-7,0.00000473227,0.0001269104,0.9408326,0.005468518,0.000013949587,0.053295087],"study_design_scores_gemma":[0.00041040493,0.0002980234,0.000090610134,0.000005502387,0.00002547938,0.000017253988,0.000007083654,0.0041651824,0.9538579,0.012929613,0.027924407,0.00026851334],"about_ca_topic_score_codex":0.000045044297,"about_ca_topic_score_gemma":0.000018840468,"teacher_disagreement_score":0.14764436,"about_ca_system_score_codex":0.000034480494,"about_ca_system_score_gemma":0.000038017588,"threshold_uncertainty_score":0.97986054},"labels":[],"label_agreement":null},{"id":"W2415803807","doi":"10.1007/978-1-61737-992-5_17","title":"MRI Phenotyping of Genetically Altered Mice","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":149,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Centre for Phenogenomics; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Phenotype; Computational biology; Biology; Genetic similarity; Genetically modified organism; Similarity (geometry); Set (abstract data type); Genetically engineered; Genetics; Computer science; Image (mathematics); Artificial intelligence; Gene; Medicine","score_opus":0.017153580763663637,"score_gpt":0.3857013743178055,"score_spread":0.36854779355414186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415803807","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17029436,0.00047389272,0.82670045,0.00017254656,0.00044714246,0.00013051028,0.0000037266707,0.000006703534,0.001770652],"genre_scores_gemma":[0.29874018,0.000076099925,0.7005787,0.000336861,0.00010269708,0.00003395986,0.000033684828,0.000018802477,0.0000789962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856555,0.00043925748,0.00031445408,0.00040588898,0.000052706215,0.00022213503],"domain_scores_gemma":[0.9992327,0.00002841737,0.00011559322,0.0004873796,0.00007697979,0.000058928923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006336629,0.00013145301,0.00018866021,0.0001027871,0.000021438085,0.0000052550363,0.00029928994,0.00029977932,0.000047366244],"category_scores_gemma":[0.00031340768,0.0001261628,0.0000823291,0.00015267493,0.00015808285,0.000001159921,0.00012590247,0.00018904974,0.000002476916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039181527,0.000039214043,0.0010057422,0.000008766704,0.000014856517,5.5483406e-7,0.000019570554,0.000024618315,0.9605472,0.002756198,0.000067405694,0.03547666],"study_design_scores_gemma":[0.00035669876,0.00007542798,0.0010787813,0.0000054213547,0.0000073024767,0.0000059539284,0.000018024204,0.00028669764,0.9681357,0.0024950576,0.027397191,0.00013770968],"about_ca_topic_score_codex":0.000011271387,"about_ca_topic_score_gemma":0.000015056711,"teacher_disagreement_score":0.12844582,"about_ca_system_score_codex":0.00000505113,"about_ca_system_score_gemma":0.00006511215,"threshold_uncertainty_score":0.514477},"labels":[],"label_agreement":null},{"id":"W2415804527","doi":"10.1007/978-1-4939-3043-2_11","title":"Recombinant Protein Production in Large-Scale Agitated Bioreactors Using the Baculovirus Expression Vector System","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Waterloo; Polytechnique Montréal; National Research Council Canada","funders":"","keywords":"Bioreactor; Recombinant DNA; Biochemical engineering; Biology; Process engineering; Biotechnology; Engineering; Biochemistry; Gene","score_opus":0.018827629073364497,"score_gpt":0.35074312873995184,"score_spread":0.33191549966658734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415804527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77760255,0.0006068003,0.22017042,0.00015273987,0.00074332487,0.0006028462,0.000013856064,0.000024925916,0.000082508996],"genre_scores_gemma":[0.94681543,0.00005118342,0.05251357,0.00008781663,0.0001272316,0.00022506232,0.000024620145,0.00004201507,0.00011309083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99630415,0.0019823865,0.00043996435,0.0007075978,0.00009008779,0.0004758269],"domain_scores_gemma":[0.99900705,0.00003202523,0.00018350549,0.0006255669,0.0000793241,0.00007253838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011939334,0.00025516134,0.00027807796,0.0001509872,0.00010267043,0.000016310365,0.00027177588,0.00033131425,0.000015889167],"category_scores_gemma":[0.0005341092,0.00014815158,0.00013365048,0.00030405473,0.00013631301,0.000008301509,0.00022561045,0.00016085757,0.0000041860335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013359226,0.00011469442,0.0048883967,0.000025679072,0.000016214926,0.00000905975,0.000042171494,0.00003919352,0.99229556,0.0000968809,0.00006050708,0.0022780376],"study_design_scores_gemma":[0.0007288121,0.00020803705,0.0009186431,0.00021435632,0.000009527045,0.0000206454,0.00013475421,0.00007599385,0.99500173,0.00041366034,0.0020256194,0.00024819444],"about_ca_topic_score_codex":0.00008576287,"about_ca_topic_score_gemma":0.000045456138,"teacher_disagreement_score":0.16921283,"about_ca_system_score_codex":0.00009746962,"about_ca_system_score_gemma":0.000072960785,"threshold_uncertainty_score":0.60414463},"labels":[],"label_agreement":null},{"id":"W2415819614","doi":"10.1007/978-1-61779-436-0_13","title":"Microspread Ovarian Cell Preparations for the Analysis of Meiotic Prophase Progression in Oocytes with Improved Recovery by Cytospin Centrifugation","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"","keywords":"Meiosis; Prophase; Biology; Oocyte; Homologous chromosome; Andrology; Cell biology; Histology; Embryo; Genetics; Medicine; Gene","score_opus":0.027785096720977738,"score_gpt":0.39291719546957876,"score_spread":0.36513209874860103,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415819614","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34178016,0.00107543,0.6553781,0.00015292306,0.000052247095,0.0014312929,0.000021352886,0.0000090306075,0.00009947488],"genre_scores_gemma":[0.48912302,0.000028402214,0.5103346,0.00007741649,0.000008354341,0.00024150293,0.00012440121,0.000008020896,0.000054255288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822086,0.00075244694,0.0003752772,0.00042668032,0.000034801746,0.00018992703],"domain_scores_gemma":[0.998993,0.00020774208,0.0001924603,0.00044158238,0.00013793666,0.000027275279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015373764,0.00012189913,0.000398686,0.00020841746,0.000034659985,0.0000024228775,0.00009990003,0.00019098044,0.000016809174],"category_scores_gemma":[0.00081047835,0.000066236506,0.00010306463,0.00063492486,0.00024027206,0.000023123534,0.00002650605,0.00014263495,2.2675995e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0050590048,0.00044898657,0.04534268,0.000032787666,0.00028340652,0.0000019932595,0.0003078484,0.000012637018,0.9394361,0.00005022427,0.000005426668,0.009018939],"study_design_scores_gemma":[0.0010834404,0.0008808567,0.09573142,0.000016138845,0.00052202307,0.00000202149,0.00005138611,0.0015423791,0.89931095,0.0006977892,0.00007982111,0.000081765735],"about_ca_topic_score_codex":0.00010799341,"about_ca_topic_score_gemma":0.000034848024,"teacher_disagreement_score":0.14734288,"about_ca_system_score_codex":0.000040778705,"about_ca_system_score_gemma":0.00007602138,"threshold_uncertainty_score":0.27010465},"labels":[],"label_agreement":null},{"id":"W2415828882","doi":"10.1007/978-1-4939-0473-0_41","title":"Signature-Tagged Mutagenesis","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Insertional mutagenesis; Mutagenesis; Biology; Virulence; Mutant; Phenotype; Gene; Genetics; Genome; Computational biology; Population; Medicine","score_opus":0.00983364260513052,"score_gpt":0.3328258186153264,"score_spread":0.32299217601019586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415828882","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26450208,0.0009203339,0.7318822,0.00040473504,0.0004876911,0.00019640877,0.000006944823,0.00003134212,0.0015682462],"genre_scores_gemma":[0.33663863,0.00013806402,0.6611168,0.0015291895,0.0001928076,0.00004640474,0.000092539696,0.00004373824,0.00020186925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99746084,0.0010375417,0.00032764074,0.0006607433,0.000054598928,0.00045863632],"domain_scores_gemma":[0.9990827,0.000041511157,0.00009823179,0.0006501442,0.000053366468,0.000074066505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010635153,0.00025131323,0.00032018346,0.00015533462,0.00004381924,0.000014122649,0.0004473939,0.00086564146,0.00003367042],"category_scores_gemma":[0.000545988,0.00023440144,0.00012795161,0.0002273509,0.00020417856,0.0000011027514,0.00028253364,0.0002241894,0.000010207981],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003931669,0.000039706796,0.0007174354,0.0000063612943,0.000027961494,0.0000035430367,0.0000056844697,0.000024809146,0.95042294,0.0025432878,0.000058739104,0.046110235],"study_design_scores_gemma":[0.00047996372,0.0004102108,0.00056602136,0.000004294106,0.0000116362135,0.00001566666,0.000006593971,0.00011291838,0.8842487,0.0037395365,0.11012844,0.0002760219],"about_ca_topic_score_codex":0.00001693989,"about_ca_topic_score_gemma":0.00002001608,"teacher_disagreement_score":0.1100697,"about_ca_system_score_codex":0.0000128237125,"about_ca_system_score_gemma":0.000035737154,"threshold_uncertainty_score":0.95586133},"labels":[],"label_agreement":null},{"id":"W2415845301","doi":"10.1007/978-1-59745-558-9_6","title":"Molecular Basis of RNA-Mediated Gene Regulation on the Adenine Riboswitch by Single-Molecule Approaches","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Riboswitch; RNA; Gene; Computational biology; Basis (linear algebra); Chemistry; Biology; Genetics; Non-coding RNA; Mathematics","score_opus":0.034122034384315374,"score_gpt":0.31090666380037074,"score_spread":0.27678462941605536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415845301","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34506077,0.0013423113,0.6502728,0.0013705351,0.00007903663,0.00046558413,0.000023599838,0.0000170512,0.0013683365],"genre_scores_gemma":[0.7609561,0.000070517024,0.23716421,0.0013285204,0.000047270078,0.00007783696,0.00023525575,0.000043578453,0.00007671802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961447,0.0019832691,0.0005470539,0.00069408986,0.00018315311,0.00044770172],"domain_scores_gemma":[0.99855405,0.00014867901,0.00027754687,0.00086140353,0.00007694709,0.00008135621],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014954275,0.00035284786,0.00042646687,0.00014517458,0.000060963845,0.000016300175,0.00053455424,0.00052002986,0.0000371889],"category_scores_gemma":[0.0009176875,0.00027926895,0.00021220391,0.00036964027,0.00017077419,0.0000036844215,0.00010029743,0.00016629606,0.0000043338273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014058001,0.0001817621,0.000033771783,0.000006760166,0.00006213884,0.000006653724,0.00002784561,0.00013053199,0.9786448,0.0037059966,0.00009377516,0.016965425],"study_design_scores_gemma":[0.0004466709,0.0009699517,0.00007258058,0.000018895103,0.00002742582,0.000009887989,0.000027318314,0.00028455327,0.99145204,0.005288759,0.0011044845,0.00029743262],"about_ca_topic_score_codex":0.000011947616,"about_ca_topic_score_gemma":0.0000015464573,"teacher_disagreement_score":0.41589534,"about_ca_system_score_codex":0.000029727626,"about_ca_system_score_gemma":0.00004651878,"threshold_uncertainty_score":0.99996597},"labels":[],"label_agreement":null},{"id":"W2415921859","doi":"10.1007/978-1-61779-465-0_19","title":"The Solvated Interaction Energy Method for Scoring Binding Affinities","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Affinities; Binding energy; Ligand (biochemistry); Binding constant; Binding affinities; Chemistry; Interaction energy; Scaling; Protein ligand; Computational chemistry; Molecular binding; Function (biology); Chemical physics; Binding site; Physics; Molecule; Atomic physics; Stereochemistry; Mathematics; Biology; Geometry","score_opus":0.033832936528146076,"score_gpt":0.38331228989163546,"score_spread":0.3494793533634894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415921859","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009050531,0.00074277027,0.987915,0.00003966608,0.0005891436,0.00018676624,0.0000075043463,0.000015869511,0.0014527927],"genre_scores_gemma":[0.027842617,0.00015617258,0.97119427,0.00026937405,0.0000846131,0.00018726407,0.00006749708,0.00003161038,0.00016657253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982355,0.0007044274,0.00028920855,0.00037789278,0.00003650576,0.0003564276],"domain_scores_gemma":[0.99926,0.00015708484,0.00012692525,0.0003505091,0.00006802511,0.000037448648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011293343,0.00017891849,0.00018869215,0.000093402996,0.00012920942,0.000017872406,0.00029586232,0.0002642492,0.000005038391],"category_scores_gemma":[0.00048170073,0.00013848594,0.0001232075,0.00012176755,0.00010574134,0.0000034622017,0.00015681336,0.0001268287,5.424046e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015287253,0.000011350708,0.0001806198,0.0000059036697,0.000058221278,0.0000020495963,0.000052905452,0.000019424382,0.90823436,0.023180066,0.000014498607,0.06808773],"study_design_scores_gemma":[0.0003268108,0.00025383523,0.000036026708,0.000008131611,0.000016600443,0.000020279125,0.00013728418,0.0011264005,0.94625205,0.030530335,0.021099867,0.00019237917],"about_ca_topic_score_codex":0.00010446362,"about_ca_topic_score_gemma":0.000108628104,"teacher_disagreement_score":0.06789535,"about_ca_system_score_codex":0.000020628526,"about_ca_system_score_gemma":0.00004065903,"threshold_uncertainty_score":0.5647293},"labels":[],"label_agreement":null},{"id":"W2415998998","doi":"10.1007/978-1-62703-691-7_4","title":"Medium-Throughput Production of Recombinant Human Proteins: Ligation-Independent Cloning","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Cloning (programming); Recombinant DNA; Throughput; Computational biology; Ligation; Protocol (science); Structural genomics; Human proteins; Computer science; Resolution (logic); Vector (molecular biology); Biology; Molecular biology; Genetics; Protein structure; Gene; Biochemistry; Artificial intelligence; Programming language; Medicine; Operating system","score_opus":0.04309481444004157,"score_gpt":0.44086268424125047,"score_spread":0.39776786980120893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2415998998","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9126251,0.0007450887,0.07866816,0.0044058342,0.0005817687,0.0014855352,0.000001009173,0.000028907138,0.0014586423],"genre_scores_gemma":[0.2646017,0.00011891306,0.7324995,0.00022853317,0.00013617205,0.00030360156,0.00004964152,0.000026566468,0.0020353806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997837,0.0007552551,0.00048227227,0.00037961508,0.00018818854,0.0003576629],"domain_scores_gemma":[0.9991815,0.000091278234,0.00012900114,0.00031115444,0.00019855394,0.00008850335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014955648,0.00014633,0.00041128718,0.00022790975,0.000055833,0.000006538014,0.00013984437,0.00017875948,0.00022074935],"category_scores_gemma":[0.00073941256,0.00011287501,0.00010115345,0.00027681456,0.00022059592,0.000040158735,0.00011829928,0.00036224147,0.000020078345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004289634,0.0001447278,0.0140553815,0.00011723184,0.000049204948,0.000016905244,0.00015550014,0.0000040317436,0.96150273,0.003126204,0.00007087962,0.020714322],"study_design_scores_gemma":[0.00055600994,0.0006893487,0.025908934,0.0001339665,0.000018091263,0.00006419829,0.000083040526,0.00009716312,0.94804585,0.022191046,0.002075929,0.00013639353],"about_ca_topic_score_codex":0.0014082317,"about_ca_topic_score_gemma":0.000026017471,"teacher_disagreement_score":0.6538313,"about_ca_system_score_codex":0.0000585104,"about_ca_system_score_gemma":0.00008885129,"threshold_uncertainty_score":0.46029094},"labels":[],"label_agreement":null},{"id":"W2416012929","doi":"10.1007/978-1-4939-3182-8_5","title":"Quantitation of Aldosterone in Serum or Plasma Using Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS)","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital; University of British Columbia Hospital","funders":"","keywords":"Chromatography; Liquid chromatography–mass spectrometry; Chemistry; Tandem mass spectrometry; Aldosterone; Mass spectrometry; Medicine; Internal medicine","score_opus":0.09156784679326133,"score_gpt":0.4246666391589328,"score_spread":0.3330987923656715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416012929","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6800338,0.0005396481,0.31853795,0.00032180452,0.000106562926,0.00018917173,0.0000018731671,0.000013846194,0.00025531193],"genre_scores_gemma":[0.44767106,0.000028566114,0.5520953,0.00014549543,0.000017745282,0.0000036624178,0.000010686345,0.000014057992,0.000013419018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99810994,0.000745357,0.00046905532,0.00027693986,0.00015015749,0.00024856697],"domain_scores_gemma":[0.99929184,0.0001425255,0.00013353139,0.0002255832,0.0001100787,0.00009645026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014130715,0.00014621856,0.00054115744,0.0007518973,0.000013382441,0.000003873344,0.00007854439,0.00025514633,0.000038839476],"category_scores_gemma":[0.00074217306,0.000118965756,0.00007907748,0.0008425942,0.00010839609,0.000033567278,0.000042977943,0.00018148913,0.0000028407285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006813771,0.00008322442,0.018352117,0.000026817583,0.000036612142,0.00012149761,0.00010848776,0.00007472363,0.9771984,0.001148283,0.000005226109,0.0021632395],"study_design_scores_gemma":[0.0071448744,0.0038246936,0.04698087,0.0002928738,0.00012457793,0.00041156376,0.0004509148,0.026520072,0.9082427,0.0041856808,0.0014251214,0.00039603104],"about_ca_topic_score_codex":0.00009033882,"about_ca_topic_score_gemma":0.000048968315,"teacher_disagreement_score":0.23355737,"about_ca_system_score_codex":0.00008858969,"about_ca_system_score_gemma":0.00013491133,"threshold_uncertainty_score":0.48512828},"labels":[],"label_agreement":null},{"id":"W2416013751","doi":"10.1007/978-1-61779-921-1_16","title":"Transgenic Expression of Therapeutic Proteins in Arabidopsis thaliana Seed","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sembiosys Genetics (Canada)","funders":"","keywords":"Arabidopsis thaliana; Transgene; Biotechnology; Genetically modified crops; Biology; Production (economics); Recombinant DNA; Computational biology; Biochemistry; Gene","score_opus":0.028808650840537627,"score_gpt":0.3721469043820314,"score_spread":0.3433382535414938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416013751","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4804815,0.0021737104,0.51651466,0.00006932378,0.000053659074,0.00030778698,0.000018479463,0.0000054510097,0.0003753992],"genre_scores_gemma":[0.7987799,0.000118393735,0.20075627,0.00011335532,0.000026367874,0.00011610507,0.00004429183,0.000015601352,0.000029733883],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983913,0.00060798146,0.00032432697,0.00028206108,0.000050541756,0.00034381956],"domain_scores_gemma":[0.9994592,0.00003313816,0.000074071184,0.00036063787,0.000017737293,0.0000552055],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074534706,0.00015061302,0.00024396343,0.000103424245,0.000017348353,0.0000023601442,0.00022754425,0.0002656723,0.000019791825],"category_scores_gemma":[0.00004358466,0.0001324704,0.00010091541,0.00019947527,0.00009646054,0.0000030016147,0.000037628583,0.00013414072,0.0000017477968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043666667,0.0001502828,0.019067436,0.000014313743,0.000016713122,5.114677e-7,0.000087881235,0.00002168239,0.97510064,0.000801696,0.0000025654529,0.004692601],"study_design_scores_gemma":[0.0004846393,0.000081035214,0.018519217,0.00001383502,0.0000109767325,0.0000051080133,0.00003803235,0.0000112858,0.9767381,0.000855015,0.0030925244,0.00015020744],"about_ca_topic_score_codex":0.000038678736,"about_ca_topic_score_gemma":0.00002825234,"teacher_disagreement_score":0.31829837,"about_ca_system_score_codex":0.000010338911,"about_ca_system_score_gemma":0.000033557844,"threshold_uncertainty_score":0.5401986},"labels":[],"label_agreement":null},{"id":"W2416021173","doi":"10.1007/978-1-62703-398-5_9","title":"Analyzing Protein–Ligand Interactions by Dynamic NMR Spectroscopy","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"NMR spectroscopy and applications","field":"Physics and Astronomy","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Nuclear magnetic resonance spectroscopy; Nuclear magnetic resonance; Chemistry; Ligand (biochemistry); Relaxation (psychology); Magnetization transfer; Pulse sequence; Transverse relaxation-optimized spectroscopy; Spectroscopy; Magnetization; Dispersion (optics); Two-dimensional nuclear magnetic resonance spectroscopy; Chemical physics; Fluorine-19 NMR; Analytical Chemistry (journal); Physics; Magnetic resonance imaging; Magnetic field; Optics; Chromatography","score_opus":0.008319933422540594,"score_gpt":0.4162781915463592,"score_spread":0.4079582581238186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416021173","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17304328,0.00009155856,0.8218658,0.0005105533,0.00004560227,0.00035798026,0.000012044279,0.000022499551,0.004050679],"genre_scores_gemma":[0.30788627,0.000002374947,0.6910904,0.000060275503,0.000034370878,0.00047181692,0.000052980842,0.000016483758,0.00038503567],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998807,0.00028366176,0.00024546206,0.00032741678,0.000028945933,0.0003074773],"domain_scores_gemma":[0.99946594,0.00006676839,0.00008997946,0.00029408082,0.000027089327,0.000056162633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019676154,0.00015076029,0.000210287,0.000095668795,0.000079175916,0.000035711957,0.00019237552,0.000050909333,0.00059721107],"category_scores_gemma":[0.000013720038,0.00014387799,0.00008168922,0.00026388498,0.00007718532,0.000056355373,0.000059071543,0.00028987147,0.000074679825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000018096143,0.000066183355,0.0021447751,0.0000017852025,0.000028702412,2.5474444e-7,0.000018696646,0.0000051213606,0.9684404,0.023477182,0.00010128204,0.0057137962],"study_design_scores_gemma":[0.00017325352,0.00003472667,0.00020312164,0.000008589028,0.000010883771,6.8454216e-7,0.00005490156,0.0009589076,0.86988527,0.12528768,0.0032221645,0.00015981616],"about_ca_topic_score_codex":0.00044515848,"about_ca_topic_score_gemma":0.000007584265,"teacher_disagreement_score":0.13484299,"about_ca_system_score_codex":0.00003783867,"about_ca_system_score_gemma":0.000021471113,"threshold_uncertainty_score":0.6539042},"labels":[],"label_agreement":null},{"id":"W2416037827","doi":"10.1007/978-1-59745-000-3_30","title":"Monitoring Protein Kinase A Activities Using Expressed Substrate in Live Cells","year":2006,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Protein kinase A; Epitope; Phosphorylation; Molecular biology; Kinase; Biochemistry; Biology; Intracellular; Chemistry; Antibody","score_opus":0.059065159349829865,"score_gpt":0.41325481902687927,"score_spread":0.3541896596770494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416037827","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009185597,0.79318637,0.196245,0.0000011625968,0.00037412695,0.000906137,0.000027120752,0.000012798369,0.000061713574],"genre_scores_gemma":[0.00010059536,0.5446135,0.45446193,0.000008412324,0.00022089238,0.00032203662,0.00008916182,0.00010707758,0.00007638177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99432516,0.0029244064,0.0008826731,0.0010623034,0.00010289992,0.0007025812],"domain_scores_gemma":[0.998786,0.00008628879,0.00041963806,0.0005955765,0.000037359623,0.000075140684],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013250472,0.00067739177,0.001530737,0.00040252242,0.000050261755,0.00004210031,0.00048821286,0.0012971305,0.00002105016],"category_scores_gemma":[0.00011845219,0.00065022154,0.00046005344,0.0003242803,0.00011094517,0.000004865633,0.00026852798,0.00061649655,0.000002506818],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013368111,0.000054134944,0.000009722074,0.0009634461,0.000048701746,0.000070411246,0.000016698485,0.000093439856,0.8399077,0.000033800414,9.654491e-7,0.15878761],"study_design_scores_gemma":[0.00031305858,0.00014449109,3.567802e-7,0.0028149225,0.00008071552,0.000014032207,0.000052645682,0.00003611857,0.92528814,0.00044483956,0.07008555,0.0007251612],"about_ca_topic_score_codex":0.00022615491,"about_ca_topic_score_gemma":0.00001646818,"teacher_disagreement_score":0.25821695,"about_ca_system_score_codex":0.00011600514,"about_ca_system_score_gemma":0.000264851,"threshold_uncertainty_score":0.9999994},"labels":[],"label_agreement":null},{"id":"W2416042901","doi":"10.1007/978-1-60761-459-3_5","title":"Quantification of Antidepressants Using Gas Chromatography-Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic Toxicology and Drug Analysis","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Office of the Chief Medical Examiner","funders":"","keywords":"Tricyclic; Chemistry; Monoamine oxidase; Antidepressant; Monoamine neurotransmitter; Chromatography; Gas chromatography–mass spectrometry; Mass spectrometry; Serotonin; Urine; Reuptake inhibitor; Tricyclic antidepressant; Pharmacology; Tranylcypromine; Medicine; Internal medicine; Biochemistry; Organic chemistry; Enzyme","score_opus":0.09816670552869945,"score_gpt":0.5111983080644411,"score_spread":0.41303160253574167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416042901","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38947907,0.0014951723,0.6068473,0.00022000846,0.0003682107,0.00016263858,0.000011803414,0.000035153396,0.0013806646],"genre_scores_gemma":[0.56993014,0.00012886354,0.42937687,0.00049170153,0.00002882768,0.0000048253314,0.000015546924,0.000009728118,0.000013475886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99521303,0.0031249113,0.00063616177,0.0004730696,0.000074798074,0.00047801548],"domain_scores_gemma":[0.99870634,0.00042891174,0.00030557287,0.00038833622,0.000076412565,0.00009442346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024675112,0.00023076775,0.00061053457,0.00072946824,0.00008686052,0.0000049455143,0.00033281447,0.0006834434,0.00030163486],"category_scores_gemma":[0.00040809828,0.00022755403,0.00022976697,0.0011238367,0.0004960374,0.00004252631,0.000040326813,0.00061298395,0.000007652088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011349761,0.0002228733,0.023567783,0.000012981379,0.00016296915,0.00003492412,0.000060541126,0.0012355002,0.9457966,0.013236199,0.00002446953,0.015531673],"study_design_scores_gemma":[0.0007777232,0.00019805325,0.005589894,0.000011271005,0.0001865119,0.000026115487,0.00004486552,0.009373603,0.94656724,0.036410306,0.00058196817,0.00023245315],"about_ca_topic_score_codex":0.000028549244,"about_ca_topic_score_gemma":0.0000049126193,"teacher_disagreement_score":0.18045108,"about_ca_system_score_codex":0.00003754065,"about_ca_system_score_gemma":0.000050740076,"threshold_uncertainty_score":0.9279384},"labels":[],"label_agreement":null},{"id":"W2416138934","doi":"10.1007/7651_2014_76","title":"Multiwell Plate Tools for Controlling Cellular Alignment with Grooved Topography","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Cytoskeleton; Microfabrication; Substrate (aquarium); Function (biology); Cell function; Nanotechnology; Biological system; Computer science; Cell; Materials science; Chemistry; Biology; Cell biology; Biochemistry","score_opus":0.01744940314991702,"score_gpt":0.33543260717366863,"score_spread":0.31798320402375163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416138934","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.054211557,0.00048563752,0.943757,0.000117529686,0.0002885193,0.0005255755,0.000016458656,0.000014226211,0.00058352057],"genre_scores_gemma":[0.24024943,0.000061321174,0.757989,0.00075982907,0.00013288175,0.0003677105,0.0002625786,0.00005083484,0.00012644082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805343,0.00052890624,0.00034284726,0.00059341785,0.000062369225,0.00041900759],"domain_scores_gemma":[0.99906015,0.00016606993,0.0001333552,0.0004718592,0.000086356114,0.000082175866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010952071,0.00024822375,0.0003350683,0.00012372134,0.00007321612,0.00003575042,0.0002344101,0.00026323265,0.000018956098],"category_scores_gemma":[0.0003419997,0.00021686756,0.0002088766,0.00012019597,0.0000695414,0.0000047961603,0.00008033103,0.00014129633,0.0000021632284],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020237545,0.00006934134,0.000122299,0.0000118655735,0.00009755225,0.0000026948376,0.000015953916,0.00030390787,0.98188573,0.007039598,0.000022976774,0.010225722],"study_design_scores_gemma":[0.0017314752,0.000884039,0.000013560354,0.000012821576,0.00003581624,0.000007495457,0.000036843456,0.0047952863,0.871979,0.0028976335,0.117324635,0.00028138785],"about_ca_topic_score_codex":0.000020497717,"about_ca_topic_score_gemma":0.000020121031,"teacher_disagreement_score":0.18603787,"about_ca_system_score_codex":0.00001710163,"about_ca_system_score_gemma":0.000025594254,"threshold_uncertainty_score":0.88436025},"labels":[],"label_agreement":null},{"id":"W2416209635","doi":"10.1007/7651_2014_126","title":"Osteogenic Differentiation from Embryonic Stem Cells","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick; Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Embryonic stem cell; Cell biology; Stem cell; Biology; Genetics; Gene","score_opus":0.01788671403995211,"score_gpt":0.3460153550940584,"score_spread":0.3281286410541063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416209635","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3838481,0.00081037125,0.6142514,0.0000880204,0.000280429,0.00019293075,0.000013234915,0.00001358261,0.0005019399],"genre_scores_gemma":[0.5862386,0.0002816402,0.41097632,0.0005934675,0.00025501038,0.00011318643,0.00037874244,0.00008762862,0.0010754035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956234,0.0026519625,0.0003348256,0.0007592529,0.00012327965,0.0005072421],"domain_scores_gemma":[0.9988472,0.00013092074,0.000112246365,0.0007438661,0.000060201797,0.000105602965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011455578,0.000243638,0.00032163132,0.0001442571,0.000047965317,0.000021815858,0.0004915924,0.0004271743,0.000050156345],"category_scores_gemma":[0.00013995601,0.00023552848,0.00015724548,0.00017715797,0.00011252597,0.000002554626,0.00035648624,0.00023398337,0.000048748385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044894357,0.000043203014,0.0019460759,0.000010317219,0.00004980649,0.0000034645414,0.000013038409,0.000078174824,0.97342443,0.00025578984,0.00005175834,0.024079014],"study_design_scores_gemma":[0.000717241,0.00023735543,0.0008445724,0.000008674247,0.000016131804,0.000003331304,0.000013835133,0.001097488,0.9822885,0.001517212,0.012999333,0.00025636732],"about_ca_topic_score_codex":0.00005015583,"about_ca_topic_score_gemma":0.000033915945,"teacher_disagreement_score":0.20327508,"about_ca_system_score_codex":0.000035723693,"about_ca_system_score_gemma":0.00004740372,"threshold_uncertainty_score":0.96045727},"labels":[],"label_agreement":null},{"id":"W2416244604","doi":"10.1007/978-1-60327-360-2_36","title":"Serum-Stable, Long-Circulating, pH-Sensitive PEGylated Liposomes","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanoparticle-Based Drug Delivery","field":"Materials Science","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Liposome; Pharmacology; Chemistry; Medicine; Biochemistry","score_opus":0.01829297165183635,"score_gpt":0.35179375918959727,"score_spread":0.3335007875377609,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416244604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6667241,0.00048074752,0.33127853,0.0003066965,0.00031087908,0.00023503933,0.000011485465,0.00011674398,0.00053578115],"genre_scores_gemma":[0.58468103,0.000009221301,0.4139967,0.001172307,0.00004122787,0.000011139363,0.000009966169,0.000019703424,0.000058710677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9953872,0.0025143214,0.00052699464,0.00069601834,0.00014707951,0.00072837714],"domain_scores_gemma":[0.9986668,0.00036703207,0.00017311644,0.0005478008,0.0001283546,0.000116845724],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021176268,0.00027817814,0.00048877153,0.00023326302,0.00008371167,0.000043894852,0.00033306904,0.00026425967,0.00020917723],"category_scores_gemma":[0.00083016045,0.00026470108,0.00010554518,0.0005824217,0.00019885578,0.000097798984,0.000114855524,0.00025497473,0.00012329675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004711194,0.00009360613,0.0011819518,0.0000068456543,0.000010388842,0.00029255557,0.00013868672,0.00080590975,0.9822588,0.0016125547,0.000014791899,0.01353678],"study_design_scores_gemma":[0.00059021177,0.00022033959,0.0037894791,0.000027307522,0.000021651957,0.00005555953,0.00003712119,0.0015053164,0.98652214,0.0067885355,0.0001280346,0.00031428246],"about_ca_topic_score_codex":0.0000876227,"about_ca_topic_score_gemma":0.000012601277,"teacher_disagreement_score":0.082718164,"about_ca_system_score_codex":0.000108249325,"about_ca_system_score_gemma":0.00008210758,"threshold_uncertainty_score":0.9999805},"labels":[],"label_agreement":null},{"id":"W2416253734","doi":"10.1007/978-1-59745-526-8_15","title":"Using Bioluminescence Resonance Energy Transfer to Measure Ion Channel Assembly","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Homomeric; Bioluminescence; Energy transfer; Channel (broadcasting); Measure (data warehouse); Ion channel; Resonance (particle physics); Nanotechnology; Förster resonance energy transfer; Chemistry; Biophysics; Physics; Biological system; Computer science; Materials science; Biology; Chemical physics; Receptor; Biochemistry; Atomic physics; Telecommunications; Optics","score_opus":0.06208881699618387,"score_gpt":0.3582410295038763,"score_spread":0.29615221250769247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416253734","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13703713,0.0009716844,0.8607961,0.00014076286,0.00062158,0.00014608292,0.0000054094858,0.000017071747,0.00026415716],"genre_scores_gemma":[0.70355606,0.00021415175,0.29348966,0.0017417305,0.00044942432,0.00006937769,0.000087369604,0.00005353675,0.0003386647],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979082,0.00071647036,0.0003073256,0.0005982263,0.00010024978,0.0003695535],"domain_scores_gemma":[0.9993713,0.000019526507,0.00002904966,0.00034667415,0.00013057071,0.00010289288],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058891607,0.00022082114,0.0002459036,0.00018941506,0.00009662023,0.0000065116105,0.00019777167,0.0003781378,0.000009391238],"category_scores_gemma":[0.000240759,0.00022122911,0.0001135595,0.00040778003,0.00010577579,0.0000041769963,0.00007275889,0.00010564563,0.0000031096492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012398502,0.000040525552,0.00038952666,0.0000039234037,0.000012056608,0.000010795432,0.000048158654,0.00071138894,0.99298024,0.0005569254,0.00007856796,0.005043876],"study_design_scores_gemma":[0.00047977685,0.00023693043,0.00043649558,0.000016899477,0.0000061978158,0.000079427475,0.000020608031,0.0021417195,0.9711073,0.00017174399,0.025009865,0.00029300648],"about_ca_topic_score_codex":0.00007213174,"about_ca_topic_score_gemma":0.000023482151,"teacher_disagreement_score":0.56730646,"about_ca_system_score_codex":0.000035199566,"about_ca_system_score_gemma":0.000072661765,"threshold_uncertainty_score":0.90214616},"labels":[],"label_agreement":null},{"id":"W2416312971","doi":"10.1007/978-1-59745-519-0_2","title":"Membrane Lipid Polymorphism","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Elasticity of cell membranes; Membrane curvature; Membrane; Liposome; Lipid bilayer; Bilayer; Lipid bilayer phase behavior; Chemistry; Polymorphism (computer science); Biophysics; Micelle; Lipid bilayer mechanics; Monolayer; Membrane fluidity; Biological membrane; Crystallography; Membrane biophysics; Hexagonal crystal system; Biochemistry; Biology; Organic chemistry","score_opus":0.04938254499256617,"score_gpt":0.4444207270365379,"score_spread":0.39503818204397173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416312971","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000025201485,0.90623516,0.08974626,0.000013814047,0.0014606973,0.00073607714,0.000049734394,0.000029886753,0.0017031434],"genre_scores_gemma":[0.0000015121847,0.79149246,0.20586158,0.00030040523,0.00075343595,0.00011814083,0.0007311791,0.00013133125,0.0006099254],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947041,0.0018661207,0.0010780926,0.0013318037,0.00013265233,0.00088719977],"domain_scores_gemma":[0.9979851,0.00012217485,0.00038070555,0.0012706827,0.000061445404,0.000179863],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001684252,0.0008675995,0.0020489783,0.0005394054,0.00005409467,0.000021511038,0.00090889016,0.0022347355,0.00010234958],"category_scores_gemma":[0.0003542732,0.00072597724,0.000928551,0.00053650077,0.00027731413,0.000002191941,0.0004517165,0.0007990983,0.00003035653],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013856269,0.0000407188,0.0000048874267,0.0009173127,0.000110019086,0.000052042476,0.0000049295145,3.28061e-7,0.2704513,0.00025957703,0.000038340168,0.7281067],"study_design_scores_gemma":[0.00031230933,0.00016491598,9.0813944e-7,0.0004268048,0.00032220344,0.00024108969,0.0000033269537,2.5722434e-7,0.11401405,0.00004389691,0.88377696,0.00069327385],"about_ca_topic_score_codex":0.000027754713,"about_ca_topic_score_gemma":0.000013725559,"teacher_disagreement_score":0.88373864,"about_ca_system_score_codex":0.000057286354,"about_ca_system_score_gemma":0.0003136547,"threshold_uncertainty_score":0.9995191},"labels":[],"label_agreement":null},{"id":"W2416329088","doi":"10.1007/978-1-62703-251-3_8","title":"BRET Approaches to Characterize Dopamine and TAAR1 Receptor Pharmacology and Signaling","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Dopamine; Dopamine receptor D2; Dopamine receptor; Receptor; Signal transduction; Dopamine receptor D3; Chemistry; Neuroscience; Pharmacology; Biology; Cell biology; Biochemistry","score_opus":0.06451727452727078,"score_gpt":0.3510678471900825,"score_spread":0.2865505726628117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416329088","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5817938,0.0024053273,0.41494754,0.00021848228,0.0003114876,0.00022769356,0.000010239788,0.000009241897,0.00007621095],"genre_scores_gemma":[0.40032083,0.00019168276,0.5979493,0.0009777094,0.00030401285,0.0000897691,0.0000707934,0.00003513711,0.00006077436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776417,0.00085583545,0.00029409287,0.0005154838,0.00004898495,0.0005214303],"domain_scores_gemma":[0.9994286,0.0000650115,0.00008072391,0.00018972252,0.00002285431,0.0002131207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015697515,0.00024554806,0.00033581269,0.0001286867,0.000058216177,0.00001693674,0.00014549833,0.00031048182,0.00008507156],"category_scores_gemma":[0.00015069619,0.00023251565,0.000051546416,0.00012711069,0.00011098395,0.000006167982,0.00028488203,0.0001677763,0.0000029630985],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007291858,0.000040988863,0.0017659062,0.000017925318,0.000043701973,0.0000017038739,0.00012756808,0.0000065966838,0.97824115,0.0012879287,0.000023652496,0.018369952],"study_design_scores_gemma":[0.0004598079,0.0002977907,0.00032573316,0.000008595668,0.000021020482,0.000034578447,0.00007323229,0.00005588909,0.97805524,0.0003629965,0.020015175,0.00028993815],"about_ca_topic_score_codex":0.000011855097,"about_ca_topic_score_gemma":0.0000011926574,"teacher_disagreement_score":0.18300174,"about_ca_system_score_codex":0.000013175556,"about_ca_system_score_gemma":0.00001789446,"threshold_uncertainty_score":0.9481713},"labels":[],"label_agreement":null},{"id":"W2416331553","doi":"10.1007/978-1-61779-276-2_9","title":"Pooled Lentiviral shRNA Screening for Functional Genomics in Mammalian Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Small hairpin RNA; RNA interference; Computational biology; Biology; Genome; Gene; Genomics; Functional genomics; RNA; Caenorhabditis elegans; Genetics","score_opus":0.03598016671439417,"score_gpt":0.3817376164376946,"score_spread":0.3457574497233004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416331553","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13519076,0.00073452696,0.86312366,0.000020645646,0.00030590454,0.00024594218,0.000012201977,0.000007830025,0.00035855314],"genre_scores_gemma":[0.16783583,0.00003187161,0.8315695,0.00018935117,0.00008388077,0.00008210121,0.00007630965,0.000032903616,0.000098233286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859643,0.00023424691,0.00030348773,0.00044461363,0.000035935896,0.00038530928],"domain_scores_gemma":[0.99956995,0.000028397451,0.000052900472,0.00026716184,0.000031419007,0.000050195715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007663164,0.00018366057,0.00021629994,0.00014981176,0.000025261015,0.0000063372345,0.00019108664,0.0002672469,0.000022454538],"category_scores_gemma":[0.00010173695,0.00020033545,0.00012462694,0.00011216359,0.00006216086,0.000002010458,0.00012088503,0.00013160506,0.0000017407259],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011577353,0.000038585786,0.0026862763,0.000011618992,0.00003188488,0.0000056975155,0.000050990537,0.0007618089,0.9818151,0.00042350675,0.000022609735,0.014036134],"study_design_scores_gemma":[0.0008902926,0.0002063318,0.003525401,0.0000065552003,0.000015645703,0.000007594409,0.000051519564,0.0007986212,0.9875903,0.0012904217,0.005369673,0.000247644],"about_ca_topic_score_codex":0.00004794215,"about_ca_topic_score_gemma":0.000053307853,"teacher_disagreement_score":0.032645088,"about_ca_system_score_codex":0.000018687615,"about_ca_system_score_gemma":0.000033433793,"threshold_uncertainty_score":0.81694424},"labels":[],"label_agreement":null},{"id":"W2416347695","doi":"10.1007/978-1-61779-204-5_11","title":"Regulation of 7B2 mRNA Translation: Dissecting the Role of Its 5′-Untranslated Region","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"","keywords":"Messenger RNA; Untranslated region; Translation (biology); Three prime untranslated region; Biology; Cell biology; Protein biosynthesis; Five prime untranslated region; Molecular biology; Translational regulation; Gene; Biochemistry","score_opus":0.043979971238955265,"score_gpt":0.37414371280942693,"score_spread":0.3301637415704717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416347695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5911411,0.0038663724,0.4029859,0.000048126763,0.00005797206,0.00024922861,0.0000026503267,0.000005041888,0.0016435722],"genre_scores_gemma":[0.88259107,0.00013835938,0.117141,0.00002024428,0.00002404094,0.000014117676,0.00001921507,0.00001374016,0.000038224585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823606,0.0008803857,0.00035651663,0.00024200966,0.00007030262,0.00021470958],"domain_scores_gemma":[0.99931633,0.00006151989,0.00014093297,0.00031854282,0.00013078483,0.000031905918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000987884,0.000109638655,0.0001926938,0.00008852799,0.00003319332,0.0000023084401,0.00023348033,0.00020387724,0.000015187597],"category_scores_gemma":[0.0003089969,0.00008489002,0.00010231559,0.00023195594,0.00013869083,0.0000032492007,0.00004026938,0.00012474519,3.5107576e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014604203,0.000029393646,0.0039487835,0.000017400069,0.000036260048,0.000001182977,0.00022089154,0.000037455437,0.9487127,0.0012680102,0.0000011830432,0.045580704],"study_design_scores_gemma":[0.0002926389,0.00022969283,0.0030988883,0.00001877891,0.000011650372,0.0000083236755,0.00010121814,0.0009577367,0.99154663,0.0031901523,0.0004595381,0.00008475474],"about_ca_topic_score_codex":0.00007495906,"about_ca_topic_score_gemma":0.000023648283,"teacher_disagreement_score":0.29144993,"about_ca_system_score_codex":0.0000052705223,"about_ca_system_score_gemma":0.00003601962,"threshold_uncertainty_score":0.34617147},"labels":[],"label_agreement":null},{"id":"W2416454361","doi":"10.1007/978-1-62703-589-7_19","title":"Genome-Based Bioinformatic Prediction of Major Histocompatibility Complex (MHC) Epitopes","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Major histocompatibility complex; Computational biology; Genome; Epitope; Biology; Gene; Genetics; Antigen","score_opus":0.02975888044422771,"score_gpt":0.3233868006341823,"score_spread":0.2936279201899546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416454361","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3408011,0.00038491422,0.65712583,0.000089601235,0.00008324317,0.00064273365,0.000028554266,0.0000123934215,0.00083165173],"genre_scores_gemma":[0.37045577,0.000017825627,0.6286655,0.00023561253,0.000023020842,0.0001415542,0.0004197864,0.000017270642,0.00002362419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99811655,0.00043444216,0.0007873377,0.00027370022,0.00007492257,0.00031304194],"domain_scores_gemma":[0.9988711,0.000043188313,0.0002641505,0.0006394569,0.00012249024,0.000059631468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008587472,0.00021982932,0.00038172092,0.00015948735,0.00004191334,0.000014176451,0.0003492396,0.00024413146,0.00010485929],"category_scores_gemma":[0.00023663949,0.00019293754,0.00015132365,0.00018922423,0.00016368281,0.000008939368,0.0001590683,0.00012999267,0.000009657871],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027263843,0.00011385037,0.004234152,0.00010261204,0.000041657993,2.117695e-7,0.000048408463,0.0002670224,0.98873264,0.00018649476,0.0000534347,0.006192241],"study_design_scores_gemma":[0.0023580706,0.001369085,0.08281537,0.000028723274,0.00004436467,0.000014047705,0.00021911538,0.026540201,0.87463,0.002569023,0.008912089,0.000499909],"about_ca_topic_score_codex":0.00011248038,"about_ca_topic_score_gemma":0.000005660274,"teacher_disagreement_score":0.114102654,"about_ca_system_score_codex":0.000032046348,"about_ca_system_score_gemma":0.00006607034,"threshold_uncertainty_score":0.7867765},"labels":[],"label_agreement":null},{"id":"W2416488913","doi":"10.1007/978-1-62703-526-2_13","title":"Electron Spectroscopic Tomography of Specific Chromatin Domains","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Chromatin; Nucleosome; Histone octamer; Epigenome; Histone code; Cell biology; Histone; Histone-modifying enzymes; Histone H1; Biology; Histone methylation; ChIA-PET; Epigenomics; Chromatin remodeling; Biophysics; Chemistry; DNA; Genetics; DNA methylation; Gene expression","score_opus":0.006596502081367221,"score_gpt":0.3088331061348065,"score_spread":0.30223660405343933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416488913","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68321675,0.0012620164,0.3136746,0.000057486428,0.00010708575,0.0002594545,0.000004672181,0.000007754512,0.0014101965],"genre_scores_gemma":[0.46816093,0.00021548166,0.53129095,0.00009671465,0.000043724198,0.00005256965,0.00006352142,0.000025921778,0.0000502216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981575,0.0004677648,0.0004404503,0.00044765515,0.00006303604,0.00042361562],"domain_scores_gemma":[0.99912524,0.000031162836,0.00016120772,0.0005602872,0.00006052767,0.00006156043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038245897,0.00021994363,0.00033426494,0.0001670237,0.00002788298,0.0000125911465,0.0003547947,0.00027286384,0.00008268851],"category_scores_gemma":[0.0000677602,0.00021409821,0.00016042987,0.0002518554,0.00017077946,0.0000022974277,0.00014783144,0.00015102055,0.000010460149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011213648,0.00006368467,0.004099856,0.000016246684,0.00003876253,0.0000020625384,0.0000306387,0.00002444608,0.98967284,0.0033387723,0.000056770932,0.002644698],"study_design_scores_gemma":[0.0005289583,0.0005134164,0.0064253174,0.0000079225465,0.000008114352,0.000013591753,0.00003256173,0.00016745513,0.9767705,0.013031814,0.0022651968,0.00023515975],"about_ca_topic_score_codex":0.00004351648,"about_ca_topic_score_gemma":0.000013773465,"teacher_disagreement_score":0.21761633,"about_ca_system_score_codex":0.000022962264,"about_ca_system_score_gemma":0.00004129081,"threshold_uncertainty_score":0.87306714},"labels":[],"label_agreement":null},{"id":"W2416494576","doi":"10.1007/978-1-59745-000-3_21","title":"Use of Intact Xenopus Oocytes in Nucleocytoplasmic Transport Studies","year":2006,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Nuclear Structure and Function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Xenopus; Oocyte; Cytoplasm; Nuclear pore; Biophysics; Substrate (aquarium); Electron microscope; Nuclear transport; Nucleus; Cell biology; Cell nucleus; Chemistry; Nanotechnology; Biology; Materials science; Biochemistry; Physics; Embryo; Optics","score_opus":0.07475128352509512,"score_gpt":0.43518305856951084,"score_spread":0.3604317750444157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416494576","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023480668,0.98349255,0.013037755,0.000005858795,0.00045560082,0.00048323983,0.000048157584,0.00001025329,0.000118522075],"genre_scores_gemma":[0.00007021974,0.84694,0.15230763,0.000053230404,0.000073733405,0.000051567586,0.0003574245,0.00006732603,0.00007887617],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99652493,0.0013365397,0.0009650637,0.00073387794,0.00007046598,0.00036909772],"domain_scores_gemma":[0.9988281,0.00013780367,0.0003606673,0.00057981804,0.00005819928,0.000035425448],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006530283,0.0004830159,0.0017757925,0.00041692055,0.000019572553,0.0000057660145,0.00029146078,0.0009839673,0.000008313891],"category_scores_gemma":[0.00030290236,0.00041226397,0.000448398,0.0003853968,0.0002266192,0.0000036834974,0.00013187069,0.000412918,0.0000020598745],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008151376,0.00009035595,0.00054276217,0.0028854606,0.00040234873,0.000070051174,0.000033454235,0.000042851203,0.08062813,0.00040573737,0.00009626653,0.9147211],"study_design_scores_gemma":[0.0003081623,0.0002830873,0.00007219395,0.0008342944,0.00024411916,0.00005152403,0.000015013514,0.0000030137699,0.012689367,0.0005436817,0.9844823,0.00047322598],"about_ca_topic_score_codex":0.0001027207,"about_ca_topic_score_gemma":0.00013513335,"teacher_disagreement_score":0.984386,"about_ca_system_score_codex":0.00006433697,"about_ca_system_score_gemma":0.000117678814,"threshold_uncertainty_score":0.9998329},"labels":[],"label_agreement":null},{"id":"W2416499038","doi":"10.1007/978-1-62703-465-4_15","title":"In Vitro O-Antigen Ligase Assay","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"DNA ligase; Chemistry; In vitro; Biochemistry; Glycosidic bond; Antigen; Glycosyltransferase; Oligosaccharide; Enzyme; Biology; Immunology","score_opus":0.01916086667452817,"score_gpt":0.40154599864830975,"score_spread":0.3823851319737816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416499038","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48651072,0.0011213529,0.50646484,0.0011053998,0.00019525955,0.0007376187,0.000006940691,0.000013786791,0.0038440854],"genre_scores_gemma":[0.3742375,0.0001344398,0.6224897,0.0016145898,0.00008717303,0.00033660128,0.000108998924,0.000039385755,0.000951591],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970002,0.0015573597,0.00034102195,0.0005138594,0.00008812015,0.0004994433],"domain_scores_gemma":[0.9992367,0.000056708886,0.000056078294,0.00047419185,0.00007746126,0.000098840625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014690472,0.00018208491,0.00024693238,0.00025731616,0.000027884953,0.000021514552,0.00032135108,0.00035325837,0.00024600443],"category_scores_gemma":[0.0008824936,0.0001724232,0.00009223408,0.00031773077,0.00012160614,0.0000051620286,0.00022051949,0.00025914804,0.00008784834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047609337,0.00006112879,0.0021208883,0.0000064517876,0.0000131994675,0.000021075035,0.000016530079,0.00002142161,0.975981,0.00028677762,0.00019482325,0.021229101],"study_design_scores_gemma":[0.0006055613,0.00011076556,0.0012187881,0.000004379038,0.0000013949247,0.000012208538,0.000021428183,0.00040881982,0.9664446,0.0031650327,0.027812429,0.0001945628],"about_ca_topic_score_codex":0.0003451313,"about_ca_topic_score_gemma":0.000034401528,"teacher_disagreement_score":0.11602486,"about_ca_system_score_codex":0.000027032409,"about_ca_system_score_gemma":0.00006929572,"threshold_uncertainty_score":0.70312136},"labels":[],"label_agreement":null},{"id":"W2416507720","doi":"10.1007/978-1-60327-164-6_16","title":"Measurement of the Bacteriophage Inactivation Kinetics with Purified Receptors","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Bacteriophage; Kinetics; Receptor; Chemistry; Biology; Biochemistry; Physics; Gene; Escherichia coli; Classical mechanics","score_opus":0.01587145980244197,"score_gpt":0.31384572405072847,"score_spread":0.2979742642482865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416507720","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61835223,0.000032126183,0.37763527,0.0005939732,0.0002225115,0.00024400925,0.0000013380801,0.000009333258,0.0029092096],"genre_scores_gemma":[0.74519664,0.000004981572,0.2544546,0.0002751364,0.000006307049,0.000006205544,0.0000013054394,0.000005225159,0.00004961191],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990354,0.00041225905,0.00017842803,0.00017029903,0.00006816932,0.00013540208],"domain_scores_gemma":[0.9996242,0.000016027489,0.000103189464,0.00022384706,0.000013582405,0.000019185858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036896992,0.00008734672,0.00012230025,0.000028486898,0.000025333678,0.0000051576544,0.00016632913,0.0000686283,0.000207954],"category_scores_gemma":[0.00008166165,0.00005714471,0.000040205443,0.00023298792,0.00010942501,0.000030519113,0.000053144813,0.00012100437,0.0000035614248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019596859,0.000063297106,0.00066882465,0.0000012778477,0.0000046739206,6.737286e-7,0.00005206858,0.00005077968,0.96920425,0.000083359824,0.000011147812,0.02984005],"study_design_scores_gemma":[0.00014839182,0.00017794082,0.10715633,0.00001460797,0.000007218221,0.000005006075,0.000013013796,0.000008467234,0.88802195,0.00032136202,0.0040599434,0.00006575573],"about_ca_topic_score_codex":0.00008924273,"about_ca_topic_score_gemma":0.000049312825,"teacher_disagreement_score":0.12684439,"about_ca_system_score_codex":0.00012052746,"about_ca_system_score_gemma":0.0000067131,"threshold_uncertainty_score":0.23302935},"labels":[],"label_agreement":null},{"id":"W2416558339","doi":"10.1007/978-1-4939-0473-0_30","title":"Liquid Chromatography/Mass Spectrometry for the Identification and Quantification of Rhamnolipids","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chemistry; Chromatography; Mass spectrometry; High-performance liquid chromatography; Tandem mass spectrometry; Dissociation (chemistry); Organic chemistry","score_opus":0.016385124980931157,"score_gpt":0.3350356436833628,"score_spread":0.31865051870243166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416558339","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15373312,0.00008837351,0.8454028,0.00030060165,0.0001294487,0.00021271755,0.000005011019,0.0000071455106,0.00012078738],"genre_scores_gemma":[0.63326913,0.00005217368,0.36651596,0.0001112687,0.000011461307,0.000013203048,0.0000089622845,0.0000050656336,0.0000127835465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897647,0.00037385864,0.00026359857,0.00021749889,0.000046828674,0.00012173716],"domain_scores_gemma":[0.9993779,0.00023803624,0.00013919426,0.0002155518,0.000009695402,0.000019633435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019417963,0.00006925694,0.0001171068,0.00006170324,0.000036989477,0.000007160228,0.00015802584,0.00008601511,0.000054091954],"category_scores_gemma":[0.0003723686,0.00005006427,0.000041621337,0.00026832262,0.00023997168,0.000019425177,0.00003941641,0.000048974864,0.000004683995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016477314,0.000013765474,0.004765443,0.0000059700624,0.000005394754,2.3269966e-8,0.000031335596,0.0000132429905,0.98576003,0.0021210935,0.000018380604,0.007248825],"study_design_scores_gemma":[0.00016874136,0.00009791575,0.022815205,0.0000023000578,0.000009630173,7.206095e-7,0.000017383069,0.0014690958,0.97002417,0.0027686197,0.0025589226,0.00006731842],"about_ca_topic_score_codex":0.000030244646,"about_ca_topic_score_gemma":0.000012404543,"teacher_disagreement_score":0.47953597,"about_ca_system_score_codex":0.000014507901,"about_ca_system_score_gemma":0.0000029361022,"threshold_uncertainty_score":0.20415618},"labels":[],"label_agreement":null},{"id":"W2416577414","doi":"10.1007/978-1-61779-591-6_10","title":"Methods for DNA Barcoding Photosynthetic Protists Emphasizing the Macroalgae and Diatoms","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":240,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick","funders":"Ontario Genomics Institute; Genome Canada","keywords":"DNA barcoding; Biology; Barcode; Cytochrome c oxidase subunit I; Plastid; Mitochondrial DNA; Molecular marker; Red algae; Botany; Algae; Gene; Evolutionary biology; Genetics; Chloroplast","score_opus":0.027367951610607916,"score_gpt":0.40471241387748463,"score_spread":0.37734446226687673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416577414","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2392667,0.0006212113,0.75817084,0.00026290017,0.00024991142,0.00065123616,0.00000339876,0.000016834327,0.0007569866],"genre_scores_gemma":[0.19276513,0.00002602512,0.8060506,0.0008906818,0.000022675791,0.00019555114,0.0000068145073,0.000015637748,0.000026882282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9939793,0.0050019636,0.00022523914,0.0002573682,0.000021349282,0.0005147828],"domain_scores_gemma":[0.9978614,0.0016526962,0.00008228415,0.00033580032,0.0000048237257,0.000062995605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004903822,0.00015901141,0.00026774424,0.000042135463,0.00022971946,0.00000845505,0.0003520956,0.00020349327,0.00034291987],"category_scores_gemma":[0.00067027705,0.000118502285,0.00006694592,0.00014957513,0.0005646571,0.00004329617,0.00048908626,0.00028255294,0.000010684112],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021611222,0.000037860762,0.008773248,0.00000842077,0.000013808784,4.6366975e-7,0.0005212464,0.000006392448,0.9164147,0.0021599743,0.000021281796,0.07202102],"study_design_scores_gemma":[0.0006885775,0.0002301498,0.018539527,0.000012566713,0.000051325795,0.00008081415,0.0001645846,0.000937099,0.8502255,0.06582415,0.062792465,0.0004532259],"about_ca_topic_score_codex":0.00007771589,"about_ca_topic_score_gemma":0.000044979806,"teacher_disagreement_score":0.0715678,"about_ca_system_score_codex":0.000046966055,"about_ca_system_score_gemma":0.0000066531898,"threshold_uncertainty_score":0.48323828},"labels":[],"label_agreement":null},{"id":"W2416614701","doi":"10.1007/978-1-4939-1047-2_3","title":"Preparation and Characterization of Circulating Angiogenic Cells for Tissue Engineering Applications","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Peripheral blood mononuclear cell; Bone marrow; Flow cytometry; Population; Cell; Angiogenesis; Immunology; Fibronectin; Cord blood; Tissue engineering; Pathology; Biology; Cell biology; Medicine; Cancer research; In vitro; Biomedical engineering","score_opus":0.011729939568129013,"score_gpt":0.35666022133780956,"score_spread":0.34493028176968055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416614701","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21081784,0.00033046014,0.7884901,0.000012156543,0.00004417218,0.00026554568,0.000009852629,0.0000042203355,0.000025619878],"genre_scores_gemma":[0.48170844,0.000056001998,0.5176756,0.000062004445,0.00008527382,0.00022427646,0.00015302605,0.000017227369,0.00001814368],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929255,0.00012032613,0.00020222121,0.00024357633,0.000020949821,0.00012034709],"domain_scores_gemma":[0.9996379,0.00003538174,0.00008918313,0.00017039877,0.00004485992,0.000022279908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043024702,0.0000866099,0.0001403308,0.000055478617,0.000020361027,0.0000041721887,0.00006733855,0.00013803947,0.0000018886413],"category_scores_gemma":[0.00006468111,0.00009177601,0.000048651495,0.00007666575,0.000030982173,0.0000018113943,0.00003741594,0.000022006587,1.8699751e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010244574,0.000009760378,0.00044696216,0.00003102478,0.000015359585,3.5244316e-8,0.000014500843,0.00020398632,0.9784089,0.0012824294,0.0000011029872,0.01957573],"study_design_scores_gemma":[0.00017663723,0.00013090255,0.00053198653,0.000005581917,0.000013276239,0.0000020598254,0.00000260104,0.0028961773,0.9810102,0.000248568,0.014885136,0.00009688428],"about_ca_topic_score_codex":0.0000033621716,"about_ca_topic_score_gemma":0.0000012909269,"teacher_disagreement_score":0.2708906,"about_ca_system_score_codex":0.000006097791,"about_ca_system_score_gemma":0.000012256285,"threshold_uncertainty_score":0.37425172},"labels":[],"label_agreement":null},{"id":"W2416616485","doi":"10.1007/978-1-60327-101-1_11","title":"Neural Networks Predict Protein Structure and Function","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium","funders":"National Institute of General Medical Sciences","keywords":"Artificial neural network; Computer science; ENCODE; Feedforward neural network; Artificial intelligence; Machine learning; Set (abstract data type); Protein function prediction; Types of artificial neural networks; Supervised learning; Protein structure prediction; Time delay neural network; Protein structure; Protein function; Biology","score_opus":0.008454072518830746,"score_gpt":0.2986411057929527,"score_spread":0.290187033274122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416616485","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4234475,0.0013481453,0.57469875,0.00003243895,0.0001320533,0.00022417498,0.0000064478336,0.000011658782,0.000098817996],"genre_scores_gemma":[0.7271832,0.000066046014,0.27194998,0.00042307627,0.00013976036,0.000036531463,0.000111067915,0.00002391455,0.00006636174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983666,0.00055754377,0.00022732516,0.00048461067,0.000050694507,0.00031320663],"domain_scores_gemma":[0.9994734,0.000014987284,0.00007485251,0.000330406,0.00003738624,0.00006894644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002548313,0.00020891918,0.00021998613,0.000072872695,0.00007339577,0.0000075634557,0.00015075723,0.00045545594,0.00000952087],"category_scores_gemma":[0.00015274089,0.00018751377,0.00005958628,0.00013598791,0.00023135675,0.0000030776,0.0001628298,0.0002556092,2.0650381e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011781719,0.000009923185,0.007369465,0.000007799676,0.000029906092,0.000017428381,0.00001130066,0.0007954618,0.97360206,0.000682147,0.000021397987,0.017335309],"study_design_scores_gemma":[0.003158819,0.0025255762,0.021905506,0.000025203191,0.0000686973,0.00095545227,0.00003092141,0.038369805,0.8896872,0.027675305,0.014277426,0.0013201308],"about_ca_topic_score_codex":0.000017675051,"about_ca_topic_score_gemma":0.000014327118,"teacher_disagreement_score":0.30373576,"about_ca_system_score_codex":0.000009910195,"about_ca_system_score_gemma":0.00002889412,"threshold_uncertainty_score":0.7646589},"labels":[],"label_agreement":null},{"id":"W2416626104","doi":"10.1007/978-1-59745-194-9_12","title":"Electroporation of Adherent Cells In Situ for the Study of Signal Transduction and Gap Junctional Communication","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Inactivation Methods","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Electroporation; Lucifer yellow; Cell biology; Biophysics; Materials science; Transfection; Chemistry; Intracellular; Nanotechnology; Biology; Cell culture; Gap junction; Biochemistry","score_opus":0.047686848472890106,"score_gpt":0.3910562130034768,"score_spread":0.3433693645305867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416626104","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49326685,0.0003146137,0.50594556,0.000033854718,0.000027961943,0.00038767728,0.0000023228424,0.0000011129409,0.000020059171],"genre_scores_gemma":[0.7346113,0.0001615023,0.2650766,0.000026386666,0.000013293583,0.000052885196,0.000038566577,0.000007636404,0.00001184594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978266,0.0014538995,0.00036353167,0.00021023587,0.000043478874,0.00010230545],"domain_scores_gemma":[0.9993256,0.00015512401,0.0001690378,0.00023668107,0.000101876496,0.000011716271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013029116,0.000091816975,0.00018648358,0.00009834996,0.000038992715,0.0000016804723,0.00012266089,0.00013125193,0.000007496938],"category_scores_gemma":[0.00013412068,0.00007835897,0.000044235254,0.00016391382,0.0001511672,0.0000032069274,0.000036166857,0.00010076283,4.2519776e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021639514,0.00021568617,0.0011195743,0.0000111599675,0.000030311412,1.5890383e-7,0.0002517672,0.00047609373,0.992968,0.00030980192,0.00001367796,0.004387345],"study_design_scores_gemma":[0.00087710103,0.0007800593,0.0020542308,0.0000034680365,0.000014905133,0.0000054861853,0.00026913107,0.00018111446,0.9944551,0.00085834553,0.00043127555,0.00006977945],"about_ca_topic_score_codex":0.00008420186,"about_ca_topic_score_gemma":0.00012264862,"teacher_disagreement_score":0.2413444,"about_ca_system_score_codex":0.000015489753,"about_ca_system_score_gemma":0.000040890543,"threshold_uncertainty_score":0.3195386},"labels":[],"label_agreement":null},{"id":"W2416707841","doi":"10.1007/978-1-62703-730-3_3","title":"Design and Evaluation of Clinically Relevant SOFA-HDV Ribozymes Targeting HIV RNA","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke; McGill University","funders":"","keywords":"Ribozyme; RNA; Computational biology; Biology; Nucleic acid; Ligase ribozyme; Virology; Human immunodeficiency virus (HIV); Genetics; Gene","score_opus":0.05947564101951734,"score_gpt":0.4382079428823758,"score_spread":0.37873230186285844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416707841","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24750867,0.008383531,0.7421793,0.0003826194,0.0001459117,0.00088976196,0.0000083267805,0.000018811397,0.00048307472],"genre_scores_gemma":[0.26648375,0.0002286425,0.7328305,0.00007179124,0.000007051928,0.00018710314,0.00008608129,0.000012650153,0.00009243047],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9907217,0.007978527,0.0005405166,0.00035231933,0.000043488046,0.0003634458],"domain_scores_gemma":[0.99818283,0.0012079341,0.00015317195,0.00023936598,0.00018651046,0.000030191955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0066210763,0.00014230234,0.00035997172,0.00014413316,0.000049872182,0.0000059414856,0.00015099137,0.0002934308,0.0005933439],"category_scores_gemma":[0.0025250101,0.00011083375,0.000059887305,0.000114160044,0.00033832932,0.000027393053,0.00011710283,0.00025643577,0.00013856696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005851268,0.000083538696,0.0039122435,0.000007566907,0.00011744873,0.0000032073062,0.00010995704,0.000038356276,0.8795693,0.0002772524,0.00016267515,0.11565995],"study_design_scores_gemma":[0.0036947825,0.0010055351,0.003733828,0.00003240958,0.000100391815,0.000026841088,0.00015894196,0.0012679889,0.9639321,0.024430202,0.0013771789,0.00023981131],"about_ca_topic_score_codex":0.00008986883,"about_ca_topic_score_gemma":0.0000014786052,"teacher_disagreement_score":0.11542014,"about_ca_system_score_codex":0.00003434697,"about_ca_system_score_gemma":0.00010220143,"threshold_uncertainty_score":0.64967},"labels":[],"label_agreement":null},{"id":"W2416712535","doi":"10.1007/978-1-62703-017-5_16","title":"Simulations of Lipid Monolayers","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Monolayer; Surface pressure; Surface tension; Chemical physics; Materials science; Lipid bilayer; Surface (topology); Chemistry; Representation (politics); Nanotechnology; Membrane; Physics; Thermodynamics; Mechanics; Mathematics; Geometry; Biochemistry","score_opus":0.022885679609791265,"score_gpt":0.39490341345009017,"score_spread":0.3720177338402989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416712535","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7004568,0.00040907328,0.29770768,0.000032440505,0.00041682855,0.00014231258,0.000013654614,0.000006753028,0.0008144903],"genre_scores_gemma":[0.70997125,0.000017396755,0.2896147,0.00013366167,0.00014398355,0.000009948807,0.000048159633,0.000014525725,0.000046356367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986826,0.00046213676,0.00027220717,0.00022330304,0.000044466495,0.0003152433],"domain_scores_gemma":[0.9994145,0.000038278315,0.00008490183,0.00035416032,0.000041483137,0.000066666886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004558685,0.00013909227,0.00021368351,0.00010227066,0.000020089838,0.0000024225315,0.00017138442,0.0002548545,0.000049469658],"category_scores_gemma":[0.00023668935,0.00012683171,0.00010090671,0.00015678303,0.00010015975,0.0000029520686,0.0001012465,0.00010473317,0.0000018524913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020303965,0.00005477354,0.025949135,0.000007826446,0.000021261243,3.95809e-7,0.000041387055,0.000090828755,0.96781874,0.0006696661,0.000011915341,0.005313777],"study_design_scores_gemma":[0.000313362,0.000097793985,0.002419312,0.0000032345245,0.0000186864,0.000007326355,0.000021312953,0.00002170146,0.98505604,0.00017483508,0.011725462,0.00014090103],"about_ca_topic_score_codex":0.000014163276,"about_ca_topic_score_gemma":0.000003971419,"teacher_disagreement_score":0.023529824,"about_ca_system_score_codex":0.000008622013,"about_ca_system_score_gemma":0.000030205965,"threshold_uncertainty_score":0.5172047},"labels":[],"label_agreement":null},{"id":"W2416749521","doi":"10.1007/978-1-61779-046-1_15","title":"Cell-Free microRNA-Mediated Translation Repression in Caenorhabditis elegans","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Caenorhabditis elegans; microRNA; Translation (biology); Psychological repression; Biology; Cell biology; Computational biology; Mechanism (biology); Transgene; Genetics; Gene; Gene expression; Messenger RNA","score_opus":0.024122527559289106,"score_gpt":0.3335891618629428,"score_spread":0.3094666343036537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416749521","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5558451,0.0031854005,0.43822923,0.00006388125,0.0001929557,0.0003973876,0.000031403466,0.00002105497,0.0020335899],"genre_scores_gemma":[0.4229756,0.00016499193,0.5760358,0.0002107369,0.000050289935,0.00007926232,0.00038619904,0.00004806914,0.000049062364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971402,0.0012502624,0.00048161906,0.00065291004,0.00006988815,0.00040506467],"domain_scores_gemma":[0.99892175,0.000047629404,0.00014338235,0.000755529,0.000049789607,0.000081911865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077291724,0.00023356984,0.0002635322,0.00023847827,0.000028433797,0.000006798506,0.00039140065,0.00050623104,0.000068276495],"category_scores_gemma":[0.00037078676,0.0002446697,0.00011186694,0.00029430867,0.00012451249,0.0000056569183,0.00014242994,0.00019489772,0.000006582854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012721306,0.00013418582,0.008678567,0.00001931244,0.000014462934,0.000027561171,0.00013748216,0.00003251861,0.9865149,0.00008428595,0.00009599627,0.0041334736],"study_design_scores_gemma":[0.0013879326,0.00015199502,0.009610735,0.000022272026,0.000014739778,0.000012799484,0.000040467225,0.00017607624,0.98289514,0.002593991,0.002795964,0.00029786504],"about_ca_topic_score_codex":0.00022723846,"about_ca_topic_score_gemma":0.00013277712,"teacher_disagreement_score":0.13780656,"about_ca_system_score_codex":0.000038823324,"about_ca_system_score_gemma":0.00007026287,"threshold_uncertainty_score":0.99773407},"labels":[],"label_agreement":null},{"id":"W2416759835","doi":"10.1007/978-1-59745-385-1_18","title":"Budgeting, Funding and Managing Clinical Research Projects","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Memorial University of Newfoundland","funders":"","keywords":"Multidisciplinary approach; Accountability; Business; Plan (archaeology); Corporate governance; Process management; Multidisciplinary team; Finance; Accounting; Political science; Medicine; Nursing","score_opus":0.7391105230570432,"score_gpt":0.7414319176937864,"score_spread":0.0023213946367431904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416759835","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001004789,0.96201175,0.030729452,0.0010538712,0.0002635205,0.001935171,0.0000028266693,0.000032222466,0.003961132],"genre_scores_gemma":[3.546459e-7,0.7339212,0.26456702,0.0008402771,0.00024487902,0.00013658345,0.000029101519,0.000049791044,0.00021082842],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.97835606,0.01676508,0.0012782201,0.0010066268,0.0004468769,0.002147123],"domain_scores_gemma":[0.98844093,0.007289241,0.00019971599,0.00070088974,0.00016113317,0.0032080852],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.03561867,0.00034479387,0.002655835,0.0013530246,0.00011672496,0.000015636286,0.00028828255,0.0012525483,0.000027805369],"category_scores_gemma":[0.194268,0.00024931267,0.0003110779,0.0011258982,0.0009597423,0.000016275706,0.00050330436,0.0045778216,0.00002677936],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002796577,0.000068181376,0.00012835002,0.010355325,0.00006651181,0.0012789796,0.000036126115,4.347294e-9,0.000028955606,0.0004421922,0.0007845648,0.98678285],"study_design_scores_gemma":[0.0005723364,0.0007742136,0.000014414588,0.008950386,0.00005554403,0.0006865122,0.000022603326,0.000016236247,0.00000900561,0.00050970144,0.98820716,0.00018187867],"about_ca_topic_score_codex":0.00007853928,"about_ca_topic_score_gemma":0.0000026290422,"teacher_disagreement_score":0.9874226,"about_ca_system_score_codex":0.00031214982,"about_ca_system_score_gemma":0.0063574705,"threshold_uncertainty_score":0.9999959},"labels":[],"label_agreement":null},{"id":"W2416792394","doi":"10.1007/978-1-61779-243-4_7","title":"In Vitro and In Vivo Silencing of the Androgen Receptor","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Prostate Cancer Treatment and Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"LNCaP; Androgen receptor; Prostate cancer; In vivo; Gene knockdown; Gene silencing; Cancer research; In vitro; Small hairpin RNA; Androgen; Chemistry; Medicine; Biology; Internal medicine; Cancer; Hormone; Apoptosis; Biochemistry; Gene; Genetics","score_opus":0.05114471733162819,"score_gpt":0.4154833706151136,"score_spread":0.3643386532834854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416792394","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994016,0.0020120267,0.0025094794,0.00022540246,0.000067421555,0.00029422584,0.0000033535814,0.0000024559208,0.00086965977],"genre_scores_gemma":[0.65484,0.00035379795,0.34434587,0.0002507296,0.000011685496,0.000054221513,0.0000021759151,0.000012114847,0.00012941752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988997,0.00057563203,0.00016343196,0.00015703311,0.000036997324,0.0001671866],"domain_scores_gemma":[0.9997117,0.00007209741,0.0000289859,0.00014882417,0.000014303486,0.000024077615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007387994,0.000062917585,0.00021109065,0.0001436746,0.0000069334646,7.316381e-7,0.000065905886,0.00009204492,0.000052623913],"category_scores_gemma":[0.00018288527,0.000039387454,0.000027876142,0.00024351764,0.00013691628,0.000009911091,0.000073601055,0.00015024173,3.6312414e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028616405,0.000046271052,0.05773364,0.000022411357,0.000010336,0.000027525302,0.00071221084,2.0495587e-7,0.9357909,0.00007199967,0.0000029318742,0.005295418],"study_design_scores_gemma":[0.001058308,0.00009861352,0.0048790807,0.00003731698,0.0000054201087,0.0000073028964,0.00011761939,0.000030153205,0.99186355,0.0016971697,0.00016852249,0.000036922782],"about_ca_topic_score_codex":0.000295563,"about_ca_topic_score_gemma":0.00002550444,"teacher_disagreement_score":0.3418364,"about_ca_system_score_codex":0.000045965637,"about_ca_system_score_gemma":0.000048454844,"threshold_uncertainty_score":0.16061738},"labels":[],"label_agreement":null},{"id":"W2416824570","doi":"10.1007/978-1-4939-1625-2_15","title":"Salmonella Phages and Prophages: Genomics, Taxonomy, and Applied Aspects","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Guelph; Public Health Agency of Canada","funders":"","keywords":"Lytic cycle; Prophage; Taxonomy (biology); Biology; Salmonella; Virology; Phage typing; Microbiology; Bacteriophage; Virus classification; Phage therapy; Typing; Computational biology; Virus; Genetics; Genome; Gene; Bacteria; Zoology; Escherichia coli","score_opus":0.035813853509472054,"score_gpt":0.37162355021687654,"score_spread":0.33580969670740446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416824570","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000094413896,0.911236,0.083208665,0.000016666909,0.00025495578,0.0010358017,0.000014479015,0.00002131364,0.0041177184],"genre_scores_gemma":[0.000011808385,0.68415797,0.3153502,0.000095316245,0.000045970057,0.00016858258,0.00002095322,0.000032895994,0.00011628935],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977092,0.0007831162,0.00042783126,0.0007368843,0.000027788326,0.0003151383],"domain_scores_gemma":[0.99916977,0.00019371996,0.0002258365,0.0003220004,0.000002803434,0.000085883315],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006688514,0.00036804733,0.0011215685,0.000107994616,0.0000590034,0.00003712203,0.00022608043,0.0003949469,0.00020033671],"category_scores_gemma":[0.000058467413,0.0003091343,0.00011137073,0.00013472211,0.00038359544,0.000022683551,0.0005395572,0.00039902804,0.00005573993],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000022443533,0.00001883857,0.0000033266106,0.00052106736,0.000034071654,0.000010526596,0.000020309802,9.556755e-7,0.07081489,0.00023468684,0.000037293572,0.9283018],"study_design_scores_gemma":[0.00011992752,0.00004927576,0.000036478734,0.0001850874,0.00011843404,0.000113700335,0.000006663738,0.0000032335581,0.0011193143,0.00036220026,0.99757266,0.00031300326],"about_ca_topic_score_codex":0.00008752816,"about_ca_topic_score_gemma":0.000023564728,"teacher_disagreement_score":0.9975354,"about_ca_system_score_codex":0.000117813484,"about_ca_system_score_gemma":0.000017236815,"threshold_uncertainty_score":0.9999361},"labels":[],"label_agreement":null},{"id":"W2416838586","doi":"10.1007/978-1-62703-113-4_11","title":"Affinity Purification of RNA Using an ARiBo Tag","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"RNA; Ribozyme; RNA extraction; Riboswitch; Affinity chromatography; Oligonucleotide; Biology; Tandem affinity purification; Molecular biology; Chemistry; Non-coding RNA; Biochemistry; Computational biology; DNA; Gene; Enzyme","score_opus":0.05665956852384099,"score_gpt":0.39964394058494135,"score_spread":0.34298437206110033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416838586","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3739571,0.00072786293,0.6246094,0.000027964883,0.0001574421,0.00012860032,0.000005047665,0.0000045075653,0.00038207692],"genre_scores_gemma":[0.41374806,0.00003636866,0.58593833,0.00013084665,0.00006951372,0.000017295302,0.000030081881,0.000015458041,0.000014015803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99743384,0.0015739955,0.00031886916,0.00029363364,0.00005755782,0.0003221105],"domain_scores_gemma":[0.99915665,0.000038430553,0.00015989039,0.0005105591,0.000053154447,0.00008131527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002035957,0.00015622615,0.00023924375,0.00009303095,0.000032510514,0.000004892736,0.000245905,0.00034363798,0.00003155286],"category_scores_gemma":[0.0004560562,0.00014743593,0.00008972478,0.00013237493,0.00009877645,0.000005652411,0.0000913325,0.000091212176,0.0000018614494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032755368,0.00012288087,0.001304592,0.000009864664,0.00002111173,5.768932e-7,0.000050890067,0.00003689981,0.9823559,0.0022954731,0.0000032164935,0.013765858],"study_design_scores_gemma":[0.00016989221,0.00016297016,0.0003280821,0.0000066640505,0.000015897227,0.000009181531,0.00005417066,0.000072040755,0.99449354,0.0021984056,0.0023254973,0.00016366428],"about_ca_topic_score_codex":0.00004395991,"about_ca_topic_score_gemma":0.000004653999,"teacher_disagreement_score":0.03979096,"about_ca_system_score_codex":0.000013155364,"about_ca_system_score_gemma":0.000041542753,"threshold_uncertainty_score":0.6012263},"labels":[],"label_agreement":null},{"id":"W2416857566","doi":"10.1007/978-1-60761-700-6_17","title":"Measurement of Intracellular pH","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":84,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Intracellular pH; Cytosol; Intracellular; Chemistry; Fluorescence; Biophysics; Microelectrode; Biochemistry; Biology; Enzyme; Electrode","score_opus":0.018234258366484214,"score_gpt":0.3510955832715907,"score_spread":0.33286132490510645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416857566","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6988485,0.00037243328,0.29901272,0.00006756949,0.00070520124,0.00019235385,0.0000050029075,0.000007980964,0.000788233],"genre_scores_gemma":[0.6489952,0.000019082223,0.35068002,0.00011089252,0.00010704114,0.000021371026,0.00001902707,0.000018232462,0.000029095021],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853677,0.00038437734,0.00032782377,0.00037944954,0.000102336344,0.0002692611],"domain_scores_gemma":[0.9991813,0.000011651301,0.000101391626,0.00052552106,0.00012068865,0.000059478865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012847785,0.00016942986,0.00025721232,0.000094724746,0.000019019679,0.0000042538604,0.00028884664,0.0003557467,0.000047987654],"category_scores_gemma":[0.00042600528,0.0001503588,0.00011922844,0.00012784285,0.00017809938,0.0000013418856,0.00011725464,0.00025850555,0.0000018528465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030228866,0.000055004795,0.0028267116,0.000014456032,0.000024176263,0.000004416808,0.000012738946,0.0000042617185,0.97729844,0.0010008214,0.000010303212,0.01871845],"study_design_scores_gemma":[0.00042087326,0.00016086138,0.0008055801,0.0000053274825,0.000020585632,0.000017574888,0.000009993161,0.000006498057,0.9838539,0.00053233904,0.014004095,0.00016239192],"about_ca_topic_score_codex":0.000025781175,"about_ca_topic_score_gemma":0.000044866047,"teacher_disagreement_score":0.05166731,"about_ca_system_score_codex":0.0000071197696,"about_ca_system_score_gemma":0.000075891025,"threshold_uncertainty_score":0.6131454},"labels":[],"label_agreement":null},{"id":"W2416874226","doi":"10.1007/978-1-4939-2848-4_8","title":"Derivation of Equine-Induced Pluripotent Stem Cell Lines Using a piggyBac Transposon Delivery System and Temporal Control of Transgene Expression","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Induced pluripotent stem cell; Embryonic stem cell; Regenerative medicine; Transgene; Biology; Computational biology; Viral vector; Cell biology; Neuroscience; Stem cell; Genetics; Gene","score_opus":0.05273018799613953,"score_gpt":0.36212316950823054,"score_spread":0.309392981512091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416874226","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53823745,0.0021156135,0.45924988,0.0000132849145,0.000063142135,0.00027686107,0.000017089127,0.0000047831722,0.000021889342],"genre_scores_gemma":[0.84085524,0.000062401275,0.1589494,0.000016118733,0.00002822624,0.000020053638,0.00003521374,0.000025518937,0.000007853695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99671173,0.0016886792,0.000643695,0.00047108604,0.00016911063,0.0003156807],"domain_scores_gemma":[0.9989796,0.000058063393,0.00025219502,0.00035821012,0.00023525326,0.0001166754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013777891,0.00022676744,0.00052178936,0.00020353362,0.000024318852,0.000005332258,0.00023389887,0.0003875027,0.0000011501023],"category_scores_gemma":[0.00005558889,0.00020714823,0.00011976583,0.00018825803,0.00013209232,0.0000059979025,0.00008667351,0.00013230077,1.9669187e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052308454,0.00008072529,0.0035034495,0.00029245185,0.000042938325,0.000011229438,0.00009648233,0.0009636207,0.99184126,0.000024501245,9.2369186e-7,0.0026193084],"study_design_scores_gemma":[0.0022689502,0.001008578,0.00009030465,0.00009322575,0.00003846463,0.000017727547,0.0003025548,0.00560356,0.990299,0.000034168304,0.00006184219,0.0001816184],"about_ca_topic_score_codex":0.00013686898,"about_ca_topic_score_gemma":0.000009740288,"teacher_disagreement_score":0.30261776,"about_ca_system_score_codex":0.00003739846,"about_ca_system_score_gemma":0.00014297807,"threshold_uncertainty_score":0.84472597},"labels":[],"label_agreement":null},{"id":"W2416937497","doi":"10.1007/978-1-4939-0703-8_7","title":"Ribotyping and Automated Ribotyping of Listeria monocytogenes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Ribotyping; EcoRI; Restriction enzyme; Operon; Ribosomal RNA; Biology; Lysis; Molecular biology; DNA; Microbiology; Polymerase chain reaction; Genetics; Escherichia coli; Gene","score_opus":0.019826892691224344,"score_gpt":0.4082773330666017,"score_spread":0.38845044037537735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416937497","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2065459,0.00094903895,0.7912924,0.00009799022,0.00005439219,0.0002000811,0.0000069440634,0.000050127805,0.00080306403],"genre_scores_gemma":[0.32915053,0.00015971261,0.67013484,0.00033402254,0.000031542695,0.00006870384,0.000072820854,0.000024234063,0.000023625682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997998,0.00079915894,0.00038483957,0.000505939,0.000034591434,0.00027749073],"domain_scores_gemma":[0.99919134,0.000050557526,0.00015330028,0.0004895576,0.00005789375,0.000057322522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009867207,0.00019624762,0.00032292734,0.0001213829,0.00004580682,0.000007799746,0.000242607,0.00036960162,0.0000056371246],"category_scores_gemma":[0.00031927094,0.00019314508,0.000081855374,0.00016356936,0.00025997258,0.0000018438606,0.00027347004,0.000108052656,8.161545e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023920244,0.00002538951,0.0028250774,0.000019465684,0.000027378826,8.168472e-7,0.000011074293,0.000026025033,0.97141045,0.00915677,0.000020871432,0.01645274],"study_design_scores_gemma":[0.00037187283,0.00026085656,0.0016569041,0.000020474865,0.000017193273,0.000026326894,0.000011377654,0.0024521444,0.97486377,0.0046083857,0.015468826,0.00024185969],"about_ca_topic_score_codex":0.000036180183,"about_ca_topic_score_gemma":0.00001059789,"teacher_disagreement_score":0.12260461,"about_ca_system_score_codex":0.000008294897,"about_ca_system_score_gemma":0.000024125122,"threshold_uncertainty_score":0.7876228},"labels":[],"label_agreement":null},{"id":"W2416958405","doi":"10.1007/978-1-61779-567-1_3","title":"Identification of Enzyme-Converted Peptide Products from Single Cells Using Capillary Electrophoresis and Liquid Chromatography-Mass Spectrometry","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chromatography; Capillary electrophoresis; Chemistry; Mass spectrometry; Analyte; Capillary electrophoresis–mass spectrometry; Liquid chromatography–mass spectrometry; Peptide; Flow cytometry; Biochemistry; Molecular biology; Electrospray ionization; Biology","score_opus":0.016918148735370488,"score_gpt":0.31782651176310334,"score_spread":0.30090836302773283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2416958405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.609375,0.0030825115,0.3868938,0.000036536272,0.000042500928,0.00012743827,0.00002263487,0.000050447587,0.00036911477],"genre_scores_gemma":[0.5180083,0.0001713352,0.4816656,0.000018827142,0.000045843666,0.000025554848,0.0000309482,0.000022526361,0.0000110628725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981672,0.0002958554,0.0005386306,0.00047559323,0.00009750088,0.00042518534],"domain_scores_gemma":[0.9987747,0.00015959967,0.00031185377,0.0006101667,0.00006594557,0.0000777367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006267508,0.00022082296,0.00040335662,0.00033738711,0.000047609366,0.000013444,0.00024185039,0.0002708967,0.00026460574],"category_scores_gemma":[0.0001767065,0.00023146706,0.00008768693,0.0007994628,0.00017805216,0.000051335915,0.00009126595,0.0002310407,0.0000012981434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024837625,0.00014654957,0.002142229,0.000060412964,0.000059721853,0.0000015682732,0.00004859336,0.0000012469696,0.9954972,0.0015979226,0.0000108386175,0.00040887776],"study_design_scores_gemma":[0.00015603613,0.00006174799,0.00020617073,0.00001712854,0.000058909,0.000008960963,0.000039096987,0.00026443592,0.9940263,0.0045738057,0.00036637805,0.00022102454],"about_ca_topic_score_codex":0.00018485787,"about_ca_topic_score_gemma":0.0000017131903,"teacher_disagreement_score":0.09477178,"about_ca_system_score_codex":0.00008563499,"about_ca_system_score_gemma":0.000026037107,"threshold_uncertainty_score":0.9438953},"labels":[],"label_agreement":null},{"id":"W2417007123","doi":"10.1007/978-1-62703-478-4_9","title":"Directed Differentiation of Embryonic Stem Cells to the T-Lymphocyte Lineage","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Hemangioblast; Cell biology; Biology; Haematopoiesis; Embryonic stem cell; Embryoid body; Stem cell; Stromal cell; Cellular differentiation; Bone marrow; Immunology; Adult stem cell; Genetics; Cancer research","score_opus":0.01726430424401277,"score_gpt":0.3648296542970878,"score_spread":0.34756535005307504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417007123","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28305787,0.000534246,0.71468127,0.00080300996,0.000096931486,0.0006532145,0.000015516922,0.000013432927,0.00014453084],"genre_scores_gemma":[0.4232936,0.00030263228,0.5726096,0.0013980347,0.0001412035,0.001075215,0.00015552549,0.000054539883,0.00096968596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782145,0.0010146926,0.00031418036,0.00039404942,0.000114095215,0.00034152323],"domain_scores_gemma":[0.9988789,0.00013504349,0.00009339075,0.0006388644,0.00013677745,0.00011705482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008000126,0.00014164235,0.00020766919,0.00011306119,0.00003790812,0.000013337997,0.0005263776,0.00021879145,0.000048378122],"category_scores_gemma":[0.0003970509,0.00010248035,0.00009063221,0.0004143228,0.00016187021,0.0000019104448,0.00032266063,0.00013838334,0.000036921778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015319609,0.00004814735,0.0001582971,0.0000086604505,0.000030495281,4.3391086e-7,0.000017507215,0.000021820926,0.9582082,0.00029776766,0.00040278112,0.04079054],"study_design_scores_gemma":[0.0002892599,0.0001746702,0.0017270349,0.0000065205477,0.000007116108,0.0000015184452,0.000021493837,0.0007708399,0.97747886,0.00032953086,0.019083926,0.00010923372],"about_ca_topic_score_codex":0.000099169774,"about_ca_topic_score_gemma":0.00003172735,"teacher_disagreement_score":0.14207168,"about_ca_system_score_codex":0.000030313782,"about_ca_system_score_gemma":0.00008274405,"threshold_uncertainty_score":0.41790274},"labels":[],"label_agreement":null},{"id":"W2417013543","doi":"10.1007/978-1-4939-0799-1_17","title":"Replicative and Chronological Life-Span Assays","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Biology; Life span; Longevity; Yeast; Gene; Cell division; CLs upper limits; Genetics; Cell biology; Cell; Evolutionary biology; Medicine","score_opus":0.018600264889277577,"score_gpt":0.3535113282796418,"score_spread":0.33491106339036425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417013543","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22014448,0.001134709,0.77671236,0.00043577753,0.00011998176,0.00016422129,0.0000034569573,0.000019220493,0.0012657841],"genre_scores_gemma":[0.48787642,0.00021848883,0.5102705,0.0013406348,0.00011320917,0.000038652342,0.00003816228,0.000026867243,0.0000770854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99711394,0.0013358975,0.00030838538,0.0007843479,0.000057671776,0.00039974606],"domain_scores_gemma":[0.9989748,0.00008172053,0.00010408621,0.0006474364,0.000053897333,0.00013803843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013513432,0.00024201574,0.00033765912,0.00008358113,0.00006115568,0.000017649978,0.00030771748,0.000453695,0.000022965298],"category_scores_gemma":[0.0013966868,0.00022433918,0.00007811235,0.00010119561,0.00036988573,0.0000017904736,0.00033931923,0.00022811034,0.0000072470584],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024180134,0.000045210676,0.006628089,0.000009955894,0.000034670713,0.0000022666748,0.0000764134,0.000070623464,0.96891963,0.0041359775,0.00006422286,0.019988725],"study_design_scores_gemma":[0.0012264479,0.0016022474,0.012287045,0.000010672077,0.000041562133,0.00005145662,0.00007691554,0.0015892623,0.9023925,0.024403693,0.05560801,0.00071016594],"about_ca_topic_score_codex":0.000027137998,"about_ca_topic_score_gemma":0.000018013774,"teacher_disagreement_score":0.26773193,"about_ca_system_score_codex":0.000013903848,"about_ca_system_score_gemma":0.00003969202,"threshold_uncertainty_score":0.9148286},"labels":[],"label_agreement":null},{"id":"W2417084410","doi":"10.1007/978-1-59745-157-4_18","title":"Analysis of Phosphoinositide Dynamics During Phagocytosis Using Genetically Encoded Fluorescent Biosensors","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Phagocytosis; Cell biology; Green fluorescent protein; Phagosome; Fusion protein; Cytosol; Biosensor; Biology; Chemistry; Biochemistry; Recombinant DNA; Gene","score_opus":0.01833502104379679,"score_gpt":0.32661209280700393,"score_spread":0.3082770717632071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417084410","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5303066,0.00050842244,0.46897203,0.000007916311,0.000048951435,0.000090425834,0.00001826483,0.0000055953888,0.00004183347],"genre_scores_gemma":[0.6791643,0.00035395555,0.31955692,0.000044408294,0.000019351572,0.0000070586248,0.0008151046,0.000022683256,0.00001623639],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979076,0.0005028848,0.00055437087,0.0005556262,0.00010950641,0.0003700218],"domain_scores_gemma":[0.9991617,0.000025660333,0.00015361991,0.00048186697,0.00009354502,0.00008357075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042524756,0.00023539222,0.000517105,0.00040013224,0.000062773186,0.0000037926918,0.00023288818,0.00034646757,0.000023385335],"category_scores_gemma":[0.00009710278,0.0002471177,0.0003794655,0.00072229106,0.00027934075,0.0000021723124,0.00009079226,0.00013625462,3.3498694e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011410286,0.00007649244,0.08871136,0.000014694745,0.00041830054,0.000041676696,0.00005272166,0.0030174989,0.9069884,0.00012407207,1.4383339e-7,0.00044058065],"study_design_scores_gemma":[0.00050476857,0.00011255582,0.015058781,0.000007783997,0.0003178575,0.000026013922,0.000027539438,0.01631696,0.96727425,0.00004182851,0.000055214412,0.00025642698],"about_ca_topic_score_codex":0.00015321004,"about_ca_topic_score_gemma":0.000093262795,"teacher_disagreement_score":0.14941509,"about_ca_system_score_codex":0.00005444533,"about_ca_system_score_gemma":0.00006360709,"threshold_uncertainty_score":0.9999981},"labels":[],"label_agreement":null},{"id":"W2417100539","doi":"10.1007/978-1-4939-1568-2_3","title":"Mast Cell Development and Function in the Zebrafish","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Zebrafish; Biology; Mast cell; Morpholino; Model organism; Cell biology; Transgene; Gene knockdown; Computational biology; Immunology; Gene; Genetics","score_opus":0.01803233147099558,"score_gpt":0.3619125185187356,"score_spread":0.34388018704774004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417100539","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19827133,0.00037180507,0.79832655,0.0005892574,0.0000396113,0.00023178551,0.0000013766005,0.0000052704627,0.0021630144],"genre_scores_gemma":[0.5185667,0.00004932316,0.47849512,0.0023325644,0.000066739645,0.00028464664,0.00009732946,0.000019037128,0.00008850116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978758,0.0011236353,0.00022823698,0.00038486675,0.000086249325,0.00030117616],"domain_scores_gemma":[0.99941534,0.00012537524,0.000041238167,0.00033059253,0.00002550791,0.000061925464],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024610746,0.00011765096,0.0001294239,0.00010351603,0.00004434381,0.000014979331,0.00028077848,0.00020039645,0.00000961323],"category_scores_gemma":[0.0005606964,0.00009014847,0.000028344546,0.00023186071,0.00017672962,0.0000015428105,0.00016714785,0.0001960671,0.000005777516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002115696,0.00006018609,0.001895603,0.000010013963,0.0000064903675,0.0000016415347,0.00004945114,0.0000027041622,0.9095815,0.0021744934,0.000106378844,0.08609039],"study_design_scores_gemma":[0.00080046017,0.0003096865,0.011499263,0.000006878888,0.0000056001945,0.000009780839,0.000113170085,0.0001520788,0.5856201,0.0066015343,0.3946726,0.00020882834],"about_ca_topic_score_codex":0.00001568867,"about_ca_topic_score_gemma":0.000056167188,"teacher_disagreement_score":0.3945662,"about_ca_system_score_codex":0.000013757344,"about_ca_system_score_gemma":0.00005195986,"threshold_uncertainty_score":0.36761478},"labels":[],"label_agreement":null},{"id":"W2417125774","doi":"10.1007/978-1-62703-980-2_10","title":"Efficient Splinted Ligation of Synthetic RNA Using RNA Ligase","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Northern British Columbia","funders":"","keywords":"RNA; DNA ligase; Ethidium bromide; RNA ligase; Ligation; Molecular biology; Chemistry; DNA; Biology; Computational biology; Biochemistry; Gene","score_opus":0.019759603869755924,"score_gpt":0.35217199320633397,"score_spread":0.332412389336578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417125774","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41497543,0.00030333071,0.58408815,0.000036459605,0.00013686667,0.0001446796,0.0000025312802,0.000006068837,0.00030649235],"genre_scores_gemma":[0.54797083,0.0000132595915,0.45181736,0.00010241369,0.00003858274,0.000015338403,0.000009649735,0.000020231935,0.000012285851],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972652,0.0014485904,0.00043457546,0.0004638767,0.000088821864,0.00029888697],"domain_scores_gemma":[0.99902624,0.00009111949,0.00020689858,0.0005311871,0.0000808013,0.000063751395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002043824,0.00019947473,0.00033431663,0.00014734222,0.000037074205,0.000007228712,0.0002845776,0.00033366217,0.000019316798],"category_scores_gemma":[0.0010711742,0.00018899201,0.00014468556,0.00019551741,0.00013972893,0.0000013624893,0.00014681861,0.000104806146,0.0000030361798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005161362,0.000053705047,0.000064213884,0.00002098004,0.00002546997,0.0000019505278,0.000023269084,0.0015189446,0.9652346,0.004945232,8.9309856e-7,0.028059172],"study_design_scores_gemma":[0.00031607295,0.00026887006,0.000027199594,0.00004382444,0.000023976134,0.0000107970445,0.00001937728,0.007771098,0.9833465,0.007660887,0.00031555933,0.00019581094],"about_ca_topic_score_codex":0.000027723929,"about_ca_topic_score_gemma":0.00000259269,"teacher_disagreement_score":0.13299544,"about_ca_system_score_codex":0.00001763755,"about_ca_system_score_gemma":0.00004131594,"threshold_uncertainty_score":0.77068704},"labels":[],"label_agreement":null},{"id":"W2417133791","doi":"10.1007/978-1-4939-1594-1_14","title":"Gene Expression Analysis in Early Embryos Through Reverse Transcription Quantitative PCR (RT-qPCR)","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Biology; Reverse transcriptase; Embryo; Computational biology; Transcriptome; Gene expression; Real-time polymerase chain reaction; Reverse transcription polymerase chain reaction; Gene; Transcription (linguistics); Messenger RNA; Cell biology; Genetics; RNA","score_opus":0.029276155707349583,"score_gpt":0.3962691127612719,"score_spread":0.3669929570539223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417133791","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27183637,0.00047276804,0.72647995,0.00015434835,0.000059233655,0.00032021047,0.000015692696,0.000022884517,0.0006385802],"genre_scores_gemma":[0.29751638,0.00019577771,0.70100176,0.0006418933,0.000034034114,0.0002200176,0.0002985316,0.000027393677,0.000064195745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958232,0.0021387555,0.0005596166,0.0009422363,0.00008196725,0.00045421635],"domain_scores_gemma":[0.9988241,0.000065127,0.00017379656,0.00079395087,0.00007478297,0.00006821741],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013809481,0.000306671,0.00050844636,0.00032408876,0.000063709536,0.000013513914,0.00040844834,0.0006364453,0.000022739556],"category_scores_gemma":[0.00028987197,0.00029744295,0.0002933148,0.0008131208,0.00022103844,0.000006822225,0.00013965389,0.00029247272,0.00000552557],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008125447,0.00009915279,0.005895477,0.000007505887,0.00009215838,0.0000054477614,0.00010034773,0.00023630027,0.98615146,0.0054660575,0.000041196312,0.0018236554],"study_design_scores_gemma":[0.0006608966,0.00041890153,0.0028554304,0.000013510918,0.00008764582,0.0000051849925,0.00004016965,0.0004396871,0.9785091,0.008575332,0.008025626,0.00036846363],"about_ca_topic_score_codex":0.00022282022,"about_ca_topic_score_gemma":0.00012155654,"teacher_disagreement_score":0.02568001,"about_ca_system_score_codex":0.000031886702,"about_ca_system_score_gemma":0.000032369848,"threshold_uncertainty_score":0.9999478},"labels":[],"label_agreement":null},{"id":"W2417160687","doi":"10.1007/978-1-4939-2428-8_19","title":"Health Economics in Clinical Research","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Health care; Scarcity; Economic evaluation; Medicine; Health economics; Cost–benefit analysis; Clinical trial; Resource (disambiguation); Outcome (game theory); Risk analysis (engineering); Business; Intensive care medicine; Economics; Computer science; Economic growth; Political science","score_opus":0.8444858637423194,"score_gpt":0.7113032856774846,"score_spread":0.1331825780648348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417160687","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18856968,0.013461661,0.6649971,0.11541982,0.0026697416,0.0016753819,0.000084946914,0.000052970114,0.013068685],"genre_scores_gemma":[0.024255589,0.0006906368,0.9540789,0.020186162,0.00029295337,0.00018104771,0.000037095524,0.00005280044,0.0002247776],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9767615,0.014854978,0.00646677,0.0009844864,0.000045994406,0.0008862291],"domain_scores_gemma":[0.994763,0.0030220582,0.0010725308,0.0007493431,0.00006731657,0.00032572116],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.2408175,0.00016297106,0.0015168769,0.0010049308,0.0000522626,0.00002872632,0.0004904822,0.00039448,0.00005071561],"category_scores_gemma":[0.02426598,0.0002142569,0.00011474758,0.00047099113,0.00024808937,0.000102965314,0.00019219313,0.0007439007,0.00059548684],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000402326,0.00024195791,0.31737003,0.00007958687,0.000031894597,0.000006652888,0.0013188093,0.00041632558,0.000013878797,0.66576684,0.00418908,0.010524723],"study_design_scores_gemma":[0.0023648567,0.0005076836,0.022757087,0.00004918671,9.64406e-7,0.000009314796,0.0010204723,0.0071350443,0.000031026477,0.75610775,0.20959167,0.00042494762],"about_ca_topic_score_codex":0.002996937,"about_ca_topic_score_gemma":0.00091488165,"teacher_disagreement_score":0.2946129,"about_ca_system_score_codex":0.0011568428,"about_ca_system_score_gemma":0.00070830423,"threshold_uncertainty_score":0.98395306},"labels":[],"label_agreement":null},{"id":"W2417173174","doi":"10.1007/978-1-62703-128-8_20","title":"Isolation, Enumeration, and Expansion of Human Mesenchymal Stem Cells in Culture","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Mesenchymal stem cell; Cell biology; Clinical uses of mesenchymal stem cells; Stem cell transplantation for articular cartilage repair; Stem cell; Biology; Stromal cell; Multipotent Stem Cell; Paracrine signalling; Immunology; Bone marrow; Adult stem cell; Chemistry; Endothelial stem cell; Cancer research; In vitro; Progenitor cell; Biochemistry","score_opus":0.05072366977252033,"score_gpt":0.44420310949010633,"score_spread":0.393479439717586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417173174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77121955,0.0024019408,0.22444774,0.000101083824,0.00009431934,0.0004332109,0.0000017892191,0.0000088479865,0.0012914976],"genre_scores_gemma":[0.7010721,0.000066030756,0.29845893,0.0000770338,0.000037255326,0.000021519065,0.000011429608,0.000012373531,0.0002433149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975466,0.0013749393,0.00040155958,0.00023968314,0.00012246403,0.00031473453],"domain_scores_gemma":[0.9993612,0.00013887923,0.00007813752,0.0002354636,0.000084355976,0.000101975056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002220928,0.000121309655,0.0003631544,0.00025738214,0.000026119096,0.0000038565713,0.00007222173,0.0002505217,0.00006703325],"category_scores_gemma":[0.00018041587,0.00009962377,0.00003957614,0.00032950327,0.00011259867,0.000042019168,0.00008289528,0.00027022752,0.0000028522586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028986904,0.000057311176,0.111866355,0.00006284658,0.0000093121525,0.0000073457236,0.0008399652,0.0000027995493,0.8795501,0.001823489,0.000014009245,0.005737499],"study_design_scores_gemma":[0.0008501524,0.00032348026,0.017320752,0.00005111507,0.0000128322245,0.000019446987,0.00025926775,0.00026852413,0.9792088,0.0007565609,0.0008204235,0.00010859621],"about_ca_topic_score_codex":0.00007769617,"about_ca_topic_score_gemma":0.000009587592,"teacher_disagreement_score":0.09965877,"about_ca_system_score_codex":0.000045574754,"about_ca_system_score_gemma":0.000036818044,"threshold_uncertainty_score":0.40625393},"labels":[],"label_agreement":null},{"id":"W2417219975","doi":"10.1007/978-1-61779-516-9_5","title":"Extraction of DNA from Paleofeces","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Ancient DNA; DNA; Extant taxon; DNA extraction; Biology; Fauna; DNA polymerase; Evolutionary biology; Polymerase chain reaction; Paleontology; Ecology; Genetics; Gene; Medicine","score_opus":0.047554719923067514,"score_gpt":0.42676328564031546,"score_spread":0.3792085657172479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417219975","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49486393,0.0011741527,0.4988903,0.00001657894,0.0001469777,0.00010011727,0.00000839087,0.0000038980925,0.0047956603],"genre_scores_gemma":[0.38438433,0.00013310692,0.61519414,0.000073174306,0.000040640258,0.000018395784,0.00005023018,0.000013097778,0.00009285674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983946,0.0007053482,0.0002640265,0.00034819188,0.000059115395,0.00022870467],"domain_scores_gemma":[0.9993796,0.000044802007,0.000082489205,0.0003905992,0.00005650206,0.00004602237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006353598,0.00011802878,0.0001962357,0.00008306728,0.00001549843,0.0000023514199,0.00022384494,0.0002563839,0.00013136648],"category_scores_gemma":[0.0002760006,0.00010739019,0.000086145665,0.00011237809,0.00023839441,0.0000012838882,0.00008935445,0.000108471184,0.0000048962775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008391267,0.00005017228,0.009266209,0.000004989083,0.00003765052,0.000005540706,0.0000703656,0.0000025521847,0.9622337,0.0005707858,0.00003191276,0.027642176],"study_design_scores_gemma":[0.00028919717,0.0003036283,0.01139821,0.0000056117888,0.000008286303,0.0000047626577,0.00007629749,0.000023955896,0.97671974,0.008117529,0.0029398715,0.00011288756],"about_ca_topic_score_codex":0.00027515384,"about_ca_topic_score_gemma":0.000044527027,"teacher_disagreement_score":0.11630385,"about_ca_system_score_codex":0.000005152912,"about_ca_system_score_gemma":0.00003876087,"threshold_uncertainty_score":0.43792447},"labels":[],"label_agreement":null},{"id":"W2417263679","doi":"10.1007/978-1-60761-759-4_1","title":"The Identification of Colon Cancer Susceptibility Genes by Using Genome-Wide Scans","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic factors in colorectal cancer","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Identification (biology); Genome; Computational biology; Colorectal cancer; Biology; Gene; Genetics; Cancer; Botany","score_opus":0.07023066661877239,"score_gpt":0.4847315294068883,"score_spread":0.41450086278811593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417263679","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0023552387,0.90230256,0.092769034,0.000035277997,0.0010165763,0.0013883306,0.00008458377,0.000012140507,0.000036239344],"genre_scores_gemma":[0.000048179332,0.88442445,0.11493152,0.00004756377,0.00006412485,0.00027570542,0.000075947944,0.000055066535,0.00007746953],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951555,0.0023699626,0.0012783103,0.0006620929,0.00014996191,0.00038413724],"domain_scores_gemma":[0.997087,0.0008853939,0.00079362554,0.0009773357,0.00018498444,0.000071680035],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0031602948,0.00035892052,0.0015610442,0.00017117709,0.00006792891,0.00001134575,0.0004516209,0.00088496774,0.00005542199],"category_scores_gemma":[0.0013710379,0.00024821397,0.00037430853,0.00048101487,0.0006338911,0.000008117928,0.00016346255,0.0007547039,0.0000017509109],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015593616,0.000025932353,0.00044253666,0.0013356298,0.00008922001,0.0000017248631,0.000014541496,0.0000043325417,0.3699063,0.000009304492,0.0000075136772,0.62814736],"study_design_scores_gemma":[0.000228237,0.00015440493,0.00006993258,0.0006891646,0.0008695214,0.000022621805,0.000012280501,0.00006767521,0.049648285,0.0003200102,0.9476101,0.00030779323],"about_ca_topic_score_codex":0.00025682864,"about_ca_topic_score_gemma":0.0001952396,"teacher_disagreement_score":0.94760257,"about_ca_system_score_codex":0.00041803555,"about_ca_system_score_gemma":0.00071300607,"threshold_uncertainty_score":0.999997},"labels":[],"label_agreement":null},{"id":"W2417280822","doi":"10.1007/978-1-4939-0363-4_6","title":"Microfluidic-Based Manufacture of siRNA-Lipid Nanoparticles for Therapeutic Applications","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Innovative Microfluidic and Catalytic Techniques Innovation","field":"Engineering","cited_by":55,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Precision Nanosystems (Canada); University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Microfluidics; Dispersity; Nanotechnology; Small interfering RNA; Nanoparticle; RNA; RNA interference; Materials science; Chemistry; Biochemistry; Organic chemistry","score_opus":0.01728395204601613,"score_gpt":0.34249646117284926,"score_spread":0.32521250912683314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417280822","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0052534617,0.0012990542,0.992416,0.00010016692,0.00008796849,0.00043762033,0.000014183449,0.00009941293,0.00029208913],"genre_scores_gemma":[0.27427155,0.00002754587,0.7247806,0.000430718,0.000031130072,0.00035798096,0.00006154512,0.000031306405,0.0000075916996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991075,0.00014408708,0.00034259446,0.0001752411,0.000032635635,0.00019796687],"domain_scores_gemma":[0.99941975,0.00015690357,0.000057743302,0.00027395703,0.0000774786,0.000014174766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008586849,0.00013155064,0.0002276189,0.0001720053,0.00002125126,0.000003861555,0.00017877117,0.00016186481,0.000009176999],"category_scores_gemma":[0.000047688092,0.00012528364,0.00005453514,0.00032925655,0.00011343731,0.000013257347,0.000017331437,0.00010854504,0.0000011530035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006649117,0.00001630849,0.000058625334,0.000053138083,0.000014794536,7.439398e-8,0.000014857087,0.000031969892,0.85972786,0.041865353,0.0001285113,0.09808188],"study_design_scores_gemma":[0.00025055892,0.00006337692,0.000039997874,0.000008181986,0.000009850427,9.029235e-7,0.0000063189937,0.0009257331,0.89108527,0.022639537,0.08485657,0.000113703965],"about_ca_topic_score_codex":0.000002237003,"about_ca_topic_score_gemma":1.15752336e-7,"teacher_disagreement_score":0.26901808,"about_ca_system_score_codex":0.000035832225,"about_ca_system_score_gemma":0.00001466227,"threshold_uncertainty_score":0.5108918},"labels":[],"label_agreement":null},{"id":"W2417368735","doi":"10.1007/978-1-61779-160-4_11","title":"Analysis of GPCR/Ion Channel Interactions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; University of Calgary","funders":"Canadian Institutes of Health Research; National Science Foundation","keywords":"G protein-coupled receptor; Ion channel; Calcium channel; Voltage-dependent calcium channel; Cell biology; Calcium signaling; Calcium; Chemistry; Second messenger system; SUPERFAMILY; Biophysics; Receptor; Signal transduction; Biology; Biochemistry","score_opus":0.04884286050643631,"score_gpt":0.3881883095911522,"score_spread":0.33934544908471587,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417368735","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.092679396,0.00017423944,0.9036316,0.000028286582,0.0005162014,0.00009126718,0.000007679766,0.000008231488,0.0028630681],"genre_scores_gemma":[0.8016313,0.000054962955,0.19746181,0.00021563591,0.00007552467,0.000035247813,0.00022680538,0.00001672365,0.0002820259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987121,0.0004887672,0.00029702712,0.0003009197,0.000040570383,0.00016056857],"domain_scores_gemma":[0.9994324,0.000021357038,0.00012308071,0.00029864162,0.00008683716,0.000037726713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005347602,0.00011347536,0.00023340713,0.00045518484,0.000021959502,0.0000022635763,0.00012434498,0.00017615336,0.00012802766],"category_scores_gemma":[0.00017977468,0.000109810426,0.00019106107,0.00057617325,0.0000847902,0.0000024769006,0.000072254246,0.000081550046,0.0000023380053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008726857,0.00008819312,0.0041753543,0.0000042344645,0.0003300009,0.0000013197529,0.00014488894,0.00047377017,0.988461,0.001356232,0.000025798903,0.0048519284],"study_design_scores_gemma":[0.00032488827,0.00023764285,0.0080362465,0.0000047014314,0.00017515857,0.00000494598,0.00012721942,0.004123939,0.98050267,0.0015656191,0.004717105,0.00017986138],"about_ca_topic_score_codex":0.00006570368,"about_ca_topic_score_gemma":0.00004025076,"teacher_disagreement_score":0.7089519,"about_ca_system_score_codex":0.000011623404,"about_ca_system_score_gemma":0.000018158566,"threshold_uncertainty_score":0.44779393},"labels":[],"label_agreement":null},{"id":"W2417422090","doi":"10.1007/978-1-60761-697-9_14","title":"Calculation of Cellular Oxygen Concentration for Photodynamic Therapy In Vitro","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photodynamic Therapy Research Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Juravinski Cancer Centre","funders":"","keywords":"Monolayer; Singlet oxygen; Photodynamic therapy; Oxygen; Biophysics; In vitro; Chemistry; Hypoxia (environmental); Limiting; Fluence; Limiting oxygen concentration; Diffusion; Materials science; Biochemistry; Biology; Thermodynamics; Physics; Ion","score_opus":0.024448157580111148,"score_gpt":0.4226368632300687,"score_spread":0.39818870564995756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417422090","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6827317,0.00046375845,0.31555298,0.00017300251,0.000108277025,0.0008848249,0.0000080315385,0.000009124762,0.00006829848],"genre_scores_gemma":[0.70491713,0.00012296475,0.2945993,0.00010266412,0.000018994146,0.00014882856,0.000058923204,0.000015001863,0.000016184695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985646,0.000456911,0.00034909198,0.00027011544,0.00008076088,0.00027850995],"domain_scores_gemma":[0.9992356,0.00028686415,0.00008919181,0.0002558309,0.00009473639,0.000037816957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014561468,0.00012499819,0.00040022403,0.0001844289,0.000017535936,0.0000025901272,0.00010295576,0.0001974383,0.00001625275],"category_scores_gemma":[0.00056663324,0.0001077745,0.00009601956,0.0002424794,0.00017586486,0.000017051929,0.000025967776,0.00026862728,3.645657e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073247694,0.00009971105,0.0010821961,0.000026384145,0.000043109583,0.0000064216247,0.00018361003,0.000009612705,0.9652384,0.0005907835,9.735777e-7,0.031986356],"study_design_scores_gemma":[0.0024783325,0.00032871612,0.004266323,0.000011840415,0.000007399904,0.0000034094762,0.000022404602,0.007847601,0.9803804,0.004181057,0.0003856305,0.00008689105],"about_ca_topic_score_codex":0.00012082553,"about_ca_topic_score_gemma":0.00004098844,"teacher_disagreement_score":0.031899467,"about_ca_system_score_codex":0.00005665677,"about_ca_system_score_gemma":0.000079089645,"threshold_uncertainty_score":0.43949166},"labels":[],"label_agreement":null},{"id":"W2417422129","doi":"10.1007/978-1-4939-2957-3_14","title":"Combining the Optimized Yeast Cytosine Deaminase Protein Fragment Complementation Assay and an In Vitro Cdk1 Targeting Assay to Study the Regulation of the γ-Tubulin Complex","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal","funders":"","keywords":"Cyclin-dependent kinase 1; Protein-fragment complementation assay; Cyclin-dependent kinase complex; Biology; Cell biology; Cyclin B; Cyclin B1; Saccharomyces cerevisiae; Cyclin A; Biochemistry; Cyclin; Cell cycle; Molecular biology; Chemistry; Yeast; Complementation; Cell","score_opus":0.05938830884972089,"score_gpt":0.4158533191668675,"score_spread":0.3564650103171466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417422129","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8257019,0.00019015653,0.17190449,0.00073803024,0.000053371034,0.0013433986,0.000012352676,0.0000030370193,0.000053273776],"genre_scores_gemma":[0.8015022,0.0000028729403,0.19805865,0.00016652227,0.000028347957,0.00014793394,0.00006548186,0.0000136908475,0.000014290664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9924737,0.0063291765,0.0003935985,0.0003590039,0.00018290244,0.00026159018],"domain_scores_gemma":[0.9991477,0.000096785385,0.00012745969,0.0004414241,0.00012437525,0.000062246385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00639158,0.00015357239,0.00021440156,0.0000690534,0.00009828753,0.000022724369,0.00039857058,0.00009253627,0.000006335016],"category_scores_gemma":[0.0007815817,0.00009000843,0.00004137684,0.00028656062,0.00016777356,0.0000029962857,0.00048292978,0.00018957062,4.7782044e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030025837,0.00015624297,0.0026651423,0.0000050414865,0.00002844463,0.0000011037662,0.0007203261,0.001826765,0.98846066,0.000097155935,0.000011619361,0.005727255],"study_design_scores_gemma":[0.0016330725,0.0006057945,0.010273842,0.000008901064,0.0000133271615,0.0000032569353,0.0017025426,0.0064126733,0.97827506,0.0006353255,0.00030991386,0.00012626115],"about_ca_topic_score_codex":0.00020469708,"about_ca_topic_score_gemma":0.00008562833,"teacher_disagreement_score":0.026154162,"about_ca_system_score_codex":0.000028535213,"about_ca_system_score_gemma":0.000056784793,"threshold_uncertainty_score":0.3670437},"labels":[],"label_agreement":null},{"id":"W2417484337","doi":"10.1007/978-1-62703-299-5_21","title":"Linking RNA Measurements and Proteomics with Genome-Scale Models","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Computational biology; Proteomics; Biology; Scale (ratio); Genome; Computer science; Genetics; Geography; Gene; Cartography","score_opus":0.019934847767705252,"score_gpt":0.2969471750886155,"score_spread":0.27701232732091025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417484337","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41759074,0.00078556326,0.58105415,0.00005620522,0.00006308693,0.00026361406,0.0000013200195,0.000009446145,0.00017588364],"genre_scores_gemma":[0.1825103,0.00011625149,0.81693965,0.0001424444,0.00008841863,0.00008263981,0.000028801647,0.000024432069,0.00006707104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99882907,0.00024239259,0.00018703112,0.0004339671,0.000045967136,0.0002615674],"domain_scores_gemma":[0.99953896,0.00000307678,0.000055127864,0.00027831946,0.00007052046,0.00005397082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005571382,0.00016792212,0.00019076958,0.00007790273,0.000033061293,0.000017599084,0.00012223923,0.00019547065,0.000004598726],"category_scores_gemma":[0.00004572735,0.00013958104,0.000031747302,0.000110774075,0.00008491171,0.0000045342813,0.000088052555,0.00012990685,0.0000015538219],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017462007,0.00001989023,0.0006343756,0.000016350335,0.00002668307,5.5365166e-7,0.000029906825,0.0011258352,0.989023,0.000048194266,0.000002940241,0.009054829],"study_design_scores_gemma":[0.00038672658,0.00017721052,0.00044260625,0.000013561489,0.000012265911,0.000025354888,0.000013777393,0.00045362674,0.9958644,0.0011241788,0.0012683455,0.00021795968],"about_ca_topic_score_codex":0.000047968857,"about_ca_topic_score_gemma":0.000008240844,"teacher_disagreement_score":0.23588549,"about_ca_system_score_codex":0.00001168525,"about_ca_system_score_gemma":0.000021579326,"threshold_uncertainty_score":0.5691949},"labels":[],"label_agreement":null},{"id":"W2417500499","doi":"10.1007/978-1-61779-337-0_7","title":"Kinase Inhibitor Selectivity Profiling Using Differential Scanning Fluorimetry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":178,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Enzyme; Chemistry; Virtual screening; Drug discovery; Kinase; Combinatorial chemistry; Computational biology; Target protein; Ligand binding assay; Selectivity; Substrate (aquarium); Fluorescence spectroscopy; Biochemistry; Fluorescence; Biophysics; Biology; Receptor","score_opus":0.043904716547940675,"score_gpt":0.368986993629731,"score_spread":0.32508227708179027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417500499","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49361828,0.00008240141,0.5051309,0.0000016091237,0.0007890034,0.00007699056,0.0000016350394,0.000029723293,0.00026947627],"genre_scores_gemma":[0.42031777,6.7049945e-7,0.57952964,0.00003399278,0.00009189842,0.000006974689,0.0000025716997,0.000011768128,0.0000046885366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99763495,0.0012507302,0.0002547913,0.00043575172,0.00006799191,0.00035576354],"domain_scores_gemma":[0.99950534,0.00006954051,0.00009910276,0.00023137532,0.00004484607,0.00004977653],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010109611,0.00016378243,0.00026391188,0.0001710909,0.00008822631,0.000015294305,0.00015278644,0.00021367414,0.00017452397],"category_scores_gemma":[0.0003360618,0.00014567492,0.000062122876,0.0002813569,0.00012100843,0.000061660794,0.00012111827,0.00021875836,0.000004957707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045839097,0.000026558137,0.004575998,0.000011819423,0.000006258764,0.000012395926,0.0001323742,0.000013580362,0.9903091,0.001375133,0.0000011671772,0.0034897844],"study_design_scores_gemma":[0.00021882371,0.0000919761,0.00084151333,0.000011437201,0.000017838913,0.000014170297,0.000027554826,0.0006165732,0.9918295,0.006143848,0.000021547992,0.00016519403],"about_ca_topic_score_codex":0.000206943,"about_ca_topic_score_gemma":0.000006718747,"teacher_disagreement_score":0.07439879,"about_ca_system_score_codex":0.0000591824,"about_ca_system_score_gemma":0.00004273302,"threshold_uncertainty_score":0.59404504},"labels":[],"label_agreement":null},{"id":"W2417556444","doi":"10.1007/978-1-4939-1625-2_1","title":"Luminex® Multiplex Bead Suspension Arrays for the Detection and Serotyping of Salmonella spp.","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Luminex (Canada)","funders":"","keywords":"Salmonella; Multiplex; Serotype; Multiplex polymerase chain reaction; Nucleic acid; Biology; Virology; Microbiology; Bacteria; Polymerase chain reaction; Gene; Genetics","score_opus":0.04123227086458791,"score_gpt":0.3450732139674735,"score_spread":0.30384094310288556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417556444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5980093,0.0005500947,0.40053266,0.00039710818,0.00017002088,0.0002721566,0.000002943587,0.000013435009,0.000052268308],"genre_scores_gemma":[0.9009492,0.00008929539,0.0984265,0.00036062291,0.00010545442,0.00004480242,0.000011405121,0.0000018171706,0.000010906129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793285,0.0011727839,0.00029516796,0.00031700535,0.000032333814,0.00024988173],"domain_scores_gemma":[0.9967936,0.0029007737,0.00013232463,0.000092256814,0.000046173824,0.000034867506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021638477,0.00012663346,0.00030392475,0.00001987842,0.00008323863,0.000005848158,0.00016900942,0.00020501803,0.000012922171],"category_scores_gemma":[0.0011433999,0.00004710194,0.00008876368,0.00015894728,0.00016306005,0.000014049298,0.00007816897,0.000113239825,9.597615e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004050103,0.00001017752,0.0073528294,0.0000049718174,0.000007950394,2.0344085e-7,0.000019083054,0.000014954811,0.78828454,0.0004806782,0.000002376386,0.20378175],"study_design_scores_gemma":[0.00057745446,0.0008950626,0.16656417,0.000022572747,0.000042579668,0.000027084481,0.0002552998,0.014258881,0.77588093,0.026907677,0.014254536,0.00031378336],"about_ca_topic_score_codex":0.0003114081,"about_ca_topic_score_gemma":0.00023715822,"teacher_disagreement_score":0.3029399,"about_ca_system_score_codex":0.000008530972,"about_ca_system_score_gemma":0.0000022128802,"threshold_uncertainty_score":0.19207613},"labels":[],"label_agreement":null},{"id":"W2417562492","doi":"10.1007/978-1-4939-3191-0_2","title":"Use of Buffy Coat miRNA Profiling for Breast Cancer Prediction in Healthy Women","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"U.S. Department of Defense","keywords":"Buffy coat; Breast cancer; microRNA; Profiling (computer programming); Oncology; Cancer; Medicine; Internal medicine; Biology; Immunology; Genetics; Computer science; Gene","score_opus":0.05137646339590936,"score_gpt":0.4068402923146525,"score_spread":0.3554638289187432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417562492","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.682986,0.0007940134,0.31521446,0.0001082871,0.0001827354,0.0004949525,0.00019869042,0.000006418777,0.000014406301],"genre_scores_gemma":[0.46810025,0.00009315904,0.5304767,0.00031346356,0.00011346701,0.00055942335,0.00026622752,0.00004081706,0.00003648605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981498,0.0006667609,0.00040111586,0.00039652534,0.00005830211,0.0003275012],"domain_scores_gemma":[0.9992694,0.000044116645,0.0001525659,0.0002877964,0.00015142704,0.00009469406],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011176585,0.00014443562,0.0002605033,0.00014541074,0.000013973037,0.000005656075,0.00012794511,0.0002797067,0.000006699851],"category_scores_gemma":[0.00040386876,0.00014695502,0.00006232703,0.0001799164,0.00009274004,0.000005216159,0.00008117777,0.00008537162,3.3735083e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088765344,0.00008005,0.033929482,0.000054382377,0.000030170984,0.0000012574234,0.00006350468,0.0011594052,0.95690584,0.00018442186,0.00004559469,0.006658225],"study_design_scores_gemma":[0.0022750492,0.0006821086,0.01123291,0.000040745035,0.00001814567,0.000017520471,0.000100692014,0.0026077197,0.9767442,0.0021649695,0.0038584047,0.00025753796],"about_ca_topic_score_codex":0.000121861915,"about_ca_topic_score_gemma":0.00004129224,"teacher_disagreement_score":0.21526225,"about_ca_system_score_codex":0.00014156254,"about_ca_system_score_gemma":0.0002261069,"threshold_uncertainty_score":0.5992652},"labels":[],"label_agreement":null},{"id":"W2417586353","doi":"10.1007/978-1-59745-548-0_7","title":"Proteomic Analysis of Neuroendocrine Peptidergic System Disruption Using the AtT20 Pituitary Cell Line as a Model","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Proteome; Proteomics; Chemistry; Cell culture; Gel electrophoresis; Biochemistry; Biology; Cell biology; Gene","score_opus":0.03644560647333867,"score_gpt":0.39528006787405273,"score_spread":0.35883446140071407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417586353","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43912762,0.00008626832,0.56030846,0.000035968613,0.00000548,0.00016613754,0.000013948556,0.000031046762,0.00022505788],"genre_scores_gemma":[0.43115795,0.00005203058,0.5685401,0.00003582337,0.000009215455,0.00012722914,0.000023116543,0.000014591878,0.000039962095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867225,0.00023791315,0.00044171026,0.00035966808,0.000066377834,0.00022210396],"domain_scores_gemma":[0.99898094,0.00007787197,0.00024599352,0.000610366,0.000051295472,0.000033506625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000254535,0.00016336236,0.00038474155,0.00016384116,0.00008482938,0.000003086189,0.0002941375,0.000087255816,0.000014701313],"category_scores_gemma":[0.00005739171,0.00013143243,0.00019482248,0.00055332616,0.0001466774,0.000019686528,0.00014027856,0.0002621857,6.246023e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018206354,0.00004071845,0.00048659756,0.000039143586,0.00005322408,0.000025197256,0.000035155026,0.09199495,0.90522444,0.001901849,4.5586205e-7,0.00018008394],"study_design_scores_gemma":[0.00011142089,0.000016158796,0.000008534828,0.000008481135,0.00012882033,0.000064277745,0.000022703718,0.37696594,0.62033325,0.0022386033,0.000015131398,0.00008671262],"about_ca_topic_score_codex":0.00013670766,"about_ca_topic_score_gemma":0.000002016992,"teacher_disagreement_score":0.28497097,"about_ca_system_score_codex":0.000073711715,"about_ca_system_score_gemma":0.000040604016,"threshold_uncertainty_score":0.5359659},"labels":[],"label_agreement":null},{"id":"W2417622887","doi":"10.1007/978-1-0716-1307-8_2","title":"Modeling and Predicting RNA Three-Dimensional Structures","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université du Québec à Montréal","funders":"","keywords":"Nucleic acid structure; RNA; Computer science; Computational biology; Representation (politics); Theoretical computer science; Data mining; Bioinformatics; Biology; Genetics","score_opus":0.026046419683999972,"score_gpt":0.32718196797002524,"score_spread":0.3011355482860253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417622887","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008000332,0.026503503,0.9515897,0.00007614791,0.00045071388,0.0003710095,0.000038788257,0.00002050671,0.012949283],"genre_scores_gemma":[0.0040431316,0.0005802015,0.98532706,0.00052892143,0.00033772143,0.00004205428,0.0003029538,0.00014428538,0.008693692],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977425,0.00036479844,0.00046049018,0.0009684411,0.0001155556,0.0003482131],"domain_scores_gemma":[0.99906373,0.00006237853,0.00014476523,0.00054676144,0.00008975167,0.00009259074],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082603353,0.00044912536,0.00056094484,0.00013716491,0.00007264739,0.0000221841,0.000242045,0.0012321101,0.00009770799],"category_scores_gemma":[0.00029307324,0.000440532,0.00018574132,0.000028065466,0.00013168211,0.0000017635676,0.000475845,0.00040006355,0.0000014815743],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003339593,0.000006561813,0.000027025439,0.000031265794,0.00013725551,0.00004670163,0.0000061411574,0.000589263,0.9376711,0.029455574,0.000006797257,0.03198892],"study_design_scores_gemma":[0.0006163599,0.00030781122,0.000007659502,0.00020971835,0.00012315932,0.00018258809,0.000010302664,0.005114533,0.697673,0.28340012,0.011289849,0.0010648959],"about_ca_topic_score_codex":0.000028059343,"about_ca_topic_score_gemma":0.00004628877,"teacher_disagreement_score":0.25394455,"about_ca_system_score_codex":0.000018492608,"about_ca_system_score_gemma":0.00011081046,"threshold_uncertainty_score":0.9998046},"labels":[],"label_agreement":null},{"id":"W2417652622","doi":"10.1007/978-1-62703-336-7_18","title":"Quantification of Intracellular Mitochondrial Displacements in Response to Nanomechanical Forces","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Force Microscopy Techniques and Applications","field":"Physics and Astronomy","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Intracellular; Mitochondrion; Displacement (psychology); Biophysics; Atomic force microscopy; Extracellular; Cell; Fluorescence microscope; Nanotechnology; Chemistry; Materials science; Cell biology; Biology; Physics; Optics; Fluorescence; Biochemistry","score_opus":0.015077382969746457,"score_gpt":0.39175284208946864,"score_spread":0.37667545911972217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417652622","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32541838,0.000014382831,0.67377186,0.00019522321,0.000045589597,0.00044230823,0.0000065050704,0.000006064615,0.00009969398],"genre_scores_gemma":[0.40307295,6.779139e-7,0.5964577,0.000030169162,0.000011403164,0.00034330352,0.000016226279,0.000008016622,0.000059525875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986259,0.0005279154,0.00035940603,0.0002598611,0.00003509412,0.00019183963],"domain_scores_gemma":[0.9994379,0.00012316737,0.00008305415,0.00028757963,0.000031949065,0.000036348978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057578046,0.00009815094,0.00020060698,0.0001521917,0.000016930355,0.00000914854,0.00020269323,0.00007780061,0.00016472286],"category_scores_gemma":[0.00005153654,0.000094384784,0.000050733455,0.0002796111,0.000045688786,0.000022659293,0.00007878696,0.00010577294,0.000013864751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057161196,0.00007460479,0.0011735808,0.0000026215253,0.000005369433,1.4975741e-7,0.00004988819,0.00003922528,0.9529198,0.03867024,0.000020630892,0.006986749],"study_design_scores_gemma":[0.0002627585,0.000105682266,0.00047474078,0.00001407957,0.0000034571187,1.4094829e-7,0.00006432311,0.0007678542,0.96624964,0.029683303,0.0022698883,0.00010411884],"about_ca_topic_score_codex":0.0004551584,"about_ca_topic_score_gemma":0.000003890137,"teacher_disagreement_score":0.07765458,"about_ca_system_score_codex":0.000021727654,"about_ca_system_score_gemma":0.00001944009,"threshold_uncertainty_score":0.38488996},"labels":[],"label_agreement":null},{"id":"W2417671590","doi":"10.1007/978-1-62703-161-5_27","title":"The Caenorhabditis elegans Model of Legionella Infection","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Howard Hughes Medical Institute","keywords":"Caenorhabditis elegans; Biology; Innate immune system; Model organism; Host (biology); Germline; Caenorhabditis; Immune system; Genetic screen; Gene; Genetics; Phenotype","score_opus":0.0232650901955217,"score_gpt":0.35239850836268666,"score_spread":0.32913341816716496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417671590","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30621082,0.0017166474,0.6909464,0.000087682805,0.0003432052,0.00013371585,0.000004968918,0.00000726927,0.0005493189],"genre_scores_gemma":[0.7534953,0.0007024824,0.2451951,0.00022244324,0.0001242275,0.000028691025,0.00002663789,0.00002824811,0.00017687661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823815,0.0006127379,0.00034377663,0.00027734294,0.000074654294,0.00045335578],"domain_scores_gemma":[0.99914956,0.000048624675,0.00013311696,0.00051894406,0.00007626607,0.00007350145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013407767,0.00018212038,0.00021678917,0.00007060978,0.00008789706,0.00000939974,0.0002496562,0.00029533036,0.0000034262598],"category_scores_gemma":[0.000255415,0.00015092902,0.00012572181,0.0001225754,0.00026147318,0.0000033780998,0.00016241606,0.00016841397,0.0000029162734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018618117,0.000060095732,0.015450291,0.0000099121235,0.000037798352,3.6253e-7,0.00016821054,0.001946881,0.97406024,0.003401562,0.000079129975,0.004766923],"study_design_scores_gemma":[0.00031061412,0.00017081005,0.001891778,0.0000046025575,0.000028009696,0.000016206792,0.000031772106,0.0018882253,0.9797014,0.0048457305,0.010881744,0.00022912752],"about_ca_topic_score_codex":0.00012395803,"about_ca_topic_score_gemma":0.00007835477,"teacher_disagreement_score":0.44728446,"about_ca_system_score_codex":0.000018960864,"about_ca_system_score_gemma":0.000053021722,"threshold_uncertainty_score":0.61547065},"labels":[],"label_agreement":null},{"id":"W2417711915","doi":"10.1007/978-1-61779-839-9_14","title":"New Virus Discovery by Deep Sequencing of Small RNAs","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Computational biology; RNA; Deep sequencing; Plant virus; DNA sequencing; Gene; Virus; Genetics; Genome","score_opus":0.0714667080608138,"score_gpt":0.37808878407418794,"score_spread":0.30662207601337416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417711915","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.628606,0.008306472,0.36127385,0.00027050098,0.00018695772,0.00022038702,0.00012656003,0.000026511674,0.0009827693],"genre_scores_gemma":[0.14568363,0.00084722677,0.85203576,0.0005899392,0.00023274499,0.000039312778,0.000119142685,0.0000037135642,0.00044853307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980556,0.0009391668,0.00023174546,0.00021286406,0.00007952772,0.00048114642],"domain_scores_gemma":[0.99911857,0.00062456354,0.00007638356,0.00006559456,0.000020873345,0.00009399624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011231431,0.00012783388,0.0002800488,0.0000244801,0.00004157976,0.0000123215,0.00028106087,0.00012998788,0.00006551774],"category_scores_gemma":[0.00057083694,0.00005071483,0.00007789274,0.0002848713,0.00010057125,0.00006165548,0.00021344997,0.00016002524,0.0000056342988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014719896,0.000022994676,0.0032609925,0.0000034957825,0.000018223463,0.0000025915492,0.00004866129,0.0000018911184,0.92163527,0.0007121203,0.00009033022,0.07418869],"study_design_scores_gemma":[0.000091266586,0.00012949652,0.0028262448,0.000008917616,0.000006637007,0.0000053045014,0.00009396868,0.000021967873,0.98161846,0.0022407863,0.012811306,0.00014566664],"about_ca_topic_score_codex":0.0018140492,"about_ca_topic_score_gemma":0.00028594758,"teacher_disagreement_score":0.4907619,"about_ca_system_score_codex":0.00004274239,"about_ca_system_score_gemma":0.000012235564,"threshold_uncertainty_score":0.27423117},"labels":[],"label_agreement":null},{"id":"W2417713113","doi":"10.1007/978-1-61779-005-8_2","title":"FISH and Immunofluorescence Staining in Chlamydomonas","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Micro and Nano Robotics","field":"Physics and Astronomy","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Chlamydomonas reinhardtii; Chlamydomonas; Staining; Immunofluorescence; Biology; In situ; Fish <Actinopterygii>; Model organism; Cell biology; Fluorescence; In situ hybridization; Fluorescence in situ hybridization; Gene; Genetics; Gene expression; Chemistry; Antibody; Fishery; Optics","score_opus":0.026602088353880834,"score_gpt":0.35446245921500186,"score_spread":0.327860370861121,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417713113","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22667885,0.00025174904,0.7687825,0.00003114479,0.00008594993,0.00010782562,0.0000035175215,0.0000070904302,0.004051378],"genre_scores_gemma":[0.29789343,0.000012699163,0.70189136,0.00012709797,0.000014842466,0.0000133048125,0.0000060954326,0.000009944748,0.000031198764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989519,0.00039778426,0.00018917743,0.0002111541,0.000018266117,0.0002316922],"domain_scores_gemma":[0.99969655,0.00006824272,0.00004356421,0.00015305527,0.0000126454715,0.000025951438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005437226,0.000099161654,0.00018601841,0.00009419883,0.000017673628,0.0000051997736,0.000120065495,0.00006394823,0.000094411385],"category_scores_gemma":[0.000025739497,0.00009529616,0.000028913015,0.00013634196,0.000081680504,0.00001914743,0.000100329176,0.00016850387,0.0000016591483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029732686,0.00008513654,0.2974884,0.000007700678,0.000023663899,0.000020648533,0.0011914789,0.000008416277,0.55168456,0.046015967,0.000008885049,0.103435405],"study_design_scores_gemma":[0.0018114422,0.0002094348,0.051899374,0.00006399414,0.000020034595,0.0000057595244,0.00062799355,0.0007054661,0.79400307,0.14737847,0.0026692406,0.00060570415],"about_ca_topic_score_codex":0.00044601638,"about_ca_topic_score_gemma":0.000011463754,"teacher_disagreement_score":0.24558903,"about_ca_system_score_codex":0.000009750901,"about_ca_system_score_gemma":0.000018891238,"threshold_uncertainty_score":0.38860646},"labels":[],"label_agreement":null},{"id":"W2417742087","doi":"10.1007/978-1-60761-646-7_18","title":"Reporter Gene-Based Recombination Lines for Studies of Genome Stability","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Homologous recombination; FLP-FRT recombination; Recombination; Biology; Genetics; Chromatin; Gene; Non-allelic homologous recombination; Gene targeting; Locus (genetics); Epigenetics; Ectopic recombination; Genetic recombination; Reporter gene; Genome; Gene expression","score_opus":0.05375437448748718,"score_gpt":0.41279303724436167,"score_spread":0.35903866275687446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417742087","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5119185,0.0011147042,0.48612103,0.00018557026,0.00033269433,0.0002675133,0.000020036936,0.000005110935,0.000034842888],"genre_scores_gemma":[0.2381764,0.00006208383,0.7607623,0.00015261506,0.00011958578,0.0001207918,0.0005242151,0.000014231901,0.000067794565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881625,0.00030019844,0.00035218245,0.0003474721,0.00003471031,0.00014919874],"domain_scores_gemma":[0.9991958,0.00006363346,0.00015787194,0.0003238106,0.00023411306,0.000024730349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012522228,0.000121856225,0.00023784589,0.000060414648,0.000032035186,0.000003453804,0.00012107463,0.00027264628,0.0000047039334],"category_scores_gemma":[0.0011839414,0.00010013679,0.000095810065,0.00007450285,0.00014088911,0.0000017272214,0.000038717615,0.000075999254,1.8028072e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004901313,0.000054570985,0.0011183191,0.000032741264,0.00004287228,0.0000012559975,0.00003284144,0.00005001125,0.9953144,0.00026918424,0.000026211868,0.0030085468],"study_design_scores_gemma":[0.00038640495,0.00023666493,0.0002650465,0.0000029602963,0.000018462324,0.0000076075053,0.000016868198,0.00012274804,0.9867171,0.0014245714,0.010684607,0.000116976145],"about_ca_topic_score_codex":0.000015239968,"about_ca_topic_score_gemma":0.00028654217,"teacher_disagreement_score":0.27464125,"about_ca_system_score_codex":0.000009112054,"about_ca_system_score_gemma":0.00007459638,"threshold_uncertainty_score":0.408346},"labels":[],"label_agreement":null},{"id":"W2417879653","doi":"10.1007/978-1-61779-325-7_4","title":"Utilization of Feline ELISPOT for Mapping Vaccine Epitopes","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases","keywords":"ELISPOT; Feline immunodeficiency virus; Virology; Epitope; Biology; Immunology; Immunity; Vaccination; HIV vaccine; Virus; Immune system; Lentivirus; Antibody; T cell; Vaccine trial; Viral disease","score_opus":0.10098150899991801,"score_gpt":0.4270036918135098,"score_spread":0.32602218281359174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417879653","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.039661165,0.0043903245,0.954595,0.00007531379,0.00020570632,0.00041448514,0.00004519656,0.00001742916,0.0005953414],"genre_scores_gemma":[0.14946641,0.00020356424,0.8494851,0.000087713095,0.000012305463,0.00014493373,0.00034134113,0.000016371156,0.00024225687],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982677,0.0008670389,0.00031535144,0.00024295985,0.000010775651,0.0002961396],"domain_scores_gemma":[0.9993772,0.00022101385,0.0000855575,0.00021920845,0.000081550206,0.00001545027],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009187488,0.00011241026,0.00030277102,0.00020875293,0.000032926037,0.0000011212021,0.00016004164,0.0002129758,0.0002507896],"category_scores_gemma":[0.0005403724,0.000091727925,0.00007937634,0.00016384953,0.00008498776,0.000014153748,0.00006590662,0.000106631385,0.000023035283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017339742,0.00014072855,0.0065255696,0.000020103173,0.00011263946,0.0000039243164,0.00021333953,0.0000010356996,0.8771368,0.004235951,0.000054083426,0.111382425],"study_design_scores_gemma":[0.0016793982,0.000471937,0.0042554834,0.000014726984,0.000018059683,0.000008967614,0.00007753158,0.000015395126,0.971777,0.0063233147,0.01526371,0.0000944305],"about_ca_topic_score_codex":0.000113917245,"about_ca_topic_score_gemma":0.000017955716,"teacher_disagreement_score":0.11128799,"about_ca_system_score_codex":0.000017482982,"about_ca_system_score_gemma":0.00003213689,"threshold_uncertainty_score":0.37405562},"labels":[],"label_agreement":null},{"id":"W2417940680","doi":"10.1007/978-1-62703-134-9_32","title":"Microchip UV Absorbance Detection Applied to Isoelectric Focusing of Proteins","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"University of Waterloo","funders":"","keywords":"Isoelectric focusing; Polydimethylsiloxane; Chromatography; Absorbance; Materials science; Nanotechnology; Chemistry","score_opus":0.010004290646321625,"score_gpt":0.29741873396681084,"score_spread":0.2874144433204892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417940680","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17884831,0.013616132,0.8063962,0.0000099003955,0.000061642815,0.00032595234,0.000001313495,0.000044981178,0.0006955869],"genre_scores_gemma":[0.62958187,0.00086693215,0.3691798,0.00007335868,0.000048066144,0.0002080351,0.0000034145107,0.000030022178,0.00000851323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99905914,0.00014242364,0.00024604212,0.0001616006,0.00003576938,0.0003550261],"domain_scores_gemma":[0.9996185,0.000043555814,0.00003449107,0.00023173587,0.000018316949,0.000053403477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047646198,0.00012615087,0.00021410026,0.00020863803,0.000024628192,0.0000029938155,0.0001314724,0.00013673965,0.000011416618],"category_scores_gemma":[0.000038538343,0.00013254838,0.00004283564,0.00058844103,0.000026998938,0.000013689337,0.000027186476,0.0001487757,0.0000097823895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008209493,0.000017909848,0.00007304994,0.000018926608,0.000014018087,1.5669659e-7,0.00007531152,0.00003424323,0.9541759,0.0016793183,0.000044168817,0.04385877],"study_design_scores_gemma":[0.0000956472,0.00003641878,0.00035477598,0.000004392089,0.0000086799,0.0000050058807,0.000008161331,0.000051375893,0.9905743,0.0011950592,0.0075345705,0.00013162587],"about_ca_topic_score_codex":0.000012166209,"about_ca_topic_score_gemma":0.0000013248526,"teacher_disagreement_score":0.45073354,"about_ca_system_score_codex":0.00006305426,"about_ca_system_score_gemma":0.0000111481995,"threshold_uncertainty_score":0.54051656},"labels":[],"label_agreement":null},{"id":"W2417947159","doi":"10.1007/978-1-61779-851-1_4","title":"Live Imaging of the Developing Mouse Mesonephros","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Mesonephros; Embryo; Morphogenesis; Live cell imaging; Embryonic stem cell; Cell biology; Rendering (computer graphics); Biology; Process (computing); Computer science; Artificial intelligence; Cell; Genetics","score_opus":0.026187486872058508,"score_gpt":0.3881664912761781,"score_spread":0.36197900440411956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417947159","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43250132,0.0033204283,0.5626694,0.00025231263,0.00023240269,0.000276319,0.000006940478,0.00000685092,0.000734021],"genre_scores_gemma":[0.46064404,0.00013279614,0.5382644,0.00054061663,0.00007294503,0.000042339343,0.000015282047,0.000031856474,0.00025571277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99736565,0.0014557833,0.0002890511,0.00028601522,0.00009855711,0.00050495524],"domain_scores_gemma":[0.9991822,0.00006132564,0.0001062265,0.000523023,0.00006942964,0.00005778017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015801009,0.00015437759,0.00020635065,0.000084598665,0.000045211767,0.0000053448284,0.0004736791,0.00016494944,0.000015125633],"category_scores_gemma":[0.00058282673,0.00011798411,0.000120260636,0.00020611979,0.00023174015,0.0000032215503,0.0006002823,0.0001782416,0.000005662153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015779831,0.000031208107,0.056334566,0.000016404583,0.000027136317,0.0000010805279,0.000063491585,0.000012661934,0.9395414,0.00078693416,0.00004083482,0.0031284778],"study_design_scores_gemma":[0.00025172965,0.000026204614,0.00489221,0.000011378991,0.0000072705916,0.000016926464,0.000061672334,0.000047953108,0.98656756,0.00034505114,0.007626393,0.00014567297],"about_ca_topic_score_codex":0.00003916019,"about_ca_topic_score_gemma":0.000006773826,"teacher_disagreement_score":0.05144236,"about_ca_system_score_codex":0.000033006803,"about_ca_system_score_gemma":0.00008412456,"threshold_uncertainty_score":0.48112524},"labels":[],"label_agreement":null},{"id":"W2417988862","doi":"10.1007/978-1-4939-1258-2_9","title":"Quantitative Metabolomic Profiling Using Dansylation Isotope Labeling and Liquid Chromatography Mass Spectrometry","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Metabolomics; Chemistry; Metabolite; Chromatography; Dansyl chloride; Metabolome; Mass spectrometry; Analyte; Derivatization; Amine gas treating; Biochemistry; Organic chemistry","score_opus":0.02231934107741728,"score_gpt":0.36431325189773484,"score_spread":0.34199391082031755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417988862","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45555848,0.004647898,0.5391515,0.00003674313,0.00014332046,0.00016882272,0.0000056427775,0.00001123168,0.00027638534],"genre_scores_gemma":[0.17263499,0.00064581615,0.82636386,0.00017463874,0.0000729,0.000025715317,0.00003723928,0.000035184625,0.00000964695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970795,0.001182388,0.0004475216,0.00074384146,0.0000811959,0.00046555832],"domain_scores_gemma":[0.9991676,0.00011009088,0.00019470055,0.00037388864,0.00008048332,0.00007321989],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019997589,0.00030682888,0.0005361531,0.00043082537,0.000111493406,0.000025092872,0.00020071288,0.00027172928,0.0000070976093],"category_scores_gemma":[0.00080971746,0.00029531127,0.00012716296,0.0004994541,0.00021751692,0.000006887086,0.00020524932,0.00021507853,0.0000010643919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012309571,0.000024992562,0.0040087183,0.000023204835,0.00013180816,0.0000018321422,0.000026045069,0.00009848551,0.97320837,0.021690197,0.0000014062596,0.0006618616],"study_design_scores_gemma":[0.0006449351,0.0007623327,0.0004784004,0.000013044019,0.00006350946,0.000015058658,0.00010885074,0.0030249993,0.986387,0.007023984,0.001102349,0.00037550926],"about_ca_topic_score_codex":0.000029829454,"about_ca_topic_score_gemma":0.000008368987,"teacher_disagreement_score":0.2872124,"about_ca_system_score_codex":0.000019414185,"about_ca_system_score_gemma":0.000031865107,"threshold_uncertainty_score":0.9999499},"labels":[],"label_agreement":null},{"id":"W2417996578","doi":"10.1007/978-1-61779-185-7_19","title":"Using Molecular Tracers to Assess the Integrity of the Intestinal Epithelial Barrier In Vivo","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research","keywords":"In vivo; Structural integrity; Intestinal epithelium; Epithelium; Biology; Pathology; Chemistry; Medicine; Engineering; Biotechnology","score_opus":0.1760237032396337,"score_gpt":0.42809273254529917,"score_spread":0.25206902930566544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2417996578","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3714646,0.00005508976,0.625936,0.00015155331,0.0006020289,0.00024649934,0.000008427858,0.000009150642,0.0015266562],"genre_scores_gemma":[0.69335675,0.0000036423994,0.30491778,0.0016504914,0.000016922191,0.000027171936,7.55031e-8,0.000013571278,0.000013559057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957827,0.0030388797,0.00036224214,0.00040317434,0.00011313269,0.00029987688],"domain_scores_gemma":[0.998939,0.00040813582,0.00011676949,0.00044446663,0.000049159764,0.000042520085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013366173,0.00017452872,0.00029489433,0.00014570562,0.000079554484,0.000007931074,0.0005749638,0.00013339412,0.000054802254],"category_scores_gemma":[0.0040646004,0.000101216545,0.00011409239,0.000757462,0.00051026617,0.00002619552,0.00032817185,0.00053441146,9.0783266e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004968999,0.000017639977,0.006401924,0.0000043305554,0.000006678085,0.0000145852555,0.0008338497,0.000056736677,0.97954226,0.0108027095,0.0000029522378,0.0022666622],"study_design_scores_gemma":[0.00017764406,0.00007183539,0.0023563087,0.000016236647,0.000014278735,0.000031722793,0.00022523175,0.00021240565,0.978578,0.017662518,0.0005380698,0.00011575323],"about_ca_topic_score_codex":0.00025046305,"about_ca_topic_score_gemma":0.00005083139,"teacher_disagreement_score":0.32189217,"about_ca_system_score_codex":0.000040931445,"about_ca_system_score_gemma":0.000069003254,"threshold_uncertainty_score":0.48659998},"labels":[],"label_agreement":null},{"id":"W2418013651","doi":"10.1007/978-1-60327-815-7_21","title":"The Use of 2-Aminopurine Fluorescence to Study DNA Polymerase Function","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"DNA polymerase; DNA clamp; DNA polymerase II; Polymerase; DNA replication; DNA; Biophysics; Chemistry; Base pair; DNA polymerase I; Fluorescence; Molecular biology; Biology; Biochemistry; Polymerase chain reaction; Reverse transcriptase; Gene; Physics","score_opus":0.023494971953661313,"score_gpt":0.3548951232831011,"score_spread":0.3314001513294398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418013651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8285131,0.0003929103,0.17040005,0.00020623964,0.00012715512,0.00024960734,0.0000042171946,0.000008400507,0.000098323595],"genre_scores_gemma":[0.8177503,0.000049636106,0.18119314,0.0007019374,0.000061952276,0.000027768281,0.000021112546,0.000016150223,0.00017799764],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983802,0.0005206801,0.00033078008,0.00040663136,0.00007597984,0.0002857648],"domain_scores_gemma":[0.99908274,0.00005832417,0.0000884248,0.0006386214,0.000060318474,0.00007157941],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005602111,0.00016996366,0.00020272065,0.00005165213,0.000059817354,0.000012835187,0.00031244528,0.00015615983,0.0000073326614],"category_scores_gemma":[0.00055381504,0.00013159226,0.00007898346,0.00020506953,0.00009541575,0.0000023089842,0.00014198488,0.00011708733,0.0000016303816],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022850127,0.00016426134,0.0021581782,0.0000019680203,0.00003175676,0.0000066505645,0.00002472308,0.000016933505,0.90995944,0.00011631217,0.00007210993,0.08721915],"study_design_scores_gemma":[0.00041409553,0.0011961014,0.0057093184,0.000004317766,0.000018560908,0.000006868437,0.00005357346,0.000020999189,0.98388135,0.00034990208,0.008194636,0.00015027948],"about_ca_topic_score_codex":0.000017559712,"about_ca_topic_score_gemma":0.000005742278,"teacher_disagreement_score":0.08706887,"about_ca_system_score_codex":0.000010060101,"about_ca_system_score_gemma":0.000025740293,"threshold_uncertainty_score":0.53661764},"labels":[],"label_agreement":null},{"id":"W2418089650","doi":"10.1007/7651_2015_274","title":"The piggyBac Transposon as a Platform Technology for Somatic Cell Reprogramming Studies in Mouse","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research; Cabinet Office, Government of Japan","keywords":"Reprogramming; Induced pluripotent stem cell; Somatic cell; Biology; Regenerative medicine; Cell biology; Transposable element; Stem cell; Computational biology; Transgene; Genetics; Embryonic stem cell; Genome; Gene","score_opus":0.07959116687708057,"score_gpt":0.45291452437733654,"score_spread":0.37332335750025597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418089650","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68053603,0.01973625,0.29669625,0.0007955707,0.00027556863,0.0014589084,0.000008492154,0.00003554281,0.0004574032],"genre_scores_gemma":[0.22275272,0.0016867458,0.7722599,0.00023650166,0.000081821134,0.0015468403,0.00007129237,0.00009192446,0.0012722505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972752,0.00069773913,0.000509286,0.00065815565,0.00011351645,0.0007461464],"domain_scores_gemma":[0.99870366,0.00025276982,0.000116219344,0.0006885047,0.00015404614,0.00008479922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036188914,0.00024922797,0.00039367765,0.00026615945,0.00008618338,0.000017501548,0.00060323556,0.00046232913,8.5636356e-7],"category_scores_gemma":[0.002180497,0.0001916304,0.00012375037,0.0004032176,0.0004470656,0.0000038737207,0.00026614388,0.00029205633,0.000005103245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023164305,0.00008419591,0.0014699383,0.00006569668,0.00006235604,0.000026335145,0.00018817614,0.00008746818,0.9772234,0.00075013575,0.000031456268,0.019779174],"study_design_scores_gemma":[0.0016121009,0.0009466708,0.000009730384,0.000020263582,0.000012144897,0.000028094637,0.0014454585,0.00026554245,0.9594663,0.017623642,0.018328425,0.00024166021],"about_ca_topic_score_codex":0.000031044907,"about_ca_topic_score_gemma":0.0001294697,"teacher_disagreement_score":0.47556365,"about_ca_system_score_codex":0.000084863,"about_ca_system_score_gemma":0.00015029131,"threshold_uncertainty_score":0.7814461},"labels":[],"label_agreement":null},{"id":"W2418094818","doi":"10.1007/978-1-4939-3046-3_13","title":"Visualizing the Behavior of HIV-Infected T Cells In Vivo Using Multiphoton Intravital Microscopy","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Institute on Drug Abuse","keywords":"Intravital microscopy; Multiphoton fluorescence microscope; Context (archaeology); In vivo; Immune system; Human immunodeficiency virus (HIV); Biology; Neuroscience; Cell biology; Immunology; Fluorescence microscope; Physics; Optics","score_opus":0.04446659933203076,"score_gpt":0.43647183533565026,"score_spread":0.3920052360036195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418094818","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91347253,0.0013489622,0.08404288,0.000020519969,0.00029379298,0.000603334,0.00009502913,0.000013094942,0.00010985478],"genre_scores_gemma":[0.7717523,0.000030674008,0.22778234,0.000067029825,0.000009255974,0.00015574407,0.00009340946,0.00002652013,0.00008274398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995872,0.0029170685,0.00037425972,0.00030284355,0.000028099132,0.0005056798],"domain_scores_gemma":[0.9992163,0.0002904865,0.00009957455,0.0003010556,0.000060693656,0.000031873977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014346131,0.00017279878,0.00037398783,0.0002429596,0.000040040253,0.0000057109687,0.00024261275,0.00030201513,0.000086530665],"category_scores_gemma":[0.0002971165,0.00012565264,0.00007821797,0.0003041215,0.00034247563,0.000020601688,0.00017362493,0.00034463522,0.000035508354],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111894355,0.0003164807,0.028278206,0.000005911977,0.00004581414,0.000049770853,0.00047709607,0.000017436212,0.9688096,0.00012982648,0.000022389077,0.0017355471],"study_design_scores_gemma":[0.0021777744,0.00022961797,0.0007683493,0.000017306087,0.000024448927,0.000031599484,0.000292867,0.000051541538,0.9941,0.00013973369,0.002049831,0.00011694082],"about_ca_topic_score_codex":0.00072760094,"about_ca_topic_score_gemma":0.00009037485,"teacher_disagreement_score":0.14373946,"about_ca_system_score_codex":0.00010769827,"about_ca_system_score_gemma":0.00011831233,"threshold_uncertainty_score":0.5123966},"labels":[],"label_agreement":null},{"id":"W2418196670","doi":"10.1007/978-1-4939-1280-3_15","title":"Quantum Dots for Imaging Neural Cells In Vitro and In Vivo","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Quantum Dots Synthesis And Properties","field":"Materials Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Microglia; In vivo; Neuroscience; In vitro; Quantum dot; Chemistry; Medicine; Biology; Nanotechnology; Materials science; Immunology; Inflammation; Biochemistry","score_opus":0.02560700195453888,"score_gpt":0.3484603988594746,"score_spread":0.32285339690493575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418196670","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78292507,0.000806284,0.21538986,0.000279347,0.00029444913,0.00019038942,0.0000066323128,0.000012097999,0.000095869626],"genre_scores_gemma":[0.6535147,0.000018932802,0.34601733,0.0003534188,0.000018657332,0.00005497977,8.5481884e-7,0.000013218125,0.000007939113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973126,0.0016131178,0.0003098502,0.00036984953,0.000036716763,0.00035783107],"domain_scores_gemma":[0.9992103,0.00050271826,0.000059347592,0.00018342806,0.000013874384,0.000030360132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030782253,0.00013150983,0.00033092432,0.00017400245,0.000024941992,0.000025858251,0.00017473908,0.00008456913,0.00002451103],"category_scores_gemma":[0.00052149064,0.00010689658,0.000033708395,0.00009826072,0.00013841379,0.00004157563,0.0000891437,0.00009357526,0.000002055803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009866054,0.000017806666,0.00080395566,0.000022377726,7.1701663e-7,0.0000048652037,0.00010675452,0.00004092455,0.98374575,0.0009882799,0.000003802039,0.0141661065],"study_design_scores_gemma":[0.0003547026,0.00004431899,0.00023432578,0.000014793531,0.0000024297835,0.0000040162954,0.000036389072,0.03250854,0.9532035,0.011962457,0.0014963483,0.00013815591],"about_ca_topic_score_codex":0.00021470613,"about_ca_topic_score_gemma":0.00003305381,"teacher_disagreement_score":0.13062748,"about_ca_system_score_codex":0.000019578625,"about_ca_system_score_gemma":0.000012132034,"threshold_uncertainty_score":0.4359116},"labels":[],"label_agreement":null},{"id":"W2418205348","doi":"10.1007/978-1-61779-270-0_7","title":"Affinity-Based Assays for the Identification and Quantitative Evaluation of Noncovalent Poly(ADP-Ribose)-Binding Proteins","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Effector; Poly ADP ribose polymerase; Cell biology; Cell signaling; Computational biology; Chemistry; Signal transduction; Immunoprecipitation; Ribose; Protein–protein interaction; Biology; Polymerase; Biochemistry; DNA; Enzyme","score_opus":0.22733936039812433,"score_gpt":0.512155520309216,"score_spread":0.28481615991109166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418205348","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060364895,0.0012292375,0.93573076,0.0005307221,0.00018659647,0.0017018429,0.000022451211,0.000011984618,0.00022149594],"genre_scores_gemma":[0.20031473,0.000025546135,0.7986006,0.00018232051,0.000023770546,0.0007996935,0.000029223504,0.000015011969,0.000009109203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974639,0.0015851475,0.00039433988,0.0002608556,0.00014685893,0.00014890982],"domain_scores_gemma":[0.9984895,0.0006321353,0.0002654975,0.00028535764,0.00029994885,0.000027586451],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007883258,0.00010550169,0.0002389843,0.00018723201,0.000051080577,0.0000040885443,0.000087005756,0.00012093007,0.000041036597],"category_scores_gemma":[0.0015797709,0.00008064119,0.000072656025,0.00021373297,0.00021744767,0.00002174003,0.00001870528,0.00012351564,0.0000010764169],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032581296,0.00009011154,0.0012984392,0.000052159194,0.00006536542,6.8341035e-7,0.00057516334,0.000019371219,0.9677104,0.006995539,0.0000056401077,0.022861337],"study_design_scores_gemma":[0.0022725482,0.00049599237,0.0036686882,0.00006343488,0.00016138049,0.0000039865445,0.00022663857,0.0072052684,0.9716258,0.013986623,0.00020461548,0.00008503953],"about_ca_topic_score_codex":0.000042699743,"about_ca_topic_score_gemma":0.000007792254,"teacher_disagreement_score":0.13994983,"about_ca_system_score_codex":0.00009114901,"about_ca_system_score_gemma":0.00015099275,"threshold_uncertainty_score":0.32884526},"labels":[],"label_agreement":null},{"id":"W2418225665","doi":"10.1007/978-1-61779-418-6_5","title":"Biomarker Discovery in Serum/Plasma Using Surface Enhanced Laser Desorption Ionization Time of Flight (SELDI–TOF) Mass Spectrometry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal General Hospital; McGill University Health Centre","funders":"","keywords":"Surface-enhanced laser desorption/ionization; Proteome; Mass spectrometry; Biomarker discovery; Blood proteins; Chemistry; Biomarker; Proteomics; Fractionation; Chromatography; Albumin; Tandem mass spectrometry; Biochemistry; Protein mass spectrometry","score_opus":0.02648416245216242,"score_gpt":0.34253105455740124,"score_spread":0.31604689210523884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418225665","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47578755,0.000062443905,0.5207689,0.000011168214,0.000020430303,0.00009433946,0.0000138005835,0.000031368418,0.003209999],"genre_scores_gemma":[0.46079046,0.000036813315,0.5389859,0.000012308904,0.000007590711,0.00001423869,0.00002801612,0.000019806821,0.00010483965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825954,0.00034995144,0.0005173501,0.0004604398,0.000085732914,0.00032698462],"domain_scores_gemma":[0.9990919,0.00011782287,0.00023440669,0.00046788334,0.000048760558,0.000039232204],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000687177,0.00020878487,0.00037674772,0.0003145937,0.000027158138,0.000010777503,0.00026613186,0.00035326008,0.0014673873],"category_scores_gemma":[0.00013637579,0.00021248321,0.000092589784,0.0010875148,0.00010603456,0.00007872691,0.00009486416,0.0002206392,0.0000051173492],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004001308,0.00012284733,0.0063126865,0.0000375987,0.00002414286,0.0000051872685,0.00005287272,0.00006753973,0.98923886,0.0030903928,0.0000016015003,0.0010062322],"study_design_scores_gemma":[0.00031083764,0.0000345294,0.000800267,0.00004314429,0.000018071729,0.0000057132766,0.0000293554,0.004428388,0.9789145,0.015172641,0.00003179691,0.00021077496],"about_ca_topic_score_codex":0.00009695278,"about_ca_topic_score_gemma":0.0000085167985,"teacher_disagreement_score":0.018217044,"about_ca_system_score_codex":0.00015192696,"about_ca_system_score_gemma":0.000035155186,"threshold_uncertainty_score":0.9994454},"labels":[],"label_agreement":null},{"id":"W2418249113","doi":"10.1007/978-1-60327-009-0_2","title":"Differential Gene Expression in the Uterus and Blastocyst During the Reactivation of Embryo Development in a Model of Delayed Implantation","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"","keywords":"Blastocyst; Embryo; Suppression subtractive hybridization; Biology; Endometrium; Andrology; Mink; Uterus; Embryogenesis; Transcriptome; Gene expression; Gene; Gene expression profiling; Cell biology; Genetics; Endocrinology; Medicine; cDNA library","score_opus":0.019146354220701812,"score_gpt":0.3261339708043183,"score_spread":0.30698761658361645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418249113","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7805178,0.000881084,0.21821626,0.000029146262,0.000049851104,0.0002664539,0.0000026756798,0.000002158638,0.000034533816],"genre_scores_gemma":[0.9619997,0.0000329619,0.037883718,0.000016229347,0.0000035645216,0.000034441488,0.000016896098,0.0000033094186,0.000009170797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782157,0.0014175392,0.0003896442,0.00021540702,0.000019857902,0.00013595575],"domain_scores_gemma":[0.9994899,0.0001297178,0.00015925082,0.00019538817,0.000022389828,0.0000033201788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008094809,0.00009297532,0.00022530467,0.00014616566,0.000028207654,0.0000016358312,0.00013115162,0.00014869396,0.0000027881147],"category_scores_gemma":[0.0000904026,0.00005624598,0.000023493321,0.00012104387,0.00007158175,0.000020754447,0.00003888039,0.00014903731,1.9678608e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001702709,0.00005485014,0.0031382705,0.00001582302,0.000012224588,0.0000013984434,0.0026907527,0.0001631657,0.9866559,0.00032952474,2.811428e-7,0.006767518],"study_design_scores_gemma":[0.0006691895,0.00006673699,0.10801461,0.000051033552,0.0000041199532,0.000022789827,0.000121481804,0.00003503891,0.8891749,0.0017838933,0.000003266682,0.00005294707],"about_ca_topic_score_codex":0.00004291075,"about_ca_topic_score_gemma":0.000018108778,"teacher_disagreement_score":0.18148187,"about_ca_system_score_codex":0.000018261802,"about_ca_system_score_gemma":0.000022288677,"threshold_uncertainty_score":0.22936444},"labels":[],"label_agreement":null},{"id":"W2418298802","doi":"10.1007/978-1-4939-3393-8_11","title":"Laser Capture Microdissection: Avoiding Bias in Analysis by Selecting Just What Matters","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Laser capture microdissection; Microdissection; Homogeneous; Identification (biology); Population; Biology; Computational biology; Plant tissue; Biological system; Computer science; Genetics; Gene; Botany; Gene expression; Mathematics","score_opus":0.023606040923008016,"score_gpt":0.3839637700744522,"score_spread":0.3603577291514442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418298802","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22851695,0.0013453875,0.76805466,0.0015913983,0.00009097031,0.00023686998,0.000016265158,0.000026633881,0.0001208509],"genre_scores_gemma":[0.636016,0.0011869296,0.3572457,0.0041896594,0.000075979624,0.00035842406,0.0003509925,0.0000701948,0.00050608633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99655944,0.0015020268,0.00047251035,0.00089560304,0.000058812802,0.0005116092],"domain_scores_gemma":[0.9990116,0.00011480839,0.00016021806,0.0005773542,0.000058305883,0.00007772629],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014923502,0.0002928142,0.00039949745,0.00036660203,0.00007954989,0.000031638643,0.00034863086,0.0005787252,0.00004509707],"category_scores_gemma":[0.00025348563,0.00023688935,0.000223196,0.0008936846,0.00016448188,0.000008958187,0.00017456521,0.00027495302,0.0000046255127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020253,0.000050863928,0.010878656,0.0000046824875,0.00013109183,0.0000075426074,0.000026995403,0.00002147839,0.97698444,0.00014950741,0.0004013981,0.011323086],"study_design_scores_gemma":[0.00044023435,0.00009049157,0.0004077888,0.000025631865,0.00006696322,0.000022455151,0.00014893721,0.000050938568,0.9812816,0.00048600687,0.016623268,0.00035570745],"about_ca_topic_score_codex":0.000117023956,"about_ca_topic_score_gemma":0.00019699369,"teacher_disagreement_score":0.41080898,"about_ca_system_score_codex":0.000062791194,"about_ca_system_score_gemma":0.000035777186,"threshold_uncertainty_score":0.9660067},"labels":[],"label_agreement":null},{"id":"W2418313803","doi":"10.1007/978-1-61779-376-9_4","title":"Probing Endogenous RNA Polymerase II Pre-initiation Complexes by Electrophoretic Mobility Shift Assay","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Transcription factor II A; Promoter; RNA polymerase II; Electrophoretic mobility shift assay; Transcription factor II D; Molecular biology; Biology; Transcription (linguistics); Transcription preinitiation complex; Transcription factor II B; Endogeny; RNA polymerase III; DNA; RNA polymerase; Cell biology; RNA; Transcription factor; Gene; Genetics; Gene expression; Biochemistry","score_opus":0.03465367032110696,"score_gpt":0.34103314206213675,"score_spread":0.3063794717410298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418313803","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41804695,0.0032297352,0.57650465,0.000050566596,0.00009880313,0.00034939926,0.000028920362,0.000018518382,0.0016724814],"genre_scores_gemma":[0.8560632,0.00016607008,0.14284696,0.00032476828,0.000041677344,0.00024014295,0.00022592164,0.00003191051,0.000059358914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970841,0.0013232577,0.00041063633,0.0006574177,0.000071593095,0.00045299245],"domain_scores_gemma":[0.99905324,0.000034283246,0.00015246538,0.0006152463,0.00006348687,0.00008128423],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010664009,0.00024230393,0.00027123615,0.00009120903,0.00014543453,0.000011923316,0.0003381172,0.00030400124,0.00009085651],"category_scores_gemma":[0.0002038024,0.00023814343,0.000117128795,0.00019196812,0.0002294695,0.0000045144,0.0001505915,0.00019715629,0.0000027716467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089922636,0.00021787941,0.0007349834,0.000010618237,0.000043346197,0.0000038125595,0.00024766102,0.000007918595,0.9891953,0.0017329896,0.000038603812,0.007677],"study_design_scores_gemma":[0.00040755665,0.00055714796,0.00062378077,0.000005660144,0.00002298859,0.000015737909,0.000027602113,0.00006669161,0.99220264,0.0038921353,0.0019054358,0.00027262152],"about_ca_topic_score_codex":0.00023173742,"about_ca_topic_score_gemma":0.000024446055,"teacher_disagreement_score":0.43801624,"about_ca_system_score_codex":0.000047915582,"about_ca_system_score_gemma":0.00009771394,"threshold_uncertainty_score":0.9711207},"labels":[],"label_agreement":null},{"id":"W2418343708","doi":"10.1007/978-1-60327-009-0_6","title":"Gestation-Induced Uterine Vascular Remodeling","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Endocrinology; Fetus; Internal medicine; Gestation; Pregnancy; Intrauterine growth restriction; Hormone; Uterus; Muscle hypertrophy; Renin–angiotensin system; Medicine; Biology; Blood pressure; Physiology","score_opus":0.049588876380032794,"score_gpt":0.4344729917703996,"score_spread":0.3848841153903668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418343708","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06799185,0.0030199657,0.92313623,0.001630112,0.00013457809,0.00024771207,9.874612e-7,0.00005645097,0.0037820993],"genre_scores_gemma":[0.12309473,0.00026590127,0.8742854,0.0022305867,0.00004006026,0.000017419645,0.000012260488,0.000010571381,0.000043044973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986255,0.00047345762,0.0002713188,0.0003068867,0.0000628028,0.0002600226],"domain_scores_gemma":[0.9994304,0.00009515463,0.000046471505,0.00033886812,0.000040590483,0.000048488746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008014205,0.00014135981,0.00036359733,0.0001415594,0.000036534515,0.0000040770756,0.00008907951,0.0001561883,0.000020940295],"category_scores_gemma":[0.0004193856,0.00012391187,0.000104034305,0.00020674888,0.000036309928,0.00001976497,0.000039557955,0.0002277203,0.0000044187686],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003992804,0.00004727722,0.0009851475,0.000020428117,0.00004339088,0.00006359056,0.00025934487,0.00003586238,0.81798077,0.0032884676,0.000004695052,0.1772311],"study_design_scores_gemma":[0.006810115,0.0025118599,0.057499737,0.000592665,0.0002820123,0.00029332133,0.00018632971,0.0086546,0.711457,0.17639707,0.03420577,0.0011095307],"about_ca_topic_score_codex":0.000017513628,"about_ca_topic_score_gemma":0.0000016713448,"teacher_disagreement_score":0.17612158,"about_ca_system_score_codex":0.00003018285,"about_ca_system_score_gemma":0.000029996976,"threshold_uncertainty_score":0.50529796},"labels":[],"label_agreement":null},{"id":"W2418443730","doi":"10.1007/978-1-60327-414-2_9","title":"Modeling and Analysis of ChIP-Chip Experiments","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chip; Computer science; Embedded system; Telecommunications","score_opus":0.08258282399671026,"score_gpt":0.48274153924952623,"score_spread":0.400158715252816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418443730","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001962592,0.63432574,0.3650681,0.0000041585045,0.000055801695,0.0001701561,0.000011367409,0.000003556196,0.00016483193],"genre_scores_gemma":[0.00013120567,0.8481082,0.15112825,0.000057395584,0.000027809072,0.00007369707,0.00041012093,0.000024142393,0.00003920889],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99699664,0.0013270162,0.00065675646,0.0007200308,0.00006743525,0.00023210456],"domain_scores_gemma":[0.9989744,0.00002611739,0.0002611486,0.00063175644,0.00004214263,0.00006446633],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006945041,0.00031820452,0.0013126091,0.0006195386,0.000023385099,0.000008399634,0.00029600548,0.0006490932,0.00001005177],"category_scores_gemma":[0.00014201531,0.0002760986,0.00043602072,0.0006230348,0.00007694644,0.0000011573547,0.00015449124,0.00018108115,4.1788755e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011075857,0.0000437968,0.000021216916,0.0002769993,0.00057173864,0.0000013186984,0.000018343577,0.00013276702,0.1796898,0.0002493342,0.0000051714596,0.8189784],"study_design_scores_gemma":[0.0008556805,0.0005404805,0.000039009323,0.0014277061,0.005126242,0.000020050222,0.00006967189,0.0048382613,0.0632222,0.0011772487,0.92115414,0.0015292906],"about_ca_topic_score_codex":0.000011466376,"about_ca_topic_score_gemma":0.0000035443768,"teacher_disagreement_score":0.921149,"about_ca_system_score_codex":0.000020400303,"about_ca_system_score_gemma":0.00009102246,"threshold_uncertainty_score":0.9999691},"labels":[],"label_agreement":null},{"id":"W2418505177","doi":"10.1007/978-1-61779-005-8_13","title":"Visualizing mRNAs in Fixed and Living Yeast Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Messenger RNA; Green fluorescent protein; Cell biology; In situ hybridization; Biology; Translation (biology); Saccharomyces cerevisiae; RNA; P-bodies; Yeast; Molecular biology; Biochemistry; Gene","score_opus":0.03747438496730723,"score_gpt":0.39962814201621144,"score_spread":0.36215375704890423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418505177","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73212385,0.001058625,0.26493302,0.000015096,0.00007749444,0.00014161029,0.0000022254528,0.0000068249583,0.0016412567],"genre_scores_gemma":[0.43649748,0.00031412506,0.56248844,0.00026688437,0.000038768972,0.000036998914,0.0000085899155,0.00003062308,0.00031808965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978941,0.00095852226,0.00024604372,0.00043247634,0.000047104983,0.00042176712],"domain_scores_gemma":[0.9995345,0.000047449303,0.000048231755,0.0002620278,0.000024566458,0.00008322333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013682486,0.0001486403,0.00021320098,0.00014653223,0.0000340333,0.00001274524,0.00019330309,0.00022632586,0.00002610353],"category_scores_gemma":[0.0004489803,0.00014527324,0.000048933245,0.00015583706,0.00012370101,0.0000028662128,0.00027755485,0.00018667545,0.0000024023666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033321845,0.000038271235,0.015603969,0.000011952472,0.0000136966555,0.000022670649,0.00011466991,0.0000032711177,0.97393197,0.00035125652,0.000010103393,0.009864863],"study_design_scores_gemma":[0.00037053283,0.0002513774,0.0053672614,0.000033316723,0.0000037675763,0.000016056238,0.00016120057,0.00028087865,0.99180365,0.0006802775,0.0008232714,0.00020843474],"about_ca_topic_score_codex":0.00035446248,"about_ca_topic_score_gemma":0.0001225837,"teacher_disagreement_score":0.29755542,"about_ca_system_score_codex":0.000014027214,"about_ca_system_score_gemma":0.000034272165,"threshold_uncertainty_score":0.5924071},"labels":[],"label_agreement":null},{"id":"W2418508285","doi":"10.1007/978-1-61779-851-1_31","title":"Assessing Urinary Tract Defects in Mice: Methods to Detect the Presence of Vesicoureteric Reflux and Urinary Tract Obstruction","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Children's Hospital","funders":"","keywords":"Vesicoureteric reflux; Urinary system; Renal pelvis; Reflux; Urology; Urinary tract obstruction; Medicine; Kidney; Urinary bladder; Vesicoureteral reflux; Pathology; Internal medicine","score_opus":0.026595523938949348,"score_gpt":0.40742911363872303,"score_spread":0.38083358969977366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418508285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7647171,0.00875265,0.22563641,0.000065947424,0.00029804072,0.000229262,0.0000017780457,0.0000055152677,0.00029328876],"genre_scores_gemma":[0.62224555,0.00028771334,0.3772351,0.00010991292,0.00005146413,0.000036288493,0.000005420027,0.000016268214,0.000012228205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960018,0.0027341214,0.00037268276,0.00040828635,0.000067381596,0.0004157468],"domain_scores_gemma":[0.9991816,0.00022748967,0.00015232038,0.00031834835,0.000031574567,0.00008865396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022635097,0.00021166069,0.0003085095,0.00015690777,0.00004959438,0.0000136720555,0.00023517865,0.00039234743,0.0000040694167],"category_scores_gemma":[0.00047597804,0.00015714108,0.00009990217,0.00030847438,0.00019266251,0.000014587502,0.00017107675,0.0003392782,5.875448e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000085719264,0.000103628874,0.0049655405,0.00003540818,0.000026377415,0.000013230386,0.00013364162,0.00014432709,0.93573225,0.00003418032,0.0000035419437,0.058722164],"study_design_scores_gemma":[0.00037034458,0.0008955772,0.04278909,0.0000459377,0.00003441361,0.00061195384,0.00014908743,0.00007929722,0.95207745,0.0009302435,0.001782944,0.00023366204],"about_ca_topic_score_codex":0.0000373423,"about_ca_topic_score_gemma":0.0000010870809,"teacher_disagreement_score":0.15159872,"about_ca_system_score_codex":0.000034461722,"about_ca_system_score_gemma":0.00004949841,"threshold_uncertainty_score":0.64080274},"labels":[],"label_agreement":null},{"id":"W2418562037","doi":"10.1007/978-1-4939-2253-6_13","title":"Extracting, Enriching, and Identifying Nuclear Body Sub-Complexes Using Label-Based Quantitative Mass Spectrometry","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Stable isotope labeling by amino acids in cell culture; Proteome; Mass spectrometry; Chemistry; Isotope; Nuclear protein; Function (biology); Computational biology; Proteomics; Biochemistry; Chromatography; Biology; Cell biology; Nuclear physics","score_opus":0.044503419644226265,"score_gpt":0.43332965308386057,"score_spread":0.3888262334396343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418562037","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2753328,0.00020868088,0.72361803,0.00003928831,0.000018621315,0.000078885154,0.0000043204577,0.00006841702,0.0006309315],"genre_scores_gemma":[0.10020565,0.000023381455,0.8995508,0.00012142264,0.000021093034,0.000023316881,0.000009814417,0.00003688061,0.000007671655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861866,0.0003172503,0.00028588125,0.00044121433,0.000051416624,0.00028560375],"domain_scores_gemma":[0.9990042,0.0003961223,0.000198692,0.00031894364,0.000031841642,0.000050210398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008055423,0.00017646527,0.00027998083,0.00014847422,0.00012155603,0.000031094474,0.00020123478,0.00018405402,0.000043886655],"category_scores_gemma":[0.00049332314,0.00018850424,0.000050393606,0.00020008374,0.00014646759,0.00003866678,0.00009071465,0.0003794977,0.0000016022857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011188486,0.000027996775,0.00080370606,0.000035671965,0.000011954402,0.0000033029644,0.000028856015,0.000036588674,0.9529596,0.0437446,7.062721e-7,0.0023358094],"study_design_scores_gemma":[0.00025774856,0.000035056404,0.000031228596,0.000030633833,0.000015394555,0.00000841475,0.000049537874,0.021427354,0.89029574,0.08697834,0.0006682324,0.0002022877],"about_ca_topic_score_codex":0.000045746685,"about_ca_topic_score_gemma":0.0000020657826,"teacher_disagreement_score":0.17593274,"about_ca_system_score_codex":0.000056847293,"about_ca_system_score_gemma":0.000013516198,"threshold_uncertainty_score":0.768698},"labels":[],"label_agreement":null},{"id":"W2418577155","doi":"10.1007/978-1-60761-594-1_20","title":"Therapeutic Potential of HDPs as Immunomodulatory Agents","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Genome British Columbia; Sanofi; Bill and Melinda Gates Foundation; Foundation for the National Institutes of Health","keywords":"Innate immune system; Flourishing; Antibiotics; Antimicrobial; Intervention (counseling); Biology; Immune system; Medicine; Immunology; Microbiology; Psychology","score_opus":0.016428259194809475,"score_gpt":0.3473895788578245,"score_spread":0.330961319663015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418577155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5945567,0.006827968,0.39482278,0.00027379376,0.0007842459,0.0002513004,0.000011984091,0.00004341802,0.0024278297],"genre_scores_gemma":[0.938098,0.000109549044,0.06036327,0.0009942375,0.000012786488,0.0000043871955,0.000030789903,0.000012856201,0.00037411423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997959,0.0010483762,0.00034641445,0.00028645655,0.000016353652,0.00034339688],"domain_scores_gemma":[0.9994503,0.00007090057,0.00013692626,0.0002962416,0.00003367138,0.000011926565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051890593,0.00017740157,0.00040870052,0.00016762846,0.000048864058,0.0000044505814,0.00026530173,0.00034455772,0.00031984682],"category_scores_gemma":[0.00006296284,0.00016042075,0.00016254638,0.00012706577,0.00030289716,0.00003060327,0.000066354616,0.0002730526,0.000042137875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091422145,0.0001134462,0.0002096079,0.000004521572,0.00008460924,0.000010758915,0.00007750283,0.000025078534,0.93106925,0.007538884,0.000041277053,0.060733628],"study_design_scores_gemma":[0.0005920958,0.0004431916,0.003916159,0.000016608124,0.000030050198,0.00006314114,0.00008657882,0.000009084155,0.9694132,0.02214414,0.0030977116,0.00018803474],"about_ca_topic_score_codex":0.00009295517,"about_ca_topic_score_gemma":0.0000011415758,"teacher_disagreement_score":0.34354132,"about_ca_system_score_codex":0.00002127632,"about_ca_system_score_gemma":0.000039829272,"threshold_uncertainty_score":0.65417683},"labels":[],"label_agreement":null},{"id":"W2418594924","doi":"10.1007/978-1-62703-649-8_35","title":"Single-Molecule Fluorescence of Nucleic Acids","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Engineering and Physical Sciences Research Council","keywords":"Nucleic acid; Förster resonance energy transfer; Nucleic acid structure; Single-molecule FRET; Single-molecule experiment; DNA; RNA; Biophysics; Fluorescence; Molecule; Nanotechnology; Nucleic acid quantitation; Chemistry; Computational biology; Biology; Biochemistry; Materials science; Physics","score_opus":0.01593884644622696,"score_gpt":0.35556160550609117,"score_spread":0.3396227590598642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418594924","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33154,0.0004879515,0.6661848,0.00014403077,0.00007303963,0.00025174342,0.0000058935834,0.000032259904,0.0012803244],"genre_scores_gemma":[0.41298667,0.000051886993,0.5866029,0.00021023951,0.000023338383,0.000018948931,0.00002922553,0.000018471912,0.000058289366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799347,0.0006174609,0.0004328029,0.0005193027,0.00007836235,0.0003585954],"domain_scores_gemma":[0.9989983,0.00003617974,0.00016425566,0.0005904717,0.00014464282,0.00006619523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004910526,0.00022321197,0.00035124677,0.00016493475,0.000027642773,0.000010677696,0.00033283836,0.0003357966,0.000013401831],"category_scores_gemma":[0.0004464799,0.00019875284,0.0001678405,0.0003227577,0.00034187344,0.0000038339454,0.00020920986,0.00014577624,0.000003886802],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001705534,0.0000849592,0.0014397588,0.000009241041,0.00003290866,0.0000034160948,0.000008875368,0.0000032269957,0.96843255,0.00032850745,0.00005443868,0.029585045],"study_design_scores_gemma":[0.00021134637,0.00037583796,0.00035844033,0.000016011989,0.000014502483,0.000012508065,0.00002709367,0.00010436224,0.9942269,0.0027579812,0.0016671775,0.0002278748],"about_ca_topic_score_codex":0.000047820176,"about_ca_topic_score_gemma":0.0000064203887,"teacher_disagreement_score":0.08144668,"about_ca_system_score_codex":0.000018287808,"about_ca_system_score_gemma":0.000029156698,"threshold_uncertainty_score":0.81049055},"labels":[],"label_agreement":null},{"id":"W2418616007","doi":"10.1007/978-1-62703-992-5_4","title":"Hybridoma Technology for the Generation of Rodent mAbs via Classical Fusion","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Splenocyte; Monoclonal antibody; Hapten; Computational biology; Antigen; Hybridoma technology; Cell fusion; In vitro; Virology; Immunology; Biology; Antibody; Cell culture; Genetics","score_opus":0.05272881484500208,"score_gpt":0.4445563905072941,"score_spread":0.39182757566229204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418616007","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.101939924,0.0007275798,0.88649344,0.01010953,0.00015510694,0.0003592073,0.000002955321,0.000010139402,0.00020211717],"genre_scores_gemma":[0.17315431,0.00014511554,0.8253291,0.00066557387,0.00019195641,0.00011930878,0.000035461162,0.0000148565005,0.0003443214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877465,0.0004404722,0.00025925858,0.00022481685,0.00008518691,0.00021563604],"domain_scores_gemma":[0.9991092,0.00044324147,0.00005718101,0.00026241635,0.00009333582,0.00003460484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012335165,0.00009158764,0.00027508198,0.00016650141,0.000047460548,0.0000023789557,0.00014241172,0.00016866038,0.000028887853],"category_scores_gemma":[0.0006956255,0.000055367447,0.00009890837,0.00018619825,0.0002603835,0.0000054637035,0.00010562314,0.00018824307,0.0000030648553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001260954,0.000043107462,0.0015002589,0.000021551903,0.000023160012,0.0000029982295,0.00000918198,0.000011963685,0.7873478,0.023604535,0.000059024267,0.1872503],"study_design_scores_gemma":[0.0008073965,0.0008807967,0.0014059761,0.000015232485,0.00003235009,0.00006045816,0.0000108997,0.049922463,0.87081194,0.015886616,0.060085397,0.000080456295],"about_ca_topic_score_codex":0.00003574073,"about_ca_topic_score_gemma":0.0000125766865,"teacher_disagreement_score":0.18716985,"about_ca_system_score_codex":0.000019572275,"about_ca_system_score_gemma":0.000028800912,"threshold_uncertainty_score":0.2257819},"labels":[],"label_agreement":null},{"id":"W2418623445","doi":"10.1007/978-1-4939-3182-8_14","title":"Quantitation of Insulin Analogues in Serum Using Immunoaffinity Extraction, Liquid Chromatography, and Tandem Mass Spectrometry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital; University of British Columbia Hospital","funders":"","keywords":"Chromatography; Chemistry; Extraction (chemistry); Liquid chromatography–mass spectrometry; Mass spectrometry; Tandem mass spectrometry; Tandem; Affinity chromatography; Biochemistry; Materials science; Enzyme","score_opus":0.05712496833528319,"score_gpt":0.41196711466078434,"score_spread":0.35484214632550115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418623445","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6989039,0.002624303,0.2978669,0.000048573213,0.00010175602,0.000103738,0.0000019427107,0.0000113859915,0.00033746212],"genre_scores_gemma":[0.5106517,0.00008919863,0.48915938,0.000068045345,0.000010216892,0.0000036553047,0.000009494905,0.0000060693214,0.000002232394],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998473,0.0007459084,0.0003524495,0.00020055965,0.00006692357,0.00016117583],"domain_scores_gemma":[0.9993918,0.00020239521,0.00011351787,0.00015664569,0.000076988166,0.000058631722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015386564,0.00010395879,0.00039216827,0.0006046738,0.000012197223,0.0000037456875,0.00003851418,0.00016448826,0.000014740216],"category_scores_gemma":[0.0013766198,0.00009654733,0.000046306086,0.000685806,0.0001230986,0.0000357964,0.000022936223,0.0001594429,7.177524e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013703821,0.00006473813,0.19735512,0.00002566019,0.00003127877,0.000010598023,0.000080822756,0.000017809067,0.8008223,0.0006798674,0.0000013110305,0.00077344786],"study_design_scores_gemma":[0.0036034994,0.001627093,0.2344229,0.00013273612,0.000089081805,0.000067006695,0.0009585696,0.0028459528,0.7449292,0.010968643,0.00013169523,0.00022364123],"about_ca_topic_score_codex":0.00017940832,"about_ca_topic_score_gemma":0.000009070475,"teacher_disagreement_score":0.19129246,"about_ca_system_score_codex":0.000049957107,"about_ca_system_score_gemma":0.000075986245,"threshold_uncertainty_score":0.3937086},"labels":[],"label_agreement":null},{"id":"W2418624112","doi":"10.1007/978-1-61779-139-0_11","title":"Measuring Immune Receptor Mobility by Fluorescence Recovery After Photobleaching","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Fluorescence recovery after photobleaching; Photobleaching; Immune system; Cell biology; Receptor; Fluorescence; Extracellular matrix; Biophysics; Extracellular; Cytosol; Bimolecular fluorescence complementation; Chemistry; Biology; Membrane; Biochemistry; Immunology; Optics; Physics; Gene","score_opus":0.022345231683788703,"score_gpt":0.33975297919224234,"score_spread":0.31740774750845363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418624112","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1268728,0.0035300127,0.86836666,0.000015649648,0.00022409161,0.00039537763,0.000025939089,0.000055366003,0.0005140866],"genre_scores_gemma":[0.055262078,0.00038965518,0.9436671,0.00020490112,0.000030430032,0.00025843954,0.00006427314,0.000056793193,0.00006632083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966956,0.0011786672,0.00053018605,0.0009187395,0.00008139793,0.0005954169],"domain_scores_gemma":[0.99877167,0.000036495945,0.00015125134,0.00087634183,0.00007424081,0.000090005175],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016468684,0.0003428717,0.00037989972,0.00011647676,0.00005724349,0.000012470813,0.0005508459,0.00047826205,0.00008156814],"category_scores_gemma":[0.00065170345,0.0003495961,0.00016939834,0.0001969176,0.00032435945,0.000010608336,0.0003932885,0.00040132235,0.0000080451055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003560989,0.000119352495,0.0029789535,0.000017471708,0.000026651165,0.000007381184,0.00006221665,0.0000017997121,0.9786345,0.000049064613,0.000045350313,0.017701166],"study_design_scores_gemma":[0.00024876036,0.00038350225,0.00046062897,0.000037263355,0.000008660912,0.000007734057,0.000026791367,0.000011178562,0.99340045,0.0019984874,0.0030299353,0.00038657736],"about_ca_topic_score_codex":0.00014221924,"about_ca_topic_score_gemma":0.0000095628675,"teacher_disagreement_score":0.075300425,"about_ca_system_score_codex":0.0000718527,"about_ca_system_score_gemma":0.00005143054,"threshold_uncertainty_score":0.99989563},"labels":[],"label_agreement":null},{"id":"W2418748546","doi":"10.1007/978-1-62703-284-1_25","title":"Analysis of p300 Occupancy at the Early Stage of Stem Cell Differentiation by Chromatin Immunoprecipitation","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Chromatin immunoprecipitation; Chromatin; Embryoid body; Immunoprecipitation; Biology; Cell biology; genomic DNA; Induced pluripotent stem cell; Computational biology; DNA; Embryonic stem cell; Gene; Genetics; Gene expression","score_opus":0.007411083814000124,"score_gpt":0.2965148070924701,"score_spread":0.28910372327846995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418748546","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73827475,0.0008037925,0.2604355,0.000018737363,0.000047557252,0.00020672422,0.00007140561,0.00000225629,0.00013929897],"genre_scores_gemma":[0.9466658,0.00012619988,0.0521543,0.000038048453,0.00000545842,0.00004997746,0.00041203873,0.00001627446,0.00053190684],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816966,0.0007701841,0.0005128927,0.0002865792,0.00007328614,0.00018741009],"domain_scores_gemma":[0.998872,0.00007592888,0.00041167517,0.0005162979,0.00009890625,0.000025195395],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051293557,0.0001504379,0.00033546443,0.00013276789,0.000031271018,0.000008261641,0.00028105895,0.00020643919,0.00007278126],"category_scores_gemma":[0.00003513263,0.00011981395,0.00018417632,0.00032334714,0.00012013151,0.00000266847,0.00017416281,0.00007511467,0.0000018916493],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015255509,0.000053299133,0.024677457,0.000024470297,0.00024789153,1.11343184e-7,0.00012211315,0.0003905779,0.9697671,0.00008784205,0.00001592447,0.004597944],"study_design_scores_gemma":[0.000300423,0.00019523593,0.056638695,0.0000038143885,0.000125194,2.9716747e-7,0.00009499117,0.0037267862,0.93846244,0.00016969314,0.00015217683,0.00013024476],"about_ca_topic_score_codex":0.0002636002,"about_ca_topic_score_gemma":0.000047258127,"teacher_disagreement_score":0.20839106,"about_ca_system_score_codex":0.000024523992,"about_ca_system_score_gemma":0.00002121292,"threshold_uncertainty_score":0.4885871},"labels":[],"label_agreement":null},{"id":"W2418762161","doi":"10.1007/978-1-62703-008-3_4","title":"Rational Design of Peptide Ligands Against a Glycolipid by NMR Studies","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Glycosphingolipid; Chemistry; Rational design; Peptide; Ganglioside; Glycolipid; Biophysics; Biochemistry; Stereochemistry; Nanotechnology; Biology; Materials science","score_opus":0.053708882589590834,"score_gpt":0.43446693341941417,"score_spread":0.38075805082982334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418762161","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13639937,0.00866717,0.8536618,0.00015160676,0.00014599338,0.0003951177,0.000017127464,0.000008661509,0.00055314926],"genre_scores_gemma":[0.3692087,0.00085226307,0.6283079,0.00058175466,0.00014840922,0.00018472619,0.00016832197,0.0000335534,0.0005144221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769795,0.0010492665,0.00038326147,0.00031494407,0.000122044774,0.00043254413],"domain_scores_gemma":[0.99918723,0.00012557491,0.00011485195,0.00032510058,0.0001546954,0.00009255386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020473225,0.00018253036,0.00030249197,0.00013941232,0.00004511011,0.0000059520794,0.00022306081,0.00024986942,0.000025059495],"category_scores_gemma":[0.0013359026,0.00016597543,0.000093777955,0.00022801242,0.00023520051,0.0000050962026,0.000182426,0.00015005645,0.000005931815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011163574,0.00010368276,0.0025527913,0.00001925321,0.00009039359,0.0000013953704,0.000074688905,0.00022968178,0.9902343,0.0005925638,0.0009231383,0.0050664856],"study_design_scores_gemma":[0.0006223703,0.00028555185,0.0002003504,0.000010621381,0.000008075102,0.000006475767,0.000082996885,0.00019336854,0.97878057,0.0005001782,0.019130317,0.00017911226],"about_ca_topic_score_codex":0.000007876946,"about_ca_topic_score_gemma":0.0000024426804,"teacher_disagreement_score":0.23280932,"about_ca_system_score_codex":0.000027144533,"about_ca_system_score_gemma":0.00007863136,"threshold_uncertainty_score":0.6768282},"labels":[],"label_agreement":null},{"id":"W2418762184","doi":"10.1007/978-1-62703-299-5_3","title":"Metabolic Model Refinement Using Phenotypic Microarray Data","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Phenotype; Computational biology; Microarray analysis techniques; Microarray; Gene; Profiling (computer programming); Gene expression profiling; Biology; Computer science; Genetics; Gene expression","score_opus":0.04019064505751835,"score_gpt":0.36640533811063797,"score_spread":0.3262146930531196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418762184","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21836072,0.0037771808,0.777015,0.000120488796,0.00032471822,0.00024140817,0.0000176153,0.00001719931,0.00012569712],"genre_scores_gemma":[0.04710259,0.00023818402,0.95155334,0.0003779384,0.0002104948,0.000032159816,0.00025091344,0.000037320013,0.00019704746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803334,0.00039573718,0.0003527587,0.0007663568,0.00005288847,0.0003989181],"domain_scores_gemma":[0.9985665,0.000005461563,0.00008537403,0.0012095323,0.00006719775,0.00006594006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008997817,0.00023526962,0.00029605828,0.00012938424,0.00004091691,0.000018911269,0.00054358516,0.00025295716,0.00003438756],"category_scores_gemma":[0.00027867945,0.00021738495,0.00006487421,0.00020215636,0.0000878827,0.000006388066,0.00043422886,0.00016596605,0.000009645931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009276705,0.00004096925,0.00013982723,0.000010018112,0.00004528977,5.9554367e-7,0.000012026189,0.0032697492,0.9825523,0.00038615183,0.00015934376,0.013374481],"study_design_scores_gemma":[0.00035693904,0.000042880714,0.00012598628,0.0000075351886,0.000034015957,0.000019658195,0.000012735616,0.018932946,0.9560486,0.00086277083,0.02324597,0.0003099575],"about_ca_topic_score_codex":0.00018609439,"about_ca_topic_score_gemma":0.000009776698,"teacher_disagreement_score":0.17453839,"about_ca_system_score_codex":0.000013690524,"about_ca_system_score_gemma":0.000056378543,"threshold_uncertainty_score":0.8864701},"labels":[],"label_agreement":null},{"id":"W2418775906","doi":"10.1007/978-1-61779-108-6_3","title":"Estimation of Cell Number Based on Metabolic Activity: The MTT Reduction Assay","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":91,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shriners Hospitals for Children - Canada","funders":"","keywords":"Metabolic activity; Reduction (mathematics); MTT assay; Biology; Chemistry; Cell; Biological system; Biochemistry; Mathematics","score_opus":0.02490486985643685,"score_gpt":0.35219109042717994,"score_spread":0.3272862205707431,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418775906","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20225108,0.00039251303,0.7899297,0.00007160094,0.000261371,0.00020207517,0.0000068916784,0.000006661916,0.0068781245],"genre_scores_gemma":[0.6384173,0.00010309065,0.36121103,0.00011136178,0.000023568213,0.00004151252,0.000013110602,0.000014595017,0.000064419175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775517,0.0013126786,0.0002484535,0.00037328285,0.00007449167,0.00023591459],"domain_scores_gemma":[0.9991668,0.0000630914,0.00017993248,0.0005103214,0.000049961574,0.000029912162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015649771,0.0001811136,0.00029615688,0.0001092515,0.000047356938,0.0000044707494,0.00021682071,0.00019705843,0.000038217906],"category_scores_gemma":[0.00037613625,0.00013421623,0.00013436264,0.00025322638,0.00017237864,0.0000022925858,0.000094219846,0.00015996386,0.000003675073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008358207,0.00014021917,0.0006300718,0.000008791179,0.00004424295,8.07648e-7,0.000039119946,0.00026838903,0.9762158,0.0034241194,0.000027891067,0.01911699],"study_design_scores_gemma":[0.00035411297,0.00021095708,0.0016673487,0.0000035446624,0.000039779272,0.0000040390273,0.000020268926,0.0011101968,0.9904974,0.0041614086,0.0017904135,0.0001405116],"about_ca_topic_score_codex":0.000052620868,"about_ca_topic_score_gemma":0.0000033499161,"teacher_disagreement_score":0.43616626,"about_ca_system_score_codex":0.000009937618,"about_ca_system_score_gemma":0.000040588926,"threshold_uncertainty_score":0.5473179},"labels":[],"label_agreement":null},{"id":"W2418788752","doi":"10.1007/978-1-59745-396-7","title":"Macrophages and Dendritic Cells","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Medicine, University of Toronto; Roy J. and Lucille A. Carver College of Medicine, University of Iowa; U.S. Department of Veterans Affairs; University of Toronto; University of Colorado Denver; University of Cape Town; Hospital for Sick Children; University of Pennsylvania; Agency for Science, Technology and Research; Università degli Studi di Milano-Bicocca; College of Veterinary Medicine, Cornell University; Chang Gung University; Karolinska Institutet; Institut National de la Santé et de la Recherche Médicale; Centre National de la Recherche Scientifique; Vrije Universiteit Amsterdam; Weizmann Institute of Science; University of Oxford; Chang Gung Medical Foundation; Imperial College London; TU Graz, Internationale Beziehungen und Mobilitätsprogramme; University Health Network; Vancouver Coastal Health Research Institute; Toronto General Hospital Research Institute, University Health Network; Universitat de Barcelona; Institute for Research in Biomedicine","keywords":"Cell biology; Biology","score_opus":0.012642958623793537,"score_gpt":0.334701113634262,"score_spread":0.32205815501046847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418788752","genre_codex":"review","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015228473,0.65600705,0.20498481,0.00033292986,0.0029515552,0.0013607609,0.00008921357,0.00021019745,0.13254061],"genre_scores_gemma":[0.00010916114,0.0070497342,0.20555039,0.001663673,0.00004779295,0.00005127683,0.00025104382,0.000112728536,0.7851642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950506,0.0030837248,0.00056759774,0.0006759119,0.00002169835,0.00060048635],"domain_scores_gemma":[0.9984011,0.0007757242,0.00019635951,0.0005648135,0.00004161862,0.000020395164],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0010614243,0.00051234104,0.0009909403,0.0004713031,0.00009109773,0.000017004444,0.0004115796,0.0017665713,0.00044432064],"category_scores_gemma":[0.00017913854,0.00048430808,0.00019695661,0.00009475889,0.00069092965,0.000022163249,0.00016329986,0.0010919403,0.00014238262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015263815,0.00004098726,0.0000056268614,0.000031501877,0.00018837431,0.00008011496,0.00008090064,5.3277836e-7,0.8979863,0.004857311,0.0011865502,0.095389165],"study_design_scores_gemma":[0.00094116863,0.00042253433,0.000039741284,0.00010127478,0.000064589316,0.0001996089,0.0000120569775,4.3924808e-7,0.49037406,0.019282091,0.48811027,0.00045216572],"about_ca_topic_score_codex":0.000017984665,"about_ca_topic_score_gemma":0.0000024652754,"teacher_disagreement_score":0.6526236,"about_ca_system_score_codex":0.00008548373,"about_ca_system_score_gemma":0.00018444519,"threshold_uncertainty_score":0.99976087},"labels":[],"label_agreement":null},{"id":"W2418831674","doi":"10.1007/978-1-62703-511-8_10","title":"Immune Responses After Mesenchymal Stem Cell Implantation","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Health Sciences North","funders":"","keywords":"Mesenchymal stem cell; Immune system; Stromal cell; Stem cell; Transplantation; In vivo; Immunology; In vitro; Cell; Biology; Medicine; Cell biology; Cancer research; Internal medicine","score_opus":0.10730896331736225,"score_gpt":0.5103938122741878,"score_spread":0.4030848489568255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418831674","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018348219,0.9436693,0.05041615,0.000036223857,0.0003414328,0.0024920248,0.00002786148,0.000041780004,0.002791744],"genre_scores_gemma":[0.0000050024455,0.74965256,0.24486864,0.000061160514,0.00007519596,0.00097167015,0.0001285087,0.000093913404,0.004143342],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.986723,0.009789215,0.0013399939,0.0009840054,0.00028893928,0.0008748434],"domain_scores_gemma":[0.99639684,0.0017670958,0.0003699244,0.0010907936,0.00014094426,0.00023440813],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0038315468,0.00064514176,0.0029720804,0.0010639008,0.000038898554,0.00003126632,0.000442462,0.0012705086,0.000730319],"category_scores_gemma":[0.00047889128,0.00047805306,0.00068718847,0.0007663951,0.0002174724,0.00003131935,0.00038766192,0.0013555043,0.00044690695],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013802937,0.000077301724,0.000051326777,0.009860186,0.00012466937,0.0008226728,0.000040627387,7.753707e-8,0.018780727,0.000101890946,0.000026266529,0.96997625],"study_design_scores_gemma":[0.00067570974,0.0005616869,0.000051147745,0.003560333,0.0005156434,0.00072890177,0.000032786407,0.000009593833,0.008460577,0.00019293232,0.98463124,0.000579446],"about_ca_topic_score_codex":0.0000956381,"about_ca_topic_score_gemma":0.0000023207958,"teacher_disagreement_score":0.98460495,"about_ca_system_score_codex":0.0002870939,"about_ca_system_score_gemma":0.00060416304,"threshold_uncertainty_score":0.9997671},"labels":[],"label_agreement":null},{"id":"W2418884099","doi":"10.1007/978-1-59745-117-8_10","title":"Comparison of Protein Expression by Isotope-Coded Affinity Tag Labeling","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammatory mediators and NSAID effects","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institute for Theoretical Astrophysics","keywords":"Chemistry; Trypsin; Celecoxib; Biochemistry; Affinity chromatography; Target protein; Cell culture; Molecular biology; Chromatography; Enzyme; Biology","score_opus":0.04064255320477921,"score_gpt":0.42235351773450897,"score_spread":0.38171096452972975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2418884099","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.744453,0.0012896255,0.25326803,0.00005139278,0.000114964394,0.00048650862,0.0000031256714,0.000025565345,0.00030776873],"genre_scores_gemma":[0.4287669,0.000019635712,0.5708989,0.00012230514,0.000030434618,0.00006412754,0.000021248483,0.000018818744,0.00005759874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975754,0.0012818457,0.00046366235,0.00028697238,0.00011304506,0.0002790915],"domain_scores_gemma":[0.99917895,0.00018491405,0.00016469955,0.0003216273,0.00006305679,0.000086769316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011564966,0.00016331495,0.0006490216,0.0001369424,0.000043846136,0.0000014054099,0.00011575106,0.0002888759,0.00004847758],"category_scores_gemma":[0.0009959876,0.00013502724,0.00008821042,0.00020099927,0.00016447701,0.000016063597,0.00007232425,0.000346493,0.000005377121],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015057907,0.00016944697,0.03574051,0.000083337996,0.000014736862,0.000045656667,0.00026365567,0.0000075006697,0.96014255,0.00010493615,0.00012310455,0.0031539598],"study_design_scores_gemma":[0.0011955035,0.00039526168,0.0007263344,0.00010446602,0.000014242406,0.000014773782,0.000031438223,0.00040901292,0.9948821,0.00021358534,0.0018880679,0.0001252038],"about_ca_topic_score_codex":0.000034190343,"about_ca_topic_score_gemma":0.0000014540168,"teacher_disagreement_score":0.3176309,"about_ca_system_score_codex":0.00003182789,"about_ca_system_score_gemma":0.00006578743,"threshold_uncertainty_score":0.5506251},"labels":[],"label_agreement":null},{"id":"W2419033528","doi":"10.1007/978-1-4939-2343-4_23","title":"Molecular Dynamics Simulations of Membrane- and Protein-Bound Glycolipids Using GLYCAM","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Molecular dynamics; Glycolipid; Suite; Force field (fiction); Dynamics (music); Chemistry; Computer science; Set (abstract data type); Lipid bilayer; Biological system; Membrane; Biophysics; Computational chemistry; Physics; Biology; Artificial intelligence; Biochemistry","score_opus":0.028227683738639684,"score_gpt":0.38190824813357704,"score_spread":0.35368056439493734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419033528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72013915,0.00032480762,0.2786871,0.000040108094,0.00016448757,0.0003506182,0.000028119935,0.000008560982,0.00025704195],"genre_scores_gemma":[0.68902874,0.000006660029,0.31062058,0.0001067762,0.000056304558,0.000016747852,0.000090717695,0.000032506032,0.000040954317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978495,0.0007266861,0.00044008085,0.00052112824,0.00011122215,0.00035134656],"domain_scores_gemma":[0.99901956,0.000029583434,0.00015902337,0.00049844873,0.00015606137,0.00013732722],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000616521,0.0002652801,0.00040286194,0.00017199428,0.00003768311,0.0000143308625,0.00023604547,0.00042127343,0.0000068994113],"category_scores_gemma":[0.00044327544,0.00025720353,0.00010050935,0.00026664863,0.00031651944,0.000005644934,0.0002317631,0.00017498939,3.704964e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088906214,0.00004969146,0.001776225,0.000033486343,0.000043140662,0.000010840081,0.000050400922,0.0014534952,0.9927083,0.0018925925,9.3192466e-7,0.0018919416],"study_design_scores_gemma":[0.0010616839,0.00031808857,0.00007385124,0.000017053746,0.00005844953,0.0000473078,0.00006241215,0.0035676276,0.9917201,0.0019336655,0.00085002446,0.00028974595],"about_ca_topic_score_codex":0.00010473713,"about_ca_topic_score_gemma":0.000046479996,"teacher_disagreement_score":0.0319335,"about_ca_system_score_codex":0.00005127433,"about_ca_system_score_gemma":0.00023971818,"threshold_uncertainty_score":0.999988},"labels":[],"label_agreement":null},{"id":"W2419139474","doi":"10.1007/978-1-59745-060-7_17","title":"Isolation, Propagation, and Characterization of Human Umbilical Cord Perivascular Cells (HUCPVCs)","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":77,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Mesenchymal stem cell; CD90; Cord lining; Bone marrow; CD34; CD146; Progenitor cell; Haematopoiesis; Umbilical cord; Immunology; Biology; Cell biology; Pathology; In vitro; Stem cell; Medicine; Adult stem cell; Endothelial stem cell","score_opus":0.04854546353513271,"score_gpt":0.41686753759344414,"score_spread":0.3683220740583114,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419139474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6178717,0.000096105854,0.381271,0.00009344671,0.00002959204,0.0003633938,0.0000012919412,0.0000102262,0.00026321757],"genre_scores_gemma":[0.69731045,0.00012346302,0.30205405,0.00011821123,0.00003567953,0.00003899977,0.000072206014,0.000021549466,0.00022537906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978842,0.0010178058,0.00040877415,0.00033190576,0.00014566058,0.00021166829],"domain_scores_gemma":[0.999252,0.00009262011,0.00009626923,0.00029905987,0.00017351459,0.00008651255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010855393,0.00011640076,0.00037939247,0.00020677964,0.000055135923,0.0000034871089,0.00008354923,0.00019127362,0.00010942217],"category_scores_gemma":[0.00038222177,0.0001040295,0.000059048434,0.0003141649,0.00032270636,0.000025058958,0.0000775329,0.00019416507,0.0000033495592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006111041,0.000073410854,0.034946565,0.00007421423,0.000020059664,0.000027977992,0.00014032991,6.6124596e-7,0.9597607,0.0007945335,0.0000024494848,0.004097991],"study_design_scores_gemma":[0.000713758,0.0006263825,0.08409075,0.000025669508,0.000016713222,0.00008065477,0.000014061104,0.000731853,0.91263664,0.0004433278,0.0005205191,0.00009969247],"about_ca_topic_score_codex":0.00003662588,"about_ca_topic_score_gemma":0.0000014478434,"teacher_disagreement_score":0.079438746,"about_ca_system_score_codex":0.0000344627,"about_ca_system_score_gemma":0.000066417946,"threshold_uncertainty_score":0.42422},"labels":[],"label_agreement":null},{"id":"W2419155164","doi":"10.1007/978-1-61779-968-6_20","title":"Selecting and Purifying Autonomous Human Variable Heavy (VH) Domains","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Computational biology; Variable (mathematics); Antibody; Computer science; Phage display; Domain (mathematical analysis); Biology; Chemistry; Mathematics; Immunology","score_opus":0.04990806384759458,"score_gpt":0.4603318183487376,"score_spread":0.410423754501143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419155164","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6879644,0.0057936534,0.28963244,0.00070059724,0.00019853695,0.00036521204,0.0000038170447,0.000052456355,0.015288884],"genre_scores_gemma":[0.16510779,0.00006024234,0.8331834,0.0007356832,0.00018167215,0.000028749375,0.000018114428,0.000023510915,0.0006608341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980058,0.0007475176,0.000261182,0.00027144467,0.00008284427,0.0006311838],"domain_scores_gemma":[0.999284,0.00027040986,0.0000462429,0.00018252911,0.000036201443,0.00018060456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020352742,0.00015114897,0.0003641477,0.00018365418,0.00012420065,0.000011099997,0.00008531496,0.00018530639,0.00010173479],"category_scores_gemma":[0.00035938484,0.00012581112,0.000054520056,0.0002519947,0.00015069307,0.000032121217,0.0001622176,0.00044072757,0.0000065330732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005487994,0.000082202096,0.094102964,0.00007000359,0.000050936553,0.00002958949,0.00019065912,0.0000014784846,0.86729896,0.024035227,0.000018403292,0.014064709],"study_design_scores_gemma":[0.0029881878,0.001372218,0.050056446,0.00017794705,0.0001412825,0.0015510375,0.00026871453,0.0009210271,0.7802774,0.031999134,0.12939362,0.000853038],"about_ca_topic_score_codex":0.00024442072,"about_ca_topic_score_gemma":0.0000042899096,"teacher_disagreement_score":0.54355097,"about_ca_system_score_codex":0.000053242104,"about_ca_system_score_gemma":0.000047429916,"threshold_uncertainty_score":0.5130428},"labels":[],"label_agreement":null},{"id":"W2419181704","doi":"10.1007/978-1-4939-1755-6_2","title":"Single-Cell Microinjection Coupled to Confocal Microscopy to Characterize Nuclear Membrane Receptors in Freshly Isolated Cardiomyocytes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"","keywords":"Microinjection; Cytoplasm; Membrane; Intracellular; Cell biology; Biophysics; Chemistry; Cell membrane; Confocal microscopy; Lipid bilayer; Biochemistry; Biology","score_opus":0.013907795511042318,"score_gpt":0.3113983121088879,"score_spread":0.2974905165978456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419181704","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7243387,0.00012697636,0.27420968,0.00020080878,0.00048154514,0.00031872615,0.000009806653,0.000016698163,0.00029706422],"genre_scores_gemma":[0.66463083,0.00007779014,0.33020946,0.0042965403,0.00016449958,0.0000735673,0.00017877399,0.0000835876,0.00028492513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99714893,0.0009992991,0.00047518505,0.0007898992,0.00006548746,0.00052122155],"domain_scores_gemma":[0.99912024,0.000051506267,0.00008997875,0.0004970462,0.00009474755,0.00014648071],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009380735,0.0003029933,0.00047363795,0.0003180152,0.0000395971,0.00003209474,0.00037698753,0.00045212766,0.00004356862],"category_scores_gemma":[0.00038455642,0.00031958107,0.00013252397,0.00035600647,0.00007923456,0.0000044792578,0.00023111695,0.00021859875,0.00006451342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048291654,0.00008654426,0.00071027526,0.000013328389,0.000027216967,0.000006528789,0.000119003824,0.00013253698,0.99311465,0.000018358696,0.00017935205,0.0051093097],"study_design_scores_gemma":[0.0006941107,0.0016271537,0.00028692526,0.000027915428,0.000010560213,0.000014779834,0.000046680332,0.00033345274,0.94584006,0.000039214054,0.050715867,0.00036327846],"about_ca_topic_score_codex":0.00026075463,"about_ca_topic_score_gemma":0.00011896932,"teacher_disagreement_score":0.059707846,"about_ca_system_score_codex":0.000059124974,"about_ca_system_score_gemma":0.000037927784,"threshold_uncertainty_score":0.9999256},"labels":[],"label_agreement":null},{"id":"W2419207896","doi":"10.1007/978-1-59745-170-3_30","title":"Virus Evolution as a Tool to Study HIV-1 Biology","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Biology; Replication (statistics); Viral replication; Genome; Viral evolution; Computational biology; Virus; Virology; Sequence (biology); Genetics; Human immunodeficiency virus (HIV); Mechanism (biology); Gene","score_opus":0.023672071027592716,"score_gpt":0.41807937494246633,"score_spread":0.3944073039148736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419207896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55418414,0.0019669414,0.44022274,0.0006901039,0.0002907192,0.0010521825,0.000046542867,0.000072871844,0.0014737807],"genre_scores_gemma":[0.8378845,0.000023124026,0.16038498,0.0008538628,0.00002152163,0.00021446346,0.00016735305,0.000016391396,0.00043382557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99441653,0.0037403514,0.00039452483,0.00067412667,0.000025922118,0.00074854406],"domain_scores_gemma":[0.99908227,0.0002056722,0.00006024938,0.0005383399,0.000058280384,0.00005517739],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013262236,0.00025686735,0.00047706018,0.00042379068,0.00010843706,0.000008502225,0.00036655087,0.00037316245,0.00050194986],"category_scores_gemma":[0.0007874533,0.00021588273,0.00010461338,0.00043158638,0.00013342968,0.000021865726,0.0001529909,0.00037843946,0.0021673643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026568843,0.0007716925,0.007976542,0.0000011211602,0.0001370618,0.00007861451,0.00022493795,0.000005029724,0.87204087,0.006764186,0.00009794149,0.11163629],"study_design_scores_gemma":[0.008766553,0.016620154,0.07765852,0.000019048135,0.00010460473,0.00020943863,0.00047135638,0.000007410144,0.7783051,0.0635175,0.05338379,0.0009364856],"about_ca_topic_score_codex":0.00029586453,"about_ca_topic_score_gemma":0.000032623942,"teacher_disagreement_score":0.28370035,"about_ca_system_score_codex":0.00013938833,"about_ca_system_score_gemma":0.00008216557,"threshold_uncertainty_score":0.99860954},"labels":[],"label_agreement":null},{"id":"W2419221128","doi":"10.1007/978-1-59745-519-0_31","title":"Near-Field Scanning Optical Microscopy to Identify Membrane Microdomains","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Steacie Institute for Molecular Sciences; Carleton University","funders":"","keywords":"Near-field scanning optical microscope; Membrane; Optical microscope; Microscopy; Resolution (logic); Materials science; Lipid raft; Nanoscopic scale; Monolayer; Nanotechnology; Chemistry; Optics; Scanning electron microscope; Physics; Computer science","score_opus":0.04417178850588987,"score_gpt":0.49111788721469835,"score_spread":0.44694609870880847,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419221128","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012844999,0.69712883,0.29872042,0.00003894019,0.0012243901,0.0009834194,0.000037997826,0.00002597452,0.0005555624],"genre_scores_gemma":[0.00000800274,0.42614472,0.5717894,0.000924479,0.00037720936,0.00011337418,0.00032281224,0.00012277074,0.0001972734],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948584,0.0012762807,0.0011280872,0.0015289746,0.00014650851,0.0010617768],"domain_scores_gemma":[0.9979347,0.00021602109,0.00025946222,0.0012019641,0.000089929206,0.0002979145],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018804264,0.0008456375,0.0019425736,0.00042442614,0.000098806406,0.00007337252,0.0010178676,0.0020581568,0.000056629367],"category_scores_gemma":[0.00085621024,0.0007561066,0.00077850505,0.0006385855,0.0002366771,0.0000030634371,0.00068602094,0.0008891786,0.00004507105],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029523615,0.00003287062,0.00001462706,0.0006589968,0.00008570238,0.00006324772,0.000012486745,0.0000018554767,0.6160812,0.000065398184,0.000077389705,0.3828767],"study_design_scores_gemma":[0.00020317895,0.0002226271,0.0000030548083,0.0004948995,0.00021122239,0.00013860133,0.000005432059,2.478068e-7,0.41277748,0.000017994536,0.5854154,0.00050979527],"about_ca_topic_score_codex":0.00003768096,"about_ca_topic_score_gemma":0.000021933374,"teacher_disagreement_score":0.58533806,"about_ca_system_score_codex":0.000074326825,"about_ca_system_score_gemma":0.00036191967,"threshold_uncertainty_score":0.999489},"labels":[],"label_agreement":null},{"id":"W2419226475","doi":"10.1007/978-1-61779-591-6_7","title":"DNA Barcoding Birds: From Field Collection to Data Analysis","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"","keywords":"DNA barcoding; Biology; Barcode; Mitochondrial DNA; Primer (cosmetics); DNA sequencing; Pseudogene; Evolutionary biology; Computational biology; DNA; Genetics; Gene; Genome; Computer science","score_opus":0.073409964051733,"score_gpt":0.43990848776728914,"score_spread":0.36649852371555613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419226475","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09254166,0.0004941452,0.9051254,0.00047702788,0.0004949666,0.00015911856,0.000043841537,0.000016604547,0.0006472532],"genre_scores_gemma":[0.4460059,0.000050278806,0.55133253,0.0011049559,0.00014553637,0.000047943955,0.0010350861,0.000017675791,0.00026005757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979015,0.00082825276,0.0003368007,0.000575723,0.00006672415,0.00029099447],"domain_scores_gemma":[0.9984317,0.000097698554,0.000092212525,0.0012170423,0.00005766102,0.00010368994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014230552,0.0001363542,0.00021475994,0.00030996726,0.00006644733,0.000023077253,0.00050615985,0.0002343179,0.00015695668],"category_scores_gemma":[0.0012005883,0.00014242037,0.0000876297,0.000843466,0.000037842794,0.0000064027668,0.00031500298,0.000103789964,0.000031283496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025162597,0.0000534651,0.013369475,0.0000021244066,0.00018436633,2.9174782e-7,0.000067658904,0.000018646459,0.9802181,0.0006677301,0.0011319568,0.004261019],"study_design_scores_gemma":[0.0001728486,0.000055036395,0.0049680816,0.000002740803,0.000109921944,0.0000014880404,0.00007843944,0.0004626984,0.9377151,0.00019170392,0.056040753,0.00020116271],"about_ca_topic_score_codex":0.00014775312,"about_ca_topic_score_gemma":0.00009669294,"teacher_disagreement_score":0.35379285,"about_ca_system_score_codex":0.000018128738,"about_ca_system_score_gemma":0.000028126698,"threshold_uncertainty_score":0.5807734},"labels":[],"label_agreement":null},{"id":"W2419239545","doi":"10.1007/978-1-4939-1743-3_2","title":"RT-PCR and Real-Time RT-PCR Methods for the Detection of Potato Virus Y in Potato Leaves and Tubers","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; 123 Certification (Canada)","funders":"","keywords":"Potato virus Y; Biology; Virology; Virus; Complementary DNA; Reverse transcription polymerase chain reaction; RNA extraction; Real-time polymerase chain reaction; Reverse transcriptase; RNA; Potyviridae; Titer; Potyvirus; Plant virus; Gene; Messenger RNA; Genetics","score_opus":0.03821590222059573,"score_gpt":0.3880113510833561,"score_spread":0.34979544886276037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419239545","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8392472,0.0034694136,0.15528817,0.00088257034,0.00009429317,0.00071048323,0.00007258461,0.00002609724,0.00020916086],"genre_scores_gemma":[0.12856673,0.004778219,0.8657457,0.00040568344,0.000089630266,0.0002802761,0.000027469006,0.000006965674,0.00009928935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960937,0.0028114012,0.00029029988,0.00038402446,0.00006532376,0.00035525337],"domain_scores_gemma":[0.99480945,0.004918067,0.00008891131,0.000083822604,0.000046040055,0.000053715532],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042832876,0.0001619785,0.0003956326,0.00006090693,0.00011206744,0.000017652224,0.00019920776,0.00016219907,0.000009103551],"category_scores_gemma":[0.0021102258,0.00006340387,0.000062392995,0.00030925972,0.00037607897,0.000030033523,0.00020161411,0.00016022642,6.996863e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063516185,0.000012398335,0.0006063682,0.00000775555,0.000019123272,8.368071e-7,0.000065755485,0.0000022917618,0.6965312,0.00019709342,0.000004342544,0.30248937],"study_design_scores_gemma":[0.0004483008,0.0007486208,0.038150273,0.000021013062,0.000025707093,0.000016144117,0.00023874798,0.0028863759,0.9338004,0.0142028015,0.009216781,0.0002448079],"about_ca_topic_score_codex":0.0016264217,"about_ca_topic_score_gemma":0.0009257666,"teacher_disagreement_score":0.7106805,"about_ca_system_score_codex":0.000018035003,"about_ca_system_score_gemma":0.0000057958146,"threshold_uncertainty_score":0.2585535},"labels":[],"label_agreement":null},{"id":"W2419265830","doi":"10.1007/978-1-59745-522-0_27","title":"Profiling DNA Methylation from Small Amounts of Genomic DNA Starting Material: Efficient Sodium Bisulfite Conversion and Subsequent Whole-Genome Amplification","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"Sodium bisulfite; Bisulfite sequencing; DNA methylation; Bisulfite; Methylated DNA immunoprecipitation; Illumina Methylation Assay; genomic DNA; DNA; Molecular biology; Biology; Primer (cosmetics); Epigenomics; Methylation; Computational biology; Chemistry; Genetics; Gene; Gene expression","score_opus":0.03023264474905739,"score_gpt":0.31831203311016837,"score_spread":0.28807938836111097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419265830","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6675191,0.0012321523,0.33069435,0.00002862938,0.00014623978,0.0002756142,0.00007370698,0.000007871073,0.000022374797],"genre_scores_gemma":[0.7576384,0.00026702706,0.24084523,0.00004620158,0.00005553937,0.000023836044,0.0010865286,0.000027977085,0.000009228957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974983,0.0009232379,0.00059924,0.0006047919,0.000086746666,0.00028769358],"domain_scores_gemma":[0.9990075,0.00006950884,0.00034591567,0.0003873062,0.000119191645,0.00007056104],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012003257,0.00021886302,0.0003285127,0.00016874002,0.0000798,0.00001269743,0.00016749563,0.00032034703,0.000009675303],"category_scores_gemma":[0.00020808402,0.0002259693,0.00007702265,0.00013136335,0.00018930953,0.0000033883564,0.00017473947,0.00010497311,0.0000022526133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009989859,0.000043572723,0.010427128,0.000024011182,0.000032089418,0.0000027700044,0.0001253026,0.0007727931,0.9869872,0.000083529034,2.8821677e-7,0.0014014194],"study_design_scores_gemma":[0.0005412208,0.00017552344,0.022660306,0.000009581719,0.000024389892,0.0000020385494,0.000046386205,0.0009984201,0.97416383,0.000758987,0.00039895906,0.00022034049],"about_ca_topic_score_codex":0.00012681041,"about_ca_topic_score_gemma":0.0000116581405,"teacher_disagreement_score":0.090119354,"about_ca_system_score_codex":0.000044919936,"about_ca_system_score_gemma":0.00006524295,"threshold_uncertainty_score":0.92147607},"labels":[],"label_agreement":null},{"id":"W2419281849","doi":"10.1007/978-1-4939-3179-8_38","title":"Two-Dimensional Crystallization of the Ca2+-ATPase for Electron Crystallography","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion Transport and Channel Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Phospholamban; SERCA; Crystallization; Endoplasmic reticulum; Crystallography; Electron crystallography; Biophysics; Chemistry; ATPase; Membrane; Calcium ATPase; Biochemistry; Electron diffraction; Biology; Physics; Enzyme; Diffraction","score_opus":0.018711270630992035,"score_gpt":0.34813020691235746,"score_spread":0.3294189362813654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419281849","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.229117,0.0009782319,0.7691942,0.00009135951,0.00021576787,0.00026837253,0.000010809377,0.0000066117886,0.00011767276],"genre_scores_gemma":[0.7376024,0.000017473578,0.2615443,0.0001872963,0.00009374895,0.00006773679,0.00037442902,0.000024958612,0.00008765359],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881005,0.00039107187,0.00025270434,0.0002737419,0.000072416195,0.00020003569],"domain_scores_gemma":[0.9994725,0.000031631465,0.000082995575,0.00023701105,0.00013614392,0.000039711686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007505916,0.00012253597,0.00015227355,0.00009016971,0.000027913593,0.0000044034573,0.00015906479,0.00018549275,0.0000036014637],"category_scores_gemma":[0.0001334419,0.00009635966,0.00015208412,0.00023891764,0.00011425911,0.000002689729,0.00003387934,0.00006150541,8.0317655e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011659575,0.00003331488,0.0017561661,0.000012929191,0.00002858406,8.023018e-7,0.000020597532,0.004463489,0.98982567,0.0026856947,0.000054998098,0.0010011415],"study_design_scores_gemma":[0.00087925006,0.00030210236,0.00043888288,0.0000128768825,0.000021533599,0.000009040777,0.000019100517,0.0011855304,0.97775257,0.008196759,0.011038049,0.00014432904],"about_ca_topic_score_codex":0.000020068292,"about_ca_topic_score_gemma":0.00002809679,"teacher_disagreement_score":0.50848544,"about_ca_system_score_codex":0.000014653183,"about_ca_system_score_gemma":0.00011167674,"threshold_uncertainty_score":0.3929433},"labels":[],"label_agreement":null},{"id":"W2419319820","doi":"10.1007/978-1-60327-058-8_34","title":"High Throughput Crystallography at SGC Toronto: an Overview","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Wellcome Trust","keywords":"Structural genomics; Context (archaeology); Computational biology; Genomics; Relevance (law); Data science; Engineering; Computer science; Genome; Protein structure; Biology; Gene; Political science; Genetics; Biochemistry","score_opus":0.07492957885614879,"score_gpt":0.45495988951532446,"score_spread":0.3800303106591757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419319820","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000017551409,0.893768,0.10290794,0.0000047502585,0.0019241297,0.0004674134,0.000051999014,0.00008119535,0.00077702105],"genre_scores_gemma":[2.7635494e-7,0.6071615,0.39221537,0.00015246382,0.0001376282,0.00008609636,0.00016267638,0.00004293536,0.000041021583],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99230665,0.0050231675,0.000840493,0.0011208819,0.00013884535,0.00056997046],"domain_scores_gemma":[0.9981213,0.00025372085,0.00041846978,0.0010534103,0.000047421177,0.00010565272],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0010618586,0.00060958846,0.0021371646,0.00015491364,0.00011196038,0.00002373997,0.00067017175,0.0010387062,0.001112682],"category_scores_gemma":[0.00015379536,0.00046885596,0.000571331,0.0003521646,0.00027486793,0.00009505826,0.00033725786,0.0003367325,0.00003322122],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001440547,0.000054861026,0.0000047521744,0.0019300429,0.00007864154,0.00009769056,0.00006245126,0.0000036324113,0.058018427,0.009769149,0.0002473003,0.9297187],"study_design_scores_gemma":[0.00015350113,0.00021695161,0.0000044097064,0.0005050664,0.00014824797,0.00022505014,0.0000041788167,7.6705845e-7,0.00184827,0.0046240473,0.9917509,0.0005185895],"about_ca_topic_score_codex":0.0006220791,"about_ca_topic_score_gemma":0.00034298273,"teacher_disagreement_score":0.9915036,"about_ca_system_score_codex":0.0002849433,"about_ca_system_score_gemma":0.00010663365,"threshold_uncertainty_score":0.99980044},"labels":[],"label_agreement":null},{"id":"W2419374772","doi":"10.1007/978-1-59745-530-5_2","title":"Observational Study Design","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Promotion and Cardiovascular Prevention","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Observational study; Outcome (game theory); Incidence (geometry); Odds; Similarity (geometry); Cohort study; Computer science; Statistics; Mathematics; Logistic regression; Artificial intelligence","score_opus":0.49767320549883737,"score_gpt":0.616974573651236,"score_spread":0.11930136815239861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419374772","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[5.619164e-7,0.49325624,0.5045355,0.000010974039,0.00018595348,0.0017895263,0.0000011396465,0.000021080086,0.00019899978],"genre_scores_gemma":[1.0706309e-7,0.53096753,0.46836028,0.000140878,0.00006506927,0.00023030723,0.00008260915,0.000029401326,0.0001238433],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9758191,0.02206341,0.0009998307,0.00057993503,0.00017749242,0.00036023906],"domain_scores_gemma":[0.99858975,0.00042669178,0.00020503742,0.00057394453,0.00008868509,0.00011589577],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.024200486,0.00030984782,0.0020439804,0.00053172786,0.000032691718,0.000005657934,0.00015577818,0.0006973729,0.000114329385],"category_scores_gemma":[0.00096640765,0.0002552947,0.00075252674,0.0006760942,0.000050311264,0.00001159583,0.000077808334,0.00074442214,0.000043559718],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000040358473,0.00024464834,0.000037910144,0.002351147,0.0003124782,0.00016776391,0.000017142516,7.0756016e-7,0.000024136543,0.00022103202,0.000009781987,0.9966092],"study_design_scores_gemma":[0.0007820584,0.0004864497,0.00016314241,0.0017436869,0.00089556794,0.00020340277,0.000013823323,0.0000079938245,0.000015298065,0.0005861486,0.99486774,0.0002347093],"about_ca_topic_score_codex":0.00000981387,"about_ca_topic_score_gemma":9.601551e-7,"teacher_disagreement_score":0.9963745,"about_ca_system_score_codex":0.00020498138,"about_ca_system_score_gemma":0.0004924756,"threshold_uncertainty_score":0.9999899},"labels":[],"label_agreement":null},{"id":"W2419379176","doi":"10.1007/978-1-61779-160-4_24","title":"Disrupting Protein Complexes Using Tat-Tagged Peptide Mimics","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"Protein–protein interaction; Peptide; Signal transduction; Biology; Transduction (biophysics); Cell biology; Protein domain; Chemistry; Biochemistry; Computational biology","score_opus":0.06950998508627002,"score_gpt":0.396383500420196,"score_spread":0.32687351533392595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419379176","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5362482,0.0004385476,0.46219155,0.000012233567,0.000101664016,0.00018023052,0.000005145628,0.000015016707,0.0008074274],"genre_scores_gemma":[0.28231835,0.000024873889,0.7170963,0.00029435824,0.000061031307,0.00003598554,0.000028687577,0.00004080916,0.00009954677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99760276,0.00090928725,0.0004012567,0.0005678996,0.000057323952,0.00046149365],"domain_scores_gemma":[0.99921405,0.000020236732,0.00014338185,0.00047118374,0.00007824771,0.00007290082],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00082469167,0.00025253024,0.00029940033,0.00012717012,0.00007020733,0.000012865751,0.00037940848,0.0003018661,0.000041112795],"category_scores_gemma":[0.00029517946,0.0002461422,0.00014358968,0.00015510933,0.00019970199,0.000004156728,0.00026648442,0.00020040864,0.0000088746865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007972669,0.00005771081,0.003252899,0.000013677024,0.000047484224,0.000022216014,0.00010762624,0.000027036816,0.9918867,0.00080174237,0.000012273176,0.003690961],"study_design_scores_gemma":[0.00034931282,0.00033411587,0.0004018434,0.000028598863,0.000016635382,0.000035062272,0.00014164514,0.00037762034,0.99311006,0.0033013814,0.0015792015,0.00032451432],"about_ca_topic_score_codex":0.00019430264,"about_ca_topic_score_gemma":0.000046928963,"teacher_disagreement_score":0.2549048,"about_ca_system_score_codex":0.000022037704,"about_ca_system_score_gemma":0.000059972415,"threshold_uncertainty_score":0.9999991},"labels":[],"label_agreement":null},{"id":"W2419417528","doi":"10.1007/978-1-60761-756-3_11","title":"Examining Ubiquitinated Protein Aggregates in Tissue Sections","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Ubiquitin; Cell biology; Biophysics; Chemistry; Materials science; Biology; Biochemistry","score_opus":0.015387402256436795,"score_gpt":0.3683133372873501,"score_spread":0.3529259350309133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419417528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90881765,0.00090288,0.086984515,0.000093877345,0.0002356747,0.00033404675,0.000010784922,0.000019001222,0.0026015472],"genre_scores_gemma":[0.72524023,0.000036989797,0.27398953,0.00014791032,0.000064266234,0.00019184253,0.00008314045,0.000026996397,0.00021910787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99809647,0.0006116061,0.0003169371,0.0005340031,0.000050970364,0.00038999182],"domain_scores_gemma":[0.99931574,0.000044451856,0.00008379361,0.00041697078,0.000046099263,0.00009296274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064197066,0.00019903835,0.000229439,0.0001741979,0.000038851824,0.00001589994,0.00023427977,0.00036808036,0.000060557737],"category_scores_gemma":[0.0010108085,0.00019567893,0.000052828498,0.00024834168,0.00017152318,0.0000029023086,0.00015614819,0.0003536858,0.0000063571433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030464504,0.00007272798,0.008216193,0.000012511172,0.000010016022,0.000044631008,0.000019706049,0.00004695874,0.9767113,0.0011063417,0.000006517862,0.013722631],"study_design_scores_gemma":[0.0006666716,0.00020297413,0.0018169974,0.000020544114,0.000006243364,0.000026586313,0.000052725416,0.00011424349,0.98385054,0.0024516368,0.010544213,0.00024663386],"about_ca_topic_score_codex":0.00011687323,"about_ca_topic_score_gemma":0.00027071685,"teacher_disagreement_score":0.18700501,"about_ca_system_score_codex":0.0000113307715,"about_ca_system_score_gemma":0.00006706637,"threshold_uncertainty_score":0.7979555},"labels":[],"label_agreement":null},{"id":"W2419436067","doi":"10.1007/978-1-59745-490-2_11","title":"Enrichment and Disassembly of Ectoplasmic Specializations in the Rat Testis","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC; University of British Columbia","funders":"","keywords":"Sertoli cell; Gelsolin; Cell biology; Spermatogenesis; Endoplasmic reticulum; Blood–testis barrier; Biology; Epithelium; Seminiferous tubule; Ultrastructure; Cell junction; Chemistry; Actin; Cell; Anatomy; Endocrinology; Biochemistry; Genetics","score_opus":0.024233046516287972,"score_gpt":0.3950134081812099,"score_spread":0.3707803616649219,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419436067","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37994763,0.00047794095,0.61773,0.00021332434,0.00011116761,0.00018905179,5.1108566e-7,0.000005112576,0.0013252558],"genre_scores_gemma":[0.63844085,0.000048649104,0.3609657,0.000458359,0.000036861737,0.000011610389,0.000012317502,0.000007043963,0.000018600691],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990744,0.00035115815,0.0002204012,0.00014988807,0.000052772157,0.00015136064],"domain_scores_gemma":[0.999264,0.0004868047,0.00004251373,0.00015945158,0.000024237543,0.000022974134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014968979,0.00007095395,0.00017466271,0.00016348819,0.000015411157,0.0000024643243,0.000045525343,0.00008392378,0.0000140793045],"category_scores_gemma":[0.0010613818,0.0000489285,0.000028144914,0.0003681014,0.00008910506,0.0000073973265,0.000024499082,0.00009310882,7.250194e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033049804,0.0001045981,0.20756939,0.000015666163,0.000010285791,0.00006625665,0.00023916937,0.000009386208,0.76171577,0.012594006,0.000013030249,0.017629415],"study_design_scores_gemma":[0.0023869146,0.000811965,0.5897235,0.000074819334,0.000119005934,0.00039283335,0.0005683255,0.00034002773,0.38633835,0.014964407,0.004076664,0.00020312202],"about_ca_topic_score_codex":0.000060890852,"about_ca_topic_score_gemma":0.000059555667,"teacher_disagreement_score":0.38215417,"about_ca_system_score_codex":0.000024866025,"about_ca_system_score_gemma":0.000021723727,"threshold_uncertainty_score":0.19952464},"labels":[],"label_agreement":null},{"id":"W2419437825","doi":"10.1007/978-1-59745-188-8_16","title":"Quantitative Protein Profiling by Mass Spectrometry Using Isotope-Coded Affinity Tags","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Chemistry; Mass spectrometry; Proteomics; Quantitative proteomics; Tandem mass spectrometry; Tandem mass tag; Chromatography; Computational biology; Biology; Biochemistry","score_opus":0.048176009361804224,"score_gpt":0.41716663520929637,"score_spread":0.36899062584749215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419437825","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26148853,0.00028110534,0.73653173,0.000048212652,0.000011536881,0.0003159875,0.000028060029,0.0000819313,0.0012129276],"genre_scores_gemma":[0.017759902,0.000036900165,0.9816177,0.00006794593,0.000017259372,0.000312579,0.00004093659,0.000036528567,0.00011024932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984255,0.0002839285,0.0003633944,0.0004980708,0.00006589543,0.000363249],"domain_scores_gemma":[0.9991756,0.000123525,0.00018089314,0.00041376025,0.0000521746,0.000054052103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004852074,0.00020873018,0.00033347384,0.000103929626,0.00011373799,0.000007298429,0.00029235226,0.000276248,0.000074610376],"category_scores_gemma":[0.00036567487,0.00021530357,0.000084657084,0.00036633556,0.00020429342,0.000035582543,0.000106615655,0.00047371374,0.0000031309244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026378311,0.000052691365,0.00062509434,0.00002060474,0.000015026223,0.000013122141,0.000026085218,0.00002905781,0.9857088,0.013149251,0.0000032948174,0.0003305955],"study_design_scores_gemma":[0.00021800525,0.00004579134,0.0000023047276,0.000016668935,0.0000060107977,0.00001671158,0.000040004466,0.0017371386,0.946864,0.050445747,0.000376651,0.00023097919],"about_ca_topic_score_codex":0.000050799154,"about_ca_topic_score_gemma":7.5930865e-7,"teacher_disagreement_score":0.24508598,"about_ca_system_score_codex":0.000117108866,"about_ca_system_score_gemma":0.000053437165,"threshold_uncertainty_score":0.8779825},"labels":[],"label_agreement":null},{"id":"W2419448304","doi":"10.1007/978-1-60761-738-9_9","title":"Analysis of Nuclear Export Using Photoactivatable GFP Fusion Proteins and Interspecies Heterokaryons","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Heterokaryon; Nucleus; Green fluorescent protein; Fusion protein; Nuclear transport; Cell biology; Confocal microscopy; Nuclear protein; Chemistry; Transcription factor; Nuclear localization sequence; Cell nucleus; Fusion; Biophysics; Computational biology; Biology; Biochemistry; Gene; Recombinant DNA","score_opus":0.015820494400809872,"score_gpt":0.3877991545845407,"score_spread":0.3719786601837308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419448304","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52874315,0.00012413757,0.47083417,0.000011266863,0.000042173335,0.00014991492,0.000011081677,0.0000091843385,0.000074914475],"genre_scores_gemma":[0.22683924,0.00005901956,0.77292883,0.00008531492,0.000013007155,0.000014992784,0.000029195733,0.000020417143,0.000009993996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986637,0.00026792413,0.00030211924,0.00047003658,0.000048431524,0.00024774187],"domain_scores_gemma":[0.99921983,0.00002340965,0.00014906314,0.0004955354,0.0000637577,0.000048396967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005189943,0.00017484464,0.0003644383,0.00031995014,0.00004089294,0.000008769439,0.00022487284,0.0002987391,0.000029889618],"category_scores_gemma":[0.0002794286,0.00016923436,0.0001158319,0.0003736499,0.00037862104,0.0000055518244,0.0003370204,0.00023063642,1.3788112e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050470306,0.000047600563,0.010175154,0.000008551913,0.00011547151,0.0000033489434,0.00005561235,0.000011267019,0.98741364,0.0002788298,0.0000028519403,0.0018372093],"study_design_scores_gemma":[0.00014968659,0.00016914861,0.0012115579,0.000009929714,0.00007248023,0.000010201266,0.0000655138,0.00054585893,0.9959622,0.00037457966,0.0012600315,0.00016880086],"about_ca_topic_score_codex":0.00010376979,"about_ca_topic_score_gemma":0.000051105846,"teacher_disagreement_score":0.30209464,"about_ca_system_score_codex":0.000013847163,"about_ca_system_score_gemma":0.00002332531,"threshold_uncertainty_score":0.6901177},"labels":[],"label_agreement":null},{"id":"W2419452174","doi":"10.1007/978-1-4939-1568-2_17","title":"Protein Tyrosine Phosphatases in Mast Cell Signaling","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Child and Family Research Institute","funders":"","keywords":"Protein tyrosine phosphatase; Mast cell; Cell biology; Immune system; Biology; Effector; Signal transduction; Immunoglobulin E; Receptor tyrosine kinase; Tyrosine phosphorylation; Receptor; Phosphorylation; Immunology; Antibody; Biochemistry","score_opus":0.02947119162206218,"score_gpt":0.3964315900486149,"score_spread":0.3669603984265527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419452174","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001941187,0.80043954,0.19738966,0.000012785763,0.00019376681,0.001602623,0.00018471995,0.000021871843,0.00013561068],"genre_scores_gemma":[0.00001694881,0.63011086,0.36650082,0.00014256763,0.00014279212,0.0009019969,0.0019424903,0.00013974356,0.00010177662],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99196714,0.0038856978,0.0014262379,0.0016228313,0.00013979443,0.0009583045],"domain_scores_gemma":[0.9976282,0.00018123453,0.00063659344,0.0013462158,0.00006385758,0.0001438907],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0025145195,0.00097473315,0.0023933104,0.0004842238,0.000047909994,0.000038316404,0.0011128206,0.001395489,0.0000478287],"category_scores_gemma":[0.0012494659,0.0009093594,0.0005548506,0.00067275006,0.00026650392,0.0000044654817,0.0007523851,0.0007711229,0.000031381584],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006410145,0.0002374399,0.000029931673,0.0066845557,0.000099377714,0.00013843656,0.0000068072945,0.00003257097,0.1935341,0.0026195308,0.00013224572,0.7964209],"study_design_scores_gemma":[0.00047641978,0.0002663657,5.050074e-7,0.0019239632,0.00008150472,0.000023106004,0.0000026535006,0.0000051563147,0.37708756,0.00051995803,0.6189224,0.0006903674],"about_ca_topic_score_codex":0.000099593846,"about_ca_topic_score_gemma":0.000024755203,"teacher_disagreement_score":0.79573053,"about_ca_system_score_codex":0.000100364065,"about_ca_system_score_gemma":0.0003438844,"threshold_uncertainty_score":0.99990094},"labels":[],"label_agreement":null},{"id":"W2419565934","doi":"10.1007/978-1-61779-934-1_3","title":"LC-MS/MS Techniques for High-Volume Screening of Drugs of Abuse and Target Drug Quantitation in Urine/Blood Matrices","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pesticide Residue Analysis and Safety","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Health; Saskatchewan Disease Control Laboratory","funders":"","keywords":"Chromatography; Drugs of abuse; Forensic toxicology; Urine; Sample preparation; Solid phase extraction; Drug; Clinical toxicology; Electrospray ionization; Pharmacokinetics; Chemistry; Mass spectrometry; Pharmacology; Medicine; Toxicology; Biology","score_opus":0.018880998833712925,"score_gpt":0.33671066224220964,"score_spread":0.3178296634084967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419565934","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9034385,0.00202477,0.09411956,0.00013772934,0.000018746006,0.00017772899,0.000019682586,0.000009765929,0.00005353148],"genre_scores_gemma":[0.54117376,0.00016856914,0.4585675,0.000022927075,0.00001841374,0.000016742939,0.000025523821,8.709581e-7,0.000005709274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985287,0.0006073631,0.0003955036,0.00018986023,0.000057745634,0.00022083338],"domain_scores_gemma":[0.9991289,0.00053131033,0.00019733621,0.000056032568,0.000052563963,0.000033858585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018966453,0.000102612925,0.0003661214,0.000077209435,0.000024135532,0.00000457621,0.00013624338,0.00012036882,0.000021297275],"category_scores_gemma":[0.00023858219,0.000048565023,0.00007417679,0.00035770435,0.0000830175,0.000055081648,0.000048130467,0.00007211811,1.3972553e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027990593,0.00007899729,0.13410723,0.000023763083,0.000020473199,5.799672e-7,0.00012426577,0.000010129788,0.8364918,0.0030205036,0.0000029528874,0.02609131],"study_design_scores_gemma":[0.00032502215,0.00034845597,0.32827523,0.00005696432,0.00007286808,0.0000026177759,0.00027457863,0.00044832053,0.658502,0.010523764,0.00093727885,0.00023289217],"about_ca_topic_score_codex":0.0014723999,"about_ca_topic_score_gemma":0.00013791586,"teacher_disagreement_score":0.36444792,"about_ca_system_score_codex":0.000005488035,"about_ca_system_score_gemma":0.0000034832713,"threshold_uncertainty_score":0.2225838},"labels":[],"label_agreement":null},{"id":"W2419579544","doi":"10.1007/978-1-4939-1280-3_17","title":"Quantitative Measurement of Proteolytic Rates with Quantum Dot-Peptide Substrate Conjugates and Förster Resonance Energy Transfer","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Quantum Dots Synthesis And Properties","field":"Materials Science","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Förster resonance energy transfer; Proteases; Substrate (aquarium); Peptide; Quantum dot; Conjugate; Nanotechnology; Bioanalysis; Proteolytic enzymes; Fluorescence; Chemistry; Materials science; Biophysics; Combinatorial chemistry; Enzyme; Biochemistry; Biology; Physics","score_opus":0.04282044086980287,"score_gpt":0.3250792466934407,"score_spread":0.2822588058236378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419579544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58186275,0.0032983674,0.41427484,0.00013521778,0.000052580832,0.00016954463,0.000004404808,0.000013735981,0.00018858981],"genre_scores_gemma":[0.76478356,0.000093913935,0.23488341,0.00011686348,0.000007625625,0.00008021257,0.000001050172,0.000018269127,0.000015101007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99625003,0.002441059,0.00041608285,0.0004366357,0.0001442075,0.0003119765],"domain_scores_gemma":[0.99913377,0.00033147587,0.000092316484,0.00025741558,0.0001378325,0.00004719249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003155815,0.00021290398,0.0004967619,0.000093980336,0.000046564877,0.00002446261,0.00018550843,0.0001051148,0.000040519095],"category_scores_gemma":[0.00034622275,0.0001401003,0.00004036806,0.00010082042,0.00057589216,0.000056266486,0.000034267476,0.00008699837,0.0000026875339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003209385,0.00003261262,0.00077287725,0.000056321223,0.000014225145,0.0000033609788,0.00024038578,0.00002174573,0.93575776,0.060744405,0.0000015495187,0.0020338455],"study_design_scores_gemma":[0.000436497,0.0009499305,0.0006895903,0.00013851836,0.000018944074,0.0000059612003,0.00007781756,0.0010984297,0.98606855,0.00944419,0.0008637939,0.00020779126],"about_ca_topic_score_codex":0.00039013763,"about_ca_topic_score_gemma":0.00015402453,"teacher_disagreement_score":0.18292083,"about_ca_system_score_codex":0.000016653006,"about_ca_system_score_gemma":0.000046571728,"threshold_uncertainty_score":0.5713124},"labels":[],"label_agreement":null},{"id":"W2419651654","doi":"10.1007/978-1-61779-252-6_12","title":"Variations on the Single-Molecule Assay for Microtubule-Associated Proteins and Kinesins","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Kinesin; Microtubule; Motility; Cytoskeleton; Cell biology; Function (biology); Biology; Biophysics; Genetics; Cell","score_opus":0.035010359459816745,"score_gpt":0.3293098365456554,"score_spread":0.29429947708583865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2419651654","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10491715,0.00029914847,0.89206165,0.00038017106,0.0001362192,0.00095040223,0.000050896215,0.00001590169,0.0011884308],"genre_scores_gemma":[0.23571756,0.00008657914,0.7602715,0.0025450357,0.000077601755,0.0006774712,0.00022182072,0.000077745346,0.0003246993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977492,0.0010203123,0.0002981188,0.0005094318,0.000044375956,0.00037857896],"domain_scores_gemma":[0.99913234,0.0001458458,0.00013330672,0.000442619,0.000092242284,0.000053642267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013101653,0.00023165601,0.0002341969,0.00009418981,0.00010875211,0.000019022582,0.00027851184,0.00037071796,0.000012461855],"category_scores_gemma":[0.0012796059,0.0001831789,0.00011872645,0.00015746341,0.00016641874,0.0000023714492,0.00013877214,0.00015950428,0.0000017930887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006168973,0.00020028051,0.00036731077,0.000007634616,0.00007563123,0.0000021316034,0.00007943942,0.0000024582903,0.9816296,0.015007959,0.000084653075,0.0024811944],"study_design_scores_gemma":[0.0006789676,0.00082152593,0.0005474619,0.000017341295,0.000037615842,0.000009767843,0.000028240662,0.00020470361,0.98336375,0.0064397966,0.0075690052,0.00028179638],"about_ca_topic_score_codex":0.000057548845,"about_ca_topic_score_gemma":0.000112174355,"teacher_disagreement_score":0.13179019,"about_ca_system_score_codex":0.000025863337,"about_ca_system_score_gemma":0.000049639053,"threshold_uncertainty_score":0.74698186},"labels":[],"label_agreement":null},{"id":"W2420069009","doi":"10.1007/978-1-4939-2428-8_22","title":"Clinical Genetic Research 3: Genetics ELSI (Ethical, Legal, and Social Issues) Research","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ethics in Clinical Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Engineering ethics; Context (archaeology); Expansive; Ethical issues; Bioethics; Research program; Social research; Political science; Research ethics; Mandate; Sociology; Social science; Engineering; Epistemology; Law; Biology","score_opus":0.8124758827528349,"score_gpt":0.7841653095961263,"score_spread":0.028310573156708596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2420069009","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57092625,0.026392872,0.2515743,0.13082938,0.0011251372,0.0029487005,0.00001262256,0.00012893358,0.016061833],"genre_scores_gemma":[0.03928406,0.004164086,0.9514259,0.0025983208,0.00076637696,0.00010904809,0.000009473245,0.00008033828,0.0015623617],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9544469,0.038850285,0.0014726417,0.0015352519,0.0020557218,0.0016391895],"domain_scores_gemma":[0.9655448,0.029234411,0.00008940925,0.0012415535,0.0031250895,0.0007647322],"candidate_categories":["metaresearch","sts","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.16526082,0.0002352611,0.00093884673,0.0007677053,0.0002370603,0.000078450714,0.00078518916,0.0037160746,0.00006418674],"category_scores_gemma":[0.13095883,0.00020907845,0.00016357555,0.001290266,0.0070310584,0.00002005456,0.0018759747,0.018256733,0.00009417213],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002050513,0.0014828127,0.121104024,0.00065899565,0.00026183788,0.0025981606,0.0016673874,0.000007499451,0.25955564,0.35756284,0.006515434,0.24653487],"study_design_scores_gemma":[0.0038287302,0.0054664575,0.018212061,0.00017315628,0.000040651932,0.00012473518,0.0007253774,0.00085904973,0.012731415,0.8271532,0.13028704,0.0003981223],"about_ca_topic_score_codex":0.00042462064,"about_ca_topic_score_gemma":0.000114121416,"teacher_disagreement_score":0.69985163,"about_ca_system_score_codex":0.00020932953,"about_ca_system_score_gemma":0.0019699375,"threshold_uncertainty_score":0.9975773},"labels":[],"label_agreement":null},{"id":"W2420215847","doi":"10.1007/978-1-60327-565-1_3","title":"Determination of Bacteriophage Genome Size by Pulsed-Field Gel Electrophoresis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Pulsed-field gel electrophoresis; Gel electrophoresis; Agarose gel electrophoresis; Genome; DNA; Bacteriophage; Agarose; Biology; Molecular biology; Electrophoresis; Genome size; Gel electrophoresis of nucleic acids; genomic DNA; Genetics; Gene; Escherichia coli; Genotype","score_opus":0.00601448132181211,"score_gpt":0.3252409776981737,"score_spread":0.31922649637636163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2420215847","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42795962,0.00013027157,0.5694796,0.00028180776,0.000080318685,0.00013821031,0.000008467446,0.000012007443,0.0019097137],"genre_scores_gemma":[0.44372243,0.00006786868,0.5549678,0.0009546143,0.000009926786,0.000009443109,0.000011404919,0.000009085945,0.00024743358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988092,0.00036484576,0.00027038922,0.00027040672,0.000039748607,0.00024541878],"domain_scores_gemma":[0.99951035,0.000133497,0.00009982529,0.00021016531,0.0000073707297,0.000038817954],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00031631358,0.000120554556,0.00020381763,0.00004731002,0.000028540973,0.00000863768,0.000203135,0.00014479482,0.0013315951],"category_scores_gemma":[0.00019212111,0.00011730706,0.00007540474,0.00020071783,0.0000674839,0.000052060994,0.00006349978,0.00014928605,0.000016817245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020771888,0.000058952708,0.00014137158,0.0000016672012,0.0000031338386,0.0000058736473,0.000037743324,0.0000024510282,0.94295007,0.000022884946,0.000022710803,0.056732375],"study_design_scores_gemma":[0.000165519,0.00034112117,0.025151985,0.000003576342,0.000009286046,0.000012879396,0.000004875108,0.000051319872,0.96880186,0.0011792162,0.0041523753,0.00012597136],"about_ca_topic_score_codex":0.0001967355,"about_ca_topic_score_gemma":0.000022058473,"teacher_disagreement_score":0.056606404,"about_ca_system_score_codex":0.00007765806,"about_ca_system_score_gemma":0.000005386359,"threshold_uncertainty_score":0.99958134},"labels":[],"label_agreement":null},{"id":"W2420289317","doi":"10.1007/978-1-4939-0366-5_11","title":"Prediction of Intrinsic Disorder in Proteins Using MFDp2","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Intrinsically disordered proteins; Web server; Annotation; Computational biology; Computer science; Sequence (biology); Biology; Artificial intelligence; World Wide Web; Genetics; Biophysics; The Internet","score_opus":0.01437908103107618,"score_gpt":0.33641411611614513,"score_spread":0.322035035085069,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2420289317","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4118769,0.00030917264,0.5873092,0.000017688064,0.00008346888,0.00019455607,0.0000058144683,0.0000039447377,0.00019931042],"genre_scores_gemma":[0.44974133,0.00002810361,0.5499934,0.000088667526,0.00005125009,0.000028852468,0.000042764103,0.0000162811,0.000009381118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816346,0.00083596044,0.0003505588,0.0003571919,0.000049580103,0.00024322409],"domain_scores_gemma":[0.9994354,0.000023917315,0.00010939454,0.00035994462,0.000040681545,0.00003064647],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008420968,0.00014810693,0.00025777926,0.00016141747,0.00001664839,0.0000034802779,0.00017930815,0.00033201204,0.0000046154823],"category_scores_gemma":[0.0004884519,0.00014230127,0.0000669658,0.00021525654,0.00012861453,0.0000022678353,0.00014133002,0.0001541395,3.0786714e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004249414,0.000035214518,0.02934781,0.000020352269,0.0000129504815,0.000001363742,0.000018969333,0.0005519449,0.9466682,0.0019480651,7.4481505e-7,0.021351889],"study_design_scores_gemma":[0.0013114358,0.00057275506,0.009414443,0.000034022432,0.000015583619,0.000019856383,0.00002679869,0.0064291316,0.9619391,0.016562939,0.0034077205,0.00026622423],"about_ca_topic_score_codex":0.0001227622,"about_ca_topic_score_gemma":0.000075384385,"teacher_disagreement_score":0.037864435,"about_ca_system_score_codex":0.00001878349,"about_ca_system_score_gemma":0.0000438895,"threshold_uncertainty_score":0.58028775},"labels":[],"label_agreement":null},{"id":"W2421145636","doi":"10.1007/978-1-61779-201-4_7","title":"Transgene-Free Production of Pluripotent Stem Cells Using piggyBac Transposons","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Stem Cell Network","keywords":"Transgene; Induced pluripotent stem cell; Biology; Transposable element; Genetics; Cell biology; Embryonic stem cell; Genome; Gene","score_opus":0.06442434806314293,"score_gpt":0.36574025505921703,"score_spread":0.30131590699607413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2421145636","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47465461,0.0011100216,0.52305096,0.000039454622,0.00034054325,0.00039756633,0.00001926072,0.000010307294,0.0003772269],"genre_scores_gemma":[0.31662595,0.00032156205,0.68257546,0.000055732973,0.00006217921,0.000044579163,0.000023764396,0.000057357705,0.00023341179],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996497,0.0015405546,0.0005467474,0.0007434526,0.00014633156,0.00052593445],"domain_scores_gemma":[0.9986549,0.000024246732,0.00014361639,0.0009537144,0.00012342267,0.000100110155],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014692206,0.00026694266,0.0004003498,0.0002424883,0.000044661712,0.000004257131,0.00064093346,0.00039265916,0.000029505833],"category_scores_gemma":[0.00008081059,0.000261691,0.00022149654,0.00032605737,0.0003073851,0.0000045110583,0.00015954829,0.00022470593,0.0000023078464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020408409,0.00017147405,0.00087532366,0.000071120056,0.00008894835,0.000015365906,0.00016625674,0.00028975948,0.991774,0.00017010103,0.000011713458,0.0061618467],"study_design_scores_gemma":[0.00061500777,0.00040259236,0.00021166792,0.00002351801,0.00003723463,0.00002643997,0.00006610582,0.00014943635,0.99641,0.0007036169,0.0010991197,0.0002552459],"about_ca_topic_score_codex":0.0001053378,"about_ca_topic_score_gemma":0.000033795943,"teacher_disagreement_score":0.15952446,"about_ca_system_score_codex":0.00003314242,"about_ca_system_score_gemma":0.000112238915,"threshold_uncertainty_score":0.99998355},"labels":[],"label_agreement":null},{"id":"W2421283750","doi":"10.1007/978-1-61779-160-4_15","title":"Simultaneous Real-Time Imaging of Signal Oscillations Using Multiple Fluorescence-Based Reporters","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"SIGNAL (programming language); Fluorescence; Biological system; Chemistry; Physics; Computer science; Optics; Biology","score_opus":0.09078113946246656,"score_gpt":0.41619368047938077,"score_spread":0.3254125410169142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2421283750","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.383795,0.000022351875,0.6146402,0.000008116362,0.00009640868,0.0002269616,0.000013463211,0.000024814772,0.0011727366],"genre_scores_gemma":[0.51929367,0.0000059943786,0.48063263,0.000034244073,0.0000058819055,0.00000596917,0.000002120282,0.0000129096625,0.0000065612794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969567,0.0016135605,0.00041670637,0.00047377805,0.00014896631,0.00039027233],"domain_scores_gemma":[0.9982229,0.0010958452,0.00015221188,0.00036834422,0.00007841349,0.00008231596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094046304,0.00014138363,0.00025544094,0.00031256137,0.00006260694,0.000008239946,0.00032048914,0.00009702696,0.00015922824],"category_scores_gemma":[0.002907366,0.00013703942,0.00009231097,0.00046136783,0.0004425482,0.000022790053,0.00011050048,0.00016331293,0.0000039702018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005326238,0.000059474274,0.014014707,0.000007068904,0.0000030887095,0.00011442244,0.00012471841,0.0013837703,0.9790421,0.0000634556,5.2338845e-7,0.00513337],"study_design_scores_gemma":[0.00019853908,0.00005413695,0.00016408984,0.00000902991,0.000004737642,0.000013202995,0.000009575291,0.26910117,0.7296926,0.0006348902,0.000016927936,0.00010109638],"about_ca_topic_score_codex":0.0003512205,"about_ca_topic_score_gemma":0.0000032575847,"teacher_disagreement_score":0.2677174,"about_ca_system_score_codex":0.000054761225,"about_ca_system_score_gemma":0.00012405883,"threshold_uncertainty_score":0.55883056},"labels":[],"label_agreement":null},{"id":"W2421508000","doi":"10.1007/978-1-61779-818-4_15","title":"Improved Shoot Regeneration from Root Explants Using an Abscisic Acid-Containing Medium","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Abscisic acid; Explant culture; Shoot; Cytokinin; Regeneration (biology); Arabidopsis thaliana; Biology; Ecotype; Botany; Plant growth; Cell biology; In vitro; Auxin; Gene","score_opus":0.09197091534035323,"score_gpt":0.39799214760781954,"score_spread":0.3060212322674663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2421508000","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88251054,0.001157421,0.115349814,0.0001767821,0.0003780692,0.00024038773,0.000056911387,0.000045829303,0.00008421691],"genre_scores_gemma":[0.78498113,0.000016965148,0.21370676,0.0003137273,0.00034543558,0.000037028844,0.00058676716,0.0000038742196,0.000008283632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950647,0.0030144027,0.0003814858,0.00058081554,0.00012214479,0.00083646696],"domain_scores_gemma":[0.99905527,0.00036706557,0.00012549969,0.00018116647,0.000053781976,0.00021719861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024585237,0.00025225975,0.00038704427,0.00006510806,0.00013897006,0.00003547574,0.00048918516,0.00048570975,0.00015128405],"category_scores_gemma":[0.00047244612,0.0001209351,0.000089104346,0.0003357904,0.00012548757,0.00013561925,0.0002235106,0.00034973866,0.000009793258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060941646,0.000074117794,0.041267656,0.0000011229794,0.000021569049,0.000014440697,0.0000722736,0.0000057823813,0.9291799,0.00013463998,0.0000028703578,0.02916469],"study_design_scores_gemma":[0.00027347857,0.00030819958,0.01837666,0.000011220579,0.000016507778,0.000036750986,0.00015468591,0.0017593955,0.9765529,0.001591109,0.000577001,0.0003421108],"about_ca_topic_score_codex":0.0010406446,"about_ca_topic_score_gemma":0.0011631513,"teacher_disagreement_score":0.09835695,"about_ca_system_score_codex":0.00006611801,"about_ca_system_score_gemma":0.000026095911,"threshold_uncertainty_score":0.49315903},"labels":[],"label_agreement":null},{"id":"W2421656184","doi":"10.1007/978-1-61779-204-5_10","title":"Identification of the Myosin Heavy Polypeptide 9 as a Downstream Effector of the Proprotein Convertases in the Human Colon Carcinoma HT-29 Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Victoria Hospital; McGill University","funders":"","keywords":"Proprotein Convertases; Effector; Carcinogenesis; Metastasis; Cancer research; Colorectal cancer; Cancer; Cancer cell; Chemistry; Cell biology; Biology; Biochemistry; LDL receptor","score_opus":0.024256011881889302,"score_gpt":0.35517984041410755,"score_spread":0.33092382853221824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2421656184","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9945139,0.00009550964,0.0035567994,0.00047224548,0.000036194422,0.0008578579,0.000017418068,0.0000055215864,0.00044449596],"genre_scores_gemma":[0.9929788,0.0000023019118,0.006318825,0.0004992943,0.000010757692,0.00008686854,0.00000930008,0.000009122389,0.00008471358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996093,0.002901949,0.00048518923,0.00022486779,0.00013193059,0.00016306863],"domain_scores_gemma":[0.9988521,0.00014141452,0.00027827657,0.00064079434,0.00006428315,0.000023157865],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014834106,0.00012588358,0.0003369643,0.00013432714,0.000045206765,0.000003557751,0.0002645211,0.00013417142,0.00007792516],"category_scores_gemma":[0.00043728555,0.00006311042,0.00020514043,0.0005218726,0.0004404737,0.000011693567,0.00007334215,0.00023675109,0.0000034673058],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053114345,0.00021488097,0.014947876,0.000055371336,0.000028260221,0.000009459387,0.0006289984,0.0000012334082,0.98259115,0.0010595251,0.00001717982,0.00039292246],"study_design_scores_gemma":[0.0005530545,0.00018943606,0.04221918,0.00009181403,0.00010439979,0.000012234472,0.00024593825,0.000040664985,0.95530486,0.001151041,0.000027588887,0.000059782964],"about_ca_topic_score_codex":0.0016575223,"about_ca_topic_score_gemma":0.00014911889,"teacher_disagreement_score":0.027286312,"about_ca_system_score_codex":0.00003437014,"about_ca_system_score_gemma":0.00006472159,"threshold_uncertainty_score":0.25735682},"labels":[],"label_agreement":null},{"id":"W2421659172","doi":"10.1007/978-1-4939-3512-3_18","title":"Optogenetic Tools for Confined Stimulation in Deep Brain Structures","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Heart Institute; Université de Montréal; Polytechnique Montréal","funders":"","keywords":"Optogenetics; Neuroscience; Deep brain stimulation; Population; Computer science; Biology; Medicine","score_opus":0.09601345274562978,"score_gpt":0.48185946649184846,"score_spread":0.3858460137462187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2421659172","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29863846,0.00008184581,0.70017225,0.00026026779,0.00014219536,0.0004926134,0.000015078762,0.000011673526,0.0001856221],"genre_scores_gemma":[0.58402306,0.000029249673,0.4151917,0.0005202044,0.000024953171,0.00014328325,0.000005165993,0.000020442114,0.00004191091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970416,0.0016365756,0.00029111208,0.00050165004,0.00009308609,0.00043602078],"domain_scores_gemma":[0.99636626,0.003223926,0.00005128123,0.00027057377,0.000028806666,0.000059160568],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.00097068853,0.00013759054,0.00022551457,0.00027014606,0.00003084118,0.000022975433,0.00033730656,0.00018061837,0.00011501752],"category_scores_gemma":[0.008987295,0.00010137556,0.000060659488,0.0002789666,0.00016869647,0.000032508666,0.00009795393,0.00010235077,0.0000038143921],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008615545,0.000017807397,0.0011302304,0.0000056771737,0.0000017894621,0.000004298014,0.000037192058,0.00017329915,0.86820734,0.0054390286,0.0000032600005,0.12489393],"study_design_scores_gemma":[0.0011000945,0.00017567897,0.002647115,0.0000066135744,0.0000016147177,0.0000029725038,0.0000054841666,0.0019820288,0.94092035,0.051529355,0.0014923392,0.00013632754],"about_ca_topic_score_codex":0.0000102765225,"about_ca_topic_score_gemma":0.000023184235,"teacher_disagreement_score":0.28538463,"about_ca_system_score_codex":0.000057504927,"about_ca_system_score_gemma":0.0000463868,"threshold_uncertainty_score":0.99936044},"labels":[],"label_agreement":null},{"id":"W2421855932","doi":"10.1007/978-1-60761-103-5_19","title":"Electron Microscopy of Mammalian Chromosomes","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Electron microscope; Microscopy; Fluorescence microscope; Transmission electron microscopy; Staining; Immunostaining; Chemistry; Materials science; Biology; Pathology; Nanotechnology; Fluorescence; Optics; Physics; Medicine; Immunohistochemistry; Genetics","score_opus":0.02332367341789154,"score_gpt":0.4317100782759131,"score_spread":0.4083864048580216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2421855932","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009459833,0.88875717,0.10975494,0.00000853905,0.00024903665,0.00063956704,0.000034621284,0.00001703419,0.00044449815],"genre_scores_gemma":[0.0000028854906,0.6240775,0.3751301,0.000073323965,0.000070399314,0.000074030315,0.00031710527,0.00006596811,0.00018867526],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9946354,0.0025921469,0.0009852491,0.0010366905,0.00009415984,0.0006563303],"domain_scores_gemma":[0.9982069,0.00005980945,0.00044840138,0.0011338659,0.0000618511,0.0000891541],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013118831,0.0006421321,0.0020330038,0.00035119036,0.00002409474,0.000010043507,0.0008384958,0.0014846997,0.000024038227],"category_scores_gemma":[0.0003508047,0.0005913436,0.0007847855,0.0003939209,0.00017589623,0.0000015154607,0.00028095313,0.00044070912,0.000008463003],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011397083,0.00005799459,0.0000019139409,0.00092494313,0.000101608784,0.000015035832,0.0000035132834,8.2134045e-7,0.5494689,0.00063012226,0.000029689169,0.4487541],"study_design_scores_gemma":[0.00017065572,0.0005817411,4.36627e-7,0.00048760773,0.00013970524,0.00006039092,0.0000016459162,7.684874e-7,0.4242072,0.00086137216,0.5731179,0.000370539],"about_ca_topic_score_codex":0.000014411552,"about_ca_topic_score_gemma":0.000008162625,"teacher_disagreement_score":0.5730882,"about_ca_system_score_codex":0.00006438655,"about_ca_system_score_gemma":0.00033075214,"threshold_uncertainty_score":0.9998116},"labels":[],"label_agreement":null},{"id":"W2422166159","doi":"10.1007/978-1-4939-2877-4_9","title":"Precise Identification of Genome-Wide Transcription Start Sites in Bacteria by 5′-Rapid Amplification of cDNA Ends (5′-RACE)","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies; Université de Sherbrooke","keywords":"Genome; Rapid amplification of cDNA ends; Complementary DNA; Biology; Genetics; Gene; Computational biology; Transcription (linguistics); Promoter; Bacterial genome size; Identification (biology); Gene expression; Molecular cloning","score_opus":0.03329489901385498,"score_gpt":0.33884838465526446,"score_spread":0.3055534856414095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422166159","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4969914,0.0015183551,0.5010147,0.000053162024,0.00007469082,0.00024177408,0.00003530297,0.0000038938324,0.000066743996],"genre_scores_gemma":[0.74321634,0.00027614005,0.2557846,0.000038092025,0.000018501063,0.00008745904,0.00047635994,0.000022691795,0.00007982967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970626,0.0014629265,0.00072936906,0.00043362836,0.00009453848,0.00021688773],"domain_scores_gemma":[0.99896204,0.00005480129,0.00031642147,0.00048295816,0.0001270659,0.00005672348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025369476,0.00016844172,0.0003372683,0.00018897124,0.000012303707,0.000006809383,0.00027297027,0.0003272764,0.000025256666],"category_scores_gemma":[0.0006582985,0.00017460836,0.00008863747,0.0002275662,0.00011001737,0.0000069983266,0.000047044334,0.00008242748,0.0000022354939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016633185,0.00011374304,0.002180984,0.00002955517,0.00002255531,5.713116e-7,0.0001985821,0.000054137916,0.9884385,0.00015829792,0.000018438379,0.00861829],"study_design_scores_gemma":[0.0004793448,0.0002977747,0.0015106691,0.0000114842605,0.000014352121,0.0000016463184,0.00011263392,0.000054960772,0.99281603,0.002523373,0.0020218494,0.00015589598],"about_ca_topic_score_codex":0.00004595911,"about_ca_topic_score_gemma":0.000015505013,"teacher_disagreement_score":0.24622492,"about_ca_system_score_codex":0.000028199633,"about_ca_system_score_gemma":0.00005601283,"threshold_uncertainty_score":0.7120322},"labels":[],"label_agreement":null},{"id":"W2422168350","doi":"10.1007/978-1-60761-652-8_22","title":"Site-Directed Mutagenesis for Improving Biophysical Properties of VH Domains","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; University of Guelph; Institute for Biological Sciences","funders":"","keywords":"Mutagenesis; Computational biology; Site-directed mutagenesis; Chemistry; Genetics; Biology; Biophysics; Computer science; Mutation; Gene; Mutant","score_opus":0.0365152198856483,"score_gpt":0.4122104207249306,"score_spread":0.37569520083928226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422168350","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91128236,0.00028147077,0.08712271,0.00046508067,0.00015117877,0.0004473346,0.000017334058,0.000028326887,0.00020421999],"genre_scores_gemma":[0.3422796,0.000010545435,0.6571059,0.00014932606,0.00008751532,0.00007300866,0.000018889705,0.000018257206,0.0002568883],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871016,0.00030999232,0.00028115077,0.000289881,0.000089139074,0.00031966527],"domain_scores_gemma":[0.99925107,0.00022834814,0.00006088899,0.0002470779,0.00013300919,0.00007958525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007330415,0.00013414859,0.0004178983,0.00017347306,0.000036437297,0.0000041438593,0.0001270929,0.00018958769,0.000034127588],"category_scores_gemma":[0.001001811,0.00009505356,0.00016117626,0.00021311826,0.000321362,0.000011779084,0.000100736244,0.00027364766,0.0000030189178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004098809,0.00011640389,0.0033127852,0.00019431433,0.000039752376,0.000014989867,0.00007122048,6.5599295e-7,0.9621222,0.0018400693,0.000005634436,0.03187211],"study_design_scores_gemma":[0.00064203667,0.00038863267,0.0021719497,0.000018992228,0.00003154591,0.000021354219,0.000015738617,0.0021224932,0.9916664,0.00082197285,0.001992019,0.00010689695],"about_ca_topic_score_codex":0.00028332564,"about_ca_topic_score_gemma":0.000030485658,"teacher_disagreement_score":0.56998324,"about_ca_system_score_codex":0.000012424465,"about_ca_system_score_gemma":0.00008579988,"threshold_uncertainty_score":0.38761717},"labels":[],"label_agreement":null},{"id":"W2422331992","doi":"10.1007/978-1-61779-504-6_13","title":"Blue Native Polyacrylamide Gel Electrophoresis: A Powerful Diagnostic Tool for the Detection of Assembly Defects in the Enzyme Complexes of Oxidative Phosphorylation","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Oxidative phosphorylation; Enzyme; Polyacrylamide gel electrophoresis; Biochemistry; Biology; Mitochondrial disease; Mitochondrion; Gel electrophoresis; Molecular biology; Mitochondrial DNA; Gene","score_opus":0.02281157062943791,"score_gpt":0.32472893761039867,"score_spread":0.3019173669809608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422331992","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3745977,0.0014456209,0.62309337,0.000029348856,0.00016004482,0.00057550584,0.000016501175,0.0000027322274,0.000079183315],"genre_scores_gemma":[0.91261274,0.00019813523,0.0865923,0.00025193873,0.000043071213,0.00022991547,0.000041704425,0.000017469145,0.000012706759],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99698406,0.0019463415,0.00042242304,0.00033222107,0.000067977555,0.00024697089],"domain_scores_gemma":[0.9980529,0.0011827237,0.0002574011,0.00035455008,0.00013642157,0.000015984251],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015517303,0.00017014504,0.0002836348,0.00013002349,0.000041503936,0.000003670819,0.00029538947,0.00026093127,0.000011292169],"category_scores_gemma":[0.0033266284,0.00011678313,0.00014640352,0.00028762923,0.00023119058,0.0000034332209,0.00006228793,0.0001683816,7.487561e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005286138,0.00008782215,0.0011460537,0.000013207068,0.000055004835,0.0000018481469,0.00058474956,0.00005800044,0.992435,0.002942145,0.000014003438,0.002133576],"study_design_scores_gemma":[0.00064209686,0.001191422,0.005813346,0.0000099523295,0.000041251016,0.000011060061,0.0003163268,0.000121037345,0.9879381,0.0032465537,0.00054706924,0.00012175704],"about_ca_topic_score_codex":0.00016344147,"about_ca_topic_score_gemma":0.00026253043,"teacher_disagreement_score":0.53801507,"about_ca_system_score_codex":0.000017819235,"about_ca_system_score_gemma":0.00005627119,"threshold_uncertainty_score":0.4762278},"labels":[],"label_agreement":null},{"id":"W2422378147","doi":"10.1007/978-1-61779-231-1_4","title":"Eyeing Emergence: Modified Treatments for Terminating Dormancy of Conifer Seeds","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Simon Fraser University; Plant Biotechnology Institute","funders":"","keywords":"Dormancy; Germination; Seed dormancy; Biology; Seedling; Population; Horticulture; Botany; Agronomy","score_opus":0.07965715823193588,"score_gpt":0.39502896807294424,"score_spread":0.3153718098410084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422378147","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9584663,0.00019249016,0.038311355,0.00004745828,0.00020518777,0.00029520527,0.000018015442,0.000019303761,0.0024446803],"genre_scores_gemma":[0.8038416,0.0000205942,0.1957861,0.000116360316,0.000028315546,0.00007897364,0.000035637684,0.0000014032371,0.00009104765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879456,0.0004054769,0.00029542172,0.00024176697,0.00003233824,0.00023042137],"domain_scores_gemma":[0.9994715,0.00024701242,0.00012869279,0.000060470757,0.000059564576,0.00003277146],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047946174,0.000114599396,0.0002428858,0.00003501086,0.00004235375,0.000002188494,0.00018439049,0.00015599531,0.00017628308],"category_scores_gemma":[0.00014650288,0.00005087225,0.00009617888,0.00022102967,0.000079841164,0.000022611744,0.000048891354,0.00006264525,0.0000015824589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026143683,0.00006144423,0.0027340367,0.0000058662868,0.00001670249,0.0000013674805,0.00017423216,0.0000023282516,0.85493976,0.002652093,0.0000027276312,0.1393833],"study_design_scores_gemma":[0.0005433659,0.00094289635,0.06834498,0.000019859868,0.00003289761,0.000004789557,0.00032798856,0.0012062175,0.8860145,0.041742004,0.00055638014,0.0002640713],"about_ca_topic_score_codex":0.000097372256,"about_ca_topic_score_gemma":0.0000070249876,"teacher_disagreement_score":0.15747474,"about_ca_system_score_codex":0.000008384317,"about_ca_system_score_gemma":0.0000063458924,"threshold_uncertainty_score":0.20745103},"labels":[],"label_agreement":null},{"id":"W2422653476","doi":"10.1007/978-1-61779-361-5_14","title":"MAVisto: A Tool for Biological Network Motif Analysis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung; Institute of Genetics","keywords":"Biological network; Computer science; Network motif; Motif (music); Structural motif; Visualization; Computational biology; Network topology; Biological data; Complex network; Construct (python library); Theoretical computer science; Topology (electrical circuits); Data mining; Bioinformatics; Biology; Computer network; Mathematics","score_opus":0.03554127761394177,"score_gpt":0.3555518427007155,"score_spread":0.3200105650867737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422653476","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03370364,0.0009295813,0.963253,0.000028197812,0.0002510043,0.00038499778,0.000022145485,0.000015609228,0.0014117778],"genre_scores_gemma":[0.0906381,0.00008089077,0.9077671,0.0008254799,0.00015085169,0.00014372772,0.00026264455,0.000022350674,0.000108841814],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99786735,0.00047744633,0.0005145304,0.00052105304,0.000038641963,0.00058096077],"domain_scores_gemma":[0.9990859,0.000067535235,0.00015419502,0.00055492105,0.00006274646,0.00007469669],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001658921,0.00024843024,0.00045068495,0.00012754249,0.00006321793,0.000011715169,0.00038756765,0.00053832465,0.00005466656],"category_scores_gemma":[0.00020264502,0.00021634466,0.00038668528,0.0004148922,0.00016897744,0.0000019784848,0.00021735132,0.00015381788,0.0000038753697],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00078177266,0.0002958161,0.060931075,0.000042419222,0.0022960822,0.000019158311,0.000259686,0.0020819681,0.7836954,0.052128166,0.0011393431,0.0963291],"study_design_scores_gemma":[0.0065639773,0.005866032,0.034253765,0.00004626123,0.0016692501,0.00009096409,0.00024942553,0.024469899,0.29769483,0.4532616,0.1714088,0.0044251746],"about_ca_topic_score_codex":0.000015465977,"about_ca_topic_score_gemma":0.000020915351,"teacher_disagreement_score":0.48600057,"about_ca_system_score_codex":0.000016448925,"about_ca_system_score_gemma":0.000035569086,"threshold_uncertainty_score":0.88222796},"labels":[],"label_agreement":null},{"id":"W2422928741","doi":"10.1007/978-1-59745-396-7_5","title":"Detection of Activated Rab7 GTPase with an Immobilized RILP Probe","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Coastal Health","funders":"","keywords":"GTPase; Cell biology; Effector; Phagosome; Biogenesis; Small GTPase; Rab; GTP'; Biology; Chemistry; Intracellular; Biochemistry; Signal transduction; Enzyme","score_opus":0.011890834638734596,"score_gpt":0.3250465795309343,"score_spread":0.3131557448921997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422928741","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48562118,0.00019491513,0.5138647,0.000017683084,0.000030318832,0.00017589252,0.0000021259434,0.000009337865,0.000083834486],"genre_scores_gemma":[0.7347254,0.000035319277,0.2645425,0.00009092679,0.000026362644,0.000020296156,0.00052349595,0.000016536169,0.000019183051],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835056,0.0006059232,0.00029298163,0.00044338396,0.00006282775,0.00024435157],"domain_scores_gemma":[0.9993201,0.000012146942,0.00011948098,0.000406684,0.00008002491,0.00006157691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060896215,0.00018522056,0.0002749571,0.00012056359,0.000028423288,0.000005823946,0.0001550204,0.00031469244,0.000011454473],"category_scores_gemma":[0.000066533874,0.00015989851,0.000085347296,0.00023264193,0.00011139364,0.0000043023715,0.000016461581,0.00014242335,4.3122898e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083840394,0.00014775961,0.00062972587,0.000009781574,0.000026288366,0.000009167627,0.000041527062,0.00005095194,0.97902244,0.00017813769,1.201153e-7,0.019045698],"study_design_scores_gemma":[0.0010847944,0.002444052,0.0013792779,0.000010322168,0.000022680722,0.000018055063,0.000024135596,0.000097009804,0.991713,0.001182862,0.001826061,0.00019775017],"about_ca_topic_score_codex":0.000037629576,"about_ca_topic_score_gemma":0.00004219894,"teacher_disagreement_score":0.2493222,"about_ca_system_score_codex":0.000013440619,"about_ca_system_score_gemma":0.0000446456,"threshold_uncertainty_score":0.6520472},"labels":[],"label_agreement":null},{"id":"W2422930692","doi":"10.1007/978-1-61779-867-2_12","title":"The Murine Limb Bud in Culture as an In Vitro Teratogenicity Test System","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pharmacological Effects and Toxicity Studies","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Limb bud; In vitro; Test (biology); Biology; Cell biology; Botany; Genetics; Embryo","score_opus":0.02943170649321703,"score_gpt":0.4394702793549738,"score_spread":0.41003857286175677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422930692","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98252034,0.005204863,0.008053679,0.0008019729,0.00030900625,0.0007594682,0.0000060551138,0.000044693745,0.0022999072],"genre_scores_gemma":[0.9446651,0.00012226282,0.053626485,0.001295686,0.000106481995,0.00012367255,0.000007858626,0.000012200541,0.00004027455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968542,0.00194787,0.0003310025,0.00027869185,0.00007007153,0.0005181711],"domain_scores_gemma":[0.9988589,0.000714888,0.00006098272,0.00022897703,0.00002856264,0.00010766132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002514929,0.00018398529,0.000482948,0.00010610729,0.000056067867,0.000007832539,0.00015811936,0.00022578264,0.000006819021],"category_scores_gemma":[0.0013851336,0.000105036685,0.000073669544,0.00034169166,0.00014873028,0.000027905471,0.00014764037,0.00051261357,0.000006523621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024430334,0.0003621425,0.033906437,0.000041037525,0.00002689867,0.0001358213,0.00021849474,0.0000025053416,0.95612735,0.0010991213,0.000009390304,0.0078265],"study_design_scores_gemma":[0.0023916343,0.0010990893,0.036964685,0.0000606519,0.000046992387,0.00013201742,0.0004291868,0.00057027774,0.9512479,0.00065074844,0.006157437,0.00024938432],"about_ca_topic_score_codex":0.00013100507,"about_ca_topic_score_gemma":0.00003797302,"teacher_disagreement_score":0.045572806,"about_ca_system_score_codex":0.00013155826,"about_ca_system_score_gemma":0.000021547763,"threshold_uncertainty_score":0.42832717},"labels":[],"label_agreement":null},{"id":"W2422996330","doi":"10.1007/978-1-61779-455-1_8","title":"Mapping Interactomes with High Coverage and Efficiency Using the Shifted Transversal Design","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"","keywords":"Pooling; Interactome; Sensitivity (control systems); Computer science; Transversal (combinatorics); Yeast; Scale (ratio); Multiplexing; Computational biology; Distributed computing; Engineering; Biology; Artificial intelligence; Genetics; Electronic engineering; Mathematics; Telecommunications","score_opus":0.054972704315538704,"score_gpt":0.3674516223545101,"score_spread":0.31247891803897143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2422996330","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.437034,0.00053923164,0.5620729,0.000026931662,0.0000414438,0.00015366147,0.000002274786,0.0000036371518,0.0001259609],"genre_scores_gemma":[0.582161,0.00007412353,0.41756395,0.00012681296,0.000018036573,0.000015441014,0.0000061298224,0.000015758442,0.00001875237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979222,0.0011006083,0.00017869378,0.00039116156,0.000071988914,0.00033533858],"domain_scores_gemma":[0.9994816,0.00007300858,0.00004756964,0.00029442116,0.000046865513,0.000056525034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008662533,0.00016800097,0.00017566032,0.00010195709,0.00006827657,0.000015445388,0.00026319106,0.00015903401,0.000021453368],"category_scores_gemma":[0.00010853462,0.00011084144,0.00004111232,0.00021538815,0.00029472815,0.0000023719012,0.00014220299,0.00019053195,7.153161e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019705041,0.0000380505,0.002215671,0.000009287151,0.000047069178,0.00001965639,0.00035143108,0.0001426078,0.99269575,0.00029364083,0.0000013961732,0.0039884],"study_design_scores_gemma":[0.0006376654,0.0006547115,0.001671294,0.000016239,0.000012854227,0.00005792409,0.00014988588,0.0009490692,0.9937923,0.001506855,0.00033949484,0.00021172798],"about_ca_topic_score_codex":0.0000922742,"about_ca_topic_score_gemma":0.000010626915,"teacher_disagreement_score":0.145127,"about_ca_system_score_codex":0.000010952361,"about_ca_system_score_gemma":0.00006272646,"threshold_uncertainty_score":0.4519983},"labels":[],"label_agreement":null},{"id":"W2423962875","doi":"10.1007/978-1-62703-589-7_11","title":"Enrichment and Characterization of Glycopeptide Epitopes from Complex Mixtures","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Glycopeptide; Glycan; Epitope; Computational biology; Glycoprotein; Glycosylation; Identification (biology); Antigen; Peptide; Mass spectrometry; Chemistry; Biology; Biochemistry; Immunology; Chromatography","score_opus":0.020979507244802333,"score_gpt":0.366951162118104,"score_spread":0.34597165487330167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2423962875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7008064,0.00038546632,0.29797375,0.00019547666,0.000042789725,0.0002978302,0.000017739596,0.000004450545,0.00027612533],"genre_scores_gemma":[0.6408481,0.00021058586,0.35785064,0.00038676677,0.00004420989,0.00008821892,0.0004394815,0.00001572177,0.00011629007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984326,0.0006664264,0.00027619128,0.00033594624,0.00006580221,0.00022305163],"domain_scores_gemma":[0.99946034,0.00003863069,0.00008733866,0.00027151633,0.00008368143,0.000058468693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036158413,0.00012849447,0.00021088727,0.00009725688,0.0000269368,0.000013895684,0.00015636075,0.0001805851,0.0001892396],"category_scores_gemma":[0.00019142202,0.00011561211,0.000043906104,0.00010860449,0.00013910243,0.0000036211457,0.00019301819,0.00008824282,0.000005838605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002853026,0.000033105833,0.00520146,0.000008849272,0.000025238252,0.0000011779255,0.000027086247,0.0000029394128,0.9603681,0.00026713446,0.000026654992,0.03400974],"study_design_scores_gemma":[0.00043211586,0.00016697135,0.046820976,0.000007058798,0.000004108603,0.0000024184799,0.00001577647,0.00020983772,0.94324803,0.0013713454,0.007598827,0.00012250879],"about_ca_topic_score_codex":0.00034202848,"about_ca_topic_score_gemma":0.000012734822,"teacher_disagreement_score":0.05995829,"about_ca_system_score_codex":0.000007787762,"about_ca_system_score_gemma":0.000023109566,"threshold_uncertainty_score":0.4714525},"labels":[],"label_agreement":null},{"id":"W2424286338","doi":"10.1007/978-1-62703-071-7_7","title":"Cytokines as Potential Biomarkers for Parkinson’s Disease: A Multiplex Approach","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"Canadian Institutes of Health Research","keywords":"Dementia; Disease; Cytokine; Multiplex; Parkinson's disease; Biomarker; Medicine; Immunology; Bioinformatics; Neuroscience; Psychology; Biology; Internal medicine; Genetics","score_opus":0.05446385174780908,"score_gpt":0.3884777129187429,"score_spread":0.3340138611709338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2424286338","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.062173396,0.00013433867,0.9353393,0.00034433143,0.00081966794,0.0007127127,0.000023658265,0.00009123793,0.0003613593],"genre_scores_gemma":[0.26954758,0.000032896576,0.72726697,0.002413762,0.0001346162,0.00036908392,0.000026717446,0.000041563395,0.00016681975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966572,0.0018550012,0.00032694903,0.00055810827,0.000113821385,0.0004889046],"domain_scores_gemma":[0.9990419,0.00029350494,0.00011529689,0.0003352253,0.000026673923,0.00018739897],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008733038,0.00020535132,0.00021741912,0.0002327631,0.00010904114,0.000028621249,0.00026525257,0.00011620816,0.000041533902],"category_scores_gemma":[0.0022989018,0.00019104837,0.00014015262,0.00028299008,0.000105399384,0.00008935696,0.00009359316,0.00011881839,0.000016624934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012425894,0.000100564794,0.00020045224,0.000015185329,0.0000041949093,0.000009324444,0.00003402355,0.00012347806,0.96179247,0.032351118,0.000033958415,0.005210944],"study_design_scores_gemma":[0.0006741047,0.000057070498,0.00025815386,0.0000022247914,0.000013573696,0.00002942792,0.0000108939275,0.011105859,0.9635801,0.00451412,0.019541688,0.00021282227],"about_ca_topic_score_codex":0.0000032148664,"about_ca_topic_score_gemma":3.478637e-7,"teacher_disagreement_score":0.20807233,"about_ca_system_score_codex":0.000021587732,"about_ca_system_score_gemma":0.00003438141,"threshold_uncertainty_score":0.77907264},"labels":[],"label_agreement":null},{"id":"W2424456784","doi":"10.1007/978-1-4939-3344-0_8","title":"Nasopharyngeal Infection of Mice with Streptococcus pyogenes and In Vivo Detection of Superantigen Activity","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Superantigen; Streptococcus pyogenes; Microbiology; Pathogen; Human pathogen; In vivo; Biology; Immunology; Virology; Staphylococcus aureus; Bacteria; Immune system; T cell; Genetics","score_opus":0.035632116439206454,"score_gpt":0.39384241647884544,"score_spread":0.358210300039639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2424456784","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9071899,0.0002128347,0.091972254,0.000013047339,0.000052030926,0.0003938476,0.000003418831,0.000008728919,0.00015395986],"genre_scores_gemma":[0.9532292,0.000035784527,0.0466467,0.000008581954,0.000008038755,0.000055263143,0.000002139759,0.000008425863,0.000005862638],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904794,0.00040283072,0.00018747007,0.00020102151,0.000045184643,0.00011556239],"domain_scores_gemma":[0.99959654,0.00007605234,0.000075919736,0.00013338614,0.00007326105,0.000044866432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036533215,0.000102076636,0.0003284072,0.00025321185,0.000009328686,0.0000014430681,0.000018896431,0.00012734611,0.0000069328976],"category_scores_gemma":[0.00012697236,0.00008086714,0.000036205212,0.00031708457,0.000114962306,0.000026496327,0.000023416693,0.0000973477,1.7820435e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021783785,0.00013126284,0.44846147,0.000020692329,0.000036349724,0.0000072548128,0.000035610294,0.000027369197,0.5378585,0.000011854423,9.328039e-8,0.013191722],"study_design_scores_gemma":[0.0017197555,0.0010302124,0.21144982,0.000027937705,0.000037737474,0.00002864495,0.000016097812,0.00019678831,0.7852106,0.00020124172,0.000030436857,0.000050741313],"about_ca_topic_score_codex":0.00226363,"about_ca_topic_score_gemma":0.0005315954,"teacher_disagreement_score":0.24735211,"about_ca_system_score_codex":0.000047709862,"about_ca_system_score_gemma":0.00004661367,"threshold_uncertainty_score":0.34219468},"labels":[],"label_agreement":null},{"id":"W2424576687","doi":"10.1007/978-1-4939-0799-1_13","title":"Yeast Survival and Growth Assays","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Yeast; Saccharomyces cerevisiae; Biology; Microorganism; Cell survival; Computational biology; Microbiology; Cell biology; Biotechnology; Genetics; Bacteria; Cell culture","score_opus":0.021097262148658733,"score_gpt":0.380350700969447,"score_spread":0.35925343882078825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2424576687","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20054485,0.00082101667,0.7896934,0.00021031676,0.00020521619,0.00013082042,0.000007790494,0.000009753238,0.008376854],"genre_scores_gemma":[0.5374863,0.0002306572,0.461296,0.00035401917,0.00017467077,0.00003616623,0.000056713718,0.000037119076,0.00032832017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976087,0.0013057432,0.00018585585,0.00046912316,0.000075632444,0.00035493847],"domain_scores_gemma":[0.99943995,0.00005694745,0.000035693007,0.00030254095,0.00006539207,0.00009944502],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014794333,0.0001567993,0.00020614045,0.00009367986,0.000037697533,0.000015261527,0.00022382016,0.00024554066,0.000013366956],"category_scores_gemma":[0.0007723923,0.00014406726,0.00005590857,0.00013043023,0.00019112014,0.0000011121818,0.00030338377,0.0001661378,0.0000069333623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030874136,0.0000243573,0.009953668,0.000012255339,0.000017642622,0.000002566329,0.000008053867,0.0000072373214,0.9689632,0.008053907,0.000028709115,0.012897547],"study_design_scores_gemma":[0.0005898757,0.00039396607,0.0046150535,0.0000057380375,0.000006482863,0.000017668857,0.000016469055,0.0003397688,0.97069734,0.009300152,0.01377786,0.00023964992],"about_ca_topic_score_codex":0.000034767014,"about_ca_topic_score_gemma":0.000018028011,"teacher_disagreement_score":0.33694148,"about_ca_system_score_codex":0.0000070046126,"about_ca_system_score_gemma":0.00002908359,"threshold_uncertainty_score":0.58748925},"labels":[],"label_agreement":null},{"id":"W2424902414","doi":"10.1007/978-1-4939-3581-9_12","title":"Methods to Study Plant Programmed Cell Death","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada; Killam Trusts","keywords":"Programmed cell death; Abiotic component; Abiotic stress; Biology; Cell biology; Plant cell; Biotic stress; Root hair; Botany; Plant development; Apoptosis; Ecology; Biochemistry","score_opus":0.05351931597319377,"score_gpt":0.3935024001356624,"score_spread":0.33998308416246864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2424902414","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7690208,0.00007953482,0.22924003,0.00049374194,0.00022192035,0.00045489214,0.00003675519,0.000042185202,0.00041015653],"genre_scores_gemma":[0.20080675,0.00001332665,0.7984897,0.00037394903,0.000034544286,0.00011749102,0.00001795636,0.0000017735042,0.00014454048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955736,0.0032957774,0.00029713663,0.00039573037,0.0000477133,0.0003900676],"domain_scores_gemma":[0.9987607,0.00089779147,0.000070929666,0.0001359749,0.000040336883,0.00009424721],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019760453,0.00016902504,0.00028011127,0.000046221074,0.00008374585,0.00002156805,0.0003943008,0.00012612845,0.00021475133],"category_scores_gemma":[0.00037294315,0.000054175307,0.00008190636,0.0003169608,0.000034836918,0.000029329634,0.00021225402,0.00015660885,0.000029564086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026027707,0.00021198504,0.00536419,5.61261e-7,0.000010026314,0.00001043002,0.00003514762,1.7206382e-7,0.6468461,0.0000680598,0.000012283579,0.347415],"study_design_scores_gemma":[0.00033774486,0.001280946,0.031645887,0.000013748302,0.000014595417,0.000027395523,0.00027165408,0.000008098023,0.90564805,0.0018712393,0.058601968,0.000278689],"about_ca_topic_score_codex":0.0004978818,"about_ca_topic_score_gemma":0.00020791322,"teacher_disagreement_score":0.56924963,"about_ca_system_score_codex":0.00003657369,"about_ca_system_score_gemma":0.0000068104605,"threshold_uncertainty_score":0.23513764},"labels":[],"label_agreement":null},{"id":"W2424993940","doi":"10.1007/978-1-59745-407-0_15","title":"Companion Protease Inhibitors to Protect Recombinant Proteins in Transgenic Plant Extracts","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institutes of Health","keywords":"Recombinant DNA; Protease; Transgene; Genetically modified crops; Biology; Biochemistry; Enzyme; Gene","score_opus":0.022024860898787177,"score_gpt":0.35636957623172655,"score_spread":0.33434471533293936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2424993940","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5385092,0.00028552325,0.45765594,0.0010405914,0.00009109002,0.0021767705,0.0000336465,0.000021171732,0.0001861093],"genre_scores_gemma":[0.698987,0.000039019662,0.2995143,0.0006485703,0.00004326423,0.0005783099,0.00012998792,0.000021332897,0.000038229606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99759555,0.0006685589,0.0004809018,0.00068083056,0.00007735623,0.00049678574],"domain_scores_gemma":[0.9992973,0.000020910698,0.00007692648,0.00044451022,0.000026555266,0.0001337997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009533679,0.0002585253,0.00032573423,0.00020674938,0.00005421037,0.00001758852,0.000318034,0.00032037724,0.000008098493],"category_scores_gemma":[0.00013718534,0.00024005916,0.00010598919,0.00035451064,0.00006285266,0.0000035517194,0.000039747854,0.00028585663,0.000006028085],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013073548,0.00026524506,0.0004909966,0.000010660974,0.000010146226,0.000015462741,0.00007225568,0.000111280184,0.9715628,0.00064253673,0.00003407133,0.026653808],"study_design_scores_gemma":[0.0009893898,0.0007672666,0.0061489837,0.00004753872,0.000007889366,0.000029917941,0.000018582003,0.000058857968,0.9694454,0.0025726662,0.019539775,0.0003737166],"about_ca_topic_score_codex":0.00008323173,"about_ca_topic_score_gemma":0.0001324184,"teacher_disagreement_score":0.16047783,"about_ca_system_score_codex":0.000034973917,"about_ca_system_score_gemma":0.00010941757,"threshold_uncertainty_score":0.97893286},"labels":[],"label_agreement":null},{"id":"W2425589779","doi":"10.1007/978-1-62703-245-2_21","title":"Using Reporter Genes and the Escherichia coli ASKA Overexpression Library in Screens for Regulators of the Gram Negative Envelope Stress Response","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Reporter gene; Plasmid; Gene; Biology; Promoter; Escherichia coli; Bioreporter; Genetics; Transcription (linguistics); Gene expression; Molecular biology","score_opus":0.02383802945666883,"score_gpt":0.3434227793421443,"score_spread":0.31958474988547547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2425589779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96380657,0.0016259043,0.033338275,0.0003665704,0.00019349917,0.00060228235,0.000030263369,0.0000046765285,0.00003194353],"genre_scores_gemma":[0.6656963,0.00012198771,0.33376804,0.00023289758,0.000056825465,0.000049891325,0.00001381487,0.00002356918,0.000036627025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968842,0.0020308013,0.0004006876,0.00032144238,0.000046439192,0.00031639152],"domain_scores_gemma":[0.999021,0.00017824482,0.00024601838,0.0004854204,0.000032343294,0.00003698698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015087225,0.00017747197,0.00029978403,0.00007477028,0.000055299523,0.000009843294,0.00027841982,0.00048413975,0.0000036295553],"category_scores_gemma":[0.00070296595,0.00010848426,0.00009973607,0.00020282726,0.00061137014,0.0000050508847,0.0005051933,0.00013986991,3.978693e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012250353,0.000038726994,0.013476063,0.000013115334,0.000032340547,6.163026e-7,0.0000782664,0.000017941898,0.98154736,0.00074622745,0.000008775059,0.0028155386],"study_design_scores_gemma":[0.001026077,0.00012625815,0.013993237,0.000031389907,0.00001776519,0.000009580392,0.00008921174,0.00014593387,0.97935474,0.0018459401,0.0032185526,0.00014134364],"about_ca_topic_score_codex":0.000036547008,"about_ca_topic_score_gemma":0.000010580651,"teacher_disagreement_score":0.30042976,"about_ca_system_score_codex":0.000009205279,"about_ca_system_score_gemma":0.0000724874,"threshold_uncertainty_score":0.44238597},"labels":[],"label_agreement":null},{"id":"W2425779207","doi":"10.1007/978-1-60761-404-3_4","title":"Design of Fluorescent Fusion Protein Probes","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Förster resonance energy transfer; Biosensor; Fusion protein; Fluorescence; Fluorescent protein; Green fluorescent protein; Biophysics; Chemistry; Yellow fluorescent protein; Biology; Biochemistry; Recombinant DNA; Gene","score_opus":0.01711208492086313,"score_gpt":0.38807643873664516,"score_spread":0.370964353815782,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2425779207","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020633694,0.0011327387,0.9771548,0.00009446795,0.00004006081,0.00078536256,0.0000028744698,0.000026817863,0.00012916983],"genre_scores_gemma":[0.030647013,0.000109303415,0.96887285,0.00020544037,0.000022475018,0.00006575988,0.000024863906,0.000020013109,0.000032259697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99783444,0.00089231814,0.00038398293,0.0004829379,0.000066050816,0.00034025655],"domain_scores_gemma":[0.99922454,0.00001803837,0.00013974558,0.00049250864,0.000079215584,0.000045969216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088245684,0.00021104675,0.00029255252,0.00013263918,0.000025744237,0.0000047538833,0.00034736257,0.00032450535,0.0000075205176],"category_scores_gemma":[0.00035867476,0.00019617222,0.000076656805,0.00019986514,0.00017126504,0.0000027251997,0.00012335904,0.00015938973,9.936206e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013429548,0.000107488704,0.00016441428,0.000010689335,0.000007953742,0.000005809552,0.000019027199,0.00010823349,0.962542,0.0011295842,0.000018968649,0.035751514],"study_design_scores_gemma":[0.00029553357,0.0010801743,0.00010413008,0.000041094623,0.000005031773,0.0000071169497,0.000007700179,0.00011541281,0.9890684,0.008229931,0.00084595673,0.00019952364],"about_ca_topic_score_codex":0.0000060223374,"about_ca_topic_score_gemma":8.5446317e-7,"teacher_disagreement_score":0.03555199,"about_ca_system_score_codex":0.000016922228,"about_ca_system_score_gemma":0.000059819096,"threshold_uncertainty_score":0.79996705},"labels":[],"label_agreement":null},{"id":"W2426772027","doi":"10.1007/978-1-60761-780-8_10","title":"Basic Design of MRM Assays for Peptide Quantification","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Lundbeckfonden","keywords":"Selected reaction monitoring; Workflow; Proteomics; Chemistry; Computational biology; Computer science; Mass spectrometry; Quantitative proteomics; Nanotechnology; Chromatography; Tandem mass spectrometry; Biology; Biochemistry; Database; Materials science","score_opus":0.047273248967561174,"score_gpt":0.4293972055458553,"score_spread":0.3821239565782941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2426772027","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007435675,0.000036922098,0.99139893,0.00010921912,0.00003097631,0.00026858828,0.000017120885,0.000036285157,0.00066629704],"genre_scores_gemma":[0.017622568,0.000013361742,0.9816472,0.000033927106,0.0000197758,0.00055262545,0.000034517994,0.000016979677,0.00005904342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992549,0.00008523989,0.00025082697,0.00024362284,0.000023406905,0.00014203352],"domain_scores_gemma":[0.9990354,0.0003417488,0.00013502942,0.00040685083,0.00005958382,0.000021341812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008256171,0.000085816384,0.000163397,0.000051241866,0.00002527017,0.0000030550543,0.00021271568,0.00020999143,0.000040462568],"category_scores_gemma":[0.00046255463,0.00008624171,0.00005584266,0.00009139263,0.000092119044,0.000011146979,0.000032741686,0.00018826444,8.7668866e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012544356,0.000028447157,0.00016972225,0.000017182616,0.000004823985,1.6085657e-7,0.000008858957,0.000049919294,0.9110516,0.07011141,0.000009574688,0.018535784],"study_design_scores_gemma":[0.00011881355,0.000017535811,0.000007630572,0.0000041291896,0.000006136136,0.0000017246989,0.0000058720357,0.0019656133,0.8454125,0.14771552,0.0046687345,0.00007580038],"about_ca_topic_score_codex":0.000009515959,"about_ca_topic_score_gemma":0.0000021685412,"teacher_disagreement_score":0.07760411,"about_ca_system_score_codex":0.000011977975,"about_ca_system_score_gemma":0.000023575085,"threshold_uncertainty_score":0.35168347},"labels":[],"label_agreement":null},{"id":"W2426922068","doi":"10.1007/978-1-62703-465-4_13","title":"In Vitro Glycosylation Assay for Bacterial Oligosaccharyltransferases","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Heritage Foundation for Medical Research; Alberta Glycomics Centre","keywords":"Glycoconjugate; Glycosylation; Glycan; Glycosyltransferase; Biochemistry; In vitro; Enzyme; Chemistry; Oligosaccharide; Acceptor; Biology; Glycoprotein","score_opus":0.020673946848569213,"score_gpt":0.38543851239622823,"score_spread":0.364764565547659,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2426922068","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31815135,0.0002143139,0.67951185,0.00059599685,0.00020923604,0.00096048287,0.000025206758,0.000008517965,0.00032301937],"genre_scores_gemma":[0.419533,0.000060127386,0.57780135,0.00062018976,0.00017058275,0.0009905535,0.00055757206,0.00004076126,0.00022587412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976132,0.0009920112,0.00037495815,0.00049517915,0.00007228511,0.0004524],"domain_scores_gemma":[0.99933475,0.00012233884,0.00005015059,0.0003186428,0.00010062636,0.00007346602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001160373,0.00018746952,0.00025728584,0.00023476027,0.00003496544,0.000026834716,0.0002310623,0.0003474322,0.00019869178],"category_scores_gemma":[0.0008299556,0.00018360658,0.00010974579,0.00020845103,0.00008085906,0.000008994903,0.00007324293,0.00014937214,0.000015909482],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021278944,0.00006106574,0.00047719985,0.000015066145,0.000014159776,0.0000026947657,0.000015889775,0.000029095845,0.97608596,0.00041410688,0.00009816046,0.022573816],"study_design_scores_gemma":[0.0013365931,0.00019625555,0.0006148432,0.0000050591216,0.0000031949787,0.000005660537,0.000010845388,0.00074095075,0.97350764,0.004441141,0.018931597,0.00020619207],"about_ca_topic_score_codex":0.00027559957,"about_ca_topic_score_gemma":0.000060806546,"teacher_disagreement_score":0.101710536,"about_ca_system_score_codex":0.000031146013,"about_ca_system_score_gemma":0.00007006593,"threshold_uncertainty_score":0.7487259},"labels":[],"label_agreement":null},{"id":"W2427157253","doi":"10.1007/978-1-61779-612-8_19","title":"Genome-Wide Methylation Analysis","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Methylation; DNA methylation; Biology; Genome; Illumina Methylation Assay; Genetics; Computational biology; Methyltransferase; Gene; Gene expression","score_opus":0.021315820961904312,"score_gpt":0.38193653699899116,"score_spread":0.36062071603708684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427157253","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33240545,0.0055706846,0.6605084,0.000041244588,0.00013411805,0.000112383,0.0000039075694,0.000008028975,0.0012158174],"genre_scores_gemma":[0.5606955,0.00019005926,0.43846697,0.00016155328,0.00009797178,0.000029797517,0.00025024507,0.000019288549,0.00008858408],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99747866,0.001259684,0.00035765496,0.00038682314,0.00007435849,0.00044283853],"domain_scores_gemma":[0.9991479,0.000085742475,0.00012225288,0.00047477405,0.000060991017,0.00010837569],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018934503,0.0001862073,0.0002894397,0.0003327194,0.000042287356,0.000010740987,0.00018684016,0.00032483216,0.00005172548],"category_scores_gemma":[0.0005926738,0.00018485742,0.00020599354,0.00064626016,0.00007310219,0.0000039377633,0.00012759506,0.00012518324,0.000008175645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012753678,0.000041317817,0.17627634,0.0000030680144,0.000166124,5.9952225e-7,0.000039812345,0.0005931078,0.8178122,0.0003762808,0.0000015776869,0.0046767904],"study_design_scores_gemma":[0.0002512398,0.00009948014,0.11268223,0.0000010848933,0.00014761242,8.267074e-7,0.000020681719,0.00014469096,0.8592038,0.0019629565,0.025220647,0.00026474646],"about_ca_topic_score_codex":0.000024144212,"about_ca_topic_score_gemma":0.000017753224,"teacher_disagreement_score":0.2282901,"about_ca_system_score_codex":0.000026592235,"about_ca_system_score_gemma":0.000024278252,"threshold_uncertainty_score":0.7538267},"labels":[],"label_agreement":null},{"id":"W2427162414","doi":"10.1007/978-1-61779-931-0_2","title":"Recombinant Antibodies and In Vitro Selection Technologies","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":72,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Saskatchewan","funders":"","keywords":"Phage display; Computational biology; Antibody; Hybridoma technology; Biology; Function (biology); Computer science; Selection (genetic algorithm); Monoclonal antibody; Genetics; Artificial intelligence","score_opus":0.09553011711776768,"score_gpt":0.49759224310629213,"score_spread":0.4020621259885244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427162414","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014123588,0.9941846,0.0041334797,0.00020346089,0.00019494718,0.0006921774,0.000007663576,0.000051355848,0.00039107085],"genre_scores_gemma":[0.000008247292,0.74946654,0.25007465,0.00002722418,0.000027300679,0.00010725204,0.000054890425,0.00002622612,0.00020765651],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968197,0.0014067641,0.0005744155,0.00051717425,0.00008729566,0.0005946501],"domain_scores_gemma":[0.9990839,0.0004401477,0.0001327768,0.00024820998,0.00003460071,0.00006036531],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015467621,0.00036850985,0.0019487275,0.0007940538,0.000034566954,0.000008902165,0.0001669944,0.00083882175,0.000016162436],"category_scores_gemma":[0.0005079587,0.0002583479,0.00020910257,0.00063681335,0.00032021245,0.000019950025,0.00030743596,0.0011322958,0.000009870331],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000690524,0.000075093114,0.0007761685,0.0045261816,0.00007717164,0.000084920735,0.000011281583,1.9741414e-8,0.010870924,0.00046348677,0.0000058615788,0.98303986],"study_design_scores_gemma":[0.00029350407,0.00018122951,0.0001012297,0.0020034355,0.00019261935,0.00062633166,0.000019151188,0.000012956717,0.0053969915,0.0019143859,0.98894095,0.00031723094],"about_ca_topic_score_codex":0.00009398194,"about_ca_topic_score_gemma":0.000011611295,"teacher_disagreement_score":0.98893505,"about_ca_system_score_codex":0.00011079063,"about_ca_system_score_gemma":0.00011349245,"threshold_uncertainty_score":0.9999869},"labels":[],"label_agreement":null},{"id":"W2427177676","doi":"10.1007/978-1-4939-3676-2_4","title":"Cell Shaving and False-Positive Control Strategies Coupled to Novel Statistical Tools to Profile Gram-Positive Bacterial Surface Proteomes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Proteome; Lysis; Intracellular; Cell; Proteolysis; Computational biology; Cell biology; Chemistry; Biology; Biophysics; Biochemistry","score_opus":0.02057846384377164,"score_gpt":0.3570465264843252,"score_spread":0.33646806264055357,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427177676","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4530517,0.000025529229,0.54553664,0.00026151625,0.00010974018,0.00069310184,0.0002549392,0.000012362378,0.000054490072],"genre_scores_gemma":[0.5307579,0.000003466288,0.46853104,0.0003650715,0.000056276196,0.00010623392,0.00009715374,0.00002334714,0.000059514343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973778,0.00092323194,0.00041079315,0.0007956002,0.00007235407,0.00042023114],"domain_scores_gemma":[0.9988741,0.0003375581,0.0000965396,0.0003293316,0.00018734536,0.000175109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001128411,0.00025034128,0.00037236244,0.000054596436,0.000068390415,0.00010528585,0.00020206628,0.00024628534,0.00006581602],"category_scores_gemma":[0.0016475347,0.0002054296,0.00004985665,0.00011665704,0.00015076181,0.000010853356,0.00019197402,0.00009881518,0.000016833768],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002697456,0.000083491635,0.00060361536,0.000013679755,0.00002674259,0.0000043876876,0.00008463286,0.000012109705,0.9903882,0.0009663574,0.000013010833,0.0075340252],"study_design_scores_gemma":[0.0016272821,0.00071708515,0.011679506,0.00004345025,0.000021403019,0.00000730095,0.00011483275,0.00009078296,0.9844489,0.00037365692,0.00048107372,0.00039469675],"about_ca_topic_score_codex":0.00007846521,"about_ca_topic_score_gemma":0.000030093477,"teacher_disagreement_score":0.07770619,"about_ca_system_score_codex":0.00003967747,"about_ca_system_score_gemma":0.00009289675,"threshold_uncertainty_score":0.8377176},"labels":[],"label_agreement":null},{"id":"W2427523415","doi":"10.1007/978-1-4939-9597-4_4","title":"Profiling of Cytokine and Chemokine Responses Using Multiplex Bead Array Technology","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Multiplex; Chemokine; Cytokine; Bronchoalveolar lavage; Bead; In vivo; Molecular biology; Biology; Immune system; Immunology; Chemistry; Medicine; Materials science; Bioinformatics; Biotechnology","score_opus":0.022250308173652592,"score_gpt":0.4071783819719659,"score_spread":0.3849280737983133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427523415","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5087794,0.00040796664,0.4904077,0.00007789452,0.00002418584,0.0002222582,0.000009563538,0.00001475598,0.000056280554],"genre_scores_gemma":[0.35420927,0.000056673147,0.6455811,0.000069728056,0.000013032559,0.000013988571,0.00002134734,0.000016415152,0.000018428835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876064,0.00020913569,0.00029971285,0.00045810305,0.000036754704,0.00023568193],"domain_scores_gemma":[0.9992308,0.00004501099,0.00014291443,0.00047682849,0.000075235796,0.000029229197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048057138,0.00016234237,0.0002872346,0.00018909715,0.000025850351,0.0000032308933,0.00016481263,0.0003421016,0.0000027451833],"category_scores_gemma":[0.0003207815,0.00015602953,0.00005215037,0.00027367778,0.0002504008,0.0000019462161,0.00018035663,0.00014361649,4.319496e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006634449,0.000029594086,0.011812871,0.000017553857,0.000016374612,0.0000013395472,0.0000047789686,0.000030685722,0.9816949,0.0017504601,7.3903243e-7,0.004574409],"study_design_scores_gemma":[0.0003617432,0.00020704203,0.00021176918,0.000019568744,0.000009220128,0.000037855316,0.000030437339,0.00027687557,0.99320525,0.0034911048,0.0019824137,0.00016673048],"about_ca_topic_score_codex":0.000009913984,"about_ca_topic_score_gemma":0.0000022333966,"teacher_disagreement_score":0.15517342,"about_ca_system_score_codex":0.000012916875,"about_ca_system_score_gemma":0.00003539134,"threshold_uncertainty_score":0.63627},"labels":[],"label_agreement":null},{"id":"W2427570916","doi":"10.1007/978-1-61779-346-2_15","title":"Hydrogen–Deuterium Exchange Coupled to Mass Spectrometry to Investigate Ligand–Receptor Interactions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ambrose University; University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Hydrogen–deuterium exchange; Deuterium; Mass spectrometry; Chemistry; Ligand (biochemistry); Receptor; Chromatography; Physics; Atomic physics; Biochemistry","score_opus":0.03801853087599135,"score_gpt":0.37008432427641513,"score_spread":0.3320657934004238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427570916","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12832032,0.0000935097,0.8489999,0.0007773392,0.00013673617,0.0003060522,0.00003866868,0.0002139086,0.021113558],"genre_scores_gemma":[0.053832237,0.000027141568,0.94346625,0.0010884536,0.00009124853,0.00066784956,0.000033204957,0.000049941948,0.0007436794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998124,0.00017654858,0.00042628992,0.0006624467,0.00008356664,0.00052714685],"domain_scores_gemma":[0.9986911,0.00009640459,0.00010227224,0.0007656461,0.000055111854,0.0002895102],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054894644,0.00027705543,0.0004016378,0.0005032746,0.00005901826,0.000018536013,0.00055342977,0.00021663915,0.0051866854],"category_scores_gemma":[0.000279258,0.0002869426,0.00012625854,0.0010229968,0.00007406909,0.000030482848,0.00027052694,0.00036447908,0.00012545906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023610886,0.000081418446,0.0006821267,0.000021665712,0.00003625322,0.000009863709,0.00018037521,0.0000017404531,0.9897861,0.0072502145,0.00016278787,0.0017638461],"study_design_scores_gemma":[0.0001436261,0.00010945307,0.00007195993,0.000021118638,0.000015835678,0.000012113991,0.000042794214,0.000105969295,0.95110226,0.01617248,0.031893197,0.0003092008],"about_ca_topic_score_codex":0.00018756645,"about_ca_topic_score_gemma":0.00002107116,"teacher_disagreement_score":0.094466336,"about_ca_system_score_codex":0.00016060488,"about_ca_system_score_gemma":0.000028392002,"threshold_uncertainty_score":0.9999583},"labels":[],"label_agreement":null},{"id":"W2427949547","doi":"10.1007/978-1-0716-1503-4_3","title":"Computational Methods for Pseudogene Annotation Based on Sequence Homology","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Pseudogene; Annotation; Genome; Homology (biology); Genome project; Sequence homology; Computational biology; Gene; Human genome; Sequence (biology); Biology; Genetics; Gene Annotation; DNA sequencing; Computer science; Base sequence","score_opus":0.09560985834098228,"score_gpt":0.4991729017049865,"score_spread":0.4035630433640042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427949547","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000006427355,0.49304825,0.5059035,0.00002994989,0.00031317733,0.0005138201,0.00010506453,0.0000033155989,0.000076492004],"genre_scores_gemma":[0.0000026912385,0.39977673,0.5978793,0.00038119746,0.00008962709,0.00052313553,0.0012627792,0.00005618191,0.000028369132],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99309254,0.0042954967,0.000802933,0.0012420267,0.0000659908,0.0005010193],"domain_scores_gemma":[0.99773175,0.000948393,0.00037532815,0.0006588021,0.00020913844,0.00007657118],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020869505,0.0005789688,0.0016085003,0.00029205924,0.00008879416,0.000019277459,0.0004456122,0.0009288452,0.00001053776],"category_scores_gemma":[0.0011761345,0.0005519417,0.0006956252,0.00032283433,0.00021466387,4.440853e-7,0.00020949393,0.00027788777,0.0000022546594],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002305084,0.000079423255,0.000007684694,0.00073485455,0.00026207184,0.000010528474,0.000008550301,0.0021337508,0.047198217,0.0018029169,0.000046757337,0.9476922],"study_design_scores_gemma":[0.00056967454,0.0006802324,0.0000030916508,0.00038440587,0.00028042094,0.00005659853,0.0000070540655,0.0015897439,0.006339697,0.00420547,0.98518413,0.00069946825],"about_ca_topic_score_codex":0.000006451006,"about_ca_topic_score_gemma":0.0000027451326,"teacher_disagreement_score":0.9851374,"about_ca_system_score_codex":0.00007055606,"about_ca_system_score_gemma":0.00054680166,"threshold_uncertainty_score":0.9996932},"labels":[],"label_agreement":null},{"id":"W2427964477","doi":"10.1007/978-1-60327-565-1_21","title":"Internet Resources of Interest to Bacteriophage Workers","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Queen's University; University of Guelph","funders":"","keywords":"Identification (biology); Bacteriophage; The Internet; World Wide Web; Genome; Computer science; Biology; Gene; Genetics","score_opus":0.03452844857302422,"score_gpt":0.36755612808269106,"score_spread":0.33302767950966683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2427964477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7631757,0.000027462609,0.23261738,0.0003441096,0.00014666996,0.000109696426,0.0000029549713,0.000011793421,0.0035642341],"genre_scores_gemma":[0.5813258,0.000002564535,0.4175375,0.0007500557,0.000008943754,0.000005026178,0.0000026574753,0.0000062594154,0.0003611423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988536,0.000364433,0.00027034272,0.00027416003,0.000022902988,0.00021450853],"domain_scores_gemma":[0.9995827,0.000051145915,0.000069294896,0.0002300813,0.000004923675,0.0000618267],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036802635,0.00011383373,0.00020312835,0.00009012873,0.000012509379,0.000010124577,0.00028547627,0.00009287803,0.0011776873],"category_scores_gemma":[0.000105551146,0.00010385889,0.00006958812,0.00024345446,0.000101407204,0.000034785626,0.00018042911,0.0001436015,0.0000654128],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032999775,0.00004332593,0.0015971413,0.0000012101987,0.0000051354255,0.000008362972,0.0002685205,0.000018799508,0.938512,0.00010397773,0.000105337494,0.05930318],"study_design_scores_gemma":[0.00022161182,0.0004813099,0.17413999,0.00004333245,0.000009185497,0.000020074485,0.000085188716,0.000033273638,0.7850112,0.0011458009,0.03859625,0.00021278406],"about_ca_topic_score_codex":0.00036060938,"about_ca_topic_score_gemma":0.00013352901,"teacher_disagreement_score":0.18492012,"about_ca_system_score_codex":0.00005822324,"about_ca_system_score_gemma":0.000002708884,"threshold_uncertainty_score":0.99973536},"labels":[],"label_agreement":null},{"id":"W2428351003","doi":"10.1007/978-1-61779-139-0_15","title":"CELLISA: Reporter Cell-Based Immunization and Screening of Hybridomas Specific for Cell Surface Antigens","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Toronto","funders":"","keywords":"Antigen; Monoclonal antibody; Epitope; Immunogenicity; Biology; Chimeric antigen receptor; Molecular biology; Antibody; Immunization; Cell; T cell; Immune system; Immunology; Biochemistry","score_opus":0.0390042957580006,"score_gpt":0.3212772831267964,"score_spread":0.2822729873687958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2428351003","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.120349914,0.0029183726,0.87353843,0.000016862212,0.0010747254,0.00030098105,0.0000042415104,0.00002192475,0.0017745318],"genre_scores_gemma":[0.3724455,0.000121273144,0.62610734,0.00010945526,0.0000074779628,0.000015284097,0.00016537299,0.00002637622,0.0010019406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979934,0.0008933675,0.00050438684,0.00034103674,0.00001444555,0.00025333944],"domain_scores_gemma":[0.99904037,0.00022571762,0.00029705925,0.0003150774,0.00010865245,0.000013154693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009485648,0.00016697617,0.00033121544,0.00017164645,0.0000680454,0.00000435124,0.000119458746,0.00028014608,0.00027911575],"category_scores_gemma":[0.00008144153,0.0001624591,0.000104504026,0.000112641916,0.00018472763,0.00003535949,0.000049593844,0.00018409164,0.0000066396374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031134964,0.00012387887,0.0033059123,0.00003000453,0.000026367448,0.0000028479767,0.0002261544,0.000039750743,0.99398893,0.00017274836,0.00016056387,0.0016115009],"study_design_scores_gemma":[0.0012634888,0.0003581291,0.00081775826,0.000013393361,0.000024841358,0.000014388749,0.00016582923,0.00014820448,0.9787291,0.00021060558,0.018096823,0.00015740347],"about_ca_topic_score_codex":0.00008397533,"about_ca_topic_score_gemma":0.000001937445,"teacher_disagreement_score":0.25209558,"about_ca_system_score_codex":0.000015046736,"about_ca_system_score_gemma":0.000023175777,"threshold_uncertainty_score":0.66248894},"labels":[],"label_agreement":null},{"id":"W2428380121","doi":"10.1007/978-1-61779-295-3_15","title":"Bioinformatic Approach to Identify Chaperone Pathway Relationship from Large-Scale Interaction Networks","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of New Brunswick; Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research; Genome Canada","keywords":"Chaperone (clinical); Computational biology; Co-chaperone; Protein folding; Folding (DSP implementation); Biology; Cell biology; Hsp90; Genetics; Gene; Medicine","score_opus":0.0370195434298061,"score_gpt":0.34586232937292344,"score_spread":0.3088427859431173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2428380121","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.049417574,0.00043476635,0.94077724,0.000024884857,0.00048841623,0.0003724353,0.000021478285,0.000021706317,0.008441493],"genre_scores_gemma":[0.33057556,0.000025359484,0.66791433,0.0007890616,0.00010637797,0.0000836577,0.00041327288,0.000027079173,0.00006526979],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99786043,0.00050435984,0.0006267318,0.00044303728,0.000067986846,0.00049745716],"domain_scores_gemma":[0.998946,0.00005245813,0.00018321942,0.0006282,0.00005113076,0.00013896337],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012635783,0.00026163,0.0003103578,0.00016482205,0.000080974496,0.0000261108,0.00038817248,0.00051077106,0.000038079063],"category_scores_gemma":[0.0001556023,0.00025216007,0.00013321669,0.0002667142,0.00007279224,0.000011620921,0.0003303738,0.00034079643,0.00003071444],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007875943,0.001047199,0.030896448,0.00010381442,0.0004901307,0.000014017516,0.008694059,0.0107925255,0.8229636,0.021100642,0.000993746,0.102116235],"study_design_scores_gemma":[0.008321628,0.0028442803,0.07506525,0.0002857082,0.0003037006,0.00019013906,0.0075968,0.40837634,0.33423388,0.08379787,0.07344923,0.0055351616],"about_ca_topic_score_codex":0.00005995076,"about_ca_topic_score_gemma":0.000033317097,"teacher_disagreement_score":0.48872972,"about_ca_system_score_codex":0.000031998334,"about_ca_system_score_gemma":0.000032048916,"threshold_uncertainty_score":0.9999931},"labels":[],"label_agreement":null},{"id":"W2428771918","doi":"10.1007/978-1-4939-2842-2_2","title":"Fundamentals of Comparative Genome Analysis in Caenorhabditis Nematodes","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Genome; Synteny; Biology; Caenorhabditis elegans; Caenorhabditis; Comparative genomics; Genetics; Computational biology; Homology (biology); Genomics; Evolutionary biology; Gene","score_opus":0.04903078455261429,"score_gpt":0.4074573259543898,"score_spread":0.35842654140177554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2428771918","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55731493,0.0017133768,0.44020984,0.000034131186,0.00007270253,0.00014923263,0.000018521114,0.0000042286133,0.00048306677],"genre_scores_gemma":[0.701834,0.000069938425,0.29772007,0.00014656717,0.000021951628,0.000021337522,0.00013169744,0.000013698197,0.000040719664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99726915,0.0012399827,0.0005317373,0.0005103848,0.000098922465,0.00034984588],"domain_scores_gemma":[0.99908715,0.000042033756,0.00017076555,0.0004969775,0.00010083291,0.00010221812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012895705,0.00022345953,0.00065039913,0.00038963207,0.00001769319,0.000009650933,0.0003430371,0.00026333795,0.00002555717],"category_scores_gemma":[0.00014504827,0.00022937774,0.00016223917,0.0005731285,0.00025794678,0.0000027754058,0.0002144392,0.00014116654,0.000003419718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043135235,0.00011640146,0.04958097,0.000012481425,0.00023811214,0.000010893593,0.0009165507,0.0061213537,0.94215626,0.00043263126,0.000012857676,0.00035836935],"study_design_scores_gemma":[0.0012972485,0.00060824025,0.019620942,0.000009050434,0.00015587242,0.0000141228775,0.0008473236,0.0008944921,0.9688408,0.0051407944,0.0021071688,0.00046396197],"about_ca_topic_score_codex":0.0003157854,"about_ca_topic_score_gemma":0.0005214357,"teacher_disagreement_score":0.1445191,"about_ca_system_score_codex":0.00004238149,"about_ca_system_score_gemma":0.0000880731,"threshold_uncertainty_score":0.9353753},"labels":[],"label_agreement":null},{"id":"W2428785206","doi":"10.1007/978-1-60327-429-6_8","title":"Inferring Functional Relationships from Conservation of Gene Order","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Genome; Gene; Biology; Genetics; Computational biology; Order (exchange); Evolutionary biology","score_opus":0.06931029153897429,"score_gpt":0.34251681400922956,"score_spread":0.2732065224702553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2428785206","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5464049,0.0011405337,0.45193392,0.000056924073,0.000106563784,0.000063858024,0.000011901987,0.000001655868,0.00027975524],"genre_scores_gemma":[0.44978783,0.00014414947,0.54967654,0.00017679611,0.00004800267,0.000018869547,0.00010265796,0.000010824284,0.000034338922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873143,0.000492466,0.00029605004,0.00028678222,0.000045094068,0.00014816459],"domain_scores_gemma":[0.99941,0.000099364464,0.000099633035,0.00025095796,0.00011279975,0.00002728578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040883696,0.0001168341,0.00018804817,0.000070396316,0.000063159314,0.0000017699424,0.000102112775,0.00019064141,0.000014323694],"category_scores_gemma":[0.00053459406,0.000119432094,0.000059984915,0.00014219116,0.00015684868,5.535499e-7,0.000085721156,0.0001057737,0.00000158992],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027895669,0.000022433373,0.16838717,0.0000019665367,0.000050803214,0.0000016705216,0.00005069742,0.00042517405,0.8299881,0.000533564,0.000027397224,0.00048312164],"study_design_scores_gemma":[0.000529304,0.000101770835,0.20411809,0.000003784489,0.000014059559,0.000012348204,0.00003756807,0.00017307514,0.7864068,0.0044687116,0.003971742,0.00016274075],"about_ca_topic_score_codex":0.0001385414,"about_ca_topic_score_gemma":0.000041403815,"teacher_disagreement_score":0.097742625,"about_ca_system_score_codex":0.000009444455,"about_ca_system_score_gemma":0.00007037347,"threshold_uncertainty_score":0.48702997},"labels":[],"label_agreement":null},{"id":"W2428966220","doi":"10.1007/978-1-4939-2842-2_7","title":"Observing and Quantifying Fluorescent Reporters","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Fluorescence; Fluorescent protein; Fluorescence microscope; Transparency (behavior); Fluorescent labelling; Biology; Microscope; Biophysics; Green fluorescent protein; Computer science; Optics; Biochemistry; Gene; Physics","score_opus":0.08173638524769676,"score_gpt":0.4039121727368113,"score_spread":0.3221757874891145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2428966220","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43130395,0.002452571,0.56539696,0.00016194397,0.00031831756,0.00013289799,0.0000018295209,0.000013786651,0.00021775345],"genre_scores_gemma":[0.38966447,0.00016045799,0.60939765,0.0005796923,0.00007169934,0.000014958008,0.000034855508,0.00003068334,0.000045533143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978889,0.0006861512,0.0003622065,0.0005984042,0.00008320705,0.00038112502],"domain_scores_gemma":[0.99911624,0.000024833456,0.000112808724,0.0005117298,0.000077681914,0.000156733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016013754,0.00021461002,0.00027406975,0.000096775366,0.00004159487,0.000024786974,0.000232445,0.00027626348,0.0000042006895],"category_scores_gemma":[0.0006814413,0.000216078,0.00006548579,0.00010935563,0.00016355963,0.0000026799908,0.00033358583,0.00016455303,0.0000023844982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002400327,0.000029511542,0.03495162,0.000015295655,0.000029174917,0.000028310158,0.00026552938,0.0001462075,0.9571668,0.00035726506,0.00005728978,0.0069289817],"study_design_scores_gemma":[0.0010682987,0.00043512674,0.005803975,0.00002201529,0.000036119152,0.00015638377,0.00037630575,0.0011161286,0.9746946,0.00462746,0.011100321,0.00056323636],"about_ca_topic_score_codex":0.0000954256,"about_ca_topic_score_gemma":0.00004659513,"teacher_disagreement_score":0.0440007,"about_ca_system_score_codex":0.000023743156,"about_ca_system_score_gemma":0.000074734686,"threshold_uncertainty_score":0.8811405},"labels":[],"label_agreement":null},{"id":"W2429210147","doi":"10.1007/978-1-62703-113-4_10","title":"Preparation of λN-GST Fusion Protein for Affinity Immobilization of RNA","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"RNA; Affinity chromatography; Tandem affinity purification; Sepharose; Fusion protein; Chemistry; Chromatography; Biochemistry; Recombinant DNA; Enzyme; Gene","score_opus":0.027231031669062516,"score_gpt":0.39650266265968626,"score_spread":0.36927163099062377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2429210147","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38285258,0.0006200794,0.61567193,0.00001403566,0.00008710073,0.00055641896,0.0000099059525,0.0000031450836,0.00018480858],"genre_scores_gemma":[0.51922697,0.000021902479,0.48045263,0.000020694013,0.000035842695,0.00014551621,0.000056441524,0.000012151044,0.000027868664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826795,0.00083415885,0.00039078994,0.00023490613,0.000054567958,0.00021763807],"domain_scores_gemma":[0.9992312,0.000055753888,0.00025061355,0.00032229768,0.00010388432,0.000036229634],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017954259,0.00012649593,0.00025198422,0.00008476818,0.000022245435,0.0000023550842,0.00014938523,0.0003033221,0.000014746334],"category_scores_gemma":[0.00085335027,0.0001186004,0.0001099226,0.0001174908,0.00007325087,0.0000041555613,0.000077360855,0.000043095337,4.545017e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021965003,0.00011115582,0.00048269794,0.00006068936,0.000020651572,6.88616e-8,0.000052609266,0.000029811554,0.9824276,0.0048353733,0.0000048847155,0.011754804],"study_design_scores_gemma":[0.0003384578,0.00057622214,0.00012460435,0.000019390793,0.000014079736,0.000001383886,0.000024694342,0.000057681125,0.99357253,0.003643703,0.0015112909,0.00011595492],"about_ca_topic_score_codex":0.000015160624,"about_ca_topic_score_gemma":0.0000036758822,"teacher_disagreement_score":0.13637437,"about_ca_system_score_codex":0.000009406746,"about_ca_system_score_gemma":0.000039129794,"threshold_uncertainty_score":0.48363838},"labels":[],"label_agreement":null},{"id":"W2429556350","doi":"10.1007/978-1-62703-733-4_13","title":"Metabolic Flux Estimation in Mammalian Cell Cultures","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Metabolic flux analysis; Flux (metallurgy); Consistency (knowledge bases); Biological system; Bioprocess; Software; Flux balance analysis; Computer science; Chemistry; Biology; Metabolism; Biochemistry; Artificial intelligence","score_opus":0.007778371659576467,"score_gpt":0.31847225878434643,"score_spread":0.31069388712477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2429556350","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49476478,0.0028530287,0.5007703,0.00018302917,0.00036321188,0.00032382316,0.0000032641824,0.000015387019,0.00072320004],"genre_scores_gemma":[0.34499896,0.00012005902,0.65368557,0.00021955007,0.00009734288,0.00009719154,0.00010027879,0.000023157058,0.00065786624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99839467,0.00048981473,0.00030348668,0.00044940397,0.00004134012,0.0003212808],"domain_scores_gemma":[0.99950165,0.000006734961,0.000063144726,0.00033634715,0.00004321962,0.000048910984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005872658,0.00019128999,0.0002422752,0.00016856914,0.000020402294,0.00001593415,0.00018724226,0.00029183817,0.00006294644],"category_scores_gemma":[0.00024129763,0.00017363307,0.0000716622,0.00026095347,0.00005997593,0.000004756098,0.000078184086,0.00016960836,0.0000320692],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000073821548,0.000043990844,0.00058591674,0.000012921601,0.000008376531,0.0000015029193,0.00003080107,0.0010889362,0.9803772,0.0003543443,0.00015150593,0.017337125],"study_design_scores_gemma":[0.0003685915,0.00006341844,0.002499329,0.0000054458396,0.0000075534945,0.000011068099,0.00002174492,0.0003699425,0.9783276,0.0009454358,0.017172724,0.00020716243],"about_ca_topic_score_codex":0.00018933098,"about_ca_topic_score_gemma":0.000018369943,"teacher_disagreement_score":0.15291531,"about_ca_system_score_codex":0.000012071327,"about_ca_system_score_gemma":0.000021460832,"threshold_uncertainty_score":0.70805514},"labels":[],"label_agreement":null},{"id":"W2429650496","doi":"10.1007/978-1-60327-565-1_8","title":"In silico Characterization of DNA Motifs with Particular Reference to Promoters and Terminators","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Queen's University; Public Health Agency of Canada","funders":"","keywords":"In silico; Computational biology; Genome; Promoter; Identification (biology); Biology; Bacteriophage; Genetics; Gene; Gene expression","score_opus":0.011295476172952155,"score_gpt":0.32860300988561375,"score_spread":0.31730753371266157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2429650496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9388373,0.000004138224,0.060445614,0.00035090384,0.000021452479,0.00017552066,0.0000024928158,0.0000042326365,0.00015834853],"genre_scores_gemma":[0.86945224,0.0000052916184,0.13008884,0.00040498553,0.0000018751099,0.000010933034,0.0000047691865,0.0000042631737,0.000026806569],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992084,0.00022889233,0.0001652131,0.00022572602,0.00002545989,0.00014633167],"domain_scores_gemma":[0.9997666,0.000014683646,0.000048311173,0.00012957786,0.0000042130937,0.00003663791],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022875081,0.00008088439,0.00014465397,0.000063975735,0.0000115316525,0.000005436069,0.00007623089,0.000062683954,0.00006653164],"category_scores_gemma":[0.00003538282,0.00006788902,0.000011896253,0.00020860884,0.000072100134,0.00005801572,0.000047318594,0.0000774725,0.0000032846856],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001691601,0.000043636377,0.003925141,0.0000022658962,0.0000016039877,0.000009561179,0.0001855872,0.000014193235,0.9767733,0.00007487701,4.334952e-7,0.018952455],"study_design_scores_gemma":[0.00013013592,0.00024561255,0.31320897,0.00001671379,0.0000035053404,0.000011541946,0.000011343938,0.00006000619,0.68525696,0.00023644412,0.0007381309,0.00008062071],"about_ca_topic_score_codex":0.00009351165,"about_ca_topic_score_gemma":0.000038229155,"teacher_disagreement_score":0.30928382,"about_ca_system_score_codex":0.00003445039,"about_ca_system_score_gemma":0.0000036497486,"threshold_uncertainty_score":0.2768434},"labels":[],"label_agreement":null},{"id":"W2429861845","doi":"10.1007/978-1-4939-0354-2_2","title":"Structural Genomics of Human Proteins","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Structural Genomics Consortium","funders":"U.S. Public Health Service; Wellcome Trust","keywords":"Human proteome project; Structural genomics; Human proteins; Genomics; Human disease; Computational biology; Proteome; Human genome; Theme (computing); Biology; Data science; Protein structure; Computer science; Bioinformatics; Genome; Proteomics; Gene; Genetics; Biochemistry","score_opus":0.017791784703129546,"score_gpt":0.3661815449574328,"score_spread":0.3483897602543033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2429861845","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50621915,0.00018125575,0.49210653,0.000043890475,0.00010180828,0.00019345644,0.0000036574618,0.000006579364,0.0011436662],"genre_scores_gemma":[0.4871844,0.0000081796225,0.51232207,0.00020290588,0.0000772225,0.000029162007,0.000071636634,0.000018435936,0.00008598681],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998302,0.00080036744,0.00032308878,0.00031805923,0.000046496036,0.00021003501],"domain_scores_gemma":[0.9993652,0.000016365379,0.00012946675,0.00039533907,0.00004986604,0.0000437673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007743423,0.00013861577,0.00022220166,0.00009320913,0.000032676417,0.000005072714,0.0002489253,0.00022934817,0.0000204832],"category_scores_gemma":[0.0003860596,0.000130402,0.00008914028,0.00010212336,0.00016196579,0.0000015260202,0.00013703461,0.00011001856,0.0000013912115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015106848,0.000013386095,0.0016483363,0.000010058304,0.000013531226,4.3597686e-7,0.00001445571,0.000021614269,0.980874,0.008525722,0.000014133524,0.0088492045],"study_design_scores_gemma":[0.0003979026,0.00036433028,0.00057465327,0.0000052469672,0.0000044880576,0.0000041949284,0.000009279075,0.00014125531,0.98440933,0.00713369,0.006808584,0.00014704805],"about_ca_topic_score_codex":0.00002793676,"about_ca_topic_score_gemma":0.000012931488,"teacher_disagreement_score":0.020215554,"about_ca_system_score_codex":0.000012883446,"about_ca_system_score_gemma":0.000029976973,"threshold_uncertainty_score":0.5317639},"labels":[],"label_agreement":null},{"id":"W2429911350","doi":"10.1007/978-1-62703-628-3_5","title":"Goat Embryonic Stem-Like Cell Derivation and Characterization","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Embryonic stem cell; Biology; Cell biology; Cell potency; Stem cell; Induced pluripotent stem cell; Cellular differentiation; Germ layer; Embryoid body; Cell culture; KOSR; Cell type; Cell; Germ cell; Genetics; Gene","score_opus":0.016074332412521444,"score_gpt":0.333708127079074,"score_spread":0.31763379466655256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2429911350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57933986,0.00049409736,0.41923034,0.00019321906,0.00009796554,0.00032118647,0.0000037146042,0.00000864463,0.00031093878],"genre_scores_gemma":[0.5861196,0.0011768369,0.40631524,0.0014826944,0.00013803047,0.00039350727,0.0007693978,0.00009472517,0.003509997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789417,0.00093298266,0.00024099891,0.0005034505,0.00007176438,0.00035666415],"domain_scores_gemma":[0.9993656,0.00003534638,0.000086006265,0.0003519292,0.000081840335,0.00007926228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005920874,0.00017356343,0.00019436142,0.0001310944,0.00004433168,0.000030204532,0.0001973444,0.0002947577,0.000032793443],"category_scores_gemma":[0.000066262866,0.00016851677,0.000047591242,0.00016483324,0.000111338995,0.000006967697,0.00023882103,0.00014471666,0.000022818142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013482514,0.000030417286,0.0039037485,0.000025881667,0.000012287963,0.0000023625455,0.000015530899,0.0000061471646,0.9749478,0.00008877591,0.000031644584,0.020921938],"study_design_scores_gemma":[0.0005055088,0.00019600915,0.0071427347,0.0000069862836,0.0000058617998,0.000011966272,0.00002309639,0.0005787793,0.98174036,0.00036930272,0.009207942,0.00021143444],"about_ca_topic_score_codex":0.000026163269,"about_ca_topic_score_gemma":0.000003690153,"teacher_disagreement_score":0.020710504,"about_ca_system_score_codex":0.000020644218,"about_ca_system_score_gemma":0.000039807208,"threshold_uncertainty_score":0.6871914},"labels":[],"label_agreement":null},{"id":"W2430030760","doi":"10.1007/978-1-61779-582-4_15","title":"Analysis of Gene Order Evolution Beyond Single-Copy Genes","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Université de Montréal","funders":"","keywords":"Genome; Gene duplication; Synteny; Comparative genomics; Biology; Gene; Genetics; Segmental duplication; Genomics; Genome evolution; Tandem exon duplication; Gene family; Computational biology; Evolutionary biology","score_opus":0.051685950103184435,"score_gpt":0.4084582904954483,"score_spread":0.35677234039226385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2430030760","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004293072,0.56902,0.43009484,0.000002848133,0.0002195531,0.0003384276,0.00006308423,0.0000066547536,0.00021169898],"genre_scores_gemma":[0.000009129666,0.56952345,0.42875016,0.000019652158,0.00010752458,0.00009950284,0.001350685,0.000058443984,0.00008142816],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99467623,0.0025751202,0.0010530824,0.0009239944,0.00013940704,0.0006321514],"domain_scores_gemma":[0.9978687,0.00008816289,0.00064822804,0.001113932,0.00017530096,0.00010566693],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017192427,0.0005969448,0.0022539806,0.0011565732,0.000032198033,0.0000100143925,0.00062369194,0.0012361911,0.00007265467],"category_scores_gemma":[0.00024109418,0.0005465115,0.0010050678,0.001958669,0.00022119095,0.0000026376313,0.00032938988,0.00026504364,0.000008233561],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008807263,0.0001486215,0.00034477486,0.0007841344,0.0031931992,0.000004227594,0.000012350192,0.000039772825,0.27493462,0.00013670597,0.000004152922,0.72038865],"study_design_scores_gemma":[0.0003422339,0.00032286608,0.000035999972,0.00015936863,0.010191867,0.000024994739,0.000013256911,0.000042081632,0.029104847,0.00019724277,0.9586342,0.00093102903],"about_ca_topic_score_codex":0.000035756148,"about_ca_topic_score_gemma":0.00002177713,"teacher_disagreement_score":0.9586301,"about_ca_system_score_codex":0.00011221031,"about_ca_system_score_gemma":0.00017379751,"threshold_uncertainty_score":0.99969864},"labels":[],"label_agreement":null},{"id":"W2430238786","doi":"10.1007/978-1-4939-3360-0_16","title":"PCR Techniques in Characterizing DNA Methylation","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"DNA methylation; Computational biology; Biology; Computer science; Genetics; Gene","score_opus":0.021917387323246103,"score_gpt":0.37554544235110887,"score_spread":0.35362805502786276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2430238786","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35834262,0.0008071911,0.6395727,0.0002833963,0.0001096146,0.00017838842,0.0000042881106,0.00001369524,0.00068810384],"genre_scores_gemma":[0.44201553,0.00066195906,0.5566694,0.00026601978,0.00010045291,0.000096278105,0.000050065908,0.000035547124,0.00010475723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976416,0.001079342,0.0004020398,0.0004954057,0.000057858633,0.00032371885],"domain_scores_gemma":[0.99933285,0.00008243539,0.00011694758,0.00037404703,0.000047920432,0.0000458215],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017173479,0.0001790758,0.00023543143,0.00023772406,0.000021587135,0.000008757336,0.00019230325,0.00037221608,0.000017712233],"category_scores_gemma":[0.00061996595,0.00014307522,0.00007658479,0.00020140008,0.00008639008,0.0000046493706,0.00012815393,0.00010098661,0.0000037086397],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024562829,0.000023781637,0.008710642,0.0000040403575,0.000007378277,0.000003458814,0.000014132248,0.0000015169015,0.8190388,0.0005708262,0.0000017963964,0.17159906],"study_design_scores_gemma":[0.0003477861,0.00016735363,0.0060303505,0.000022951934,0.0000038136513,0.0000018069144,0.0000057339666,0.0000115085595,0.970137,0.0077456855,0.0153231425,0.00020289121],"about_ca_topic_score_codex":0.00001893334,"about_ca_topic_score_gemma":0.000029921093,"teacher_disagreement_score":0.17139617,"about_ca_system_score_codex":0.000039177452,"about_ca_system_score_gemma":0.00003746537,"threshold_uncertainty_score":0.5834438},"labels":[],"label_agreement":null},{"id":"W2430549442","doi":"10.1007/978-1-4939-2715-9_25","title":"Application of Pyrosequencing® in Food Biodefense","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Biodefense; Pyrosequencing; Bacillus anthracis; Amplicon; Biological warfare; Biology; Prophage; Yersinia pestis; Computational biology; Microbiology; Bacteriophage; Virulence; Polymerase chain reaction; Genetics; Gene; Bacteria; Toxicology","score_opus":0.04263623889146021,"score_gpt":0.4025743633195214,"score_spread":0.35993812442806117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2430549442","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45968318,0.0010022854,0.53824687,0.000048217025,0.000079275545,0.00019275333,0.000009992662,0.0000035851317,0.00073386123],"genre_scores_gemma":[0.78470725,0.000051664323,0.21498857,0.00008431154,0.000033563578,0.0000523098,0.00005153557,0.000015000494,0.000015826225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828637,0.00068037986,0.00032547215,0.00036059474,0.00006957849,0.0002776013],"domain_scores_gemma":[0.99933374,0.00002962473,0.00007768468,0.0003852369,0.00010018238,0.00007356181],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016951523,0.00012136042,0.00024002332,0.00015172092,0.000008646579,0.0000041890803,0.00023190457,0.00028093977,0.0000035883772],"category_scores_gemma":[0.0006818421,0.00011685188,0.000058108035,0.00028922735,0.00015251456,0.0000016579197,0.00014148596,0.00012241179,0.0000028209142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010983057,0.00005024298,0.0059978142,0.000010079244,0.000010362795,0.0000023855594,0.000041616546,0.000078191835,0.9741685,0.0017105603,0.0000074329846,0.017813018],"study_design_scores_gemma":[0.0008922861,0.0006053543,0.0008934103,0.0000056314266,0.0000024696944,0.000006280815,0.000033847027,0.00027840427,0.98221517,0.0075521017,0.0073672305,0.00014781885],"about_ca_topic_score_codex":0.00015258462,"about_ca_topic_score_gemma":0.00010023404,"teacher_disagreement_score":0.32502404,"about_ca_system_score_codex":0.00003061791,"about_ca_system_score_gemma":0.00011034761,"threshold_uncertainty_score":0.47650814},"labels":[],"label_agreement":null},{"id":"W2430609938","doi":"10.1007/978-1-4939-3676-2_8","title":"Liquid Chromatography-Tandem Mass Spectrometry to Define Sortase Cleavage Products","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Cleavage (geology); Pentapeptide repeat; Chemistry; Tandem mass spectrometry; Endopeptidase; Peptide; Mass spectrometry; Sortase; Tandem mass tag; Chromatography; Sortase A; Bottom-up proteomics; Liquid chromatography–mass spectrometry; Enzyme; Protein mass spectrometry; Biochemistry; Proteomics; Quantitative proteomics; Biology","score_opus":0.011598724099557133,"score_gpt":0.318084299932082,"score_spread":0.30648557583252484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2430609938","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52789927,0.0003230878,0.47036004,0.00079320563,0.00017686187,0.00019642811,0.000023132432,0.000019982772,0.00020799007],"genre_scores_gemma":[0.50963444,0.00010630873,0.48890153,0.0008896064,0.00018258697,0.000044248874,0.00012126008,0.00003204239,0.00008798828],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99795645,0.000430893,0.00034472888,0.00073464145,0.00007763813,0.00045565935],"domain_scores_gemma":[0.99918646,0.000029611565,0.000088949986,0.00049908186,0.00006703615,0.0001288614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046750047,0.00025271683,0.00028804352,0.00017329986,0.00003512691,0.000010452342,0.0002966592,0.00033673647,0.000032671294],"category_scores_gemma":[0.00067440653,0.00018032777,0.000105026425,0.00046784696,0.00012905375,0.0000038083883,0.00016132719,0.000109912304,0.000011626526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001538903,0.00002496685,0.0024825556,0.000011419017,0.00003135441,0.000008828924,0.0000062498243,4.2266848e-7,0.9911928,0.00065718504,0.00009808719,0.0053322273],"study_design_scores_gemma":[0.00042619574,0.0006168492,0.0026927593,0.00001645802,0.000009852699,0.00001658281,0.000003907709,0.000001030494,0.98752195,0.0014342548,0.0069644935,0.00029565577],"about_ca_topic_score_codex":0.0000051663865,"about_ca_topic_score_gemma":0.0000029617936,"teacher_disagreement_score":0.01854148,"about_ca_system_score_codex":0.000023732504,"about_ca_system_score_gemma":0.000034792785,"threshold_uncertainty_score":0.7353553},"labels":[],"label_agreement":null},{"id":"W2430751685","doi":"10.1007/978-1-59745-363-9_14","title":"Quantifying Interactions Between G-Quadruplex DNA and Transition-Metal Complexes","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"G-quadruplex; Transition (genetics); DNA; Nanotechnology; Chemistry; Materials science; Biochemistry","score_opus":0.0355654609468948,"score_gpt":0.4031609764758531,"score_spread":0.3675955155289583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2430751685","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65161544,0.00050816126,0.3466064,0.00029953098,0.00007252877,0.000081136604,0.000014573028,0.000015418023,0.0007868372],"genre_scores_gemma":[0.77967864,0.000060491373,0.21938951,0.0005269284,0.000115049814,0.000008047817,0.00016482278,0.000014988637,0.00004148504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859095,0.0003351247,0.00028777285,0.00045356152,0.000046459885,0.00028615593],"domain_scores_gemma":[0.999489,0.000051526215,0.00006787089,0.00028075985,0.000031677053,0.00007915011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003947796,0.00019494255,0.00027501123,0.000083281564,0.00006624523,0.000015806741,0.00017003983,0.00021910411,0.000025125182],"category_scores_gemma":[0.00008749648,0.00019806487,0.000100793935,0.00011945009,0.00015058526,0.0000044033673,0.000060725743,0.00019062123,0.000002101575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000243996,0.000036352736,0.0011830848,0.000008062289,0.000036441143,0.0000066581892,0.000052110103,0.0000058504343,0.97660035,0.0003913864,0.000022763112,0.02163252],"study_design_scores_gemma":[0.00046691147,0.00020843539,0.0028027012,0.0000131715815,0.00003048465,0.000045857276,0.00008920195,0.00006864153,0.9845499,0.0025936281,0.008863316,0.0002677852],"about_ca_topic_score_codex":0.000012466812,"about_ca_topic_score_gemma":0.0000070930005,"teacher_disagreement_score":0.12806326,"about_ca_system_score_codex":0.000011689323,"about_ca_system_score_gemma":0.000020650243,"threshold_uncertainty_score":0.8076851},"labels":[],"label_agreement":null},{"id":"W2430882143","doi":"10.1007/978-1-62703-730-3_6","title":"Knockdown Strategies for the Study of Proprotein Convertases and Proliferation in Prostate Cancer Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Proprotein Convertases; DU145; Gene knockdown; Prostate cancer; Cancer research; Gene silencing; Cell growth; RNA interference; Cancer; Biology; Medicine; Gene; Internal medicine; Endocrinology; LNCaP; RNA; Biochemistry","score_opus":0.01980861336685315,"score_gpt":0.3683779645246587,"score_spread":0.3485693511578056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2430882143","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91938436,0.0015244572,0.07682814,0.00011303295,0.0000577956,0.002064932,0.000010569021,0.000002271498,0.000014459815],"genre_scores_gemma":[0.9712822,0.00020568304,0.026497414,0.00014847206,0.000018284498,0.0017674266,0.00001149123,0.00001056466,0.000058451187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988784,0.00038212704,0.00025584252,0.00028077496,0.000032072483,0.00017077755],"domain_scores_gemma":[0.9995857,0.000045736528,0.000079636826,0.00019308212,0.000079037585,0.00001683377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038592232,0.00011896416,0.0001824083,0.000055731078,0.000024772675,0.00001764949,0.00012885085,0.00009288701,0.000010154382],"category_scores_gemma":[0.00006296055,0.000081457096,0.000027384993,0.000075555545,0.00009661726,0.0000051362495,0.00006929771,0.00007232415,3.1888584e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008279549,0.0000922575,0.006253261,0.000024440462,0.000037374644,7.6576396e-7,0.00030869443,0.00024629958,0.97673756,0.00006942015,0.00001520072,0.016131945],"study_design_scores_gemma":[0.0008101791,0.0012622118,0.0020903787,0.000009554767,0.000020756182,0.0000014259638,0.001731666,0.00066697964,0.9915833,0.0015236401,0.00017750543,0.0001224127],"about_ca_topic_score_codex":0.0010016528,"about_ca_topic_score_gemma":0.0005991924,"teacher_disagreement_score":0.051897865,"about_ca_system_score_codex":0.0000061816204,"about_ca_system_score_gemma":0.000063508436,"threshold_uncertainty_score":0.3321724},"labels":[],"label_agreement":null},{"id":"W2431057610","doi":"10.1007/978-1-4939-3061-6_7","title":"Advances in Conifer Somatic Embryogenesis Since Year 2000","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":113,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Forest Service; Natural Resources Canada","funders":"","keywords":"Somatic embryogenesis; Somatic cell; Biology; Explant culture; Embryo; Cryopreservation; Primordium; Botany; Horticulture; Biotechnology; Embryogenesis; Cell biology; Genetics; In vitro","score_opus":0.040453047512190865,"score_gpt":0.4300774027421433,"score_spread":0.3896243552299524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2431057610","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000027599779,0.95609045,0.041951366,0.000017799457,0.00032423905,0.0004970335,0.000037049016,0.000010143572,0.0010443364],"genre_scores_gemma":[0.0000016511884,0.8979542,0.10017909,0.000060604216,0.00014176464,0.00015191166,0.00081753643,0.000044921802,0.00064829964],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961741,0.0019985328,0.0006405352,0.0007213303,0.00008053068,0.00038499836],"domain_scores_gemma":[0.9990714,0.000053377196,0.00023024254,0.0005110732,0.00005541645,0.00007848375],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010223723,0.00043156944,0.0012299606,0.00021301163,0.000024430674,0.00001424108,0.00040859787,0.0010091591,0.000012126749],"category_scores_gemma":[0.00031389858,0.0003446779,0.00022524496,0.00030344076,0.00011851788,0.0000042530337,0.00014782263,0.00026653585,0.000024519757],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015385962,0.00006513478,0.000036291334,0.0013037731,0.00006476514,0.00005653966,0.000022901015,0.000030892217,0.050301325,0.00036491902,0.00015491682,0.94758314],"study_design_scores_gemma":[0.0002608619,0.0001012686,8.408935e-7,0.0005915472,0.00008684678,0.00006906008,0.000010458415,0.0000061041524,0.0057533565,0.00022093276,0.99248314,0.00041557063],"about_ca_topic_score_codex":0.0000352151,"about_ca_topic_score_gemma":0.00024093529,"teacher_disagreement_score":0.9923282,"about_ca_system_score_codex":0.00009470336,"about_ca_system_score_gemma":0.0006005722,"threshold_uncertainty_score":0.9999005},"labels":[],"label_agreement":null},{"id":"W2431214616","doi":"10.1007/978-1-4939-3127-9_39","title":"Analysis of G-Protein Coupled Receptor 30 (GPR30) on Endothelial Inflammation","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"GPER; Inflammation; Receptor; Estrogen receptor; Tumor necrosis factor alpha; Estrogen; Endocrinology; Downregulation and upregulation; Internal medicine; Umbilical vein; Chemistry; Cell biology; Biology; Cancer research; Medicine; Biochemistry; Cancer; In vitro","score_opus":0.016480963031360214,"score_gpt":0.35349189980695267,"score_spread":0.33701093677559246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2431214616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79770017,0.00063664926,0.20040789,0.00006245332,0.000141024,0.0002539166,0.000013619405,0.0000108193635,0.0007734791],"genre_scores_gemma":[0.706958,0.00009356562,0.29188815,0.00015995424,0.00013233667,0.00009378121,0.00044165188,0.000041730164,0.00019084272],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99765694,0.0012307815,0.0003745455,0.00038991176,0.00010099606,0.00024680764],"domain_scores_gemma":[0.99916667,0.000049995557,0.00017240256,0.00042209614,0.00009949434,0.00008935945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013403819,0.00018357189,0.00038931795,0.00032254786,0.000018664123,0.0000056070685,0.00020821502,0.00044216946,0.000027894888],"category_scores_gemma":[0.0007941204,0.00016245892,0.00019459827,0.00049239205,0.00012141063,0.0000017788639,0.00008672202,0.00017025952,0.000012208503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002356884,0.00005218392,0.0009596177,0.0000058980972,0.0004538168,0.00000493397,0.0000429589,0.0012812966,0.989309,0.0012267351,0.000012118805,0.0064157555],"study_design_scores_gemma":[0.0009320832,0.0008130401,0.00014700637,0.000009514825,0.00013247092,0.000001558344,0.000025937085,0.0018150271,0.99304515,0.0004668818,0.0024323156,0.00017902984],"about_ca_topic_score_codex":0.00004062115,"about_ca_topic_score_gemma":0.00000467878,"teacher_disagreement_score":0.09148025,"about_ca_system_score_codex":0.000028893684,"about_ca_system_score_gemma":0.00007574841,"threshold_uncertainty_score":0.6624883},"labels":[],"label_agreement":null},{"id":"W2431701777","doi":"10.1007/978-1-4939-2309-0_27","title":"Large-Scale Analysis of Membrane Transport in Yeast Using Invertase Reporters","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"","keywords":"Invertase; Yeast; Saccharomyces cerevisiae; Endocytic cycle; Reporter gene; Biochemistry; Cell biology; Biology; Chemistry; Enzyme; Endocytosis; Gene; Cell; Gene expression","score_opus":0.016685030061008417,"score_gpt":0.33332044600198485,"score_spread":0.31663541594097644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2431701777","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4951281,0.00011968938,0.50446725,0.000008837465,0.00004839299,0.00007137397,0.000012898083,0.0000029848095,0.00014046668],"genre_scores_gemma":[0.8287836,0.00004035904,0.16911572,0.00013666069,0.000018327286,0.000009247124,0.0018603496,0.000018874278,0.000016862487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978997,0.0006085619,0.0006040507,0.00050155364,0.000079159334,0.00030697425],"domain_scores_gemma":[0.99925184,0.00001749823,0.00015812808,0.0004704264,0.000042456406,0.000059671394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017731388,0.00017814114,0.0005203099,0.0004516096,0.000017507917,0.000002343118,0.00017180147,0.00032215274,0.000033411652],"category_scores_gemma":[0.00008544129,0.00018457983,0.000272615,0.00071988837,0.000109315086,0.0000026139182,0.000029304902,0.00013214487,2.9987322e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065854845,0.000076477045,0.13583137,0.00001798486,0.00013760834,0.000015297983,0.00012885519,0.0021098964,0.8610074,0.00013137965,1.589836e-7,0.00047775116],"study_design_scores_gemma":[0.0010698065,0.00015462542,0.027477263,0.000018338611,0.00039886602,0.000009017022,0.00012718052,0.02038755,0.9471208,0.00028266362,0.0026076494,0.00034628136],"about_ca_topic_score_codex":0.00021896203,"about_ca_topic_score_gemma":0.0010610212,"teacher_disagreement_score":0.33535156,"about_ca_system_score_codex":0.000016095633,"about_ca_system_score_gemma":0.000039530805,"threshold_uncertainty_score":0.75269467},"labels":[],"label_agreement":null},{"id":"W2431732493","doi":"10.1007/978-1-61737-988-8_3","title":"Canola Zygotic Embryo Culture","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Embryo; Zygote; Biology; Somatic embryogenesis; Maternal to zygotic transition; Embryogenesis; Canola; Embryo culture; Cell biology; Botany","score_opus":0.011982625388322739,"score_gpt":0.35141817449259116,"score_spread":0.33943554910426843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2431732493","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36799207,0.003802445,0.62047684,0.00045676937,0.0014524341,0.00033627925,0.000021784317,0.000034839828,0.0054265345],"genre_scores_gemma":[0.11829587,0.00015988653,0.87663794,0.0010360678,0.0003729111,0.000057006928,0.0004859669,0.000035066347,0.002919266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986512,0.0003759838,0.00021054185,0.00043326893,0.000046490302,0.00028252025],"domain_scores_gemma":[0.9994078,0.000013783772,0.00006095951,0.0003923259,0.00005467709,0.00007042457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046845747,0.00018217416,0.00019312114,0.000062646366,0.000054109067,0.00001402963,0.00025676517,0.0005407562,0.00002979748],"category_scores_gemma":[0.00034181678,0.00014695419,0.00008472546,0.00012568048,0.00011667052,0.000002046176,0.0000885163,0.00031188494,0.000010187335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014009124,0.000029067925,0.00093936967,0.0000049980117,0.000022989145,0.0000139362,0.000041710264,0.000020320187,0.99109876,0.0022117414,0.00070363504,0.004899471],"study_design_scores_gemma":[0.00026205415,0.00010102224,0.0002625288,0.000003140101,0.00001065898,0.00008311755,0.000014067256,0.000044887038,0.81672704,0.0006903422,0.18161382,0.0001873449],"about_ca_topic_score_codex":0.00010591193,"about_ca_topic_score_gemma":0.0011712734,"teacher_disagreement_score":0.25616112,"about_ca_system_score_codex":0.000008458675,"about_ca_system_score_gemma":0.00007925446,"threshold_uncertainty_score":0.5992618},"labels":[],"label_agreement":null},{"id":"W2432499415","doi":"10.1007/978-1-61779-436-0_2","title":"Neonatal Testicular Gonocytes Isolation and Processing for Immunocytochemical Analysis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Gonocyte; Somatic cell; Biology; Cell biology; Sertoli cell; Immunocytochemistry; Stem cell; Developmental biology; Gene; Genetics; Endocrinology; Spermatogenesis","score_opus":0.042222771589191056,"score_gpt":0.38791515042812835,"score_spread":0.3456923788389373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2432499415","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15075204,0.002314615,0.846429,0.00003664966,0.000037328435,0.00025468977,0.0000016550919,0.000028443745,0.00014558119],"genre_scores_gemma":[0.26860532,0.000011030064,0.7311359,0.000109784116,0.00001869939,0.0000497767,0.00005034435,0.000010514946,0.000008603338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990995,0.0001409999,0.0002243281,0.00031390286,0.00003680277,0.00018448666],"domain_scores_gemma":[0.9994973,0.00014225744,0.00006303366,0.0001668947,0.00007992624,0.000050618382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050554785,0.000119892604,0.00031307497,0.00024769682,0.000033080552,0.000006424403,0.000042729775,0.00017039591,0.000025208494],"category_scores_gemma":[0.0010047712,0.000103373124,0.00010504669,0.0004011428,0.000104056104,0.000025390866,0.00003363407,0.00011156217,6.9484173e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021651447,0.00006294612,0.0852359,0.000054590768,0.00023766607,0.000020198871,0.00019782747,0.0000054970405,0.8114242,0.0011013332,0.0000010894164,0.10144226],"study_design_scores_gemma":[0.0035925445,0.001154978,0.122347735,0.00007578681,0.003356971,0.0003005235,0.00020893128,0.082433306,0.762395,0.022854779,0.0007501677,0.00052925723],"about_ca_topic_score_codex":0.000042243104,"about_ca_topic_score_gemma":0.0000027673561,"teacher_disagreement_score":0.11785329,"about_ca_system_score_codex":0.000030819705,"about_ca_system_score_gemma":0.000030079416,"threshold_uncertainty_score":0.4215434},"labels":[],"label_agreement":null},{"id":"W2432733895","doi":"10.1007/978-1-62703-968-0_5","title":"Mapping Free-Standing Homing Endonuclease Promoters Using 5′RLM-RACE","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Homing endonuclease; Promoter; Homing (biology); Endonuclease; Computational biology; Biology; Genetics; DNA; Gene; Gene expression","score_opus":0.02874501914338689,"score_gpt":0.3494914982793768,"score_spread":0.3207464791359899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2432733895","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24600732,0.0005199871,0.75223994,0.00009062822,0.00025764268,0.00024294332,0.000004726563,0.000019934601,0.00061688275],"genre_scores_gemma":[0.17080864,0.00003308095,0.82843167,0.00042287956,0.0001427604,0.000034510384,0.000016860133,0.0000547767,0.000054853972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963184,0.0019145849,0.00040557093,0.0007092695,0.00009237064,0.0005597885],"domain_scores_gemma":[0.99880105,0.00009619706,0.00017329182,0.00077544723,0.00004352048,0.00011051498],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024664907,0.00029128473,0.0003837114,0.00020607449,0.000112191534,0.000029594408,0.0005030145,0.00038841847,0.000027373533],"category_scores_gemma":[0.0015558274,0.00029458018,0.00015844524,0.00021595231,0.000120412355,0.0000049460323,0.0003681674,0.00018431529,0.0000036796775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039009486,0.000024140814,0.0006836683,0.000022854034,0.000036754715,0.000011416579,0.000070514296,0.000098687546,0.9661021,0.0012723084,0.000007970006,0.03163058],"study_design_scores_gemma":[0.000619057,0.00018411955,0.0000482908,0.00005021361,0.000014926912,0.000038842692,0.00009601143,0.0015224539,0.97940785,0.0075055268,0.010132916,0.00037979987],"about_ca_topic_score_codex":0.00003987332,"about_ca_topic_score_gemma":0.0000061222922,"teacher_disagreement_score":0.076191716,"about_ca_system_score_codex":0.000042489264,"about_ca_system_score_gemma":0.000045288078,"threshold_uncertainty_score":0.99995065},"labels":[],"label_agreement":null},{"id":"W2433121821","doi":"10.1007/978-1-60761-380-0_22","title":"Optical and Biochemical Dissection of Connexin and Disease-Linked Connexin Mutants in 3D Organotypic Epidermis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connexins and lens biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Connexin; Epidermis (zoology); Biology; Keratinocyte; Cell biology; Mutant; Stratified squamous epithelium; Epithelium; Gap junction; Gene; Anatomy; Genetics; Cell culture","score_opus":0.013953533091531965,"score_gpt":0.3575025531416396,"score_spread":0.3435490200501076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2433121821","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9158264,0.0036076545,0.07950895,0.0005687603,0.000073308605,0.00024344417,0.0000131776815,0.0000088034085,0.00014954113],"genre_scores_gemma":[0.91205657,0.0003688817,0.08689542,0.000538733,0.00003922265,0.00001453198,0.00005785546,0.000015106162,0.000013698602],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977156,0.00074085034,0.00047148686,0.0006646881,0.000044492932,0.00036289313],"domain_scores_gemma":[0.99923015,0.00014671072,0.000095696,0.00031836756,0.000046406643,0.00016269261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079456164,0.00024004985,0.000453597,0.00017629602,0.000026033074,0.000007375495,0.00013982254,0.00044663256,0.000016531461],"category_scores_gemma":[0.0015961722,0.0002262588,0.000061378436,0.0001882197,0.00041596324,0.0000034183115,0.00013717555,0.0002046305,5.019947e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003760546,0.00009833552,0.0144598475,0.000019238518,0.000019895344,0.000031276697,0.000032053198,0.000004213494,0.95709646,0.0043015378,0.000006326334,0.023554793],"study_design_scores_gemma":[0.0028126857,0.0013383832,0.11616163,0.000060529816,0.000049400496,0.00014566096,0.00010513322,0.0007167127,0.85463053,0.022319164,0.0010235815,0.0006365682],"about_ca_topic_score_codex":0.000019624653,"about_ca_topic_score_gemma":0.0000230325,"teacher_disagreement_score":0.102465875,"about_ca_system_score_codex":0.000015470812,"about_ca_system_score_gemma":0.000062358995,"threshold_uncertainty_score":0.9226566},"labels":[],"label_agreement":null},{"id":"W2433470460","doi":"10.1007/978-1-60327-287-2","title":"Protocols for In Vitro Cultures and Secondary Metabolite Analysis of Aromatic and Medicinal Plants","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":66,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Aromatic plants; Secondary metabolite; Metabolite; Medicinal plants; Consistency (knowledge bases); In vitro; Biology; Traditional medicine; Biotechnology; Botany; Medicine; Computer science; Biochemistry","score_opus":0.018872226151628937,"score_gpt":0.3843399962776897,"score_spread":0.3654677701260608,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2433470460","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05449872,0.280419,0.5987911,0.0006370869,0.0004025506,0.04005836,0.0026489864,0.000048243957,0.022495931],"genre_scores_gemma":[0.0013366467,0.0031715066,0.952209,0.00114477,0.00036690946,0.004122778,0.015203626,0.00008623865,0.022358509],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827355,0.0004411296,0.00048376207,0.00053052226,0.000059052367,0.00021195812],"domain_scores_gemma":[0.99936163,0.00007011252,0.00024107435,0.00024286617,0.000033373857,0.000050911945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007689704,0.00027509342,0.000906611,0.00037327927,0.000022502067,0.000008567998,0.00014134728,0.00072998577,0.0000022293812],"category_scores_gemma":[0.00016847307,0.00021991496,0.00012712975,0.00010677882,0.00016157415,0.0000022132638,0.00006061287,0.00019021606,5.6798307e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016194678,0.000025507856,0.00006425835,0.00011548312,0.0004859445,0.000008877389,0.00007858634,0.000010613048,0.9756216,0.0002655374,0.00023289802,0.022928782],"study_design_scores_gemma":[0.0013571987,0.00048402397,0.00062951917,0.00011020354,0.00071719644,0.000043571094,0.000024351344,0.00016519752,0.86341286,0.0057265335,0.12688929,0.00044003365],"about_ca_topic_score_codex":0.00002644711,"about_ca_topic_score_gemma":0.00018918641,"teacher_disagreement_score":0.35341787,"about_ca_system_score_codex":0.000015560656,"about_ca_system_score_gemma":0.00014300438,"threshold_uncertainty_score":0.89678717},"labels":[],"label_agreement":null},{"id":"W2433971808","doi":"10.1007/978-1-62703-583-5_11","title":"Design of Transmembrane Peptides: Coping with Sticky Situations","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Integral membrane protein; Transmembrane protein; Membrane protein; Membrane; Biophysics; Peripheral membrane protein; Transmembrane domain; Cell membrane; Chemistry; Biochemistry; Biology; Computational biology; Receptor","score_opus":0.025339325283134415,"score_gpt":0.3350868074435585,"score_spread":0.3097474821604241,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2433971808","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029519474,0.00055686757,0.9688157,0.00018116253,0.00004663335,0.000546924,0.000002915631,0.000009046274,0.0003212642],"genre_scores_gemma":[0.09923768,0.00008586945,0.9000924,0.0002648536,0.0000196836,0.00018862494,0.000019815889,0.000024921928,0.00006609914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798554,0.0010426375,0.00029735098,0.0003478971,0.000063550644,0.00026301388],"domain_scores_gemma":[0.9992691,0.00012337966,0.00010315165,0.00036386115,0.00008987528,0.0000505957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072630536,0.00017057054,0.00027365304,0.00009775858,0.00003139392,0.000008505676,0.00022684464,0.00021851154,0.00007255899],"category_scores_gemma":[0.0002112119,0.00014178689,0.000060555943,0.00015299604,0.00013871556,0.0000032965743,0.000039811046,0.0000845347,0.0000055129076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046530502,0.000037841448,0.00010047224,0.000019917867,0.00004714148,0.000002380396,0.000053844276,0.0009379734,0.9871125,0.0007089385,0.0000144120195,0.010918002],"study_design_scores_gemma":[0.00042521217,0.0005546619,0.000064362575,0.000021373264,0.000018719898,0.000012418099,0.00004228694,0.00019912476,0.99273634,0.0052962494,0.00044637566,0.00018285018],"about_ca_topic_score_codex":0.00004524642,"about_ca_topic_score_gemma":0.000004871667,"teacher_disagreement_score":0.069718204,"about_ca_system_score_codex":0.000007700865,"about_ca_system_score_gemma":0.00006576362,"threshold_uncertainty_score":0.5781902},"labels":[],"label_agreement":null},{"id":"W2434228339","doi":"10.1007/978-1-4939-1755-6_7","title":"Isolation and Study of Cardiac Nuclei from Canine Myocardium and Adult Ventricular Myocytes","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Montreal Heart Institute","funders":"Canadian Institutes of Health Research","keywords":"Digitonin; Cytosol; Cell biology; Membrane; Inner membrane; Biology; Centrifugation; Nucleus; Myocyte; Ion channel; DNA; Biophysics; Chemistry; Biochemistry; Receptor; Enzyme","score_opus":0.009903667835133297,"score_gpt":0.33666805638652647,"score_spread":0.32676438855139317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2434228339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8773327,0.0019778665,0.12028855,0.000048442645,0.000053725595,0.00022332395,0.000008320166,0.000004283928,0.000062806765],"genre_scores_gemma":[0.8891014,0.00022185472,0.110427216,0.00008880044,0.000058288842,0.00002273707,0.000046143665,0.000016339229,0.00001724805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978182,0.0012468351,0.00023565846,0.00041218154,0.00007019524,0.00021694787],"domain_scores_gemma":[0.9994015,0.00008273474,0.00007294463,0.0002969602,0.00007465649,0.000071201466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007771733,0.00013792697,0.0003147561,0.00008803157,0.00003581769,0.000010305884,0.00010778728,0.00016351772,0.0000025711981],"category_scores_gemma":[0.00059421774,0.00012607203,0.00004596562,0.00010395852,0.00009890853,0.0000024275332,0.00019147222,0.000110264285,3.0381472e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005324241,0.000044316912,0.07596447,0.00000808416,0.0000804299,0.000003068231,0.00006058431,0.000018549239,0.9099368,0.00014996015,0.000008772795,0.013671753],"study_design_scores_gemma":[0.0022618696,0.0026871054,0.08182508,0.000020940523,0.00008559982,0.000009325923,0.0006582775,0.0031021077,0.90532094,0.0014970815,0.0021215996,0.0004100872],"about_ca_topic_score_codex":0.0008270318,"about_ca_topic_score_gemma":0.000053661377,"teacher_disagreement_score":0.013261666,"about_ca_system_score_codex":0.000007789992,"about_ca_system_score_gemma":0.000015226158,"threshold_uncertainty_score":0.5141068},"labels":[],"label_agreement":null},{"id":"W2435380872","doi":"10.1007/978-1-59745-394-3_6","title":"Characterization of HCV Quasispecies in the Hypervariable Region 1 (HVR1) by In Vitro Translation and Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Canadian Liver Foundation","keywords":"Viral quasispecies; Hypervariable region; Biology; In vitro; Virology; Chemistry; Computational biology; Genetics; Antibody; Virus; Hepatitis C virus","score_opus":0.04021353232022855,"score_gpt":0.387000840529761,"score_spread":0.34678730820953246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2435380872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80173075,0.0016243047,0.19100258,0.004245556,0.000029013323,0.00030694756,0.000005704925,0.0000043825794,0.001050748],"genre_scores_gemma":[0.70949185,0.00083578896,0.28855282,0.00083878735,0.000030167395,0.000015760115,0.00013130053,0.000007983714,0.00009551686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984213,0.0008530374,0.0002666642,0.00018533456,0.000087474764,0.00018619085],"domain_scores_gemma":[0.99959725,0.00019133426,0.000047204674,0.00012469759,0.000018184879,0.00002132444],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010368219,0.000087426495,0.00027616633,0.00026474104,0.000012791774,0.000004645957,0.0000799586,0.00012192969,0.000009696649],"category_scores_gemma":[0.00012576071,0.00006252468,0.0000334807,0.00046982357,0.000079958,0.00002403794,0.0000097063785,0.00022226277,3.246271e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032428847,0.00007855381,0.007741102,0.000026499363,0.0000052456535,0.000023688352,0.00019181256,8.548491e-7,0.9497066,0.00076533924,0.0000025784257,0.04113345],"study_design_scores_gemma":[0.0013607709,0.0006194506,0.089149795,0.00006361971,0.000015065909,0.000043999768,0.00012682054,0.001562472,0.8952127,0.0077114743,0.003991126,0.00014266837],"about_ca_topic_score_codex":0.00009084465,"about_ca_topic_score_gemma":0.000003968059,"teacher_disagreement_score":0.09755026,"about_ca_system_score_codex":0.000022595064,"about_ca_system_score_gemma":0.000018067463,"threshold_uncertainty_score":0.25496826},"labels":[],"label_agreement":null},{"id":"W2435561991","doi":"10.1007/978-1-60327-469-2_31","title":"Frizzled-7-dependent Tissue Separation in the Xenopus Gastrula","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Xenopus; Gastrulation; Frizzled; Cell biology; Biology; Chemistry; Wnt signaling pathway; Embryo; Genetics; Embryogenesis","score_opus":0.01828026644962611,"score_gpt":0.38829679528751676,"score_spread":0.37001652883789066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2435561991","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6841531,0.0012725901,0.3117865,0.00027984413,0.00023491263,0.0003377211,0.0000043926757,0.0000087533235,0.0019221648],"genre_scores_gemma":[0.7980978,0.0001996064,0.19999357,0.00089150347,0.00007844551,0.00010217927,0.00027431056,0.000016032152,0.0003465749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740005,0.0014702388,0.0003209671,0.00043179444,0.000070040376,0.00030691715],"domain_scores_gemma":[0.99948347,0.00004515554,0.00007581103,0.00033880275,0.000027318812,0.00002942748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011969261,0.0001754997,0.0001913085,0.00011098334,0.00007476797,0.000005836871,0.00028735437,0.00034413423,0.0000183986],"category_scores_gemma":[0.00015819706,0.00013977716,0.000051381536,0.00020657222,0.00017023619,0.000003195395,0.00009797338,0.00017143636,0.000012969241],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005257561,0.00005382475,0.014632355,0.0000031445793,0.000013913292,0.000035612895,0.00014424654,0.00012332163,0.97463584,0.00057772064,0.00007164502,0.009655812],"study_design_scores_gemma":[0.0006595527,0.00028348522,0.02289148,0.000005026773,0.000005953171,0.00028280896,0.00007102714,0.000044005646,0.9543662,0.0025946437,0.018558424,0.00023736284],"about_ca_topic_score_codex":0.000030141258,"about_ca_topic_score_gemma":0.000083600185,"teacher_disagreement_score":0.11394468,"about_ca_system_score_codex":0.000024672823,"about_ca_system_score_gemma":0.000060230024,"threshold_uncertainty_score":0.5699947},"labels":[],"label_agreement":null},{"id":"W2436954111","doi":"10.1007/978-1-62703-128-8_7","title":"Generation, Isolation, and Engraftment of In Vitro-Derived Human T Cell Progenitors","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lymphopoiesis; Haematopoiesis; Progenitor cell; Cell biology; Biology; In vitro; Immunology; Stem cell; Umbilical cord; Genetics","score_opus":0.027051810613492638,"score_gpt":0.3475207016445018,"score_spread":0.3204688910310091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2436954111","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.852789,0.0037971,0.14164016,0.00003980588,0.0011129209,0.00022873259,0.0000011074999,0.000011777343,0.00037943677],"genre_scores_gemma":[0.9328376,0.0000351266,0.066625796,0.0000965764,0.000021307882,0.000041644034,0.00010480296,0.000009564907,0.00022756467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979486,0.0012976556,0.00035469624,0.00017229763,0.000010784529,0.00021600584],"domain_scores_gemma":[0.99963516,0.000065127075,0.00011336253,0.00013732664,0.000037239435,0.000011783652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071746635,0.00011045399,0.00021647706,0.00021662044,0.00004129843,0.0000026901907,0.000057627007,0.00022546896,0.00012884407],"category_scores_gemma":[0.00007989091,0.00010452842,0.000040220373,0.000114616014,0.000096788586,0.00004644923,0.00004323205,0.00018228994,0.0000090443755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004326685,0.00013436096,0.0076199705,0.0000071578265,0.000020129497,2.7896428e-7,0.00040978222,0.000003417623,0.98886997,0.0004904879,0.000032897788,0.0023682693],"study_design_scores_gemma":[0.0006869066,0.00010136364,0.0030917295,0.000003415772,0.00001035997,0.000008111474,0.00011745386,0.000022266404,0.99133563,0.00011480864,0.0044139554,0.00009400738],"about_ca_topic_score_codex":0.00007706525,"about_ca_topic_score_gemma":0.000004405196,"teacher_disagreement_score":0.08004865,"about_ca_system_score_codex":0.000035620906,"about_ca_system_score_gemma":0.000011945127,"threshold_uncertainty_score":0.42625454},"labels":[],"label_agreement":null},{"id":"W2437195664","doi":"10.1007/978-1-4939-3369-3_14","title":"Analysis of Active Methylotrophic Communities: When DNA-SIP Meets High-Throughput Technologies","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Throughput; Computational biology; Computer science; Biology; Telecommunications","score_opus":0.023300345662043243,"score_gpt":0.3653166065549207,"score_spread":0.34201626089287746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2437195664","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4295145,0.0021905832,0.5673328,0.00046310143,0.00009273144,0.0001466143,0.00005535377,0.000022509603,0.00018181097],"genre_scores_gemma":[0.69938344,0.0014559879,0.2988239,0.000067311696,0.000017883885,0.000056350756,0.000111190806,0.00002651935,0.000057407655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968388,0.0016795918,0.0005266006,0.0004810898,0.00010473983,0.00036919164],"domain_scores_gemma":[0.99818575,0.00029880702,0.0002830527,0.001026906,0.00016551679,0.000039986688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001172628,0.00026199085,0.00062455365,0.00048702135,0.000047212034,0.000007167812,0.0005499553,0.00056622055,0.000040551204],"category_scores_gemma":[0.00077501114,0.00019910942,0.0002541436,0.00058979704,0.0005109098,0.000004688718,0.00041973277,0.0001453717,0.0000016271553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065517845,0.000057757363,0.003711684,0.000007866311,0.00069726945,0.000002301646,0.00009645976,0.00013947509,0.92289484,0.0023278918,0.0000041904414,0.06999475],"study_design_scores_gemma":[0.0005367314,0.00038240003,0.0021091716,0.000015206325,0.0002387507,7.998874e-7,0.00022484416,0.000073107556,0.97307307,0.018499102,0.004586649,0.0002601972],"about_ca_topic_score_codex":0.00021577098,"about_ca_topic_score_gemma":0.0001963703,"teacher_disagreement_score":0.26986897,"about_ca_system_score_codex":0.00003967135,"about_ca_system_score_gemma":0.00005430049,"threshold_uncertainty_score":0.81194466},"labels":[],"label_agreement":null},{"id":"W2437202027","doi":"10.1007/978-1-62703-017-5_6","title":"Classical Molecular Dynamics in a Nutshell","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Molecular dynamics; Computer science; Dynamics (music); Software; Constant (computer programming); Boundary (topology); Statistical physics; Computational science; Physics; Mathematics; Computational chemistry; Chemistry; Mathematical analysis","score_opus":0.02723446936357481,"score_gpt":0.4135564547933766,"score_spread":0.3863219854298018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2437202027","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000024602345,0.6365511,0.3610365,0.000019380219,0.00034977277,0.0006610104,0.00004614514,0.00001404596,0.0012974853],"genre_scores_gemma":[0.000021550175,0.66916126,0.32888162,0.00019784161,0.00014643391,0.0002875292,0.0010272033,0.00013462095,0.0001419184],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99306196,0.0033170553,0.0011393351,0.0012653994,0.00013462598,0.0010816181],"domain_scores_gemma":[0.99801433,0.00009260541,0.0003770314,0.0012808425,0.00004915925,0.00018603465],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015658664,0.00090066704,0.0021032714,0.0005261351,0.00003114691,0.000023439698,0.0009697641,0.0026760218,0.000019366002],"category_scores_gemma":[0.00043731605,0.0008233432,0.0007348895,0.00064350385,0.0003000376,0.0000037805069,0.0007393172,0.0011868216,0.000016130922],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001989366,0.00013855936,0.00007438588,0.0014532555,0.00015604183,0.00013479475,0.000010330829,0.000009782866,0.01267038,0.012021136,0.000007997029,0.97330344],"study_design_scores_gemma":[0.0005435572,0.00021954505,0.0000046272175,0.00069065805,0.0003041575,0.00020324426,0.000010183178,0.00017363293,0.0017280327,0.005212144,0.9896865,0.001223712],"about_ca_topic_score_codex":0.00003322108,"about_ca_topic_score_gemma":0.00012900689,"teacher_disagreement_score":0.9896785,"about_ca_system_score_codex":0.00041452586,"about_ca_system_score_gemma":0.00047613843,"threshold_uncertainty_score":0.9994217},"labels":[],"label_agreement":null},{"id":"W2437457447","doi":"10.1007/978-1-60327-292-6_25","title":"Genetic Cell Ablation","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Organogenesis; Ablation; Cell; Regeneration (biology); Biology; In vivo; Cell biology; Computational biology; Biotechnology; Medicine; Genetics; Internal medicine; Gene","score_opus":0.06292336139072457,"score_gpt":0.4454583566240929,"score_spread":0.3825349952333683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2437457447","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010237617,0.756013,0.23747247,0.000009532089,0.0002402026,0.0005980057,0.0000027418325,0.000023476374,0.005630357],"genre_scores_gemma":[9.32528e-8,0.54072857,0.4583869,0.00013641347,0.00004582002,0.00012588673,0.00005753831,0.000022028591,0.0004967394],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973245,0.0014623661,0.0005163517,0.0003887549,0.000053886764,0.0002541231],"domain_scores_gemma":[0.99892116,0.00036076835,0.00017668039,0.0004211253,0.000036759855,0.000083531544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005062386,0.00026945493,0.0014781911,0.00033468724,0.000013274691,0.00000647621,0.00009714743,0.00058795704,0.0005198511],"category_scores_gemma":[0.00047689906,0.00020010564,0.0002921666,0.00029204946,0.0000644402,0.0000066899265,0.00004928779,0.0003340107,0.0002120115],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000017079242,0.000034414054,0.00005224955,0.0031935999,0.000049835096,0.000016267368,0.000004487218,3.829848e-7,0.0036033483,0.00011794794,0.000094545794,0.99283123],"study_design_scores_gemma":[0.00028638117,0.00012320318,0.000014928623,0.0009795816,0.000497338,0.00003472981,0.0000023193109,0.000036897756,0.00064184394,0.0006821934,0.99651575,0.0001848294],"about_ca_topic_score_codex":0.000016971373,"about_ca_topic_score_gemma":1.2201043e-7,"teacher_disagreement_score":0.9964212,"about_ca_system_score_codex":0.00007288276,"about_ca_system_score_gemma":0.00014030754,"threshold_uncertainty_score":0.8160071},"labels":[],"label_agreement":null},{"id":"W2437789759","doi":"10.1007/978-1-60761-652-8_23","title":"Phenotype Based Functional Gene Screening Using Retrovirus-Mediated Gene Trapping in Quasi-Haploid RAW 264.7 Cells","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Mutagenesis; Phenotype; Biology; Gene; Retrovirus; Ploidy; Genetics; Somatic cell; Mutation","score_opus":0.022166753971024623,"score_gpt":0.37864958599659904,"score_spread":0.3564828320255744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2437789759","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35357535,0.00052918436,0.64517117,0.00003325637,0.0004518709,0.00015469866,0.000009740443,0.00001619983,0.000058551028],"genre_scores_gemma":[0.35992113,0.000026715059,0.6393219,0.00031980328,0.00016580992,0.000023656807,0.00015984934,0.00004799754,0.000013110339],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975874,0.0005227993,0.00049482886,0.00071195466,0.00010973129,0.0005733327],"domain_scores_gemma":[0.99910647,0.000102121,0.00010479174,0.0005062211,0.00006695557,0.00011344831],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013275741,0.00031746126,0.0003687346,0.0003202894,0.00005787648,0.00001763276,0.000269726,0.000563021,0.000057411507],"category_scores_gemma":[0.0004223864,0.00034917914,0.00014616521,0.00040182433,0.00012638328,0.0000040474033,0.00013036498,0.00052136695,0.000002706027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009136148,0.00006632793,0.0016641795,0.000013355017,0.000032107233,0.00002562657,0.000018659373,0.0195239,0.97445554,0.000035521978,0.0000064433066,0.0040670023],"study_design_scores_gemma":[0.001074597,0.00014685967,0.001277298,0.000011251805,0.000016822112,0.00001985138,0.000017023302,0.035908557,0.95962435,0.00010628416,0.0014178327,0.00037927812],"about_ca_topic_score_codex":0.00009478201,"about_ca_topic_score_gemma":0.00009027312,"teacher_disagreement_score":0.01638466,"about_ca_system_score_codex":0.000026663798,"about_ca_system_score_gemma":0.000116106,"threshold_uncertainty_score":0.99989605},"labels":[],"label_agreement":null},{"id":"W2438003748","doi":"10.1007/978-1-60761-588-0_19","title":"Transfection of siRNAs in Multiple Myeloma Cell Lines","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Kay Kendall Leukaemia Fund","keywords":"Small interfering RNA; Transfection; RNA interference; Gene silencing; Streptolysin; Trans-acting siRNA; Cell culture; Cell biology; Functional genomics; Biology; Molecular biology; Gene; Chemistry; RNA; Computational biology; Genomics; Genetics; Genome; Bacterial protein","score_opus":0.01615049534678582,"score_gpt":0.3471396162468635,"score_spread":0.3309891209000777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438003748","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77877134,0.00031377064,0.21992534,0.000032249598,0.00029555673,0.00012207379,0.0000055423816,0.000004238101,0.0005298959],"genre_scores_gemma":[0.8255872,0.00008759581,0.17404832,0.00010083764,0.00005057906,0.000024972556,0.000033656645,0.000013821201,0.000053009702],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863344,0.00040343785,0.0003322154,0.00035363232,0.000037720238,0.00023955078],"domain_scores_gemma":[0.99948156,0.000050483166,0.000066172724,0.00031227406,0.000055626533,0.000033886303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006545308,0.00014534216,0.00022997287,0.00016086981,0.0000138579035,0.0000037601835,0.00021409217,0.0003806723,0.000019765399],"category_scores_gemma":[0.00026637307,0.00014078911,0.00010449434,0.00016459965,0.00012126765,0.0000022498837,0.000059267346,0.00023425336,0.0000024155777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007927397,0.000088313434,0.018718071,0.000014408491,0.000009546646,0.000005201622,0.00003948963,0.00006682376,0.966892,0.00008693726,0.0000076166725,0.013992285],"study_design_scores_gemma":[0.0005966301,0.00031500493,0.004341447,0.00000691727,0.0000052729342,0.000007786959,0.000030219639,0.00020902489,0.9919673,0.0007170887,0.0016571264,0.00014616837],"about_ca_topic_score_codex":0.0001337981,"about_ca_topic_score_gemma":0.0006468571,"teacher_disagreement_score":0.04681588,"about_ca_system_score_codex":0.000005275848,"about_ca_system_score_gemma":0.00003886057,"threshold_uncertainty_score":0.57412136},"labels":[],"label_agreement":null},{"id":"W2438005845","doi":"10.1007/978-1-62703-730-3_19","title":"DNA Electronic Switches Based on Analyte-Responsive Aptamers","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research; Francis Crick Institute; Natural Sciences and Engineering Research Council of Canada; Canadian Institute for Advanced Research","keywords":"Aptamer; Analyte; DNA; Computational biology; Nanotechnology; Chemistry; Materials science; Biology; Chromatography; Molecular biology; Biochemistry","score_opus":0.01000302078348767,"score_gpt":0.36206669035958006,"score_spread":0.35206366957609236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438005845","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2199856,0.00025721148,0.7773701,0.0007061368,0.00006876954,0.00036358734,0.000006327653,0.00005531805,0.001186959],"genre_scores_gemma":[0.63005453,0.000060521394,0.3673301,0.0022014845,0.000043431966,0.00006536448,0.00007793835,0.00003054578,0.00013607358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972735,0.00095915596,0.00034123266,0.0007326227,0.00009364393,0.0005998466],"domain_scores_gemma":[0.9988918,0.0000983669,0.00013546043,0.00067649136,0.00011305113,0.00008488914],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008295662,0.00030896097,0.00036527633,0.00030128116,0.00005380946,0.000018872806,0.00030147991,0.00039493185,0.00002025003],"category_scores_gemma":[0.00063846074,0.00026424162,0.00022996678,0.00039074753,0.00022021889,0.0000029748423,0.00009330734,0.00027685665,0.000010633785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086544045,0.00006464305,0.0006376193,0.0000036326012,0.00005530339,0.000004583913,0.0000042944393,0.00008042313,0.9791308,0.0003086446,0.00011051215,0.019512977],"study_design_scores_gemma":[0.00034995106,0.0007111957,0.000314826,0.000011185518,0.000025458454,0.000005776239,0.000034124343,0.0014395991,0.98710734,0.0039093853,0.0057527055,0.0003384833],"about_ca_topic_score_codex":0.00004485053,"about_ca_topic_score_gemma":0.000021548645,"teacher_disagreement_score":0.41006896,"about_ca_system_score_codex":0.000057212386,"about_ca_system_score_gemma":0.00009812301,"threshold_uncertainty_score":0.999981},"labels":[],"label_agreement":null},{"id":"W2438112359","doi":"10.1007/978-1-59745-406-3_1","title":"The Intranuclear Environment","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hotel Dieu Hospital","funders":"National Institute of General Medical Sciences","keywords":"Counterintuitive; Nucleus; Range (aeronautics); Space (punctuation); Macromolecule; Chemical physics; Physics; Nanotechnology; Biophysics; Statistical physics; Chemistry; Biology; Neuroscience; Computer science; Materials science; Quantum mechanics","score_opus":0.0244160673110184,"score_gpt":0.37359882426375,"score_spread":0.3491827569527316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438112359","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000055081623,0.87139094,0.12769328,0.000023651926,0.0001940258,0.0004040271,0.0000070436795,0.000009012062,0.0002724948],"genre_scores_gemma":[6.14136e-7,0.86711615,0.13194032,0.000070766924,0.00017769783,0.00015654336,0.00015936946,0.00008875681,0.00028978518],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99374384,0.003828164,0.00078584865,0.0009242701,0.000109117915,0.0006087479],"domain_scores_gemma":[0.9979907,0.00015420595,0.0003255493,0.0014120048,0.000020837238,0.00009665237],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010919217,0.0005552824,0.0012199789,0.0001443625,0.00015542246,0.000018158722,0.000914941,0.00095650036,0.000021370683],"category_scores_gemma":[0.00019520866,0.00039115237,0.00092589395,0.00026830594,0.00048020616,7.5407723e-7,0.00049872894,0.000462241,0.000041919684],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000626241,0.000024950055,0.0000048876655,0.00012731426,0.00037731449,0.000019953179,0.0000043482682,0.000044319324,0.0028797435,0.00021697322,0.00030212957,0.9959918],"study_design_scores_gemma":[0.00011275582,0.00009523402,0.0000011193521,0.00010487019,0.00018239424,0.00010690887,0.0000036620922,0.000013204138,0.00067797065,0.0002511137,0.9980538,0.00039700276],"about_ca_topic_score_codex":0.0000057815455,"about_ca_topic_score_gemma":0.0000055240307,"teacher_disagreement_score":0.99775165,"about_ca_system_score_codex":0.00007307751,"about_ca_system_score_gemma":0.00015204518,"threshold_uncertainty_score":0.999854},"labels":[],"label_agreement":null},{"id":"W2438632701","doi":"10.1007/978-1-61779-219-9_31","title":"Mouse Phenotyping with MRI","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Centre for Phenogenomics; Hospital for Sick Children","funders":"","keywords":"Magnetic resonance imaging; Human disease; Preclinical imaging; Ex vivo; Computer science; Selection (genetic algorithm); In vivo; Disease; Artificial intelligence; Pathology; Biology; Medicine; Radiology; Biotechnology","score_opus":0.023790159162687986,"score_gpt":0.33856839187618337,"score_spread":0.31477823271349537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438632701","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06280275,0.0035915077,0.92650414,0.0000322019,0.0005446608,0.00023538836,0.000007564879,0.00002373307,0.00625809],"genre_scores_gemma":[0.02498805,0.00064885407,0.97263104,0.0007565973,0.00035279666,0.00008861634,0.000046856,0.000057004214,0.00043020144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981422,0.0005508007,0.000250305,0.0005656021,0.00005612672,0.00043497034],"domain_scores_gemma":[0.9991815,0.000020390646,0.00009049301,0.0005593439,0.000058401416,0.000089878085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006173137,0.00023134593,0.00029435853,0.000113713606,0.000047094636,0.0000075145554,0.00029911578,0.00027353916,0.000052635853],"category_scores_gemma":[0.0001500841,0.0002005689,0.00009368426,0.0001751037,0.00019439941,0.0000028127608,0.00014403033,0.00016994396,0.0000062352387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017051281,0.000058259484,0.0011344259,0.000010524196,0.000060419796,0.0000049322907,0.000113134505,0.000018342116,0.9731873,0.002049774,0.00007116762,0.023121186],"study_design_scores_gemma":[0.0008387751,0.00027082372,0.00039301012,0.000009212256,0.000027191236,0.000031581585,0.000065516484,0.000023295746,0.9015332,0.0011774076,0.09529568,0.00033434288],"about_ca_topic_score_codex":0.00012213354,"about_ca_topic_score_gemma":0.00014875006,"teacher_disagreement_score":0.095224515,"about_ca_system_score_codex":0.000013001111,"about_ca_system_score_gemma":0.00007873243,"threshold_uncertainty_score":0.81789625},"labels":[],"label_agreement":null},{"id":"W2438760595","doi":"10.1007/978-1-59745-028-7_16","title":"Purification and Proteomic Analysis of Lysosomal Integral Membrane Proteins","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Proteomics; Organelle; Gel electrophoresis; Membrane protein; Biochemistry; Context (archaeology); Polyacrylamide gel electrophoresis; Membrane; Mitochondrion; Cell biology; Biology; Function (biology); Chemistry; Enzyme","score_opus":0.01776500880883556,"score_gpt":0.3195895850272609,"score_spread":0.30182457621842534,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438760595","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53100145,0.0003127859,0.46836844,0.000023494733,0.000018845976,0.00018275465,0.0000056145836,0.0000037611887,0.00008287085],"genre_scores_gemma":[0.66829306,0.00019571517,0.33051312,0.000035488345,0.000015563974,0.00005240237,0.000842467,0.000010945347,0.000041234627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861383,0.0004396794,0.0003290805,0.0003847803,0.000055632478,0.00017700756],"domain_scores_gemma":[0.99947405,0.000013018987,0.00010975604,0.00030612317,0.00005449621,0.000042584736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054072967,0.00013919118,0.00032240074,0.00027902398,0.000031630927,0.000002610489,0.00013006853,0.00025255038,0.000015777765],"category_scores_gemma":[0.00010644823,0.00013105097,0.00014475588,0.00040459883,0.00023641626,0.0000022189988,0.00003864457,0.00010629459,3.638931e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082566374,0.000046218913,0.035173807,0.000013702587,0.00018701269,0.0000057914126,0.000074659176,0.000055819408,0.9626197,0.00067952863,2.3816337e-7,0.0010609264],"study_design_scores_gemma":[0.00034561,0.00018748546,0.029011901,0.0000042449783,0.00012296725,0.000013441418,0.000014301716,0.00045959937,0.9689763,0.00027180344,0.00045193054,0.00014041057],"about_ca_topic_score_codex":0.00007539506,"about_ca_topic_score_gemma":0.000036821788,"teacher_disagreement_score":0.1378553,"about_ca_system_score_codex":0.000008561368,"about_ca_system_score_gemma":0.000038948896,"threshold_uncertainty_score":0.5344103},"labels":[],"label_agreement":null},{"id":"W2438771022","doi":"10.1007/978-1-60761-416-6_13","title":"Drug Ratio-Dependent Antagonism: A New Category of Multidrug Resistance and Strategies for Its Circumvention","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Celator Pharmaceuticals (Canada)","funders":"","keywords":"In vivo; Drug; Pharmacology; Multiple drug resistance; Drug resistance; Pharmacokinetics; Antagonism; Medicine; Biology; Internal medicine; Biotechnology; Receptor","score_opus":0.049905925049200245,"score_gpt":0.4295207698217567,"score_spread":0.37961484477255647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438771022","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007496612,0.57345146,0.42493778,0.000045856184,0.00016928258,0.0011278917,0.000030318553,0.000017178134,0.0002127426],"genre_scores_gemma":[0.000019623361,0.6711274,0.32709742,0.000039524584,0.0000561426,0.000098795404,0.00023201102,0.000040417308,0.0012887025],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99712956,0.0007057676,0.0009992395,0.00067991996,0.00012394339,0.0003615443],"domain_scores_gemma":[0.9987369,0.0001938752,0.0004673737,0.00040228598,0.00008858631,0.000110944246],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014328564,0.00043771544,0.0022709477,0.00037144244,0.00003942351,0.0000139621325,0.00018825925,0.0005435029,0.000010034368],"category_scores_gemma":[0.00010984992,0.00035635178,0.00045838955,0.0002489081,0.000106307234,0.00003719963,0.000025472958,0.00037810212,8.256274e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019640343,0.00016755538,0.0000029837356,0.023274692,0.00029332185,0.00012549128,0.00024490614,0.0000015044013,0.09755327,0.04053166,0.000046559537,0.83756167],"study_design_scores_gemma":[0.004862634,0.0006256622,0.000025909592,0.015537986,0.003641535,0.00012102513,0.00038799466,0.00004230436,0.04889345,0.065882675,0.8586168,0.0013619667],"about_ca_topic_score_codex":0.000026415199,"about_ca_topic_score_gemma":0.00008707062,"teacher_disagreement_score":0.8585703,"about_ca_system_score_codex":0.0000726592,"about_ca_system_score_gemma":0.0006942709,"threshold_uncertainty_score":0.99988884},"labels":[],"label_agreement":null},{"id":"W2438966953","doi":"10.1007/978-1-4939-3136-1_1","title":"Overview of Microarray Technology","year":2015,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Computational biology; Computer science; Biology","score_opus":0.05760980712769457,"score_gpt":0.43276271236153535,"score_spread":0.37515290523384076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2438966953","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000117403586,0.029167956,0.89366436,0.00030075514,0.00013878648,0.00054249406,0.00009150773,0.00005111543,0.07592565],"genre_scores_gemma":[0.00024162282,0.0021274928,0.9761643,0.00020290712,0.000064593776,0.000037611455,0.0002703272,0.00008718085,0.02080398],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99831325,0.00013087169,0.00053646584,0.00067853543,0.000068372225,0.00027249783],"domain_scores_gemma":[0.9983358,0.000021949389,0.00035383637,0.0010242469,0.00020716734,0.000056997593],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0005871708,0.0003567819,0.0006116245,0.0002994203,0.000020148818,0.000002940988,0.00045368169,0.0014020626,0.000023228637],"category_scores_gemma":[0.00017238209,0.00035745848,0.00018836481,0.000109181645,0.0004774283,8.435922e-7,0.00040705956,0.00035214782,0.0000053919366],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001563211,0.000018272945,0.000011056327,0.000025602272,0.00004420625,0.0000054642123,0.0000022136173,0.0000031079871,0.82555187,0.14674065,0.00037426793,0.027207687],"study_design_scores_gemma":[0.00014214069,0.00017769163,6.3953985e-7,0.000050679715,0.000021644655,0.000024705854,0.0000022004042,0.0000019662955,0.35728133,0.18440405,0.45766252,0.00023043134],"about_ca_topic_score_codex":0.0000050053322,"about_ca_topic_score_gemma":0.00000797287,"teacher_disagreement_score":0.4682705,"about_ca_system_score_codex":0.000037061465,"about_ca_system_score_gemma":0.00012419217,"threshold_uncertainty_score":0.9998943},"labels":[],"label_agreement":null},{"id":"W2439832058","doi":"10.1007/978-1-0716-1138-8_3","title":"Definitions of Bias in Clinical Research","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Clinical Reasoning and Diagnostic Skills","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Psychology; Computer science","score_opus":0.4844115607422507,"score_gpt":0.6084546793884437,"score_spread":0.12404311864619294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2439832058","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0055258153,0.013759327,0.06701967,0.0021423257,0.0009933106,0.0009707213,0.00007752569,0.000033646626,0.90947765],"genre_scores_gemma":[0.0010659865,0.015264544,0.96288854,0.0010401319,0.00019583758,0.000051132698,0.00034755128,0.000082092454,0.019064175],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99433863,0.002933677,0.0014768873,0.00067711197,0.00021455194,0.0003591294],"domain_scores_gemma":[0.93760145,0.06099536,0.00019604847,0.0007565538,0.00030582907,0.00014473489],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.011629525,0.00020462376,0.0013905085,0.0005958383,0.000014263727,0.000003814146,0.0001730546,0.0014085886,0.00045109735],"category_scores_gemma":[0.23741175,0.00018655362,0.0004276107,0.00021353946,0.0007982464,0.0000037548011,0.00024954608,0.0022167398,0.000029832965],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015909951,0.00050662254,0.0143876085,0.00008432709,0.00015733385,0.0019089313,0.00003337697,0.000002323409,0.0024784245,0.8851907,0.00031577624,0.094775446],"study_design_scores_gemma":[0.0036267731,0.0019733105,0.0075830235,0.009695975,0.00021985723,0.00012739708,0.000049071554,0.00003589953,0.0029335895,0.93614674,0.037130933,0.00047741996],"about_ca_topic_score_codex":0.00008359674,"about_ca_topic_score_gemma":0.000047294347,"teacher_disagreement_score":0.8958689,"about_ca_system_score_codex":0.00006452951,"about_ca_system_score_gemma":0.0005771836,"threshold_uncertainty_score":0.99988776},"labels":[],"label_agreement":null},{"id":"W2440285837","doi":"10.1007/978-1-62703-574-3_1","title":"Culturing Fetal Precursor Cells Using Free Floating Serum-Free Conditions","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Neurosphere; In vitro; Cell biology; Fetus; Neural stem cell; Matrix (chemical analysis); Fetal bovine serum; Biology; Chemistry; Biochemistry; Stem cell; Genetics; Adult stem cell; Pregnancy","score_opus":0.02811422724557333,"score_gpt":0.3823086055369999,"score_spread":0.3541943782914266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2440285837","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60748196,0.00073023664,0.38837677,0.0001751107,0.00029622467,0.0006529013,0.00006792904,0.000028198343,0.0021906518],"genre_scores_gemma":[0.089886814,0.00006620725,0.90878785,0.0002879279,0.00015717458,0.000100652935,0.000114656286,0.000065893815,0.0005328455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964265,0.0014272839,0.00046330204,0.000760855,0.00015128011,0.0007707728],"domain_scores_gemma":[0.99832284,0.00008896973,0.00013676548,0.0011486597,0.00014674004,0.00015604404],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00091079785,0.00030792045,0.0003433237,0.00019255278,0.00013362952,0.000049485538,0.0009813854,0.0004508887,0.00016428363],"category_scores_gemma":[0.00084963924,0.00030240996,0.00017870683,0.00027280103,0.0002518228,0.000011053427,0.0011151523,0.0003551751,0.000038603215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010790966,0.000055629716,0.00097517326,0.000029869594,0.00006207921,0.000013792014,0.000035552886,0.00038160424,0.9961291,0.00018777834,0.0002677627,0.0018508931],"study_design_scores_gemma":[0.0008891015,0.00014863892,0.00042590278,0.00002570384,0.000017598039,0.00003800841,0.00008743496,0.0021406172,0.989113,0.0047112694,0.002046328,0.00035639943],"about_ca_topic_score_codex":0.0002124721,"about_ca_topic_score_gemma":0.000033688048,"teacher_disagreement_score":0.5204111,"about_ca_system_score_codex":0.000058885355,"about_ca_system_score_gemma":0.00008777605,"threshold_uncertainty_score":0.9999428},"labels":[],"label_agreement":null},{"id":"W2441051170","doi":"10.1007/978-1-60761-646-7_4","title":"Detection of Changes in Global Genome Methylation Using the Cytosine-Extension Assay","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"DNA methylation; Methylation; Cytosine; CpG site; Illumina Methylation Assay; Genome; DNA; Biology; Chromatin; Epigenomics; Molecular biology; Methylated DNA immunoprecipitation; Computational biology; Genetics; Gene; Gene expression","score_opus":0.0236066928126604,"score_gpt":0.3788169593267266,"score_spread":0.3552102665140662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2441051170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.517781,0.00078421435,0.48097858,0.00005287638,0.00017944972,0.00013801779,0.0000039342663,0.0000026483485,0.00007925877],"genre_scores_gemma":[0.77899885,0.00009643172,0.22072186,0.000059092094,0.00006631321,0.0000134398215,0.000027097778,0.000012186339,0.0000047008384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978722,0.0011637431,0.0003099905,0.00035653642,0.0000722903,0.00022527887],"domain_scores_gemma":[0.99925154,0.00006470911,0.00016479197,0.00039557848,0.000093863964,0.00002951432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002477441,0.00014518858,0.00020489775,0.0001145338,0.00003771795,0.0000073060683,0.00017542107,0.00037604236,0.000005250778],"category_scores_gemma":[0.0007128422,0.00011936805,0.000066297194,0.0003473246,0.00012804316,0.0000023352727,0.0001142799,0.00019900002,3.5525417e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033226253,0.00002698098,0.0054576984,0.0000059652725,0.000010780559,0.0000012020705,0.000021134552,0.00067246455,0.97113425,0.00023343391,7.710369e-8,0.022402816],"study_design_scores_gemma":[0.00027503798,0.0001419262,0.014779701,0.000004233748,0.000012395194,0.000005373157,0.000021357824,0.0018363773,0.9785422,0.0033418834,0.0009136668,0.00012584352],"about_ca_topic_score_codex":0.00016974201,"about_ca_topic_score_gemma":0.00110408,"teacher_disagreement_score":0.26121786,"about_ca_system_score_codex":0.000024825915,"about_ca_system_score_gemma":0.000039746737,"threshold_uncertainty_score":0.48676878},"labels":[],"label_agreement":null},{"id":"W2441148870","doi":"10.1007/978-1-61779-160-4_7","title":"Using BRET to Detect Ligand-Specific Conformational Changes in Preformed Signalling Complexes","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"","keywords":"Heterotrimeric G protein; Receptor; G protein-coupled receptor; Chemistry; Cell biology; Signalling; Effector; Ligand (biochemistry); G protein; Biophysics; Biology; Biochemistry","score_opus":0.08308864452948665,"score_gpt":0.37160338839166873,"score_spread":0.28851474386218207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2441148870","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33911842,0.0004225324,0.65977854,0.000016561187,0.00014035216,0.00022718539,0.000007007296,0.000007815873,0.0002815641],"genre_scores_gemma":[0.26859316,0.00006539798,0.7308024,0.000357464,0.000060793504,0.000044187535,0.000041826544,0.000023664852,0.000011091614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99821126,0.00047341906,0.00038729518,0.00042317735,0.000077238234,0.00042760844],"domain_scores_gemma":[0.99949205,0.000033309247,0.00009957128,0.00023238652,0.000059943057,0.00008275778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011770738,0.00021483732,0.00030287445,0.0002647718,0.00004660478,0.000014090201,0.0002772243,0.0002804001,0.00010197733],"category_scores_gemma":[0.00010955601,0.00020488718,0.000074992444,0.00023319188,0.0000634136,0.000004539888,0.00015931414,0.0001550076,0.0000039116658],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009385987,0.000019473224,0.00033695882,0.000009814121,0.000018102606,0.000006410331,0.0002600457,0.00030089673,0.990992,0.001438797,0.0000035260825,0.006520131],"study_design_scores_gemma":[0.00040926848,0.0003025332,0.00017756628,0.000028908718,0.000004449176,0.000017209091,0.000105662104,0.00043558437,0.9914709,0.0048514344,0.0019348668,0.00026163206],"about_ca_topic_score_codex":0.00006941494,"about_ca_topic_score_gemma":0.000091469155,"teacher_disagreement_score":0.07102385,"about_ca_system_score_codex":0.000038297258,"about_ca_system_score_gemma":0.000045718563,"threshold_uncertainty_score":0.8355057},"labels":[],"label_agreement":null},{"id":"W2441193511","doi":"10.1007/978-1-61779-340-0_12","title":"Exploring Host Factors that Impact Reovirus Replication, Dissemination, and Reovirus-Induced Cell Death in Cancer Versus Normal Cells in Culture","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; University of Alberta","funders":"","keywords":"Oncolytic virus; Virology; Biology; Cell culture; Virus; Viral replication; Interferon; Cancer cell; Cell; Apoptosis; Transformation (genetics); Cancer; Gene; Genetics","score_opus":0.15465210735533794,"score_gpt":0.4473179110763282,"score_spread":0.29266580372099027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2441193511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99371433,0.0015500353,0.0036790022,0.000025670039,0.00016843736,0.0004238436,0.000028234212,0.000011347905,0.00039908124],"genre_scores_gemma":[0.97597283,0.0021524744,0.021364028,0.000060807335,0.0000330924,0.00024918234,0.00007189197,0.000046726273,0.00004895691],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996928,0.0011363841,0.00038261962,0.0008708203,0.00011009928,0.0005720999],"domain_scores_gemma":[0.99885887,0.00008562738,0.00013073627,0.0007318721,0.00007378036,0.00011914317],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013516946,0.00031525487,0.00033795577,0.0003386089,0.00004865958,0.000016063881,0.00037739557,0.0003711993,0.00003689268],"category_scores_gemma":[0.00029645406,0.00028631545,0.0000899044,0.00042845478,0.000101080244,0.000018219962,0.00019482912,0.0003813177,0.0000017669469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011908157,0.00009343403,0.08724006,0.000013299184,0.00002630275,0.0000137497855,0.00090939633,0.000016223816,0.90647686,0.000017415121,0.0000061447367,0.003996285],"study_design_scores_gemma":[0.0010649071,0.0012144167,0.04465638,0.000018841603,0.0000082293445,0.0000019196405,0.00023852615,0.000028188404,0.9521718,0.000086395274,0.00020524554,0.0003051246],"about_ca_topic_score_codex":0.0014674604,"about_ca_topic_score_gemma":0.0014591177,"teacher_disagreement_score":0.045694955,"about_ca_system_score_codex":0.00013820568,"about_ca_system_score_gemma":0.00011594788,"threshold_uncertainty_score":0.9999589},"labels":[],"label_agreement":null},{"id":"W2441841725","doi":"10.1007/978-1-61737-985-7_14","title":"Capillary Electrophoresis–Electrospray Ionization-Mass Spectrometry (CE–ESI-MS)-Based Metabolomics","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Metabolomics; Chemistry; Electrospray ionization; Capillary electrophoresis; Capillary electrophoresis–mass spectrometry; Mass spectrometry; Chromatography; Metabolite; Electrospray; Ionization; Ion; Biochemistry; Organic chemistry","score_opus":0.007449817634089668,"score_gpt":0.3152702398977864,"score_spread":0.3078204222636967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2441841725","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25121564,0.004748149,0.7404683,0.00040014787,0.00075473945,0.00037465704,0.000021307167,0.000042657462,0.0019743745],"genre_scores_gemma":[0.17933466,0.0011773988,0.8175134,0.0010717417,0.0003088077,0.00009670729,0.00023750402,0.000097400705,0.00016239788],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959772,0.00096584135,0.00067529833,0.0011725907,0.0001775699,0.0010315027],"domain_scores_gemma":[0.9981397,0.00015438141,0.00026702223,0.0010662638,0.00020081831,0.00017182692],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017915745,0.0005545293,0.00077754754,0.00056571653,0.0001685867,0.000047359747,0.0007024883,0.00072864315,0.00018531633],"category_scores_gemma":[0.0017138609,0.00053698145,0.00032033044,0.0010436298,0.0003361278,0.0000064080923,0.00020523448,0.00079860643,0.0000115933335],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010778591,0.00011876792,0.004716391,0.000013778276,0.00016933141,0.00001614244,0.000008470643,0.000058536098,0.981109,0.012068115,0.00017929332,0.0014343619],"study_design_scores_gemma":[0.00091324124,0.00045133347,0.0011037964,0.000003510206,0.000067022134,0.00002381684,0.000013275923,0.0003092154,0.956577,0.008208337,0.03174105,0.0005883862],"about_ca_topic_score_codex":0.000042437965,"about_ca_topic_score_gemma":0.0001013458,"teacher_disagreement_score":0.07704507,"about_ca_system_score_codex":0.000048910217,"about_ca_system_score_gemma":0.00026989842,"threshold_uncertainty_score":0.9997082},"labels":[],"label_agreement":null},{"id":"W2441875749","doi":"10.1007/7651_2016_355","title":"Bioreactor Expansion of Skin-Derived Precursor Schwann Cells","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"Alberta Innovates","keywords":"Microcarrier; Bioreactor; Suspension culture; Controllability; Regenerative medicine; Schwann cell; Cell culture; Process (computing); Biomedical engineering; Cell biology; Materials science; Cell; Biochemical engineering; Nanotechnology; Process engineering; Chemistry; Computer science; Biology; Stem cell; Engineering; Mathematics; Biochemistry","score_opus":0.03695792123584301,"score_gpt":0.3790620950335442,"score_spread":0.3421041737977012,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2441875749","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4604642,0.00005961136,0.53847826,0.00016062123,0.00039749258,0.0001401977,0.000011993907,0.000016987626,0.00027062197],"genre_scores_gemma":[0.5165828,0.00006288731,0.4828651,0.00023474786,0.00004109307,0.000026299025,0.0000018650385,0.00001770036,0.00016754236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99702775,0.001965831,0.00029918097,0.00040803925,0.00007170439,0.00022749978],"domain_scores_gemma":[0.99906945,0.00040817825,0.00013387101,0.00031662403,0.00003042981,0.00004146801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005851536,0.000127585,0.00022486971,0.00015646487,0.000028154442,0.0000045816,0.00022921013,0.00017891434,0.000054272758],"category_scores_gemma":[0.0007785866,0.00007998918,0.000081291146,0.00021662761,0.00026601163,0.000047243753,0.0000835574,0.00008605257,0.000015737462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003806053,0.00003916795,0.000055581637,0.000006293609,0.0000023948162,0.0000075558087,0.000038504233,0.0000027092954,0.95803976,0.005444115,0.000009232325,0.036316603],"study_design_scores_gemma":[0.00034430544,0.00018647895,0.00006622177,0.000021457552,0.000004380379,0.0000037256693,0.0000041106496,0.000031463467,0.99348575,0.004616285,0.0011210846,0.00011471485],"about_ca_topic_score_codex":0.0000076254128,"about_ca_topic_score_gemma":0.0000013465608,"teacher_disagreement_score":0.056118574,"about_ca_system_score_codex":0.000020095045,"about_ca_system_score_gemma":0.000036282207,"threshold_uncertainty_score":0.32618642},"labels":[],"label_agreement":null},{"id":"W2441995740","doi":"10.1007/978-1-61779-046-1_4","title":"Mapping of Ago2–GW182 Functional Interactions","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Argonaute; Gene silencing; Biology; microRNA; RNA-induced silencing complex; RasiRNA; RNA interference; Cell biology; Genetics; RNA; Gene","score_opus":0.0688776267362875,"score_gpt":0.41087747760859666,"score_spread":0.34199985087230916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2441995740","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3199445,0.00030457543,0.6755995,0.00002840614,0.00014681122,0.00008403198,0.0000034447232,0.0000049220685,0.0038838184],"genre_scores_gemma":[0.31039888,0.000057007997,0.6884928,0.00019341527,0.000058235262,0.00004111878,0.000047020552,0.00001885532,0.0006927017],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998587,0.000527659,0.00027227806,0.0002977674,0.000053172516,0.00026214012],"domain_scores_gemma":[0.9994489,0.00003881549,0.00007716445,0.00030174706,0.00007661151,0.000056769455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007175604,0.0001116973,0.00017564971,0.0001892734,0.000029152528,0.0000029826952,0.00018421133,0.00013617524,0.00012580228],"category_scores_gemma":[0.00039115676,0.0001065579,0.000105966144,0.00018863058,0.00013663851,0.000002426368,0.00015372827,0.00016037778,0.000004861817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006514603,0.000055555647,0.0069220457,0.000008853642,0.000047286278,0.000005459096,0.0000502292,0.000009590324,0.9813629,0.001322844,0.00005058936,0.010099552],"study_design_scores_gemma":[0.000337782,0.00020368595,0.0060123946,0.000011821467,0.000004258056,0.00002270864,0.00013058445,0.00012552593,0.98512393,0.0023434747,0.005553703,0.00013015557],"about_ca_topic_score_codex":0.00009973265,"about_ca_topic_score_gemma":0.000026519503,"teacher_disagreement_score":0.012893255,"about_ca_system_score_codex":0.00001267118,"about_ca_system_score_gemma":0.000054065742,"threshold_uncertainty_score":0.4345305},"labels":[],"label_agreement":null},{"id":"W2442042973","doi":"10.1007/978-1-4939-0844-8_5","title":"A Whole-Plant Screening Test to Identify Genotypes with Superior Freezing Tolerance","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Turfgrass Adaptation and Management","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Freezing tolerance; Biology; Perennial plant; Genotype; Population; Selection (genetic algorithm); Persistence (discontinuity); Identification (biology); Horticulture; Botany; Genetics; Engineering; Demography; Computer science; Machine learning","score_opus":0.018383906910609874,"score_gpt":0.3399351384550447,"score_spread":0.3215512315444348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442042973","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09532198,0.000028547463,0.9025489,0.00048600743,0.00006531348,0.00019563265,0.0000033204485,0.000039948303,0.0013103515],"genre_scores_gemma":[0.16452454,0.0000019607562,0.83354634,0.0017393971,0.000012833538,0.00004288438,0.000006561916,0.000012924868,0.00011258334],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986952,0.00037091994,0.000176739,0.00038268667,0.000095815005,0.0002786518],"domain_scores_gemma":[0.9995058,0.000121555866,0.000043796364,0.00025033441,0.000005506081,0.00007298619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084918883,0.00012767427,0.0001741166,0.000071984614,0.000054925596,0.000023925206,0.00023458958,0.000054881904,0.00012348623],"category_scores_gemma":[0.00021923769,0.000106464286,0.000027484431,0.0002588769,0.00008467399,0.000037297294,0.00018514319,0.000102009224,0.00007901888],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014791815,0.00002357407,0.039812885,0.0000041216686,0.000006526541,0.0000151902805,0.00018274988,0.0056214365,0.9021621,0.00070677884,0.000074582924,0.051375296],"study_design_scores_gemma":[0.0015443872,0.00081454957,0.5099849,0.000084789775,0.00004157879,0.00003208755,0.0003047952,0.02437061,0.123565026,0.0030363665,0.33522958,0.0009913606],"about_ca_topic_score_codex":0.00035014213,"about_ca_topic_score_gemma":0.00054024445,"teacher_disagreement_score":0.77859706,"about_ca_system_score_codex":0.000036534042,"about_ca_system_score_gemma":0.000003092783,"threshold_uncertainty_score":0.43414876},"labels":[],"label_agreement":null},{"id":"W2442085826","doi":"10.1007/978-1-59745-385-1_4","title":"Modeling Longitudinal Data, II: Standard Regression Models and Extensions","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Statistical Methods and Bayesian Inference","field":"Mathematics","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Longitudinal data; Outcome (game theory); Generalized linear model; Linear regression; Regression analysis; Statistics; Linear model; Generalized linear mixed model; Regression; Mixed model; Econometrics; Computer science; Mathematics; Data mining","score_opus":0.3665390658237885,"score_gpt":0.5666947209346396,"score_spread":0.2001556551108511,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442085826","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[4.978656e-7,0.4828835,0.516437,0.000009588547,0.00012171028,0.00028561763,0.00014257286,0.000023885537,0.000095643045],"genre_scores_gemma":[1.0609392e-7,0.4951002,0.50472456,0.000013415223,0.00002657396,0.00003345157,0.000054880842,0.000039050614,0.000007747649],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9927034,0.0042357603,0.0011239032,0.0012478413,0.0001710932,0.00051802956],"domain_scores_gemma":[0.9950559,0.002904272,0.00028798878,0.0015037608,0.000100045814,0.00014801431],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024803167,0.0005997672,0.0028790894,0.00032930553,0.00018049109,0.000023070052,0.0007130783,0.000799404,0.00003166583],"category_scores_gemma":[0.0055950535,0.00042405567,0.00019617449,0.0003325915,0.00027677327,0.000058800662,0.0015002346,0.0009426263,0.0000015161078],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000810003,0.00003185877,4.973785e-7,0.0012945397,0.00005569333,0.00012546715,0.000023717052,0.000003214765,0.00001600738,0.15084071,0.00004876418,0.8475514],"study_design_scores_gemma":[0.00018181544,0.00011730357,5.3008442e-8,0.0052368916,0.00033340388,0.00034300724,0.0000065216104,0.040007897,0.000006121872,0.9080678,0.04517628,0.0005228686],"about_ca_topic_score_codex":0.00002774448,"about_ca_topic_score_gemma":0.000004988647,"teacher_disagreement_score":0.84702855,"about_ca_system_score_codex":0.000068012116,"about_ca_system_score_gemma":0.00023424675,"threshold_uncertainty_score":0.9998211},"labels":[],"label_agreement":null},{"id":"W2442100581","doi":"10.1007/978-1-59745-066-9_4","title":"Application of Multi-PRINS to Simultaneously Identify Chromosomes 18, X, and Y in Prenatal Diagnosis","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Metaphase; Prins reaction; Fluorescence in situ hybridization; Aneuploidy; Biology; Molecular biology; Chromosome; Centromere; Genetics; Karyotype; In situ; Interphase; Chemistry; Biochemistry; Gene","score_opus":0.03754413478977066,"score_gpt":0.41314602473862005,"score_spread":0.3756018899488494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442100581","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5330396,0.0007828504,0.4656733,0.00010226489,0.00002594511,0.00029663453,0.000009114502,0.000013400089,0.00005682868],"genre_scores_gemma":[0.56551915,0.00013660647,0.43409175,0.00013818861,0.000008642836,0.00007455741,0.000015532585,0.000008043474,0.000007555391],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988604,0.0002811966,0.00029554102,0.0003080921,0.000063014835,0.00019174296],"domain_scores_gemma":[0.99891925,0.0006526509,0.000057264813,0.00024627818,0.000039262977,0.00008528962],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037145225,0.00011314171,0.00033601373,0.00022067725,0.000016104643,0.0000019746794,0.00009749374,0.00015998092,0.000007884323],"category_scores_gemma":[0.0028795395,0.0001064884,0.000037884587,0.00029558034,0.00012897099,0.000014019196,0.00013030042,0.00015405338,0.0000030737556],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001097395,0.00025948888,0.63053745,0.000075270436,0.00002345469,0.0003044675,0.00030467648,0.00048780307,0.30246297,0.00016408901,0.000009033661,0.06526158],"study_design_scores_gemma":[0.0022325444,0.0004931379,0.39359215,0.00016393837,0.00003615818,0.00021411793,0.000051626044,0.0068251924,0.59495646,0.0004851667,0.00070468907,0.00024484738],"about_ca_topic_score_codex":0.00039933866,"about_ca_topic_score_gemma":0.000065934575,"teacher_disagreement_score":0.29249346,"about_ca_system_score_codex":0.00003056919,"about_ca_system_score_gemma":0.000025486223,"threshold_uncertainty_score":0.43424708},"labels":[],"label_agreement":null},{"id":"W2442785998","doi":"10.1007/978-1-4939-3299-3_17","title":"C. elegans Methods to Study PTEN","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"PTEN; Function (biology); Mutant; Biology; Model organism; Computational biology; Cell biology; Gene; Genetics; PI3K/AKT/mTOR pathway; Signal transduction","score_opus":0.04516842916293279,"score_gpt":0.4342004566447054,"score_spread":0.3890320274817726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442785998","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2208751,0.0007678205,0.7762284,0.0002415582,0.0005111731,0.00054374465,0.000004990105,0.000026625068,0.0008005692],"genre_scores_gemma":[0.13145,0.00001703305,0.86644125,0.0014975253,0.00014205834,0.00010540952,0.000030865,0.00006074077,0.00025511862],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9942177,0.0035883568,0.0005041325,0.00093911384,0.00013504118,0.000615641],"domain_scores_gemma":[0.99832976,0.000058591704,0.00009921183,0.0010255527,0.00016744832,0.00031944245],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.004259236,0.00035682647,0.0004847506,0.0002211615,0.00005417053,0.00002946883,0.0006917498,0.00035926342,0.000022909171],"category_scores_gemma":[0.0013501489,0.0003517601,0.00012396956,0.00035776207,0.00011351796,0.0000028130235,0.00057648635,0.00025438267,0.000025769214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006792724,0.00027466283,0.008653994,0.000004707364,0.000094063704,0.000024703384,0.0011249436,0.00050052267,0.955587,0.00026007806,0.00019025398,0.03321714],"study_design_scores_gemma":[0.0015399923,0.0019878848,0.0019026309,0.0000047176813,0.00006279501,0.0000380935,0.0009030437,0.00022961714,0.9445164,0.006106151,0.042033974,0.0006746661],"about_ca_topic_score_codex":0.00014341941,"about_ca_topic_score_gemma":0.000078828816,"teacher_disagreement_score":0.09021284,"about_ca_system_score_codex":0.000042456973,"about_ca_system_score_gemma":0.00012019804,"threshold_uncertainty_score":0.9998934},"labels":[],"label_agreement":null},{"id":"W2442903189","doi":"10.1007/978-1-4939-3512-3_6","title":"Photo Control of Protein Function Using Photoactive Yellow Protein","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Mental Health","keywords":"Chromophore; Protein function; Blue light; Function (biology); Nanotechnology; Scaffold; Chemistry; Computational biology; Biophysics; Biological system; Computer science; Materials science; Biochemistry; Cell biology; Biology; Optoelectronics; Photochemistry; Gene","score_opus":0.06388225656525658,"score_gpt":0.42419631975763755,"score_spread":0.36031406319238096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442903189","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36543334,0.000052164654,0.6330767,0.000023158365,0.00007793522,0.0008376996,0.000016712194,0.000011909567,0.00047037512],"genre_scores_gemma":[0.85720325,0.0000057731354,0.14232334,0.00010253587,0.000018484494,0.00021237029,4.7741594e-7,0.00002234488,0.00011141409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99569666,0.0029284346,0.00030684308,0.0005013003,0.00015897467,0.0004078028],"domain_scores_gemma":[0.9990791,0.0003201386,0.00013038046,0.00033003316,0.00007134067,0.00006902468],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011371839,0.00015626756,0.00029938316,0.00024605848,0.00003894631,0.000007346737,0.0002880751,0.00018279828,0.00016620793],"category_scores_gemma":[0.0019923854,0.00011151704,0.00009309726,0.00037177108,0.00038168536,0.000039242306,0.000095310854,0.0001717711,0.000007312637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033650993,0.00006687824,0.00018131308,0.000011866126,0.000010654972,0.000007978165,0.000024087914,0.000007159408,0.9860752,0.0016103573,3.583039e-7,0.011667626],"study_design_scores_gemma":[0.0010263284,0.00036688894,0.00003469537,0.000038231894,0.0000068577147,0.0000035525934,0.000008152323,0.0006724946,0.9844584,0.0127017,0.00054706796,0.00013566508],"about_ca_topic_score_codex":0.00006664767,"about_ca_topic_score_gemma":0.000003171667,"teacher_disagreement_score":0.4917699,"about_ca_system_score_codex":0.00007643781,"about_ca_system_score_gemma":0.00008997837,"threshold_uncertainty_score":0.45475328},"labels":[],"label_agreement":null},{"id":"W2442989256","doi":"10.1007/978-1-61779-046-1_14","title":"An Efficient System for Let-7 MicroRNA and GW182 Protein-Mediated Deadenylation In Vitro","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"microRNA; Biology; Psychological repression; Cell biology; In vitro; Computational biology; Messenger RNA; Genetics; Gene expression; Gene","score_opus":0.01894904652444195,"score_gpt":0.33132049158434174,"score_spread":0.3123714450598998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442989256","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55562437,0.00056826434,0.4430493,0.000015301557,0.000059515303,0.0006178312,0.000017499138,0.000011582336,0.00003633357],"genre_scores_gemma":[0.60808825,0.0000030298183,0.39146772,0.000036162368,0.00002647017,0.0001677218,0.000185837,0.00002122089,0.000003616417],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789786,0.000840071,0.00035663004,0.0005520722,0.000042641634,0.0003107134],"domain_scores_gemma":[0.9993602,0.000028829756,0.00012431997,0.00034504622,0.00006492158,0.00007665192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010210124,0.0001871204,0.00023576137,0.00017496636,0.00003274229,0.000009605913,0.00016331597,0.00034461988,0.0000027634603],"category_scores_gemma":[0.00023120915,0.00019006258,0.00005839543,0.00014287658,0.00010528514,0.000002974431,0.00006764083,0.000086863605,0.0000010949803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003421376,0.00008297527,0.000755767,0.00006185526,0.000017360044,0.000005504284,0.00007612489,0.00006880288,0.9946961,0.0004337992,0.0000010369405,0.003458556],"study_design_scores_gemma":[0.000960941,0.00020756444,0.0022810572,0.000021974254,0.0000126411105,0.000011217497,0.000057541387,0.0034462682,0.99219376,0.00029769266,0.00029787957,0.00021143735],"about_ca_topic_score_codex":0.00004878529,"about_ca_topic_score_gemma":0.000013056365,"teacher_disagreement_score":0.052463874,"about_ca_system_score_codex":0.000048358655,"about_ca_system_score_gemma":0.00004691028,"threshold_uncertainty_score":0.77505267},"labels":[],"label_agreement":null},{"id":"W2442994112","doi":"10.1007/978-1-4939-3378-5_7","title":"Nuclear RNA Isolation and Sequencing","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Polyadenylation; Biology; RNA; Transcriptome; Genetics; DNA sequencing; Deep sequencing; Gene; Post-transcriptional regulation; Computational biology; Gene expression; Genome","score_opus":0.04146395960723569,"score_gpt":0.40554194952109557,"score_spread":0.36407798991385987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2442994112","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07349252,0.0017927114,0.92183536,0.00019011213,0.00018788644,0.00024066842,0.0000034802147,0.00001987531,0.002237374],"genre_scores_gemma":[0.20100923,0.00019464278,0.79758966,0.00079310854,0.00010950504,0.00003700641,0.00005523005,0.00006762739,0.00014399772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977616,0.0009561383,0.0002520108,0.00054454367,0.00010486005,0.0003808261],"domain_scores_gemma":[0.9992488,0.000023861456,0.000067089335,0.00039754133,0.00010090772,0.00016180325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014381616,0.00018154345,0.00021267428,0.00016818606,0.000040562336,0.00002299771,0.0002064025,0.00038400042,0.000014304663],"category_scores_gemma":[0.00076878374,0.00019039601,0.000059466118,0.0002179948,0.0001395604,0.000004013759,0.0003067664,0.00025026026,0.000007135862],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007047373,0.000012577827,0.00006898074,0.0000069013327,0.000026983542,0.000016396565,0.00007499883,0.00022490557,0.9848626,0.0023250955,0.000069902504,0.012240147],"study_design_scores_gemma":[0.0010868924,0.00057443907,0.00003232405,0.000013951152,0.00001401473,0.000083122904,0.000181437,0.0036988086,0.9683516,0.007474847,0.018170541,0.00031804282],"about_ca_topic_score_codex":0.00007367692,"about_ca_topic_score_gemma":0.000018549827,"teacher_disagreement_score":0.1275167,"about_ca_system_score_codex":0.00008923517,"about_ca_system_score_gemma":0.0001511138,"threshold_uncertainty_score":0.77641237},"labels":[],"label_agreement":null},{"id":"W2443205705","doi":"10.1007/978-1-4939-2336-6_9","title":"Quantifying GPCR Internalization: A Focus on the Kisspeptin Receptor","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Children’s Health Research Institute; Western University","funders":"","keywords":"Internalization; G protein-coupled receptor; Receptor; Cell biology; HEK 293 cells; Biology; Signal transduction; Biochemistry","score_opus":0.07885364537945097,"score_gpt":0.40479830378054393,"score_spread":0.325944658401093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2443205705","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09353552,0.00095230126,0.90231013,0.0006628531,0.0005459591,0.00022413398,0.00000398905,0.000015817028,0.0017493019],"genre_scores_gemma":[0.4603772,0.00011136056,0.5368468,0.0019258071,0.00029766106,0.000098246324,0.00007901303,0.000058742422,0.0002051324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972991,0.0015169972,0.00031428755,0.00045681078,0.00010130175,0.0003115402],"domain_scores_gemma":[0.9991841,0.00008183124,0.00011311716,0.0004474864,0.00008658718,0.000086915905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021332772,0.00020345645,0.00021844223,0.00008646274,0.000051325736,0.000027155545,0.00038796262,0.00025636033,0.00012348808],"category_scores_gemma":[0.00101876,0.0001473153,0.00011358219,0.00019479216,0.00008809319,0.0000025494273,0.00016841768,0.00020342781,0.000022107928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071732014,0.000036724916,0.000532872,0.0000027293747,0.000030035828,0.000004518875,0.00010059583,0.00012986778,0.9635462,0.02943872,0.0002958198,0.005810188],"study_design_scores_gemma":[0.00038208574,0.00049994653,0.000009593085,0.000021706872,0.0000065067493,0.000010278273,0.00022893236,0.00026784133,0.95729387,0.0075294813,0.03354738,0.00020236091],"about_ca_topic_score_codex":0.00004028177,"about_ca_topic_score_gemma":0.000013882877,"teacher_disagreement_score":0.36684167,"about_ca_system_score_codex":0.000029996125,"about_ca_system_score_gemma":0.00005916178,"threshold_uncertainty_score":0.6007343},"labels":[],"label_agreement":null},{"id":"W2443346675","doi":"10.1007/978-1-4939-2874-3_6","title":"Murine Whole-Blood Opsonophagocytosis Assay to Evaluate Protection by Antibodies Raised Against Encapsulated Extracellular Bacteria","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Complement system in diseases","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Microbiology; Bacteria; Effector; Antibody; Extracellular; Titer; Biology; Antibody titer; Whole blood; Immunology; Chemistry; Biochemistry","score_opus":0.04791320649465971,"score_gpt":0.37459637007110713,"score_spread":0.32668316357644744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2443346675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7100542,0.00570424,0.28100744,0.00039187964,0.0010034513,0.001380024,0.00011100095,0.00014192965,0.00020582136],"genre_scores_gemma":[0.7730154,0.000036756173,0.22251077,0.00047158805,0.000059687416,0.00091778557,0.0012409062,0.00010048885,0.0016466237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9899429,0.0075996653,0.00080222567,0.0008671461,0.00006985698,0.00071817363],"domain_scores_gemma":[0.9985675,0.0001630569,0.00024925673,0.00070376485,0.0002040315,0.000112381545],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0038939484,0.00042987123,0.00074288895,0.00040063594,0.00010590449,0.000028590111,0.0004891687,0.0004505712,0.00030639165],"category_scores_gemma":[0.0016842651,0.0004089447,0.00015098824,0.00046429425,0.0001837448,0.00005993344,0.00033023293,0.00033221272,0.00023990238],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025843552,0.0002616058,0.001718866,0.000028045748,0.00027975475,0.00002282774,0.00019394838,0.00006165469,0.98703784,0.000078002675,0.0006279037,0.009431092],"study_design_scores_gemma":[0.0037107675,0.0004987704,0.0018365076,0.00006424385,0.000098259734,0.000033209515,0.0001286069,0.00008525676,0.96358293,0.0005280442,0.02895085,0.00048253973],"about_ca_topic_score_codex":0.00017110888,"about_ca_topic_score_gemma":0.0000058792493,"teacher_disagreement_score":0.06296118,"about_ca_system_score_codex":0.00012783289,"about_ca_system_score_gemma":0.00010857357,"threshold_uncertainty_score":0.99983627},"labels":[],"label_agreement":null},{"id":"W2443718182","doi":"10.1007/978-1-61779-231-1_8","title":"In Vitro Assay for ABA 8′-Hydroxylase: Implications for Improved Assays for Cytochrome P450 Enzymes","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"","keywords":"In vitro; Enzyme; Cytochrome P450; Microsome; Abscisic acid; Biochemistry; In vitro toxicology; Biology; Chemistry; Gene","score_opus":0.03809211909227772,"score_gpt":0.37897274539166864,"score_spread":0.3408806262993909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2443718182","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0041187885,0.0018432452,0.9908571,0.0006685735,0.0001878816,0.0017298037,0.00043899077,0.000012765324,0.00014282278],"genre_scores_gemma":[0.023682043,0.000063884174,0.9697687,0.00071493705,0.00022539178,0.0029861608,0.0020626364,0.000044706263,0.00045155015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828994,0.00029891238,0.00037909308,0.0005929377,0.00001956424,0.0004195439],"domain_scores_gemma":[0.999171,0.00015788687,0.0001280632,0.00036507758,0.00011977245,0.000058200498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011712818,0.00022169335,0.00033035464,0.000117150455,0.00007466841,0.000009785985,0.00027012877,0.00049647863,0.0000035593666],"category_scores_gemma":[0.0007459538,0.00020113382,0.00019126812,0.00010582377,0.00008031608,0.000005625611,0.000056175915,0.00008372007,5.3258515e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028289756,0.00008901609,0.000025837337,0.00002844973,0.000053505486,5.1427463e-7,0.00004476373,0.000007940401,0.98673433,0.005130088,0.00067569094,0.0069269775],"study_design_scores_gemma":[0.0012336571,0.00040947896,0.000104020706,0.0000044626076,0.00003156693,0.000013036302,0.000012212474,0.00050007546,0.925571,0.010218551,0.061651256,0.00025063465],"about_ca_topic_score_codex":0.000052531173,"about_ca_topic_score_gemma":0.00019734267,"teacher_disagreement_score":0.061163273,"about_ca_system_score_codex":0.0000328007,"about_ca_system_score_gemma":0.000101191676,"threshold_uncertainty_score":0.8201999},"labels":[],"label_agreement":null},{"id":"W2443885732","doi":"10.1007/978-1-62703-110-3_1","title":"Comparison Between Agrobacterium-Mediated and Direct Gene Transfer Using the Gene Gun","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"","keywords":"Agrobacterium; Gene gun; Transgene; Transformation (genetics); Biology; Gene; Gene transfer; Genetically modified crops; Agrobacterium tumefaciens; Genome; Festuca arundinacea; Plasmid; Genetics; Botany","score_opus":0.0485699703608727,"score_gpt":0.38710171537033267,"score_spread":0.33853174500946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2443885732","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58932227,0.008139638,0.4020602,0.00008481517,0.00014754794,0.00014282693,0.000023598419,0.0000070090546,0.000072093186],"genre_scores_gemma":[0.7964802,0.0002918261,0.20173475,0.00030513198,0.00042178994,0.000021517682,0.00067017577,0.000025057545,0.000049553877],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980402,0.0010081974,0.00026567324,0.0002950527,0.000048738864,0.00034216157],"domain_scores_gemma":[0.99953806,0.000055076038,0.00004679322,0.00025327454,0.000029231454,0.00007758287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084348646,0.00018647437,0.00028426756,0.000047850353,0.000083124556,0.000013022944,0.00015183922,0.00033422295,0.0000062199647],"category_scores_gemma":[0.00010376966,0.0001289347,0.00006314993,0.00011348614,0.0001423889,0.000004069106,0.00007624156,0.00014253681,0.0000013901815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000152235425,0.000024576451,0.028570557,0.0000049201285,0.00006549703,0.0000014623711,0.00011739475,0.00003194368,0.9687205,0.000035327066,0.000029425268,0.0023831928],"study_design_scores_gemma":[0.00026149297,0.00007306037,0.0042398027,0.0000037769485,0.00005282637,0.000034493034,0.000019993195,0.00010076294,0.96947545,0.000019586332,0.025533877,0.00018488755],"about_ca_topic_score_codex":0.00008087994,"about_ca_topic_score_gemma":0.000043444692,"teacher_disagreement_score":0.20715794,"about_ca_system_score_codex":0.0000140931525,"about_ca_system_score_gemma":0.00002818759,"threshold_uncertainty_score":0.52578044},"labels":[],"label_agreement":null},{"id":"W2444006342","doi":"10.1007/978-1-62703-511-8_12","title":"Angiogenic Nanodelivery Systems for Myocardial Therapy","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrospun Nanofibers in Biomedical Applications","field":"Materials Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biocompatible material; Angiogenesis; Medicine; Nanotechnology; Computer science; Engineering; Biomedical engineering; Internal medicine; Materials science","score_opus":0.02088261231777339,"score_gpt":0.36537893141575345,"score_spread":0.34449631909798006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2444006342","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05888184,0.0040568155,0.93475777,0.00033900482,0.0006063495,0.001055705,0.000015386693,0.000062186205,0.00022493987],"genre_scores_gemma":[0.011638552,0.00018590743,0.9852779,0.00065972906,0.00010794248,0.0020184687,0.000022774062,0.000024734349,0.00006397427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979227,0.000777834,0.00033839696,0.00043350118,0.00007969498,0.00044783775],"domain_scores_gemma":[0.9989258,0.00043152628,0.00009002836,0.00039213142,0.000089816094,0.000070669106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013473762,0.00014808188,0.00030596482,0.00011469389,0.00006167348,0.000032938013,0.00040737755,0.00024128676,0.000100198165],"category_scores_gemma":[0.00010665583,0.00012198777,0.00012487125,0.00026724843,0.00020971113,0.00003472885,0.00007047962,0.00007801523,0.00007768851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010091949,0.000030339084,0.000073953226,0.000005888259,0.0000141251685,5.563942e-7,0.000018699451,0.000009268364,0.9835725,0.007497541,0.0003661367,0.008400891],"study_design_scores_gemma":[0.00050099584,0.0001737287,0.000091601134,0.0000055764212,0.000008025555,0.000008336503,0.000012212765,0.0006164936,0.9532489,0.032533403,0.01260921,0.00019147678],"about_ca_topic_score_codex":0.00017228888,"about_ca_topic_score_gemma":7.7969685e-7,"teacher_disagreement_score":0.050520144,"about_ca_system_score_codex":0.000058631565,"about_ca_system_score_gemma":0.000048675658,"threshold_uncertainty_score":0.49745166},"labels":[],"label_agreement":null},{"id":"W2444671267","doi":"10.1007/978-1-59745-512-1_4","title":"Cloth-Based Hybridization Array System for the Identification of Antibiotic Resistance Genes in Salmonella","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Amplicon; Salmonella enterica; Biology; Salmonella; Multiplex polymerase chain reaction; Polymerase chain reaction; Microbiology; Virulence; Multiplex; Gene; Pathogen; Antibiotic resistance; Bacteria; Genetics; Antibiotics","score_opus":0.03336260132611109,"score_gpt":0.35626223244706917,"score_spread":0.3228996311209581,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2444671267","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39045194,0.0016695083,0.60692644,0.00029103854,0.0002142526,0.00035413445,0.000011024722,0.000015108481,0.00006655404],"genre_scores_gemma":[0.9251378,0.00004327288,0.074563704,0.00012444981,0.000051443312,0.000021458793,0.000040811356,0.0000018529581,0.000015204961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975994,0.001048515,0.00068843545,0.00033032123,0.000051918712,0.00028140107],"domain_scores_gemma":[0.997253,0.002234134,0.00029425285,0.000125347,0.00006950101,0.000023792827],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0057026953,0.00011588713,0.00029024918,0.000047051264,0.00004965252,0.000006706399,0.00027834668,0.00017483468,0.0000031604568],"category_scores_gemma":[0.00061312516,0.000048194917,0.000091060894,0.00047808557,0.00012523441,0.000013890073,0.00001861563,0.00008054359,9.204334e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007857135,0.000028210674,0.02962757,0.000026106516,0.0000061067253,0.0000017260218,0.000013118498,0.0001273701,0.94794816,0.0021759386,0.0000033455053,0.019963797],"study_design_scores_gemma":[0.0001877367,0.000071099115,0.111580424,0.000026460011,0.0000116990295,0.0000021317155,0.00016207511,0.00051752274,0.8844789,0.0015946217,0.0012575177,0.00010980188],"about_ca_topic_score_codex":0.00013054113,"about_ca_topic_score_gemma":0.00042210473,"teacher_disagreement_score":0.53468585,"about_ca_system_score_codex":0.00004259901,"about_ca_system_score_gemma":0.00000931157,"threshold_uncertainty_score":0.19764517},"labels":[],"label_agreement":null},{"id":"W2460536673","doi":"10.1007/978-1-4939-2687-9_16","title":"Analysis of Nuclease Activity of Cas1 Proteins Against Complex DNA Substrates","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Nuclease; Holliday junction; DNA; RecBCD; Endonuclease; Escherichia coli; Biology; Chemistry; Gene; Biochemistry; Computational biology; Genetics; DNA repair","score_opus":0.03850996858642323,"score_gpt":0.4322244509636225,"score_spread":0.39371448237719925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460536673","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5975234,0.00031071057,0.4017095,0.00001582996,0.000032902717,0.00010559125,0.000022044136,0.0000037941347,0.00027623682],"genre_scores_gemma":[0.769575,0.000022594746,0.23025659,0.000029951327,0.0000135758255,0.000011888519,0.00006959122,0.000012285107,0.000008520087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862605,0.00046578256,0.00031439244,0.00031241056,0.00006890567,0.00021248052],"domain_scores_gemma":[0.9992194,0.000031202344,0.00013094996,0.0004319434,0.00010655912,0.00007995077],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074080913,0.00015308357,0.00043630978,0.00023487442,0.000009801314,0.00000290122,0.00020516202,0.00019489224,0.000008539318],"category_scores_gemma":[0.00035333325,0.00015143512,0.00017933795,0.00048657652,0.00014802277,0.0000015547258,0.00011603122,0.00008392611,3.5039565e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006444635,0.00008392618,0.006426952,0.000020272553,0.00031719048,0.000004111263,0.000050187606,0.0048244987,0.98111755,0.000082873354,0.0000067322285,0.0070012673],"study_design_scores_gemma":[0.00038114493,0.00023006956,0.0070814015,0.0000046963137,0.00011436538,0.0000017216388,0.000048151145,0.0025973304,0.98880893,0.00012048123,0.00046498174,0.00014672942],"about_ca_topic_score_codex":0.00010900651,"about_ca_topic_score_gemma":0.00008076043,"teacher_disagreement_score":0.17205161,"about_ca_system_score_codex":0.000012519894,"about_ca_system_score_gemma":0.000058900485,"threshold_uncertainty_score":0.6175345},"labels":[],"label_agreement":null},{"id":"W2460550459","doi":"10.1007/978-1-4939-3299-3_8","title":"Rapid Detection of Dynamic PTEN Regulation in Living Cells Using Intramolecular BRET","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"","keywords":"PTEN; PI3K/AKT/mTOR pathway; Phosphatase; Suppressor; Protein kinase B; Cancer research; Signal transduction; Function (biology); Cell biology; Chemistry; Biology; Gene; Phosphorylation; Biochemistry","score_opus":0.027502840807040563,"score_gpt":0.3752394433045403,"score_spread":0.3477366024974997,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460550459","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3808925,0.0017439636,0.6167496,0.000015745105,0.0003060418,0.00017632562,0.000004011255,0.0000084367575,0.00010341484],"genre_scores_gemma":[0.7179741,0.000049373142,0.28174892,0.00009950034,0.000041459207,0.000019571893,0.000020835281,0.000034998007,0.000011204584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966739,0.0017086411,0.00054928154,0.0005727148,0.000118276854,0.0003771882],"domain_scores_gemma":[0.99898773,0.00007222707,0.0002338128,0.0005018492,0.00012777821,0.00007659747],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022302466,0.00023387463,0.00036669942,0.00030732813,0.00002079234,0.000009529654,0.0002727774,0.0004952922,0.0000106164425],"category_scores_gemma":[0.0007358549,0.00025998516,0.00010969684,0.0004187684,0.00016964381,0.0000060726734,0.00018008387,0.00022033816,0.0000011980676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007872782,0.000046697318,0.0006247195,0.00002069283,0.000030533527,0.0000073582332,0.00008384766,0.003665749,0.97367525,0.000051793322,0.0000030520746,0.021711605],"study_design_scores_gemma":[0.00055783516,0.00032065343,0.0004564132,0.00005396213,0.00001974639,0.000020741472,0.000054393757,0.015787954,0.9799503,0.0019323811,0.00058044423,0.0002651431],"about_ca_topic_score_codex":0.0001595021,"about_ca_topic_score_gemma":0.00007352842,"teacher_disagreement_score":0.33708167,"about_ca_system_score_codex":0.00015509229,"about_ca_system_score_gemma":0.00014578538,"threshold_uncertainty_score":0.9999852},"labels":[],"label_agreement":null},{"id":"W2460642590","doi":"10.1007/978-1-4939-2687-9_13","title":"Procedures for Generating CRISPR Mutants with Novel Spacers Acquired from Viruses or Plasmids","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"CRISPR; Plasmid; Computational biology; Biology; Streptococcus thermophilus; Trans-activating crRNA; Genome editing; Genetics; Bacteriophage; Bacteria; DNA; Gene; Escherichia coli","score_opus":0.04633891567250576,"score_gpt":0.44171905485625723,"score_spread":0.3953801391837515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460642590","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23326509,0.0008782619,0.76515967,0.000051665073,0.0001960742,0.0003099321,0.000060713384,0.000019109468,0.00005948051],"genre_scores_gemma":[0.09560552,0.000025689462,0.9032492,0.0005491006,0.00018442795,0.00015986768,0.00010129621,0.000056018147,0.000068863155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984793,0.00016126221,0.00028212767,0.00059056643,0.0000770517,0.0004096603],"domain_scores_gemma":[0.99926275,0.00008161541,0.000081440005,0.0003505222,0.000100143625,0.0001235243],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004949447,0.00026985942,0.00030974817,0.000085283034,0.000040570063,0.00002203067,0.000236341,0.00028552653,0.0000069748116],"category_scores_gemma":[0.0011043455,0.00021382695,0.00006809396,0.00014812658,0.00010400792,0.0000032078353,0.00011450408,0.000077265046,7.246223e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004571735,0.000043869346,0.0011656628,0.000019024827,0.00008811908,0.000007733907,0.00010381887,0.0042021526,0.99124134,0.00006744406,0.000117682954,0.002485986],"study_design_scores_gemma":[0.0018825211,0.0007596021,0.000112403955,0.000023371866,0.000033131524,0.000026288333,0.0002446366,0.0029702224,0.9856719,0.00022772898,0.007695677,0.00035251168],"about_ca_topic_score_codex":0.000060255843,"about_ca_topic_score_gemma":0.00022222145,"teacher_disagreement_score":0.13808954,"about_ca_system_score_codex":0.000025943633,"about_ca_system_score_gemma":0.00021964687,"threshold_uncertainty_score":0.871961},"labels":[],"label_agreement":null},{"id":"W2460665847","doi":"10.1007/978-1-4939-3387-7_12","title":"Designing Efficacious Vesicular Stomatitis Virus-Vectored Vaccines Against Ebola Virus","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Vesicular stomatitis virus; Ebola virus; Virology; Vesicular Stomatitis; Ebolavirus; Ebola vaccine; Virus; Vaccination; Immunization; Vesicular stomatitis Indiana virus; Biology; Filoviridae; Immunology; Immune system; Viral disease; Paramyxoviridae","score_opus":0.03024509051477282,"score_gpt":0.4142686029867685,"score_spread":0.3840235124719957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460665847","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24694684,0.00073241454,0.75032216,0.0005060818,0.00018950444,0.00038298607,0.0000088707075,0.00008967687,0.0008214658],"genre_scores_gemma":[0.34452662,0.0004915782,0.6533977,0.0009037098,0.00015356555,0.00014862174,0.000019884003,0.00006986558,0.00028846448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99680185,0.001604491,0.00041259348,0.0004971945,0.0001326618,0.0005512221],"domain_scores_gemma":[0.9987834,0.00041344904,0.00008007482,0.00044737378,0.000117378666,0.00015830687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013830451,0.0002392369,0.0005304358,0.00044422067,0.000082860344,0.000016021455,0.00015958518,0.00029892102,0.00015727912],"category_scores_gemma":[0.0011747408,0.00015928777,0.00017992799,0.00046631735,0.00014687644,0.000040186766,0.00012688786,0.00028527074,0.0000696847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006580713,0.00008734742,0.0017027381,0.000018066225,0.00007316903,0.00023050846,0.00003182052,0.000007678771,0.8456543,0.00027954028,0.000057374906,0.15179166],"study_design_scores_gemma":[0.0018580992,0.0005055496,0.005319528,0.00010291904,0.00003559068,0.000092789254,0.000015648235,0.0001719641,0.98415875,0.00075463066,0.006756585,0.000227923],"about_ca_topic_score_codex":0.00016381763,"about_ca_topic_score_gemma":0.000039214192,"teacher_disagreement_score":0.15156373,"about_ca_system_score_codex":0.00013479507,"about_ca_system_score_gemma":0.00008611109,"threshold_uncertainty_score":0.6495567},"labels":[],"label_agreement":null},{"id":"W2460788473","doi":"10.1007/978-1-61779-609-8_1","title":"A Taxonomist’s View on Genomic Authentication","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Authentication (law); Identification (biology); Hierarchy; Computer science; Organism; Taxonomy (biology); Biology; Computational biology; Data science; Computer security; Zoology; Genetics; Ecology; Political science","score_opus":0.03388813030137783,"score_gpt":0.367233305962883,"score_spread":0.3333451756615052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460788473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49925515,0.001402062,0.49590683,0.00018235188,0.00050382636,0.00023182451,0.000011057729,0.000010822775,0.0024960483],"genre_scores_gemma":[0.557823,0.000057170615,0.44067398,0.0009467459,0.00012145276,0.000021847214,0.000109666675,0.000014101143,0.00023202127],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867684,0.0005500978,0.00018369836,0.00026953916,0.00003957168,0.00028024876],"domain_scores_gemma":[0.9994683,0.000019814119,0.00007203031,0.00034405157,0.000021839913,0.000073908],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057360023,0.00013616004,0.00014965131,0.000079398604,0.000039048788,0.0000070555093,0.00017954396,0.00023277871,0.0000768021],"category_scores_gemma":[0.00013198095,0.000134541,0.00007724171,0.00008728456,0.000064750784,0.0000017638974,0.000100756595,0.00009999045,0.000034601442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003216264,0.00004004329,0.014213102,0.0000065402564,0.000024032093,5.5965353e-7,0.000055295834,0.00006775642,0.9619455,0.0077668494,0.00008551955,0.015762638],"study_design_scores_gemma":[0.00084221526,0.00026562496,0.057491943,0.000010491651,0.000038290545,0.000022407385,0.00006230172,0.000053863776,0.5564791,0.003966321,0.380302,0.00046542022],"about_ca_topic_score_codex":0.000008949228,"about_ca_topic_score_gemma":0.0000030799995,"teacher_disagreement_score":0.4054664,"about_ca_system_score_codex":0.000019672789,"about_ca_system_score_gemma":0.000025535204,"threshold_uncertainty_score":0.5486422},"labels":[],"label_agreement":null},{"id":"W2460797750","doi":"10.1007/978-1-61779-436-0_1","title":"Isolation of Fetal Gonads from Embryos of Timed-Pregnant Mice for Morphological and Molecular Studies","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Royal Victoria Hospital","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institutes of Health; U.S. Department of Veterans Affairs","keywords":"Embryo; Isolation (microbiology); Andrology; Biology; Fetus; Cell biology; Pregnancy; Medicine; Genetics; Bioinformatics","score_opus":0.04805148814458455,"score_gpt":0.3810764047800533,"score_spread":0.33302491663546874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460797750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6622793,0.0043032346,0.33285928,0.000029091181,0.00007689334,0.0001686257,0.00003203454,0.0000034236368,0.00024815017],"genre_scores_gemma":[0.56150967,0.0002658765,0.43797466,0.00012819831,0.000014301527,0.000026935622,0.000036689187,0.000008280292,0.000035403733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861175,0.00034835993,0.00047087728,0.00034638974,0.00004921385,0.00017340157],"domain_scores_gemma":[0.9993168,0.00012308666,0.00018645912,0.00020322774,0.00012846412,0.00004192917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042874974,0.0001518381,0.00038088515,0.000052990268,0.000018799565,0.0000020034488,0.00016427864,0.000248804,0.000021667936],"category_scores_gemma":[0.00044613323,0.00012784376,0.00011925368,0.00005951374,0.0004060959,0.000002492191,0.0001523557,0.00006637473,3.4336185e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014675621,0.00009127267,0.0015914675,0.00003649058,0.00010345515,0.0000051400684,0.00013972548,0.000003413021,0.9884296,0.0014233689,0.00000530322,0.008024025],"study_design_scores_gemma":[0.0007114766,0.0010993715,0.0022243832,0.00002695546,0.00004655848,0.000007802681,0.0003933873,0.00011876724,0.97712636,0.0179361,0.00015710741,0.00015170287],"about_ca_topic_score_codex":0.000032420758,"about_ca_topic_score_gemma":0.000006275752,"teacher_disagreement_score":0.105115384,"about_ca_system_score_codex":0.0000042992065,"about_ca_system_score_gemma":0.000022560087,"threshold_uncertainty_score":0.5213317},"labels":[],"label_agreement":null},{"id":"W2460825465","doi":"10.1007/978-1-62703-360-2_9","title":"iTRAQ-Labeling for Biomarker Discovery","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Canadian Institutes of Health Research; Canadian Institute for Theoretical Astrophysics","keywords":"Biomarker discovery; Biomarker; Proteomics; Proteome; Computational biology; Mass spectrometry; Computer science; Bioinformatics; Chemistry; Biology; Chromatography; Biochemistry","score_opus":0.029617971083671396,"score_gpt":0.42030306180564075,"score_spread":0.39068509072196933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2460825465","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018332459,0.00028845426,0.97913325,0.0002749266,0.000026515228,0.00029142536,0.000014949165,0.00005814659,0.0015798599],"genre_scores_gemma":[0.0057973494,0.00003584782,0.99216974,0.00022652361,0.000020913722,0.0014093674,0.000037849208,0.000023089999,0.0002792918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991686,0.000055675984,0.00022289157,0.0002934049,0.000020538235,0.00023891326],"domain_scores_gemma":[0.9993706,0.00019041164,0.00006573321,0.0003104213,0.00003356963,0.000029310346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026603427,0.000112532485,0.00016452609,0.000046275243,0.000036628044,0.000016659853,0.00019404208,0.00017661274,0.00008988834],"category_scores_gemma":[0.00018065372,0.00010457336,0.00007391348,0.00009162504,0.0000655356,0.000040743555,0.00007251288,0.00012208614,0.0000040291948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004532213,0.000019623445,0.0002466425,0.000015722258,0.000009039227,3.767495e-7,0.000005101185,0.000006438202,0.9377428,0.016643004,0.000023668834,0.045282997],"study_design_scores_gemma":[0.0001535771,0.000009149144,0.000008977889,0.000008075087,0.000004527983,0.0000020424022,0.000010837195,0.0009751032,0.7735112,0.21764408,0.0075573483,0.000115096555],"about_ca_topic_score_codex":0.000034845,"about_ca_topic_score_gemma":0.0000010234037,"teacher_disagreement_score":0.20100108,"about_ca_system_score_codex":0.00002997311,"about_ca_system_score_gemma":0.000013139714,"threshold_uncertainty_score":0.4264378},"labels":[],"label_agreement":null},{"id":"W2461407363","doi":"10.1007/978-1-60761-646-7_16","title":"cDNA Libraries for Virus-Induced Gene Silencing","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"","keywords":"Gene silencing; Gene knockdown; Functional genomics; Complementary DNA; Biology; Insert (composites); Gene; Computational biology; Genetics; cDNA library; Suppression subtractive hybridization; Gene knockout; Genomics; Genome; Engineering","score_opus":0.07173261606251244,"score_gpt":0.39656099383907534,"score_spread":0.3248283777765629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461407363","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97721374,0.0002984832,0.020507557,0.00075876137,0.00033282326,0.00034678922,0.00014887007,0.000053934527,0.0003390166],"genre_scores_gemma":[0.14418353,0.00008196301,0.8542986,0.0007072678,0.00029046816,0.00024225687,0.000116236755,0.0000031612844,0.00007650321],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842364,0.00046856623,0.00020963968,0.00037264766,0.000069106405,0.00045642164],"domain_scores_gemma":[0.9985004,0.0012493716,0.00005400491,0.000084014646,0.000044137752,0.000068061505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011628133,0.00014475425,0.00026192263,0.000033619905,0.00014085427,0.000031913816,0.00037138825,0.00020949166,0.000079074554],"category_scores_gemma":[0.0015305339,0.000058263366,0.00009231945,0.000259461,0.00012921894,0.000046702324,0.00020862857,0.0002834079,0.0000062693216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024065013,0.000023364595,0.00037333003,0.000003038963,0.000012979851,0.0000057501475,0.000031350708,3.9228348e-7,0.92578137,0.0021338302,0.000047737947,0.07156281],"study_design_scores_gemma":[0.000109609275,0.00018978825,0.0025199093,0.0000030788713,0.0000038063745,0.0000045372944,0.00003652997,0.00008249562,0.9702666,0.01565496,0.010980507,0.00014819556],"about_ca_topic_score_codex":0.00022168049,"about_ca_topic_score_gemma":0.00059502793,"teacher_disagreement_score":0.8337911,"about_ca_system_score_codex":0.000009909146,"about_ca_system_score_gemma":0.000015017714,"threshold_uncertainty_score":0.2375911},"labels":[],"label_agreement":null},{"id":"W2461474485","doi":"10.1007/978-1-60327-565-1_15","title":"Isolation Independent Methods of Characterizing Phage Communities 1: Strain Typing Using Fingerprinting Methods","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pulsed-field gel electrophoresis; Biology; Genome; Isolation (microbiology); Temperature gradient gel electrophoresis; Computational biology; Genetic diversity; Genetics; Gene; Microbiology; Genotype; Population; 16S ribosomal RNA","score_opus":0.049807674838905046,"score_gpt":0.43128130116469576,"score_spread":0.38147362632579074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461474485","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22514553,0.00008758741,0.77342916,0.000071633614,0.00021139512,0.00013789379,0.000004706607,0.000019781543,0.0008922801],"genre_scores_gemma":[0.096822195,0.000015516842,0.9025909,0.0004940503,0.000018447474,0.000005206926,0.0000120118275,0.000015482798,0.000026187625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947871,0.003980534,0.00055982865,0.00027889712,0.00005043445,0.0003431861],"domain_scores_gemma":[0.9989276,0.00035930038,0.00031243224,0.0003375582,0.000018669762,0.000044435503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00409965,0.00019566326,0.0003907298,0.00016913681,0.00011174794,0.00002643773,0.00030209243,0.00021391756,0.00046863145],"category_scores_gemma":[0.00023192904,0.00020312752,0.00012385989,0.00031443877,0.00014476854,0.00014960801,0.00027051143,0.00045669224,0.0000031250804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000067399537,0.000034519122,0.0005254514,0.0000049579858,0.000011271102,0.0000015805447,0.00061428006,0.00019133907,0.7189809,0.0001350381,2.598921e-7,0.2794937],"study_design_scores_gemma":[0.00024936965,0.0001101009,0.029773107,0.00006606886,0.00003308046,0.000041737585,0.0005111586,0.010344213,0.95448625,0.0027895747,0.0013019617,0.00029336606],"about_ca_topic_score_codex":0.0006386305,"about_ca_topic_score_gemma":0.000021457645,"teacher_disagreement_score":0.27920032,"about_ca_system_score_codex":0.00012663189,"about_ca_system_score_gemma":0.000013535481,"threshold_uncertainty_score":0.82833},"labels":[],"label_agreement":null},{"id":"W2461540424","doi":"10.1007/978-1-60761-925-3_18","title":"Photosystem II Reconstitution into Proteoliposomes and Methodologies for Structure–Function Characterization","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Photosystem II; Liposome; Chemistry; Thylakoid; Vesicle; Biophysics; Lipid bilayer; Characterization (materials science); Bilayer; Membrane; Biochemistry; Photosynthesis; Biology; Materials science; Chloroplast; Nanotechnology","score_opus":0.017628045198936487,"score_gpt":0.3606228234116235,"score_spread":0.342994778212687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461540424","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40388408,0.00008232845,0.59497124,0.00006567584,0.00047574088,0.00046049766,0.000018303148,0.000013497129,0.000028631632],"genre_scores_gemma":[0.35543674,0.00004607046,0.64378446,0.00018995236,0.00008241583,0.00023096087,0.00018499182,0.000016371714,0.00002806611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859506,0.00036128497,0.00026596498,0.00050267205,0.000037142825,0.00023790018],"domain_scores_gemma":[0.9994054,0.000050326307,0.0001371106,0.00027236415,0.00008613697,0.000048695394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010297635,0.00018650776,0.0002487801,0.00010831318,0.000119637,0.00001611383,0.0001452893,0.00043876495,0.000008699608],"category_scores_gemma":[0.0010096099,0.00016660098,0.000058503712,0.00009544938,0.00014121276,0.000006520055,0.00013661904,0.00015279527,2.1198633e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012224168,0.000013762815,0.00009379774,0.000052799554,0.000024396053,4.0679768e-7,0.00003935939,0.0000019431793,0.953872,0.007915176,6.988268e-7,0.037863385],"study_design_scores_gemma":[0.00041110744,0.0004440404,0.00007607166,0.000010017027,0.000021847805,0.000033512875,0.000026592254,0.00015569018,0.9463092,0.041514702,0.010810706,0.00018653092],"about_ca_topic_score_codex":0.00001553919,"about_ca_topic_score_gemma":0.000046494155,"teacher_disagreement_score":0.048813213,"about_ca_system_score_codex":0.000009042863,"about_ca_system_score_gemma":0.000065230866,"threshold_uncertainty_score":0.6793791},"labels":[],"label_agreement":null},{"id":"W2461585974","doi":"10.1007/978-1-60761-362-6_16","title":"Introduction of shRNAs into Primary NK Cells with Lentivirus","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Transduction (biophysics); Small hairpin RNA; Biology; Gene silencing; Primary cell; Progenitor cell; Cell biology; Lentivirus; Transgene; RNA interference; Haematopoiesis; Viral vector; Janus kinase 3; Gene delivery; Genetic enhancement; Interleukin 21; Cell culture; Stem cell; Virology; Gene; T cell; Immunology; Immune system; RNA; Genetics; Virus; Gene knockdown; Recombinant DNA","score_opus":0.00900998218794248,"score_gpt":0.32546332073792644,"score_spread":0.316453338549984,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461585974","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43831584,0.0010062944,0.559507,0.00021917044,0.00014194821,0.00012573818,0.0000026050745,0.0000066174234,0.00067480933],"genre_scores_gemma":[0.33186576,0.00036796668,0.6663508,0.0008313388,0.00020756348,0.000015921445,0.000111670946,0.000019478664,0.00022947825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985056,0.00045311803,0.0002884449,0.00045678494,0.00006183275,0.00023420673],"domain_scores_gemma":[0.999319,0.000013870088,0.00011756743,0.00042874532,0.00008343692,0.00003738585],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005186921,0.0001729375,0.0002748973,0.00012370035,0.00002173199,0.000006114785,0.00023020816,0.00021849168,0.00002066391],"category_scores_gemma":[0.00006426423,0.00014911703,0.000083949795,0.0001684931,0.00014179279,0.0000036269766,0.000069931964,0.00013096136,0.000004093733],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020104376,0.00008069924,0.00040336003,0.000012852153,0.000035920144,0.0000061001583,0.0000321863,0.00011732249,0.94618076,0.00026911907,0.00018794523,0.052472703],"study_design_scores_gemma":[0.0003705232,0.0013276474,0.0006117633,0.000009539131,0.000016035503,0.0000133619615,0.000024138973,0.000016802654,0.9897617,0.0014697056,0.0062044994,0.00017430063],"about_ca_topic_score_codex":0.000024612533,"about_ca_topic_score_gemma":0.0000085592055,"teacher_disagreement_score":0.10684382,"about_ca_system_score_codex":0.00001822275,"about_ca_system_score_gemma":0.000053055555,"threshold_uncertainty_score":0.6080816},"labels":[],"label_agreement":null},{"id":"W2461686874","doi":"10.1007/978-1-59259-993-6_12","title":"New Approaches to Fluorescence In Situ Hybridization","year":2006,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Fluorescence in situ hybridization; Comparative genomic hybridization; Fish <Actinopterygii>; Biology; Karyotype; Cytogenetics; Hybridization probe; In situ hybridization; Computational biology; Molecular cytogenetics; In situ; Interphase; Chromosome; DNA; Genetics; Gene; Chemistry; Fishery","score_opus":0.03175108915833243,"score_gpt":0.3064223136328651,"score_spread":0.2746712244745327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461686874","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2364633,0.0002574394,0.76068807,0.000298422,0.000088576504,0.00017394095,0.0000036911797,0.0000072706057,0.0020193302],"genre_scores_gemma":[0.4141177,0.0000087036005,0.58526117,0.00013201826,0.00007579334,0.000028311952,0.000087704335,0.0000120857485,0.00027651357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986006,0.00039422166,0.00028913375,0.0003937603,0.00004076909,0.00028151102],"domain_scores_gemma":[0.99960256,0.000017145507,0.0000482065,0.00027062214,0.000014409474,0.00004707903],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044750515,0.0001428425,0.00016977843,0.00014165953,0.000022506563,0.000013747045,0.00019687197,0.00016437341,0.000012514078],"category_scores_gemma":[0.000094390394,0.00014813791,0.000048522692,0.00024201661,0.000031557374,0.0000025152628,0.00012489108,0.00008108516,0.000006011263],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017649107,0.0000348155,0.013722824,0.00000515248,0.000005576078,0.000004831679,0.000039826955,0.001586172,0.96313393,0.0155981425,0.00007620773,0.005774872],"study_design_scores_gemma":[0.00040540769,0.00010873077,0.010326697,0.000007494863,0.000004663914,0.000012300176,0.000039619223,0.000083931816,0.9750298,0.0074662394,0.0062828828,0.00023219368],"about_ca_topic_score_codex":0.0003705281,"about_ca_topic_score_gemma":0.00028403488,"teacher_disagreement_score":0.1776544,"about_ca_system_score_codex":0.000029570923,"about_ca_system_score_gemma":0.00007586951,"threshold_uncertainty_score":0.6040889},"labels":[],"label_agreement":null},{"id":"W2461905697","doi":"10.1007/978-1-4939-3115-6_1","title":"Suppressor Screens in Arabidopsis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Arabidopsis; Suppressor; Genetic screen; Mutagenesis; Biology; Ethyl methanesulfonate; Computational biology; Signal transduction; Cell biology; Genetics; Gene; Mutant","score_opus":0.07936418700076815,"score_gpt":0.400031650003947,"score_spread":0.3206674630031789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2461905697","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9756657,0.0009019278,0.016986767,0.0020492906,0.00016525331,0.00037911342,0.00003779229,0.000047668724,0.0037664976],"genre_scores_gemma":[0.6310561,0.000064264466,0.36673275,0.0013993512,0.00011126337,0.00015065074,0.00026736295,0.0000049287605,0.00021336476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955991,0.0028464275,0.00031244312,0.0005181443,0.0001116562,0.0006122246],"domain_scores_gemma":[0.9991694,0.00044329357,0.00005342681,0.00012848956,0.000055672048,0.00014968259],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026562833,0.00017586847,0.00034802884,0.000087915956,0.000026083988,0.00001558665,0.00052392104,0.0003537647,0.00008144581],"category_scores_gemma":[0.0012654364,0.00007783923,0.00007769791,0.00070519344,0.00017441003,0.00002889262,0.00026080044,0.00036342425,0.00003665855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052708216,0.000061887724,0.04799617,0.000001395753,0.000007462726,0.00012499875,0.000024664978,0.000010939491,0.92627,0.00081216905,0.00006390676,0.024573712],"study_design_scores_gemma":[0.002306411,0.0016788015,0.14351034,0.000054774,0.000018121278,0.00021806445,0.0005118082,0.0015486024,0.7320914,0.056740846,0.06001835,0.0013024424],"about_ca_topic_score_codex":0.00058864144,"about_ca_topic_score_gemma":0.0008865312,"teacher_disagreement_score":0.349746,"about_ca_system_score_codex":0.00005336127,"about_ca_system_score_gemma":0.00002543936,"threshold_uncertainty_score":0.31741914},"labels":[],"label_agreement":null},{"id":"W2462137971","doi":"10.1007/978-1-59745-427-8_9","title":"Bridging the Gene-to-Function Knowledge Gap Through Functional Genomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Genetic and Mutation Studies","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Bridging (networking); Functional genomics; Genomics; Computational biology; Gene; Function (biology); Biology; Genetics; Computer science; Genome","score_opus":0.0735926617249707,"score_gpt":0.3624925102861579,"score_spread":0.2888998485611872,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2462137971","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3175819,0.0011968944,0.67568064,0.0025178387,0.00033094035,0.00017616605,0.000008511918,0.000028648436,0.0024784727],"genre_scores_gemma":[0.6946195,0.0002178077,0.29329357,0.010652468,0.0006356121,0.00006400391,0.000103001985,0.0000021651902,0.0004119136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988588,0.0004524939,0.0001733674,0.00025467481,0.00004400412,0.00021662541],"domain_scores_gemma":[0.9996296,0.00020734117,0.000042540803,0.00005192044,0.000040211547,0.000028343922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056880707,0.0001057034,0.00014228633,0.000014440015,0.00014816846,0.000013800218,0.00013575511,0.00007872905,0.000035744342],"category_scores_gemma":[0.00010115616,0.00003888933,0.00005969732,0.0002811662,0.0000476905,0.000014734162,0.000056640747,0.00009707564,0.000028391096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001796437,0.00001717518,0.00030170457,3.415927e-7,0.000008791691,0.0000010536921,0.00008182614,0.000094262665,0.8173924,0.0026446627,0.00019496947,0.17924482],"study_design_scores_gemma":[0.0004603836,0.0009325398,0.2759961,0.000014196553,0.000058983525,0.00006678156,0.00054086646,0.0007575662,0.34408343,0.111078516,0.26538143,0.0006291986],"about_ca_topic_score_codex":0.000022224505,"about_ca_topic_score_gemma":0.000030807936,"teacher_disagreement_score":0.473309,"about_ca_system_score_codex":0.000024022786,"about_ca_system_score_gemma":0.000008500541,"threshold_uncertainty_score":0.15858608},"labels":[],"label_agreement":null},{"id":"W2462255611","doi":"10.1007/978-1-59745-117-8_11","title":"Analysis of Microdissected Cells by Two-Dimensional LC-MS Approaches","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institute for Theoretical Astrophysics","keywords":"Laser capture microdissection; Proteome; Chemistry; Stain; Chromatography; Liquid chromatography–mass spectrometry; Tandem mass spectrometry; Mass spectrometry; Qualitative analysis; Proteomics; Staining; Molecular biology; Computational biology; Biochemistry; Biology","score_opus":0.03163720720642875,"score_gpt":0.3675941466481492,"score_spread":0.33595693944172045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2462255611","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35942286,0.00019802833,0.6394744,0.000023299946,0.0000059736776,0.0000617223,0.00004734112,0.000026632195,0.00073973427],"genre_scores_gemma":[0.0793143,0.000022062646,0.9202135,0.00005034329,0.0000060273806,0.000079003665,0.00020252877,0.000013780195,0.000098451215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989351,0.00015109731,0.00032425887,0.00035672754,0.000045895507,0.00018689467],"domain_scores_gemma":[0.9992533,0.00013226258,0.00014253925,0.0004005487,0.00003467648,0.000036695503],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024327156,0.000132751,0.0003647026,0.00014647399,0.00003967591,0.0000015837886,0.00021873723,0.00017543464,0.00013684925],"category_scores_gemma":[0.000047100275,0.00012975125,0.00014544585,0.00056752097,0.0001925754,0.000009027564,0.00008560391,0.00014451206,9.1864575e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010824164,0.00008255682,0.0018726978,0.0000062927083,0.0001325888,0.0000027935096,0.00002489345,0.0007661842,0.99518394,0.0006820505,0.000018250481,0.001216899],"study_design_scores_gemma":[0.00015529206,0.000010526124,0.000045488036,0.0000027491537,0.00007648304,0.0000045287256,0.0000055574315,0.005155148,0.9916536,0.0024119117,0.00034856182,0.00013010664],"about_ca_topic_score_codex":0.00007457798,"about_ca_topic_score_gemma":0.0000028928287,"teacher_disagreement_score":0.2807391,"about_ca_system_score_codex":0.00002921111,"about_ca_system_score_gemma":0.000020839983,"threshold_uncertainty_score":0.52911025},"labels":[],"label_agreement":null},{"id":"W2462531281","doi":"10.1007/978-1-62703-694-8_15","title":"Isolation of Zebrafish Gonads for RNA Isolation","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; Ontario Institute for Cancer Research","funders":"","keywords":"Piwi-interacting RNA; Zebrafish; Biology; Germline; Germ plasm; Gonad; Isolation (microbiology); Germ cell; Genetics; RNA; Evolutionary biology; Bioinformatics; Embryo; Anatomy; RNA interference; Gene","score_opus":0.02559932006333641,"score_gpt":0.32935006543670436,"score_spread":0.30375074537336794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2462531281","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45006093,0.00008375927,0.54805326,0.00085076847,0.00010898791,0.00034610063,0.000014689659,0.000012411852,0.00046910203],"genre_scores_gemma":[0.4207634,0.0000047168874,0.578837,0.00015651669,0.00004789126,0.00007633749,0.000066509354,7.1999494e-7,0.000046923404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99914634,0.0002687397,0.00023156467,0.00017754089,0.000031468608,0.00014434209],"domain_scores_gemma":[0.9994431,0.0003136712,0.00008642556,0.000045739635,0.00008525761,0.000025788078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003336028,0.00007145354,0.00014139675,0.000018430237,0.000036403864,0.000008959048,0.000110937806,0.00012711056,0.00025555832],"category_scores_gemma":[0.00022715873,0.000032062795,0.00006895211,0.00020458856,0.000034510118,0.000031350297,0.00003208458,0.000044971417,0.000004237983],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004271668,0.000023859986,0.0032498837,0.0000023243012,0.000004936055,4.904469e-8,0.00002161396,0.000015612302,0.92553544,0.0040001096,0.000009526802,0.0671324],"study_design_scores_gemma":[0.00047409785,0.00076679146,0.21661483,0.000013217656,0.000020316857,0.000003009127,0.000086772954,0.011754922,0.4888048,0.2756611,0.00551172,0.00028843601],"about_ca_topic_score_codex":0.00020289492,"about_ca_topic_score_gemma":0.00008037407,"teacher_disagreement_score":0.43673062,"about_ca_system_score_codex":0.000010100654,"about_ca_system_score_gemma":0.000005210101,"threshold_uncertainty_score":0.27981842},"labels":[],"label_agreement":null},{"id":"W2462618745","doi":"10.1007/978-1-4939-2257-4_26","title":"Integrative Methods for Studying Cardiac Energetics","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cardiovascular Function and Risk Factors","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Energetics; Computer science; Physics; Thermodynamics","score_opus":0.12462651388897523,"score_gpt":0.5287743034131921,"score_spread":0.40414778952421687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2462618745","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[1.853606e-7,0.5033039,0.49364868,0.0000103242355,0.0014103869,0.00121362,0.000020853353,0.00003213409,0.00035992372],"genre_scores_gemma":[1.1030545e-8,0.5011618,0.497731,0.000053068896,0.00013621752,0.00040328718,0.00020424614,0.00006638878,0.00024395443],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98766184,0.009888237,0.0009346382,0.00088771887,0.0001338211,0.00049373606],"domain_scores_gemma":[0.99694663,0.0013342504,0.0002976564,0.0008984305,0.0003119425,0.00021110012],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.008886406,0.0006720163,0.005251949,0.00069153594,0.00004616115,0.000014856158,0.00023775085,0.0011584944,0.00001899404],"category_scores_gemma":[0.003170127,0.0004529628,0.0029691604,0.0007087714,0.00017729508,0.000013487054,0.00018770313,0.00093493017,0.000007290131],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023462078,0.000048576992,0.00002261937,0.0018054046,0.0017484628,0.000016139764,0.00009077284,0.0000012497495,0.00031966114,0.0008126632,0.00017441504,0.9949366],"study_design_scores_gemma":[0.0005677905,0.0003131471,0.0000014594407,0.0011735811,0.0037084166,0.00005834448,0.0001259302,0.00002162518,0.00040491208,0.00083383766,0.9923667,0.00042428623],"about_ca_topic_score_codex":0.00002503376,"about_ca_topic_score_gemma":0.0000012307594,"teacher_disagreement_score":0.99451226,"about_ca_system_score_codex":0.00042298375,"about_ca_system_score_gemma":0.0006311936,"threshold_uncertainty_score":0.9997922},"labels":[],"label_agreement":null},{"id":"W2462655360","doi":"10.1007/978-1-61779-145-1_2","title":"Migratory Strategies of Normal and Malignant Stem Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"Canadian Institutes of Health Research","keywords":"Homing (biology); Stem cell; Progenitor cell; Biology; Cell biology; Endothelial stem cell; Mesenchymal stem cell; Stromal cell; Clinical uses of mesenchymal stem cells; Stem cell transplantation for articular cartilage repair; Adult stem cell; Haematopoiesis; Cancer stem cell; Immunology; Cancer research; Genetics","score_opus":0.046589222774949375,"score_gpt":0.36780610716436213,"score_spread":0.32121688438941276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2462655360","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5583132,0.005861512,0.42980585,0.000026875032,0.0002095923,0.00022659347,0.000009933529,0.000012927257,0.005533535],"genre_scores_gemma":[0.18848366,0.00031818298,0.81094575,0.0001416166,0.000013239411,0.000012455527,0.0000016609988,0.000012125906,0.00007129404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902797,0.00033308208,0.00023210899,0.00019877135,0.00003759463,0.00017047623],"domain_scores_gemma":[0.99960995,0.00004045105,0.00006680489,0.000196178,0.000031990847,0.000054636082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006025177,0.00009815645,0.00032662431,0.00011198859,0.000008259448,0.0000018755111,0.000054215267,0.000102687125,0.00006144315],"category_scores_gemma":[0.0000105887675,0.00007862721,0.000058655893,0.000105339146,0.0001640636,0.000014558074,0.00004678594,0.00010014701,0.0000010045511],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007172851,0.00004749418,0.0035202284,0.00008355199,0.000037663773,0.000049665177,0.00032171325,6.1294935e-7,0.95245665,0.0037141617,0.000007123318,0.039689384],"study_design_scores_gemma":[0.00050347694,0.00035371562,0.0014509397,0.000024843739,0.000054570737,0.00002419841,0.0006118468,0.000007973498,0.9939034,0.0009467354,0.0020459408,0.00007233458],"about_ca_topic_score_codex":0.00023648758,"about_ca_topic_score_gemma":0.000022347549,"teacher_disagreement_score":0.38113993,"about_ca_system_score_codex":0.000010587371,"about_ca_system_score_gemma":0.00007328614,"threshold_uncertainty_score":0.32063243},"labels":[],"label_agreement":null},{"id":"W2463085437","doi":"10.1007/978-1-4939-2569-8_19","title":"Analysis of Connecdenn 1–3 (DENN1A-C) GEF Activity for Rab35","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Rab; GTPase; GTP'; Guanine nucleotide exchange factor; Cell biology; GTP-binding protein regulators; Chemistry; Biochemistry; Small GTPase; Biology; G protein; Biophysics; Signal transduction; Enzyme","score_opus":0.04071227060252101,"score_gpt":0.3925144813048168,"score_spread":0.3518022107022958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463085437","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3422633,0.0005764402,0.65655106,0.000039167688,0.000106818756,0.00017172542,0.000026816755,0.00000495593,0.0002597041],"genre_scores_gemma":[0.6069637,0.00006318809,0.39029008,0.00016003515,0.000060522492,0.00007451486,0.0021862239,0.000028336046,0.00017341596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998437,0.0005068106,0.0003028951,0.00043089568,0.0000658533,0.00025658048],"domain_scores_gemma":[0.999172,0.000058807887,0.00013303394,0.00041488954,0.00013828464,0.00008300477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001456131,0.00016122966,0.00045069994,0.00025598024,0.000017998078,0.0000045525053,0.00020708871,0.00033932258,0.0000135663595],"category_scores_gemma":[0.00036017972,0.00015970944,0.00031261294,0.00040316794,0.00012767957,0.000002143732,0.000054196156,0.00008621123,5.7115403e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024941366,0.00007032359,0.010507053,0.000010489424,0.0004056421,0.0000027124559,0.00005060461,0.00038885124,0.98175055,0.0012655059,0.0000066013995,0.0052922517],"study_design_scores_gemma":[0.0011723376,0.00050088874,0.0020967857,0.0000037276727,0.00041788703,0.0000025047627,0.0000466494,0.0030691372,0.97245145,0.0021993094,0.01778093,0.00025839993],"about_ca_topic_score_codex":0.000058881968,"about_ca_topic_score_gemma":0.000099783065,"teacher_disagreement_score":0.26626098,"about_ca_system_score_codex":0.000017826127,"about_ca_system_score_gemma":0.000073176605,"threshold_uncertainty_score":0.6512762},"labels":[],"label_agreement":null},{"id":"W2463357675","doi":"10.1007/978-1-4939-3182-8_26","title":"Quantitation of Plasma Renin Activity in Plasma Using Liquid Chromatography–Tandem Mass Spectrometry (LC-MS/MS)","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital; University of British Columbia Hospital","funders":"","keywords":"Chromatography; Liquid chromatography–mass spectrometry; Chemistry; Tandem mass spectrometry; Mass spectrometry; Plasma","score_opus":0.07772905270818628,"score_gpt":0.41230644924880305,"score_spread":0.3345773965406168,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463357675","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6858606,0.00025557034,0.31286654,0.00014557688,0.00010238285,0.00016882746,0.0000016167058,0.000015363054,0.0005835473],"genre_scores_gemma":[0.5429575,0.00002063159,0.45693427,0.000041332758,0.000014603659,0.000003920241,0.000008105342,0.000012548361,0.0000071285585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978112,0.0010270457,0.00040395462,0.00032319108,0.00017487003,0.00025975236],"domain_scores_gemma":[0.9991629,0.00021249778,0.00016159842,0.00024472817,0.00011416613,0.00010407997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017149461,0.00016306501,0.00058558374,0.00084069895,0.000017001872,0.000004203845,0.00008314159,0.00031324185,0.000019527253],"category_scores_gemma":[0.0010150489,0.00014876472,0.000110182795,0.0008953902,0.0001329354,0.000042534157,0.000043774347,0.0002610831,0.0000024261722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069069123,0.00010894639,0.016573802,0.000017577166,0.000036688925,0.00007364174,0.000094253395,0.00013830488,0.977091,0.0014559805,0.000004034244,0.0037150476],"study_design_scores_gemma":[0.0028480135,0.0011245444,0.02777504,0.00009921539,0.000053784206,0.000113415255,0.000096305776,0.03211906,0.9331668,0.0019539339,0.00045493495,0.00019495866],"about_ca_topic_score_codex":0.00019806177,"about_ca_topic_score_gemma":0.000052775096,"teacher_disagreement_score":0.14406773,"about_ca_system_score_codex":0.00012347936,"about_ca_system_score_gemma":0.00014372505,"threshold_uncertainty_score":0.6066449},"labels":[],"label_agreement":null},{"id":"W2463501151","doi":"10.1007/978-1-4939-0357-3_14","title":"Monitoring the Proteostasis Function of the Saccharomyces cerevisiae Metacaspase Yca1","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Proteostasis; Saccharomyces cerevisiae; Proteases; Biology; Cell biology; Programmed cell death; Yeast; Budding yeast; Function (biology); Apoptosis; Biochemistry; Enzyme","score_opus":0.015562795371101,"score_gpt":0.3486854465631063,"score_spread":0.3331226511920053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463501151","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5523548,0.0036955022,0.44223142,0.0003333562,0.00045019004,0.0003836855,0.000004639281,0.000006163809,0.0005402468],"genre_scores_gemma":[0.8394,0.0002214494,0.15959695,0.0003462846,0.000198052,0.00009037387,0.0000067346523,0.000023996012,0.00011615872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997432,0.0016100617,0.00029785,0.00031834707,0.00008751765,0.0002542063],"domain_scores_gemma":[0.99896204,0.00006937482,0.00016196733,0.0007055761,0.00007484253,0.000026217387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013120215,0.00016464622,0.00021055197,0.000044243883,0.000086300206,0.0000103646025,0.0004318038,0.00020591637,0.000007650859],"category_scores_gemma":[0.000498716,0.000098641416,0.00016553675,0.00021986237,0.00019157909,0.000001644831,0.00018993499,0.00017431466,0.0000012954326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004458957,0.000019253623,0.0064453157,0.0000181977,0.000048014,3.3479063e-7,0.000025712463,0.000072509625,0.95547056,0.000749222,0.000014854441,0.037091445],"study_design_scores_gemma":[0.00022993657,0.00019894837,0.0075828126,0.000017937678,0.000040911313,0.00000392761,0.000047027006,0.000024921692,0.97329634,0.0026625383,0.015773848,0.000120847064],"about_ca_topic_score_codex":0.000027010286,"about_ca_topic_score_gemma":0.000019097775,"teacher_disagreement_score":0.2870452,"about_ca_system_score_codex":0.000010161433,"about_ca_system_score_gemma":0.000040131676,"threshold_uncertainty_score":0.40224802},"labels":[],"label_agreement":null},{"id":"W2463937655","doi":"10.1007/978-1-61779-539-8_3","title":"Rapid Detection of Aneuploidy Following the Generation of Mutants in Candida albicans","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"Wellcome Trust","keywords":"Candida albicans; Aneuploidy; Mutant; Biology; Multiplex; Genetics; Karyotype; Multiplex polymerase chain reaction; Chromosome; Gene; Polymerase chain reaction","score_opus":0.05268184288987667,"score_gpt":0.4112131443617132,"score_spread":0.35853130147183654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463937655","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7705313,0.001483343,0.22748077,0.000042510623,0.00013437153,0.00016565535,0.0000012471776,0.0000027824753,0.00015804339],"genre_scores_gemma":[0.9447383,0.000047119396,0.05507379,0.00008427517,0.000025749106,0.000010744696,0.000004051474,0.0000059987838,0.000009929268],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99843466,0.00089298974,0.00030669925,0.00012949611,0.00006446402,0.00017167997],"domain_scores_gemma":[0.9995029,0.00014429426,0.000077788405,0.00022291699,0.000027155462,0.000024920286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020494673,0.00006953918,0.0002736184,0.00009753618,0.000014011224,7.222817e-7,0.000053327425,0.00011536243,0.000017246535],"category_scores_gemma":[0.0007639386,0.000048717626,0.000083248546,0.0002587338,0.000088134686,0.000019229848,0.000019410643,0.0001339171,3.0227432e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005061216,0.000047947753,0.17348932,0.00001716963,0.000014828425,0.000002540606,0.00022262594,0.0000031553047,0.8000369,0.00009588181,3.6884217e-7,0.026018616],"study_design_scores_gemma":[0.00038766567,0.00014073773,0.12137315,0.000017306455,0.000026480391,0.0000038407193,0.0001466535,0.00026403947,0.87731797,0.00019017958,0.00008912513,0.000042871252],"about_ca_topic_score_codex":0.0003089546,"about_ca_topic_score_gemma":0.00030670484,"teacher_disagreement_score":0.17420706,"about_ca_system_score_codex":0.00004127398,"about_ca_system_score_gemma":0.000035520454,"threshold_uncertainty_score":0.19866472},"labels":[],"label_agreement":null},{"id":"W2463976374","doi":"10.1007/978-1-4939-2963-4_1","title":"Isolation of Lipid Rafts from Human Neutrophils by Density Gradient Centrifugation","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Lipid raft; Sphingomyelin; Lysis; Immunoprecipitation; Cell biology; Centrifugation; Membrane; Biology; Differential centrifugation; Chemistry; Cell fractionation; Cell membrane; Biochemistry","score_opus":0.021272427480635087,"score_gpt":0.35435206309276984,"score_spread":0.3330796356121348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2463976374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71693784,0.00021596371,0.28217426,0.000051077634,0.000317384,0.0001519915,0.000023905586,0.0000070927254,0.0001204754],"genre_scores_gemma":[0.8191745,0.000021271695,0.17970292,0.00016419389,0.00016092138,0.000013071704,0.0007128933,0.000017602442,0.00003257371],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812114,0.0007768277,0.00036580386,0.0004225181,0.00008120884,0.00023247044],"domain_scores_gemma":[0.9992334,0.00002031082,0.00016952593,0.00037679207,0.00010928121,0.00009068297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005327498,0.000172656,0.00028076026,0.00007594313,0.000027251268,0.000006502732,0.0001891034,0.0003233452,0.000011569474],"category_scores_gemma":[0.00018962726,0.0001635294,0.000091701426,0.00012630149,0.00011249887,0.0000035616267,0.000104007544,0.00012376692,0.0000013666099],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006395435,0.000056798774,0.015382231,0.000004488312,0.000020412086,0.0000020848827,0.000054321074,0.00002148337,0.98246247,0.0001975927,0.0001213257,0.0016128285],"study_design_scores_gemma":[0.0008592601,0.00029349723,0.0023912317,0.0000054395123,0.000028214103,0.000004003616,0.000025731937,0.000029234425,0.9917302,0.0013799635,0.003085979,0.00016721345],"about_ca_topic_score_codex":0.00019080781,"about_ca_topic_score_gemma":0.000025294732,"teacher_disagreement_score":0.10247132,"about_ca_system_score_codex":0.000026666665,"about_ca_system_score_gemma":0.000044527667,"threshold_uncertainty_score":0.66685355},"labels":[],"label_agreement":null},{"id":"W2464524877","doi":"10.1007/978-1-61779-276-2_2","title":"Identification of Mammalian Protein Complexes by Lentiviral-Based Affinity Purification and Mass Spectrometry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Interactome; Computational biology; Proteome; Tandem affinity purification; Proteomics; Identification (biology); Protein–protein interaction; Biology; Genome; Tandem mass spectrometry; Human proteome project; Chemistry; Mass spectrometry; Cell biology; Affinity chromatography; Bioinformatics; Biochemistry; Gene","score_opus":0.026917284949299337,"score_gpt":0.32246397740581517,"score_spread":0.2955466924565158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2464524877","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34338993,0.000621845,0.6554191,0.00003946212,0.000038107977,0.0002915127,0.000018872364,0.00000657885,0.00017459477],"genre_scores_gemma":[0.5250174,0.000020192163,0.4747361,0.00003486037,0.000008975629,0.0000709593,0.000045221605,0.000013885937,0.000052444073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775404,0.0011335002,0.00039823743,0.00043973347,0.000063347645,0.00021116999],"domain_scores_gemma":[0.99925476,0.000022403317,0.00020534589,0.00042361647,0.000051271938,0.00004261985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013679158,0.00016107791,0.00022979453,0.00013354766,0.000033308537,0.000008354841,0.0002298559,0.00025547904,0.000029450273],"category_scores_gemma":[0.00027329245,0.00016291093,0.00006762591,0.00015716137,0.00018063167,0.0000037720351,0.00005133189,0.000084517655,0.0000018073182],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007715574,0.0000792494,0.0011890494,0.00003120985,0.000019770543,0.0000010547569,0.000018981895,0.0000010000067,0.992602,0.0022748702,0.0000051715974,0.0037004766],"study_design_scores_gemma":[0.00028603774,0.0002755151,0.00079202966,0.000008945299,0.0000126254745,0.0000017536296,0.000024541203,0.000043589655,0.98820347,0.009908729,0.00027793497,0.00016483267],"about_ca_topic_score_codex":0.00003634552,"about_ca_topic_score_gemma":0.0000042395477,"teacher_disagreement_score":0.18162744,"about_ca_system_score_codex":0.000009948388,"about_ca_system_score_gemma":0.00002670508,"threshold_uncertainty_score":0.6643315},"labels":[],"label_agreement":null},{"id":"W2464665098","doi":"10.1007/978-1-4939-3753-0_1","title":"Construction of Modular Lentiviral Vectors for Effective Gene Expression and Knockdown","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Gene knockdown; RNA interference; Biology; Small hairpin RNA; Gene silencing; Computational biology; Gene expression; Gene; Viral vector; Genetics; RNA; Recombinant DNA","score_opus":0.010824738758904526,"score_gpt":0.3430747781382393,"score_spread":0.3322500393793347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2464665098","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49477845,0.0005072392,0.50435513,0.00002154876,0.00011338612,0.00017618662,0.000015194366,0.000002650046,0.000030195855],"genre_scores_gemma":[0.5739487,0.00015394288,0.42566767,0.00003856297,0.00004219527,0.00008505861,0.000019422605,0.000012534926,0.000031906304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987329,0.00044810545,0.00021482124,0.0003840355,0.000030884567,0.00018922306],"domain_scores_gemma":[0.9995005,0.00007901499,0.00009539332,0.00022329172,0.00007020131,0.00003159572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004342269,0.00013494736,0.00022097689,0.000089984605,0.000022702783,0.0000031426857,0.00010575812,0.00022691968,0.00000515814],"category_scores_gemma":[0.0003032124,0.00009838334,0.00008793001,0.00005190212,0.0002128047,0.0000033981617,0.00010251593,0.00004187014,4.5787147e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016416506,0.000019314732,0.004734819,0.000013080183,0.000034197074,8.092568e-7,0.000013737821,0.000003896276,0.9315361,0.00031049762,0.00001045764,0.06315893],"study_design_scores_gemma":[0.00079341955,0.00064777455,0.0009767828,0.000028511007,0.000012819599,0.000010002959,0.000015889626,0.000019702182,0.99242485,0.004129346,0.0008111644,0.00012976752],"about_ca_topic_score_codex":0.000008545618,"about_ca_topic_score_gemma":0.0000027293095,"teacher_disagreement_score":0.07917025,"about_ca_system_score_codex":0.000010312621,"about_ca_system_score_gemma":0.000019340083,"threshold_uncertainty_score":0.40119562},"labels":[],"label_agreement":null},{"id":"W2464951964","doi":"10.1007/978-1-60327-009-0_14","title":"Renal and Cardiac Na+–K+-ATPase and Aconitase in a Rat Model of Fetal Programming","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Birth, Development, and Health","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Aconitase; Fetus; Enzyme; ATPase; Internal medicine; Endocrinology; Kidney; Fetal programming; Biology; Chemistry; Medicine; Biochemistry; Pregnancy","score_opus":0.036213947507782916,"score_gpt":0.40658091431067067,"score_spread":0.3703669668028878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2464951964","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7963028,0.0033849662,0.19913113,0.0004751252,0.000042712876,0.00041936184,0.000004323436,0.000011942332,0.00022763797],"genre_scores_gemma":[0.23039785,0.0020172284,0.7670874,0.00044987348,0.000009677968,0.0000151573095,0.000010812504,0.0000070188935,0.000004975307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986978,0.00043191508,0.00029634256,0.0002707598,0.000048149454,0.00025503506],"domain_scores_gemma":[0.9996267,0.000058385114,0.000058141297,0.00013445015,0.000027026039,0.00009529304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012654195,0.00011732264,0.00044267072,0.0001933042,0.000018420116,0.0000033585168,0.00003563097,0.00017147801,0.000001564138],"category_scores_gemma":[0.00019528727,0.00010254411,0.000033921267,0.00015501062,0.000120803685,0.000015111994,0.00003571677,0.00022329821,1.437207e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001602321,0.00007845381,0.019342253,0.00008319008,0.000017186656,0.00005928377,0.00049724535,0.000006519757,0.7534964,0.013078192,0.000003007611,0.213178],"study_design_scores_gemma":[0.015641779,0.004544352,0.06115695,0.0006947278,0.0002711465,0.00025724742,0.0008459372,0.022115583,0.6596526,0.23252225,0.0010569426,0.0012404692],"about_ca_topic_score_codex":0.00003978647,"about_ca_topic_score_gemma":0.000009014878,"teacher_disagreement_score":0.56795627,"about_ca_system_score_codex":0.000028206214,"about_ca_system_score_gemma":0.00011927511,"threshold_uncertainty_score":0.41816273},"labels":[],"label_agreement":null},{"id":"W2465207678","doi":"10.1007/978-1-62703-505-7_11","title":"Novel Methods for the Investigation of Human Hypertrophic Scarring and Other Dermal Fibrosis","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Dermatologic Treatments and Research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Dermis; Decorin; Hypertrophic scar; Fibrosis; Wound healing; Pathology; Fibrillogenesis; Fibroblast; Keloid; Dermal fibroblast; Medicine; CTGF; Reticular Dermis; Chemistry; Anatomy; Growth factor; Surgery; Internal medicine; Proteoglycan; Cartilage","score_opus":0.09054988393253506,"score_gpt":0.4753417161172759,"score_spread":0.38479183218474083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2465207678","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31116715,0.0011996867,0.68587744,0.0009994592,0.000035399058,0.0005800177,0.000002003565,0.000007880693,0.00013094502],"genre_scores_gemma":[0.08349122,0.000015561101,0.91574526,0.0004866354,0.000013871836,0.0001833427,0.0000036460929,0.000012500003,0.000047964128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988136,0.00055373186,0.00021542,0.00019044448,0.000038960003,0.00018780035],"domain_scores_gemma":[0.99904954,0.0005902278,0.00005828631,0.00020024959,0.00005573795,0.000045932295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009116323,0.00009365,0.00026748847,0.00010360243,0.000055579196,0.0000073293977,0.00007942498,0.00012886497,0.000024459245],"category_scores_gemma":[0.0003376667,0.000051955412,0.000060185866,0.00011435522,0.0003095667,0.000013636525,0.00006607494,0.000108802225,4.918307e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012310762,0.000020649699,0.021411663,0.000041621573,0.00006438132,7.8404616e-7,0.00008130028,0.0000019681058,0.92485034,0.0015500924,0.0000056983554,0.05195921],"study_design_scores_gemma":[0.0018696849,0.0004649573,0.064321674,0.000048140893,0.00009594709,0.00009566181,0.00013084649,0.003103535,0.9158498,0.0128000155,0.0011032268,0.00011650855],"about_ca_topic_score_codex":0.00024092312,"about_ca_topic_score_gemma":0.000001733746,"teacher_disagreement_score":0.2298678,"about_ca_system_score_codex":0.0000135507735,"about_ca_system_score_gemma":0.000020422109,"threshold_uncertainty_score":0.21186802},"labels":[],"label_agreement":null},{"id":"W2465397406","doi":"10.1007/978-1-62703-137-0_24","title":"Correlative Optical and Scanning Probe Microscopies for Mapping Interactions at Membranes","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Force Microscopy Techniques and Applications","field":"Physics and Astronomy","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Nanotechnology; Microscopy; Optical imaging; Correlative; Computer science; Scanning probe microscopy; Characterization (materials science); Modalities; Biological system; Materials science; Physics; Biology; Optics","score_opus":0.027741029885267707,"score_gpt":0.4228318077294067,"score_spread":0.395090777844139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2465397406","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.055323843,0.0002932247,0.9423617,0.00013430975,0.00008047068,0.00034897955,0.000014907543,0.000018817424,0.001423718],"genre_scores_gemma":[0.11462277,0.000002851861,0.8846854,0.000057422745,0.000043993972,0.0003394195,0.000028813847,0.000012262888,0.00020709034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992957,0.000099878474,0.00016872195,0.00017669557,0.000013422387,0.0002455978],"domain_scores_gemma":[0.9995748,0.0001919313,0.000058805115,0.00011111587,0.000021911996,0.000041445728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000310924,0.00010384645,0.00016407561,0.0000630052,0.00010315321,0.000011275877,0.00006416607,0.000050513776,0.000035862977],"category_scores_gemma":[0.000021724221,0.000097054464,0.000050155457,0.00008519963,0.00012128869,0.000037802078,0.00009957363,0.00011462883,0.0000019084707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000050657145,0.000028456381,0.014633984,0.000010074763,0.000017549295,4.5460244e-8,0.0003196147,0.0000029238747,0.8859308,0.09297089,0.000019343244,0.0060612555],"study_design_scores_gemma":[0.00023716329,0.00003596868,0.0007716324,0.000032373096,0.000020412748,0.000004325521,0.00033717672,0.00044297177,0.93738496,0.018355872,0.042192508,0.0001846513],"about_ca_topic_score_codex":0.000033952747,"about_ca_topic_score_gemma":0.0000011951862,"teacher_disagreement_score":0.074615024,"about_ca_system_score_codex":0.000025815467,"about_ca_system_score_gemma":0.000008879246,"threshold_uncertainty_score":0.3957766},"labels":[],"label_agreement":null},{"id":"W2465479990","doi":"10.1007/978-1-59745-030-0_12","title":"Characterization of Cardiac Gene Promoter Activity","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Signaling Pathways in Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Promoter; Gene; Biology; Heterologous; Reporter gene; Transcription factor; Gene expression; Transfection; Transcription (linguistics); Context (archaeology); Heterologous expression; Regulation of gene expression; Genetics; Cell biology; Molecular biology; Recombinant DNA","score_opus":0.01863919923403311,"score_gpt":0.36694940012049226,"score_spread":0.34831020088645914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2465479990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5339387,0.00014101017,0.4654679,0.000012550444,0.00013877287,0.0001356158,0.000016570597,0.000005801648,0.00014306264],"genre_scores_gemma":[0.7097876,0.000024437311,0.28975484,0.0001151606,0.00008814578,0.000020543253,0.0001455791,0.00002549052,0.000038206705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831104,0.0006798767,0.0002745997,0.0003876485,0.00006507272,0.00028177164],"domain_scores_gemma":[0.9992571,0.000035389105,0.0001359961,0.00043775648,0.00007172276,0.00006207071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016656608,0.00015196166,0.00024478667,0.000090785165,0.00001767695,0.0000036122537,0.00019440727,0.00028595803,0.000010126888],"category_scores_gemma":[0.00035026314,0.00015516089,0.00012543079,0.00017531439,0.00012672457,0.0000019510023,0.00013141033,0.00010324025,0.000001368423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011336619,0.00007670281,0.0062634335,0.000014372077,0.000039209084,0.0000047507747,0.00002209946,0.0000036322238,0.96929646,0.00013798747,0.0000016782208,0.02402631],"study_design_scores_gemma":[0.00019690547,0.00015397623,0.007912976,0.0000061726696,0.0000143185935,0.0000030934748,0.0000035146074,0.00001188901,0.9896945,0.00038111626,0.0014676532,0.0001539338],"about_ca_topic_score_codex":0.0000089683035,"about_ca_topic_score_gemma":0.0000015098467,"teacher_disagreement_score":0.17584887,"about_ca_system_score_codex":0.000017338623,"about_ca_system_score_gemma":0.000050769926,"threshold_uncertainty_score":0.6327277},"labels":[],"label_agreement":null},{"id":"W2465534381","doi":"10.1007/978-1-60761-925-3_2","title":"Isolation of Photosystem I Submembrane Fractions","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Trois-Rivières","funders":"","keywords":"P700; Photosystem I; Chloroplast; Photosystem II; Cytochrome b6f complex; Chemistry; Biophysics; Chloroplast stroma; Electron transport chain; Photochemistry; Photosynthesis; Biochemistry; Biology; Thylakoid","score_opus":0.011522433789870173,"score_gpt":0.35521789552721333,"score_spread":0.34369546173734317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2465534381","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3743209,0.00008561877,0.623907,0.000034683613,0.00033548445,0.00012951145,0.000008289011,0.0000069539356,0.0011715353],"genre_scores_gemma":[0.6477928,0.00003007015,0.351914,0.00009368514,0.000038755767,0.000037878293,0.000028924516,0.000014475881,0.000049436472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988421,0.00026205476,0.00029863566,0.00032714117,0.00005044232,0.00021959656],"domain_scores_gemma":[0.99929017,0.000039255683,0.0001333321,0.0004087278,0.000077587436,0.000050913648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078403635,0.0001329786,0.00021729156,0.000104908606,0.000027673605,0.00000473743,0.00021353093,0.00032953278,0.000045916924],"category_scores_gemma":[0.0004435425,0.00012778695,0.00009156964,0.00015831622,0.00008436211,0.000002272333,0.000082148865,0.00019334989,0.0000022648667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003151499,0.000053076776,0.00032659166,0.000019650459,0.000017886834,0.000001514272,0.00001744708,0.000010772042,0.9936354,0.0034614438,0.0000024987241,0.0024221868],"study_design_scores_gemma":[0.00029682502,0.00014365002,0.000075397904,0.0000067271926,0.000011213966,0.00003071114,0.000030973515,0.0002224293,0.9893501,0.0038370986,0.005863692,0.00013121548],"about_ca_topic_score_codex":0.00004559163,"about_ca_topic_score_gemma":0.000066436456,"teacher_disagreement_score":0.2734719,"about_ca_system_score_codex":0.000005182412,"about_ca_system_score_gemma":0.000063368025,"threshold_uncertainty_score":0.52110004},"labels":[],"label_agreement":null},{"id":"W2465657731","doi":"10.1007/978-1-4939-0844-8_7","title":"Common Garden Experiments to Characterize Cold Acclimation Responses in Plants from Different Climatic Regions","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant and animal studies","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Ecotype; Maladaptation; photoperiodism; Adaptation (eye); Frost (temperature); Biology; Local adaptation; Context (archaeology); Acclimatization; Ecology; Climate change; Growing season; Geography; Botany; Population; Meteorology; Demography","score_opus":0.11528357463050537,"score_gpt":0.36943392001608305,"score_spread":0.2541503453855777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2465657731","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9964825,0.00012413594,0.002021946,0.0007406844,0.00007328143,0.00021659488,0.000061556886,0.000022868757,0.00025645475],"genre_scores_gemma":[0.9813373,0.000068913476,0.017645413,0.0007005345,0.00004743127,0.00008219256,0.000089620924,0.0000013658795,0.00002722464],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977037,0.0013870287,0.00027749297,0.00029438306,0.000062663305,0.0002747308],"domain_scores_gemma":[0.99899554,0.0008240879,0.00007226663,0.000047218728,0.000008702611,0.000052153977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004966335,0.00014525061,0.0003485677,0.000036890815,0.000061735314,0.000018727445,0.00021681018,0.00011397293,0.000038691716],"category_scores_gemma":[0.0002342196,0.000063739324,0.000046894893,0.00011350879,0.000034862278,0.000018682884,0.0001561276,0.00010497852,0.000014232836],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099445744,0.00005636707,0.04737835,0.000001636166,0.000006371655,0.0000050757853,0.00012185092,3.8868598e-7,0.9447407,0.00025539342,0.000015853777,0.0073185787],"study_design_scores_gemma":[0.00024675863,0.0003109131,0.83873624,0.000060417304,0.0000047984963,0.0000015761799,0.0001882739,0.00009108053,0.15374902,0.0024789986,0.003922422,0.00020947843],"about_ca_topic_score_codex":0.00025861867,"about_ca_topic_score_gemma":0.0014370072,"teacher_disagreement_score":0.79135793,"about_ca_system_score_codex":0.000029444604,"about_ca_system_score_gemma":0.0000015052428,"threshold_uncertainty_score":0.25992143},"labels":[],"label_agreement":null},{"id":"W2466042700","doi":"10.1007/978-1-4939-1363-3_21","title":"Metabolomic and Lipidomic Analyses of Chronologically Aging Yeast","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Yeast; Metabolomics; Biology; Biochemistry; Trehalose; Computational biology; Intracellular; Extracellular; Chemistry; Bioinformatics","score_opus":0.026778699389268582,"score_gpt":0.38150591130316885,"score_spread":0.3547272119139003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466042700","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45007268,0.0018592235,0.54761845,0.000058055553,0.00009913467,0.0000785972,0.0000026399853,0.0000068163986,0.00020444312],"genre_scores_gemma":[0.58640164,0.00027772185,0.41293812,0.0002547805,0.00005986129,0.000008373503,0.000018019226,0.00001628434,0.000025173194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976731,0.0010749445,0.00037477634,0.0005161655,0.000053736338,0.00030729765],"domain_scores_gemma":[0.9992333,0.00005398645,0.00014626741,0.00044847417,0.00005300724,0.000064933665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011299244,0.00021041775,0.00043520276,0.00014053173,0.000032706645,0.00000989807,0.00027899476,0.0002833229,0.00001636212],"category_scores_gemma":[0.0005085922,0.0001912644,0.00010626126,0.00011480365,0.00033322483,0.0000019352879,0.0002594441,0.00014320234,0.0000019842244],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021971655,0.000032153846,0.0042163925,0.000015719195,0.000059899146,9.495378e-7,0.000047579448,0.00035311523,0.98283327,0.00078766677,0.000007905246,0.011623378],"study_design_scores_gemma":[0.0005935965,0.00030064964,0.005335491,0.0000076710885,0.00005157255,0.000014693913,0.00002742122,0.00079492084,0.98655283,0.0033443265,0.0027467865,0.00023005121],"about_ca_topic_score_codex":0.000056787292,"about_ca_topic_score_gemma":0.000019917397,"teacher_disagreement_score":0.136329,"about_ca_system_score_codex":0.000008505216,"about_ca_system_score_gemma":0.000032050153,"threshold_uncertainty_score":0.77995354},"labels":[],"label_agreement":null},{"id":"W2466240566","doi":"10.1007/978-1-60327-164-6_12","title":"Basic Phage Electron Microscopy","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":211,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Uranyl acetate; Magnification; Electron microscope; Staining; Negative stain; Uranyl; Chemistry; Materials science; Optics; Biology; Physics; Organic chemistry","score_opus":0.010049619814054219,"score_gpt":0.39089983796914707,"score_spread":0.38085021815509285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466240566","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41634345,0.00016114226,0.57263696,0.00056217884,0.00021085856,0.0001464322,0.0000026297255,0.000030160065,0.009906191],"genre_scores_gemma":[0.15644015,0.000030298952,0.8402832,0.0026626384,0.000021107766,0.000009277824,0.000009502627,0.000010487864,0.00053328706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988633,0.0003685468,0.00016195848,0.00028432888,0.000023316521,0.00029854826],"domain_scores_gemma":[0.9996843,0.00003260158,0.00004096751,0.00020121271,0.0000026286168,0.000038342612],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003269336,0.0001091717,0.00014323946,0.000043770677,0.000036737812,0.000011040781,0.00017501267,0.00010100939,0.0010578517],"category_scores_gemma":[0.00004429679,0.00010273294,0.000059550865,0.00018494745,0.000077783116,0.000040701074,0.000057743557,0.00018617793,0.00013756393],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009051728,0.000046305053,0.00020424665,4.5568547e-7,0.00000255884,0.000009455867,0.000030011252,0.000010488901,0.95482993,0.0002242102,0.00010818585,0.04452508],"study_design_scores_gemma":[0.00016422827,0.00015643725,0.008467481,0.0000029160435,0.0000049786204,0.000022078793,0.0000040433347,0.000031663792,0.95716196,0.0034484738,0.030416235,0.00011949921],"about_ca_topic_score_codex":0.00011130967,"about_ca_topic_score_gemma":0.00002507555,"teacher_disagreement_score":0.26764628,"about_ca_system_score_codex":0.00009083768,"about_ca_system_score_gemma":0.0000048680936,"threshold_uncertainty_score":0.99985534},"labels":[],"label_agreement":null},{"id":"W2466259172","doi":"10.1007/978-1-62703-429-6_2","title":"Methods for the Expression, Purification, Preparation, and Biophysical Characterization of Constructs of the c-Myc and Max b-HLH-LZs","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chronic Myeloid Leukemia Treatments","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Transcription factor; Carcinogenesis; Chemistry; Gene; DNA; Cell growth; Cell; Molecular biology; Stereochemistry; Biochemistry; Biology","score_opus":0.018929371311408524,"score_gpt":0.3951148188790282,"score_spread":0.3761854475676197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466259172","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46381482,0.00038128986,0.53416896,0.0005461372,0.000067329005,0.0009839277,0.0000072609423,0.000004600964,0.00002569958],"genre_scores_gemma":[0.20947734,0.00010291279,0.7899489,0.00013714047,0.000018650586,0.00023283764,0.000023173932,0.000011139041,0.000047921498],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840546,0.0008531244,0.00034535446,0.0002321805,0.000047921418,0.00011593862],"domain_scores_gemma":[0.99859154,0.0006236866,0.00022411703,0.0003820398,0.00014861404,0.000029976525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066249876,0.00010766551,0.0002958974,0.000052748714,0.000041078132,0.000004914104,0.00009342588,0.00012517183,0.000017132032],"category_scores_gemma":[0.0008569642,0.000060028466,0.000046862944,0.00015843735,0.0004146024,0.00002709852,0.00007285409,0.00008129696,2.2405183e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040004197,0.000032373166,0.0037854987,0.000054646476,0.00004348917,9.16634e-8,0.00022382919,8.1486684e-7,0.95175415,0.0022483643,0.0000060679367,0.04181064],"study_design_scores_gemma":[0.0009668775,0.00012710015,0.040348396,0.000038420752,0.0000802201,0.000015908085,0.00004056533,0.0015017854,0.95176065,0.004414482,0.00065228366,0.00005328577],"about_ca_topic_score_codex":0.000032422584,"about_ca_topic_score_gemma":6.0209186e-7,"teacher_disagreement_score":0.25577995,"about_ca_system_score_codex":0.000030211042,"about_ca_system_score_gemma":0.00008479012,"threshold_uncertainty_score":0.24478899},"labels":[],"label_agreement":null},{"id":"W2466290589","doi":"10.1007/978-1-4939-3603-8_21","title":"Investigation of Host and Pathogen Contributions to Infectious Colitis Using the Citrobacter rodentium Mouse Model of Infection","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Children's Hospital","funders":"","keywords":"Citrobacter rodentium; Pathogen; Microbiology; Host (biology); Colitis; Biology; Citrobacter; Immunology; Ecology; Enterobacteriaceae; Genetics; Escherichia coli","score_opus":0.02944009082891247,"score_gpt":0.383335990077183,"score_spread":0.35389589924827053,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466290589","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5315686,0.00009283739,0.4679522,0.00010835069,0.000023556662,0.00017624168,0.00005944762,0.0000024958583,0.000016271519],"genre_scores_gemma":[0.898133,0.0002175838,0.101397574,0.00011848527,0.000022746472,0.00006083868,0.000009148923,0.0000120792465,0.000028593344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983266,0.0009130996,0.00025790406,0.00024130662,0.00005801197,0.00020305956],"domain_scores_gemma":[0.9992493,0.00008648002,0.00010813034,0.000252201,0.0002566128,0.000047287056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009495849,0.00010882014,0.0002018875,0.00010336858,0.00004597429,0.0000045229176,0.00008794204,0.00014709686,0.0000013222847],"category_scores_gemma":[0.0014032383,0.00007415887,0.000056579283,0.00017293802,0.00032775462,0.000003844044,0.0002522632,0.00006893137,1.4541241e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035031164,0.000011875557,0.03742006,0.000012587986,0.00004785035,1.9819028e-7,0.000043600718,0.00015988636,0.9608401,0.0008847559,0.0000042212564,0.00053985376],"study_design_scores_gemma":[0.0003864271,0.00021524259,0.008477849,0.000015801956,0.000017522698,0.000003172655,0.000008299159,0.0005684199,0.9880466,0.0020493185,0.00011986573,0.000091469694],"about_ca_topic_score_codex":0.00015648047,"about_ca_topic_score_gemma":0.000114530936,"teacher_disagreement_score":0.36656436,"about_ca_system_score_codex":0.00003313729,"about_ca_system_score_gemma":0.00008121803,"threshold_uncertainty_score":0.30241108},"labels":[],"label_agreement":null},{"id":"W2466333091","doi":"10.1007/978-1-61779-231-1_12","title":"Identification of Seed Dormancy Mutants by Activation Tagging","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Biology; Gene; Enhancer; Transduction (biophysics); Mutant; Genetics; Seed dormancy; DNA; Promoter; Dormancy; Computational biology; Gene expression; Germination; Botany","score_opus":0.03849297774339946,"score_gpt":0.35096788165571813,"score_spread":0.3124749039123187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466333091","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94994074,0.00010057988,0.04857106,0.00012344426,0.00011245756,0.00012865137,0.000009868179,0.00002061578,0.00099256],"genre_scores_gemma":[0.98125416,0.000012415196,0.018442156,0.00018558497,0.000012974359,0.000014946855,0.00004373155,7.6965586e-7,0.000033238357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988189,0.0005524492,0.00027122468,0.00019310626,0.000035362926,0.00012898908],"domain_scores_gemma":[0.999592,0.00012829392,0.00016050998,0.00005501312,0.00004306387,0.000021128115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054630113,0.0000735726,0.00014101296,0.000030001785,0.000025452673,0.0000027117085,0.00015290565,0.0001258873,0.000106303945],"category_scores_gemma":[0.00015206811,0.00003463726,0.0000389898,0.00030166487,0.00006332358,0.00003386138,0.000032532353,0.00007157039,0.0000044399817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014234914,0.000044850232,0.001562183,0.0000026715911,0.000004367266,3.0109015e-7,0.00009323496,6.177749e-7,0.9522062,0.0009134651,0.000008299467,0.0451496],"study_design_scores_gemma":[0.000077707366,0.00008145525,0.053405665,0.000004392951,0.0000021302797,8.2738404e-7,0.000075080316,0.00013382034,0.93922466,0.006280012,0.00064197386,0.00007227276],"about_ca_topic_score_codex":0.00009837997,"about_ca_topic_score_gemma":0.0000023619139,"teacher_disagreement_score":0.051843483,"about_ca_system_score_codex":0.000009643524,"about_ca_system_score_gemma":0.000004634415,"threshold_uncertainty_score":0.14124665},"labels":[],"label_agreement":null},{"id":"W2466423812","doi":"10.1007/978-1-60327-834-8_23","title":"Reconstructing Regulatory Kinase Pathways from Phosphopeptide Data: A Bioinformatics Approach","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Phosphopeptide; In silico; Computational biology; Phosphorylation; Protein kinase A; Computer science; Protein–protein interaction; Kinase; Bioinformatics; Cell biology; Biology; Chemistry; Biochemistry; Gene","score_opus":0.06621834605074624,"score_gpt":0.3751918362584062,"score_spread":0.30897349020765996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2466423812","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000011239853,0.58261925,0.41469607,0.0000034334669,0.0003295686,0.00058132625,0.00033591824,0.000020306574,0.0014028751],"genre_scores_gemma":[7.077857e-7,0.47817135,0.51515174,0.00018077997,0.00020412482,0.000046423276,0.0061679375,0.000054850163,0.000022070739],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9947073,0.0012776979,0.0018619786,0.0012190545,0.0001317293,0.0008022319],"domain_scores_gemma":[0.9954831,0.00015156988,0.0010119803,0.003113861,0.000057540256,0.00018192653],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002552429,0.0008892379,0.0021336526,0.00026691213,0.00009572919,0.00007329613,0.0019527271,0.0019225398,0.000016424478],"category_scores_gemma":[0.00040679355,0.00079550163,0.0005086976,0.00038406288,0.00028105895,0.000011801198,0.0014193419,0.0009573757,0.00001579594],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011251283,0.000046761066,0.000004020436,0.0008312031,0.00024099022,0.000011282008,0.000037274793,0.000011839316,0.000977755,0.0004426534,0.00036659095,0.9970184],"study_design_scores_gemma":[0.0005005939,0.00014534702,6.4403616e-7,0.0011301365,0.0003660759,0.00012812662,0.000075152195,0.002470109,0.00044803374,0.005284568,0.98827857,0.0011726593],"about_ca_topic_score_codex":0.000033226635,"about_ca_topic_score_gemma":0.0000066285734,"teacher_disagreement_score":0.99584574,"about_ca_system_score_codex":0.00008313713,"about_ca_system_score_gemma":0.0004715295,"threshold_uncertainty_score":0.9994496},"labels":[],"label_agreement":null},{"id":"W2467218038","doi":"10.1007/978-1-4939-2760-9_24","title":"Evaluation of Quenching and Extraction Methods for Nucleotide/Nucleotide Sugar Analysis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Nucleotide; Nucleotide sugar; Glycosylation; Intracellular; Biochemistry; Glycosyltransferase; Chemistry; Biology; Enzyme; Gene","score_opus":0.08560574159786247,"score_gpt":0.5141067498865067,"score_spread":0.42850100828864424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467218038","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2404722,0.0015499211,0.7569257,0.0000798168,0.0000777933,0.00043176426,0.0000065433255,0.000005505245,0.00045076502],"genre_scores_gemma":[0.20660439,0.0000449457,0.79300326,0.00005681703,0.000028710221,0.00013573353,0.00007655109,0.000016247834,0.000033333778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99466884,0.0040454743,0.00039184504,0.00046687448,0.00017779607,0.00024916723],"domain_scores_gemma":[0.9986074,0.00015029366,0.00016249134,0.0003647282,0.000616492,0.00009861212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.014895409,0.00014776578,0.00032475276,0.00039058263,0.000037607115,0.000014257934,0.00015180642,0.00024381037,0.000022767541],"category_scores_gemma":[0.005310372,0.00014409349,0.0001421313,0.00045100172,0.00012275233,0.0000062317704,0.000102848404,0.00012124732,5.8828357e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007685663,0.00003682242,0.0019420835,0.000011277232,0.00021332936,4.56128e-7,0.000053523232,0.0013074711,0.8553934,0.00061473995,0.000011039328,0.14033899],"study_design_scores_gemma":[0.0014808051,0.0004283405,0.001958399,0.000006838562,0.00042665764,0.000006061702,0.00016415802,0.04949663,0.9267346,0.01299175,0.0060836035,0.00022215777],"about_ca_topic_score_codex":0.00015307176,"about_ca_topic_score_gemma":0.00008842459,"teacher_disagreement_score":0.14011684,"about_ca_system_score_codex":0.000046849975,"about_ca_system_score_gemma":0.00015583035,"threshold_uncertainty_score":0.6357395},"labels":[],"label_agreement":null},{"id":"W2467387144","doi":"10.1007/978-1-61779-148-2_2","title":"Metabolic Labeling of Model Organisms Using Heavy Nitrogen (15N)","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Stable isotope labeling by amino acids in cell culture; Caenorhabditis elegans; Isotopic labeling; Quantitative proteomics; Biochemistry; Biology; Isotopes of nitrogen; Proteomics; Amino acid; Stable isotope ratio; Computational biology; Chemistry; Derivatization; Metabolic pathway; Catabolism; Isotope; Metabolism; Mass spectrometry; Gene; Chromatography; Nitrogen","score_opus":0.0678086298798131,"score_gpt":0.40961644864437174,"score_spread":0.3418078187645586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467387144","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12248235,0.00046946644,0.8756982,0.0000070531814,0.000009555728,0.00008431127,0.000011511483,0.000041196614,0.0011963657],"genre_scores_gemma":[0.031941745,0.00006109952,0.9678431,0.00006108462,0.000008722892,0.000038055496,0.0000067947644,0.00002822578,0.000011155619],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908876,0.00009150509,0.00031199635,0.00026216567,0.00003343942,0.00021212369],"domain_scores_gemma":[0.99935895,0.000032950033,0.0001325036,0.0003911162,0.000049595616,0.00003485485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003368616,0.00012627576,0.00027418445,0.00007121041,0.000029242134,0.0000019645056,0.00025341776,0.00019491027,0.00007218537],"category_scores_gemma":[0.00008235864,0.00012756255,0.00007086081,0.0001692655,0.00009340331,0.000017746459,0.00013099275,0.00018087139,8.269317e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009036878,0.000038932336,0.00058633235,0.000010251139,0.000019138017,0.0000012335427,0.00006632935,0.000233807,0.960727,0.035481837,1.4140821e-7,0.0028259717],"study_design_scores_gemma":[0.000090563764,0.0000066869775,7.0382305e-7,0.000006438286,0.000020096413,0.0000043466266,0.000015096128,0.008894041,0.73797464,0.25284562,0.00004935325,0.0000924054],"about_ca_topic_score_codex":0.00008929079,"about_ca_topic_score_gemma":0.0000016130806,"teacher_disagreement_score":0.22275235,"about_ca_system_score_codex":0.000023189616,"about_ca_system_score_gemma":0.00003640432,"threshold_uncertainty_score":0.520185},"labels":[],"label_agreement":null},{"id":"W2467515604","doi":"10.1007/978-1-62703-284-1_29","title":"Histone Deacetylase Inhibitor Valproic Acid as a Small Molecule Inducer to Direct the Differentiation of Pluripotent Stem Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Induced pluripotent stem cell; Retinoic acid; Histone deacetylase 5; Histone deacetylase; Histone deacetylase 2; Valproic Acid; Chemistry; P19 cell; Cell biology; Histone deacetylase inhibitor; HDAC11; Retinoic acid receptor; Histone; Biology; Molecular biology; Biochemistry; Embryonic stem cell; Neuroscience","score_opus":0.022476970709965346,"score_gpt":0.3435159605036138,"score_spread":0.3210389897936485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467515604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7963008,0.0012926399,0.19986051,0.00050354115,0.00025598367,0.0011695506,0.00001224982,0.000014326927,0.0005903641],"genre_scores_gemma":[0.8748043,0.00014530454,0.12207949,0.0008264618,0.00010323094,0.00064431137,0.00006052892,0.00008344301,0.0012528987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955859,0.0021769756,0.00061151217,0.00079100364,0.00020975093,0.0006248219],"domain_scores_gemma":[0.99838024,0.000095574724,0.0002015406,0.00092476123,0.00021770158,0.00018019539],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012903076,0.00033504734,0.00044397608,0.00024421696,0.00007193505,0.000027668751,0.0006850168,0.00039128194,0.000058662295],"category_scores_gemma":[0.0003114746,0.0002595717,0.000215419,0.0003984827,0.00019419324,0.000004739711,0.0006438994,0.00030627043,0.0000635185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000771721,0.00014421737,0.00022169018,0.0000342722,0.00008237897,0.0000071950763,0.00009801531,0.0000982081,0.9887105,0.00008005804,0.00014316294,0.010303133],"study_design_scores_gemma":[0.00056368095,0.00057253847,0.0004178918,0.0000223574,0.000024327623,0.000010164464,0.00006492452,0.00016329365,0.99583036,0.00025119807,0.0018001801,0.0002791147],"about_ca_topic_score_codex":0.00029655278,"about_ca_topic_score_gemma":0.000045499575,"teacher_disagreement_score":0.0785035,"about_ca_system_score_codex":0.0000834227,"about_ca_system_score_gemma":0.000119591365,"threshold_uncertainty_score":0.99998564},"labels":[],"label_agreement":null},{"id":"W2467634802","doi":"10.1007/978-1-62703-386-2_11","title":"Proteomic Analysis of Brain Mitochondrial Proteome and Mitochondrial Complexes","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Proteome; Mass spectrometry; Proteomics; Mitochondrion; Computational biology; Ultracentrifuge; Chemistry; Biology; Biochemistry; Chromatography; Gene","score_opus":0.016196779023348068,"score_gpt":0.3417223486301571,"score_spread":0.325525569606809,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467634802","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41461664,0.00020763265,0.5830729,0.00031950968,0.0004886391,0.000987322,0.000025005544,0.000012022718,0.0002703538],"genre_scores_gemma":[0.014496338,0.00003881011,0.98328936,0.00071831385,0.00026841715,0.0005141609,0.00025984077,0.00003719579,0.00037754467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964206,0.0017057504,0.0006216636,0.0007640961,0.000088273366,0.0003995935],"domain_scores_gemma":[0.9988503,0.00011120618,0.00022605067,0.00057887763,0.00012258618,0.0001110106],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045124488,0.00028282465,0.00069287035,0.000522944,0.000046399076,0.000019724492,0.00028140916,0.0005132363,0.000235445],"category_scores_gemma":[0.0010114334,0.00026262263,0.00025012015,0.00060240657,0.0003745946,0.000005693023,0.00022262694,0.00021010263,0.0000071127843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017228814,0.00005948249,0.0033109705,0.000015909987,0.00032981564,0.000002882213,0.000053183423,0.00006556642,0.99278915,0.0008521554,0.000294853,0.002053765],"study_design_scores_gemma":[0.0015998736,0.0007649616,0.0035590008,0.000008842316,0.00018570019,0.000020459207,0.000033922508,0.00041912036,0.98498595,0.002923257,0.005117146,0.00038177258],"about_ca_topic_score_codex":0.00023194932,"about_ca_topic_score_gemma":0.000055707576,"teacher_disagreement_score":0.4002165,"about_ca_system_score_codex":0.000013787213,"about_ca_system_score_gemma":0.000059726466,"threshold_uncertainty_score":0.9999826},"labels":[],"label_agreement":null},{"id":"W2467642650","doi":"10.1007/978-1-4939-3581-9_15","title":"Using Förster-Resonance Energy Transfer to Measure Protein Interactions Between Bcl-2 Family Proteins on Mitochondrial Membranes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Toronto; Sunnybrook Health Science Centre","funders":"Canadian Institutes of Health Research","keywords":"Bcl-2 family; Mitochondrial carrier; Cytochrome c; Translocase of the inner membrane; Förster resonance energy transfer; Mitochondrion; Cell biology; In vitro; Inner mitochondrial membrane; Membrane; Bacterial outer membrane; Mitochondrial membrane transport protein; Membrane protein; Cytosol; Biophysics; Translocase of the outer membrane; Biology; Apoptosis; Chemistry; Biochemistry; Fluorescence; Gene; Programmed cell death; Physics","score_opus":0.055544006442969814,"score_gpt":0.36541783849443255,"score_spread":0.30987383205146274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467642650","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11481951,0.00032108556,0.88198507,0.00055000186,0.000944086,0.0007207021,0.000058343965,0.000027936303,0.00057327136],"genre_scores_gemma":[0.15433754,0.000056446108,0.8384235,0.0026008144,0.0016374182,0.0009210687,0.00008542959,0.00014569332,0.0017920847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956594,0.0021517198,0.00052655296,0.0009848089,0.0001321916,0.00054532854],"domain_scores_gemma":[0.99888784,0.00009918752,0.000057629353,0.0006707509,0.00011681821,0.00016778025],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005192856,0.00037848938,0.00047034776,0.00028532645,0.000089387904,0.000016905322,0.00036862376,0.0005149283,0.000056251356],"category_scores_gemma":[0.0005994506,0.00029209367,0.00021362842,0.00028819358,0.00014360876,0.0000070169854,0.00011599072,0.00020884894,0.000018989913],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005453839,0.00006603201,0.0002321482,0.000009008006,0.000045399403,0.000011921094,0.000028243696,0.000022256536,0.96443707,0.0013111199,0.00005412904,0.03323729],"study_design_scores_gemma":[0.0011459623,0.0007178659,0.00008892266,0.00008077625,0.000018386861,0.00001660536,0.000009397544,0.0000064354863,0.8564039,0.0006328929,0.14052437,0.00035452988],"about_ca_topic_score_codex":0.000092943854,"about_ca_topic_score_gemma":0.00011285823,"teacher_disagreement_score":0.14047024,"about_ca_system_score_codex":0.000059015325,"about_ca_system_score_gemma":0.00010927645,"threshold_uncertainty_score":0.9999531},"labels":[],"label_agreement":null},{"id":"W2467860689","doi":"10.1007/978-1-62703-761-7_14","title":"A Bacterial One-Hybrid System to Isolate Homing Endonuclease Variants with Altered DNA Target Specificities","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of General Medical Sciences","keywords":"Homing endonuclease; Endonuclease; Biology; Plasmid; DNA; Restriction enzyme; Genetics; Gene; Homing (biology); Locus (genetics); Genomic library; Computational biology; genomic DNA; Base sequence","score_opus":0.011133567094511281,"score_gpt":0.33546154313673426,"score_spread":0.32432797604222297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467860689","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30159226,0.000134854,0.69683504,0.000042658306,0.00039990759,0.00022367746,0.000018726076,0.00002452542,0.00072833087],"genre_scores_gemma":[0.46024498,0.000008343467,0.53909457,0.00016535827,0.00030061998,0.000043763055,0.000050238108,0.00004540892,0.000046696856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977326,0.0006879742,0.0003538254,0.0006440312,0.00007562517,0.00050595857],"domain_scores_gemma":[0.999104,0.000047267255,0.00007708248,0.0005696963,0.000051779487,0.00015014355],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00081795215,0.00028909702,0.0004096757,0.00015053869,0.000051255258,0.000032817425,0.00029967676,0.00016825042,0.000031013766],"category_scores_gemma":[0.00020322113,0.00027785843,0.00008455173,0.00013083722,0.00006706104,0.000002794442,0.00018585057,0.00013913758,0.000008775497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000245184,0.000028249411,0.00020361762,0.000043723594,0.00006305373,0.000015767117,0.00005438473,0.0010950222,0.9941953,0.00071628107,0.000028694367,0.0033107623],"study_design_scores_gemma":[0.0009893944,0.00072798115,0.00050037814,0.000058500766,0.000025945483,0.000078096375,0.00007545223,0.0014736303,0.97996706,0.00013538338,0.015525403,0.00044278742],"about_ca_topic_score_codex":0.00003202126,"about_ca_topic_score_gemma":0.000012922553,"teacher_disagreement_score":0.15865271,"about_ca_system_score_codex":0.000029427238,"about_ca_system_score_gemma":0.00003664931,"threshold_uncertainty_score":0.99996734},"labels":[],"label_agreement":null},{"id":"W2467902027","doi":"10.1007/978-1-62703-134-9_2","title":"Teaching Microfluidic Diagnostics Using Jell-O® Chips","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Microfluidics; Nanotechnology; Mold; Materials science; Chip; Computer science; Engineering; Electrical engineering; Composite material","score_opus":0.0201741335338523,"score_gpt":0.34183402570928667,"score_spread":0.3216598921754344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2467902027","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15018535,0.15212359,0.6966114,0.000021170303,0.00018909531,0.00011321375,0.0000033233023,0.000069517344,0.0006833318],"genre_scores_gemma":[0.12409905,0.057797775,0.81707364,0.00046957663,0.00028529,0.00008265992,0.000039997216,0.00011913581,0.000032855813],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998467,0.00051728165,0.00027207116,0.00017864551,0.00004010514,0.0005248872],"domain_scores_gemma":[0.9993983,0.00017872232,0.000027724276,0.00029886037,0.000011503925,0.0000848969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008894925,0.00017942005,0.00023356697,0.00014801256,0.0000625779,0.000007905237,0.00018785358,0.0001936445,0.000036114176],"category_scores_gemma":[0.0001274717,0.00018564677,0.000064963424,0.00019642078,0.000056970115,0.000030290426,0.000057431174,0.00036417542,0.000016011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000001209569,0.000025627147,0.0019249315,0.00001365631,0.00002297643,0.0000020853902,0.00011675,0.00001372135,0.9834593,0.0074004666,0.0009685516,0.0060507157],"study_design_scores_gemma":[0.00013445856,0.000016107433,0.0002239252,0.000010161371,0.000027724416,0.000029305087,0.000033292654,0.00044828112,0.901112,0.002226599,0.09548035,0.00025777155],"about_ca_topic_score_codex":0.000037652397,"about_ca_topic_score_gemma":2.7771242e-7,"teacher_disagreement_score":0.12046224,"about_ca_system_score_codex":0.000088107285,"about_ca_system_score_gemma":0.0000134223255,"threshold_uncertainty_score":0.75704557},"labels":[],"label_agreement":null},{"id":"W2468068212","doi":"10.1007/978-1-4939-1047-2_2","title":"Scalable Cardiac Differentiation of Human Pluripotent Stem Cells as Microwell-Generated, Size Controlled Three-Dimensional Aggregates","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Multicellular organism; Induced pluripotent stem cell; Human Induced Pluripotent Stem Cells; Stem cell; Cell biology; Cellular differentiation; Biology; Directed differentiation; Nanotechnology; Cell; Chemistry; Computational biology; Materials science; Embryonic stem cell; Biochemistry","score_opus":0.014226694219155256,"score_gpt":0.32067597335271597,"score_spread":0.30644927913356074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468068212","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.672245,0.0012103611,0.32525542,0.000044871776,0.00045867203,0.00033827635,0.000004936374,0.000060149734,0.0003822712],"genre_scores_gemma":[0.72494125,0.000051319275,0.2745867,0.00005624182,0.00006599043,0.000075909746,0.000019721605,0.000051936855,0.00015090505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99706775,0.0014594557,0.00052794436,0.00032556054,0.00019264163,0.00042665776],"domain_scores_gemma":[0.99830663,0.0010577502,0.0000896139,0.00034968872,0.00009855456,0.00009775708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024572576,0.00020636365,0.00065819995,0.00018525173,0.000040570405,0.000014603363,0.00027376914,0.00029636058,0.00010158701],"category_scores_gemma":[0.0005033561,0.000179976,0.00016316479,0.00025254642,0.00017146961,0.000014800053,0.00014381683,0.00031398263,0.000018918194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003308936,0.00003349286,0.00094518636,0.000052671465,0.00011767585,0.0000035368953,0.000014682052,0.0022275592,0.9843517,0.0007542278,0.000022154903,0.01144403],"study_design_scores_gemma":[0.0014372059,0.00011380828,0.0006017014,0.000040093702,0.000023998744,0.0000012748596,0.0000032803641,0.035548285,0.9580508,0.003617589,0.00039253186,0.0001694456],"about_ca_topic_score_codex":0.00009128442,"about_ca_topic_score_gemma":0.0000066614916,"teacher_disagreement_score":0.052696224,"about_ca_system_score_codex":0.000052908512,"about_ca_system_score_gemma":0.000024608458,"threshold_uncertainty_score":0.7339208},"labels":[],"label_agreement":null},{"id":"W2468256610","doi":"10.1007/978-1-4939-2309-0_29","title":"Proteomic Analyses of a Bi-Lobed Structure in Trypanosoma brucei","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Flagellum; Basal body; Trypanosoma brucei; Biology; Golgi apparatus; Cell biology; Organelle; Microtubule organizing center; Microtubule; Axoneme; Biogenesis; Centrosome; Cell; Genetics; Cell cycle","score_opus":0.052996868138391634,"score_gpt":0.4920266958372876,"score_spread":0.439029827698896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468256610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70802236,0.00026470362,0.28951973,0.00059684523,0.00003705773,0.0004849216,0.000013131097,0.000014565597,0.0010466917],"genre_scores_gemma":[0.51255655,0.000021292482,0.4871149,0.00016954394,0.000023242614,0.000043158594,0.000022803,0.00001211216,0.00003637616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976402,0.0011573515,0.0004237445,0.00033672605,0.00010185121,0.00034011077],"domain_scores_gemma":[0.9990366,0.00017557091,0.00009374165,0.0005281076,0.00007585968,0.00009012853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012030293,0.00013903891,0.00051266246,0.00054599694,0.000016298258,0.000004730855,0.00020022436,0.00021957722,0.000117240466],"category_scores_gemma":[0.002121822,0.00011214727,0.00009990819,0.0007685686,0.00021149704,0.00001749968,0.00008485998,0.00033010074,0.000003232117],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008549335,0.00007145905,0.008915018,0.000041979318,0.0000322246,0.0000080000045,0.000036146615,0.0000126102905,0.9694001,0.002875236,0.00001296081,0.018508751],"study_design_scores_gemma":[0.001065021,0.0003212623,0.27847534,0.00002785847,0.000014791309,0.00002595119,0.00001532823,0.00039802757,0.7088869,0.009668289,0.001015712,0.000085517684],"about_ca_topic_score_codex":0.00021288221,"about_ca_topic_score_gemma":0.000037725284,"teacher_disagreement_score":0.26956034,"about_ca_system_score_codex":0.000055121574,"about_ca_system_score_gemma":0.00010412278,"threshold_uncertainty_score":0.45732328},"labels":[],"label_agreement":null},{"id":"W2468379350","doi":"10.1007/978-1-4939-2874-3_9","title":"Temporary Conversion of Protein Amino Groups to Azides: A Synthetic Strategy for Glycoconjugate Vaccines","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"","keywords":"Azide; Glycoconjugate; Chemistry; Alkyne; Ligand (biochemistry); Propargyl; Combinatorial chemistry; Conjugate; Amine gas treating; Cycloaddition; Bioconjugation; Click chemistry; Amino acid; Amide; Biochemistry; Organic chemistry; Catalysis","score_opus":0.05253794259375766,"score_gpt":0.4093911570805726,"score_spread":0.35685321448681495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468379350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5250576,0.00048207332,0.47242716,0.00020488533,0.0000812132,0.0013282419,0.000022802547,0.000010580326,0.00038542246],"genre_scores_gemma":[0.7077036,0.000013210532,0.291195,0.0001874075,0.00005104362,0.00038573451,0.0001020612,0.00003335033,0.0003285855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976531,0.00086579385,0.00043806314,0.00054545666,0.00011403431,0.00038350065],"domain_scores_gemma":[0.99888027,0.000058388494,0.0001211893,0.00048727504,0.0002693018,0.00018358786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001729708,0.00021052378,0.00034953104,0.00024042357,0.000043786593,0.0000102358235,0.00034736068,0.0003021704,0.000021535796],"category_scores_gemma":[0.0013352431,0.0001936992,0.00011975013,0.00027486717,0.00010281767,0.0000046234554,0.00029175583,0.0001179423,0.000005722809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064827723,0.000080894206,0.0014698578,0.00007631934,0.000032439635,0.0000062412055,0.000048152127,0.0001485012,0.99119973,0.001079275,0.00008590317,0.0051243952],"study_design_scores_gemma":[0.001453094,0.0019357754,0.00012536543,0.000028844808,0.000008044357,0.00000966197,0.00012323295,0.00036506893,0.9758637,0.0034433526,0.016417341,0.00022650069],"about_ca_topic_score_codex":0.00009396667,"about_ca_topic_score_gemma":0.000018058334,"teacher_disagreement_score":0.18264599,"about_ca_system_score_codex":0.00002728697,"about_ca_system_score_gemma":0.00018686248,"threshold_uncertainty_score":0.7898824},"labels":[],"label_agreement":null},{"id":"W2468475547","doi":"10.1007/978-1-4939-3664-9_7","title":"Identification of Connexin43 Phosphorylation and S-Nitrosylation in Cultured Primary Vascular Cells","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connexins and lens biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research; Alberta Innovates - Health Solutions; Hemophilia Center of Western Pennsylvania","keywords":"Blot; Phosphorylation; S-Nitrosylation; Chemistry; Nitrosylation; Immunoprecipitation; Cell biology; Biochemistry; Biology; Cysteine; Enzyme; Gene; Nitric oxide","score_opus":0.009411105972830312,"score_gpt":0.32024968152230754,"score_spread":0.31083857554947725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468475547","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46978214,0.0014465353,0.5282799,0.000091003116,0.00009705423,0.00020006367,0.000010744329,0.0000047383614,0.00008782779],"genre_scores_gemma":[0.8392017,0.00089449924,0.1594482,0.0001719965,0.000039353505,0.000050215345,0.000083997475,0.000021806249,0.00008826381],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780124,0.0009793123,0.0004929285,0.0004647454,0.00004748953,0.00021425271],"domain_scores_gemma":[0.99930507,0.00008672802,0.00018101647,0.00032276503,0.00007119015,0.00003321076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015202614,0.0001529761,0.00027203409,0.00015815778,0.000018200957,0.0000046363657,0.00013135416,0.00034844884,0.000011658048],"category_scores_gemma":[0.00034689912,0.00011979626,0.00007027123,0.00015556243,0.00019314526,0.0000050319536,0.000099191784,0.0000738525,0.0000014306833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007530717,0.000039227747,0.009045178,0.000014891427,0.000020008229,0.0000013676636,0.000038958744,0.00001039381,0.9596791,0.0013021389,0.0000050878702,0.02976829],"study_design_scores_gemma":[0.0009863735,0.00016005491,0.011893167,0.000015950694,0.000010698304,0.0000035882363,0.000023867347,0.000096813084,0.98110646,0.003061143,0.0024722568,0.00016960669],"about_ca_topic_score_codex":0.00002869726,"about_ca_topic_score_gemma":0.000034206158,"teacher_disagreement_score":0.36941952,"about_ca_system_score_codex":0.000026301097,"about_ca_system_score_gemma":0.000034338722,"threshold_uncertainty_score":0.488515},"labels":[],"label_agreement":null},{"id":"W2468749529","doi":"10.1007/978-1-4939-3393-8_14","title":"Design, Construction, and Validation of Artificial MicroRNA Vectors Using Agrobacterium-Mediated Transient Expression System","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; microRNA; Agrobacterium; Gene silencing; Nicotiana benthamiana; Computational biology; Gene; Transformation (genetics); Genetics","score_opus":0.06712131709340502,"score_gpt":0.3479416064652409,"score_spread":0.2808202893718359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468749529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6780237,0.000098520846,0.32155132,0.0000627231,0.000067170266,0.00013570883,0.000044887798,0.000011849798,0.000004117002],"genre_scores_gemma":[0.6126821,0.00007872362,0.38715124,0.000012988724,0.00003435541,0.000016785025,0.00002067775,0.0000013884446,0.0000017386263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977481,0.0015149334,0.00025354803,0.0002298325,0.000063767526,0.00018982218],"domain_scores_gemma":[0.9991751,0.00059820904,0.00009552137,0.000038010494,0.000055884888,0.000037310565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008422442,0.00009394174,0.00021391989,0.000038491868,0.000054597804,0.000006705015,0.00008471064,0.000110272034,0.000012940625],"category_scores_gemma":[0.00027397386,0.000032816115,0.000030647603,0.00018736969,0.00020049393,0.000029100413,0.000050803646,0.000049039896,7.8500756e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053836397,0.000011880494,0.0008656393,0.000008887752,0.000009534848,0.0000030465508,0.000032164124,0.0000037012717,0.9775486,0.00004950405,0.0000014209363,0.02141181],"study_design_scores_gemma":[0.00010143783,0.0000977649,0.0015037743,0.00005919236,0.000005473816,0.00001168928,0.000084885025,0.000057548303,0.9976769,0.00021704713,0.00010799016,0.00007630028],"about_ca_topic_score_codex":0.00005956066,"about_ca_topic_score_gemma":0.000006524058,"teacher_disagreement_score":0.06559993,"about_ca_system_score_codex":0.000031516487,"about_ca_system_score_gemma":0.000007920164,"threshold_uncertainty_score":0.13382024},"labels":[],"label_agreement":null},{"id":"W2468775170","doi":"10.1007/978-1-4939-2957-3_21","title":"Measurement of Cdk1/Cyclin B Kinase Activity by Specific Antibodies and Western Blotting","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Lethbridge","funders":"","keywords":"Cyclin-dependent kinase 1; Mitosis; Cyclin B; Recombinant DNA; Molecular biology; Cyclin B1; Biology; Blot; Western blot; Cyclin; Cell biology; Biochemistry; Cell cycle; Cell; Gene","score_opus":0.03994589586358262,"score_gpt":0.3663480346769047,"score_spread":0.3264021388133221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468775170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60600823,0.005942633,0.38760453,0.0000654864,0.00010088549,0.00013142276,0.000010768146,0.0000050277426,0.00013103482],"genre_scores_gemma":[0.78542435,0.00072352064,0.21355157,0.00013465183,0.00004966544,0.000017680268,0.000031348052,0.000027827447,0.000039412836],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981199,0.0007877982,0.00028476084,0.0004462654,0.00009168576,0.00026958494],"domain_scores_gemma":[0.9993068,0.000020941614,0.00013553501,0.00034351926,0.00011010082,0.00008312197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016622158,0.00019085602,0.00032099106,0.00007555803,0.000022609402,0.000009160431,0.0001676202,0.00024544864,0.0000014821633],"category_scores_gemma":[0.00029510615,0.00018499311,0.00006582939,0.00008649855,0.00018442105,0.0000027852413,0.0002205525,0.00012813573,7.481246e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006536192,0.00008999644,0.015367132,0.00002089838,0.000038363727,0.00000377588,0.00004230152,0.000008249731,0.96618605,0.000058738373,0.000079433674,0.018039728],"study_design_scores_gemma":[0.00068770547,0.0002562575,0.0008328165,0.000020715619,0.000014132271,0.000010738885,0.000050159513,0.00004207328,0.98526454,0.00026444404,0.01235806,0.00019836234],"about_ca_topic_score_codex":0.00007785789,"about_ca_topic_score_gemma":0.000041945215,"teacher_disagreement_score":0.1794161,"about_ca_system_score_codex":0.000023833401,"about_ca_system_score_gemma":0.000048592774,"threshold_uncertainty_score":0.75438005},"labels":[],"label_agreement":null},{"id":"W2468848913","doi":"10.1007/978-1-4939-2877-4_12","title":"The Cruciform DNA Mobility Shift Assay: A Tool to Study Proteins That Recognize Bent DNA","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Electrophoretic mobility shift assay; Cruciform; DNA; DNA-binding protein; HMG-box; Bent molecular geometry; Biophysics; DNA binding site; Molecular biology; Chemistry; Biology; Computational biology; Genetics; Gene; Transcription factor; Engineering; Promoter; Structural engineering; Gene expression","score_opus":0.0311763087109173,"score_gpt":0.3601010280913592,"score_spread":0.3289247193804419,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2468848913","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70535773,0.00032812444,0.29179195,0.00035064248,0.00030060095,0.0013541579,0.000016876598,0.000014878663,0.00048503606],"genre_scores_gemma":[0.6587835,0.000029273739,0.33983785,0.0005146332,0.000077712124,0.00057432463,0.000048293496,0.000045441877,0.000088943874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99622947,0.001756952,0.000509539,0.00078239915,0.00015031091,0.00057131774],"domain_scores_gemma":[0.99833953,0.000088248176,0.00015105036,0.0011335086,0.00011623051,0.00017143847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0054186247,0.00031683806,0.00036148643,0.00007192993,0.00013853784,0.00005490163,0.0006995234,0.000305764,0.0000076487295],"category_scores_gemma":[0.0014068729,0.00024222037,0.00014387483,0.00021271875,0.00013843077,0.000002897325,0.0007131473,0.00023451021,0.000010853669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003067777,0.0006432224,0.012899488,0.000013186992,0.00020172016,0.000023631097,0.00065086514,0.00014586563,0.9125502,0.0007675904,0.000087843764,0.071709596],"study_design_scores_gemma":[0.0039343927,0.0053923894,0.021709245,0.000023430355,0.000100195444,0.000049145445,0.0023934417,0.00085466227,0.8720064,0.049886975,0.042130392,0.001519303],"about_ca_topic_score_codex":0.00007592363,"about_ca_topic_score_gemma":0.00034497786,"teacher_disagreement_score":0.07019029,"about_ca_system_score_codex":0.00008681858,"about_ca_system_score_gemma":0.0001629991,"threshold_uncertainty_score":0.987746},"labels":[],"label_agreement":null},{"id":"W2469363372","doi":"10.1007/978-1-4939-2839-2_10","title":"Detecting Allelic Expression Imbalance at Candidate Genes Using 5′ Exonuclease Genotyping Technology","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunny Hill Health Centre for Children","funders":"Medical Research Council","keywords":"Biology; Genetics; Genotyping; Allele; SNP genotyping; Gene; Amplicon; Single-nucleotide polymorphism; Genotype; Polymerase chain reaction","score_opus":0.03516077738691481,"score_gpt":0.36532083199965776,"score_spread":0.33016005461274295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2469363372","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48783118,0.00471495,0.50688183,0.00005196757,0.00019515533,0.00017834309,0.0000031846732,0.000025081994,0.00011829755],"genre_scores_gemma":[0.25090307,0.000124296,0.7484459,0.00023318149,0.000099222656,0.000058819867,0.00001915108,0.000051330702,0.00006500999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972021,0.0010703099,0.00037871528,0.0007142341,0.000087248016,0.0005474099],"domain_scores_gemma":[0.99891526,0.00003420538,0.00018653866,0.00064198085,0.00008669659,0.00013533275],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013600053,0.0002800655,0.00034931465,0.00022166199,0.00011390651,0.000014188586,0.00039848968,0.0005811321,0.000015881067],"category_scores_gemma":[0.0007782137,0.00027144846,0.00009432826,0.0002572913,0.00013702901,0.000004280044,0.0005956801,0.00016607028,0.000007766689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011218148,0.000019500703,0.002386462,0.000010235709,0.000023245631,0.000029763874,0.000032604163,0.0002659698,0.9760661,0.000116574825,0.0000067873693,0.020930534],"study_design_scores_gemma":[0.00053378654,0.0001727473,0.000023324192,0.000028284043,0.0000130678345,0.00009957069,0.00008094194,0.000470188,0.9871946,0.0029528548,0.008106126,0.00032450483],"about_ca_topic_score_codex":0.0000555372,"about_ca_topic_score_gemma":0.00002813128,"teacher_disagreement_score":0.24156405,"about_ca_system_score_codex":0.00008242247,"about_ca_system_score_gemma":0.000091371505,"threshold_uncertainty_score":0.9999738},"labels":[],"label_agreement":null},{"id":"W2469504690","doi":"10.1007/978-1-4939-3393-8_9","title":"Purification of a Recombinant Polyhistidine-Tagged Glucosyltransferase Using Immobilized Metal-Affinity Chromatography (IMAC)","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Research Council (Canada)","funders":"","keywords":"Recombinant DNA; Affinity chromatography; Chromatography; Chemistry; Protein purification; FLAG-tag; Glucosyltransferase; Myc-tag; Yield (engineering); Biochemistry; Materials science; Fusion protein; Enzyme","score_opus":0.053649684577391825,"score_gpt":0.42947343321453346,"score_spread":0.37582374863714163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2469504690","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70111763,0.0014810232,0.29586482,0.0006421531,0.00016468034,0.00039558497,0.000016935574,0.000020401541,0.00029678573],"genre_scores_gemma":[0.356168,0.0006062776,0.6428397,0.00013514615,0.00002895067,0.00004780583,0.000025426794,0.000028336584,0.00012032669],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99694294,0.0014626186,0.0005995663,0.0004317533,0.00016006538,0.00040304256],"domain_scores_gemma":[0.9987169,0.00046736596,0.000120925106,0.00042501255,0.00014022713,0.00012956426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016957086,0.00020781135,0.0006805983,0.00047504026,0.00004433578,0.0000040936015,0.00018475164,0.00020208303,0.00018582416],"category_scores_gemma":[0.00069421844,0.00013299176,0.00029772933,0.00056290074,0.00041596778,0.000028650236,0.00006465149,0.000203105,0.000005363371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065437483,0.00027070267,0.011386519,0.000091345166,0.000120738834,0.00004505782,0.000033949105,5.4837136e-7,0.95970184,0.004310607,0.000004655323,0.023379654],"study_design_scores_gemma":[0.0021029299,0.00053978513,0.0054686912,0.0001288792,0.00007755514,0.000090016714,0.0000146116645,0.00014570521,0.98391896,0.005200427,0.0021347175,0.00017774511],"about_ca_topic_score_codex":0.00034963325,"about_ca_topic_score_gemma":0.00000769435,"teacher_disagreement_score":0.3469749,"about_ca_system_score_codex":0.000054832533,"about_ca_system_score_gemma":0.0001343819,"threshold_uncertainty_score":0.54232466},"labels":[],"label_agreement":null},{"id":"W2469848870","doi":"10.1007/978-1-62703-065-6_6","title":"A Survey of Machine Learning Methods for Secondary and Supersecondary Protein Structure Prediction","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Information Technology Research Centre","keywords":"Artificial intelligence; Machine learning; Computer science","score_opus":0.014681550474874263,"score_gpt":0.36219924695537664,"score_spread":0.3475176964805024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2469848870","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2456711,0.0071530454,0.74619913,0.000013300712,0.00015381316,0.00047090082,0.00023074463,0.000008165264,0.00009978884],"genre_scores_gemma":[0.2761179,0.00004334546,0.7229642,0.000077608434,0.00004679298,0.000056121233,0.00063201226,0.000027495924,0.00003448875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965258,0.0023288953,0.00036320084,0.0003818091,0.00003850034,0.00036174257],"domain_scores_gemma":[0.9992792,0.00013233256,0.00014205844,0.00027372997,0.00009255511,0.000080114485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027048276,0.0002167879,0.00036574138,0.00011789775,0.000051176805,0.0000065032314,0.00015119738,0.00046644412,0.000018998497],"category_scores_gemma":[0.0013859867,0.00019992724,0.000077715726,0.00014073751,0.00017249152,0.000006737294,0.00016946773,0.00029560924,7.35876e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001253202,0.000016637332,0.020480318,0.000059349168,0.000059537793,2.8679773e-7,0.000054191245,0.0000118436865,0.8724002,0.00040139366,0.000003550554,0.10638734],"study_design_scores_gemma":[0.0009869278,0.00060066115,0.016412586,0.000011208758,0.000027938122,0.000035130906,0.000029621393,0.0011284697,0.9707053,0.0032529533,0.006544271,0.00026498557],"about_ca_topic_score_codex":0.00009828632,"about_ca_topic_score_gemma":0.000055797456,"teacher_disagreement_score":0.10612236,"about_ca_system_score_codex":0.000013281555,"about_ca_system_score_gemma":0.00006827052,"threshold_uncertainty_score":0.81527966},"labels":[],"label_agreement":null},{"id":"W2469986807","doi":"10.1007/978-1-4939-2877-4_6","title":"Single-Molecule Approaches for the Characterization of Riboswitch Folding Mechanisms","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Engineering and Physical Sciences Research Council","keywords":"Riboswitch; Single-molecule FRET; Förster resonance energy transfer; Folding (DSP implementation); Chemistry; Biophysics; Computational biology; RNA; Biology; Biochemistry; Non-coding RNA; Fluorescence; Physics; Gene","score_opus":0.08163588886957639,"score_gpt":0.35022619959708867,"score_spread":0.26859031072751227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2469986807","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036217906,0.00068608753,0.96172255,0.0002847939,0.00027232754,0.0006114078,0.000015692385,0.000009372097,0.00017988459],"genre_scores_gemma":[0.21214342,0.00003388926,0.7868704,0.0002678569,0.00008623223,0.00031693245,0.00014221066,0.000044655848,0.00009441261],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981931,0.0007251502,0.00031042754,0.0003987753,0.00008249093,0.0002900947],"domain_scores_gemma":[0.999104,0.00009794804,0.00019273594,0.000452278,0.0000961975,0.000056818037],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021277403,0.00018701758,0.00027004108,0.00008052965,0.000043785047,0.000013080892,0.00036773703,0.00028943276,0.000004450426],"category_scores_gemma":[0.00075516145,0.00014544083,0.00013407944,0.0001577804,0.000089950976,0.0000033082651,0.00014147526,0.00007200975,7.3418573e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000099159144,0.00004788174,0.000032208653,0.000013644789,0.00004727771,7.141703e-7,0.000055511726,0.000038068956,0.95648026,0.013211322,0.0000064742026,0.029967442],"study_design_scores_gemma":[0.00045731742,0.00047287773,0.000014512212,0.000009260346,0.000027501352,0.0000074563445,0.00010171249,0.0005631387,0.9784482,0.014813383,0.0049158763,0.00016873896],"about_ca_topic_score_codex":0.0000065676372,"about_ca_topic_score_gemma":0.0000033950644,"teacher_disagreement_score":0.17592551,"about_ca_system_score_codex":0.000016976712,"about_ca_system_score_gemma":0.00005983872,"threshold_uncertainty_score":0.59309053},"labels":[],"label_agreement":null},{"id":"W2470027415","doi":"10.1007/978-1-60327-299-5_10","title":"Analysis of the Degradome with the CLIP-CHIP™ Microarray","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chip; Computer science; Telecommunications","score_opus":0.009160635788811126,"score_gpt":0.3601625901627014,"score_spread":0.3510019543738903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2470027415","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48539478,0.00019408713,0.5126168,0.0008685244,0.000060948176,0.00028114594,0.000017619852,0.000008171194,0.00055789476],"genre_scores_gemma":[0.653596,0.000030322797,0.34481823,0.0011563066,0.000031714404,0.00015581262,0.00006819792,0.000022782096,0.00012061957],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981753,0.00074409065,0.00028375472,0.00045851443,0.00006444845,0.00027389583],"domain_scores_gemma":[0.9983698,0.00006353033,0.0001879201,0.0012580759,0.00008302254,0.00003764661],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010233157,0.0001912785,0.00029486872,0.00012579664,0.00008819652,0.000007932612,0.000802725,0.00034058111,0.00002064675],"category_scores_gemma":[0.00017211711,0.000102385806,0.0002769093,0.00088182866,0.00073778216,9.942655e-7,0.00024347642,0.0003753863,6.0450833e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021512953,0.00004030311,0.019987458,0.0000022271274,0.00027665714,6.048973e-7,0.000018234503,0.000036592202,0.9716252,0.0050060297,0.000040669027,0.002944522],"study_design_scores_gemma":[0.00021606858,0.0001243408,0.013502076,0.0000025510653,0.00025814783,0.000015760419,0.000022877832,0.00007505329,0.9521292,0.00080266065,0.032677133,0.00017412879],"about_ca_topic_score_codex":0.000057982903,"about_ca_topic_score_gemma":0.0004735197,"teacher_disagreement_score":0.16820124,"about_ca_system_score_codex":0.0000054187276,"about_ca_system_score_gemma":0.000059844053,"threshold_uncertainty_score":0.4175172},"labels":[],"label_agreement":null},{"id":"W2470117087","doi":"10.1007/978-1-60327-136-3_13","title":"Statistical Analysis of Expressed Sequence Tags","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Gene; Redundancy (engineering); Sequence (biology); Biology; Genetics; Expressed sequence tag; Sequence analysis; Computational biology; Complementary DNA; Computer science","score_opus":0.03483533191636534,"score_gpt":0.4408446101337597,"score_spread":0.40600927821739435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2470117087","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.094442435,0.0004014472,0.90407646,0.00014136625,0.000055163793,0.000087511195,0.000025880172,0.000006194991,0.0007635433],"genre_scores_gemma":[0.5372841,0.00007419695,0.46198738,0.00040843344,0.000014128747,0.000015129132,0.00016345852,0.000005904663,0.00004725467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833065,0.0006728721,0.00031869157,0.00041282192,0.00006695317,0.0001980221],"domain_scores_gemma":[0.9992708,0.00003771221,0.00011411367,0.0004613736,0.000061951214,0.00005405004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005414386,0.0001215853,0.00028476075,0.00025419254,0.000016503656,0.000004886993,0.00022980827,0.00019623565,0.00004721531],"category_scores_gemma":[0.00032441376,0.000114086964,0.000107828375,0.0005531208,0.000107120344,0.0000013759701,0.00004507624,0.00008488026,7.958405e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004642632,0.000050556482,0.0020543458,0.000002899387,0.00007800604,0.0000022909978,0.000019737976,0.00023919024,0.96734476,0.0051107276,0.00006175648,0.024989316],"study_design_scores_gemma":[0.00026488307,0.0002163637,0.011460961,0.0000041670246,0.00008912796,0.0000012062867,0.000024561836,0.0005736345,0.9779368,0.0038928266,0.0053909877,0.00014449455],"about_ca_topic_score_codex":0.000012032212,"about_ca_topic_score_gemma":0.0000038501116,"teacher_disagreement_score":0.44284168,"about_ca_system_score_codex":0.000012402501,"about_ca_system_score_gemma":0.00004871546,"threshold_uncertainty_score":0.46523315},"labels":[],"label_agreement":null},{"id":"W2470143189","doi":"10.1007/978-1-4939-3721-9_14","title":"Using Fluorescence Imaging to Track Drug Delivery and Guide Treatment Planning In Vivo","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Viron Therapeutics (Canada); University Health Network","funders":"Canadian Institutes of Health Research; Siemens USA","keywords":"Drug delivery; In vivo; Radiation treatment planning; Small interfering RNA; Tracking (education); Fluorescence-lifetime imaging microscopy; Medical physics; Biomedical engineering; Medicine; Fluorescence; Nanotechnology; Radiology; RNA; Materials science; Chemistry; Radiation therapy; Biology; Optics","score_opus":0.031158568486007843,"score_gpt":0.3939077239962708,"score_spread":0.36274915551026293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2470143189","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7435674,0.0012949496,0.2545634,0.00014200603,0.00009730513,0.00014680538,0.000008261918,0.000006252831,0.00017362896],"genre_scores_gemma":[0.4487577,0.00033301648,0.54998434,0.0006027518,0.000065648215,0.000039729388,0.0000058293335,0.000027750219,0.00018325058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816924,0.0004821073,0.0003087109,0.0005849197,0.000040980354,0.00041402056],"domain_scores_gemma":[0.9994666,0.000059095473,0.00005399423,0.00029813853,0.00003708123,0.000085068925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054629834,0.0002098915,0.00024728573,0.00019043655,0.000029449533,0.000012424683,0.00017899834,0.00011803147,0.000011100573],"category_scores_gemma":[0.00015600519,0.0001610187,0.00005922716,0.00011649873,0.00009509881,0.0000054755496,0.00016305479,0.00005692884,0.0000022065497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067476416,0.000024308281,0.04012587,0.0000031878453,0.00001463818,0.00004931276,0.000094835734,0.0000629309,0.9045339,0.000022725559,0.000040016508,0.054960784],"study_design_scores_gemma":[0.00062052446,0.00018421708,0.0011297807,0.000077219076,0.000008757179,0.000032691278,0.00009495733,0.0002690679,0.99275005,0.00034284283,0.0042477013,0.00024219461],"about_ca_topic_score_codex":0.00028972406,"about_ca_topic_score_gemma":0.00008367782,"teacher_disagreement_score":0.2954209,"about_ca_system_score_codex":0.000072123745,"about_ca_system_score_gemma":0.00006006764,"threshold_uncertainty_score":0.6566152},"labels":[],"label_agreement":null},{"id":"W2470455632","doi":"10.1007/978-1-60761-380-0_8","title":"Expression and Analysis of Exogenous Proteins in Epidermal Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Transfection; Immunoprecipitation; Immunofluorescence; Cell biology; Subcellular localization; Biology; Indirect immunofluorescence; Blot; Molecular biology; Cell culture; Antibody; Gene; Immunology; Biochemistry; Genetics; Cytoplasm","score_opus":0.01615220459647766,"score_gpt":0.34478923181003424,"score_spread":0.3286370272135566,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2470455632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75447065,0.016123086,0.22879548,0.0000825923,0.00009691357,0.00026122527,0.000008284463,0.000012536497,0.00014921014],"genre_scores_gemma":[0.7373573,0.00048541842,0.26161122,0.0003329384,0.0000030242675,0.000027767725,0.000040848918,0.000011038143,0.00013043966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995852,0.0030714846,0.00045652888,0.0002967484,0.000014126987,0.0003091257],"domain_scores_gemma":[0.9992202,0.00031416223,0.00012990521,0.000304549,0.000021874945,0.000009293338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012289132,0.00015446551,0.0006105286,0.00075732614,0.000032522257,0.0000028505099,0.00017471972,0.00035263543,0.00009522799],"category_scores_gemma":[0.00018941586,0.00013347932,0.00011698305,0.00059377187,0.00019842996,0.000024059062,0.00005273206,0.00024301425,0.0000023379023],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003504661,0.00013901129,0.001992445,0.000004710868,0.00015266643,0.000011091795,0.00040954203,0.000038435097,0.9549402,0.0003937728,0.0000016750942,0.041566],"study_design_scores_gemma":[0.00084462576,0.00035050363,0.019003352,0.000019277095,0.000058926635,0.000010305794,0.000054776814,0.000021949896,0.97782284,0.0009143642,0.0007661832,0.00013288151],"about_ca_topic_score_codex":0.00010596342,"about_ca_topic_score_gemma":0.00000844243,"teacher_disagreement_score":0.041433115,"about_ca_system_score_codex":0.000018091425,"about_ca_system_score_gemma":0.000026785649,"threshold_uncertainty_score":0.5443129},"labels":[],"label_agreement":null},{"id":"W2470573089","doi":"10.1007/978-1-4939-2877-4_17","title":"Global Mapping of Open Chromatin Regulatory Elements by Formaldehyde-Assisted Isolation of Regulatory Elements Followed by Sequencing (FAIRE-seq)","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université de Sherbrooke","funders":"","keywords":"Chromatin; Nucleosome; Enhancer; ChIA-PET; Biology; Computational biology; Epigenetics; Chromosome conformation capture; Histone; Genetics; DNA; DNA sequencing; Gene; Transcription factor","score_opus":0.025807068898462328,"score_gpt":0.3516245327689801,"score_spread":0.32581746387051774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2470573089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7128052,0.0008620795,0.28486678,0.00002795818,0.000138129,0.00042739374,0.00012408734,0.00000737198,0.0007409761],"genre_scores_gemma":[0.5291657,0.000024244659,0.47000194,0.00011136555,0.000012507397,0.000034135934,0.00055281015,0.000026085794,0.00007120286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968738,0.0008429416,0.0011447959,0.0005467799,0.00017547223,0.00041619904],"domain_scores_gemma":[0.99822587,0.000021099422,0.0007892635,0.00068301335,0.00016524961,0.000115494724],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0023647652,0.0002873222,0.0005450648,0.00009367162,0.000046316916,0.00001819602,0.00074973464,0.0003930274,0.000010245342],"category_scores_gemma":[0.0002673805,0.00031022876,0.00013308962,0.00029559174,0.00016792247,0.000013298191,0.0006705171,0.000098921075,6.4639994e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000715739,0.00008878506,0.016930316,0.000047359514,0.00013559284,0.0000015556639,0.00005905133,0.000104884886,0.97622776,0.00029199364,0.00089863956,0.005142505],"study_design_scores_gemma":[0.0036592903,0.0007956193,0.0045342245,0.0000856284,0.000060135073,0.00001780106,0.00053084455,0.004399028,0.97896814,0.003949274,0.002402647,0.0005973938],"about_ca_topic_score_codex":0.00014740294,"about_ca_topic_score_gemma":0.000034455956,"teacher_disagreement_score":0.18513514,"about_ca_system_score_codex":0.00022274979,"about_ca_system_score_gemma":0.00026547932,"threshold_uncertainty_score":0.999935},"labels":[],"label_agreement":null},{"id":"W2470861263","doi":"10.1007/978-1-60327-164-6_8","title":"Enumeration of Bacteriophages by the Direct Plating Plaque Assay","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Enumeration; Virus quantification; Agar; Microbiology; Plating (geology); Chemistry; Biology; Bacteria; Virology; Mathematics; Genetics; Combinatorics","score_opus":0.010338679379471537,"score_gpt":0.3489390780285279,"score_spread":0.3386003986490564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2470861263","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3602755,0.00018994401,0.6269147,0.0009806978,0.00021470344,0.0002183947,0.000015203283,0.000019239047,0.011171618],"genre_scores_gemma":[0.68688947,0.000023440643,0.31214646,0.000650228,0.000014019341,0.000009957665,0.000017165223,0.000006981146,0.0002423029],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866664,0.0007619582,0.00021047324,0.00018102207,0.000031124415,0.00014880455],"domain_scores_gemma":[0.99955916,0.00016170216,0.000091682145,0.00016520814,0.000004260338,0.000017953651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007160461,0.00008606036,0.00013931305,0.000022807877,0.00004793263,0.000010328368,0.00014937941,0.0000821091,0.00039612025],"category_scores_gemma":[0.00014007144,0.00006297775,0.000047881975,0.00013337596,0.000092172675,0.00004583416,0.00005191274,0.00013372343,0.000009594781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005567328,0.000024232519,0.00033180445,6.832261e-7,0.000004049793,0.0000012013671,0.000098499564,0.000052944048,0.92791605,0.000076888806,0.00010283207,0.07138525],"study_design_scores_gemma":[0.000111753136,0.00009015592,0.0123202875,0.000006325004,0.000006722626,0.0000100366915,0.00001962022,0.00022501833,0.9769353,0.00056766876,0.0096201105,0.00008695273],"about_ca_topic_score_codex":0.0002519176,"about_ca_topic_score_gemma":0.000031344633,"teacher_disagreement_score":0.32661393,"about_ca_system_score_codex":0.000038011472,"about_ca_system_score_gemma":0.0000035141918,"threshold_uncertainty_score":0.4337239},"labels":[],"label_agreement":null},{"id":"W2471011319","doi":"10.1007/978-1-4939-3130-9_13","title":"Synthetic Approach to Glycopolymer Base Nanoparticle Gold(I) Conjugate: A New Generation of Therapeutic Agents","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanoparticle-Based Drug Delivery","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Glycopolymer; Conjugate; Nanotechnology; Colloidal gold; Nanoparticle; Materials science; Polymer; Mathematics; Copolymer","score_opus":0.0881693714744237,"score_gpt":0.3719758044466499,"score_spread":0.2838064329722262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471011319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54855675,0.00047050082,0.45003065,0.00016760499,0.0002627153,0.00026080786,0.000004680723,0.000025354419,0.00022093717],"genre_scores_gemma":[0.54609406,0.0000018496216,0.45298415,0.0007423434,0.00003166191,0.000044369623,0.0000043599653,0.000019006271,0.0000781622],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962894,0.002109369,0.0004830217,0.00052095286,0.00017202973,0.00042522926],"domain_scores_gemma":[0.99886775,0.00011834683,0.000117454336,0.0005646677,0.00008855217,0.00024319947],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022831077,0.00018523641,0.0003653899,0.0001595627,0.000021865,0.000023704533,0.00033739553,0.00012712246,0.000059179245],"category_scores_gemma":[0.0005373889,0.00016640291,0.00006111279,0.0004396956,0.00014606364,0.0000622892,0.00014045558,0.000083003724,0.00008793765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102490616,0.00018090734,0.00021348229,0.000007977952,0.000009727526,0.0000074089603,0.00031404896,0.0018260448,0.98867303,0.0030893197,0.00013105631,0.005444533],"study_design_scores_gemma":[0.00083042175,0.00025189389,0.000024184079,0.000008416111,0.000026641872,0.000009594049,0.000070032096,0.007983522,0.9890107,0.0012643203,0.00033912426,0.00018118479],"about_ca_topic_score_codex":0.00027000782,"about_ca_topic_score_gemma":0.000005991594,"teacher_disagreement_score":0.0061574765,"about_ca_system_score_codex":0.00007858264,"about_ca_system_score_gemma":0.0001762818,"threshold_uncertainty_score":0.6785714},"labels":[],"label_agreement":null},{"id":"W2471028618","doi":"10.1007/978-1-61779-585-5_20","title":"Genomics Data Resources: Frameworks and Standards","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Scientific Computing and Data Management","field":"Decision Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Data science; Ontology; Computer science; Workflow; Resource (disambiguation); Semantic Web; Informatics; Knowledge management; World Wide Web; Engineering","score_opus":0.19766876649106177,"score_gpt":0.5432223343617743,"score_spread":0.34555356787071245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471028618","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028455622,0.0018931892,0.9657022,0.00038674657,0.0009830041,0.000097336764,0.00007788115,0.000018728739,0.0023852987],"genre_scores_gemma":[0.018775469,0.00002337352,0.98030436,0.00068074575,0.00007594712,0.0000028032323,0.00001949358,0.000007600515,0.00011021446],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958723,0.0020132412,0.00046059076,0.00079624687,0.00046577162,0.00039184597],"domain_scores_gemma":[0.9956648,0.0016308525,0.0001228074,0.0023698164,0.000102309146,0.00010942075],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.054526884,0.000109062734,0.00024916927,0.00028655402,0.0000779507,0.00015826331,0.0015926571,0.00018468963,0.00009512309],"category_scores_gemma":[0.019753618,0.00008220776,0.000027626005,0.00057488476,0.00021653899,0.000107344524,0.0029323506,0.00029109232,0.000014549229],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018779536,0.00004660866,0.015992962,0.0000036723134,0.000019551977,0.00000703494,0.0008035927,0.00006436323,0.006952472,0.012028603,0.006811642,0.9572507],"study_design_scores_gemma":[0.00016890449,0.000024768095,0.0024074928,0.0000064548876,0.0000091074835,0.0000075383896,0.0004419929,0.00711795,0.0005588284,0.05512157,0.9339864,0.00014898137],"about_ca_topic_score_codex":0.000029604344,"about_ca_topic_score_gemma":0.000009246603,"teacher_disagreement_score":0.95710176,"about_ca_system_score_codex":0.00004483294,"about_ca_system_score_gemma":0.000033897733,"threshold_uncertainty_score":0.9885034},"labels":[],"label_agreement":null},{"id":"W2471296736","doi":"10.1007/978-1-4939-3667-0_13","title":"Protocols for Cloning, Expression, and Functional Analysis of Sirtuin2 (SIRT2)","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sirtuins and Resveratrol in Medicine","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"SIRT2; Sirtuin; Cloning (programming); Biology; NAD+ kinase; Gene; Computational biology; Cell biology; Genetics; Enzyme; Biochemistry; Acetylation; Computer science","score_opus":0.044160656017592906,"score_gpt":0.46013347122227055,"score_spread":0.41597281520467766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471296736","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04362158,0.00039521817,0.95232904,0.0006106669,0.00007655527,0.0027679845,0.000011012742,0.000012720383,0.00017521065],"genre_scores_gemma":[0.02270568,0.000050377257,0.9733243,0.0006306049,0.00010080894,0.0026554905,0.00002955224,0.00002147119,0.00048170812],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998653,0.0003449035,0.0003884456,0.00032739015,0.000086925735,0.00019931591],"domain_scores_gemma":[0.998854,0.00054412626,0.00012411491,0.00027800805,0.00012339656,0.00007637848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012704813,0.00012357188,0.00061156123,0.00044024832,0.000023590428,0.000001964933,0.000057210305,0.00018774402,0.00011218898],"category_scores_gemma":[0.0012937869,0.00006787606,0.00015145693,0.00035939593,0.00022285918,0.000012293203,0.000047588936,0.00008670302,2.7727063e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046749975,0.000060714505,0.02809623,0.000039740728,0.00032104275,0.0000064812475,0.000027983344,0.000009063214,0.9498431,0.0019806086,0.0000638524,0.01908365],"study_design_scores_gemma":[0.007612001,0.0018790248,0.038079243,0.00033009806,0.000954331,0.00002629381,0.00006056421,0.0010188157,0.92428577,0.0046580574,0.020866998,0.00022882386],"about_ca_topic_score_codex":0.000005995258,"about_ca_topic_score_gemma":0.0000016047162,"teacher_disagreement_score":0.025557384,"about_ca_system_score_codex":0.000020616491,"about_ca_system_score_gemma":0.000044834163,"threshold_uncertainty_score":0.27679056},"labels":[],"label_agreement":null},{"id":"W2471321162","doi":"10.1007/978-1-4939-2914-6_4","title":"Nuts and Bolts of CF3 and CH3 NMR Toward the Understanding of Conformational Exchange of GPCRs","year":2015,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Process Research Ortech (Canada); University of Toronto","funders":"","keywords":"Nuts and bolts; G protein-coupled receptor; Chemistry; Engineering; Structural engineering; Biochemistry; Receptor","score_opus":0.13231987186806846,"score_gpt":0.4372882372156035,"score_spread":0.304968365347535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471321162","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030501388,0.7516788,0.24739073,0.000011425189,0.00008388559,0.00029975566,0.000051130228,0.0000013182522,0.0001779123],"genre_scores_gemma":[0.0009167719,0.9150842,0.08377044,0.000024173167,0.000032015956,0.000025376621,0.00011330687,0.000022311582,0.000011423514],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978954,0.00092017825,0.0006480845,0.0002733393,0.00009094131,0.00017204424],"domain_scores_gemma":[0.99895215,0.00012799629,0.0005394059,0.00025325938,0.00008312731,0.000044033506],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020293132,0.00022802028,0.0010094038,0.00014206667,0.000017418839,0.000004563813,0.0002128375,0.000465471,0.000012888565],"category_scores_gemma":[0.00022931612,0.00015986628,0.00015789966,0.00013003648,0.00033208786,0.00000227131,0.00024759633,0.00014758654,8.083304e-8],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006543315,0.000050789142,0.00003862828,0.010264242,0.00053852703,0.0000029307046,0.00067173655,0.0000088616,0.2783706,0.019827755,0.000044528308,0.690116],"study_design_scores_gemma":[0.0020919384,0.0020208096,0.000009831358,0.0042536515,0.00090462767,0.00018529192,0.0015330655,0.0001786868,0.24646236,0.026954038,0.7142185,0.0011871959],"about_ca_topic_score_codex":0.00001715753,"about_ca_topic_score_gemma":0.0000023354644,"teacher_disagreement_score":0.714174,"about_ca_system_score_codex":0.000018083592,"about_ca_system_score_gemma":0.00013173072,"threshold_uncertainty_score":0.6519158},"labels":[],"label_agreement":null},{"id":"W2471585615","doi":"10.1007/978-1-4939-3008-1_10","title":"Generation of Recombinant Capripoxvirus Vectors for Vaccines and Gene Knockout Function Studies","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"","keywords":"Biology; Gene knockout; Homologous recombination; Gene; Recombinant DNA; Plasmid; Genetics; Gene targeting; Virology; Molecular biology","score_opus":0.15141101313761782,"score_gpt":0.4461265304403189,"score_spread":0.29471551730270107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471585615","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5337135,0.051472526,0.41201386,0.00017895568,0.002048639,0.00047082262,0.000016599584,0.000021636173,0.00006348043],"genre_scores_gemma":[0.45907536,0.0025970538,0.53568643,0.00045831187,0.00015331493,0.00046049998,0.000343081,0.00005881345,0.0011671118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979341,0.0011708534,0.00030518157,0.00028912807,0.000017132621,0.00028359523],"domain_scores_gemma":[0.99926615,0.00026146116,0.00009581203,0.00017992519,0.00016888643,0.000027765731],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016053524,0.00013300119,0.00038064292,0.00019444055,0.00004812176,0.0000034072405,0.00009929411,0.00024105258,0.000008468433],"category_scores_gemma":[0.0014889054,0.000106959385,0.000054628144,0.00012165129,0.00016863541,0.000026956037,0.00009788321,0.00013017213,0.0000042816223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025547858,0.000036550773,0.0012098904,0.000017396582,0.00015619998,0.0000014135429,0.00018859805,0.0000076812485,0.94551057,0.0015059662,0.0003863544,0.0507239],"study_design_scores_gemma":[0.0018413953,0.0009198532,0.0005721882,0.000008315361,0.000038437713,0.00001750692,0.00015643601,0.00005211643,0.9717713,0.00954167,0.014951782,0.00012899526],"about_ca_topic_score_codex":0.00012207375,"about_ca_topic_score_gemma":0.000062930325,"teacher_disagreement_score":0.1236726,"about_ca_system_score_codex":0.000037541315,"about_ca_system_score_gemma":0.000059579437,"threshold_uncertainty_score":0.43616772},"labels":[],"label_agreement":null},{"id":"W2471875020","doi":"10.1007/978-1-59745-232-8_6","title":"Orpheus Recombination","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Race, Genetics, and Society","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Recombination; Biology; Evolutionary biology; Genetics; Gene","score_opus":0.02189344011884878,"score_gpt":0.36956243302703884,"score_spread":0.34766899290819003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2471875020","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3554362,0.0016471414,0.6392277,0.00016382743,0.0003839998,0.00016238369,0.0000038076355,0.000015818798,0.002959138],"genre_scores_gemma":[0.17477374,0.0012573476,0.821668,0.00094610837,0.00013546452,0.000049438753,0.00011349533,0.00003772093,0.0010186598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802506,0.00079606863,0.0002820309,0.00050666643,0.000062901025,0.0003272773],"domain_scores_gemma":[0.9992861,0.000033731343,0.00007947284,0.00046053246,0.00007556386,0.00006458226],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007984247,0.00017278468,0.00021930189,0.00006863642,0.00008813988,0.0000055425717,0.00024964276,0.00038931475,0.000029038094],"category_scores_gemma":[0.00043516306,0.00017762165,0.00013683524,0.00015931649,0.0002451608,0.0000016476637,0.00013196887,0.00015566897,0.00001122851],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001929365,0.00006142235,0.0062309806,0.000004766663,0.000028302115,0.00001202195,0.00011267742,0.000051628314,0.98401725,0.0007826202,0.00037250292,0.008306557],"study_design_scores_gemma":[0.00094102893,0.0003971039,0.003891289,0.00000493555,0.000010488055,0.00007976796,0.00007635809,0.00016634705,0.9336854,0.0061655245,0.054209094,0.00037261093],"about_ca_topic_score_codex":0.000021511894,"about_ca_topic_score_gemma":0.00000976681,"teacher_disagreement_score":0.18244034,"about_ca_system_score_codex":0.000023455581,"about_ca_system_score_gemma":0.00007207116,"threshold_uncertainty_score":0.72432005},"labels":[],"label_agreement":null},{"id":"W2472159305","doi":"10.1007/978-1-4939-3387-7_21","title":"The Design of a Clostridium difficile Carbohydrate-Based Vaccine","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Clostridium difficile; Microbiology; Biology","score_opus":0.038331912057063044,"score_gpt":0.39406877273316504,"score_spread":0.355736860676102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472159305","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22360368,0.0017950257,0.76907724,0.0040899115,0.00022555322,0.00077202375,0.000012074026,0.00003719305,0.00038727987],"genre_scores_gemma":[0.64001495,0.0007765404,0.35791796,0.00035026757,0.00014424969,0.00023993167,0.000015176662,0.00008385811,0.00045706698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969754,0.0011917116,0.0005907413,0.0004296331,0.00020934046,0.00060313125],"domain_scores_gemma":[0.99649614,0.0022778937,0.0001299659,0.00077625405,0.00019247661,0.00012728931],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022109286,0.00023075465,0.0005347444,0.0002661957,0.000065257234,0.00000813615,0.00032342292,0.0002579002,0.000093300536],"category_scores_gemma":[0.0024451306,0.00012112843,0.00017981924,0.000624441,0.0002718346,0.000011915537,0.0001198158,0.00028716336,0.000012811994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007592637,0.0001508502,0.00070267706,0.000023035627,0.000055952412,0.000053650852,0.000010320504,0.00003649519,0.96227425,0.0009656943,0.00013290718,0.03483489],"study_design_scores_gemma":[0.0024052758,0.0008506706,0.00014773129,0.00007366744,0.00004302948,0.000012539805,0.000019081137,0.0008155592,0.99107856,0.00093019486,0.0034795061,0.00014416718],"about_ca_topic_score_codex":0.00006091894,"about_ca_topic_score_gemma":0.000006454147,"teacher_disagreement_score":0.41641125,"about_ca_system_score_codex":0.00014089447,"about_ca_system_score_gemma":0.000359698,"threshold_uncertainty_score":0.49394742},"labels":[],"label_agreement":null},{"id":"W2472217800","doi":"10.1007/978-1-4939-1053-3_5","title":"Generation of Effective Libraries by Neutral Drift","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Neutral theory of molecular evolution; Neutral mutation; Neutral network; Positive selection; Function (biology); Sequence space; Mutagenesis; Selection (genetic algorithm); Directed evolution; Directed Molecular Evolution; Genetic drift; Diversity (politics); Sequence (biology); Mutation; Biology; Computer science; Genetics; Mathematics; Artificial intelligence; Gene; Genetic variation; Political science","score_opus":0.02390071664537779,"score_gpt":0.3670218349284165,"score_spread":0.3431211182830387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472217800","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32986087,0.00046687727,0.66585994,0.00015028258,0.00013712539,0.00014429951,0.0000015971586,0.000014349245,0.0033646405],"genre_scores_gemma":[0.27606508,0.0000103487355,0.72249,0.0011544076,0.00005917606,0.000040388804,0.000053808315,0.000010436207,0.00011634489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986275,0.00090209936,0.00016536868,0.00015928748,0.000027666149,0.00011807439],"domain_scores_gemma":[0.9994483,0.00029187457,0.000047274898,0.00014998979,0.000025827385,0.00003671201],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053988077,0.00007645399,0.00027748462,0.00008331743,0.0000114659315,0.0000028001757,0.000035089422,0.00012124359,0.000027612832],"category_scores_gemma":[0.0009015573,0.00006239922,0.000050024126,0.00011761058,0.00010404138,0.000015029932,0.000017974551,0.00008693782,0.0000024115127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031527932,0.000035277204,0.00876249,0.00001697058,0.00002366512,7.329587e-7,0.000035583907,0.000006728323,0.95404065,0.014999134,0.00018407854,0.021863142],"study_design_scores_gemma":[0.0007200738,0.00045656937,0.0022707272,0.000009966316,0.000027087368,0.0000026002751,0.000007623784,0.0013476128,0.9865186,0.0036631227,0.0049203755,0.000055593642],"about_ca_topic_score_codex":0.000018855391,"about_ca_topic_score_gemma":5.135301e-7,"teacher_disagreement_score":0.056630045,"about_ca_system_score_codex":0.000009190211,"about_ca_system_score_gemma":0.000016818449,"threshold_uncertainty_score":0.2544566},"labels":[],"label_agreement":null},{"id":"W2472729879","doi":"10.1007/978-1-59745-000-3_15","title":"Analysis of Molecular Chaperones Using a Xenopus Oocyte Protein Refolding Assay","year":2006,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Canada Research Chairs","keywords":"Xenopus; Oocyte; Cell biology; Chemistry; Computational biology; Biology; Biochemistry; Gene; Embryo","score_opus":0.07308741550468652,"score_gpt":0.47962744891630643,"score_spread":0.4065400334116199,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472729879","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012788454,0.6225309,0.37452167,0.000005758354,0.00006253511,0.0012579446,0.00007072212,0.000013207424,0.00025843593],"genre_scores_gemma":[0.00015478842,0.49106428,0.5069063,0.00003057401,0.000087662804,0.0005229873,0.0008954832,0.00019184899,0.00014610172],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9864175,0.008738148,0.0017383333,0.0016994111,0.00032859045,0.0010780273],"domain_scores_gemma":[0.9969104,0.00015114281,0.0007202255,0.0018363672,0.00021979908,0.00016208943],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.004710732,0.0008917516,0.003578321,0.0022051877,0.000073408286,0.000030375953,0.0011838384,0.0019297758,0.00003359059],"category_scores_gemma":[0.0014881917,0.0008228466,0.0015929604,0.0029793198,0.00038860415,0.000004480264,0.0009575252,0.000788758,0.0000031697703],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002843135,0.0000876486,0.000019656527,0.0016445762,0.0016730904,0.00007816434,0.000005275352,0.00020401932,0.71538377,0.00019070793,0.0000014685729,0.28068316],"study_design_scores_gemma":[0.0006487941,0.0005642883,0.000005087787,0.0021118198,0.004008682,0.00006503147,0.0000114935865,0.0009048283,0.48550433,0.0003125631,0.5041477,0.0017153885],"about_ca_topic_score_codex":0.00040023433,"about_ca_topic_score_gemma":0.000041172825,"teacher_disagreement_score":0.5041462,"about_ca_system_score_codex":0.0002281778,"about_ca_system_score_gemma":0.0006716621,"threshold_uncertainty_score":0.99942225},"labels":[],"label_agreement":null},{"id":"W2472781120","doi":"10.1007/978-1-59745-493-3_14","title":"Integrating Accelerated Tryptic Digestion into Proteomics Workflows","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Proteomics; Digestion (alchemy); Workflow; Computer science; Computational biology; Chemistry; Chromatography; Biology; Biochemistry; Database","score_opus":0.024914653402587302,"score_gpt":0.4093293430470127,"score_spread":0.3844146896444254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472781120","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07050263,0.00012865376,0.9260858,0.00037489086,0.000018979063,0.0002469678,0.0000017684591,0.00014657505,0.0024937133],"genre_scores_gemma":[0.05641284,0.000033754448,0.94292825,0.0002379419,0.00003269882,0.0002457716,0.00004114001,0.000017600025,0.000049976246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988287,0.0001499853,0.00034868615,0.0003758993,0.000037830952,0.00025889257],"domain_scores_gemma":[0.99934345,0.00007656154,0.00012253829,0.00036522173,0.00004668535,0.000045543333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037687525,0.00017543441,0.00023443531,0.00008097035,0.00006573707,0.0000195483,0.00026677284,0.00029939512,0.000046263503],"category_scores_gemma":[0.00035451513,0.00016799157,0.000060353414,0.0002892642,0.000059856917,0.000033138334,0.000054082415,0.00045333288,0.0000028921386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013340274,0.000035277735,0.000178843,0.0000063507982,0.0000038299645,0.0000031868924,0.000041745887,0.0000678355,0.855067,0.019214006,0.0000017456163,0.12536684],"study_design_scores_gemma":[0.00014479051,0.000035725454,0.000018346826,0.000029444864,0.000004546283,0.000005246241,0.000017414472,0.0019704518,0.76201016,0.2349103,0.0007033292,0.00015025646],"about_ca_topic_score_codex":0.000022028033,"about_ca_topic_score_gemma":0.0000031310478,"teacher_disagreement_score":0.21569629,"about_ca_system_score_codex":0.000106250285,"about_ca_system_score_gemma":0.000028960138,"threshold_uncertainty_score":0.6850498},"labels":[],"label_agreement":null},{"id":"W2472889759","doi":"10.1007/978-1-4614-3704-8_22","title":"Mean Net Charge of Intrinsically Disordered Proteins: Experimental Determination of Protein Valence by Electrophoretic Mobility Measurements","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Agence Nationale de la Recherche; Institut national de la recherche scientifique","keywords":"Chemistry; Intrinsically disordered proteins; Valence (chemistry); Crystallography; Protein folding; Chemical physics; Hydrodynamic radius; Biochemistry; Physical chemistry","score_opus":0.014006775537171333,"score_gpt":0.3415119431459538,"score_spread":0.32750516760878245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472889759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5242126,0.0035312814,0.47139704,0.000009433625,0.00004740291,0.0007031386,0.000018506063,0.0000046582845,0.000075931806],"genre_scores_gemma":[0.70005774,0.000023882676,0.2996092,0.000028253555,0.000018438315,0.00016708144,0.00006953074,0.000016150678,0.000009707958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975942,0.0010089355,0.0004975717,0.0003764346,0.0001392093,0.00038364631],"domain_scores_gemma":[0.99910635,0.000016092401,0.00026157312,0.0004463879,0.00010210404,0.000067472414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011042078,0.00021579303,0.00034655066,0.00007797529,0.000022603484,0.0000029822577,0.00028908433,0.00029776903,0.000015666137],"category_scores_gemma":[0.00041301537,0.00020308387,0.00010491965,0.0001655861,0.00025371762,0.000006305945,0.00015586845,0.00013543444,4.4616084e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014368961,0.00031058615,0.0034618583,0.000051428728,0.000025390542,2.6540198e-7,0.00007897858,0.000001700969,0.98664737,0.00050277053,0.0000017760137,0.008774174],"study_design_scores_gemma":[0.0005497286,0.00076991465,0.00030314064,0.000017405675,0.000011783254,0.00000387689,0.000015208017,0.00008742621,0.99683696,0.0010375734,0.00017989804,0.00018710349],"about_ca_topic_score_codex":0.000039195842,"about_ca_topic_score_gemma":0.0000052530927,"teacher_disagreement_score":0.17584513,"about_ca_system_score_codex":0.00003562062,"about_ca_system_score_gemma":0.000051240157,"threshold_uncertainty_score":0.82815194},"labels":[],"label_agreement":null},{"id":"W2472904290","doi":"10.1007/978-1-61779-231-1_18","title":"In Vivo 1H-NMR Microimaging During Seed Imbibition, Germination, and Early Growth","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; National Research Council Canada; Steacie Institute for Molecular Sciences","funders":"","keywords":"Imbibition; Germination; Magnetic resonance imaging; In vivo; Seedling; Resolution (logic); High resolution; Nuclear magnetic resonance; Materials science; Biomedical engineering; Biology; Radiology; Botany; Medicine; Computer science; Physics; Biotechnology; Remote sensing; Geology","score_opus":0.022395383201224937,"score_gpt":0.3110150220519566,"score_spread":0.28861963885073166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2472904290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9965229,0.00022599347,0.0018729733,0.00040462607,0.00008668236,0.0001382127,0.000004302302,0.000022727181,0.00072159164],"genre_scores_gemma":[0.9408347,0.00003758221,0.05846001,0.00048391387,0.000043724664,0.00003261177,0.0000061896103,0.0000020185885,0.00009924359],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99833,0.00075209007,0.00026297828,0.00035293345,0.000034711735,0.00026731266],"domain_scores_gemma":[0.99961466,0.00015763612,0.000075879005,0.000051400693,0.00005485506,0.000045549667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000575612,0.00012765152,0.00020865405,0.0000875846,0.000053502557,0.000010452358,0.00014418628,0.00015407949,0.00017628851],"category_scores_gemma":[0.00015847065,0.000067034656,0.000040396524,0.00039996873,0.0001240759,0.00006937302,0.0000828808,0.00014765073,0.0000035830035],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017852577,0.000036886293,0.04874622,0.00000587054,0.000003118971,0.000016383348,0.00029151337,1.9201251e-7,0.9462442,0.0019495398,0.0000034703492,0.0026847695],"study_design_scores_gemma":[0.00022398133,0.00007804678,0.5890808,0.000009401284,0.000002716609,0.000019404742,0.00008513386,0.000026483332,0.3811148,0.029026207,0.00018632346,0.00014670061],"about_ca_topic_score_codex":0.00062185066,"about_ca_topic_score_gemma":0.000057125282,"teacher_disagreement_score":0.5651294,"about_ca_system_score_codex":0.000018928582,"about_ca_system_score_gemma":0.0000048989946,"threshold_uncertainty_score":0.2733594},"labels":[],"label_agreement":null},{"id":"W2473178036","doi":"10.1007/978-1-61779-276-2_6","title":"Studying Binding Specificities of Peptide Recognition Modules by High-Throughput Phage Display Selections","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":35,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Computational biology; Phage display; Peptide; Profiling (computer programming); Peptide library; Genome; Biology; Gene; Peptide sequence; Computer science; Genetics; Biochemistry","score_opus":0.0561964883321013,"score_gpt":0.37351024086821116,"score_spread":0.3173137525361099,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473178036","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25770643,0.00011851214,0.73890865,0.00001109916,0.00002551537,0.000113302296,0.00007763639,0.000056370405,0.002982482],"genre_scores_gemma":[0.11682506,0.00012708067,0.8825577,0.000017598963,0.000018124643,0.00021021739,0.00009975472,0.000023458248,0.0001210115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989193,0.00014968439,0.0003503523,0.0003238572,0.000040870735,0.0002159548],"domain_scores_gemma":[0.99937004,0.00011040449,0.00017364042,0.00027343686,0.00004515965,0.000027299235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032857238,0.00014279284,0.00024263238,0.000094769195,0.000070633294,0.0000048392108,0.00017751579,0.00016510088,0.00017144348],"category_scores_gemma":[0.000095561634,0.00014794634,0.00006254264,0.00020130446,0.00013815108,0.00003752552,0.000077839955,0.0002288453,0.0000029236533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011570378,0.00008503413,0.00054228463,0.000020864782,0.00002203797,0.0000015943702,0.0001436617,0.0000046875607,0.98099464,0.006763492,0.000015507794,0.0113946125],"study_design_scores_gemma":[0.00014789174,0.00003502588,0.000020313797,0.000023859511,0.000015260688,0.0000047380436,0.00020010726,0.00006254322,0.9208929,0.07792953,0.0005249351,0.00014288105],"about_ca_topic_score_codex":0.000163026,"about_ca_topic_score_gemma":0.0000070487877,"teacher_disagreement_score":0.14364904,"about_ca_system_score_codex":0.00005254348,"about_ca_system_score_gemma":0.000009906799,"threshold_uncertainty_score":0.60330766},"labels":[],"label_agreement":null},{"id":"W2473766466","doi":"10.1007/978-1-62703-011-3_8","title":"Engineering of Large Deletions and Duplications In Vivo","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Limiting; Subcloning; Biology; Insertional mutagenesis; Transgene; Gene; Computational biology; Genetics; Stem cell; Cell biology; Genome; Engineering; Recombinant DNA","score_opus":0.012458061833912133,"score_gpt":0.35242424333669076,"score_spread":0.33996618150277863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473766466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5649387,0.0012703269,0.43344945,0.00003326032,0.000047366422,0.00007078152,0.0000037943746,0.0000022020922,0.00018409325],"genre_scores_gemma":[0.60263723,0.00008113895,0.39716512,0.00004630321,0.000015535508,0.00002311211,0.0000064392166,0.000008466067,0.00001667192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999169,0.00016330503,0.00020920485,0.0001749362,0.000021202752,0.0002623594],"domain_scores_gemma":[0.9996609,0.00003081846,0.00004241225,0.00020684497,0.000017596445,0.00004144755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006896855,0.00008505004,0.00014175616,0.00010377352,0.00001196122,0.0000020720965,0.00008524977,0.00013435479,0.000014280709],"category_scores_gemma":[0.00029172646,0.000089216315,0.000034400506,0.00013352933,0.000035257228,0.0000014981283,0.0001278718,0.00007003158,5.5085525e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[9.734946e-7,0.000037322763,0.06601699,0.000009500875,0.000008293114,1.743452e-7,0.000037430487,0.00004721319,0.93001246,0.0023407054,0.000003290674,0.001485621],"study_design_scores_gemma":[0.00040546904,0.00006638546,0.06620741,0.000012713302,0.000008243455,0.00002807196,0.000060927745,0.00041186836,0.9201255,0.00026305515,0.012247935,0.0001624501],"about_ca_topic_score_codex":0.000019073068,"about_ca_topic_score_gemma":0.0000075625217,"teacher_disagreement_score":0.037698492,"about_ca_system_score_codex":0.0000058946903,"about_ca_system_score_gemma":0.000011683176,"threshold_uncertainty_score":0.36381358},"labels":[],"label_agreement":null},{"id":"W2473940319","doi":"10.1007/978-1-4939-3130-9_15","title":"Modulation of Multivalent Protein Binding on Surfaces by Glycopolymer Brush Chemistry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Glycopolymer; Brush; Chemistry; Biophysics; Nanotechnology; Materials science; Biology; Organic chemistry; Polymer","score_opus":0.03556628504783352,"score_gpt":0.40400664245480156,"score_spread":0.368440357406968,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473940319","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85458297,0.00068126497,0.14248244,0.00012640779,0.000067999084,0.00041812906,0.000027872466,0.0000111653235,0.0016017458],"genre_scores_gemma":[0.8739369,0.000023638606,0.124177344,0.00006188832,0.000036869682,0.00008647497,0.0002383869,0.000032906086,0.0014055701],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785763,0.0007965423,0.00036006342,0.00048226316,0.00017824004,0.00032527983],"domain_scores_gemma":[0.999165,0.000031269043,0.00014056587,0.00041995023,0.0001244874,0.00011875229],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00117025,0.00019576159,0.00025389183,0.00009887154,0.0000280538,0.0000096620515,0.00025555133,0.00034476275,0.00004295545],"category_scores_gemma":[0.0008475769,0.00018573551,0.0000837994,0.0002296232,0.00015772672,0.0000033627746,0.00014150959,0.0001861221,0.000007236231],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020463683,0.00011287992,0.0012964363,0.00002285909,0.000026732392,0.0000029628143,0.000024285891,0.00037792246,0.9915066,0.00011080549,0.0000961704,0.0062177214],"study_design_scores_gemma":[0.0010111753,0.0003349642,0.00010600682,0.000020937918,0.000003249204,0.000003165112,0.000048615024,0.00091897417,0.9914013,0.00037188883,0.005592148,0.0001875595],"about_ca_topic_score_codex":0.000086769774,"about_ca_topic_score_gemma":0.0000041695166,"teacher_disagreement_score":0.019353945,"about_ca_system_score_codex":0.0000416515,"about_ca_system_score_gemma":0.00009519262,"threshold_uncertainty_score":0.7574074},"labels":[],"label_agreement":null},{"id":"W2473982077","doi":"10.1007/978-1-4939-3512-3_17","title":"Optogenetic Approaches for Mesoscopic Brain Mapping","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photoreceptor and optogenetics research","field":"Neuroscience","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Optogenetics; Neuroscience; Opsin; Channelrhodopsin; Population; Transgene; Biology; Computer science; Medicine; Gene; Genetics","score_opus":0.19743079808548164,"score_gpt":0.468339600680564,"score_spread":0.2709088025950824,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2473982077","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.071335554,0.0002097361,0.92572916,0.0009713376,0.0002042775,0.0005182208,0.000015107473,0.000025306255,0.0009912979],"genre_scores_gemma":[0.14415798,0.0000555596,0.8541548,0.0007567191,0.000051191004,0.00038836495,0.0000023908663,0.000036495432,0.00039649344],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968004,0.0016684451,0.00025593909,0.00062502176,0.0000933571,0.00055680814],"domain_scores_gemma":[0.9977793,0.0017023275,0.00004974433,0.00036367564,0.000020062775,0.000084850326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001337909,0.00015434157,0.00024052161,0.00024244029,0.00006520159,0.000015446161,0.00049152673,0.00016521505,0.000059790684],"category_scores_gemma":[0.0037546563,0.0001095904,0.00009298498,0.0002990185,0.00026232,0.00001878392,0.00018022646,0.000103317994,0.000013259202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019705012,0.000024629255,0.00071982836,0.0000121858475,0.0000040303885,0.0000030463966,0.000043547843,0.0000055544256,0.91192496,0.009229981,0.000016186113,0.07799636],"study_design_scores_gemma":[0.0005901932,0.0001341847,0.00019791588,0.000012719968,0.0000019389468,0.0000050606154,0.0000103361335,0.0004360005,0.9529021,0.034807097,0.010752103,0.00015037194],"about_ca_topic_score_codex":0.0000040122154,"about_ca_topic_score_gemma":0.0000014657238,"teacher_disagreement_score":0.07784599,"about_ca_system_score_codex":0.000050857067,"about_ca_system_score_gemma":0.000052993062,"threshold_uncertainty_score":0.44949457},"labels":[],"label_agreement":null},{"id":"W2474129605","doi":"10.1007/978-1-4939-0844-8_19","title":"Isolation and Characterization of Ice-Binding Proteins from Higher Plants","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Computational biology; Isolation (microbiology); Ice crystals; Characterization (materials science); Function (biology); Recombinant DNA; Biology; Chemistry; Cell biology; Biophysics; Biochemistry; Nanotechnology; Bioinformatics; Materials science; Geography; Gene","score_opus":0.022944318991205,"score_gpt":0.3090266513972476,"score_spread":0.28608233240604264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474129605","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61749494,0.0000040262867,0.38214582,0.000049452578,0.000020581423,0.00005247806,0.0000058583,0.0000042913207,0.00022255786],"genre_scores_gemma":[0.69513845,0.0000038762996,0.30468753,0.000087533386,0.000008674862,0.000008383349,0.00004885434,0.0000020181747,0.00001467907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999304,0.00029345232,0.00012303298,0.00016786359,0.000028847373,0.00008278681],"domain_scores_gemma":[0.9997558,0.0000959149,0.000057337762,0.00006786458,0.0000021214491,0.000020984324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00017492069,0.000053123124,0.00010393964,0.000015364505,0.000015900538,0.0000022286565,0.000060755854,0.00008161763,0.0001454889],"category_scores_gemma":[0.00007482084,0.000040519062,0.000013863514,0.00006939925,0.00008858405,0.0000217696,0.000075141,0.00005082823,0.000006159463],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007517592,0.000017694198,0.006731699,0.000001172406,0.0000019494832,1.3501057e-7,0.000018575154,0.0000055392456,0.9792497,0.00033789795,3.1082791e-7,0.013627807],"study_design_scores_gemma":[0.000111563975,0.00005399582,0.1470215,0.0000051169263,0.000002474431,1.3663879e-7,0.0000019391516,0.001313383,0.8296417,0.021445699,0.00034144873,0.000061010593],"about_ca_topic_score_codex":0.00007136799,"about_ca_topic_score_gemma":0.0000023772095,"teacher_disagreement_score":0.14960799,"about_ca_system_score_codex":0.000009889874,"about_ca_system_score_gemma":8.8570215e-7,"threshold_uncertainty_score":0.16523194},"labels":[],"label_agreement":null},{"id":"W2474322740","doi":"10.1007/978-1-4939-3299-3_14","title":"Methods in the Study of PTEN Structure: X-Ray Crystallography and Hydrogen Deuterium Exchange Mass Spectrometry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PI3K/AKT/mTOR signaling in cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Hydrogen–deuterium exchange; PTEN; Mass spectrometry; Chemistry; Biophysics; Deuterium; Phosphorylation; Membrane; Crystallography; Biochemistry; Biology; Chromatography; Signal transduction; Physics","score_opus":0.03061697368454208,"score_gpt":0.3951603977850663,"score_spread":0.3645434241005242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474322740","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5879329,0.005298321,0.40586087,0.0000573415,0.00016912112,0.00047346548,0.000014925997,0.000007105269,0.0001859575],"genre_scores_gemma":[0.45230165,0.000060651597,0.5471884,0.0002625385,0.000066266446,0.00006656787,0.000020572119,0.000026795173,0.000006539449],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99297523,0.005255344,0.0004970183,0.00069167477,0.00015003365,0.00043066623],"domain_scores_gemma":[0.99872285,0.00015881518,0.00019154417,0.0007640979,0.00007884666,0.00008382678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004020407,0.0003015353,0.00050424144,0.00035619622,0.00002808829,0.00001586245,0.00062880624,0.00037072392,0.000012071006],"category_scores_gemma":[0.00049975625,0.00023775728,0.000102048056,0.00067532936,0.00027154668,0.000004378706,0.00028449894,0.00030707987,1.8487877e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010228999,0.00012041859,0.014961108,0.000020780679,0.00012301547,0.000025248713,0.0006004963,0.00015439458,0.9790782,0.000067113804,0.000019077324,0.00472791],"study_design_scores_gemma":[0.003123923,0.003221326,0.005472188,0.000017544413,0.00010733956,0.00006204511,0.001762465,0.00021492406,0.9665493,0.011082489,0.0077649807,0.00062151015],"about_ca_topic_score_codex":0.00011752637,"about_ca_topic_score_gemma":0.000067370696,"teacher_disagreement_score":0.14132755,"about_ca_system_score_codex":0.00003093987,"about_ca_system_score_gemma":0.00006137243,"threshold_uncertainty_score":0.9695461},"labels":[],"label_agreement":null},{"id":"W2474644198","doi":"10.1007/978-1-62703-339-8_7","title":"Lupus Anticoagulant Testing","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Systemic Lupus Erythematosus Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton; St. Joseph's Hospital; Calgary Laboratory Services; McMaster University","funders":"","keywords":"Lupus anticoagulant; Systemic lupus erythematosus; Medicine; Autoantibody; Antiphospholipid syndrome; Antibody; Immunology; Avidity; Internal medicine; Disease","score_opus":0.06844739588524104,"score_gpt":0.44430567798737064,"score_spread":0.37585828210212957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474644198","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5298446,0.0009316025,0.46126407,0.00056048925,0.00028029107,0.00079799996,5.6417423e-7,0.00006654897,0.006253845],"genre_scores_gemma":[0.058671467,0.000014523469,0.9400035,0.00052705477,0.00005456475,0.00012857211,0.0000054559637,0.00003113039,0.0005637451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99761623,0.0010328157,0.00037187847,0.00036799902,0.000120965604,0.0004900974],"domain_scores_gemma":[0.9985909,0.00060790556,0.00006169992,0.00047253788,0.00014471675,0.0001222373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014265452,0.00014869723,0.00045962018,0.0002761607,0.000025449119,0.000012875666,0.00016562853,0.00019875003,0.00016624344],"category_scores_gemma":[0.0031293982,0.00011499556,0.00006941787,0.00046778514,0.00013307025,0.000020112077,0.00012491248,0.00029452128,0.00015066199],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000068945374,0.000030742754,0.31738412,0.00007625872,0.000020363117,0.00008604282,0.00005971485,0.0000012835203,0.6672475,0.00044496465,0.000081913684,0.0145602105],"study_design_scores_gemma":[0.0085659465,0.0017016059,0.03636273,0.0013623781,0.0001262306,0.06394812,0.0011441789,0.019722419,0.8079315,0.049706716,0.008184378,0.0012438158],"about_ca_topic_score_codex":0.0002476486,"about_ca_topic_score_gemma":0.00000185099,"teacher_disagreement_score":0.4787394,"about_ca_system_score_codex":0.00007726528,"about_ca_system_score_gemma":0.00008327581,"threshold_uncertainty_score":0.46893826},"labels":[],"label_agreement":null},{"id":"W2474763530","doi":"10.1007/978-1-4939-3106-4_13","title":"Statistical Method for Integrative Platform Analysis: Application to Integration of Proteomic and Microarray Data","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Microarray analysis techniques; Data integration; Computer science; Computational biology; Microarray databases; Statistical analysis; Data science; Data mining; Biology; Statistics; Mathematics","score_opus":0.05957102135903995,"score_gpt":0.4650694715735104,"score_spread":0.40549845021447045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474763530","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011102981,0.00022673479,0.9875887,0.00016960752,0.00004897507,0.00067250576,0.00011477753,0.000004650451,0.00007105195],"genre_scores_gemma":[0.06521218,0.000014493726,0.9331452,0.00016511875,0.000024317824,0.0003006451,0.0010988045,0.00001079405,0.000028402994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845904,0.00046109039,0.00032280138,0.000564515,0.00005126579,0.00014128334],"domain_scores_gemma":[0.99899507,0.00006130666,0.00013080033,0.0005778178,0.00015179651,0.00008322816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017018579,0.00012869846,0.00027136615,0.00021001099,0.000017120588,0.000008415408,0.0002763395,0.0001747822,0.0000018203149],"category_scores_gemma":[0.0009721304,0.00010689318,0.000039201997,0.00032895672,0.00006738738,0.000004190601,0.00016292334,0.000072373135,3.8330398e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019250983,0.000027861402,0.00039322156,0.0000066157245,0.00007404748,8.269482e-8,0.000115524526,0.00007002969,0.9195348,0.0028458443,0.0001426403,0.0765968],"study_design_scores_gemma":[0.0004829468,0.00033666636,0.00055520475,0.0000064975684,0.000091967624,0.0000017589874,0.00032062462,0.010065547,0.97794163,0.0049292576,0.0051309117,0.00013699764],"about_ca_topic_score_codex":0.00006395981,"about_ca_topic_score_gemma":0.00007715956,"teacher_disagreement_score":0.076459795,"about_ca_system_score_codex":0.000022258757,"about_ca_system_score_gemma":0.00008546908,"threshold_uncertainty_score":0.43589774},"labels":[],"label_agreement":null},{"id":"W2474771375","doi":"10.1007/978-1-4939-3684-7_7","title":"Microfluidic-Based Live-Cell Analysis of NK Cell Migration In Vitro","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Health Canada; Research Manitoba; Manitoba Health Research Council","keywords":"Chemokinesis; Chemotaxis; Cell biology; Cell migration; Cell; Chemokine receptor; Chemokine; Live cell imaging; Biology; Population; Receptor; Biochemistry; Medicine","score_opus":0.012469956568205993,"score_gpt":0.3129650486550845,"score_spread":0.3004950920868785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2474771375","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37124136,0.005714388,0.62127256,0.00017922386,0.0008326007,0.00015744932,0.000009568478,0.00001835923,0.00057446887],"genre_scores_gemma":[0.93146217,0.0007974392,0.06458397,0.00057870743,0.000009290473,0.000055120076,0.00031124102,0.000024820694,0.002177268],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99653786,0.0022872996,0.00053046533,0.00035504054,0.000017353044,0.00027197454],"domain_scores_gemma":[0.998922,0.00047136642,0.000205024,0.00032376053,0.00006622599,0.0000116066085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009008586,0.00016284495,0.00046652983,0.0009865909,0.000023088623,0.000002738311,0.00016615515,0.00038653892,0.00079581834],"category_scores_gemma":[0.00018755099,0.00012513238,0.00021867438,0.0006029908,0.00014641385,0.00003158017,0.000040443723,0.00019684464,0.00007842647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036089687,0.00020453769,0.004614855,0.000010636089,0.00010738857,0.000002546609,0.00009183396,0.0000114669865,0.9887514,0.000043421373,0.00017761155,0.0056234235],"study_design_scores_gemma":[0.0013412616,0.00017359707,0.001073263,0.0000126267305,0.000121224795,0.0000013444123,0.00006398817,0.00006096382,0.9835984,0.00006214013,0.013352425,0.00013875937],"about_ca_topic_score_codex":0.0003588175,"about_ca_topic_score_gemma":0.000031905904,"teacher_disagreement_score":0.5602208,"about_ca_system_score_codex":0.00007399205,"about_ca_system_score_gemma":0.000042362197,"threshold_uncertainty_score":0.8713653},"labels":[],"label_agreement":null},{"id":"W2475255795","doi":"10.1007/978-1-59745-519-0_14","title":"Fourier Transform Infrared Spectroscopy in the Study of Lipid Phase Transitions in Model and Biological Membranes","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale","keywords":"Fourier transform infrared spectroscopy; Characterization (materials science); Fourier transform; Membrane; Spectroscopy; Biological membrane; Infrared; Infrared spectroscopy; Fourier transform spectroscopy; Phase (matter); Chemistry; Analytical Chemistry (journal); Materials science; Lipid bilayer; Nanotechnology; Chemical engineering; Chromatography; Optics; Physics; Organic chemistry; Engineering; Biochemistry","score_opus":0.07452441062669524,"score_gpt":0.4647445062845378,"score_spread":0.39022009565784255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475255795","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.079577774,0.85045743,0.06482222,0.000051824445,0.00021733358,0.003968365,0.00014122202,0.0000116699475,0.00075215905],"genre_scores_gemma":[0.00277517,0.90120345,0.094781384,0.00017511133,0.00012625479,0.00048187876,0.00037192172,0.00005948421,0.000025357816],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.995292,0.0022540411,0.0010782798,0.00078803394,0.00010619674,0.00048141723],"domain_scores_gemma":[0.99902135,0.00012963495,0.00018318847,0.00058067846,0.000029668372,0.0000554856],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021243265,0.00051175174,0.0015459226,0.00048514942,0.00003246781,0.000010783164,0.0005178392,0.0009854314,0.00000937012],"category_scores_gemma":[0.00013118747,0.00033933477,0.0002886861,0.00057056756,0.00026936576,0.000003880584,0.00007827405,0.00068129494,2.1636636e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003317012,0.0023380863,0.00015086995,0.0018126733,0.0001689706,0.00014291241,0.0015053746,0.000056178214,0.37255108,0.00026920618,0.0000074527165,0.6206655],"study_design_scores_gemma":[0.028403832,0.016396832,0.00020921408,0.0028443339,0.0023534494,0.00085288193,0.0038624124,0.00054061814,0.1258401,0.004924529,0.80876,0.0050118277],"about_ca_topic_score_codex":0.000026591608,"about_ca_topic_score_gemma":0.00019151662,"teacher_disagreement_score":0.80875254,"about_ca_system_score_codex":0.00002467224,"about_ca_system_score_gemma":0.00013743591,"threshold_uncertainty_score":0.9999059},"labels":[],"label_agreement":null},{"id":"W2475435998","doi":"10.1007/978-1-59745-548-0_15","title":"Assembling DNA Barcodes","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":389,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Barcode; DNA barcoding; Identification (biology); Computational biology; Biology; Kingdom; Evolutionary biology; Computer science; Ecology","score_opus":0.05846406047343634,"score_gpt":0.422726206296243,"score_spread":0.3642621458228067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2475435998","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24990563,0.0005585711,0.7466829,0.00018100292,0.00027079877,0.00012419061,0.0000037708894,0.000020008198,0.0022531347],"genre_scores_gemma":[0.46357384,0.00021146577,0.53452235,0.0005557542,0.00007846463,0.000062005805,0.00012805882,0.000027482038,0.0008405629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981193,0.0007413272,0.00033675577,0.00047740835,0.00006336475,0.00026184856],"domain_scores_gemma":[0.9992057,0.000039232596,0.00009240938,0.00051812036,0.000087019165,0.000057493475],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008351717,0.00014557071,0.00017414734,0.00014950905,0.00009136555,0.000010453378,0.00028765324,0.00023529257,0.00004176646],"category_scores_gemma":[0.00055981043,0.00014987156,0.000097487,0.00023024759,0.00018660337,0.0000024639387,0.00009430798,0.00012432618,0.000030475268],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001307236,0.00004528873,0.0024638313,0.0000043360615,0.000017848448,0.0000045252286,0.000034702938,0.000027416692,0.9901561,0.0049137236,0.00020710359,0.0021120165],"study_design_scores_gemma":[0.00029090213,0.00006565119,0.0018281856,0.0000034926186,0.0000047035687,0.000046852252,0.000029202733,0.00009334796,0.9521759,0.0007072018,0.044569217,0.0001853003],"about_ca_topic_score_codex":0.00000935213,"about_ca_topic_score_gemma":0.0000050867143,"teacher_disagreement_score":0.21366821,"about_ca_system_score_codex":0.0000123550035,"about_ca_system_score_gemma":0.000060243732,"threshold_uncertainty_score":0.6111585},"labels":[],"label_agreement":null},{"id":"W2476870299","doi":"10.1007/978-1-4939-3302-0_15","title":"Accurate Assessment of Cell Death by Imaging Flow Cytometry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Flow cytometry; Medicine; Immunology","score_opus":0.023582041962874684,"score_gpt":0.40169472031751996,"score_spread":0.3781126783546453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2476870299","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05794588,0.0017515772,0.93791014,0.00004668502,0.00024930065,0.00016000273,0.000015583959,0.0000082937795,0.0019125346],"genre_scores_gemma":[0.29123718,0.00010133637,0.7081355,0.00014128591,0.000032738877,0.000016618078,0.00017599152,0.000021078282,0.00013832192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822474,0.00067239586,0.00033349582,0.00040632632,0.00009064779,0.00027237233],"domain_scores_gemma":[0.9992708,0.00002653155,0.00014602614,0.0003690421,0.000098136945,0.000089453366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012770738,0.00017597614,0.00025872444,0.00012668046,0.000020523998,0.000008834596,0.00021100945,0.00021294501,0.000012402385],"category_scores_gemma":[0.00012253027,0.00016205925,0.00009302612,0.00018108463,0.000065894565,0.000002962549,0.0001739438,0.00011693046,0.0000010682531],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001863409,0.0000681077,0.0038129652,0.000011709277,0.000016284474,0.000004962639,0.000013649158,0.00046835653,0.986789,0.0003494053,0.00011205841,0.008334902],"study_design_scores_gemma":[0.00082666223,0.00022810495,0.0005492111,0.000006507637,0.000016793336,0.0000104457,0.00004641061,0.009126632,0.98004997,0.0019373724,0.0069920057,0.00020986516],"about_ca_topic_score_codex":0.000021923088,"about_ca_topic_score_gemma":0.0000018170948,"teacher_disagreement_score":0.23329128,"about_ca_system_score_codex":0.000031031635,"about_ca_system_score_gemma":0.00009716396,"threshold_uncertainty_score":0.66085845},"labels":[],"label_agreement":null},{"id":"W2478279870","doi":"10.1007/978-1-61779-474-2","title":"Ubiquitin Family Modifiers and the Proteasome","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Medical Research Council; College of Pharmacy, University of Kentucky; University of North Carolina at Chapel Hill; School of Medicine, New York University; Universität zu Köln; Directorate for Biological Sciences; Euskal Herriko Unibertsitatea; National Institutes of Health; Rheinische Friedrich-Wilhelms-Universität Bonn; Technische Universität München; Universität Konstanz; Deutsches Krebsforschungszentrum; Centre National de la Recherche Scientifique; Yale University; University of Toronto; Universität Stuttgart; York University; Wellcome Trust; Julius-Maximilians-Universität Würzburg; Universität Heidelberg; University of Dundee; Genentech; RIKEN; Louisiana State University; U.S. National Library of Medicine; University of Pittsburgh; California Institute of Technology; Takeda Oncology; University of Minnesota; Massachusetts Institute of Technology","keywords":"Ubiquitin; Proteasome; Cell biology; Ubiquitins; Ubiquitin ligase; Chemistry; Computational biology; Biology; Biochemistry; Gene","score_opus":0.02548787774904531,"score_gpt":0.3424186366635732,"score_spread":0.3169307589145279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2478279870","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0029795605,0.09070214,0.5075585,0.0006637903,0.001139944,0.004421313,0.00017346721,0.00006690356,0.39229435],"genre_scores_gemma":[0.0025905063,0.004742344,0.69702005,0.0076012374,0.002109386,0.0023740558,0.0013157468,0.0004850972,0.2817616],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.995169,0.0025889187,0.000553188,0.00085492467,0.00013085298,0.0007031388],"domain_scores_gemma":[0.99839395,0.0001810917,0.00029381466,0.0009101635,0.000074224015,0.00014674448],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0035209414,0.0005767042,0.0007697398,0.00016319624,0.00009800446,0.000031583022,0.0006062163,0.0013926461,0.000033509805],"category_scores_gemma":[0.0005310839,0.00043130884,0.0002815212,0.0000915309,0.0011411902,0.000002666893,0.0006594764,0.0008106491,0.000016063641],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047602417,0.000049033802,0.00008202898,0.0001626841,0.0002902543,0.00002051987,0.00018619628,0.0000062149106,0.879715,0.07278994,0.0017709483,0.044451103],"study_design_scores_gemma":[0.002886407,0.0003544948,0.00003915097,0.00009728927,0.00014174583,0.000098303804,0.00004685241,0.00004243293,0.1853123,0.076858796,0.73309547,0.0010267488],"about_ca_topic_score_codex":0.000024715908,"about_ca_topic_score_gemma":0.0000061280784,"teacher_disagreement_score":0.7313245,"about_ca_system_score_codex":0.000048888058,"about_ca_system_score_gemma":0.00027588365,"threshold_uncertainty_score":0.99990374},"labels":[],"label_agreement":null},{"id":"W2480898824","doi":"10.1007/978-1-59745-561-9","title":"Gene Therapy of Cancer","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"College of Medicine, University of Florida; National Cancer Institute; National Institutes of Health; Tianjin Medical University; Fukuoka University; Dankook University; Academia Sinica; University of Wisconsin-Madison; McGill University; University of Louisville; Celator Pharmaceuticals; University of Minnesota; Agricultural Biotechnology Research Center, Academia Sinica; Università degli Studi di Padova; Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa; Deutsches Krebsforschungszentrum; Rutgers Cancer Institute of New Jersey; Massachusetts General Hospital; McKnight Foundation","keywords":"Genetic enhancement; Cancer therapy; Cancer; Medicine; Cancer treatment; Gene; Biology; Internal medicine; Genetics","score_opus":0.038032576235219044,"score_gpt":0.4480901876405271,"score_spread":0.41005761140530805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2480898824","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.056211326,0.51991487,0.26882175,0.0007389905,0.0012711958,0.0041512735,0.00045420034,0.00008867295,0.14834772],"genre_scores_gemma":[0.00073267013,0.0898317,0.6906368,0.0045795804,0.001312808,0.000522572,0.0019275211,0.00052821275,0.20992811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963453,0.0014458699,0.00059791375,0.000884918,0.00017296652,0.0005530759],"domain_scores_gemma":[0.99829274,0.00006349827,0.0002956739,0.0010777294,0.00017624306,0.00009408501],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014101604,0.00047934605,0.0007883218,0.00033327183,0.000028005365,0.00000771601,0.00080776913,0.0012795742,0.00015826216],"category_scores_gemma":[0.00012909362,0.00045951692,0.00034924,0.00016790409,0.00034917297,0.0000010441938,0.00019258435,0.0005073243,0.0000050979506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083200634,0.000060539976,0.00006843186,0.000016456916,0.00022030046,0.000014065209,0.000012103674,0.00005962597,0.8336797,0.0001559667,0.00083837425,0.16404247],"study_design_scores_gemma":[0.00081925135,0.002775214,0.000026355083,0.000031114712,0.000013940528,0.0000051985644,0.00000145789,0.0000070213537,0.85688454,0.007281313,0.13177119,0.00038338584],"about_ca_topic_score_codex":0.000037808677,"about_ca_topic_score_gemma":0.00010511446,"teacher_disagreement_score":0.43008316,"about_ca_system_score_codex":0.00008446261,"about_ca_system_score_gemma":0.00082669395,"threshold_uncertainty_score":0.99978566},"labels":[],"label_agreement":null},{"id":"W2483323917","doi":"10.1007/978-1-61779-148-2","title":"Gel-Free Proteomics","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre for Blood Research, University of British Columbia; Norges Miljø- og Biovitenskapelige Universitet; Technion-Israel Institute of Technology; Universitetet i Oslo; Université de Montréal; Branco Weiss Fellowship – Society in Science; Universiteit Gent; Universiteit van Amsterdam; Institut National de la Santé et de la Recherche Médicale; University of Ottawa","keywords":"Proteomics; Proteome; Mass spectrometry; Two-dimensional gel electrophoresis; Computational biology; Chemistry; Computer science; Biology; Chromatography; Bioinformatics; Biochemistry","score_opus":0.029357246563538855,"score_gpt":0.3844763806380861,"score_spread":0.35511913407454726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2483323917","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008486458,0.00049509277,0.61840516,0.000035031502,0.000033872875,0.00029801062,0.00006617287,0.00010545648,0.38055274],"genre_scores_gemma":[7.4853114e-7,0.00022098594,0.8519925,0.00015600756,0.0000885198,0.00079306075,0.00018228256,0.0000993799,0.14646654],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99819577,0.00012689971,0.0005103842,0.00072354317,0.000058823443,0.00038457842],"domain_scores_gemma":[0.9977975,0.00010744817,0.00032659704,0.001642688,0.000057203586,0.000068549205],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00047800774,0.00039700852,0.0005786823,0.00014187238,0.000039821272,0.000008594718,0.0011332044,0.0014009699,0.00049157767],"category_scores_gemma":[0.00023818058,0.00041480386,0.00019340444,0.00007389297,0.00023557317,0.0000135061355,0.0005921799,0.001105605,0.000018888291],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017329608,0.000034618224,0.000014270118,0.0000977002,0.000039415885,0.000020304951,0.000019831767,0.0000017332746,0.76355755,0.21919967,0.0006265894,0.016370958],"study_design_scores_gemma":[0.000113565555,0.000014382201,1.1894873e-7,0.000036191188,0.000014706026,0.000008355973,9.242911e-7,0.000010113434,0.34679085,0.46704918,0.1857256,0.00023603051],"about_ca_topic_score_codex":0.000017931095,"about_ca_topic_score_gemma":0.000004241891,"teacher_disagreement_score":0.41676673,"about_ca_system_score_codex":0.00021405824,"about_ca_system_score_gemma":0.00018184743,"threshold_uncertainty_score":0.9998954},"labels":[],"label_agreement":null},{"id":"W2483377380","doi":"10.1007/978-1-61737-988-8","title":"Plant Embryo Culture","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Embryo culture; Embryo; Biology; Cell biology; Embryogenesis","score_opus":0.024247333537198035,"score_gpt":0.33700241161567007,"score_spread":0.312755078078472,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2483377380","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017337232,0.0522418,0.4972923,0.000092670976,0.0015933507,0.0008227295,0.00038680885,0.000054619384,0.44734234],"genre_scores_gemma":[0.000025928794,0.001978961,0.3121634,0.0008227844,0.0007555122,0.00007921477,0.00858966,0.000096294694,0.67548823],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976917,0.00060309435,0.00041233207,0.00083089864,0.00007502639,0.00038693158],"domain_scores_gemma":[0.99899286,0.000016286944,0.00020610595,0.000624847,0.000070116366,0.00008979851],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00049525604,0.00046831308,0.0005279443,0.00013467818,0.00005020681,0.000012877235,0.00046558792,0.0019575532,0.0000603727],"category_scores_gemma":[0.00013538002,0.0003872028,0.00022162037,0.00006195317,0.00016747574,0.0000015580979,0.00020403476,0.00048545506,0.00003091793],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004530651,0.000031258904,0.000019065797,0.000032901076,0.00013313477,0.00006873873,0.000069208254,0.0000052431506,0.95131385,0.00549686,0.038872775,0.003911642],"study_design_scores_gemma":[0.00022944192,0.0002145855,0.000004315038,0.00003490519,0.000043060816,0.00009600877,0.00000447818,0.0000037933364,0.28816307,0.0034570294,0.7073578,0.00039150284],"about_ca_topic_score_codex":0.0000430697,"about_ca_topic_score_gemma":0.00027979663,"teacher_disagreement_score":0.66848505,"about_ca_system_score_codex":0.000049851806,"about_ca_system_score_gemma":0.00033204892,"threshold_uncertainty_score":0.99985796},"labels":[],"label_agreement":null},{"id":"W24835840","doi":"10.1007/978-1-59745-457-5_14","title":"Virus-like Particle and Viral Vector Production Using the Baculovirus Expression Vector System/Insect Cell System","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Virus-like particle; Vector (molecular biology); Viral vector; Biology; Gene delivery; Insect; Virus; Virology; Baculoviridae; Computational biology; Gene; Genetic enhancement; Genetics; Recombinant DNA; Botany","score_opus":0.02114312530095877,"score_gpt":0.3459984242816996,"score_spread":0.32485529898074084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W24835840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70539063,0.002728578,0.29025358,0.000018682053,0.0009995562,0.0003838509,0.000009980787,0.000038061804,0.0001770501],"genre_scores_gemma":[0.95193255,0.000043990058,0.047376312,0.00014540667,0.00033632084,0.000056161665,0.0000184522,0.00004198364,0.000048835056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99685705,0.001346345,0.0004554363,0.000716914,0.00011800844,0.0005062325],"domain_scores_gemma":[0.9989371,0.00006391453,0.00019385523,0.0005988504,0.00007768101,0.00012860639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001638761,0.00028680978,0.00029021318,0.00008336001,0.00024422177,0.000036143236,0.00022329058,0.00032361192,0.000006257075],"category_scores_gemma":[0.00017309876,0.00021320311,0.00013450049,0.00021391592,0.00018772812,0.000008299316,0.00024684696,0.0002078077,0.0000034139857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021102911,0.00006310785,0.0017875796,0.000101339974,0.00002622756,0.000017964734,0.00006617673,0.00023460847,0.9962936,0.00029736396,0.000066920424,0.00083410286],"study_design_scores_gemma":[0.00047635823,0.00028368982,0.0008028956,0.000060853054,0.000038013615,0.00008359912,0.0003358217,0.00062707264,0.99533767,0.00004459499,0.0016380488,0.00027140463],"about_ca_topic_score_codex":0.0001796182,"about_ca_topic_score_gemma":0.000030822965,"teacher_disagreement_score":0.24654189,"about_ca_system_score_codex":0.00008257588,"about_ca_system_score_gemma":0.000051871837,"threshold_uncertainty_score":0.8694171},"labels":[],"label_agreement":null},{"id":"W2485974082","doi":"10.1007/978-1-62703-281-0","title":"Array Comparative Genomic Hybridization","year":2013,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Ottawa Hospital","funders":"","keywords":"Comparative genomic hybridization; Computational biology; Biology; Evolutionary biology; Genetics; Genome; Gene","score_opus":0.03231976289024806,"score_gpt":0.34959697861322686,"score_spread":0.3172772157229788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2485974082","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038698888,0.003403643,0.70882976,0.000066895096,0.0005424778,0.0005646697,0.00011992927,0.000022870581,0.2825799],"genre_scores_gemma":[0.0012931795,0.00092601124,0.6322434,0.0010865665,0.00045119232,0.00006361881,0.0029034032,0.00007290552,0.36095974],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978907,0.0005685234,0.00038626543,0.0007164778,0.00007494514,0.0003630863],"domain_scores_gemma":[0.9991046,0.00004432093,0.00022420869,0.00044693312,0.00009395126,0.000085988315],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00047044037,0.0003765055,0.0005457681,0.00016999664,0.000058422527,0.000026679243,0.00039436205,0.0007131756,0.00015778278],"category_scores_gemma":[0.0000807997,0.00037385532,0.0001730806,0.00005616722,0.00017693314,0.0000013187986,0.00019979222,0.00028213486,0.00008498804],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018205621,0.000029402076,0.00018102757,0.000029208339,0.0001163885,0.000007678685,0.00004771072,0.000081031474,0.98168164,0.0015878287,0.014156178,0.0020636676],"study_design_scores_gemma":[0.00054400525,0.0003397543,0.0001496006,0.00005386173,0.00005899845,0.000026965334,0.000041044706,0.00004295418,0.16649391,0.007947444,0.82357544,0.00072604505],"about_ca_topic_score_codex":0.000021692618,"about_ca_topic_score_gemma":0.0000063615234,"teacher_disagreement_score":0.81518775,"about_ca_system_score_codex":0.000042326155,"about_ca_system_score_gemma":0.00019857765,"threshold_uncertainty_score":0.9998713},"labels":[],"label_agreement":null},{"id":"W2486672447","doi":"10.1007/978-1-4939-4014-1_13","title":"Capillary Electrophoresis Method for the Assessment of Erythropoiesis-Stimulating Agents in Final Formulations","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Capillary electrophoresis; Chemistry; Chromatography; Isoelectric focusing; Active ingredient; Erythropoietin; Sialic acid; Isoelectric point; Gene isoform; Glycan; Electrophoresis; Biochemistry; Glycoprotein; Pharmacology; Biology; Enzyme","score_opus":0.03148033966749102,"score_gpt":0.4000294931492759,"score_spread":0.36854915348178485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2486672447","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019691857,0.007041778,0.9721552,0.00031941428,0.00006329043,0.0005114939,0.00001664031,0.000026671807,0.00017365042],"genre_scores_gemma":[0.11495086,0.0065628504,0.87791383,0.0000742905,0.000022753722,0.00040474551,0.000012926948,0.000036610174,0.000021143282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984356,0.00040819403,0.0004811054,0.00024515236,0.00006541081,0.00036453133],"domain_scores_gemma":[0.9982212,0.0012843942,0.00006850002,0.00035142896,0.000046521152,0.000027917213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011642677,0.0001633311,0.0003098345,0.00019318929,0.00005555691,0.0000050288945,0.0002498708,0.0001459202,0.000046972273],"category_scores_gemma":[0.00017790707,0.0001095157,0.00011240113,0.00038874033,0.0000702171,0.000021854437,0.000044877535,0.00012933786,6.6809554e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000077911,0.000020204274,0.0015528905,0.000019843153,0.000050444552,8.5275497e-7,0.000030431032,0.0010669384,0.95216244,0.01659991,0.00029699825,0.028191254],"study_design_scores_gemma":[0.0012776777,0.00020048527,0.013570998,0.000047508318,0.000071424234,0.000009478521,0.00003908227,0.07655397,0.8564568,0.037296228,0.014111153,0.0003651615],"about_ca_topic_score_codex":0.000035982084,"about_ca_topic_score_gemma":0.000015666636,"teacher_disagreement_score":0.095705606,"about_ca_system_score_codex":0.00013739146,"about_ca_system_score_gemma":0.000048889797,"threshold_uncertainty_score":0.44659206},"labels":[],"label_agreement":null},{"id":"W2487677444","doi":"10.1007/978-1-59745-129-1_12","title":"Analysis of Global and Specific Changes in the Disulfide Proteome Using Redox 2D-PAGE","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Redox; Proteome; Chemistry; Cysteine; Polyacrylamide gel electrophoresis; Gel electrophoresis; Biochemistry; Disulfide bond; Molecular mass; Cytoplasm; Sodium dodecyl sulfate; Thiol; Enzyme; Organic chemistry","score_opus":0.03616461324992386,"score_gpt":0.39135369916573903,"score_spread":0.35518908591581516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2487677444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8587925,0.0026248142,0.1379504,0.000108639055,0.00004779189,0.00023337349,0.000033390403,0.0000026491102,0.0002064697],"genre_scores_gemma":[0.8672746,0.00070242025,0.13166983,0.00019826964,0.000033816003,0.000031807424,0.00007262525,0.000007813903,0.000008833367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970652,0.0018423517,0.00029457765,0.00046342792,0.00005625332,0.0002781938],"domain_scores_gemma":[0.99932724,0.00007105192,0.0001298106,0.00040485873,0.000037144648,0.000029881363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010396636,0.00017642404,0.00040343686,0.00015355651,0.000049040114,0.0000040356167,0.00028869184,0.00029578235,0.0000077454515],"category_scores_gemma":[0.00022435184,0.00013061834,0.00010410998,0.0007807852,0.0005850475,0.0000020726338,0.00015249413,0.00013924208,2.0457068e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006786736,0.000039786268,0.17622633,0.000005526745,0.00013325727,0.000028490964,0.00008867587,0.00006162057,0.8215004,0.00039926654,0.0000030317462,0.001445739],"study_design_scores_gemma":[0.0007924924,0.000464653,0.32105723,0.000015934182,0.00014249614,0.000099081495,0.00027512715,0.00029974908,0.67341906,0.0015143871,0.0015637241,0.00035603374],"about_ca_topic_score_codex":0.00008904415,"about_ca_topic_score_gemma":0.00024632504,"teacher_disagreement_score":0.14808132,"about_ca_system_score_codex":0.000016757964,"about_ca_system_score_gemma":0.000029734123,"threshold_uncertainty_score":0.5326461},"labels":[],"label_agreement":null},{"id":"W2487719162","doi":"10.1007/978-1-4939-3302-0_6","title":"Quantitation of Chromosome Damage by Imaging Flow Cytometry","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Effects of Radiation Exposure","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Biodosimetry; Dicentric chromosome; Chromosome; Biology; Nuclear medicine; Medicine; Genetics; Karyotype; Physics; Irradiation; Gene","score_opus":0.023296931621207797,"score_gpt":0.43095610472405005,"score_spread":0.4076591731028423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2487719162","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1660703,0.0022870132,0.83009773,0.00046618772,0.00018562605,0.00019893156,0.0000071390323,0.000026258287,0.00066083303],"genre_scores_gemma":[0.1840717,0.000011171404,0.8153725,0.00040709047,0.000023729677,0.000011677227,0.000057566107,0.000016869866,0.000027643295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825567,0.00096355425,0.00028088744,0.00022169048,0.000102959995,0.0001752387],"domain_scores_gemma":[0.9991696,0.00024855818,0.00010755505,0.00027474042,0.00011520826,0.00008436652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017750042,0.00010604071,0.00032769842,0.0003084395,0.000008690935,0.0000034503591,0.000094899166,0.00012079563,0.000019020525],"category_scores_gemma":[0.0027286655,0.00010016419,0.000056202916,0.00041990602,0.0001044213,0.00003680071,0.000037261438,0.00016332172,0.0000072604935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003722582,0.000056458557,0.037103496,0.000035472636,0.000018272403,0.000028295744,0.00011172691,0.000047876547,0.9458634,0.0006589468,0.00024213722,0.015796643],"study_design_scores_gemma":[0.0029136245,0.000699369,0.0066648023,0.000059490685,0.00005788004,0.000056257046,0.00015224381,0.013905454,0.96883476,0.0041356473,0.0023124688,0.00020800899],"about_ca_topic_score_codex":0.00002862945,"about_ca_topic_score_gemma":8.97114e-7,"teacher_disagreement_score":0.030438693,"about_ca_system_score_codex":0.00006136692,"about_ca_system_score_gemma":0.00006711361,"threshold_uncertainty_score":0.4084577},"labels":[],"label_agreement":null},{"id":"W2489768588","doi":"10.1007/978-1-4939-3637-3_14","title":"Purification of Human and Mammalian Membrane Proteins Expressed in Xenopus laevis Frog Oocytes for Structural Studies","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut Universitaire en Santé Mentale de Québec","funders":"National Science Foundation","keywords":"Xenopus; Complementary DNA; Recombinant DNA; Biology; Protein purification; Membrane protein; Cell biology; Biochemistry; Oocyte; Affinity chromatography; Gene; Membrane; Enzyme; Embryo","score_opus":0.03274916332047209,"score_gpt":0.39605190701652443,"score_spread":0.3633027436960523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2489768588","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9750769,0.0011256987,0.022774227,0.00017678615,0.000120852135,0.00064893556,0.000047761332,0.000006635858,0.000022205686],"genre_scores_gemma":[0.79529595,0.00015660634,0.20408018,0.000052416646,0.00006691548,0.00020469104,0.00004650578,0.000020766016,0.000075955424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835205,0.00045978848,0.00039653407,0.00047691152,0.000047710673,0.00026698428],"domain_scores_gemma":[0.99932826,0.00007260564,0.00014018355,0.0003360473,0.00008519114,0.0000377188],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057241885,0.00019334581,0.00038137205,0.00012927612,0.00003376483,0.0000050520516,0.00018349836,0.00024902885,0.000006015515],"category_scores_gemma":[0.0004432814,0.0001354522,0.00007311468,0.000092670205,0.00026088228,0.0000049319656,0.00009997712,0.00006651403,1.3540665e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106734915,0.000018311692,0.0037435938,0.000082342856,0.000032981374,0.0000017905392,0.00007954456,0.0000012075227,0.98217165,0.0007879769,0.0000033532872,0.012970504],"study_design_scores_gemma":[0.0013564555,0.00038668409,0.001350429,0.00003417912,0.000024077652,0.000005114363,0.00006455812,0.0000021311262,0.99305975,0.0026908217,0.000845267,0.00018050577],"about_ca_topic_score_codex":0.00002951685,"about_ca_topic_score_gemma":0.000053988213,"teacher_disagreement_score":0.18130594,"about_ca_system_score_codex":0.000015999576,"about_ca_system_score_gemma":0.00002624614,"threshold_uncertainty_score":0.55235803},"labels":[],"label_agreement":null},{"id":"W2489930966","doi":"10.1007/978-1-59745-548-0_6","title":"Comparative Molecular Physiological Genomics","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Computational biology; Genomics; Comparative genomics; Biology; Evolutionary biology; Genetics; Genome; Gene","score_opus":0.15922507984075038,"score_gpt":0.5150915050770745,"score_spread":0.35586642523632406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2489930966","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000039801893,0.8315145,0.16552444,0.00002003832,0.00026939396,0.001104541,0.000016010923,0.000046039782,0.0014652879],"genre_scores_gemma":[8.3081824e-7,0.5998177,0.3992887,0.0003154455,0.00010022383,0.0001256491,0.00019370651,0.000045749617,0.000111983754],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99412954,0.0032722286,0.0009293896,0.0009457818,0.000107699096,0.0006153489],"domain_scores_gemma":[0.99830925,0.00027946918,0.00033858992,0.00081132073,0.000070045826,0.00019134597],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005159588,0.0007042058,0.0051053106,0.00040997256,0.00004176833,0.0000057012244,0.00037488434,0.0012280915,0.00007768862],"category_scores_gemma":[0.00034236404,0.00052548246,0.00094788487,0.00053297327,0.0004200552,0.000012363491,0.00025054428,0.0012123137,0.00011279897],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024337669,0.0001972423,0.0000017524263,0.0012767278,0.0006403373,0.0014542849,0.00010103825,0.0000023878495,0.03157136,0.0039531114,0.00016744954,0.96061],"study_design_scores_gemma":[0.00045796868,0.00024981433,0.0000054530396,0.0007728456,0.000715401,0.00085535995,0.0000075669986,0.000006664167,0.0019647465,0.001164131,0.99333,0.00047003984],"about_ca_topic_score_codex":0.0000123960235,"about_ca_topic_score_gemma":4.080362e-7,"teacher_disagreement_score":0.9931626,"about_ca_system_score_codex":0.00014348794,"about_ca_system_score_gemma":0.0003993616,"threshold_uncertainty_score":0.9997197},"labels":[],"label_agreement":null},{"id":"W2490382806","doi":"10.1007/978-1-61779-977-8","title":"Forensic Microscopy for Skeletal Tissues","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Forensic Anthropology and Bioarchaeology Studies","field":"Arts and Humanities","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Microscopy; Pathology; Medicine","score_opus":0.044636565414177515,"score_gpt":0.4042700782024124,"score_spread":0.35963351278823485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2490382806","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009506036,0.07310545,0.39215356,0.005243697,0.01505738,0.0022085735,0.00068073993,0.00022181259,0.51123375],"genre_scores_gemma":[0.00006113772,0.0002663466,0.49547586,0.0011662206,0.0014566829,0.00018872328,0.0005616056,0.0000871378,0.5007363],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99775153,0.0004769059,0.00046814952,0.00054119114,0.000049106773,0.00071310415],"domain_scores_gemma":[0.9987098,0.0005651117,0.00021918342,0.00033677663,0.00011966519,0.00004945648],"candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008592081,0.00046789367,0.0009802855,0.00024900906,0.00023097299,0.000010858461,0.00030333945,0.0008097617,0.00093637675],"category_scores_gemma":[0.0001691507,0.00038778133,0.000313547,0.000017614038,0.020917416,0.000026123673,0.00025325952,0.0005092584,0.00006310189],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004263874,0.000032350606,0.000053100826,0.00008868415,0.0002864823,0.000013205544,0.002158014,6.597009e-8,0.00032911164,0.960316,0.016748542,0.019931803],"study_design_scores_gemma":[0.0002928955,0.0003382114,0.0000013383354,0.000033632128,0.00012384489,0.000011956895,0.0005327106,0.0000018167447,0.0019372224,0.2441581,0.75221187,0.00035637934],"about_ca_topic_score_codex":0.00023396681,"about_ca_topic_score_gemma":0.002373402,"teacher_disagreement_score":0.7354634,"about_ca_system_score_codex":0.000073966956,"about_ca_system_score_gemma":0.00009538486,"threshold_uncertainty_score":0.9999769},"labels":[],"label_agreement":null},{"id":"W2490407052","doi":"10.1007/978-1-4939-4023-3_14","title":"Measuring Equilibrium Binding Constants for the WT1-DNA Interaction Using a Filter Binding Assay","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Zinc finger; Binding domain; Nucleic acid; DNA; Binding site; RNA; DNA-binding domain; DNA binding site; Binding constant; Equilibrium constant; Biology; LIM domain; Biophysics; Chemistry; Molecular biology; Genetics; Transcription factor; Promoter; Gene; Gene expression","score_opus":0.06750895039338425,"score_gpt":0.391788538779868,"score_spread":0.32427958838648374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2490407052","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31675223,0.00061636977,0.68114096,0.00020991042,0.0007538728,0.00025885546,0.000016704018,0.000010296542,0.00024080092],"genre_scores_gemma":[0.7511606,0.00029448073,0.24714465,0.00036764806,0.00031805373,0.00013768816,0.000033950444,0.000078254554,0.00046462353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801034,0.00071315165,0.00031574635,0.00046314904,0.000064856984,0.00043278383],"domain_scores_gemma":[0.9991255,0.0003045507,0.00015203444,0.00030513798,0.000061982224,0.000050816958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015237333,0.00020029492,0.00022023315,0.00013186666,0.000091525406,0.000020566173,0.00025497854,0.00031215683,0.000015753625],"category_scores_gemma":[0.0006822712,0.000117404576,0.00017115995,0.00015943176,0.00017428982,0.0000065162276,0.00014924744,0.00014469444,0.0000034127356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001279473,0.000010724523,0.00061583,0.000011302788,0.00013027119,0.000004004307,0.00001805743,0.00011396947,0.97850853,0.0001102396,0.000034748366,0.020314395],"study_design_scores_gemma":[0.0007104258,0.00012371133,0.000017040804,0.000091681984,0.000038564223,0.00004798347,0.000051517396,0.00064126257,0.9902012,0.0003777717,0.007488242,0.00021062963],"about_ca_topic_score_codex":0.000016293674,"about_ca_topic_score_gemma":0.000006471761,"teacher_disagreement_score":0.43440843,"about_ca_system_score_codex":0.0000871813,"about_ca_system_score_gemma":0.00007384999,"threshold_uncertainty_score":0.47876197},"labels":[],"label_agreement":null},{"id":"W2491153247","doi":"10.1007/978-1-4939-4014-1_11","title":"Separation of Recombinant Therapeutic Proteins Using Capillary Gel Electrophoresis and Capillary Isoelectric Focusing","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein purification and stability","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Isoelectric focusing; Capillary electrophoresis; Chromatography; Isoelectric point; Free-flow electrophoresis; Chemistry; Capillary action; Electrophoresis; Capillary electrochromatography; Peptide; Gel electrophoresis of proteins; Polyacrylamide gel electrophoresis; Materials science; Biochemistry; Enzyme","score_opus":0.023017702701757504,"score_gpt":0.380114681674928,"score_spread":0.3570969789731705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2491153247","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45431843,0.007981925,0.53711027,0.00015157953,0.00005701001,0.00032787365,0.0000019820068,0.00000614477,0.000044814904],"genre_scores_gemma":[0.75893235,0.0013009794,0.23945937,0.00015324606,0.000027036089,0.00005235621,0.000011696937,0.000024518073,0.00003845615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99739873,0.0013370129,0.0003928055,0.0004969152,0.00006550789,0.00030900814],"domain_scores_gemma":[0.9991716,0.00005864773,0.00017126785,0.000425095,0.00012263922,0.00005074593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010809648,0.0001831422,0.00028317666,0.00014901604,0.00005344336,0.00000679698,0.00015441881,0.00029163717,0.000009063073],"category_scores_gemma":[0.00044653923,0.00013960319,0.00007828867,0.00022407006,0.00020016081,0.000004859566,0.000084499465,0.00009278375,4.7301245e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009638614,0.000049447004,0.003441605,0.000018511826,0.000034334385,0.0000016838904,0.000020148313,0.000002037658,0.9516433,0.0008765283,0.0000018678804,0.04381416],"study_design_scores_gemma":[0.0005025083,0.000397987,0.0015162553,0.00001546892,0.000017323937,0.000025397714,0.000009474419,0.0001585279,0.9890639,0.006578497,0.0015210198,0.00019361898],"about_ca_topic_score_codex":0.000056135028,"about_ca_topic_score_gemma":0.000013777971,"teacher_disagreement_score":0.30461392,"about_ca_system_score_codex":0.00004641805,"about_ca_system_score_gemma":0.0001207242,"threshold_uncertainty_score":0.5692853},"labels":[],"label_agreement":null},{"id":"W2491612826","doi":"10.1007/978-1-61779-539-8","title":"Host-Fungus Interactions","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie – Hans-Knöll-Institut; Center for Sepsis Control and Care; Directorate for Biological Sciences; Universidade de São Paulo; Yonsei University; Leibniz-Gemeinschaft; University of Manchester; Radboud Universiteit; University of Aberdeen; Universidade Federal de Goiás; King's College London; Imperial College London; National University of Ireland; McGill University; Universidade do Minho; Institut National de la Recherche Agronomique; Carnegie Mellon University; Universitätsklinikum Jena; University of Cincinnati; Massachusetts General Hospital","keywords":"Fungus; Host (biology); Biology; Botany; Ecology","score_opus":0.02203792044943098,"score_gpt":0.3694664224952506,"score_spread":0.3474285020458196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2491612826","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00068307744,0.035273053,0.56089485,0.000084631654,0.002554855,0.0007907972,0.0021776482,0.000058259757,0.39748284],"genre_scores_gemma":[0.00058904476,0.0016633595,0.53328866,0.0018755597,0.0016349452,0.00026002133,0.007989553,0.00026173156,0.45243716],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99743336,0.00076499523,0.00044128945,0.00072072295,0.00008173209,0.0005578991],"domain_scores_gemma":[0.9987284,0.000091509646,0.0002058068,0.0007310736,0.000072021954,0.00017117025],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005705766,0.0004635171,0.00052352954,0.00024137076,0.000048299993,0.000015736596,0.000414487,0.0008638208,0.00018321628],"category_scores_gemma":[0.0003397852,0.00046073974,0.0003505572,0.000082707855,0.00016333417,0.0000024839999,0.0003485729,0.00047808542,0.00006331321],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054844586,0.000075217264,0.00041124132,0.000033868866,0.00014432616,0.000043610944,0.000009146143,0.000003363253,0.9861282,0.0023614613,0.004562036,0.006172656],"study_design_scores_gemma":[0.0003069109,0.00018779667,0.00036011744,0.000057472964,0.00012867259,0.00009862014,0.0000068352724,0.0000089147725,0.04830079,0.002419745,0.9474501,0.0006740235],"about_ca_topic_score_codex":0.000008660465,"about_ca_topic_score_gemma":0.000023364651,"teacher_disagreement_score":0.9428881,"about_ca_system_score_codex":0.00006688462,"about_ca_system_score_gemma":0.00024520594,"threshold_uncertainty_score":0.9997844},"labels":[],"label_agreement":null},{"id":"W2491773350","doi":"10.1007/978-1-61779-445-2","title":"Amino Acid Analysis","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Aristotle University of Thessaloniki; Universität Regensburg; Medizinischen Hochschule Hannover; Akademie Věd České Republiky; College of Engineering, Michigan State University; Università di Pisa; KU Leuven; Università degli Studi di Padova; Universität Leipzig; University of Queensland; Cardiff Metropolitan University; Universität für Bodenkultur Wien; Eidgenössische Technische Hochschule Zürich; Michigan State University; University of New England; Keio University; National Institute of Standards and Technology; McMaster University; National Institute of Advanced Industrial Science and Technology; Commonwealth Scientific and Industrial Research Organisation; South Dakota State University; Virginia Polytechnic Institute and State University; California Institute of Technology","keywords":"Amino acid analysis; Amino acid; Variety (cybernetics); Computational biology; Chemistry; Biochemistry; Computer science; Biology; Artificial intelligence","score_opus":0.018716733041799678,"score_gpt":0.35430892385237667,"score_spread":0.335592190810577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2491773350","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000315224,0.01907047,0.72000587,0.000020932657,0.0004592734,0.00031671798,0.000067489425,0.000016985354,0.25972706],"genre_scores_gemma":[0.00023410615,0.0020939542,0.71114606,0.0011082109,0.0002635394,0.00012352754,0.0024222787,0.00013850516,0.2824698],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99626493,0.0011387537,0.0006460038,0.0012458923,0.00011575368,0.0005886419],"domain_scores_gemma":[0.99805355,0.00003212793,0.0002950367,0.001392506,0.00009295362,0.00013383866],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011445635,0.00058262976,0.0010253341,0.00064920407,0.000037355876,0.000014788027,0.0008057576,0.0015088203,0.00039173753],"category_scores_gemma":[0.00026365978,0.0005814724,0.0006948925,0.0003572934,0.0003357315,0.000001142299,0.00043146877,0.00040357333,0.000037748097],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013863432,0.00016254005,0.0018810764,0.0000838548,0.0038903253,0.00005837849,0.00010690127,0.00005954736,0.89026845,0.013295232,0.0050521772,0.08500291],"study_design_scores_gemma":[0.0006053529,0.00025571545,0.00045848495,0.000014224134,0.0011763652,0.000009423383,0.000012747784,0.000016061544,0.1691113,0.026624843,0.80073065,0.0009848715],"about_ca_topic_score_codex":0.00003268681,"about_ca_topic_score_gemma":0.00009143666,"teacher_disagreement_score":0.79567844,"about_ca_system_score_codex":0.00001388081,"about_ca_system_score_gemma":0.00027562806,"threshold_uncertainty_score":0.99978745},"labels":[],"label_agreement":null},{"id":"W2491999693","doi":"10.1007/978-1-61779-089-8","title":"High-Throughput Next Generation Sequencing","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agriculture and Agri-Food Canada; College of Veterinary Medicine, University of Georgia; Public Health Agency of Canada; University of California, Los Angeles; Biodesign Institute, Arizona State University; Public Health Agency; Technische Universität Bergakademie Freiberg; Institute of Genetics; Arizona State University","keywords":"Throughput; DNA sequencing; Computer science; Computational biology; Biology; Genetics; Telecommunications; DNA","score_opus":0.06973405407109323,"score_gpt":0.3570600971071708,"score_spread":0.28732604303607756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2491999693","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018789977,0.011536338,0.9333091,0.000056249868,0.0020425813,0.0005510185,0.00011001458,0.000023629475,0.05049208],"genre_scores_gemma":[0.00044306566,0.0035352698,0.9414453,0.001902474,0.0016611413,0.00012773917,0.0027599202,0.00018232883,0.047942776],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99726367,0.0005395732,0.0005936466,0.0010380005,0.000081617945,0.00048349038],"domain_scores_gemma":[0.9984997,0.00006416941,0.00029173796,0.000928505,0.00011664174,0.00009926944],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00081477873,0.0004908297,0.0006000023,0.00019149338,0.00005462685,0.000031647385,0.00045594855,0.0013769626,0.00009559406],"category_scores_gemma":[0.00039989103,0.00053411233,0.00023303408,0.000081668884,0.0002036117,0.000002581691,0.00040097418,0.000431301,0.000024299923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027376922,0.000020964337,0.000018303912,0.000027031685,0.00010512501,0.000037901013,0.000034209927,0.00013738501,0.9623973,0.016276384,0.004081356,0.016836694],"study_design_scores_gemma":[0.00060197647,0.0005180773,0.000005734897,0.000042361156,0.000090369096,0.00003730376,0.000009106947,0.00012486266,0.55356354,0.03569039,0.4084563,0.0008599754],"about_ca_topic_score_codex":0.00020370072,"about_ca_topic_score_gemma":0.00020386248,"teacher_disagreement_score":0.4088337,"about_ca_system_score_codex":0.00025655102,"about_ca_system_score_gemma":0.0008218247,"threshold_uncertainty_score":0.9999195},"labels":[],"label_agreement":null},{"id":"W2492948267","doi":"10.1007/978-1-59745-548-0_2","title":"Fluorescent RNA Arbitrarily Primed Polymerase Chain Reaction","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Genomics; University of Ottawa; Carleton University","funders":"","keywords":"Complementary DNA; RNA; Polymerase chain reaction; Molecular biology; Biology; Differential display; Fluorescence; Computational biology; Gene; Genetics; Physics","score_opus":0.019203502066084455,"score_gpt":0.3690317560691184,"score_spread":0.34982825400303397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2492948267","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22734,0.0013728915,0.76815945,0.00038320033,0.00014805807,0.00046568832,0.000013017885,0.00005836659,0.0020593507],"genre_scores_gemma":[0.26126456,0.0007343602,0.7348322,0.001951295,0.00014871065,0.00034604,0.00038752527,0.00006112851,0.0002741413],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973535,0.0008395663,0.0004451849,0.000786034,0.00008013989,0.00049555546],"domain_scores_gemma":[0.99883515,0.000030869298,0.00014835555,0.0007982301,0.00006556145,0.00012183957],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00066602294,0.0002995518,0.00032439467,0.00017784088,0.000120349105,0.00000642153,0.0003758866,0.00057233876,0.000017663591],"category_scores_gemma":[0.00023078769,0.00029649868,0.00018816143,0.00028460895,0.0003353241,0.0000028071806,0.00019542998,0.00031465333,0.000009203403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000652512,0.00012420738,0.0010655394,0.000004855666,0.000038263253,0.000030429992,0.000018364282,0.000004825813,0.9860736,0.0032644626,0.00020980556,0.009100378],"study_design_scores_gemma":[0.00052231364,0.00026001787,0.0009740438,0.0000067314436,0.0000128147785,0.00014224907,0.000009636425,0.000059597773,0.9688442,0.0014058611,0.027435584,0.00032694792],"about_ca_topic_score_codex":0.000098465185,"about_ca_topic_score_gemma":0.000012213003,"teacher_disagreement_score":0.033924572,"about_ca_system_score_codex":0.000037108333,"about_ca_system_score_gemma":0.0001104674,"threshold_uncertainty_score":0.99994874},"labels":[],"label_agreement":null},{"id":"W249486536","doi":"10.1007/978-1-60327-355-8_1","title":"Helicases: An Overview","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children; SickKids Foundation","funders":"","keywords":"Helicase; Nucleic acid; Ribosome biogenesis; Nucleic acid structure; Biogenesis; Nucleic acid metabolism; Biochemistry; DNA; Biology; RNA Helicase A; Nucleoside triphosphate; RNA; Chemistry; Ribosome; Nucleotide; Gene","score_opus":0.0949898892592396,"score_gpt":0.4942048948100808,"score_spread":0.3992150055508412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W249486536","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00000519223,0.843722,0.15462457,0.000009089116,0.00029634588,0.0007298866,0.00003612012,0.00004041972,0.0005364006],"genre_scores_gemma":[1.294121e-7,0.6157749,0.38274136,0.00038805706,0.000134734,0.00015279619,0.0006050548,0.000082794715,0.000120123994],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9914593,0.0052671656,0.0009387476,0.001520218,0.00010967115,0.0007048883],"domain_scores_gemma":[0.99750423,0.00007662153,0.00036964685,0.0018006605,0.000059652903,0.00018919646],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019863183,0.00079162396,0.002030545,0.00032852637,0.00004271837,0.000028409768,0.001056374,0.0017192952,0.00005061375],"category_scores_gemma":[0.0005438753,0.0007136879,0.0008098632,0.0004301336,0.00012385476,0.0000030538397,0.00040656078,0.00052679016,0.00003162745],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007701828,0.0001056048,6.1715923e-7,0.00095457677,0.000094951356,0.00006754389,0.0000040760433,0.0000010595518,0.03417885,0.0025947054,0.0000404868,0.9619498],"study_design_scores_gemma":[0.00020969298,0.000757077,2.8832002e-7,0.00091267866,0.0002157911,0.00021887229,0.0000041426406,0.0000050290087,0.008801971,0.0033217538,0.98480654,0.00074617704],"about_ca_topic_score_codex":0.000014272539,"about_ca_topic_score_gemma":0.0000130312,"teacher_disagreement_score":0.98476607,"about_ca_system_score_codex":0.00006630918,"about_ca_system_score_gemma":0.00029441918,"threshold_uncertainty_score":0.9995767},"labels":[],"label_agreement":null},{"id":"W2495469327","doi":"10.1007/978-1-61779-433-9","title":"Recombinant Gene Expression","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Molecular and Cell Biology; RIKEN; Natural Environment Research Council; Huazhong Agricultural University; Tartu Ülikool; Central Food Technological Research Institute, Council of Scientific and Industrial Research; Austrian Centre of Industrial Biotechnology; Universidad Nacional Autónoma de México; Universidad Autónoma de Nuevo León; Universidad de Sevilla; Instituto Mexicano del Seguro Social; Energy Biosciences Institute; Università degli Studi di Milano-Bicocca; Teknologian Tutkimuskeskus VTT; Arkansas Biosciences Institute; Rijksuniversiteit Groningen; Arkansas State University; Advanced Science Institute; Magyar Tudományos Akadémia; Agriculture and Agri-Food Canada; Università degli Studi di Napoli Federico II","keywords":"Recombinant DNA; Escherichia coli; Gene; Gene expression; Biology; Computational biology; Cell biology; Genetics","score_opus":0.023068465870792,"score_gpt":0.36153640763812817,"score_spread":0.3384679417673362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2495469327","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012968215,0.017628226,0.695656,0.000034719873,0.0038088944,0.0009730122,0.00009345962,0.000075961776,0.2804329],"genre_scores_gemma":[0.00036986178,0.00248721,0.65240294,0.0012089931,0.0007060864,0.00036247252,0.0016102851,0.0002887098,0.34056342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99642634,0.0010763907,0.00062227354,0.001200001,0.00010646476,0.00056853704],"domain_scores_gemma":[0.9981797,0.000042083713,0.000339859,0.0011635043,0.000100776786,0.00017408331],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007165307,0.00058807986,0.0006443128,0.00025618967,0.00007958443,0.00001784953,0.00059925794,0.0016112138,0.00027760898],"category_scores_gemma":[0.00026894786,0.00054319395,0.0004263726,0.000090737165,0.0002186762,0.0000024182236,0.00064421,0.00051593076,0.00004088459],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011122047,0.00010634407,0.00014170787,0.000043826494,0.00007507347,0.00004780887,0.00001732168,0.000010792237,0.9751121,0.0011072095,0.016091837,0.007134784],"study_design_scores_gemma":[0.00047628806,0.00052224717,0.000016951528,0.00009241486,0.000033565317,0.000030866988,0.0000026908076,0.0000030367803,0.64365995,0.03338332,0.32121095,0.00056771917],"about_ca_topic_score_codex":0.000023775898,"about_ca_topic_score_gemma":0.000009675506,"teacher_disagreement_score":0.33145213,"about_ca_system_score_codex":0.00006832615,"about_ca_system_score_gemma":0.00032231785,"threshold_uncertainty_score":0.999702},"labels":[],"label_agreement":null},{"id":"W2496305353","doi":"10.1007/978-1-59745-177-2_17","title":"Identifying Putative Drug Targets and Potential Drug Leads","year":2008,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"DrugBank; PubChem; Cheminformatics; Drug; Computational biology; Drug discovery; Drug development; Biology; Bioinformatics; Pharmacology","score_opus":0.02882703119485454,"score_gpt":0.37289464701730046,"score_spread":0.34406761582244594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2496305353","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00014703597,0.0070353085,0.9720606,0.00042783876,0.0011400393,0.00037904255,0.000019178333,0.0000956904,0.018695235],"genre_scores_gemma":[0.000378585,0.00054177805,0.9845795,0.0005024057,0.00009610285,0.000027194603,0.000049444545,0.00006506396,0.013759947],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9946798,0.0022784953,0.0007419675,0.001468892,0.0003079502,0.0005228581],"domain_scores_gemma":[0.9975743,0.0010453005,0.0004036918,0.0006887115,0.00014957543,0.00013841999],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002398158,0.00059784343,0.0009043806,0.0007712277,0.00013854662,0.00009971751,0.0011285086,0.00039544347,0.000025144198],"category_scores_gemma":[0.00028771386,0.0006303936,0.00027387706,0.0001788942,0.00047684787,0.00019025632,0.0015054905,0.0009198991,0.00002309932],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003403253,0.00005566554,0.000033984084,0.00010451533,0.00027421385,0.0016174708,0.002638441,0.0043400815,0.018859977,0.7022216,0.0005181797,0.26930186],"study_design_scores_gemma":[0.0006216716,0.000066899185,0.00013058781,0.000102034704,0.00004587036,0.000352307,0.000017592283,0.020030841,0.009807542,0.9506513,0.017088097,0.0010852619],"about_ca_topic_score_codex":0.000034359782,"about_ca_topic_score_gemma":0.0000056645586,"teacher_disagreement_score":0.2682166,"about_ca_system_score_codex":0.0001376825,"about_ca_system_score_gemma":0.00021901247,"threshold_uncertainty_score":0.9996147},"labels":[],"label_agreement":null},{"id":"W2496936831","doi":"10.1007/978-1-62703-260-5_19","title":"mRNA PCR-Based Epitope Chase Method","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal; Hôpital Notre-Dame","funders":"Canadian Institutes of Health Research","keywords":"Epitope; Messenger RNA; Molecular biology; Biology; Linear epitope; Complementary DNA; Antigen; Computational biology; Virology; Gene; Genetics","score_opus":0.06999080182726518,"score_gpt":0.45365818601333513,"score_spread":0.38366738418606994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2496936831","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000010808914,0.6205753,0.37660655,0.000030307607,0.0017113724,0.0006807249,0.000054790144,0.00006882481,0.00027100852],"genre_scores_gemma":[5.267208e-7,0.67891496,0.31892377,0.00029698122,0.000049431786,0.00036333088,0.00042192853,0.00011608323,0.000912956],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9690736,0.027102895,0.0014666991,0.0009914257,0.000039475974,0.0013258854],"domain_scores_gemma":[0.9946714,0.003035911,0.0007163164,0.001460889,0.000065209344,0.000050279865],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.005979656,0.0010593715,0.0038016574,0.001085186,0.00015149299,0.00001957717,0.001184648,0.0029094687,0.0015197506],"category_scores_gemma":[0.0007688326,0.00085423514,0.001267179,0.00075404474,0.0004990617,0.00004630891,0.0002900889,0.0019223356,0.00063105905],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011702173,0.00020628412,0.0000029981818,0.0011978399,0.00058146747,0.00002633696,0.000041897027,7.6484883e-7,0.08173899,0.001190559,0.00003373707,0.9148621],"study_design_scores_gemma":[0.0009990778,0.00025769148,0.0000014115544,0.0010912599,0.0005989856,0.00024412134,0.0000091752445,0.0000012484525,0.030123675,0.0003305819,0.96549565,0.0008471287],"about_ca_topic_score_codex":0.00009509223,"about_ca_topic_score_gemma":0.0000025795305,"teacher_disagreement_score":0.9654619,"about_ca_system_score_codex":0.00018010942,"about_ca_system_score_gemma":0.0004797509,"threshold_uncertainty_score":0.999393},"labels":[],"label_agreement":null},{"id":"W2496984298","doi":"10.1007/978-1-61779-154-3","title":"Plant Transcription Factors","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Life and Environmental Sciences, Deakin University; Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional; Wageningen University and Research; Agriculture and Agri-Food Canada; Vlaamse regering; Natural Resources Canada; Centre Léon Bérard; Vlaamse Instelling voor Technologisch Onderzoek; Institut National de la Recherche Agronomique; Universidad Nacional del Litoral; Universiteit Gent; Gyeongsang National University; Universiteit Utrecht; Consejo Nacional de Investigaciones Científicas y Técnicas; University of Adelaide; Huck Institutes of the Life Sciences; Auburn University; Institut National de la Santé et de la Recherche Médicale; Universiteit Antwerpen; Ohio State University; Friedrich-Schiller-Universität Jena; AgroParisTech; National Institute of Advanced Industrial Science and Technology","keywords":"Transcription factor; Computational biology; Biology; Transcription (linguistics); Genetics; Gene","score_opus":0.08444074906539592,"score_gpt":0.35744884938055405,"score_spread":0.2730081003151581,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2496984298","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09237339,0.016939675,0.093009196,0.0009829137,0.0040856763,0.005413501,0.005444682,0.0008293664,0.7809216],"genre_scores_gemma":[0.006730775,0.0034793222,0.41246393,0.0032757467,0.0013847051,0.00064533285,0.04901487,0.00008794598,0.5229174],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956518,0.0020473134,0.0005038333,0.00092032447,0.00014440417,0.00073233387],"domain_scores_gemma":[0.9989244,0.00051223784,0.00017945936,0.00018875608,0.00005306643,0.00014213152],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012932927,0.00049592485,0.00077151315,0.00012405372,0.0000733745,0.000018499868,0.0008574488,0.0017010962,0.00075311266],"category_scores_gemma":[0.00019955837,0.00020603552,0.0003263068,0.00020532658,0.0002949377,0.000022490613,0.00018914929,0.0010223512,0.00005799255],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045092213,0.000045013294,0.0006551528,0.000012572538,0.000060602637,0.00011767926,0.000036323436,2.06172e-7,0.9708962,0.005105264,0.00046488637,0.022561023],"study_design_scores_gemma":[0.00038567898,0.0012324457,0.0032873102,0.00013184902,0.00008562042,0.00010806737,0.000035297766,0.000017676362,0.17926891,0.09321182,0.7207529,0.0014824057],"about_ca_topic_score_codex":0.00017264578,"about_ca_topic_score_gemma":0.0003871753,"teacher_disagreement_score":0.7916273,"about_ca_system_score_codex":0.000114358394,"about_ca_system_score_gemma":0.00006761827,"threshold_uncertainty_score":0.9995949},"labels":[],"label_agreement":null},{"id":"W2497195323","doi":"10.1007/978-1-59745-542-8","title":"Protein Blotting and Detection","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Oklahoma Health Sciences Center; Universitat Autònoma de Barcelona; Otsuka Pharmaceutical; National Taiwan University; Ben-Gurion University of the Negev; Université de Toulouse; University of Crete; Oklahoma Medical Research Foundation; York University; National Cancer Institute; Brigham and Women's Hospital; Università Degli Studi di Modena e Reggio Emila; Hebrew University of Jerusalem; Thomas Jefferson University; School of Medicine, New York University; Technische Universität Dresden; Agence Française de Lutte contre le Dopage; University of Oklahoma; Office of International Science and Engineering; University of Wisconsin-Madison; University of Connecticut; U.S. Department of Veterans Affairs","keywords":"Blot; Biology; Biochemistry; Gene","score_opus":0.02048380290920573,"score_gpt":0.37175769549391235,"score_spread":0.35127389258470665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2497195323","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0037694096,0.007024203,0.8980919,0.0002352017,0.00028509792,0.0014100613,0.00002514438,0.000037555797,0.08912144],"genre_scores_gemma":[0.0010332563,0.0016262033,0.8743978,0.0009886101,0.0006087556,0.00011575248,0.00047759482,0.00010697294,0.120645046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974122,0.00062531396,0.00056948594,0.0006689815,0.00016850613,0.0005555047],"domain_scores_gemma":[0.9989816,0.00005266942,0.00019778358,0.0004992487,0.00010326349,0.00016541418],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017726534,0.00038113492,0.00047032096,0.00028828796,0.00006117574,0.000031233234,0.00034632016,0.0014176934,0.000013113],"category_scores_gemma":[0.0010701503,0.00035737536,0.00014085611,0.00009843901,0.00040602777,0.0000017865334,0.00036251917,0.00060706295,0.000008374909],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003276953,0.000019643376,0.000010905131,0.00008327662,0.000039569157,0.000010477558,0.000015070439,0.0000011029467,0.7167638,0.00024050009,0.00019976289,0.28258312],"study_design_scores_gemma":[0.00074676157,0.0015066521,0.00005932883,0.00012461985,0.000034067318,0.000049351078,0.000019454086,0.00021938793,0.60049087,0.023146136,0.37293315,0.0006702205],"about_ca_topic_score_codex":0.0000107625365,"about_ca_topic_score_gemma":0.000030411013,"teacher_disagreement_score":0.37273338,"about_ca_system_score_codex":0.000057113062,"about_ca_system_score_gemma":0.0002468524,"threshold_uncertainty_score":0.9998878},"labels":[],"label_agreement":null},{"id":"W2497757450","doi":"10.1007/978-1-60327-414-2","title":"Chromatin Immunoprecipitation Assays","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Materials Research and Engineering; Russian Academy of Sciences; Debreceni Egyetem; Vanderbilt University; Institut Gustave-Roussy; Technion-Israel Institute of Technology; Directorate for Biological Sciences; Centre National de la Recherche Scientifique; University of Ottawa; Karolinska Institutet; University of Washington; Universitetet i Oslo; Mississippi State University","keywords":"Immunoprecipitation; Chromatin immunoprecipitation; Chemistry; Molecular biology; Biology; Biochemistry; Gene","score_opus":0.030060541261626886,"score_gpt":0.42049963356089604,"score_spread":0.39043909229926915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2497757450","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009585615,0.002025761,0.54140306,0.00028745685,0.00039971902,0.00043482237,0.000012407647,0.000064894506,0.45527604],"genre_scores_gemma":[0.000052354477,0.00012893925,0.8727488,0.0011234666,0.0002386626,0.000046458757,0.0007045067,0.00006104524,0.12489579],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99800605,0.0006145757,0.0005637158,0.00044832102,0.000100928046,0.00026639557],"domain_scores_gemma":[0.99882716,0.00029314662,0.00022994264,0.000477851,0.000110846326,0.00006105027],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00092604203,0.0002951287,0.0007273778,0.00047115586,0.00003132903,0.000011189428,0.0001352282,0.00069106155,0.0004100351],"category_scores_gemma":[0.000674993,0.00027681433,0.0002771695,0.00012876467,0.000082225066,0.000016770777,0.000047911155,0.0008560163,0.000058237925],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044696284,0.000074532014,0.000011387473,0.000048386646,0.00010184338,0.00009421033,0.000069023314,0.0000091375,0.9070744,0.008742858,0.0037456458,0.07998391],"study_design_scores_gemma":[0.0014695615,0.001709328,0.00031207068,0.0009241896,0.0003098787,0.0003123063,0.000018275246,0.00036010647,0.20656769,0.09921738,0.6881579,0.0006412936],"about_ca_topic_score_codex":0.000019201889,"about_ca_topic_score_gemma":0.0000034905322,"teacher_disagreement_score":0.7005067,"about_ca_system_score_codex":0.00029688404,"about_ca_system_score_gemma":0.00030931513,"threshold_uncertainty_score":0.9999684},"labels":[],"label_agreement":null},{"id":"W2498066637","doi":"10.1007/978-1-59745-548-0_5","title":"Constructing and Screening a cDNA Library","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Open reading frame; ENCODE; cDNA library; Complementary DNA; Gene; Computational biology; Frame (networking); Biology; Reading (process); Key (lock); Computer science; Genetics; Political science; Ecology","score_opus":0.014717605436497907,"score_gpt":0.31202494420152294,"score_spread":0.297307338765025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2498066637","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4372562,0.0019904748,0.5599488,0.000109284396,0.00015435288,0.00007474043,0.0000036352667,0.000020895623,0.00044166055],"genre_scores_gemma":[0.1493214,0.00031867344,0.84980386,0.00018374088,0.0001468148,0.000008704227,0.000040028637,0.000020093334,0.0001566605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892473,0.00028841026,0.00018139125,0.0003700829,0.00002426131,0.00021111092],"domain_scores_gemma":[0.9996858,0.0000082107235,0.000044081247,0.0002030836,0.00001346402,0.00004531835],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003074355,0.00012998779,0.00017317949,0.000092115195,0.00004346068,0.0000063162147,0.00009390017,0.00017747462,0.00000841914],"category_scores_gemma":[0.00021695727,0.00012690638,0.000042914075,0.00013744038,0.00016566856,0.000003250373,0.00012898378,0.00012911868,6.729762e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001603908,0.000008149369,0.010451324,0.000007056524,0.000016429436,0.000008272866,0.000017968114,0.0000163466,0.9565278,0.0006485533,0.000034791643,0.03224722],"study_design_scores_gemma":[0.00033253047,0.00007997825,0.0012189758,0.000009428654,0.0000061633928,0.0004310064,0.000035297147,0.00007796803,0.98015904,0.00025218283,0.017205972,0.00019143049],"about_ca_topic_score_codex":0.000011741024,"about_ca_topic_score_gemma":0.0000012419168,"teacher_disagreement_score":0.2898551,"about_ca_system_score_codex":0.0000030818212,"about_ca_system_score_gemma":0.00001975348,"threshold_uncertainty_score":0.51750916},"labels":[],"label_agreement":null},{"id":"W2500597217","doi":"10.1007/978-1-4939-3539-0_8","title":"A Functional Assay for GPR55: Envision Protocol","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute on Drug Abuse; National Institutes of Health; University of Aberdeen; GW Pharmaceuticals","keywords":"Phosphorylation; Chemistry; Enzyme; Antibody; Cell biology; Computational biology; Molecular biology; Biochemistry; Biology; Immunology","score_opus":0.028493244012810292,"score_gpt":0.39681874171323867,"score_spread":0.3683254977004284,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2500597217","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001884855,0.000054610173,0.9881355,0.00026127754,0.00022846635,0.009161744,0.000013019388,0.000012277413,0.00024823198],"genre_scores_gemma":[0.003672207,0.000008108715,0.95708,0.0005286546,0.0002259115,0.037705123,0.00004856673,0.000041287527,0.000690122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980973,0.00068879663,0.00029396237,0.0005279681,0.00006113538,0.00033081765],"domain_scores_gemma":[0.9993498,0.0001244545,0.00009149397,0.00030026413,0.00007387432,0.000060143862],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001729282,0.00017657338,0.00020348247,0.000086951775,0.000048672995,0.0000086871305,0.00017618062,0.00032816516,0.00019733193],"category_scores_gemma":[0.0007005203,0.00012103422,0.0001547082,0.00007611469,0.00007098606,0.0000023955447,0.00010701641,0.000065617074,0.0000067092114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017781182,0.000035283138,0.00018622189,0.000009068317,0.000021596463,0.0000012145653,0.0000035112128,0.000009915386,0.9183803,0.0042453175,0.00021118013,0.07671856],"study_design_scores_gemma":[0.0012348803,0.0004479438,0.000046684367,0.000014512465,0.0000048223337,0.000006983555,0.0000050707436,0.00004835619,0.85689753,0.013885787,0.12723294,0.00017449449],"about_ca_topic_score_codex":0.0000033704302,"about_ca_topic_score_gemma":0.0000025977504,"teacher_disagreement_score":0.12702176,"about_ca_system_score_codex":0.000022100005,"about_ca_system_score_gemma":0.000057616657,"threshold_uncertainty_score":0.49356323},"labels":[],"label_agreement":null},{"id":"W2500932025","doi":"10.1007/978-1-4939-6478-9","title":"Bioreactors in Stem Cell Biology","year":2016,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Bioreactor; Biology; Stem cell; Cell biology; Botany","score_opus":0.024700369931878706,"score_gpt":0.37405709560580214,"score_spread":0.34935672567392345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2500932025","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011353036,0.028293023,0.4321542,0.00040914697,0.0022367474,0.0028330842,0.00056007574,0.00008564248,0.52207506],"genre_scores_gemma":[0.0043112594,0.008042281,0.23476495,0.0012199781,0.00103201,0.0006624681,0.0028447332,0.0007281286,0.7463942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9927708,0.0030430856,0.00097263715,0.0018143975,0.00015634722,0.0012427489],"domain_scores_gemma":[0.9976845,0.00027328325,0.00035078858,0.0013903882,0.00011005199,0.0001910312],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0023479,0.0007758285,0.0010914847,0.0009409876,0.000036462246,0.000016886623,0.0012485909,0.002897939,0.000104622726],"category_scores_gemma":[0.00019039534,0.0006685229,0.00037011947,0.00024164785,0.00057215936,0.0000030641818,0.001008799,0.00092346745,0.000096336116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008164784,0.000077950885,0.0010766104,0.00008503803,0.00007040794,0.00010121211,0.000014916308,0.0000052377636,0.965146,0.0011538885,0.00077058456,0.03141652],"study_design_scores_gemma":[0.0011873508,0.0004453029,0.00004396202,0.00009718086,0.000019242589,0.000016653614,0.000008250663,0.000010709221,0.5015713,0.0071442206,0.48865023,0.0008056207],"about_ca_topic_score_codex":0.00004213915,"about_ca_topic_score_gemma":0.000057324985,"teacher_disagreement_score":0.48787963,"about_ca_system_score_codex":0.00028052126,"about_ca_system_score_gemma":0.00070954487,"threshold_uncertainty_score":0.9995766},"labels":[],"label_agreement":null},{"id":"W2501030996","doi":"10.1007/978-1-4939-3771-4_12","title":"Modeling Leukemogenesis in the Zebrafish Using Genetic and Xenograft Models","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Zebrafish; Transgene; Cancer research; Leukemia; Biology; Animal model; In vivo; Computational biology; Genetics; Gene","score_opus":0.05034419276825052,"score_gpt":0.4062449535359522,"score_spread":0.35590076076770166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2501030996","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36975154,0.0011339614,0.628302,0.00048570285,0.000018348639,0.00022231265,0.000006388882,0.0000047313674,0.000075016644],"genre_scores_gemma":[0.54294693,0.00042211934,0.45585784,0.0005718894,0.00004328302,0.0001161128,0.000009196975,0.000022402155,0.000010200814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99721277,0.0012707195,0.00034412372,0.0005694855,0.00012068894,0.00048220155],"domain_scores_gemma":[0.99914014,0.00013399347,0.000042362928,0.0005418785,0.00004943766,0.000092155824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016254956,0.00017592194,0.00020707014,0.00017537347,0.000054380496,0.000017524957,0.00046916708,0.00027903853,0.0000064514347],"category_scores_gemma":[0.00057600875,0.0001135259,0.00006654614,0.0003205982,0.00031084797,0.0000038513504,0.00027976642,0.00013771317,0.0000013303314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020677138,0.000029538209,0.000668338,0.0000061837636,0.00001474878,0.000008339361,0.00002715009,0.0010001266,0.9618387,0.0010693574,0.000005951741,0.035310857],"study_design_scores_gemma":[0.0038841479,0.00063350156,0.0020612027,0.0001085875,0.000059194306,0.00022662153,0.00028449777,0.2991412,0.5290009,0.15886198,0.0045350227,0.0012031603],"about_ca_topic_score_codex":0.00013845033,"about_ca_topic_score_gemma":0.00006790851,"teacher_disagreement_score":0.43283784,"about_ca_system_score_codex":0.00003565082,"about_ca_system_score_gemma":0.000099821475,"threshold_uncertainty_score":0.4629452},"labels":[],"label_agreement":null},{"id":"W2501223843","doi":"10.1007/978-1-4939-1332-9","title":"Biomimetics and Stem Cells","year":2014,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Modular Robots and Swarm Intelligence","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Biomimetics; Engineering; Nanotechnology; Materials science","score_opus":0.022325116296421588,"score_gpt":0.32780015325488787,"score_spread":0.3054750369584663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2501223843","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000031463544,0.0054211477,0.9456699,0.000008748268,0.0006933195,0.0001702374,0.000009309039,0.00006964076,0.047926232],"genre_scores_gemma":[0.000041353484,0.0010412558,0.94921696,0.00015024238,0.0000896912,0.00002001792,0.000019912934,0.000116428884,0.04930416],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99857813,0.0003470278,0.00035809996,0.00037028463,0.00005124678,0.000295238],"domain_scores_gemma":[0.9992618,0.00018786416,0.00005150771,0.00041096626,0.00002118094,0.000066706496],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000728025,0.00031600957,0.00055838854,0.00022951892,0.000014723685,0.000014888979,0.00024492387,0.00071373786,0.000033800556],"category_scores_gemma":[0.000016636817,0.00030712725,0.00007759001,0.00006259341,0.0001269298,0.0000070082815,0.00010151509,0.00044588264,0.00002360271],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000051448656,0.000011762971,0.000015915964,0.00045782173,0.00017185764,0.00008034776,0.00010541115,0.0038293214,0.42727506,0.03871085,0.0019508338,0.52738565],"study_design_scores_gemma":[0.00016943662,0.00011277191,0.0000016204892,0.00010656254,0.000056040582,0.000022483828,0.0000042358643,0.01410759,0.34713322,0.04021123,0.59728956,0.000785232],"about_ca_topic_score_codex":0.0000031579598,"about_ca_topic_score_gemma":0.0000028581117,"teacher_disagreement_score":0.59533876,"about_ca_system_score_codex":0.000061052655,"about_ca_system_score_gemma":0.000023384546,"threshold_uncertainty_score":0.9999381},"labels":[],"label_agreement":null},{"id":"W2503656250","doi":"10.1007/978-1-4939-3609-0_8","title":"In Silico Model for Developmental Toxicity: How to Use QSAR Models and Interpret Their Results","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Computer science; Quantitative structure–activity relationship; In silico; Applicability domain; Domain (mathematical analysis); Basis (linear algebra); Machine learning; Statistical model; Data mining; Artificial intelligence; Mathematics; Biology","score_opus":0.07357089907148548,"score_gpt":0.3960185946026921,"score_spread":0.32244769553120667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2503656250","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07631272,0.00003514075,0.91898555,0.004045997,0.00012050524,0.00039393027,0.00004022107,0.00002640731,0.00003954086],"genre_scores_gemma":[0.11174089,0.0000074230443,0.88645846,0.0016083003,0.0000078938465,0.00009888213,0.0000025331829,0.000012715282,0.000062936684],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9971849,0.0012766868,0.00034183468,0.00075523276,0.00007547506,0.00036591766],"domain_scores_gemma":[0.9972207,0.0022485137,0.000051503586,0.00033680737,0.000056957277,0.000085521635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025709295,0.00019761237,0.00032003663,0.0003657525,0.000027815968,0.00006018689,0.00058325933,0.00012822315,4.1809915e-7],"category_scores_gemma":[0.0016933379,0.00014803931,0.00005524952,0.00032514735,0.00007133792,0.000385395,0.00072727195,0.0000944943,6.402158e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001621624,0.000056460132,0.0001309698,0.000008767308,0.00002019264,0.000010773952,0.0017830437,0.026542181,0.6511951,0.10047606,0.0000624369,0.21955186],"study_design_scores_gemma":[0.00054341945,0.00006616772,0.00008762132,0.000025649204,0.0000010172438,0.000008564728,0.000011192162,0.66450185,0.07715302,0.25709644,0.0003304402,0.00017459912],"about_ca_topic_score_codex":0.000017091144,"about_ca_topic_score_gemma":0.000039550607,"teacher_disagreement_score":0.63795966,"about_ca_system_score_codex":0.00013415987,"about_ca_system_score_gemma":0.00011156936,"threshold_uncertainty_score":0.6036868},"labels":[],"label_agreement":null},{"id":"W2504488180","doi":"10.1007/978-1-4939-3289-4","title":"Recombinant Proteins from Plants","year":2015,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Agriculture and Agri-Food Canada","funders":"","keywords":"Recombinant DNA; Chemistry; Biochemistry; Biology; Gene","score_opus":0.03206589062144461,"score_gpt":0.37235194926578974,"score_spread":0.34028605864434514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2504488180","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002002861,0.010942238,0.8393993,0.00022002535,0.0010210794,0.0015189442,0.0016305498,0.00005500396,0.14321002],"genre_scores_gemma":[0.0003448453,0.0013028149,0.8301409,0.00077499304,0.00051880593,0.00046610003,0.011671585,0.00018028395,0.15459967],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975032,0.00055600714,0.0004820513,0.000940234,0.00010207523,0.0004163853],"domain_scores_gemma":[0.99867797,0.000051993928,0.00019864274,0.0008784049,0.000058458176,0.00013451584],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006979203,0.0004208672,0.000573877,0.00012232376,0.00003600495,0.00001402482,0.0006016665,0.001248606,0.000052067247],"category_scores_gemma":[0.00011738821,0.00039894204,0.00017568676,0.00005645584,0.00016169858,0.000001197485,0.0002122776,0.00046186105,0.00004066272],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008113652,0.00008782621,0.00006455767,0.000015829093,0.0001772453,0.000037742557,0.000026194348,0.0000080528025,0.96200514,0.0021021925,0.013449754,0.021944331],"study_design_scores_gemma":[0.00066972483,0.00021014178,0.00003540434,0.000051597504,0.000038213973,0.000019452724,0.0000059994813,0.000009005282,0.09384458,0.059243884,0.84535295,0.0005190443],"about_ca_topic_score_codex":0.00007915086,"about_ca_topic_score_gemma":0.00011398702,"teacher_disagreement_score":0.86816055,"about_ca_system_score_codex":0.0000657522,"about_ca_system_score_gemma":0.0005162547,"threshold_uncertainty_score":0.9998462},"labels":[],"label_agreement":null},{"id":"W2505123158","doi":"10.1007/978-1-4939-3389-1_52","title":"Vaccines and IP Rights: A Multifaceted Relationship","year":2016,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Miller Group (Canada)","funders":"","keywords":"Intellectual property; License; Distribution (mathematics); Business; Law and economics; Political science; Law; Economics; Mathematics","score_opus":0.027115521063043345,"score_gpt":0.360931045781663,"score_spread":0.3338155247186197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2505123158","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002862019,0.007104656,0.8778896,0.0005300191,0.00023271154,0.0007673685,0.0003472933,0.000043034466,0.11022333],"genre_scores_gemma":[0.017436516,0.0016830723,0.80972207,0.0006461376,0.00035726334,0.00021222707,0.00087155437,0.00016354745,0.16890761],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99842244,0.000204628,0.00037300267,0.0006966292,0.00004756566,0.00025574077],"domain_scores_gemma":[0.9990867,0.00012461304,0.0001404831,0.0005207436,0.00004767777,0.000079810845],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0003860895,0.00032855305,0.00035920556,0.00014299642,0.00006519626,0.000009809797,0.00022394558,0.00089360104,0.00005644492],"category_scores_gemma":[0.00010623698,0.00026055478,0.00011672359,0.000030287982,0.00016981535,0.0000016037393,0.00011647891,0.0002464838,0.000015014269],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004638572,0.000016776898,0.00034386053,0.00001856549,0.0001152184,0.000009662949,0.000013786713,0.0000013561296,0.7995125,0.17748182,0.00015462318,0.022285428],"study_design_scores_gemma":[0.0011274987,0.00017148632,0.00067168067,0.00008620229,0.00008982573,0.00006570124,0.0000030334993,0.0000109675875,0.06297672,0.18718852,0.74687314,0.00073520135],"about_ca_topic_score_codex":0.0000091841,"about_ca_topic_score_gemma":0.00004243959,"teacher_disagreement_score":0.7467185,"about_ca_system_score_codex":0.00001474342,"about_ca_system_score_gemma":0.00004372336,"threshold_uncertainty_score":0.9999847},"labels":[],"label_agreement":null},{"id":"W2505589156","doi":"10.1007/978-1-60761-594-1_24","title":"Antimicrobial and Antibiofilm Activity of Quorum Sensing Peptides and Peptide Analogues Against Oral Biofilm Bacteria","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kane Biotech (Canada)","funders":"","keywords":"Quorum sensing; Biofilm; Bacteria; Streptococcus mutans; Microbiology; Antimicrobial; Peptide; Antimicrobial peptides; Chemistry; Biology; Biochemistry","score_opus":0.02780686461434914,"score_gpt":0.3859668217139638,"score_spread":0.3581599570996147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2505589156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.973994,0.0005523153,0.024498232,0.00021816173,0.00019336017,0.00018011773,0.00007830968,0.000024933935,0.00026052265],"genre_scores_gemma":[0.697885,0.00020647698,0.30157372,0.00020185004,0.000021258373,5.2496046e-7,0.00004184771,0.000011571367,0.000057786572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965987,0.0019903895,0.0003460389,0.0005421114,0.000043881304,0.00047884864],"domain_scores_gemma":[0.99926716,0.00018065776,0.00013251825,0.0002838026,0.00006156964,0.000074303935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012495971,0.00024073523,0.00062955706,0.00029262254,0.00008816066,0.000038086786,0.00015715382,0.00042927262,0.000020501539],"category_scores_gemma":[0.00032167623,0.00022762593,0.000084196196,0.0002524276,0.0006803877,0.00007696668,0.00019402131,0.00038178815,0.000004013496],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013016247,0.000046287878,0.04010884,0.000032305485,0.000035162837,0.00012045501,0.00004974589,0.0000010269513,0.897562,0.00017168393,0.00004400222,0.061698325],"study_design_scores_gemma":[0.0006507506,0.00020790879,0.16277821,0.000045584406,0.000013695363,0.00021483738,0.0000272892,0.00009209458,0.83473915,0.00052808935,0.00045588083,0.00024648831],"about_ca_topic_score_codex":0.00022970632,"about_ca_topic_score_gemma":0.00016574017,"teacher_disagreement_score":0.2770755,"about_ca_system_score_codex":0.000020584563,"about_ca_system_score_gemma":0.00003729528,"threshold_uncertainty_score":0.9282316},"labels":[],"label_agreement":null},{"id":"W2505644712","doi":"10.1007/978-1-61779-827-6","title":"Microbial Systems Biology","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. Army Medical Research Institute of Infectious Diseases; Los Alamos National Laboratory; Lawrence Berkeley National Laboratory; Oak Ridge National Laboratory; Macquarie University; University of Toronto Scarborough; School of Medicine, Indiana University; U.S. Department of Energy; Technische Universiteit Delft; Earth Sciences Division; University of New South Wales; Norges Teknisk-Naturvitenskapelige Universitet; Lawrence Livermore National Laboratory; University of Toronto; U.S. Army","keywords":"Biology; Computational biology; Evolutionary biology; Computer science","score_opus":0.023420513245285858,"score_gpt":0.35395555069501794,"score_spread":0.33053503744973206,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2505644712","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012727639,0.0047415877,0.25826812,0.00015552311,0.0053838785,0.0012806809,0.000154047,0.00011640225,0.72862697],"genre_scores_gemma":[0.001550954,0.0004999721,0.6126032,0.004013577,0.00088335655,0.0002711981,0.0031596422,0.00028968774,0.37672845],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99192625,0.005804534,0.0006408988,0.00070098665,0.000041593503,0.0008857624],"domain_scores_gemma":[0.99797565,0.0006313253,0.00033517554,0.00092903915,0.00001282835,0.00011599438],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.002192582,0.00051525625,0.0010483935,0.00019474013,0.00011306143,0.000008808595,0.0010871778,0.0023523783,0.006282377],"category_scores_gemma":[0.0001709468,0.00050297595,0.00021182893,0.0001518594,0.001197547,0.000030277513,0.0013039528,0.0015297808,0.0011880478],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004800953,0.00011552963,0.0012028496,0.000044574215,0.0001060076,0.000021713946,0.00013632298,0.00009418961,0.94420695,0.02683191,0.021086358,0.0061056064],"study_design_scores_gemma":[0.00033640393,0.00019851701,0.000111485075,0.000023347573,0.00005371045,0.000060939085,0.000005202073,0.000017373659,0.0023121908,0.048621975,0.9476484,0.00061043614],"about_ca_topic_score_codex":0.00043418352,"about_ca_topic_score_gemma":0.00024467256,"teacher_disagreement_score":0.9418947,"about_ca_system_score_codex":0.00044126838,"about_ca_system_score_gemma":0.00008051555,"threshold_uncertainty_score":0.9997422},"labels":[],"label_agreement":null},{"id":"W2506965724","doi":"10.1007/978-1-59745-407-0","title":"Recombinant Proteins From Plants","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National de la Recherche Agronomique; Universität Regensburg; Centre National de la Recherche Scientifique; Université de Rouen; Bayer HealthCare; Consejo Nacional de Investigaciones Científicas y Técnicas; Arkansas Biosciences Institute; Université Laval; Arkansas State University","keywords":"Recombinant DNA; Biology; Computational biology; Protein expression; Cell biology; Biotechnology; Genetics; Gene","score_opus":0.020729244874365022,"score_gpt":0.3572848721753519,"score_spread":0.33655562730098687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2506965724","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016225172,0.008086073,0.8641417,0.00025777548,0.00046835214,0.0013494389,0.0006655615,0.00005149942,0.1233571],"genre_scores_gemma":[0.00033913812,0.0020475914,0.86302626,0.0013709493,0.00042963942,0.00027409606,0.008113887,0.00012784428,0.1242706],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99750304,0.00049740396,0.00049995875,0.0009799348,0.000082990104,0.00043669084],"domain_scores_gemma":[0.9987488,0.000057229365,0.00019910203,0.0008639427,0.000032203236,0.00009877205],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00046325856,0.0004375781,0.00057464885,0.00013031159,0.000046060723,0.000014862351,0.0005933101,0.0012675663,0.000057271478],"category_scores_gemma":[0.00007552556,0.00042072518,0.00021785223,0.000057216424,0.00013110395,0.0000011411348,0.00012796979,0.00048621948,0.000028026094],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005629606,0.000089194975,0.000036025962,0.000010656122,0.000119581695,0.000034747147,0.000013547794,0.0000066918083,0.9408474,0.0023023675,0.0053264224,0.051157083],"study_design_scores_gemma":[0.0005934348,0.0002719667,0.00014088709,0.00006728457,0.0000396017,0.000020352949,0.0000030463095,0.0000079158945,0.16287176,0.05823496,0.7771793,0.0005695146],"about_ca_topic_score_codex":0.000049151957,"about_ca_topic_score_gemma":0.00008116324,"teacher_disagreement_score":0.7779756,"about_ca_system_score_codex":0.000047294478,"about_ca_system_score_gemma":0.00028468017,"threshold_uncertainty_score":0.99982446},"labels":[],"label_agreement":null},{"id":"W2508332733","doi":"10.1007/978-1-4939-3801-8","title":"The Tumor Microenvironment","year":2016,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Jewish General Hospital","funders":"","keywords":"Tumor microenvironment; Cancer research; Medicine; Tumor cells","score_opus":0.011367462215561097,"score_gpt":0.32282778008295804,"score_spread":0.3114603178673969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508332733","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000059691374,0.27788758,0.3003994,0.0013728227,0.01312938,0.0015805233,0.00013756542,0.00011638847,0.40531668],"genre_scores_gemma":[0.000009589682,0.002823194,0.060113285,0.0011350048,0.000097351105,0.0002263038,0.00012430616,0.00012371485,0.93534726],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9949008,0.0027822405,0.000692106,0.0007648211,0.00003159202,0.0008284457],"domain_scores_gemma":[0.9970031,0.0013390344,0.00037504022,0.0012339889,0.000030246276,0.000018586088],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0019165721,0.0005055844,0.0007213427,0.0001601979,0.00016751495,0.000010940539,0.001097099,0.001101742,0.0009267648],"category_scores_gemma":[0.00027458894,0.00031728405,0.00028484417,0.00005398655,0.0016042374,0.000011053599,0.00060858123,0.0011457928,0.0011975081],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007275748,0.000021577558,0.000020654676,0.0000164598,0.00027469045,0.00003683341,0.000030356603,5.595775e-7,0.8926394,0.011923931,0.016434425,0.07852837],"study_design_scores_gemma":[0.0005241392,0.00009069412,0.000009282947,0.00006911945,0.000038733644,0.00006112717,0.000005145909,1.0448216e-7,0.20702098,0.029563641,0.76231563,0.00030138766],"about_ca_topic_score_codex":0.000009564722,"about_ca_topic_score_gemma":0.000007183842,"teacher_disagreement_score":0.7458812,"about_ca_system_score_codex":0.0005138845,"about_ca_system_score_gemma":0.00026661498,"threshold_uncertainty_score":0.9999865},"labels":[],"label_agreement":null},{"id":"W2508398069","doi":"10.1007/978-1-4939-3801-8_11","title":"Viral Engineering of Chimeric Antigen Receptor Expression on Murine and Human T Lymphocytes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Chimeric antigen receptor; Adoptive cell transfer; Receptor; Antigen; Virology; Biology; Immunology; Cancer research; Molecular biology; Immunotherapy; Immune system; T cell; Genetics","score_opus":0.02493786642087454,"score_gpt":0.4078942568493336,"score_spread":0.3829563904284591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508398069","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90359765,0.0006389849,0.09491248,0.00010973255,0.000070818794,0.0002075447,0.000002654277,0.000019936197,0.00044020818],"genre_scores_gemma":[0.39427176,0.00044133398,0.6045372,0.000104526145,0.000082168306,0.000035438876,0.000008911583,0.00004519194,0.0004735174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883544,0.00038955122,0.00020936837,0.0002624507,0.00007863595,0.00022456307],"domain_scores_gemma":[0.999374,0.00022046543,0.000044314187,0.0002743817,0.000025582247,0.000061288076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006713562,0.0001183257,0.00032210778,0.00024219025,0.000014130203,0.0000019301638,0.00008440748,0.00012309827,0.00032922887],"category_scores_gemma":[0.00032568874,0.000078241756,0.000053231895,0.00012597897,0.000117889715,0.000010874069,0.000087697845,0.00010296186,0.000002666536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015776185,0.000041971394,0.005266518,0.000025410576,0.000023252584,0.00001041111,0.000035855668,0.0000015609982,0.9280871,0.0003694494,0.0000053569925,0.06597536],"study_design_scores_gemma":[0.001418444,0.0006794874,0.004679218,0.00012877896,0.000004585436,0.000010490694,0.0000043500722,0.000027660799,0.9892594,0.00032750305,0.0033758034,0.000084238614],"about_ca_topic_score_codex":0.000027868362,"about_ca_topic_score_gemma":3.4836893e-7,"teacher_disagreement_score":0.50962466,"about_ca_system_score_codex":0.00005280148,"about_ca_system_score_gemma":0.000021077612,"threshold_uncertainty_score":0.3604825},"labels":[],"label_agreement":null},{"id":"W2508482603","doi":"10.1007/978-1-62703-191-2_11","title":"Measuring Transport and Accumulation of Radiolabeled Substrates in Oocytes and Embryos","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Institute of Human Development, Child and Youth Health; Canadian Institutes of Health Research","keywords":"Embryo; Transporter; Membrane transport; Oocyte; Chemistry; Cell biology; Metabolism; Transmembrane protein; Ion transporter; Biophysics; Biochemistry; Membrane; Biology; Gene; Receptor","score_opus":0.05380210888185979,"score_gpt":0.3823800053342073,"score_spread":0.32857789645234753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508482603","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91458714,0.018271297,0.06674304,0.000017865843,0.00006252529,0.00014949634,0.0000031945767,0.0000026380537,0.00016282595],"genre_scores_gemma":[0.8585922,0.00072094094,0.14056788,0.000044240664,0.000018594868,0.000014421022,0.000022652157,0.000010663156,0.000008385532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875534,0.00043849088,0.00027631462,0.00024708314,0.000037668695,0.00024508632],"domain_scores_gemma":[0.99966496,0.000037853322,0.00006317986,0.00016137837,0.000020429961,0.000052186166],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001039012,0.00013015428,0.00024909648,0.00011127511,0.000013391598,0.0000027686806,0.00007586986,0.00018780943,0.00000486737],"category_scores_gemma":[0.00015892848,0.00012595486,0.000031116648,0.00011122554,0.00012370257,0.0000041544204,0.000038408798,0.00007315107,1.3380358e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032164902,0.00002467099,0.32983443,0.000019762643,0.000011803713,4.641489e-7,0.00009501701,0.000024448544,0.661513,0.00035033582,3.51019e-7,0.008093573],"study_design_scores_gemma":[0.0007816408,0.000061283106,0.30074584,0.000009973521,0.000015378926,0.0000074002774,0.00008218044,0.000077205164,0.696791,0.00089330657,0.00038708877,0.00014768579],"about_ca_topic_score_codex":0.00006247864,"about_ca_topic_score_gemma":0.000048362657,"teacher_disagreement_score":0.073824845,"about_ca_system_score_codex":0.0000019154145,"about_ca_system_score_gemma":0.000018105617,"threshold_uncertainty_score":0.513629},"labels":[],"label_agreement":null},{"id":"W2508611939","doi":"10.1007/978-1-4939-3801-8_16","title":"Intravital Microscopy for Imaging the Tumor Microenvironment in Live Mice","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; Alberta Bone and Joint Health Institute; University of Calgary","funders":"","keywords":"Intravital microscopy; Stromal cell; Tumor microenvironment; Live cell imaging; Pathology; Immune system; Cell; In vivo; Biology; Cell biology; Medicine; Immunology","score_opus":0.011273367040619769,"score_gpt":0.3284879501476803,"score_spread":0.3172145831070605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508611939","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3792532,0.0012420896,0.61840355,0.00048126836,0.0002168911,0.00032382883,0.000031370084,0.000004325114,0.000043454904],"genre_scores_gemma":[0.5140221,0.00019009097,0.48310307,0.0021787642,0.00012135774,0.00018864326,0.0000438114,0.000050767034,0.00010139122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981584,0.0005277437,0.00031304703,0.0005016471,0.000036245063,0.0004629371],"domain_scores_gemma":[0.99940896,0.00012604207,0.000073296695,0.00033081087,0.000020528098,0.000040338946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008911224,0.00019904555,0.00021548249,0.00006502135,0.000045178043,0.000011082802,0.0003361838,0.0001293148,0.0000139247195],"category_scores_gemma":[0.00021896104,0.00013097853,0.000118687,0.000067120636,0.00022323766,0.0000024902681,0.000116344985,0.000110330424,0.0000039161537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013471153,0.00007732795,0.011289457,0.000008273559,0.000017230721,0.000007178878,0.00006786186,0.0000047383896,0.9754951,0.000172322,0.000033071017,0.012692743],"study_design_scores_gemma":[0.0013695882,0.0001749651,0.00128813,0.000023333307,0.000010941691,0.000018795836,0.000078348334,0.000051449657,0.98005474,0.0013908253,0.015325198,0.00021368831],"about_ca_topic_score_codex":0.000033634096,"about_ca_topic_score_gemma":0.000053428244,"teacher_disagreement_score":0.13530049,"about_ca_system_score_codex":0.000044338376,"about_ca_system_score_gemma":0.000036933172,"threshold_uncertainty_score":0.53411496},"labels":[],"label_agreement":null},{"id":"W2508844583","doi":"10.1007/978-1-4939-3801-8_19","title":"CRISPR/Cas9 Genome Editing as a Strategy to Study the Tumor Microenvironment in Transgenic Mice","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Genome editing; Transcription activator-like effector nuclease; Zinc finger nuclease; Cas9; Biology; Transgene; Effector; Computational biology; Genome; Genome engineering; Genetically modified organism; Genetics; Gene; Cell biology","score_opus":0.015353722663827998,"score_gpt":0.3999557227793051,"score_spread":0.38460200011547707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2508844583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56632495,0.00081631285,0.43194908,0.00025285294,0.0001191255,0.00043608987,0.0000059142553,0.000005584911,0.00009011753],"genre_scores_gemma":[0.92721343,0.00007034222,0.07176009,0.00052950234,0.00013343792,0.00019027936,0.000006384201,0.000036714144,0.000059840415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997588,0.00082896283,0.00039361586,0.0006205448,0.00007477762,0.0004941167],"domain_scores_gemma":[0.99928993,0.00006666397,0.000050126007,0.0004950373,0.000016799137,0.00008143042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012355567,0.0002444766,0.00025449722,0.0001143895,0.000038562055,0.000011224798,0.00041931853,0.00012737623,0.000047436624],"category_scores_gemma":[0.00020736891,0.00016870283,0.00009120288,0.0001802494,0.00007321488,0.0000018186266,0.00018985286,0.00015228186,0.0000131917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044388726,0.000099258425,0.0018111677,0.0000043448867,0.00004264826,0.000023055687,0.00019125926,0.0005808728,0.98150694,0.000033724355,0.0000055596806,0.015656767],"study_design_scores_gemma":[0.0010951041,0.0010836377,0.010226228,0.000012148163,0.000021746711,0.000037018734,0.0005699998,0.000015703095,0.981078,0.0003370554,0.00521725,0.00030606944],"about_ca_topic_score_codex":0.000059163485,"about_ca_topic_score_gemma":0.00010479409,"teacher_disagreement_score":0.36088848,"about_ca_system_score_codex":0.000038822993,"about_ca_system_score_gemma":0.000030861644,"threshold_uncertainty_score":0.68795013},"labels":[],"label_agreement":null},{"id":"W2509118086","doi":"10.1007/978-1-4939-3801-8_22","title":"RNA-Seq as a Tool to Study the Tumor Microenvironment","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University; McGill University and Génome Québec Innovation Centre","funders":"","keywords":"Transcriptome; Computational biology; Biology; RNA; RNA-Seq; Genome; Gene; Identification (biology); Non-coding RNA; Genomics; Genetics; Gene expression","score_opus":0.019800691482539805,"score_gpt":0.37369658364413455,"score_spread":0.3538958921615947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2509118086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58635795,0.0004114927,0.41138306,0.0010419298,0.00010156547,0.00043396783,0.0000061835294,0.000005034248,0.00025879327],"genre_scores_gemma":[0.7533794,0.00012464735,0.2408052,0.003832876,0.00011137168,0.0007634228,0.000007697006,0.000040329465,0.00093503733],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980004,0.00085954386,0.00026091898,0.0005179021,0.00006528801,0.0002959624],"domain_scores_gemma":[0.99902743,0.000038699556,0.00006215502,0.0007925989,0.000025010362,0.000054130316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095250027,0.00016460933,0.00016270761,0.00005313827,0.0000616745,0.0000110438705,0.00041856736,0.0000864549,0.000086721346],"category_scores_gemma":[0.00027756067,0.00009558333,0.00007835121,0.000122033525,0.00010830298,0.0000013425574,0.0002533835,0.00007439361,0.000045464167],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049677197,0.00010694324,0.001603338,7.838765e-7,0.000044648277,0.0000074325308,0.000049147784,0.000010026777,0.9225295,0.00045276026,0.000087118686,0.075058624],"study_design_scores_gemma":[0.0006912517,0.0006798871,0.0047313226,0.0000048559214,0.000017914834,0.000017270015,0.00012570723,0.0000023162766,0.9035719,0.0015396902,0.088399604,0.00021829577],"about_ca_topic_score_codex":0.000037991824,"about_ca_topic_score_gemma":0.000014508113,"teacher_disagreement_score":0.17057788,"about_ca_system_score_codex":0.00003474908,"about_ca_system_score_gemma":0.000039584167,"threshold_uncertainty_score":0.3897775},"labels":[],"label_agreement":null},{"id":"W2509681005","doi":"10.1007/978-1-4939-3801-8_2","title":"Laser Capture Microdissection as a Tool to Study Tumor Stroma","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Laser capture microdissection; Microdissection; Stromal cell; Isolation (microbiology); Biology; RNA; Computational biology; Stroma; DNA; Cell biology; Cancer research; Gene; Gene expression; Bioinformatics; Genetics; Immunohistochemistry; Immunology","score_opus":0.011096579596443638,"score_gpt":0.3828072383167533,"score_spread":0.3717106587203097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2509681005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5022848,0.00007899266,0.49637222,0.00029896267,0.00006758734,0.00057835924,0.000013544117,0.00002670211,0.00027881298],"genre_scores_gemma":[0.54636127,0.000016065258,0.45079333,0.0016668866,0.000066315595,0.0006581873,0.000035361805,0.000042934866,0.00035962352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973443,0.00087835046,0.00037875993,0.0008978748,0.00006607065,0.00043464042],"domain_scores_gemma":[0.9988664,0.000033803928,0.00009393355,0.0008185182,0.00008288502,0.00010448642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082555524,0.00028372183,0.00028783706,0.0001560587,0.00006772062,0.000012394888,0.000412912,0.0002967089,0.00006873558],"category_scores_gemma":[0.00037735055,0.00021397721,0.0001276355,0.00027074077,0.00009941456,0.0000024190822,0.00030222768,0.00014128776,0.000033055174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068903,0.00019656027,0.005941248,0.0000018211816,0.000048554164,0.00002676065,0.000023573471,0.0000022480233,0.9664967,0.00068952655,0.00014789752,0.026356218],"study_design_scores_gemma":[0.0007492574,0.0010267262,0.0025050202,0.000009278355,0.000020208556,0.00007428732,0.000062290004,0.0000026806354,0.9691742,0.0020389087,0.023978552,0.00035857424],"about_ca_topic_score_codex":0.00006339973,"about_ca_topic_score_gemma":0.000044090175,"teacher_disagreement_score":0.045578875,"about_ca_system_score_codex":0.00003384915,"about_ca_system_score_gemma":0.000053257754,"threshold_uncertainty_score":0.8725738},"labels":[],"label_agreement":null},{"id":"W2509942246","doi":"10.1007/978-1-4939-3801-8_4","title":"Studies on the Tumor Vasculature and Coagulant Microenvironment","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital","funders":"Fonds de Recherche du Québec - Santé; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Cancer Research Society","keywords":"Angiogenesis; Coagulation; Effector; Tumor microenvironment; Cancer research; In vivo; Biology; Mural cell; Bone marrow; Cancer; Endothelial stem cell; Computational biology; Cell biology; In vitro; Chemistry; Immunology; Tumor cells; Medicine; Biochemistry; Genetics; Internal medicine","score_opus":0.02753959607893743,"score_gpt":0.36787362752941,"score_spread":0.3403340314504726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2509942246","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83915687,0.021699013,0.13578136,0.0025285452,0.00029978884,0.00030307125,0.000017373635,0.000008010098,0.00020600315],"genre_scores_gemma":[0.7945148,0.0061408347,0.1891861,0.008956589,0.0002795417,0.00027169124,0.000014130456,0.00006769021,0.0005686745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985009,0.00062703365,0.00018369536,0.00041326933,0.000047183905,0.00022791089],"domain_scores_gemma":[0.9993842,0.000116866555,0.000064431464,0.0003801861,0.00001977838,0.000034529392],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078735204,0.00016759461,0.00019687956,0.000034358884,0.000049857423,0.000005177054,0.00015810604,0.00012093784,0.00001474684],"category_scores_gemma":[0.00028629057,0.00008281361,0.00009159377,0.00004807197,0.0003328251,8.9480864e-7,0.00018472748,0.00006530599,0.0000038943235],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003521592,0.000017948269,0.0023278056,0.0000046477494,0.00009869342,0.0000064698784,0.00002269936,0.000005960142,0.987047,0.0030209601,0.00020459683,0.007208009],"study_design_scores_gemma":[0.0003592473,0.00023799777,0.0013476604,0.000029227742,0.000017235476,0.000019792247,0.00006658339,0.0000038695002,0.9544075,0.0021420252,0.041201923,0.00016692416],"about_ca_topic_score_codex":0.0000026059226,"about_ca_topic_score_gemma":0.0000059787385,"teacher_disagreement_score":0.05340474,"about_ca_system_score_codex":0.000021302523,"about_ca_system_score_gemma":0.00001453492,"threshold_uncertainty_score":0.3377041},"labels":[],"label_agreement":null},{"id":"W2510002611","doi":"10.1007/978-1-4939-3801-8_8","title":"Analyzing the Tumor Microenvironment by Flow Cytometry","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Fondation de l'Hôpital général juif","keywords":"Flow cytometry; Staining; Cytometry; Tumor microenvironment; Pathology; Biology; Medicine; Immunology; Tumor cells; Cancer research","score_opus":0.012011010005788518,"score_gpt":0.31066458656016605,"score_spread":0.2986535765543775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510002611","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16535372,0.0028801253,0.8306937,0.0005229792,0.00020025055,0.00014113229,0.000025281466,0.000008667527,0.00017414708],"genre_scores_gemma":[0.38653028,0.0008686461,0.6096485,0.0020223742,0.00017115653,0.00007999363,0.00007342294,0.000071753944,0.0005338547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997926,0.0008363974,0.00029195443,0.0004989927,0.000053353775,0.00039327508],"domain_scores_gemma":[0.99925435,0.00008394814,0.00007583354,0.00050657854,0.000017816117,0.000061502484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087415497,0.00020800787,0.00022033199,0.000069480346,0.000060834114,0.000011693785,0.00040075585,0.00018311286,0.00004601975],"category_scores_gemma":[0.00021822714,0.00012480291,0.00013819255,0.00014413983,0.00026178904,0.0000018955518,0.00013907485,0.00012797197,0.0000094250945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042160766,0.00004830595,0.008689198,0.0000038103954,0.00004308172,0.000005073141,0.0000097303555,0.000008573801,0.95438236,0.000053580065,0.0002450246,0.036469102],"study_design_scores_gemma":[0.0005644173,0.00016685539,0.0004233263,0.000010084509,0.000015354433,0.000013913648,0.00001069856,0.000044258144,0.94839317,0.00048592294,0.04966648,0.00020550424],"about_ca_topic_score_codex":0.00001865182,"about_ca_topic_score_gemma":0.000007807388,"teacher_disagreement_score":0.22117658,"about_ca_system_score_codex":0.000033277585,"about_ca_system_score_gemma":0.000024032923,"threshold_uncertainty_score":0.5089315},"labels":[],"label_agreement":null},{"id":"W2510595058","doi":"10.1007/978-1-4939-3816-2_15","title":"Impact Acceleration Model of Diffuse Traumatic Brain Injury","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Traumatic Brain Injury and Neurovascular Disturbances","field":"Medicine","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Natural Resources; University of Alberta","funders":"","keywords":"Diffuse axonal injury; Traumatic brain injury; Animal model; Medicine; Skull; Parenchyma; Rat model; Physical medicine and rehabilitation; Acceleration; Surgery; Pathology; Internal medicine; Physics","score_opus":0.07304016162812554,"score_gpt":0.43787511278407787,"score_spread":0.3648349511559523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510595058","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4836466,0.0001147802,0.51526546,0.0005022483,0.000044504137,0.00019511125,0.000009763215,0.000016735676,0.00020483005],"genre_scores_gemma":[0.6480261,0.000035406407,0.3513916,0.0004103119,0.00001500696,0.000033552213,0.0000063226976,0.000017792614,0.000063900334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804395,0.00083072326,0.00047365908,0.0003089837,0.000099088866,0.00024356463],"domain_scores_gemma":[0.99887216,0.00042000986,0.00012976419,0.00046384736,0.00004483579,0.000069408656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010525439,0.00017031078,0.0005055513,0.00020438862,0.000017730143,0.0000038438543,0.00013834139,0.00017342754,0.000073225696],"category_scores_gemma":[0.0011553485,0.00010285329,0.00022780216,0.00020680574,0.00017835436,0.000046091318,0.000036915124,0.00012759985,0.000003481288],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015331521,0.0001979106,0.0033917208,0.000048080532,0.00007047036,0.000004198815,0.00013811587,0.000015173181,0.8919363,0.0023425655,0.000036877413,0.10166525],"study_design_scores_gemma":[0.0042133913,0.0013803735,0.029060652,0.00023276078,0.000107215674,0.000040761355,0.000032039938,0.003966925,0.9256792,0.034845073,0.0001293379,0.00031223983],"about_ca_topic_score_codex":0.000011315495,"about_ca_topic_score_gemma":0.000002556413,"teacher_disagreement_score":0.1643795,"about_ca_system_score_codex":0.000043668086,"about_ca_system_score_gemma":0.00006880846,"threshold_uncertainty_score":0.41942355},"labels":[],"label_agreement":null},{"id":"W2510661803","doi":"10.1007/978-1-4939-3801-8_20","title":"Metabolomics Analyses of Cancer Cells in Controlled Microenvironments","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Metabolomics; Computational biology; Cancer; Biology; Bioinformatics; Genetics","score_opus":0.024112910407262957,"score_gpt":0.402165367761906,"score_spread":0.37805245735464305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510661803","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7268819,0.012358153,0.25976202,0.00016050253,0.0002273248,0.00030494586,0.000046415007,0.0000032517517,0.00025546193],"genre_scores_gemma":[0.5906854,0.012239836,0.39620373,0.00031081357,0.000052553078,0.00017305849,0.0000131209645,0.0000355582,0.00028590148],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768937,0.000839177,0.0005600171,0.00048825232,0.0000601908,0.00036301336],"domain_scores_gemma":[0.99922585,0.00010115549,0.00021780108,0.0003800639,0.000033200595,0.000041896026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009182553,0.0002211214,0.0007587013,0.00025208542,0.0000151326685,0.0000029650328,0.0002618223,0.00021229452,0.000048448423],"category_scores_gemma":[0.0003409694,0.0001510622,0.00019120585,0.00020777735,0.00021017366,0.0000020387295,0.00020728774,0.000082578146,0.0000015254619],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027233,0.000083597835,0.01413311,0.000006470645,0.00022726179,0.000003408886,0.000008288314,0.000037931353,0.97789204,0.00040329128,0.000013900093,0.0069183838],"study_design_scores_gemma":[0.0038711417,0.00012380852,0.0029351509,0.000010416627,0.000052492636,9.1778344e-7,0.0000146488655,0.0000122983665,0.9880002,0.0011439415,0.003656788,0.00017820403],"about_ca_topic_score_codex":0.00012114871,"about_ca_topic_score_gemma":0.0000817583,"teacher_disagreement_score":0.13644171,"about_ca_system_score_codex":0.000028992821,"about_ca_system_score_gemma":0.00003785339,"threshold_uncertainty_score":0.61601377},"labels":[],"label_agreement":null},{"id":"W2510853686","doi":"10.1007/978-1-4939-4011-0_16","title":"New Mouse Models to Investigate the Efficacy of Drug Combinations in Human Chronic Myeloid Leukemia","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chronic Myeloid Leukemia Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Terry Fox Research Institute; BC Cancer Agency","funders":"","keywords":"Myeloid leukemia; Drug; Medicine; Pharmacology; Cancer research","score_opus":0.03707487485085719,"score_gpt":0.37823962013151047,"score_spread":0.34116474528065327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2510853686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68708426,0.0005439838,0.30858386,0.0021523153,0.00007922536,0.00082423567,0.000006011957,0.000030605286,0.0006954875],"genre_scores_gemma":[0.6086448,0.000080758364,0.38860327,0.00066349853,0.000049917984,0.00012475331,0.0000206212,0.000051231327,0.0017611617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973973,0.001006252,0.0005490703,0.00044909626,0.00012406104,0.00047422887],"domain_scores_gemma":[0.9983037,0.0005609575,0.00012214415,0.00078605185,0.000049443013,0.00017771531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011842978,0.00022473122,0.00051900075,0.0003481845,0.00003535961,0.0000042082456,0.00033499085,0.00017221896,0.00006668164],"category_scores_gemma":[0.0006801797,0.00013899883,0.00011012973,0.0005100135,0.00022730137,0.000032791548,0.00019190066,0.0002556347,0.000012998049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049320217,0.000097487646,0.002110925,0.000020533043,0.000062993655,0.000022676215,0.0005413433,0.0005886804,0.95161575,0.0140293725,0.000112756665,0.030748153],"study_design_scores_gemma":[0.014340719,0.00055929314,0.006282713,0.00029264708,0.00008044818,0.000022520655,0.000044260076,0.00058817473,0.93397146,0.042214297,0.0013239589,0.000279477],"about_ca_topic_score_codex":0.0012495241,"about_ca_topic_score_gemma":0.00032139552,"teacher_disagreement_score":0.08001939,"about_ca_system_score_codex":0.0021950179,"about_ca_system_score_gemma":0.0010460918,"threshold_uncertainty_score":0.57398957},"labels":[],"label_agreement":null},{"id":"W2511139994","doi":"10.1007/978-1-4939-3801-8_23","title":"Sample Preparation for Mass Spectrometry Analysis of Protein–Protein Interactions in Cancer Cell Lines and Tissues","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec; York University; Université Laval; PROTEO; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"Protein–protein interaction; Computational biology; Chemistry; Cancer cell; Signal transduction; Mass spectrometry; Biology; Cancer; Cell biology; Genetics; Chromatography","score_opus":0.027541501971705247,"score_gpt":0.45025391343138027,"score_spread":0.42271241145967503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2511139994","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16337894,0.0003603405,0.8355612,0.00012358856,0.0000054308002,0.00031624848,0.00009491456,0.000015178075,0.00014413621],"genre_scores_gemma":[0.13154887,0.00009724698,0.86680573,0.000008155216,0.000011752894,0.001330729,0.000021424816,0.000009374313,0.00016673341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992113,0.00008023356,0.0002808427,0.0002735206,0.00002342485,0.00013066262],"domain_scores_gemma":[0.9993624,0.00021028884,0.00014513098,0.0002215864,0.000042087882,0.000018487299],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024387497,0.000091594105,0.00025005869,0.00016935573,0.000016567088,0.000003540994,0.00009384192,0.00008930706,0.00012347571],"category_scores_gemma":[0.00020395772,0.00007488033,0.000058567104,0.0002957746,0.000054606957,0.000030622265,0.00003582425,0.00006351548,8.9123624e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000317895,0.000033972352,0.001864698,0.000029057197,0.000038376358,1.5273409e-7,0.000022323802,0.00002430878,0.9854135,0.004138891,4.830193e-7,0.008402428],"study_design_scores_gemma":[0.00017374461,0.000030628784,0.00004072622,0.000028356404,0.000038647762,1.542032e-7,0.000014382587,0.00076199515,0.9489206,0.04893097,0.00097353756,0.000086257256],"about_ca_topic_score_codex":0.00044647802,"about_ca_topic_score_gemma":0.00026180613,"teacher_disagreement_score":0.04479208,"about_ca_system_score_codex":0.00007075947,"about_ca_system_score_gemma":0.000014876566,"threshold_uncertainty_score":0.30535313},"labels":[],"label_agreement":null},{"id":"W2512501910","doi":"10.1007/978-1-4939-3801-8_17","title":"Development of a Patient-Derived Xenograft Model Using Brain Tumor Stem Cell Systems to Study Cancer","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Context (archaeology); In vivo; Cancer research; Cancer; Cancer stem cell; Medicine; Stem cell; Brain tumor; Oncology; Pathology; Biology; Internal medicine; Cell biology; Biotechnology","score_opus":0.06256811335075026,"score_gpt":0.4116256336252833,"score_spread":0.3490575202745331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2512501910","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53207606,0.00053141447,0.4666219,0.000044514014,0.00011781939,0.0005686697,0.000008201073,0.000007688634,0.00002374836],"genre_scores_gemma":[0.38475993,0.0000068149793,0.61479896,0.00023100837,0.000010486449,0.00013971486,8.777019e-7,0.000021504646,0.000030687144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979493,0.0006400669,0.0005670564,0.00039996888,0.00012363378,0.00031999784],"domain_scores_gemma":[0.999217,0.000083799125,0.0001620952,0.000323604,0.0000936369,0.000119875214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091684144,0.00018027957,0.00058578426,0.00023272836,0.000026434978,0.0000034962513,0.000108930835,0.000069556394,0.000018453675],"category_scores_gemma":[0.00004961711,0.00012329397,0.000070846065,0.00026420207,0.000041176507,0.0000115521025,0.0001345542,0.00007747859,0.0000013289906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012657847,0.0001964429,0.0013841166,0.00006315816,0.00007994153,0.000022851647,0.0016792819,0.00050165836,0.8820654,0.000014335667,0.000004119295,0.11386209],"study_design_scores_gemma":[0.0017755576,0.0003827582,0.00011491434,0.00014851344,0.000075973476,0.000007809747,0.0010315946,0.00054799515,0.99425256,0.000026862544,0.0014531928,0.00018228481],"about_ca_topic_score_codex":0.00020690328,"about_ca_topic_score_gemma":0.00003594889,"teacher_disagreement_score":0.14817707,"about_ca_system_score_codex":0.00019240982,"about_ca_system_score_gemma":0.00027766314,"threshold_uncertainty_score":0.50277823},"labels":[],"label_agreement":null},{"id":"W2513312088","doi":"10.1007/978-1-4939-3801-8_15","title":"Visualizing the Tumor Microenvironment of Liver Metastasis by Spinning Disk Confocal Microscopy","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health; Alberta Innovates - Health Solutions","keywords":"Intravital microscopy; Confocal; Stroma; Confocal microscopy; Microscopy; Tumor cells; Pathology; Metastasis; Confocal laser scanning microscopy; Biology; Cell biology; Medicine; Biophysics; Cancer research; Optics; Physics; Immunohistochemistry; Cancer","score_opus":0.01241911658812473,"score_gpt":0.3901522517694242,"score_spread":0.3777331351812995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513312088","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0974479,0.004766993,0.8971727,0.0001541043,0.000064259744,0.00029036702,0.000052806,0.000013235956,0.000037641843],"genre_scores_gemma":[0.06761439,0.00078713306,0.930687,0.00066986994,0.000025841544,0.0000798963,0.000027669457,0.000045491546,0.00006270855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975,0.0009719145,0.00045206377,0.0005672443,0.000074789605,0.0004339593],"domain_scores_gemma":[0.9990024,0.00009684263,0.00021662182,0.0005965547,0.00003527647,0.000052297666],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009813718,0.00026244207,0.0003396823,0.000069566915,0.000052725944,0.000007522781,0.0004923578,0.0001841126,0.000026688904],"category_scores_gemma":[0.00031605913,0.00016747417,0.00014031281,0.000119426324,0.00079632504,0.000004432479,0.00038103483,0.0001391021,0.0000029175935],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006495094,0.000051343202,0.0016273019,0.000011021245,0.000043649303,0.0000056525396,0.000023650016,0.0000017708143,0.9801706,0.0003395491,0.00017382702,0.017486697],"study_design_scores_gemma":[0.00035516225,0.000302035,0.00018386194,0.00004144007,0.000020876656,0.000017066328,0.000028455432,0.0000075537178,0.97657806,0.0004773678,0.021773322,0.00021481758],"about_ca_topic_score_codex":0.000040668983,"about_ca_topic_score_gemma":0.0000051775646,"teacher_disagreement_score":0.033514313,"about_ca_system_score_codex":0.000043486572,"about_ca_system_score_gemma":0.000032417935,"threshold_uncertainty_score":0.6829398},"labels":[],"label_agreement":null},{"id":"W2513908572","doi":"10.1007/978-1-4939-3801-8_12","title":"Methods to Evaluate the Antitumor Activity of Immune Checkpoint Inhibitors in Preclinical Studies","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Immune system; Context (archaeology); Medicine; Immune checkpoint; Cancer; Cancer research; Immunology; Immunotherapy; Biology; Internal medicine","score_opus":0.11265200890247054,"score_gpt":0.5397259188556498,"score_spread":0.4270739099531793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2513908572","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6494545,0.006698207,0.33603284,0.006388038,0.00054398115,0.00071547145,0.000003281944,0.000013889399,0.00014982374],"genre_scores_gemma":[0.25143033,0.0007146675,0.74702704,0.0005489341,0.000047109384,0.00013259938,7.202108e-7,0.00002103382,0.00007757022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99373305,0.0046921405,0.00077915855,0.0003918586,0.00010328267,0.00030052368],"domain_scores_gemma":[0.99748605,0.0016906662,0.00014758886,0.0005436827,0.00009047569,0.000041522795],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0134289265,0.00017771834,0.00075995125,0.00021645117,0.000021496766,0.0000023573277,0.0001930583,0.0001640757,0.000036077774],"category_scores_gemma":[0.005269534,0.00009001036,0.00024735645,0.00051046227,0.00048129258,0.0000191995,0.00019474073,0.00022281881,0.0000022143986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011644264,0.000080370795,0.003069876,0.000022288443,0.00013375763,0.000007678306,0.00019261462,8.347362e-7,0.682942,0.00006994952,0.0000059817985,0.31231025],"study_design_scores_gemma":[0.002191742,0.0006914035,0.032346655,0.0002290741,0.00004447744,0.000013437687,0.00009356057,0.00001529821,0.9603625,0.0020769956,0.0018159696,0.0001189112],"about_ca_topic_score_codex":0.00015470068,"about_ca_topic_score_gemma":0.000034484783,"teacher_disagreement_score":0.4109942,"about_ca_system_score_codex":0.0001341159,"about_ca_system_score_gemma":0.00010818291,"threshold_uncertainty_score":0.6308505},"labels":[],"label_agreement":null},{"id":"W2514677574","doi":"10.1007/978-1-4939-3792-9_11","title":"Metabolic Labeling in the Study of Mammalian Ribosomal RNA Synthesis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Ribosomal RNA; RNA polymerase I; Transcription (linguistics); RNA; Biology; 5S ribosomal RNA; 5.8S ribosomal RNA; Gene; Molecular biology; RNA polymerase; 18S ribosomal RNA; RNA-dependent RNA polymerase; Genetics","score_opus":0.028424382644601384,"score_gpt":0.38040897639272286,"score_spread":0.35198459374812147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2514677574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8506069,0.0012043018,0.14727692,0.00024698576,0.000074382435,0.00027449435,0.0000081600465,0.0000030487936,0.00030481338],"genre_scores_gemma":[0.9305267,0.00017649485,0.068908595,0.00012077943,0.000035925386,0.00017802403,0.0000030948943,0.000014419811,0.000035987723],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971056,0.0018464191,0.00037889235,0.00036108075,0.00006912584,0.00023886428],"domain_scores_gemma":[0.9991341,0.00011902237,0.00009512286,0.00058578775,0.000043090295,0.000022840446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016166064,0.0001346107,0.00023841858,0.00011865673,0.000026414415,0.000005324863,0.00043845293,0.00014595546,0.000017582044],"category_scores_gemma":[0.00055011816,0.00008037613,0.00007322114,0.00024092603,0.00010438805,0.0000020557034,0.00009101356,0.00008216232,0.0000015812271],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031485357,0.00019399547,0.011723762,0.0000028750276,0.000035248442,0.000004225851,0.00008991305,0.000020180374,0.93648547,0.0010629551,0.0000044335397,0.050345458],"study_design_scores_gemma":[0.000835763,0.00030825057,0.01417118,0.000013366428,0.00003778405,0.0000060595157,0.00051137427,0.00001409736,0.97940516,0.00084385474,0.003676959,0.00017611939],"about_ca_topic_score_codex":0.00015993486,"about_ca_topic_score_gemma":0.0001945116,"teacher_disagreement_score":0.07991979,"about_ca_system_score_codex":0.000010521372,"about_ca_system_score_gemma":0.00003500723,"threshold_uncertainty_score":0.32776436},"labels":[],"label_agreement":null},{"id":"W2515385119","doi":"10.1007/978-1-4939-3795-0_16","title":"Quantitative Microinjection of Morpholino Antisense Oligonucleotides into Mouse Oocytes to Examine Gene Function in Meiosis-I","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research; Fondation Jean-Louis Lévesque","keywords":"Microinjection; Morpholino; RNA interference; Germinal vesicle; Oocyte; Biology; Conditional gene knockout; Meiosis; Cell biology; Gene; Oligonucleotide; Function (biology); Genetics; Molecular biology; RNA; Embryo; Gene knockdown","score_opus":0.01566514391253097,"score_gpt":0.40141368913158226,"score_spread":0.3857485452190513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2515385119","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50528026,0.0006283741,0.49378622,0.00005052418,0.00009955259,0.00012164657,0.000005962953,0.0000059495596,0.000021551328],"genre_scores_gemma":[0.5374667,0.0001781498,0.46214485,0.000082847415,0.000025268262,0.000025575284,0.000014695243,0.000021956117,0.00003993671],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833995,0.000462468,0.0004005125,0.00046861157,0.000050286013,0.00027818762],"domain_scores_gemma":[0.99937195,0.00008161082,0.00007836383,0.00033771028,0.000072633404,0.000057762252],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007180639,0.00019177525,0.000294699,0.00030717364,0.000016717348,0.0000041670532,0.00014468122,0.00020882445,0.000007845984],"category_scores_gemma":[0.0005981374,0.00016356217,0.000079871614,0.00027453256,0.00009098263,0.0000034227,0.00012677522,0.000074896,0.0000037193365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002252915,0.0000510025,0.004668046,0.000017126154,0.0000335533,0.000004933282,0.00006350134,0.0007060259,0.9833782,0.00024292487,0.000011589826,0.0105978055],"study_design_scores_gemma":[0.0006189314,0.0007693039,0.0052578337,0.000026825846,0.000011237311,0.000010721279,0.000055851015,0.00007657156,0.99189025,0.0005346091,0.0005434925,0.0002043419],"about_ca_topic_score_codex":0.00016925627,"about_ca_topic_score_gemma":0.00015538203,"teacher_disagreement_score":0.0321865,"about_ca_system_score_codex":0.000032222102,"about_ca_system_score_gemma":0.00003221642,"threshold_uncertainty_score":0.6669872},"labels":[],"label_agreement":null},{"id":"W2516001534","doi":"10.1007/978-1-4939-3801-8_3","title":"Quantitative Analysis of Human Cancer Cell Extravasation Using Intravital Imaging","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institutes of Health","keywords":"Intravasation; Extravasation; Metastasis; Chorioallantoic membrane; In vivo; Cancer cell; Cancer; Ex vivo; Biology; In ovo; Embryonic stem cell; Embryo; Cancer research; Cell biology; Immunology; Genetics","score_opus":0.04458364918458804,"score_gpt":0.4955903460678417,"score_spread":0.4510066968832537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516001534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5469001,0.0016091348,0.45118833,0.000019145868,0.000028965273,0.00008067415,0.00004171597,0.0000021696128,0.00012980003],"genre_scores_gemma":[0.8411337,0.00019663393,0.1584901,0.000033055465,0.000015555472,0.000028745002,0.000057537545,0.000013667323,0.000030967367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854374,0.00055401074,0.00023945331,0.00035375377,0.000062579966,0.00024647388],"domain_scores_gemma":[0.9994711,0.00004262702,0.000113202484,0.00024912972,0.000078677556,0.000045261797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041792754,0.00012198925,0.0002476383,0.00019797291,0.000030766165,0.0000047353137,0.00013397285,0.00008781821,0.000062227096],"category_scores_gemma":[0.0000891777,0.00009354865,0.00013458682,0.00028883922,0.00016156616,0.0000041430167,0.00008409722,0.000041737516,3.8169827e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005560779,0.00005105317,0.04282794,0.000005494033,0.00034081508,0.0000046102555,0.00003252528,0.00005069116,0.9424935,0.00034043143,0.0000025709658,0.013794745],"study_design_scores_gemma":[0.00060295686,0.00021308303,0.0048535266,0.000010931928,0.00015569793,9.813543e-7,0.000045715253,0.00032249923,0.9929713,0.00061713724,0.00008255608,0.0001236242],"about_ca_topic_score_codex":0.0021058936,"about_ca_topic_score_gemma":0.00094610243,"teacher_disagreement_score":0.29423368,"about_ca_system_score_codex":0.00007359386,"about_ca_system_score_gemma":0.00006182524,"threshold_uncertainty_score":0.38148034},"labels":[],"label_agreement":null},{"id":"W2516069582","doi":"10.1007/978-1-4939-3801-8_14","title":"Analysis of Extracellular Vesicles in the Tumor Microenvironment","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"Prostate Cancer Canada; Movember Foundation","keywords":"Extracellular vesicles; Microvesicles; Extracellular; Vesicle; Tumor microenvironment; Cell biology; Differential centrifugation; Intracellular; Chemistry; Biology; Tumor cells; Biophysics; Biochemistry; Membrane; Cancer research","score_opus":0.013086083646738701,"score_gpt":0.3333508186124446,"score_spread":0.3202647349657059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2516069582","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62277806,0.0042320844,0.37247068,0.00017635993,0.000037602404,0.00017756344,0.000018698685,0.0000030314231,0.00010591318],"genre_scores_gemma":[0.85551715,0.00017229009,0.1437812,0.0003256703,0.000023323015,0.00006218416,0.00003720877,0.000021851742,0.000059110924],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964311,0.0020342579,0.0005308365,0.0005400444,0.000106173335,0.00035760275],"domain_scores_gemma":[0.99869275,0.00016594381,0.00017119177,0.0009008311,0.000020534064,0.000048752616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020500838,0.00020163269,0.00035637186,0.0002913669,0.000019932326,0.000005570167,0.0006151423,0.00016414754,0.00004827702],"category_scores_gemma":[0.00043180297,0.00013132727,0.00025925302,0.0005248257,0.00036004302,0.0000026498676,0.00017716883,0.000104222876,0.0000034202824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055879882,0.00016616257,0.044333484,0.0000073820456,0.00016424964,0.000043346976,0.00005144909,0.00009883027,0.94471484,0.00086646655,0.000009999543,0.009487897],"study_design_scores_gemma":[0.00060388685,0.00014872696,0.021060012,0.0000135171085,0.00017370713,0.0000075782045,0.00008142989,0.00008219914,0.97163105,0.001576438,0.0044107656,0.0002106602],"about_ca_topic_score_codex":0.000021024327,"about_ca_topic_score_gemma":0.000032882675,"teacher_disagreement_score":0.2327391,"about_ca_system_score_codex":0.0000281941,"about_ca_system_score_gemma":0.000033069726,"threshold_uncertainty_score":0.53553706},"labels":[],"label_agreement":null},{"id":"W2517954099","doi":"10.1007/978-1-4939-3801-8_9","title":"Detecting Secreted Analytes from Immune Cells: An Overview of Technologies","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Leukemia and Lymphoma Society of Canada; Cancer Research Institute","keywords":"Immune system; Analyte; Flow cytometry; Tumor microenvironment; Biology; Population; Cell biology; Intracellular; Computational biology; Immunology; Chemistry; Medicine; Chromatography","score_opus":0.03589386779652133,"score_gpt":0.35741346667582546,"score_spread":0.32151959887930415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2517954099","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25619352,0.004517549,0.7387974,0.00003309155,0.00013847926,0.000051668878,0.000009495042,0.00019446872,0.00006432993],"genre_scores_gemma":[0.59762096,0.0006530543,0.40168148,0.00000801037,0.000009845759,0.0000055657247,0.0000018000914,0.000015974983,0.0000033226897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989659,0.00029601538,0.00029903345,0.00020711731,0.000034625486,0.00019727631],"domain_scores_gemma":[0.9993902,0.0002235727,0.000046862406,0.00029673788,0.000022421746,0.00002024324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004058286,0.0001249474,0.000303858,0.00013374556,0.000012654563,0.0000041890808,0.00016396458,0.00026144378,0.000030296578],"category_scores_gemma":[0.00027728218,0.00008871035,0.00007945238,0.00030121932,0.00009689027,0.000027765047,0.000052016167,0.00013529242,0.0000028686334],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003369682,0.0000051054612,0.0001300593,0.000011292413,0.000025925157,0.000003032068,0.000007486753,0.00006342708,0.79698867,0.00030048817,2.4699145e-7,0.20246087],"study_design_scores_gemma":[0.00015000645,0.00007235945,0.00031863307,0.000045930807,0.000015199445,0.0000012659738,0.000046291727,0.008455759,0.975607,0.014952893,0.00021084976,0.00012385451],"about_ca_topic_score_codex":0.00006553034,"about_ca_topic_score_gemma":0.00001437113,"teacher_disagreement_score":0.34142745,"about_ca_system_score_codex":0.00002592338,"about_ca_system_score_gemma":0.0000036070778,"threshold_uncertainty_score":0.3617503},"labels":[],"label_agreement":null},{"id":"W2518005235","doi":"10.1007/978-1-4939-3801-8_21","title":"Analysis of the Tumor Microenvironment Transcriptome via NanoString mRNA and miRNA Expression Profiling","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Fondation de l'Hôpital général juif; Conquer Cancer Foundation","keywords":"microRNA; Transcriptome; Profiling (computer programming); Gene expression profiling; Computational biology; Messenger RNA; Tumor microenvironment; Biology; Cancer research; Gene expression; Computer science; Gene; Tumor cells; Genetics","score_opus":0.01030015490663476,"score_gpt":0.32973977648330005,"score_spread":0.3194396215766653,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2518005235","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4512557,0.0006864783,0.5476196,0.0001440604,0.000027844786,0.000202402,0.000017705104,0.000005189811,0.00004104756],"genre_scores_gemma":[0.6961794,0.00020360702,0.30318502,0.0002488567,0.000011403448,0.00009722992,0.000020849311,0.000016201888,0.00003744171],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982373,0.00061536895,0.00034973552,0.0004988779,0.00005341859,0.00024528021],"domain_scores_gemma":[0.99915993,0.00003740601,0.00015443747,0.000580191,0.000023583787,0.00004443212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055322255,0.00017248081,0.00028797446,0.00013733865,0.000049508428,0.000003406309,0.00030959692,0.00020380261,0.000013998834],"category_scores_gemma":[0.000091795235,0.00010572528,0.00019442562,0.00028216428,0.0003119176,0.0000017940735,0.00024076356,0.00009172597,3.322197e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021597269,0.000034483644,0.02247099,0.0000062694457,0.000113242735,0.0000011196194,0.00000968024,0.0000086939335,0.97063214,0.00028981225,0.0000038903686,0.0064081093],"study_design_scores_gemma":[0.00026847614,0.00008656677,0.0052697747,0.000018373026,0.00010711111,0.000008251208,0.000007765029,0.000039712668,0.99125683,0.00061731564,0.002180097,0.00013972497],"about_ca_topic_score_codex":0.000012683842,"about_ca_topic_score_gemma":0.0000069319494,"teacher_disagreement_score":0.24492368,"about_ca_system_score_codex":0.00001588067,"about_ca_system_score_gemma":0.000017723421,"threshold_uncertainty_score":0.43113518},"labels":[],"label_agreement":null},{"id":"W2518591567","doi":"10.1007/978-1-4939-3801-8_7","title":"Hydroxylation-Dependent Interaction of Substrates to the Von Hippel-Lindau Tumor Suppressor Protein (VHL)","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Hydroxylation; Ubiquitin ligase; Suppressor; Ubiquitin; Chemistry; Ubiquitin-Protein Ligases; Enzyme; Hypoxia-inducible factors; Biochemistry; Proteasome; HEK 293 cells; In vitro; Cell biology; Cancer research; Biology; Receptor; Gene","score_opus":0.01608579606653703,"score_gpt":0.3493773640967179,"score_spread":0.33329156803018084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2518591567","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6507991,0.0010104835,0.34598628,0.0006278284,0.0007534399,0.0005369626,0.000032038657,0.000009068315,0.00024480937],"genre_scores_gemma":[0.92110795,0.00009326998,0.077113725,0.0003753575,0.0005100285,0.00025292844,0.00003268223,0.000037182937,0.00047685247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977778,0.0009066928,0.00041752463,0.00047755626,0.00009599381,0.0003244006],"domain_scores_gemma":[0.9990174,0.00007529008,0.0001763882,0.0005500551,0.000112623886,0.00006823147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010824356,0.00019919337,0.00027905699,0.00011735798,0.00003847363,0.000011041844,0.00035373194,0.00018490995,0.000043510692],"category_scores_gemma":[0.0007223738,0.00012740104,0.0001269369,0.00015353385,0.00012359067,0.0000055661476,0.0001673497,0.00012468586,0.000009525237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018125045,0.000044421042,0.00037814977,0.000009955523,0.000040097795,0.0000012420418,0.000056272693,0.000054269112,0.97778255,0.00074766466,0.000064938635,0.020639183],"study_design_scores_gemma":[0.00055207324,0.00023465307,0.0005472737,0.000028548888,0.00001698018,0.000013581844,0.000052559597,0.00002094591,0.9490789,0.0012968055,0.047986705,0.00017093596],"about_ca_topic_score_codex":0.0000909196,"about_ca_topic_score_gemma":0.00011690486,"teacher_disagreement_score":0.27030888,"about_ca_system_score_codex":0.00002552958,"about_ca_system_score_gemma":0.00007720806,"threshold_uncertainty_score":0.51952636},"labels":[],"label_agreement":null},{"id":"W2521519758","doi":"10.1007/978-1-4939-6361-4_11","title":"Characterization of Functional Prophages in Clostridium difficile","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Prophage; Biology; Transduction (biophysics); Genome; Clostridium difficile; Horizontal gene transfer; Circular bacterial chromosome; Microbiology; Lysogen; Genetics; Gene; Lysogenic cycle; Computational biology; Bacteriophage; Antibiotics; Escherichia coli","score_opus":0.014629129260735872,"score_gpt":0.3211766433875016,"score_spread":0.30654751412676573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2521519758","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6146516,0.0000070038714,0.3845801,0.00020001238,0.00013915867,0.00008349946,0.000008719275,0.00000468797,0.0003251724],"genre_scores_gemma":[0.9069867,0.000025850475,0.09239365,0.00011692334,0.000016968288,0.00003029751,0.00001577881,0.000009611918,0.00040422098],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991183,0.0003139648,0.00021113743,0.00019136962,0.000028316765,0.00013689724],"domain_scores_gemma":[0.99973387,0.00005691163,0.000069276924,0.00011734158,0.000005359054,0.000017231814],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027021076,0.00006993664,0.00012399167,0.00006526647,0.000010733109,0.0000022265347,0.00008085137,0.000079951125,0.0015359673],"category_scores_gemma":[0.00008304462,0.000049905353,0.00003322371,0.0001600595,0.00011316863,0.000047743124,0.00008458563,0.00006117639,0.000030038347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017645185,0.000057574507,0.0033152252,0.000001820616,0.0000023236455,0.0000026153862,0.000019885121,0.0000060796083,0.9705157,0.00014217707,0.000004330596,0.02591458],"study_design_scores_gemma":[0.0002092634,0.00004445766,0.097345315,0.000010727025,0.000001831979,0.0000041379294,0.0000031333084,0.0000152122675,0.90000516,0.00038085235,0.0019214002,0.000058478796],"about_ca_topic_score_codex":0.00007167218,"about_ca_topic_score_gemma":0.000029613624,"teacher_disagreement_score":0.29233506,"about_ca_system_score_codex":0.00006807537,"about_ca_system_score_gemma":0.0000064198066,"threshold_uncertainty_score":0.9993768},"labels":[],"label_agreement":null},{"id":"W2521718208","doi":"10.1007/978-1-4939-3804-9_6","title":"Following the Time-Course of Post-pollination Events by Transmission Electron Microscopy (TEM): Buildup of Exosome-Like Structures with Compatible Pollinations","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pollen; Vacuole; Cell biology; Biology; Organelle; Ultrastructure; Botany; Transmission electron microscopy; Cytoplasm; Nanotechnology; Materials science","score_opus":0.006262530711079383,"score_gpt":0.34610401939927943,"score_spread":0.3398414886882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2521718208","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6078412,0.0016392579,0.38962018,0.0004145194,0.00007410627,0.0002842064,0.00009187221,0.0000055396595,0.000029116149],"genre_scores_gemma":[0.82001126,0.00013922762,0.17923409,0.00012178046,0.00002718186,0.00003312347,0.00027473512,0.000028804614,0.00012979876],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997487,0.0012057004,0.000398501,0.00050589064,0.00009444839,0.0003084283],"domain_scores_gemma":[0.9989475,0.00013933235,0.00026322677,0.00045267722,0.00015741358,0.000039869163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085097697,0.00022216185,0.00038014294,0.00011089698,0.000048541446,0.000002464103,0.00036258128,0.00027614686,0.000010811049],"category_scores_gemma":[0.00020059496,0.00012569554,0.00013101836,0.0002142839,0.0002673619,0.0000055338573,0.0000673688,0.00011340933,6.19574e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025677698,0.000100811725,0.0035665655,0.000011675501,0.00013507201,8.528993e-7,0.00003874824,0.0000152937,0.989368,0.0002619554,0.00004641937,0.006197811],"study_design_scores_gemma":[0.0008489325,0.0008840598,0.0029029658,0.000029587454,0.00003922591,0.000014290913,0.000016542957,0.000015909887,0.9915789,0.0015134694,0.0019916678,0.00016446157],"about_ca_topic_score_codex":0.000041929452,"about_ca_topic_score_gemma":0.00001065475,"teacher_disagreement_score":0.21217006,"about_ca_system_score_codex":0.000024275887,"about_ca_system_score_gemma":0.000111563524,"threshold_uncertainty_score":0.5125715},"labels":[],"label_agreement":null},{"id":"W2522325651","doi":"10.1007/978-1-4939-6433-8_15","title":"Exploring Alternative RNA Structure Sets Using MC-Flashfold and db2cm","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Terminator (solar); RNA; Base pair; Sequence (biology); Biology; Computational biology; Nucleic acid secondary structure; Genetics; Population; Transcription (linguistics); Nucleic acid structure; Computer science; Physics; Gene","score_opus":0.07987637895532561,"score_gpt":0.38019713672612304,"score_spread":0.3003207577707974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2522325651","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51063013,0.0005972711,0.48823437,0.00008315894,0.00021655406,0.00012714845,0.000015366677,0.000007165281,0.00008884793],"genre_scores_gemma":[0.41046232,0.00035626334,0.58877224,0.0001953046,0.000098190234,0.00003471247,0.0000070461483,0.00003466414,0.00003922347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776196,0.00095069245,0.00025718723,0.00059552264,0.00006528973,0.00036936955],"domain_scores_gemma":[0.9993067,0.00007800231,0.00010627694,0.00038445683,0.000042299693,0.00008228246],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006193823,0.00023965591,0.00027478058,0.00011711908,0.00005122679,0.000012782436,0.00023317988,0.00024964605,0.000028778937],"category_scores_gemma":[0.00041903584,0.00017640255,0.00007075145,0.00007741342,0.0001330495,0.000007844464,0.00024609006,0.00009333633,0.0000015803726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004115097,0.000008336524,0.00041102894,0.0000071792692,0.00004275795,0.0000128778,0.000036704325,0.000010596192,0.91118,0.0010417042,0.0000021989183,0.087205425],"study_design_scores_gemma":[0.00045884802,0.00015842628,0.00012565628,0.000035502686,0.000013039371,0.00003515707,0.000021941907,0.000038030983,0.98290265,0.013943873,0.002009798,0.00025709483],"about_ca_topic_score_codex":0.000029503299,"about_ca_topic_score_gemma":0.000010879692,"teacher_disagreement_score":0.100537874,"about_ca_system_score_codex":0.000023733348,"about_ca_system_score_gemma":0.00003111989,"threshold_uncertainty_score":0.7193487},"labels":[],"label_agreement":null},{"id":"W2523116569","doi":"10.1007/978-1-4939-6361-4_19","title":"A Practical Method for Preparation of Fecal Microbiota Transplantation","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton; Kingston General Hospital; Queen's University","funders":"","keywords":"Fecal bacteriotherapy; Clostridium difficile; Feces; Medicine; Transplantation; Antibiotics; C difficile; Microbiology; Biology; Internal medicine","score_opus":0.05786871290153519,"score_gpt":0.5152873457300653,"score_spread":0.4574186328285301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2523116569","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12041774,0.00008487973,0.87658757,0.0020144586,0.000059671842,0.00056394713,0.000029676623,0.000011580064,0.0002304488],"genre_scores_gemma":[0.030111812,0.00009951233,0.9694168,0.000092622824,0.000037093294,0.00008563089,0.000032857086,0.000015266027,0.00010840782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984378,0.0005671355,0.00035671683,0.00031324895,0.00007638019,0.0002487195],"domain_scores_gemma":[0.9984002,0.0011192802,0.000075838645,0.00022320694,0.00012382299,0.00005764109],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014968109,0.00010753906,0.00032871732,0.00017896612,0.00001592755,0.0000028408947,0.00006109639,0.00021888652,0.00005000492],"category_scores_gemma":[0.0013315284,0.00007403687,0.0001273702,0.0001830134,0.00009329294,0.000019419376,0.000021642052,0.0001085717,0.0000029331363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013880307,0.00013403465,0.0002776568,0.00009722129,0.000041780197,0.000015203773,0.00004517671,0.000001112336,0.95908177,0.003737036,0.000055832952,0.035125125],"study_design_scores_gemma":[0.0021113998,0.00086447486,0.00021477832,0.000052725878,0.00007144525,0.00011202035,0.000014336061,0.0003476165,0.9931201,0.001022398,0.0019855306,0.00008320057],"about_ca_topic_score_codex":0.000024586718,"about_ca_topic_score_gemma":0.0000064989563,"teacher_disagreement_score":0.0928292,"about_ca_system_score_codex":0.000062859646,"about_ca_system_score_gemma":0.00015243368,"threshold_uncertainty_score":0.30191362},"labels":[],"label_agreement":null},{"id":"W2527686340","doi":"10.1007/978-1-4939-6451-2_15","title":"LOV2-Controlled Photoactivation of Protein Trans-Splicing","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"RNA splicing; splice; Chemistry; Peptide; Computational biology; Alternative splicing; Cell biology; Nanotechnology; Biophysics; Biology; Biochemistry; Materials science; Gene; Exon; RNA","score_opus":0.015683588434417632,"score_gpt":0.33895845776630756,"score_spread":0.3232748693318899,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2527686340","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26320058,0.0003519434,0.7351376,0.00018817464,0.00006503499,0.0005458178,0.0000051461543,0.0000073090773,0.00049838255],"genre_scores_gemma":[0.5651749,0.00005360123,0.43407598,0.000108232416,0.000040905386,0.00022349143,0.000007007331,0.000025961854,0.00028990273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975642,0.0012477273,0.00043054568,0.00041107123,0.00006998328,0.00027650062],"domain_scores_gemma":[0.99921757,0.00009664424,0.00017941714,0.00040151138,0.00006209184,0.000042779477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014577286,0.00018241804,0.00040775895,0.00012633322,0.00002226315,0.0000037231325,0.00023041217,0.0003157094,0.00005167185],"category_scores_gemma":[0.0007083683,0.00012665115,0.00016908585,0.00012238654,0.00009914841,0.0000029835908,0.000051379277,0.000061877225,0.0000018455787],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047248512,0.00004176253,0.00016536648,0.000015406833,0.000051053034,0.0000019375987,0.000016622442,0.000002802279,0.9386859,0.002615285,0.0000015031383,0.05792989],"study_design_scores_gemma":[0.0023788621,0.0003439092,0.000058131525,0.000050681385,0.000012480358,0.000003963036,0.000009819091,0.000010554758,0.9871555,0.008208703,0.0015981226,0.00016924753],"about_ca_topic_score_codex":0.000021510723,"about_ca_topic_score_gemma":0.000006011159,"teacher_disagreement_score":0.3019743,"about_ca_system_score_codex":0.000015539157,"about_ca_system_score_gemma":0.000048277416,"threshold_uncertainty_score":0.5164684},"labels":[],"label_agreement":null},{"id":"W2528366461","doi":"10.1007/978-1-4939-6472-7_9","title":"Insertion of Group II Intron-Based Ribozyme Switches into Homing Endonuclease Genes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Homing endonuclease; Ribozyme; Mammalian CPEB3 ribozyme; Group I catalytic intron; Intron; Endonuclease; Homing (biology); Gene; Group II intron; VS ribozyme; Genetics; Biology; RNA; RNA splicing","score_opus":0.013841351046047104,"score_gpt":0.3232023619906135,"score_spread":0.30936101094456636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528366461","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40333608,0.0011002378,0.5950199,0.00019822057,0.00011946546,0.0001568108,0.000005364884,0.000009954869,0.00005396321],"genre_scores_gemma":[0.54499763,0.00009202446,0.45450732,0.0002087723,0.000056210058,0.000067464964,0.000018253382,0.000027023374,0.00002527686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976227,0.0010126005,0.0004289611,0.00052640657,0.00007911154,0.0003301707],"domain_scores_gemma":[0.9990342,0.00010958715,0.00018981891,0.00053026876,0.000063055035,0.000073051095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012512774,0.00023231741,0.00034294094,0.00016244718,0.00006096494,0.0000051816232,0.000331323,0.00037248957,0.00004178744],"category_scores_gemma":[0.00071835134,0.00017634167,0.00016299248,0.00013499743,0.00017955586,0.0000040626105,0.00020148288,0.00007113518,0.0000030579122],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000175244,0.000067098634,0.0014846604,0.000019481799,0.000032649772,0.000003340002,0.000018236766,0.000008934204,0.84047836,0.0012137508,0.0000045170127,0.15649375],"study_design_scores_gemma":[0.0008027719,0.0006562187,0.00022484362,0.00004081881,0.00001725614,0.000004232742,0.000016649481,0.000033058946,0.98564154,0.006675574,0.0056516677,0.00023534495],"about_ca_topic_score_codex":0.000068117064,"about_ca_topic_score_gemma":0.000026893727,"teacher_disagreement_score":0.1562584,"about_ca_system_score_codex":0.000032263513,"about_ca_system_score_gemma":0.00006229899,"threshold_uncertainty_score":0.7191004},"labels":[],"label_agreement":null},{"id":"W2528401552","doi":"10.1007/978-1-4939-6445-1_22","title":"Screening Vaccine Formulations in Fresh Human Whole Blood","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Adjuvant; Human blood; Human use; Whole blood; Animal model; Computer science; Computational biology; Medicine; Biochemical engineering; Biology; Biotechnology; Immunology; Engineering; Physiology","score_opus":0.020754651406155546,"score_gpt":0.3653431810429386,"score_spread":0.34458852963678305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528401552","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4751113,0.001124051,0.52227,0.0005198562,0.00014133505,0.00018564987,0.0000046170185,0.00003281177,0.0006103208],"genre_scores_gemma":[0.76123846,0.000050108756,0.23704092,0.00026579146,0.000025803985,0.00009925138,0.00012591027,0.000031459575,0.0011223025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970543,0.0017825565,0.00046942124,0.00029395614,0.000014436938,0.00038536385],"domain_scores_gemma":[0.9991709,0.00035810666,0.00010511334,0.00032379924,0.000030519084,0.000011573608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013148728,0.00015145246,0.00029971145,0.00042842864,0.00007464605,0.000004666825,0.00020757601,0.00037142445,0.00030437481],"category_scores_gemma":[0.0004659809,0.00011375171,0.000075740216,0.00023933862,0.00007752365,0.00006683991,0.00011029502,0.00021555903,0.000057413825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060658385,0.000048205176,0.0099453,0.0000029566615,0.000042610263,0.000009596679,0.0000720765,0.000005569809,0.94384956,0.012921774,0.000023023737,0.03301869],"study_design_scores_gemma":[0.0028787174,0.0001692026,0.01961016,0.000052651816,0.000017543742,0.000025976404,0.000027370781,0.0000071393706,0.9538969,0.011984293,0.011147496,0.00018256585],"about_ca_topic_score_codex":0.00009378939,"about_ca_topic_score_gemma":0.00008965648,"teacher_disagreement_score":0.28612715,"about_ca_system_score_codex":0.000028129078,"about_ca_system_score_gemma":0.000022204074,"threshold_uncertainty_score":0.46386603},"labels":[],"label_agreement":null},{"id":"W2528435521","doi":"10.1007/978-1-4939-6451-2_13","title":"Conditional Toxin Splicing Using a Split Intein System","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Toxin Mechanisms and Immunotoxins","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Intein; RNA splicing; Protein splicing; Toxin; Chemistry; Protein engineering; FKBP; Computational biology; Biology; Biochemistry; Gene; RNA","score_opus":0.023879523405393874,"score_gpt":0.3521660983583079,"score_spread":0.328286574952914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2528435521","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14997107,0.0010697447,0.8471966,0.00011439107,0.0008499922,0.00022846585,0.000039934635,0.000072648116,0.00045714754],"genre_scores_gemma":[0.46159527,0.000015107874,0.53745544,0.00029812008,0.000035868827,0.000055458768,0.000036435194,0.000038172,0.0004701537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965356,0.0018606617,0.0005065096,0.0005124016,0.000025461393,0.0005593531],"domain_scores_gemma":[0.99901485,0.00033726267,0.00015568119,0.00041503058,0.00005115088,0.000026042924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013652261,0.0002488359,0.00047139023,0.00027800055,0.000099334975,0.000008549083,0.00032311294,0.0004970229,0.00047647898],"category_scores_gemma":[0.00030842112,0.0001798869,0.00014142344,0.00019240564,0.00026095635,0.000048242844,0.00019724524,0.00026448214,0.0001644503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004599872,0.000031295163,0.00023588218,0.00001157403,0.000069272995,0.000019609806,0.000036419653,0.000004419093,0.85696447,0.12956935,0.0000116339515,0.01300005],"study_design_scores_gemma":[0.0013719018,0.0001612163,0.00023386441,0.00013863273,0.000024286437,0.00022470421,0.00014629576,0.00004984452,0.98274523,0.008993532,0.005628519,0.00028195992],"about_ca_topic_score_codex":0.00010738881,"about_ca_topic_score_gemma":0.0000064181304,"teacher_disagreement_score":0.3116242,"about_ca_system_score_codex":0.00019870099,"about_ca_system_score_gemma":0.00006447938,"threshold_uncertainty_score":0.7335575},"labels":[],"label_agreement":null},{"id":"W2529029605","doi":"10.1007/978-1-4939-6445-1_16","title":"Stressed Stability Techniques for Adjuvant Formulations","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Crystallization and Solubility Studies","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sanofi (Canada)","funders":"","keywords":"Adjuvant; Robustness (evolution); Stability (learning theory); Degradation (telecommunications); Selection (genetic algorithm); Computer science; Biochemical engineering; Reliability engineering; Engineering; Chemistry; Biology; Artificial intelligence; Immunology; Machine learning","score_opus":0.05896708265679243,"score_gpt":0.4377392681407134,"score_spread":0.378772185483921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529029605","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050711107,0.000082701576,0.94764996,0.0006462414,0.000113073496,0.00041864233,0.000056939487,0.00007496337,0.00024635834],"genre_scores_gemma":[0.11798787,0.000012724067,0.88160545,0.00012748422,0.000014063072,0.00019565999,0.000005878303,0.000008017794,0.000042844906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862134,0.00054298795,0.00027976322,0.0003006894,0.000040084462,0.00021515833],"domain_scores_gemma":[0.9989355,0.00060181995,0.000061009065,0.00027440014,0.000099775985,0.000027474836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014972211,0.000092488925,0.00021474749,0.000061970175,0.000059083737,0.00000828121,0.00013904044,0.00009279303,0.00021797162],"category_scores_gemma":[0.0017784773,0.00006078493,0.000058290607,0.000093295756,0.00016972065,0.000035779405,0.00008269261,0.000027622156,0.0000021927076],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018046901,0.00003171438,0.0016653178,0.000010768006,0.0000027538113,2.7397232e-7,0.00007126094,0.0000010068801,0.96034914,0.014945641,0.0000097118445,0.022894377],"study_design_scores_gemma":[0.00025316485,0.00007742575,0.0006291107,0.000009663157,0.0000045952274,4.1174042e-7,0.00003284957,0.00006685208,0.9162283,0.07373602,0.008861965,0.0000996729],"about_ca_topic_score_codex":0.000014309927,"about_ca_topic_score_gemma":0.00006138059,"teacher_disagreement_score":0.06727677,"about_ca_system_score_codex":0.00005187332,"about_ca_system_score_gemma":0.000026215013,"threshold_uncertainty_score":0.24787375},"labels":[],"label_agreement":null},{"id":"W2529834394","doi":"10.1007/978-1-4939-6451-2_12","title":"A Recessive Pollination Control System for Wheat Based on Intein-Mediated Protein Splicing","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung; Institute of Genetics; Bundesministerium für Bildung und Forschung","keywords":"Intein; Barnase; Biology; Transgene; Gene; RNA splicing; Genetics; Ribonuclease; RNA","score_opus":0.012645278676585728,"score_gpt":0.34253487531345755,"score_spread":0.32988959663687184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2529834394","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11317872,0.00024181198,0.8838609,0.0008575183,0.00028752032,0.0012244056,0.0001275327,0.000033307148,0.00018831932],"genre_scores_gemma":[0.71822846,0.0000095795285,0.27986482,0.0005313172,0.00018750402,0.0008265077,0.00019650429,0.000043861317,0.00011140942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963422,0.0017819644,0.00041005944,0.00093791273,0.000065691056,0.00046221493],"domain_scores_gemma":[0.9986314,0.00035179916,0.00021603217,0.0005506753,0.00018082587,0.00006923485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018195044,0.00027892095,0.00041238064,0.00022320512,0.000049499537,0.0000072235603,0.00028317544,0.0004927351,0.0000052584874],"category_scores_gemma":[0.0034282021,0.00019793921,0.00013347925,0.00015051258,0.0001618442,0.000002963536,0.00005824139,0.00011513145,0.000006651001],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00088115316,0.000051151095,0.0007700651,0.000032652664,0.00004734201,0.0000073611554,0.000005156867,0.00004557449,0.9838029,0.0018533283,0.000021989701,0.012481324],"study_design_scores_gemma":[0.002725035,0.0011947175,0.00017746593,0.000109581146,0.00001636811,0.00001253846,0.000015511965,0.0007100919,0.9886804,0.00059425883,0.0054848343,0.00027915573],"about_ca_topic_score_codex":0.00001766502,"about_ca_topic_score_gemma":0.00001246171,"teacher_disagreement_score":0.6050498,"about_ca_system_score_codex":0.000116949326,"about_ca_system_score_gemma":0.00009758622,"threshold_uncertainty_score":0.80717266},"labels":[],"label_agreement":null},{"id":"W2530855467","doi":"10.1007/978-1-4939-6430-7_34","title":"CCN2 in Skin Fibrosis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connective Tissue Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Transforming growth factor; Fibrosis; CTGF; Connective tissue; Regulator; Growth factor; Cytokine; Biology; Cancer research; Immunology; Medicine; Pathology; Cell biology; Internal medicine; Genetics; Gene; Receptor","score_opus":0.026851053031708837,"score_gpt":0.4244567009059649,"score_spread":0.39760564787425606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2530855467","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47930092,0.00092084,0.51792294,0.0004609152,0.00011629835,0.00025486757,0.000012999288,0.000010456305,0.0009997642],"genre_scores_gemma":[0.7276405,0.0001612063,0.27122822,0.00023157195,0.00008112849,0.0001437831,0.000023192459,0.00004658425,0.00044377754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968594,0.0015856256,0.0002965262,0.00064844935,0.00007659548,0.0005334536],"domain_scores_gemma":[0.9991214,0.0001771179,0.000050614595,0.0005219511,0.000051653773,0.00007722344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012783996,0.00019153906,0.00026180566,0.00025897485,0.000019457984,0.0000076262336,0.00037231087,0.00031866677,0.00011175908],"category_scores_gemma":[0.001495868,0.00014883108,0.00009640038,0.0002951309,0.0001911698,0.000002830086,0.00033092202,0.00014792658,0.000022460494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007274124,0.000040457053,0.03356084,0.0000057852894,0.000015397465,0.000016729788,0.000016759752,0.0000017653564,0.8911401,0.00085949304,0.000032555658,0.0742374],"study_design_scores_gemma":[0.000977924,0.0002776831,0.015270522,0.000019569437,0.0000024996648,0.000009714339,0.000014560267,0.000007356058,0.95929873,0.003992909,0.019897792,0.00023073677],"about_ca_topic_score_codex":0.00009957741,"about_ca_topic_score_gemma":0.00014811194,"teacher_disagreement_score":0.24833961,"about_ca_system_score_codex":0.00006170847,"about_ca_system_score_gemma":0.0000658611,"threshold_uncertainty_score":0.60691553},"labels":[],"label_agreement":null},{"id":"W2531372333","doi":"10.1007/978-1-4939-6430-7_35","title":"Studying the CCN Proteins in Fibrosis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connective Tissue Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Extracellular matrix; Matricellular protein; Fibrosis; CTGF; Cell biology; CYR61; Cell adhesion; Adhesion; Signal transduction; Chemistry; Extracellular; Cancer research; Cell; Growth factor; Biology; Medicine; Pathology; Biochemistry; Receptor","score_opus":0.045708819412897055,"score_gpt":0.42415419296028567,"score_spread":0.3784453735473886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2531372333","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5162245,0.0010046567,0.48047945,0.0010573351,0.000098191056,0.00063192047,0.000007675073,0.00000939278,0.00048691043],"genre_scores_gemma":[0.86571836,0.00009381169,0.13318808,0.00022543716,0.00007880276,0.00038656665,0.000008011336,0.00003723538,0.0002636754],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962955,0.002302189,0.00027418017,0.0005516621,0.00008945449,0.00048699632],"domain_scores_gemma":[0.99900633,0.00023873147,0.000056457993,0.0005956156,0.00005330892,0.000049562223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019903386,0.00017645666,0.00021634025,0.00015117931,0.000044236487,0.000011418569,0.00048573027,0.00021294554,0.000047193866],"category_scores_gemma":[0.0020312273,0.00010593054,0.00008303145,0.00029941642,0.0002347364,0.0000026805947,0.000430737,0.00018666551,0.000010601839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059317612,0.000039489896,0.03300044,0.0000051898332,0.00002065215,0.000010460556,0.000041701547,0.0000023604825,0.91308796,0.000703548,0.000014080545,0.05301482],"study_design_scores_gemma":[0.00084086513,0.00032815218,0.015084193,0.000023732906,0.0000036867518,0.000008416194,0.00005336704,0.000009182237,0.96735466,0.0033618005,0.012733467,0.00019851074],"about_ca_topic_score_codex":0.000112969494,"about_ca_topic_score_gemma":0.00018174713,"teacher_disagreement_score":0.3494939,"about_ca_system_score_codex":0.000053560354,"about_ca_system_score_gemma":0.00006705416,"threshold_uncertainty_score":0.43197224},"labels":[],"label_agreement":null},{"id":"W2531615533","doi":"10.1007/978-1-4939-6533-5_6","title":"Leucoplast Isolation and Subfractionation","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Analytical Chemistry and Chromatography","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Isolation (microbiology); Computer science; Biology; Microbiology","score_opus":0.013230613439881968,"score_gpt":0.35593720319919064,"score_spread":0.3427065897593087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2531615533","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14712118,0.000118618256,0.84581405,0.00025804745,0.000022655315,0.000013490672,0.0000031802556,0.000023265022,0.006625495],"genre_scores_gemma":[0.71621263,0.000056737623,0.2832846,0.00008525102,0.000039668583,0.000013456522,0.0000120548675,0.0000100272455,0.00028558038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994222,0.00007848574,0.00014077763,0.00020556693,0.000032060838,0.00012090521],"domain_scores_gemma":[0.9995569,0.00023260157,0.000042974705,0.00011412623,0.000019813751,0.00003361095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020596109,0.00007607467,0.00010336879,0.000044312543,0.000021159423,0.000004623454,0.00005264347,0.00016268504,0.0003789143],"category_scores_gemma":[0.0002589996,0.000056378998,0.00003450104,0.00008404641,0.00009950224,0.000028035527,0.000027848879,0.00007414881,0.000003616887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000103674665,0.000012202457,0.01444244,0.000011290852,0.000010403561,0.0000023405935,0.000006953805,5.206299e-7,0.96111786,0.0036597075,0.000005098431,0.02072084],"study_design_scores_gemma":[0.00033567665,0.000010203222,0.00056197244,0.000016717775,0.000008737469,0.0000131386905,0.000019554374,0.0002001206,0.9687617,0.026007514,0.0039586904,0.00010597725],"about_ca_topic_score_codex":0.0000043291107,"about_ca_topic_score_gemma":0.0000012394427,"teacher_disagreement_score":0.56909144,"about_ca_system_score_codex":0.000021077603,"about_ca_system_score_gemma":0.000008371352,"threshold_uncertainty_score":0.41488457},"labels":[],"label_agreement":null},{"id":"W2534415170","doi":"10.1007/978-1-4899-7708-3_6","title":"Analysis of Global Genome Methylation Using the Cytosine-Extension Assay","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"","keywords":"DNA methylation; Cytosine; Methylation; CpG site; DNA; Methylated DNA immunoprecipitation; Epigenomics; Biology; Illumina Methylation Assay; RNA-Directed DNA Methylation; Epigenetics of physical exercise; Molecular biology; Chromatin; Genome; Genetics; Gene; Gene expression","score_opus":0.05771743264614839,"score_gpt":0.4043848723390769,"score_spread":0.3466674396929285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2534415170","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6518396,0.0003433611,0.34685072,0.0006416642,0.00003780252,0.00012857762,0.00006543391,0.00001005539,0.00008275519],"genre_scores_gemma":[0.9192795,0.00004455793,0.08038405,0.00018895086,0.000024957797,0.000009542077,0.000055710527,0.0000010868174,0.000011613507],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99496096,0.0038516787,0.00032841758,0.00040403416,0.000117178424,0.0003377461],"domain_scores_gemma":[0.9986056,0.00093424646,0.00014634809,0.00016547898,0.00010306923,0.00004522954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031638502,0.00013617308,0.00037451304,0.00005986049,0.00006436754,0.000007455474,0.0004102686,0.00023757012,0.00008365617],"category_scores_gemma":[0.00088369806,0.000038805334,0.00020197655,0.0017553162,0.0002589447,0.000021720258,0.00019861455,0.000100175734,0.0000024772426],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027286438,0.000021050271,0.05663468,7.4048023e-7,0.00014994458,0.0000064837022,0.0000043094765,0.00005125447,0.9100814,0.000896386,6.156959e-7,0.03212588],"study_design_scores_gemma":[0.00029340188,0.00030210754,0.6156225,0.000015482985,0.0003545724,0.00002699412,0.00004139053,0.0026864177,0.3721945,0.0070369625,0.0010943096,0.0003313252],"about_ca_topic_score_codex":0.00024487372,"about_ca_topic_score_gemma":0.00024421595,"teacher_disagreement_score":0.55898786,"about_ca_system_score_codex":0.00006579842,"about_ca_system_score_gemma":0.000015939699,"threshold_uncertainty_score":0.18323584},"labels":[],"label_agreement":null},{"id":"W253477177","doi":"10.1007/978-1-4939-0320-7_14","title":"Histological Assessment of Angiogenesis in the Hypoxic Central Nervous System","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Angiogenesis; Central nervous system; Neuroscience; Medicine; Pathology; Biology; Internal medicine","score_opus":0.022133342889904623,"score_gpt":0.37380147792557294,"score_spread":0.3516681350356683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W253477177","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36550292,0.0020456477,0.6302662,0.00011846515,0.0002066477,0.00020313125,0.0000064503683,0.0000065372546,0.0016440145],"genre_scores_gemma":[0.7979839,0.00006159804,0.20139393,0.0003630879,0.00007279882,0.00007046081,0.000026946984,0.000014220524,0.000013078745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99619734,0.0024840655,0.00041947156,0.000424,0.000090112066,0.0003849836],"domain_scores_gemma":[0.9991736,0.00010973407,0.0001401789,0.00049879454,0.00003768793,0.00003999917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019189605,0.00018211026,0.0003559892,0.00009720811,0.000029773695,0.0000058716305,0.0004511205,0.0003021129,0.000008968678],"category_scores_gemma":[0.00017566691,0.00012947929,0.00020700968,0.00022162317,0.00016618009,0.0000012432173,0.0001161846,0.00010419594,6.652727e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026583617,0.00007833163,0.041863456,0.000030164174,0.000031908603,0.000009632292,0.000026605101,0.00032096662,0.93225545,0.010422342,0.000041446703,0.014893112],"study_design_scores_gemma":[0.0021138447,0.0017858497,0.34400985,0.00007789782,0.00012735956,0.00016075184,0.0005464922,0.0038570438,0.60707086,0.0018305607,0.037468147,0.0009513419],"about_ca_topic_score_codex":0.00008516328,"about_ca_topic_score_gemma":0.00003030639,"teacher_disagreement_score":0.43248096,"about_ca_system_score_codex":0.0000501255,"about_ca_system_score_gemma":0.00006051051,"threshold_uncertainty_score":0.52800125},"labels":[],"label_agreement":null},{"id":"W2535006683","doi":"10.1007/978-1-4899-7708-3_8","title":"Analysis of DNA Hydroxymethylation Using Colorimetric Assay","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Epigenetics; DNA methylation; 5-Hydroxymethylcytosine; Cytosine; DNA; Methylation; 5-Methylcytosine; Brassica rapa; Molecular biology; Chemistry; Biology; Biochemistry; Gene; Genetics; Gene expression","score_opus":0.027901786585386612,"score_gpt":0.3938407235533068,"score_spread":0.3659389369679202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2535006683","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4464806,0.00094744976,0.5521589,0.000017520368,0.0000795642,0.0000799002,0.000009827973,0.000003335861,0.0002228862],"genre_scores_gemma":[0.6531433,0.00013770183,0.34656003,0.000028974704,0.000027076858,0.000008398324,0.00004190252,0.000015137986,0.00003745215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99727803,0.0014735289,0.00046417347,0.00044413135,0.00008860109,0.00025154295],"domain_scores_gemma":[0.9989459,0.00021144585,0.00023534954,0.00043994948,0.00011639928,0.000050937357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021948486,0.00015748576,0.00037771263,0.0007957057,0.000024262732,0.000004493585,0.00019014679,0.0003276438,0.000029951236],"category_scores_gemma":[0.0012521284,0.00012461,0.00020969613,0.0013520669,0.000121838,0.0000027170058,0.00011100923,0.000057080935,9.325627e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025690219,0.000034930996,0.053537216,0.000003799934,0.00026134014,0.0000010144507,0.000009018817,0.0007148622,0.9173324,0.00041220227,5.8016803e-7,0.027666928],"study_design_scores_gemma":[0.0003636243,0.00017588776,0.009107306,0.0000056029617,0.00020585189,4.964449e-7,0.000005169904,0.0016724132,0.9856588,0.0016706472,0.0009648953,0.00016929595],"about_ca_topic_score_codex":0.00004805303,"about_ca_topic_score_gemma":0.000020221865,"teacher_disagreement_score":0.20666271,"about_ca_system_score_codex":0.00003519277,"about_ca_system_score_gemma":0.000051610572,"threshold_uncertainty_score":0.50814486},"labels":[],"label_agreement":null},{"id":"W2535147024","doi":"10.1007/978-1-4899-7708-3_15","title":"Small RNA Library Preparation and Illumina Sequencing in Plants","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates - Technology Futures","keywords":"Computational biology; Biology; DNA sequencing; Epigenetics; Small RNA; RNA; Transfer RNA; Genetics; Gene","score_opus":0.05902577092568717,"score_gpt":0.35303411314606326,"score_spread":0.2940083422203761,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2535147024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9897933,0.00053531374,0.0076698223,0.0008180792,0.000052380045,0.00023139468,0.000025794761,0.000031138712,0.00084275845],"genre_scores_gemma":[0.8815789,0.00043169264,0.117162004,0.00047167845,0.000047011963,0.00006100968,0.00006784181,0.0000029478829,0.00017688774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99712396,0.0017217105,0.00024714065,0.0004642938,0.000047205547,0.00039571518],"domain_scores_gemma":[0.99913794,0.00065091543,0.000054933407,0.00007923913,0.000010304159,0.0000666651],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009728567,0.00013879396,0.00023059483,0.00006827223,0.000034406363,0.000014222314,0.00024269758,0.00027261896,0.000060670944],"category_scores_gemma":[0.00034042212,0.000051431947,0.000035121135,0.00022930646,0.0001676168,0.000057884637,0.000207105,0.00014981508,0.0000075044777],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005174667,0.000010142501,0.022025716,0.0000022614115,0.0000048098145,0.00006810255,0.00002745136,6.1427113e-7,0.87296027,0.0004573709,0.000005948332,0.10438555],"study_design_scores_gemma":[0.00041382667,0.0004405784,0.03993855,0.00006385188,0.0000029383193,0.000086085034,0.00006299919,0.00014082239,0.9417642,0.013985498,0.0028034453,0.0002972425],"about_ca_topic_score_codex":0.000113256516,"about_ca_topic_score_gemma":0.00032175126,"teacher_disagreement_score":0.10949218,"about_ca_system_score_codex":0.000041113086,"about_ca_system_score_gemma":0.000023823784,"threshold_uncertainty_score":0.21026872},"labels":[],"label_agreement":null},{"id":"W25368323","doi":"10.1007/978-1-62703-071-7_8","title":"Exploring the Diagnostic Potential of Immune Biomarker Coexpression in Gulf War Illness","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fibromyalgia and Chronic Fatigue Syndrome Research","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute on Alcohol Abuse and Alcoholism","keywords":"Biomarker; Immune system; Gulf war; Medicine; Internal medicine; Multivariate statistics; Immunology; Psychology; Biology; Genetics; Statistics; Mathematics","score_opus":0.07279259495293063,"score_gpt":0.41039101626154156,"score_spread":0.33759842130861095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W25368323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.850012,0.0070876023,0.14168762,0.00031754674,0.0003976271,0.0003687062,0.0000019135223,0.000009732231,0.000117220436],"genre_scores_gemma":[0.93082565,0.0005377692,0.0684277,0.000010426319,0.000017960969,0.0001280267,0.000012657164,0.000020285446,0.000019502952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997063,0.00166314,0.0004202349,0.000208385,0.00014450635,0.00050076976],"domain_scores_gemma":[0.9985937,0.00080024236,0.00006901736,0.0004306923,0.000037850004,0.00006849975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025367863,0.00013466766,0.00038114926,0.0002497267,0.000032022494,0.0000021368985,0.0001955047,0.00013476385,0.000098876066],"category_scores_gemma":[0.0018849346,0.00008871851,0.00010830473,0.00042708128,0.0002483812,0.00004697439,0.000200836,0.00033530456,0.00000619719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000925709,0.0001496083,0.014350427,0.00025478392,0.000035598296,0.000051562685,0.0004148991,0.000016588192,0.9597337,0.00028814308,0.000006915471,0.024605151],"study_design_scores_gemma":[0.0018037364,0.00025137258,0.24858609,0.00063924066,0.00003935531,0.00012118692,0.0006089354,0.00032734394,0.7463436,0.00074130105,0.00034491598,0.00019289859],"about_ca_topic_score_codex":0.00017795501,"about_ca_topic_score_gemma":5.9397377e-7,"teacher_disagreement_score":0.23423566,"about_ca_system_score_codex":0.0000668986,"about_ca_system_score_gemma":0.000057841316,"threshold_uncertainty_score":0.3617836},"labels":[],"label_agreement":null},{"id":"W2536931592","doi":"10.1007/978-1-4939-6527-4_18","title":"Evaluation of Innate Immune Gene Expression Following HDAC Inhibitor Treatment by High Throughput qPCR and PhosFlow Cytometry","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"National Cancer Institute; National Institutes of Health","keywords":"Innate immune system; Flow cytometry; Gene expression; Immune system; Gene; Biology; Immunology; Genetics","score_opus":0.025917696852940895,"score_gpt":0.4066208533212952,"score_spread":0.38070315646835434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2536931592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80724007,0.009056889,0.1828328,0.00010291627,0.00022847267,0.0003983317,0.000040748397,0.0000087794415,0.00009102041],"genre_scores_gemma":[0.8228016,0.000593196,0.17610154,0.000032441916,0.00006702613,0.00015047874,0.00010098714,0.00004041267,0.00011233899],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9953889,0.002694069,0.0005019678,0.00070901867,0.00030626747,0.00039972694],"domain_scores_gemma":[0.9988661,0.00011746187,0.00016153953,0.0005856533,0.00018498514,0.00008425787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034580503,0.00026651943,0.00042784304,0.00021824052,0.000056192315,0.000008108604,0.00019784394,0.00041557878,0.000026047674],"category_scores_gemma":[0.0011900533,0.00019535855,0.00015310699,0.00024046632,0.00022959635,0.0000074338755,0.0002464383,0.0000997508,0.00000294908],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086604225,0.000112419024,0.0005776694,0.0000092844775,0.000093495175,0.000005903806,0.000042558142,0.0000050763997,0.93093085,0.000017199485,0.000048315265,0.0680706],"study_design_scores_gemma":[0.0027460163,0.00066947745,0.00015318076,0.000058014084,0.000052372838,0.000007845283,0.00001879804,0.000040347633,0.9942116,0.00051056105,0.0013079229,0.00022385104],"about_ca_topic_score_codex":0.000082906794,"about_ca_topic_score_gemma":0.000007694335,"teacher_disagreement_score":0.067846745,"about_ca_system_score_codex":0.00017914774,"about_ca_system_score_gemma":0.00015053134,"threshold_uncertainty_score":0.796649},"labels":[],"label_agreement":null},{"id":"W2537067634","doi":"10.1007/978-1-4899-7708-3_5","title":"The Combined Bisulfite Restriction Analysis (COBRA) Assay for the Analysis of Locus-Specific Changes in Methylation Patterns","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"","keywords":"DNA methylation; Bisulfite sequencing; Biology; Epigenetics; Methylated DNA immunoprecipitation; Locus (genetics); Methylation; Molecular biology; Bisulfite; Genetics; Gene; Restriction enzyme; Gene expression","score_opus":0.028227723742445927,"score_gpt":0.3710953084885247,"score_spread":0.34286758474607876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2537067634","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20279995,0.0026875155,0.79337966,0.00065075693,0.00012503153,0.0002951882,0.00003945336,0.0000037113966,0.000018751836],"genre_scores_gemma":[0.9605084,0.005741275,0.033239152,0.00005290498,0.000046629335,0.00016929532,0.00017250575,0.000018676361,0.00005117928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99694145,0.0017560072,0.00048265545,0.00044279205,0.00009958204,0.00027752924],"domain_scores_gemma":[0.99739426,0.0015299727,0.00028847088,0.0006148594,0.000142757,0.00002968417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004056053,0.00016413494,0.00036738862,0.00058898976,0.00007972512,0.00001565549,0.00030401818,0.0002571035,0.000008141685],"category_scores_gemma":[0.0009917298,0.00009205643,0.00029984707,0.0016366985,0.00013155233,0.0000026645864,0.000090967325,0.000080205245,2.4377323e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100908685,0.00002750043,0.06349516,0.0000029663704,0.00086576876,3.3043256e-7,0.000023302526,0.0015735787,0.867473,0.001234226,0.000002336044,0.0652009],"study_design_scores_gemma":[0.0006689038,0.00026479096,0.10212041,0.0000060249754,0.00076898135,8.424337e-8,0.00005358863,0.0036550032,0.8841795,0.002918093,0.005180597,0.0001840603],"about_ca_topic_score_codex":0.0001023966,"about_ca_topic_score_gemma":0.001899583,"teacher_disagreement_score":0.7601405,"about_ca_system_score_codex":0.00003306774,"about_ca_system_score_gemma":0.000022455297,"threshold_uncertainty_score":0.37539524},"labels":[],"label_agreement":null},{"id":"W2537355756","doi":"10.1007/978-1-4899-7708-3_17","title":"Increasing a Stable Transformation Efficiency of Arabidopsis by Manipulating the Endogenous Gene Expression Using Virus-Induced Gene Silencing","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Arabidopsis; Tobacco rattle virus; Biology; Epigenetics; Gene; Gene silencing; Genetics; Phenotype; Transformation (genetics); Gene expression; Endogeny; Cell biology; Mutant","score_opus":0.09921288502023516,"score_gpt":0.3573053810536032,"score_spread":0.25809249603336804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2537355756","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.871541,0.0006028543,0.1273526,0.00007333457,0.000040667786,0.00023806877,0.00008177098,0.000015935475,0.000053735745],"genre_scores_gemma":[0.94098586,0.00013838951,0.0587788,0.00003846702,0.000023179058,0.000018357043,0.0000132992955,0.0000017997146,0.0000018570446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996796,0.0019656506,0.00038107426,0.00028149065,0.00015707962,0.00041871704],"domain_scores_gemma":[0.9985739,0.0010867631,0.00015421123,0.00008927137,0.000055269502,0.000040570714],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023299628,0.0001479056,0.00026986797,0.000038276812,0.00022483295,0.000013233146,0.00029124453,0.000117359385,0.000024081935],"category_scores_gemma":[0.0006232042,0.000047102145,0.000074325704,0.00035417645,0.00010113918,0.000068252404,0.00012971555,0.00011465102,9.90282e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026417178,0.000029664296,0.00063253916,0.000005267738,0.000010372856,0.0000030880951,0.00017019904,0.000028078368,0.9627818,0.00000911874,6.789819e-7,0.0363028],"study_design_scores_gemma":[0.00013941363,0.000111977,0.0004205676,0.000044728837,0.0000075554353,0.000025133728,0.00014500997,0.000544533,0.9982005,0.00021432652,0.000031065574,0.00011519316],"about_ca_topic_score_codex":0.0014966283,"about_ca_topic_score_gemma":0.00005070206,"teacher_disagreement_score":0.06944482,"about_ca_system_score_codex":0.000064786975,"about_ca_system_score_gemma":0.000013345006,"threshold_uncertainty_score":0.22624642},"labels":[],"label_agreement":null},{"id":"W2537447655","doi":"10.1007/978-1-4939-6439-0_14","title":"Cleavable Linkers in Chemical Proteomics Applications","year":2016,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"China Scholarship Council; Javna Agencija za Raziskovalno Dejavnost RS; Canadian Institute for Theoretical Astrophysics","keywords":"Proteomics; Computational biology; Identification (biology); Mass spectrometry; Chemical biology; Profiling (computer programming); Chemistry; Nanotechnology; Computer science; Biology; Biochemistry; Chromatography; Materials science","score_opus":0.039435571400969656,"score_gpt":0.46575758205056605,"score_spread":0.4263220106495964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2537447655","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[5.382239e-7,0.45708346,0.5401231,0.000023392164,0.000009839602,0.00077468297,0.0000420333,0.000055920522,0.0018870188],"genre_scores_gemma":[5.99665e-8,0.48678106,0.50676715,0.000019625732,0.00003967898,0.0061752023,0.00008463022,0.000047074165,0.000085491556],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99749887,0.00026294906,0.0008783143,0.00084584695,0.00005066986,0.00046337122],"domain_scores_gemma":[0.9982547,0.000323232,0.00035673374,0.0009646063,0.00002972965,0.000070961534],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006030998,0.0004116205,0.0012569068,0.00021527703,0.00002812048,0.000010508258,0.00077176996,0.0012392015,0.00008221139],"category_scores_gemma":[0.00017572557,0.00034926817,0.000288989,0.00042810498,0.00018295279,0.00001739946,0.00029361743,0.0009462044,0.000028176437],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000026105636,0.000047934063,0.0000031142122,0.0013304843,0.000017895529,0.000003579885,0.0000027639028,4.1734944e-7,0.08635822,0.006132996,0.000008328666,0.90609163],"study_design_scores_gemma":[0.00013318802,0.0000058349165,1.0160564e-8,0.0014601401,0.000031672884,0.000015243133,0.0000017635015,0.0000066311013,0.05419634,0.028929304,0.91484785,0.00037204972],"about_ca_topic_score_codex":0.000010197062,"about_ca_topic_score_gemma":0.0000011144083,"teacher_disagreement_score":0.9148395,"about_ca_system_score_codex":0.00033404698,"about_ca_system_score_gemma":0.0001609615,"threshold_uncertainty_score":0.99989593},"labels":[],"label_agreement":null},{"id":"W2538155227","doi":"10.1007/978-1-4899-7708-3_18","title":"The Random Oligonucleotide-Primed Synthesis Assay for the Quantification of DNA Strand Breaks","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"","keywords":"DNA damage; DNA; Biology; Oligonucleotide; DNA replication; Molecular biology; DNA repair; Replication protein A; Deoxyribose; Genetics; Gene; DNA-binding protein; Transcription factor","score_opus":0.020238610344038,"score_gpt":0.34805029026231976,"score_spread":0.32781167991828175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2538155227","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030056532,0.0012500389,0.9665672,0.0009881327,0.00029429139,0.0006392774,0.0000293403,0.0000106645275,0.00016447998],"genre_scores_gemma":[0.6678001,0.00065773627,0.33034548,0.00017959272,0.00009231737,0.00058950984,0.000016313998,0.00005323054,0.00026567842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99704593,0.0017306036,0.0004234978,0.000406446,0.00007522504,0.00031827673],"domain_scores_gemma":[0.9965241,0.0023105522,0.00020239422,0.0008148452,0.00011186159,0.000036250476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0048609786,0.00017243797,0.0002632378,0.000047215704,0.00010248989,0.000011822768,0.0005460835,0.0002473605,0.000008240421],"category_scores_gemma":[0.004242655,0.00008567478,0.00021903343,0.00010046784,0.00033857266,0.0000021318453,0.00010569167,0.00006621635,0.0000017399295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031440382,0.000022621904,0.00009461618,0.000007112995,0.000099914425,3.6432758e-7,0.000009162509,0.000008633082,0.87649274,0.004468447,0.000042359046,0.11843965],"study_design_scores_gemma":[0.00096499844,0.00012632771,0.0001698872,0.000013478185,0.000049032446,0.0000054028546,0.000032263117,0.00014500372,0.97938186,0.0057828645,0.013201654,0.0001272111],"about_ca_topic_score_codex":0.0000158738,"about_ca_topic_score_gemma":0.000026693795,"teacher_disagreement_score":0.6377436,"about_ca_system_score_codex":0.00001373116,"about_ca_system_score_gemma":0.00005823739,"threshold_uncertainty_score":0.50791603},"labels":[],"label_agreement":null},{"id":"W2539191947","doi":"10.1007/978-1-4899-7708-3_16","title":"Bioinformatics Analysis of Small RNA Transcriptomes: The Detailed Workflow","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Lethbridge","funders":"","keywords":"Workflow; Transcriptome; Computational biology; RNA; Small RNA; Computer science; microRNA; RNA-Seq; Biology; Data science; Genetics; Database; Gene; Gene expression","score_opus":0.043951124351448864,"score_gpt":0.34839353243336035,"score_spread":0.3044424080819115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2539191947","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6634976,0.00042040288,0.3337052,0.0015182288,0.000082680235,0.00024895315,0.000075771226,0.000022572116,0.00042856604],"genre_scores_gemma":[0.54124826,0.00039659464,0.45700312,0.0009251056,0.00004040186,0.000094513634,0.00012166759,0.000003649744,0.00016669118],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676937,0.0019084555,0.0004728612,0.00029760538,0.00010341208,0.00044826776],"domain_scores_gemma":[0.99807626,0.0014543671,0.00013774727,0.00019698727,0.0000710967,0.00006356052],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022298398,0.00017001525,0.0004737457,0.00013536257,0.000055786473,0.000010265287,0.00075393205,0.00026027038,0.00021067332],"category_scores_gemma":[0.0005910831,0.000045126108,0.00030669305,0.0017279652,0.0003794118,0.00002098329,0.00012621414,0.00016449897,0.000008697392],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002836845,0.000025089357,0.012791095,0.0000021731305,0.00023896234,0.0000052812306,0.000032827338,0.0000062013337,0.80395955,0.0005580715,0.000004604354,0.18234779],"study_design_scores_gemma":[0.0007308089,0.0006851213,0.09970203,0.000050830553,0.0005228556,0.00001801211,0.00017614667,0.0023113117,0.88019204,0.008826101,0.00619954,0.0005852227],"about_ca_topic_score_codex":0.00004987028,"about_ca_topic_score_gemma":0.00052422105,"teacher_disagreement_score":0.18176256,"about_ca_system_score_codex":0.00002196469,"about_ca_system_score_gemma":0.000014614943,"threshold_uncertainty_score":0.23067251},"labels":[],"label_agreement":null},{"id":"W2540287070","doi":"10.1007/978-1-4939-6448-2_6","title":"Characterizing Plexin GTPase Interactions Using Gel Filtration, Surface Plasmon Resonance Spectrometry, and Isothermal Titration Calorimetry","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"National Institute of General Medical Sciences","keywords":"Isothermal titration calorimetry; Surface plasmon resonance; Calorimetry; Materials science; Mass spectrometry; Isothermal process; Chemistry; Analytical Chemistry (journal); Nanotechnology; Chromatography; Physical chemistry; Nanoparticle; Thermodynamics; Physics","score_opus":0.017359154905530895,"score_gpt":0.35263916958230934,"score_spread":0.3352800146767784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2540287070","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4850204,0.00041845048,0.51410556,0.000097883814,0.00012836407,0.00009972829,0.000018390387,0.000007465758,0.000103747254],"genre_scores_gemma":[0.46940085,0.000097977325,0.5300135,0.00024423652,0.000091681824,0.000009067564,0.00003854496,0.000022405651,0.00008171032],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984809,0.0004651353,0.0002777481,0.00045606095,0.000050913994,0.0002692179],"domain_scores_gemma":[0.9994422,0.0000609309,0.000112528454,0.00028902452,0.000045144185,0.000050122973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043281587,0.00018295994,0.00019816674,0.0001002456,0.000061987295,0.000017027261,0.00012537609,0.00022748951,0.000018390605],"category_scores_gemma":[0.0002898076,0.0001510648,0.00005395438,0.00015840011,0.00012838165,0.000012023365,0.00009426151,0.00012926079,0.0000015767838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007349846,0.0000162268,0.005556265,0.0000062857116,0.000019298888,0.000005060664,0.00002396899,0.000013608104,0.98640823,0.00073952676,0.000004737071,0.0071333],"study_design_scores_gemma":[0.00045116854,0.00013726011,0.005325747,0.000022324988,0.000011072865,0.00005461149,0.0000140815355,0.00063286483,0.98939246,0.0013548809,0.0023807157,0.00022283268],"about_ca_topic_score_codex":0.00008474437,"about_ca_topic_score_gemma":0.000054178443,"teacher_disagreement_score":0.015907966,"about_ca_system_score_codex":0.000039605715,"about_ca_system_score_gemma":0.0000470394,"threshold_uncertainty_score":0.6160244},"labels":[],"label_agreement":null},{"id":"W2540738256","doi":"10.1007/978-1-4939-6475-8_13","title":"Purification of Distinct Subsets of Epithelial Cells from Normal Human Breast Tissue","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"National Institute for Health and Care Research; Cancer Research UK","keywords":"Cell sorting; Biology; Cell biology; Epithelium; Cell; Cell type; Cellular differentiation; Function (biology); Flow cytometry; Immunology; Gene; Genetics","score_opus":0.022854700214458346,"score_gpt":0.3804718735778603,"score_spread":0.35761717336340193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2540738256","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49338228,0.00029696434,0.5052209,0.00016771776,0.00014505697,0.00015765538,0.00022945931,0.000006292708,0.00039367247],"genre_scores_gemma":[0.6622973,0.000042676296,0.33742443,0.000035573034,0.00005561227,0.000011848869,0.000040757175,0.000013376015,0.00007839158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865204,0.0004783479,0.00039467314,0.00024136006,0.00007173515,0.0001618372],"domain_scores_gemma":[0.99921167,0.00013678857,0.000179037,0.0003528069,0.000068608126,0.000051087485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006017731,0.000105659994,0.00041534522,0.00011074863,0.000010163195,9.848818e-7,0.000108564025,0.00012351107,0.0003235952],"category_scores_gemma":[0.00009382931,0.0000732493,0.00008503434,0.00012411406,0.00019652503,0.0000116358415,0.00004419908,0.00007028696,0.000004821518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009065291,0.00007824222,0.0035971117,0.000025208972,0.000032115113,0.0000066784146,0.00004042733,3.077854e-7,0.8265182,0.0005534914,0.000007763723,0.16904981],"study_design_scores_gemma":[0.001043558,0.00018243496,0.017690342,0.0000420034,0.0000676442,0.0000070714573,0.000009088593,0.0000018182338,0.9765591,0.0014380255,0.002884542,0.00007438678],"about_ca_topic_score_codex":0.0006805377,"about_ca_topic_score_gemma":0.000041396135,"teacher_disagreement_score":0.16897543,"about_ca_system_score_codex":0.00002741217,"about_ca_system_score_gemma":0.000040142288,"threshold_uncertainty_score":0.35431406},"labels":[],"label_agreement":null},{"id":"W2541164848","doi":"10.1007/978-1-4939-6448-2_18","title":"Assays to Examine Transmembrane Semaphorin Function In Vitro","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Semaphorin; Transmembrane protein; Function (biology); Plexin; Biology; Neuroscience; Cell biology; Axon guidance; Neurite; In vitro; Receptor; Genetics; Axon","score_opus":0.05160493966411932,"score_gpt":0.3793662925617346,"score_spread":0.32776135289761527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2541164848","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27746964,0.00006549485,0.7207491,0.0006764054,0.00024801245,0.00019334487,0.000004454005,0.000029731718,0.0005638436],"genre_scores_gemma":[0.8728331,0.000040221592,0.12358506,0.0032506154,0.000045404096,0.0000823716,7.566563e-7,0.000025731957,0.00013679046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99669194,0.0018493437,0.0003320554,0.0006159283,0.000095775955,0.00041495208],"domain_scores_gemma":[0.9988168,0.00080228125,0.00004782634,0.00024827267,0.000012838696,0.00007198992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012039037,0.00015962338,0.00026858575,0.0002990958,0.000026505222,0.0000062332992,0.00024190612,0.00013559857,0.00006182479],"category_scores_gemma":[0.0012038475,0.00011827007,0.000060658516,0.0005640641,0.00007395465,0.00004619327,0.00006125706,0.0001679965,0.000034696706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020885262,0.000035042485,0.00018481404,0.000004478389,0.0000013203068,0.00005964285,0.00002419187,0.00003350114,0.9170184,0.0010301289,0.0000029314751,0.081396684],"study_design_scores_gemma":[0.00058725284,0.00020673288,0.00056824996,0.000020487993,0.0000030287513,0.000011362888,0.0000047984695,0.00006408981,0.9908209,0.0040754997,0.0034799434,0.00015767063],"about_ca_topic_score_codex":0.000016927046,"about_ca_topic_score_gemma":0.000008758265,"teacher_disagreement_score":0.59716403,"about_ca_system_score_codex":0.000051095987,"about_ca_system_score_gemma":0.000021371066,"threshold_uncertainty_score":0.48229137},"labels":[],"label_agreement":null},{"id":"W2545255051","doi":"10.1007/978-1-4939-6406-2_14","title":"Prediction of Disordered RNA, DNA, and Protein Binding Regions Using DisoRDPbind","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":88,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; National Natural Science Foundation of China","keywords":"Computational biology; Intrinsically disordered proteins; RNA; Web server; Biology; DNA; Genetics; Computer science; Gene; Biophysics","score_opus":0.0358322408585095,"score_gpt":0.3379214721583087,"score_spread":0.3020892312997992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2545255051","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49613857,0.00042775046,0.50296277,0.00007725492,0.00006135882,0.00021763754,0.000020066243,0.0000050611466,0.00008952167],"genre_scores_gemma":[0.55658025,0.00020543275,0.44288313,0.000031876898,0.00004449025,0.000070892485,0.00001651299,0.000030990806,0.00013639267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99807113,0.00085723214,0.0003252604,0.00042849797,0.000056198485,0.00026166148],"domain_scores_gemma":[0.9993641,0.000049387698,0.0001521456,0.00034518365,0.000036840902,0.000052377465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079049304,0.00016860937,0.00024799924,0.00013557874,0.000045747012,0.000005384928,0.00015541626,0.0003006787,0.000011685927],"category_scores_gemma":[0.00044353795,0.0001284057,0.0000763849,0.00011028874,0.00018395849,0.000004289388,0.00014298264,0.000059839906,7.7732795e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005124343,0.000028168477,0.0010063122,0.000014853393,0.000031597003,0.0000016925153,0.000018178222,0.0000019525714,0.9625208,0.0014579832,0.0000023825764,0.034864854],"study_design_scores_gemma":[0.00054548675,0.00024455422,0.00013484122,0.00006582151,0.000013412807,0.000007925745,0.000030320774,0.000025368825,0.9891588,0.008309114,0.0013188074,0.0001455562],"about_ca_topic_score_codex":0.000016499898,"about_ca_topic_score_gemma":0.0000051463767,"teacher_disagreement_score":0.06044168,"about_ca_system_score_codex":0.000013860336,"about_ca_system_score_gemma":0.000037716756,"threshold_uncertainty_score":0.5236233},"labels":[],"label_agreement":null},{"id":"W2546417955","doi":"10.1007/978-1-4939-6581-6_1","title":"Phagocytosis: Hungry, Hungry Cells","year":2016,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":60,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Canadian Institutes of Health Research","keywords":"Phagosome; Phagolysosome; Phagocytosis; Cell biology; Biology; Endosome; Phagocyte; Endocytosis; Internalization; Cell; Intracellular; Biochemistry","score_opus":0.045939483333131505,"score_gpt":0.4317948232375943,"score_spread":0.3858553399044628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546417955","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000024696367,0.8539459,0.14148231,0.000029237746,0.0023971815,0.0008098549,0.00008053512,0.00008493304,0.0011675358],"genre_scores_gemma":[0.0000026583702,0.943419,0.05403157,0.000111694884,0.00007818379,0.00034858845,0.00037326326,0.000118000586,0.0015170585],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9881306,0.008121264,0.0015124293,0.0011964465,0.0000409559,0.0009982926],"domain_scores_gemma":[0.9969989,0.00095427234,0.00075190025,0.0011825986,0.00006768393,0.000044627097],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0021343268,0.00089056283,0.003316269,0.000791133,0.00010954469,0.000019808833,0.0010029576,0.0025370938,0.0007135733],"category_scores_gemma":[0.00031951672,0.0006433654,0.0010537477,0.0005063572,0.0004655105,0.000059426216,0.00047454116,0.0009806686,0.001081999],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011978816,0.000071734234,0.0000019122706,0.00066641765,0.00038779672,0.000010703744,0.000015025577,1.4143176e-7,0.23274855,0.0013215434,0.00022638224,0.7645378],"study_design_scores_gemma":[0.0006595185,0.00013635839,0.000001616433,0.002931239,0.00036716548,0.000096417025,0.0000054128386,3.6030298e-7,0.07529881,0.0010209306,0.9188037,0.0006784708],"about_ca_topic_score_codex":0.000025736455,"about_ca_topic_score_gemma":0.0000021596356,"teacher_disagreement_score":0.9185773,"about_ca_system_score_codex":0.00024773282,"about_ca_system_score_gemma":0.0002739275,"threshold_uncertainty_score":0.9996958},"labels":[],"label_agreement":null},{"id":"W2546459504","doi":"10.1007/978-1-4939-6581-6_2","title":"Analysis of Human and Mouse Neutrophil Phagocytosis by Flow Cytometry","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Antibody opsonization; Phagocytosis; Flow cytometry; Opsonin; Antibody; Immunology; Platelet; Granulocyte; Biology; Complement receptor; Complement system; Chemistry; Microbiology; Cell biology","score_opus":0.017335823253087412,"score_gpt":0.34834414693135596,"score_spread":0.33100832367826855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546459504","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6184505,0.0018954554,0.37911248,0.00011712775,0.00008386505,0.000117961776,0.00012591458,0.000023209239,0.00007342217],"genre_scores_gemma":[0.90718853,0.00044292005,0.091325976,0.00038990966,0.000010025153,0.00004742725,0.00014100668,0.00003387702,0.0004203269],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965686,0.0019423207,0.00047890612,0.0005783486,0.000026705684,0.000405125],"domain_scores_gemma":[0.99891895,0.00035755694,0.0001758086,0.0004514188,0.00006179715,0.000034462377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086373615,0.00025319782,0.00082852435,0.00087900995,0.000065134656,0.0000044622725,0.0002867311,0.00039561614,0.00035284116],"category_scores_gemma":[0.00016913554,0.00017846,0.0001846232,0.0007963631,0.00047685756,0.00003678247,0.00019913439,0.00018918916,0.000012246916],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055364868,0.00008927072,0.004632323,0.000006620308,0.00094624684,0.0000064437486,0.000039106162,0.0000012512692,0.96208966,0.0032357816,0.000022608672,0.02887535],"study_design_scores_gemma":[0.0011797114,0.00035938428,0.0009758661,0.000013843311,0.00032218773,0.000005477629,0.000024369541,0.0000047693925,0.99418074,0.0019431658,0.00077222276,0.0002182764],"about_ca_topic_score_codex":0.00007145307,"about_ca_topic_score_gemma":0.000011417046,"teacher_disagreement_score":0.28873798,"about_ca_system_score_codex":0.00003590458,"about_ca_system_score_gemma":0.0000149584375,"threshold_uncertainty_score":0.72773874},"labels":[],"label_agreement":null},{"id":"W2546493431","doi":"10.1007/978-1-4939-6581-6_5","title":"Single Cell Analysis of Phagocytosis, Phagosome Maturation, Phagolysosomal Leakage, and Cell Death Following Exposure of Macrophages to Silica Particles","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Hospital for Sick Children","keywords":"Phagocytosis; Phagosome; Silicosis; Opsonin; Chemistry; Programmed cell death; Cell biology; Cell; Immunology; Microbiology; Biology; Medicine; Pathology; Apoptosis; Biochemistry","score_opus":0.017523648112022307,"score_gpt":0.3231561992608711,"score_spread":0.3056325511488488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546493431","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8340815,0.008668929,0.15667394,0.0000916298,0.0001438522,0.00020742383,0.00003344761,0.000017554594,0.0000817384],"genre_scores_gemma":[0.92300653,0.000079809535,0.07667195,0.000060034025,0.0000064902133,0.00002572728,0.000031290478,0.000018155903,0.00009999683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996999,0.0013744363,0.00073768647,0.00047277432,0.00004458864,0.00037148743],"domain_scores_gemma":[0.9986901,0.0004719374,0.00030387146,0.00041639913,0.00008185264,0.00003582094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007882445,0.00023496532,0.00081930467,0.00055988855,0.000052802654,0.000006723378,0.00023274409,0.00030592686,0.00007565234],"category_scores_gemma":[0.0002213341,0.00017688521,0.00026779977,0.00068957364,0.00015546204,0.000075217715,0.00015041043,0.00010049243,0.000005067119],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014801299,0.00022648732,0.02157328,0.000021946096,0.00048965565,0.00000306035,0.0002862884,0.000030794086,0.95922124,0.0003096511,0.000005705586,0.017683866],"study_design_scores_gemma":[0.0013530732,0.00045721498,0.02747864,0.000025120597,0.0005247893,0.0000033442777,0.00007311108,0.000020638487,0.96926177,0.0003758526,0.0002383344,0.00018808746],"about_ca_topic_score_codex":0.000044007735,"about_ca_topic_score_gemma":0.00000877826,"teacher_disagreement_score":0.088925056,"about_ca_system_score_codex":0.00003576868,"about_ca_system_score_gemma":0.000028581191,"threshold_uncertainty_score":0.721317},"labels":[],"label_agreement":null},{"id":"W2546586684","doi":"10.1007/978-1-4939-6581-6_3","title":"Quantitative Efferocytosis Assays","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Efferocytosis; Cell biology; Phagocytosis; Characterization (materials science); Biology; Cell; Computational biology; Chemistry; Macrophage; Nanotechnology; Biochemistry; In vitro; Materials science","score_opus":0.032629513318558345,"score_gpt":0.3969020009648188,"score_spread":0.36427248764626047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546586684","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11059016,0.0035805556,0.88319445,0.000544779,0.00055056904,0.00017617283,0.0000107769465,0.00004795035,0.0013045776],"genre_scores_gemma":[0.5878814,0.00017216738,0.4107298,0.00031201114,0.000013502142,0.00009376306,0.000037673195,0.00003193711,0.0007277667],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962144,0.0026281925,0.00035750485,0.0003910294,0.000017000146,0.000391873],"domain_scores_gemma":[0.9987021,0.0007783809,0.00011461948,0.0003405912,0.000048681155,0.000015620057],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011765804,0.00018277385,0.0003818707,0.00021395403,0.00005498038,0.0000045222246,0.00024105179,0.00036660006,0.00031901067],"category_scores_gemma":[0.00076010794,0.00011948887,0.00011775017,0.0001987801,0.00027921205,0.00004882016,0.000115794675,0.00015284539,0.00022492814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086334796,0.000042476797,0.0022837245,0.000003044011,0.00006923972,0.0000023008583,0.000041798514,9.3445544e-7,0.88613975,0.032752138,0.00005764621,0.078520626],"study_design_scores_gemma":[0.0012287373,0.00031065432,0.0045278156,0.000031085565,0.000016697762,0.000016301468,0.00002254574,0.00000595437,0.9696189,0.0136676505,0.010364079,0.00018956057],"about_ca_topic_score_codex":0.000032851665,"about_ca_topic_score_gemma":0.000005157823,"teacher_disagreement_score":0.47729123,"about_ca_system_score_codex":0.00006661731,"about_ca_system_score_gemma":0.00002788155,"threshold_uncertainty_score":0.48726147},"labels":[],"label_agreement":null},{"id":"W2546716211","doi":"10.1007/978-1-4939-6581-6_21","title":"Filamentous Bacteria as Targets to Study Phagocytosis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Phagosome; Phagocytosis; Bacteria; Microbiology; Cell biology; Biology; Chemistry; Genetics","score_opus":0.022462932042647567,"score_gpt":0.3843009126775896,"score_spread":0.36183798063494205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546716211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8370548,0.00027472022,0.15989044,0.00038396826,0.0015364118,0.00046146702,0.000016014917,0.000058657795,0.00032350997],"genre_scores_gemma":[0.89818454,0.000027815113,0.100096755,0.0004321985,0.000046038094,0.00024457762,0.000016763335,0.00002972644,0.00092158065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99672097,0.0020235619,0.00035188865,0.00047733274,0.000008496083,0.00041776485],"domain_scores_gemma":[0.99922025,0.00022063503,0.000070656424,0.00040574704,0.00004902324,0.000033675537],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008216293,0.00020820719,0.00038876737,0.00024058165,0.000074753,0.0000099392155,0.00024248553,0.00025573483,0.0028222199],"category_scores_gemma":[0.00047092536,0.00014025166,0.00007920292,0.0002276119,0.00006149649,0.000030981202,0.00020956062,0.00012105977,0.0005591781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011860579,0.00026336033,0.0050311508,0.0000012794515,0.00011953352,0.0000062296663,0.00013877943,1.9293105e-7,0.9251381,0.0005756051,0.00009130136,0.068515874],"study_design_scores_gemma":[0.0016055991,0.0011239637,0.011813123,0.000009576388,0.000025696443,0.000039065228,0.000066111665,7.252681e-8,0.9324733,0.0015582517,0.05106155,0.00022366918],"about_ca_topic_score_codex":0.00020863248,"about_ca_topic_score_gemma":0.000032349762,"teacher_disagreement_score":0.0682922,"about_ca_system_score_codex":0.00004725956,"about_ca_system_score_gemma":0.000023978851,"threshold_uncertainty_score":0.9980893},"labels":[],"label_agreement":null},{"id":"W2546924190","doi":"10.1007/978-1-4939-6670-7_19","title":"Detection of Senescence Markers During Mammalian Embryonic Development","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Senescence; Biology; Cell biology; Embryonic stem cell; Cellular senescence; Cyclin; Embryo; Cell; Cell growth; Cell cycle; In vitro; Phenotype; Genetics; Gene","score_opus":0.01816036598467295,"score_gpt":0.34575024182876946,"score_spread":0.3275898758440965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2546924190","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5640718,0.00025818823,0.43508655,0.00015389071,0.00014580962,0.00014329245,8.5600465e-7,0.000022448703,0.00011721714],"genre_scores_gemma":[0.6317524,0.000063811756,0.3677947,0.000070382055,0.000018086072,0.000019459038,0.0000015150678,0.000015322003,0.00026434474],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982759,0.0005341868,0.000378492,0.0003716415,0.000097483324,0.00034230953],"domain_scores_gemma":[0.9992891,0.00012454689,0.0001128444,0.0003254653,0.0000623087,0.00008572691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008323561,0.00015918748,0.00035706925,0.00027493402,0.00003249064,0.0000021298872,0.00012252768,0.00017801237,0.000046809957],"category_scores_gemma":[0.00048280915,0.000115535906,0.00007537384,0.000295818,0.00016213307,0.000022984952,0.0000690135,0.00012382516,0.000008504154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017435198,0.000030822834,0.027118625,0.00006734825,0.000023878902,0.00004552338,0.00005683816,3.911683e-7,0.81848294,0.00005920351,5.417989e-7,0.15393953],"study_design_scores_gemma":[0.0008421211,0.000111542955,0.12417582,0.00012155297,0.000012887785,0.00007120077,0.00003737542,0.000007632705,0.87335306,0.00013813404,0.0009989218,0.00012974587],"about_ca_topic_score_codex":0.000027796212,"about_ca_topic_score_gemma":0.000025922604,"teacher_disagreement_score":0.15380979,"about_ca_system_score_codex":0.00012732281,"about_ca_system_score_gemma":0.000102849386,"threshold_uncertainty_score":0.47114176},"labels":[],"label_agreement":null},{"id":"W2547219477","doi":"10.1007/978-1-4939-6581-6_20","title":"Bacterial Binding, Phagocytosis, and Killing: Measurements Using Colony Forming Units","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"","keywords":"Phagocytosis; Opsonin; Bacterial colony; Microbiology; Colony-forming unit; Bacteria; Immunofluorescence; Phagocyte; Biology; Chemistry; Immunology; Antibody; Genetics","score_opus":0.07046223113161823,"score_gpt":0.3755385636216773,"score_spread":0.30507633249005905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2547219477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7288272,0.0010824414,0.26909444,0.000078803896,0.0006319388,0.00016117911,0.0000044768435,0.000021873544,0.00009769797],"genre_scores_gemma":[0.74928033,0.00032926022,0.24945563,0.00019923702,0.00006376091,0.00005745441,0.00008274115,0.000056158864,0.00047543697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99693334,0.0019856328,0.00036650035,0.00030267634,0.000020612662,0.00039124122],"domain_scores_gemma":[0.99929965,0.0002672268,0.00014568293,0.00019805119,0.0000717175,0.00001766424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016776555,0.00017459011,0.00030840113,0.00026586762,0.000107462714,0.000008871214,0.00014526516,0.00037874267,0.0001119087],"category_scores_gemma":[0.00059776416,0.00012924179,0.00004077843,0.000191378,0.00019530123,0.000075264375,0.00011945265,0.00013222975,0.000021181828],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019973428,0.000015200723,0.0026022065,0.000006000193,0.00007267713,0.0000034134252,0.00008977431,4.6943026e-7,0.95724195,0.0004638355,0.000007313785,0.039297447],"study_design_scores_gemma":[0.0015957073,0.00014282807,0.00029300372,0.000059923943,0.000028041659,0.000052604668,0.000040113155,0.000006965695,0.98446494,0.0004121103,0.012726357,0.00017739831],"about_ca_topic_score_codex":0.000040410618,"about_ca_topic_score_gemma":0.0000053451395,"teacher_disagreement_score":0.03912005,"about_ca_system_score_codex":0.000077472534,"about_ca_system_score_gemma":0.00007165806,"threshold_uncertainty_score":0.5270327},"labels":[],"label_agreement":null},{"id":"W2547483025","doi":"10.1007/978-1-4939-6581-6_6","title":"Quantitative Live-Cell Fluorescence Microscopy During Phagocytosis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Phagosome; Phagocytosis; Cell biology; Confocal microscopy; Vacuole; Fluorescence microscope; Cytoplasm; Biology; Confocal; Effector; Intracellular; Macrophage; Phagolysosome; Green fluorescent protein; Chemistry; Fluorescence; Biochemistry; In vitro; Gene","score_opus":0.02180640101735327,"score_gpt":0.3707302857802498,"score_spread":0.34892388476289654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2547483025","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6382763,0.0057516643,0.3545687,0.00021351351,0.00053727115,0.00023559744,0.000017285716,0.000053128806,0.00034654883],"genre_scores_gemma":[0.612001,0.00033262683,0.3865283,0.000105067535,0.000013721108,0.00006905855,0.000024359433,0.000034843015,0.00089098467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99635303,0.0020509989,0.00046014646,0.0005607234,0.000023127064,0.0005519998],"domain_scores_gemma":[0.99887013,0.00044456107,0.00017803986,0.0004182078,0.00006450241,0.000024545116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007813098,0.00025594563,0.00044581888,0.0002419395,0.000104763705,0.000009955893,0.00034407698,0.00038947316,0.000381545],"category_scores_gemma":[0.00036212354,0.0001847117,0.00014089051,0.00022388478,0.0004108188,0.00007932171,0.0001741828,0.00021592811,0.00033899525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019103219,0.00009770071,0.0038448786,0.000012952595,0.000052012252,0.000006292344,0.00016073202,0.0000013165287,0.9823729,0.0020213895,0.000024103241,0.01121474],"study_design_scores_gemma":[0.001813376,0.00026539192,0.004468394,0.000057684603,0.000019036534,0.000022295328,0.000063033985,0.000005243782,0.99007374,0.0013981047,0.0015536607,0.0002600644],"about_ca_topic_score_codex":0.00005631044,"about_ca_topic_score_gemma":0.000003652053,"teacher_disagreement_score":0.031959616,"about_ca_system_score_codex":0.00009658756,"about_ca_system_score_gemma":0.00004410633,"threshold_uncertainty_score":0.7532324},"labels":[],"label_agreement":null},{"id":"W2548164268","doi":"10.1007/978-1-4939-6581-6_4","title":"Quantifying Phagocytosis by Immunofluorescence and Microscopy","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Canadian Institutes of Health Research","keywords":"Phagocytosis; Internalization; Cell biology; Opsonin; Macrophage; Immune system; Innate immune system; Receptor; Biology; Immunofluorescence; Fluorescence microscope; Chemistry; Antibody; Microbiology; Immunology; Fluorescence; Biochemistry; In vitro","score_opus":0.02716318551228957,"score_gpt":0.38697373816362346,"score_spread":0.3598105526513339,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548164268","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36795303,0.034229893,0.59629136,0.0005511826,0.00056078273,0.00020905935,0.000023889661,0.000047777554,0.00013300528],"genre_scores_gemma":[0.7881648,0.0016893687,0.2091879,0.00034180758,0.000011207204,0.00006291476,0.000046644,0.000036287187,0.00045909928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974473,0.0012647051,0.00037522675,0.00046615515,0.000016648248,0.0004299463],"domain_scores_gemma":[0.9991885,0.0003179251,0.00011824137,0.0003232551,0.00003286431,0.000019243484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009091693,0.00020705927,0.0003734526,0.0001475446,0.000087204935,0.000010609117,0.00022449209,0.00035550026,0.00012866911],"category_scores_gemma":[0.0002850543,0.00014578007,0.00006977226,0.0001548701,0.00041414294,0.00006759944,0.00015350485,0.00016436554,0.000038664344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005436946,0.000035556033,0.007342488,0.000005580672,0.000044748827,0.000001224168,0.000042292624,7.027995e-8,0.87745726,0.0013544268,0.00013345607,0.1135285],"study_design_scores_gemma":[0.0011883758,0.00012316895,0.0026829152,0.000046460013,0.000014560942,0.000029787889,0.000018590248,0.0000029376029,0.9734818,0.0009539098,0.021253102,0.00020439085],"about_ca_topic_score_codex":0.00007749309,"about_ca_topic_score_gemma":0.0000032368848,"teacher_disagreement_score":0.42021173,"about_ca_system_score_codex":0.00004853146,"about_ca_system_score_gemma":0.00002326333,"threshold_uncertainty_score":0.59447384},"labels":[],"label_agreement":null},{"id":"W2548299591","doi":"10.1007/978-1-4939-6581-6_23","title":"Mycobacterium tuberculosis: Readouts of Bacterial Fitness and the Environment Within the Phagosome","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Heart, Lung, and Blood Institute","keywords":"Phagosome; Mycobacterium tuberculosis; Compartment (ship); Biology; Tuberculosis; Flow cytometry; Microbiology; Cell biology; Phagocytosis; Immunology; Pathology; Medicine","score_opus":0.024367039486848756,"score_gpt":0.3726096977821483,"score_spread":0.34824265829529955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548299591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85493267,0.0024443709,0.109856464,0.031020876,0.00035870558,0.0009049513,0.000023692233,0.000017423206,0.00044086695],"genre_scores_gemma":[0.819298,0.0020261814,0.17509852,0.0027974495,0.00020111125,0.00032099214,0.00002237595,0.00004337725,0.00019197313],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9940196,0.0046548476,0.0005066887,0.0003570894,0.000100609665,0.00036115808],"domain_scores_gemma":[0.99745834,0.0017038613,0.00013825104,0.00058407214,0.000029906072,0.00008557979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004779974,0.00017153689,0.0006042797,0.00008926026,0.000041471532,0.000004653663,0.00021312146,0.00020542815,0.00013166145],"category_scores_gemma":[0.0025118603,0.0000668774,0.00011995465,0.00010548448,0.0015176986,0.000020756568,0.0002358537,0.00023834816,0.000007791101],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085421285,0.000045168446,0.009055122,0.00002567505,0.00015208931,0.0000119310835,0.00019200107,0.0000014736235,0.9614195,0.008236931,0.000031837844,0.01997402],"study_design_scores_gemma":[0.018005064,0.0017304044,0.095854916,0.00025692853,0.00039665122,0.00041926865,0.0003216129,0.00033224985,0.81195587,0.049991347,0.020199759,0.00053592667],"about_ca_topic_score_codex":0.000106648025,"about_ca_topic_score_gemma":0.000008255349,"teacher_disagreement_score":0.14946367,"about_ca_system_score_codex":0.000039850333,"about_ca_system_score_gemma":0.00004100325,"threshold_uncertainty_score":0.55920243},"labels":[],"label_agreement":null},{"id":"W2548435577","doi":"10.1007/978-1-4939-6581-6_14","title":"Fluorometric Approaches to Measuring Reductive and Oxidative Events in Phagosomes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Phagosome; Redox; Cell biology; Oxidative phosphorylation; Reactive oxygen species; Organelle; Chemistry; Function (biology); Biology; Biochemistry; Phagocytosis","score_opus":0.08390793504197618,"score_gpt":0.3692330598484121,"score_spread":0.2853251248064359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548435577","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6969056,0.001471119,0.3005912,0.0003106569,0.00010577179,0.00029254984,0.000010624209,0.000006472601,0.00030599174],"genre_scores_gemma":[0.7667338,0.00024020197,0.23254396,0.00013740052,0.000046649584,0.00012834952,0.000016356622,0.000020424162,0.00013282617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967265,0.0017134469,0.0003008102,0.0007850536,0.00005461765,0.00041954382],"domain_scores_gemma":[0.99932945,0.00014509387,0.00008086358,0.00031874207,0.00003495162,0.000090911206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012066234,0.00023950778,0.00034094218,0.00045166732,0.000033269986,0.0000035315159,0.000260401,0.00032644434,0.00000847814],"category_scores_gemma":[0.0013337733,0.00017605639,0.000059651346,0.00046579685,0.00022919882,0.000006139227,0.0003146427,0.0001338046,0.000003848418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012490683,0.000051013598,0.056063764,0.0000066106163,0.000047832633,0.000005001979,0.00007316028,0.0000058907326,0.88131243,0.00089921773,0.0000035841672,0.061406612],"study_design_scores_gemma":[0.0008283701,0.00036753435,0.045312148,0.000031165295,0.0000066721377,0.000013402021,0.00010643297,0.0000033294723,0.94685334,0.0054253824,0.0007872946,0.00026495478],"about_ca_topic_score_codex":0.000019728337,"about_ca_topic_score_gemma":0.000035832676,"teacher_disagreement_score":0.06982822,"about_ca_system_score_codex":0.0000397077,"about_ca_system_score_gemma":0.000037158763,"threshold_uncertainty_score":0.7179372},"labels":[],"label_agreement":null},{"id":"W2548649142","doi":"10.1007/978-1-4939-6581-6_15","title":"Simultaneous Analysis of Multiple Lumenal Parameters of Individual Phagosomes Using High-Content Imaging","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Phagosome; Cell biology; Biological system; Phagocytosis; Chemistry; Biology","score_opus":0.03610431398721394,"score_gpt":0.3540357435138658,"score_spread":0.3179314295266519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548649142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5756943,0.0027354045,0.42090523,0.000030334788,0.00041764157,0.00012194621,0.000070415284,0.0000106935295,0.000013981992],"genre_scores_gemma":[0.6855547,0.000039328872,0.31424913,0.00007225434,0.0000032629891,0.000009374799,0.00002943912,0.0000143754505,0.000028138138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99638575,0.001960294,0.000752512,0.00042831968,0.000042616222,0.00043053157],"domain_scores_gemma":[0.9968474,0.0021168913,0.00042882236,0.00047699705,0.0001142925,0.000015623042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012583034,0.0002193661,0.0008830235,0.00075226504,0.00003058367,0.0000027770336,0.0004513401,0.00026858287,0.00017288615],"category_scores_gemma":[0.0012625763,0.00016333797,0.00027970184,0.0005684783,0.00079976476,0.000030628034,0.00024073209,0.00017997192,0.000003119515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012675868,0.00007685482,0.03509487,0.000010482755,0.0018249108,0.000010838025,0.00016802184,0.0007823963,0.89194554,0.00020065966,0.0000016918505,0.06975695],"study_design_scores_gemma":[0.001527347,0.00010588919,0.002277637,0.00003647495,0.00068299955,0.000011944204,0.00011750048,0.0003847928,0.9940939,0.00043889118,0.00012643092,0.00019622473],"about_ca_topic_score_codex":0.0004949318,"about_ca_topic_score_gemma":0.000017664406,"teacher_disagreement_score":0.10986036,"about_ca_system_score_codex":0.00007839662,"about_ca_system_score_gemma":0.00005477571,"threshold_uncertainty_score":0.6660729},"labels":[],"label_agreement":null},{"id":"W2548691982","doi":"10.1007/978-1-4939-6581-6_8","title":"Quantitative Immunofluorescence to Study Phagosome Maturation","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Canadian Institutes of Health Research","keywords":"Phagosome; Phagocytosis; Cell biology; Immunofluorescence; Endosome; Biology; Flow cytometry; Chemistry; Antibody; Immunology; Intracellular","score_opus":0.0232748816400461,"score_gpt":0.3847877431437434,"score_spread":0.3615128615036973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2548691982","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4164156,0.00033016558,0.58262175,0.00013712345,0.00013082681,0.00027901737,0.0000045956044,0.000008180141,0.000072738425],"genre_scores_gemma":[0.6208758,0.0000483979,0.37850657,0.0001999264,0.000036586345,0.00008703107,0.00013043781,0.000021795628,0.000093461604],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808186,0.0007766167,0.00029629457,0.00050821627,0.00006931152,0.00026768574],"domain_scores_gemma":[0.99938077,0.000039816252,0.000059801143,0.0003899809,0.00006947349,0.000060134185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000854457,0.00017083358,0.00020002662,0.00012129083,0.00003746529,0.000008312628,0.00023145291,0.00016273229,0.00003711724],"category_scores_gemma":[0.00027251468,0.00012735584,0.00007394983,0.00019077763,0.0000695696,0.0000035887222,0.000079346006,0.00007326847,0.000018132623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031385582,0.000104182574,0.0065125045,0.0000024131837,0.000040616666,0.000012996437,0.00012731497,0.0000054114817,0.9776814,0.00095511583,0.0000029273788,0.014241259],"study_design_scores_gemma":[0.0008413313,0.001411834,0.01096655,0.0000121149515,0.00001586071,0.0000057319794,0.00010976026,0.000012141891,0.9818805,0.0013087766,0.0031912918,0.0002441468],"about_ca_topic_score_codex":0.000025739953,"about_ca_topic_score_gemma":0.0000357174,"teacher_disagreement_score":0.2044602,"about_ca_system_score_codex":0.000020402187,"about_ca_system_score_gemma":0.000027875918,"threshold_uncertainty_score":0.51934206},"labels":[],"label_agreement":null},{"id":"W2549188597","doi":"10.1007/978-1-4939-6937-1_14","title":"Quantitative Monitoring of Subcellular Redox Dynamics in Living Mammalian Cells Using RoGFP2-Based Probes","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"KU Leuven","keywords":"Redox; Cell biology; Organelle; Cytosol; Peroxisome; Mitochondrion; Reactive oxygen species; Hydrogen peroxide; Subcellular localization; Chemistry; Biochemistry; Green fluorescent protein; Biology; Biophysics; Cytoplasm; Enzyme; Receptor","score_opus":0.038473519083269556,"score_gpt":0.41680962695190327,"score_spread":0.3783361078686337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2549188597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6611138,0.0008467561,0.33732182,0.000030618197,0.00027075043,0.0002021915,0.000016503838,0.0000042830916,0.00019329961],"genre_scores_gemma":[0.57282,0.00004593439,0.42700902,0.000015338948,0.00002836713,0.000016853131,0.000022964748,0.000020203479,0.000021320073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968337,0.0015410433,0.0004938182,0.00061947637,0.000065808104,0.00044616437],"domain_scores_gemma":[0.9985121,0.00014094565,0.00040802255,0.0007850902,0.00009959231,0.000054234722],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015610723,0.0002726077,0.00046723476,0.00020577798,0.00011411915,0.000019612738,0.0006352153,0.0005221957,0.0000060669236],"category_scores_gemma":[0.0010969192,0.00027223086,0.00014094697,0.00012017718,0.00058265805,0.000007789594,0.00030258333,0.00027041155,7.861745e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000905577,0.000068082365,0.22093084,0.000034893397,0.000030241014,0.00002320946,0.000035629324,0.00060588575,0.7758829,0.00077228097,4.6703246e-7,0.0015249972],"study_design_scores_gemma":[0.00045921883,0.000375422,0.012224105,0.0001274339,0.000015859456,0.0000034872758,0.00022454909,0.004125917,0.9813569,0.00075145223,0.000056976154,0.00027864016],"about_ca_topic_score_codex":0.00034499413,"about_ca_topic_score_gemma":0.00018033732,"teacher_disagreement_score":0.20870674,"about_ca_system_score_codex":0.000066644236,"about_ca_system_score_gemma":0.00010108052,"threshold_uncertainty_score":0.999973},"labels":[],"label_agreement":null},{"id":"W2549882751","doi":"10.1007/978-1-4939-6630-1_6","title":"Analytical Ultracentrifuge Analysis of Nucleosomes Assembled from Recombinant, Acid-Extracted, HPLC-Purified Histones","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Ultracentrifuge; Histone; Nucleosome; Chemistry; Recombinant DNA; Chromatography; Biochemistry; Acetylation; Epigenetics; DNA; Gene","score_opus":0.013800552507435181,"score_gpt":0.34738970242760964,"score_spread":0.33358914992017447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2549882751","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64932686,0.00070824695,0.34913287,0.00014985242,0.00017985459,0.00011207968,0.00006499425,0.0000091757665,0.00031608422],"genre_scores_gemma":[0.6961284,0.00055100344,0.30261862,0.00014012695,0.000039463972,0.000020609743,0.0002455667,0.000037159407,0.0002190267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99719846,0.00086869707,0.00069893285,0.00071648497,0.00009559655,0.00042184372],"domain_scores_gemma":[0.9984901,0.00018682402,0.0003034665,0.0008051725,0.00011089629,0.00010354075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007858964,0.00028158558,0.0007415635,0.00035648147,0.00003353088,0.000010641857,0.00046272555,0.00052180805,0.000109002656],"category_scores_gemma":[0.00065700087,0.00022000704,0.00040097328,0.00052562833,0.00017382935,0.0000037906602,0.00016871752,0.00012996797,0.0000043286223],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009926057,0.00014619877,0.025898265,0.000006156239,0.00086006743,0.0000105531835,0.000019619245,0.000035112942,0.9580466,0.0025420783,0.000022475893,0.012313622],"study_design_scores_gemma":[0.0012493957,0.00025485203,0.02538558,0.000018414974,0.00058284757,0.0000051033644,0.00003056454,0.0016056146,0.9616378,0.003791324,0.0050001466,0.00043833462],"about_ca_topic_score_codex":0.000107979315,"about_ca_topic_score_gemma":0.000075760414,"teacher_disagreement_score":0.04680157,"about_ca_system_score_codex":0.000050193386,"about_ca_system_score_gemma":0.00007703092,"threshold_uncertainty_score":0.8971627},"labels":[],"label_agreement":null},{"id":"W2550229258","doi":"10.1007/978-1-4939-6536-6_20","title":"Analyzing Prokaryotic RNA-Seq Data: A Case Study Identifying Holo-Fur Regulated Genes in Campylobacter jejuni","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Campylobacter jejuni; Biology; Gene; RNA-Seq; Campylobacter; Computational biology; Genetics; Microbiology; Bacteria; Gene expression; Transcriptome","score_opus":0.06324907958397458,"score_gpt":0.40586810079752084,"score_spread":0.34261902121354626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550229258","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8682622,0.0026592107,0.12801023,0.00012209309,0.0002902874,0.00053950446,0.000030435789,0.000007687415,0.00007836802],"genre_scores_gemma":[0.88493955,0.0003633874,0.1142685,0.000101431186,0.000086165295,0.00007688773,0.000035963218,0.000043955064,0.00008415264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955102,0.0020153287,0.0006364962,0.0011807196,0.00007354866,0.00058367837],"domain_scores_gemma":[0.99819297,0.00011990738,0.00016980339,0.0013538871,0.000081895865,0.00008153025],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024419574,0.0003433871,0.0004995606,0.00027747295,0.00007835829,0.000024029225,0.0006248107,0.00028690876,0.00001128284],"category_scores_gemma":[0.00053796166,0.00026694164,0.0000909702,0.00035856082,0.0001800359,0.0000037731133,0.0011290262,0.00015628742,0.0000034085035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004662942,0.00017712993,0.10362958,0.0000114403,0.00016298372,0.00085299485,0.00013676575,0.000024820643,0.86449206,0.00003679011,0.0000085054735,0.030420301],"study_design_scores_gemma":[0.009354077,0.0024118219,0.05156691,0.00014835408,0.00037288244,0.0024704859,0.0034307716,0.0004526655,0.9169569,0.0048953765,0.0053073014,0.0026324673],"about_ca_topic_score_codex":0.00035266057,"about_ca_topic_score_gemma":0.00091568526,"teacher_disagreement_score":0.05246483,"about_ca_system_score_codex":0.000044307257,"about_ca_system_score_gemma":0.0000785512,"threshold_uncertainty_score":0.9999783},"labels":[],"label_agreement":null},{"id":"W2550287202","doi":"10.1007/978-1-4939-6630-1_9","title":"Production and Purification of Antibodies Against Histone Modifications","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal; Hôpital Maisonneuve-Rosemont; Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Polyclonal antibodies; Histone; Antibody; Computational biology; Chromatin; Monoclonal antibody; Biology; Molecular biology; Chemistry; Biochemistry; Genetics; DNA","score_opus":0.031870166038366524,"score_gpt":0.3695413158360157,"score_spread":0.3376711497976492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550287202","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5317668,0.0014727636,0.46543095,0.0004191216,0.00009153571,0.00018010347,0.000011106985,0.000007463854,0.0006202016],"genre_scores_gemma":[0.64621526,0.0007949374,0.35261217,0.000058717455,0.000038187154,0.00005518118,0.00002370934,0.000012015971,0.00018984416],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987757,0.00046444882,0.00023580155,0.0003467687,0.000034334396,0.00014294192],"domain_scores_gemma":[0.9994292,0.000027452863,0.0001090021,0.00033149787,0.00007356812,0.000029276613],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066316023,0.00010079153,0.00014740942,0.00009686686,0.00002847069,0.0000025031388,0.000104539555,0.00015068133,0.000004237201],"category_scores_gemma":[0.000806877,0.000078161305,0.00003836618,0.00009150569,0.00025548783,0.000002679828,0.00006103909,0.000043838554,0.0000012412722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021396414,0.000031529995,0.002454578,0.000013700132,0.000013308905,3.2745893e-7,0.000031519798,0.0000030682752,0.9477816,0.0024229758,0.000018615203,0.047207333],"study_design_scores_gemma":[0.00017069923,0.000082992345,0.0023210186,0.0000190946,0.0000060922016,0.00000549525,0.00001672847,0.000008950077,0.9918122,0.0027777364,0.0026746858,0.00010425314],"about_ca_topic_score_codex":0.000006044097,"about_ca_topic_score_gemma":0.0000047793355,"teacher_disagreement_score":0.11444848,"about_ca_system_score_codex":0.000011108899,"about_ca_system_score_gemma":0.000028391501,"threshold_uncertainty_score":0.31873256},"labels":[],"label_agreement":null},{"id":"W2550343378","doi":"10.1007/978-1-4939-6655-4_5","title":"Affinity Purification–Mass Spectroscopy Methods for Identifying Epstein–Barr Virus–Host Interactions","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"","keywords":"Tandem affinity purification; Computational biology; Function (biology); Protein–protein interaction; Chemistry; Virus; Biology; Affinity chromatography; Biochemistry; Cell biology; Virology","score_opus":0.1030011998645216,"score_gpt":0.525001033067467,"score_spread":0.42199983320294543,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550343378","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0070650303,0.0008343649,0.9864921,0.0024959084,0.0005014525,0.00091187924,0.00003812871,0.00006642032,0.0015947281],"genre_scores_gemma":[0.0058867326,0.0002519781,0.99183786,0.00048041248,0.00015835879,0.00043013273,0.000022587823,0.000054313983,0.0008776324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99597895,0.0019771087,0.00060123135,0.0006871536,0.00011757834,0.0006379687],"domain_scores_gemma":[0.9968999,0.0018271847,0.00015220598,0.00072025246,0.00021133813,0.00018913191],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004204704,0.0002473292,0.0006070137,0.0005666758,0.00013011887,0.000034485147,0.0002959293,0.00026449974,0.00057491526],"category_scores_gemma":[0.003624812,0.0001825532,0.00027321602,0.00049172767,0.00037611133,0.00008284549,0.000119999466,0.0004204257,0.00006676083],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027016047,0.00010975219,0.0007996314,0.000044694258,0.000092723516,0.000010831463,0.0000678108,4.1678683e-7,0.9006056,0.008509421,0.00009062154,0.08939832],"study_design_scores_gemma":[0.0012629125,0.00024383052,0.00080538867,0.000066317996,0.000053180585,0.0000226496,0.000043526292,0.00017269902,0.8897488,0.018457599,0.08892531,0.00019778655],"about_ca_topic_score_codex":0.00008687167,"about_ca_topic_score_gemma":0.00004082965,"teacher_disagreement_score":0.089200534,"about_ca_system_score_codex":0.0002865634,"about_ca_system_score_gemma":0.00017531337,"threshold_uncertainty_score":0.7444303},"labels":[],"label_agreement":null},{"id":"W2550349656","doi":"10.1007/978-1-4939-6630-1_14","title":"High-Resolution Genome-Wide Mapping of Nucleosome Positioning and Occupancy Level Using Paired-End Sequencing Technology","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"","keywords":"Nucleosome; Chromatin; DNA sequencing; Computational biology; Genome; Biology; DNA; Genetics; Computer science; Gene","score_opus":0.027897777321404582,"score_gpt":0.31135863516175977,"score_spread":0.2834608578403552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550349656","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50598234,0.00065932353,0.49306694,0.000089945985,0.000058748956,0.000087771856,0.000021724441,0.000007709846,0.000025499385],"genre_scores_gemma":[0.50866276,0.00010034713,0.49110213,0.0000616995,0.000019743422,0.0000074397053,0.000018867777,0.000018129478,0.000008889729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998282,0.00036201018,0.00044680282,0.0004905003,0.000051038172,0.0003676136],"domain_scores_gemma":[0.999223,0.000054773544,0.00022125461,0.00037365957,0.00007957147,0.000047765174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006919485,0.0002036042,0.00032930588,0.00029070178,0.000070031354,0.000007859697,0.00020905308,0.0004051204,0.0000073492856],"category_scores_gemma":[0.0003353353,0.0001811365,0.000069980335,0.00021825363,0.00030397286,0.0000048537227,0.00030480602,0.00010791113,6.368935e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017373344,0.000014293988,0.0121764075,0.000023073444,0.000048647507,0.000006842146,0.000028870238,0.00018795654,0.97732466,0.0024667813,5.970108e-7,0.0077044736],"study_design_scores_gemma":[0.0010959428,0.00031046243,0.009280937,0.00011591244,0.000032883498,0.00010885497,0.00015579727,0.0015688915,0.96711624,0.01942625,0.0003269432,0.0004609022],"about_ca_topic_score_codex":0.000056146924,"about_ca_topic_score_gemma":0.0000141108,"teacher_disagreement_score":0.01695947,"about_ca_system_score_codex":0.00008562979,"about_ca_system_score_gemma":0.000085018924,"threshold_uncertainty_score":0.7386532},"labels":[],"label_agreement":null},{"id":"W2550586079","doi":"10.1007/978-1-4939-6630-1_2","title":"An Assay for Measuring Histone Variant Exchange within Nucleosomes In Vitro","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin; Histone; Nucleosome; In vitro; Chromatin remodeling; Biology; Solenoid; Histone code; Cell biology; Molecular biology; Histone H2A; Chemistry; Recombinant DNA; Gene; Biochemistry","score_opus":0.020900931975794904,"score_gpt":0.34586348685851875,"score_spread":0.32496255488272385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550586079","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32266778,0.0005644714,0.6759884,0.00011030412,0.00021985464,0.00025252628,0.000031405292,0.000009861718,0.00015544062],"genre_scores_gemma":[0.31576023,0.00007596423,0.6835076,0.00024411762,0.00007232498,0.00013035173,0.000064897395,0.000046207315,0.000098269484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997646,0.00086234696,0.00039726883,0.00060935447,0.00005240778,0.0004326327],"domain_scores_gemma":[0.99910855,0.000098839395,0.00013330384,0.00052634935,0.000053929514,0.00007905079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002303607,0.00021980805,0.00031702747,0.00015631478,0.00003530413,0.000011369254,0.00036334025,0.00035687353,0.000006166473],"category_scores_gemma":[0.00062164245,0.0001800286,0.000099304474,0.000106149884,0.00010706957,0.0000038789294,0.00012667653,0.00009421448,0.0000014725257],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008204337,0.00007761128,0.0003981574,0.000018834558,0.000024157609,0.000011750509,0.000081968064,0.000049680635,0.9734288,0.0011055418,0.000007847538,0.024713594],"study_design_scores_gemma":[0.0013456024,0.00031339176,0.00038375595,0.000017380662,0.000011203198,0.000022320435,0.000046234385,0.0014423582,0.9851896,0.007201548,0.0037705048,0.00025611193],"about_ca_topic_score_codex":0.00003194273,"about_ca_topic_score_gemma":0.00007446019,"teacher_disagreement_score":0.024457483,"about_ca_system_score_codex":0.000072439594,"about_ca_system_score_gemma":0.00006673964,"threshold_uncertainty_score":0.7341353},"labels":[],"label_agreement":null},{"id":"W2550959114","doi":"10.1007/978-1-4939-6584-7_14","title":"Large-Scale Interaction Profiling of Protein Domains Through Proteomic Peptide-Phage Display Using Custom Peptidomes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Profiling (computer programming); Computational biology; Phage display; Peptide; Biology; Computer science; Biochemistry; Operating system","score_opus":0.02297253142674514,"score_gpt":0.4033009421261765,"score_spread":0.38032841069943135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2550959114","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39353088,0.000048764512,0.6052859,0.00005684553,0.000018623015,0.00043150943,0.000031458,0.000047846126,0.000548185],"genre_scores_gemma":[0.13079552,0.000021363245,0.8684028,0.00002381371,0.000035658184,0.00055538194,0.00001422566,0.000037095328,0.000114156144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983087,0.0002488403,0.0005151508,0.0004898148,0.000070743095,0.00036671766],"domain_scores_gemma":[0.99893296,0.00011038229,0.00033503157,0.0005208192,0.00006299875,0.00003778147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005696431,0.00021661542,0.0003601584,0.000086890504,0.000065129076,0.0000070368496,0.00027448125,0.00027159252,0.00008308596],"category_scores_gemma":[0.00020690146,0.00016703122,0.000125963,0.00018490947,0.0001690858,0.000094165895,0.00018367177,0.00026465202,0.0000029166063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046211975,0.00008007328,0.0009937701,0.000065901724,0.000017125842,0.0000033228703,0.000099444005,0.00002398462,0.9844573,0.011335247,7.447175e-7,0.002876833],"study_design_scores_gemma":[0.00047274178,0.000034348424,0.0000069438593,0.00016664146,0.000012941437,0.000012917207,0.00010771028,0.0005311928,0.95274544,0.044673976,0.0010350877,0.00020008661],"about_ca_topic_score_codex":0.000028280161,"about_ca_topic_score_gemma":0.0000046050127,"teacher_disagreement_score":0.2631169,"about_ca_system_score_codex":0.00014700378,"about_ca_system_score_gemma":0.000043395386,"threshold_uncertainty_score":0.68113357},"labels":[],"label_agreement":null},{"id":"W2551893300","doi":"10.1007/978-1-4939-6630-1_3","title":"Purification of Yeast Native Reagents for the Analysis of Chromatin Function-I: Nucleosomes for Reconstitution and Manipulation of Histone Marks","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research","keywords":"Chromatin; Histone; Histone-modifying enzymes; Nucleosome; Yeast; Biology; Chromatin remodeling; Saccharomyces cerevisiae; Cell biology; Histone code; Biochemistry; Computational biology; Genetics; DNA","score_opus":0.020987041307400086,"score_gpt":0.3645072384933172,"score_spread":0.3435201971859171,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2551893300","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3733755,0.00031021552,0.6258855,0.000039685558,0.00004691096,0.00023742736,0.000082676925,8.2914494e-7,0.000021280379],"genre_scores_gemma":[0.7346023,0.00011929112,0.26507163,0.000010861876,0.000008699986,0.000053339652,0.00010696429,0.0000062312943,0.000020716894],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991849,0.0001622026,0.00035119627,0.0001914852,0.00002947238,0.000080747064],"domain_scores_gemma":[0.99914944,0.00014422188,0.00034006112,0.00021578949,0.00013902833,0.000011474726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000706611,0.00007561092,0.0002229608,0.00012655395,0.000022387776,0.0000013580346,0.00009136822,0.00012723118,0.000003891637],"category_scores_gemma":[0.0003678539,0.000053150405,0.00011268953,0.00013200974,0.00018751407,0.0000021010428,0.00003168055,0.000017233258,2.3086614e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119063516,0.000027116577,0.0012560447,0.000034097327,0.00033474975,1.544293e-8,0.00003316924,0.0002275428,0.9600708,0.0050667045,0.000004125307,0.03282656],"study_design_scores_gemma":[0.00091042183,0.0003742909,0.03169007,0.000021549906,0.00050407107,9.897121e-7,0.00008238612,0.010136736,0.94991857,0.0055542463,0.0006888255,0.000117830954],"about_ca_topic_score_codex":0.000018509378,"about_ca_topic_score_gemma":0.000029758043,"teacher_disagreement_score":0.36122677,"about_ca_system_score_codex":0.000014358734,"about_ca_system_score_gemma":0.000025910846,"threshold_uncertainty_score":0.21674106},"labels":[],"label_agreement":null},{"id":"W2552723318","doi":"10.1007/978-1-4939-6442-0_15","title":"Rapid SNP Detection and Genotyping of Bacterial Pathogens by Pyrosequencing","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Biology; Genotyping; Pyrosequencing; Bacillus anthracis; Genetics; SNP genotyping; Virulence; Typing; Genome; Single-nucleotide polymorphism; Whole genome sequencing; Computational biology; Shiga toxin; Multilocus sequence typing; Gene; Genotype; Bacteria","score_opus":0.02402633413796595,"score_gpt":0.3635963298878463,"score_spread":0.33956999574988034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2552723318","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48807,0.0025964682,0.50893164,0.000053989545,0.0000873892,0.00012059522,0.000015575373,0.000005339364,0.00011898218],"genre_scores_gemma":[0.7073671,0.0018190405,0.2904745,0.00010365852,0.000084830936,0.00006466005,0.00001528621,0.000030329724,0.000040568895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980444,0.00095559115,0.00025424844,0.00039320934,0.00005265647,0.00029991474],"domain_scores_gemma":[0.9994501,0.00009552838,0.00009013784,0.00024667283,0.00006754928,0.00005001162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010482917,0.00014410773,0.00023564557,0.00007774922,0.000039211234,0.000005053268,0.00013129321,0.00021257866,0.000013093064],"category_scores_gemma":[0.0011403663,0.00011007726,0.000057108384,0.000109122186,0.00027480724,0.000002703222,0.00024376494,0.000078866615,4.87453e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007414026,0.000013100415,0.00066358736,0.000012718534,0.000039073715,0.000001942709,0.000020755178,3.5448485e-7,0.8909736,0.000094601775,0.000007180683,0.108098924],"study_design_scores_gemma":[0.00052418624,0.0003489708,0.00060006103,0.000012947403,0.000007802317,0.000007271119,0.000021341966,0.000014844304,0.99100244,0.0005684317,0.0067536295,0.00013808408],"about_ca_topic_score_codex":0.000024017812,"about_ca_topic_score_gemma":0.00002459542,"teacher_disagreement_score":0.21929711,"about_ca_system_score_codex":0.000023530038,"about_ca_system_score_gemma":0.000038552742,"threshold_uncertainty_score":0.448882},"labels":[],"label_agreement":null},{"id":"W2552976290","doi":"10.1007/978-1-4939-6536-6_2","title":"Recovery of Campylobacter spp. from Food and Environmental Sources","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada; Canadian Food Inspection Agency","funders":"","keywords":"Campylobacter; Isolation (microbiology); Biology; Bacteria; Campylobacter jejuni; Microbiology; Antimicrobial; Food science","score_opus":0.021992747736020564,"score_gpt":0.28958473202673335,"score_spread":0.2675919842907128,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2552976290","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.985805,0.0012672163,0.0121163195,0.00036858174,0.00009572393,0.00008727667,0.00013697318,0.000011532318,0.00011141171],"genre_scores_gemma":[0.95014906,0.00036152717,0.04894421,0.00039044803,0.0000649007,0.000011774601,0.0000430369,0.0000015611454,0.000033505872],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793303,0.0011147872,0.0002958175,0.00037249163,0.00003737663,0.0002464746],"domain_scores_gemma":[0.9985915,0.0011484774,0.00011565935,0.00008445115,0.0000056790104,0.00005425531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054600765,0.00013654874,0.00032982277,0.000018881346,0.000021689393,0.000003698865,0.00017306163,0.00022008251,0.00034451284],"category_scores_gemma":[0.00018876816,0.000046764024,0.00008094174,0.00006942337,0.00022952925,0.000026221269,0.00013502367,0.00006957088,0.000005828879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024402878,0.00001847016,0.14938678,6.875032e-7,0.00001636687,0.000001521684,0.000009973979,1.11171644e-7,0.7077469,0.00011040282,0.000005067477,0.1426793],"study_design_scores_gemma":[0.00040137264,0.0008682223,0.44614494,0.000023167682,0.000018988454,0.000012010612,0.00013024615,0.0000047141602,0.4941351,0.04980566,0.008175123,0.00028045004],"about_ca_topic_score_codex":0.00016904743,"about_ca_topic_score_gemma":0.00006287127,"teacher_disagreement_score":0.29675815,"about_ca_system_score_codex":0.000015496755,"about_ca_system_score_gemma":0.0000026156717,"threshold_uncertainty_score":0.37721738},"labels":[],"label_agreement":null},{"id":"W2553469879","doi":"10.1007/978-1-4939-6630-1_10","title":"Immunofluorescence of Histone Proteins","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research; Bayerische Forschungsallianz; Alberta Cancer Foundation","keywords":"Immunofluorescence; Histone; Cell biology; Indirect immunofluorescence; Biology; Cell cycle; Computational biology; Cell; Genetics; Gene; Antibody","score_opus":0.010011544682140362,"score_gpt":0.3592037962549666,"score_spread":0.34919225157282624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553469879","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30999377,0.00082587794,0.6883439,0.00009830812,0.00010045892,0.00014658431,0.000011599566,0.000004506646,0.00047501505],"genre_scores_gemma":[0.28541017,0.00020224317,0.7140076,0.000081489896,0.000023109991,0.000037712358,0.000014470346,0.000020994226,0.00020218898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986557,0.00039935752,0.00032271747,0.00033327393,0.000043938635,0.00024504052],"domain_scores_gemma":[0.99925375,0.000030511444,0.00012821768,0.0004928149,0.000058423004,0.000036305686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061471865,0.000138131,0.0002257673,0.0000753471,0.000016395465,0.0000023066198,0.00031660954,0.00021141424,0.000021855483],"category_scores_gemma":[0.0003364288,0.00010354887,0.00009212446,0.00009374795,0.00022289866,0.0000011155158,0.000185709,0.00005995073,0.0000028657084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034294473,0.000040798845,0.0018490782,0.000010012618,0.000021844766,0.0000025457516,0.000011677276,0.0000059268386,0.9690565,0.0028758317,0.000011478875,0.026080046],"study_design_scores_gemma":[0.0004716446,0.00026543927,0.0009500693,0.000019093428,0.0000054202733,0.000009806911,0.000007686043,0.000028112732,0.99020743,0.004078673,0.0038041077,0.00015251637],"about_ca_topic_score_codex":0.000022971995,"about_ca_topic_score_gemma":0.000009722143,"teacher_disagreement_score":0.025927529,"about_ca_system_score_codex":0.000025278865,"about_ca_system_score_gemma":0.000062103274,"threshold_uncertainty_score":0.42226002},"labels":[],"label_agreement":null},{"id":"W2553582070","doi":"10.1007/978-1-4939-6536-6_15","title":"Mouse Models for Campylobacter jejuni Colonization and Infection","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia","funders":"","keywords":"Campylobacter jejuni; Colonization; Microbiology; Campylobacter; Biology; Bacteria; Genetics","score_opus":0.045750601159275914,"score_gpt":0.3569457200536058,"score_spread":0.3111951188943299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553582070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5636503,0.00009799579,0.4351119,0.000731559,0.000094862466,0.00019018506,0.000014868567,0.000026508675,0.00008179068],"genre_scores_gemma":[0.76125556,0.0004616238,0.2361372,0.0014376905,0.0001576048,0.00020954912,0.00008105215,0.000004410908,0.00025533486],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99829614,0.0008181383,0.00023133887,0.00035586656,0.000024495159,0.00027401367],"domain_scores_gemma":[0.99895793,0.00079909334,0.00007908311,0.000061043866,0.000051385054,0.000051469957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009006102,0.00012399237,0.0002321422,0.000027355536,0.00005082354,0.000008734275,0.00009096962,0.0002524541,0.000037968555],"category_scores_gemma":[0.00042199163,0.000044151115,0.000057492256,0.0001411502,0.00009623887,0.000053731186,0.00005974897,0.00005349771,0.0000020691668],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031553773,0.000022499755,0.026213124,0.0000024712726,0.0000073325837,5.1159253e-7,0.000010675031,0.0000064241995,0.8359364,0.0066806823,0.000017815151,0.1310705],"study_design_scores_gemma":[0.0016842316,0.0019170868,0.09746184,0.000040530955,0.000047945647,0.000044139717,0.000037901114,0.0021306667,0.3519598,0.50096,0.042829372,0.00088651804],"about_ca_topic_score_codex":0.00013566582,"about_ca_topic_score_gemma":0.00017331824,"teacher_disagreement_score":0.4942793,"about_ca_system_score_codex":0.000027432825,"about_ca_system_score_gemma":0.000004435857,"threshold_uncertainty_score":0.19471572},"labels":[],"label_agreement":null},{"id":"W2553843805","doi":"10.1007/978-1-4939-6630-1_16","title":"A Method for Large-Scale Screening of Random Sequence Libraries to Determine the Function of Unstructured Regions from Essential Proteins","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Computational biology; DECIPHER; Biology; Function (biology); Sequence (biology); Yeast; Oligonucleotide; Computer science; Bioinformatics; Genetics; DNA","score_opus":0.016850849006453207,"score_gpt":0.32763077851832684,"score_spread":0.3107799295118736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2553843805","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.184817,0.00020176735,0.8139347,0.00026246556,0.00009209263,0.00049063144,0.00018187298,0.0000041903554,0.000015294823],"genre_scores_gemma":[0.14160307,0.000018351315,0.85796607,0.00013914284,0.000051320916,0.00010817116,0.000069089016,0.000019135765,0.000025687266],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829113,0.00067684066,0.0003914269,0.0003610213,0.000050971707,0.00022859035],"domain_scores_gemma":[0.99897194,0.00023227287,0.00021455891,0.0004525919,0.00008975212,0.00003887566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082631817,0.0001499886,0.00031893357,0.00006759393,0.00004330428,0.000006161443,0.0003131794,0.00021419248,0.000008178512],"category_scores_gemma":[0.00046467458,0.00009657869,0.00015679705,0.00012385532,0.00012933665,0.0000030083877,0.00019751418,0.000057509857,1.2434502e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049024745,0.000019569736,0.0002992832,0.000013251205,0.00007255194,4.1962244e-7,0.00008828565,0.0001129064,0.9720278,0.002372504,0.000009518954,0.024493678],"study_design_scores_gemma":[0.0015453135,0.00034776947,0.00031147743,0.00002825348,0.00004425176,0.0000034837349,0.00005762205,0.0015209989,0.9739252,0.019808123,0.002276597,0.00013095544],"about_ca_topic_score_codex":0.000048416205,"about_ca_topic_score_gemma":0.000087160086,"teacher_disagreement_score":0.044031356,"about_ca_system_score_codex":0.000006984454,"about_ca_system_score_gemma":0.000060664035,"threshold_uncertainty_score":0.39383647},"labels":[],"label_agreement":null},{"id":"W2554340050","doi":"10.1007/978-1-4939-6630-1_4","title":"Purification of Yeast Native Reagents for the Analysis of Chromatin Function-II: Multiprotein Complexes and Biochemical Assays","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Hôtel-Dieu de Québec","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Chromatin; Tandem affinity purification; Histone; Yeast; Chromatin remodeling; Biology; Saccharomyces cerevisiae; Histone-modifying enzymes; Function (biology); Computational biology; Biochemistry; Cell biology; Enzyme; DNA; Affinity chromatography","score_opus":0.020740258251498295,"score_gpt":0.3587245799599552,"score_spread":0.33798432170845694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2554340050","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40585634,0.00078631233,0.59287846,0.00011339236,0.0000379814,0.00025796227,0.000056626737,0.0000022421482,0.000010696114],"genre_scores_gemma":[0.83382964,0.00008222872,0.16580147,0.00002019054,0.000024555377,0.00009287467,0.00010673296,0.000010621424,0.000031699466],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879605,0.00038076198,0.00033822563,0.00030468835,0.00005641254,0.00012385285],"domain_scores_gemma":[0.99913085,0.00015802568,0.0002442992,0.00031196323,0.00013376896,0.00002108541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007664711,0.000107390835,0.00024824592,0.00015162473,0.000035003304,0.0000019800343,0.00012689082,0.00020326291,0.0000093457265],"category_scores_gemma":[0.00060870324,0.000072073686,0.00012406988,0.00030277637,0.00027502666,0.000002038803,0.00008372617,0.000037929844,9.7120974e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013460111,0.000032260272,0.00066003227,0.000011140004,0.0004924441,3.4444692e-8,0.00003542642,0.000110097746,0.9622667,0.00050054264,0.000019012212,0.035737745],"study_design_scores_gemma":[0.00056120707,0.00019584096,0.010705014,0.000012811949,0.00023110265,7.392531e-7,0.00002205288,0.0013123108,0.98521066,0.00080698694,0.00085590006,0.0000853907],"about_ca_topic_score_codex":0.000041758776,"about_ca_topic_score_gemma":0.000025477973,"teacher_disagreement_score":0.42797327,"about_ca_system_score_codex":0.000017748262,"about_ca_system_score_gemma":0.000027793674,"threshold_uncertainty_score":0.29390797},"labels":[],"label_agreement":null},{"id":"W2554848559","doi":"10.1007/978-1-4939-6421-5_21","title":"Measuring Molecular Forces Using Calibrated Optical Tweezers in Living Cells","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of General Medical Sciences","keywords":"Optical tweezers; Living cell; Dynein; Kinesin; Calibration; Refractive index; Molecular motor; Biophysics; Viscoelasticity; Living systems; Measure (data warehouse); Biological system; Nanotechnology; Physics; Chemistry; Optics; Biology; Microtubule; Materials science; Cell biology; Computer science; Ecology","score_opus":0.027089250484248872,"score_gpt":0.33919695022833735,"score_spread":0.3121076997440885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2554848559","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46070245,0.00054256327,0.5382044,0.000048977643,0.00012883474,0.00015658286,0.000004556105,0.000010499126,0.00020115775],"genre_scores_gemma":[0.4990735,0.0001403482,0.50025964,0.00032649442,0.000046957408,0.00003053386,0.000010552144,0.00005880737,0.000053124808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676484,0.0011730992,0.000516989,0.0007677314,0.000089791516,0.00068753556],"domain_scores_gemma":[0.99908584,0.0001259718,0.00011080316,0.0005110592,0.00005589678,0.00011044756],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012424788,0.00031641003,0.00040179587,0.0002552863,0.000035935856,0.000019127447,0.0003921928,0.00053164526,0.000013008867],"category_scores_gemma":[0.00055644003,0.00026536477,0.0001555444,0.00028795886,0.00020223625,0.0000074230684,0.00035217867,0.00019356239,0.0000031716863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034270703,0.000055359254,0.004893127,0.00001494461,0.000041318755,0.00004502811,0.000025868267,0.0004523024,0.98787314,0.0007152218,0.0000035965713,0.005845821],"study_design_scores_gemma":[0.00057698356,0.0001266695,0.00020507125,0.00010097071,0.000017203045,0.000023620523,0.0000324625,0.00077653927,0.996294,0.0006509997,0.00080676813,0.00038867936],"about_ca_topic_score_codex":0.00011856487,"about_ca_topic_score_gemma":0.00008594926,"teacher_disagreement_score":0.038371082,"about_ca_system_score_codex":0.0000773205,"about_ca_system_score_gemma":0.000105787345,"threshold_uncertainty_score":0.99997985},"labels":[],"label_agreement":null},{"id":"W2554971317","doi":"10.1007/978-1-4939-6536-6_14","title":"Using Galleria mellonella as an Infection Model for Campylobacter jejuni Pathogenesis","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Invertebrate Immune Response Mechanisms","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Galleria mellonella; Campylobacter jejuni; Microbiology; Biology; Virulence; Pathogen; Colonization; Virology; Bacteria","score_opus":0.05483110799381874,"score_gpt":0.39452448986813193,"score_spread":0.3396933818743132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2554971317","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31410056,0.00028657244,0.6844763,0.000062911626,0.0006089921,0.00033672148,0.000020687186,0.00004812151,0.000059087746],"genre_scores_gemma":[0.14931911,0.000099574194,0.8490194,0.00047811112,0.000025147738,0.00015567045,0.00005895417,0.00007534115,0.0007686856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99497753,0.0033476937,0.00043625056,0.00060915784,0.000020430101,0.00060894625],"domain_scores_gemma":[0.99886394,0.0002982122,0.00015450767,0.00054038875,0.000109898356,0.000033032775],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018588196,0.00029416196,0.00046853907,0.00032301495,0.000121314995,0.000009973794,0.00025940262,0.0007823518,0.0002777357],"category_scores_gemma":[0.00052793085,0.00022400884,0.00016789175,0.00016744879,0.00019849872,0.00007519201,0.00012754728,0.0001221233,0.000060726452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039665063,0.00010023922,0.00016701448,0.000007882188,0.00008538678,0.0000050645194,0.00010493737,0.00010631436,0.9624695,0.015196157,0.00000673715,0.021354087],"study_design_scores_gemma":[0.001464435,0.00041054472,0.00004139135,0.000022168186,0.00004709594,0.000091667185,0.000016684022,0.0044535,0.9435079,0.04788842,0.0017290004,0.0003271524],"about_ca_topic_score_codex":0.00015031389,"about_ca_topic_score_gemma":0.000037486087,"teacher_disagreement_score":0.16478145,"about_ca_system_score_codex":0.0001259864,"about_ca_system_score_gemma":0.00013596179,"threshold_uncertainty_score":0.91348153},"labels":[],"label_agreement":null},{"id":"W2555837229","doi":"10.1007/978-1-4939-6630-1_13","title":"A Spiking Strategy for ChIP-chip Data Normalization in S. cerevisiae","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Chromatin immunoprecipitation; Normalization (sociology); Chip; DNA microarray; Histone; Chromatin; Database normalization; Epigenetics; Computational biology; ChIP-on-chip; ChIP-sequencing; Biology; Computer science; DNA; Genetics; Artificial intelligence; Cluster analysis; Histone H2A; Chromatin remodeling; Gene; Gene expression; Telecommunications","score_opus":0.04188599666134107,"score_gpt":0.3952585318222137,"score_spread":0.35337253516087264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555837229","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18006249,0.00070229574,0.8182765,0.0001352651,0.000121105455,0.0003086059,0.00007410926,0.0000067331907,0.0003128937],"genre_scores_gemma":[0.40719137,0.00034132265,0.59125274,0.0002681963,0.00010169826,0.0000704975,0.0006594275,0.000044778935,0.00006999325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808663,0.0004550132,0.00040605586,0.0006356759,0.00004018289,0.0003764387],"domain_scores_gemma":[0.9989291,0.00006751329,0.00012595627,0.0007917702,0.000040786377,0.000044867364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013182928,0.00018837849,0.00025286246,0.00011593083,0.000028761062,0.000014661401,0.0005657906,0.00029216876,0.000011119514],"category_scores_gemma":[0.00052713836,0.00015370897,0.000061795276,0.0001326873,0.00007565916,0.0000049939713,0.0003496821,0.000075451855,0.000001525846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003998358,0.000035520097,0.005423067,0.000022189697,0.000019579627,0.0000029924813,0.000011067409,0.0001718044,0.9323263,0.0035143045,0.000019566327,0.058413602],"study_design_scores_gemma":[0.0071855905,0.0013869025,0.011519173,0.00019328219,0.00006938727,0.00007034854,0.0001313187,0.020836473,0.85101473,0.05051163,0.05537605,0.0017050855],"about_ca_topic_score_codex":0.000026635957,"about_ca_topic_score_gemma":0.00015771648,"teacher_disagreement_score":0.2271289,"about_ca_system_score_codex":0.000028576345,"about_ca_system_score_gemma":0.00008099714,"threshold_uncertainty_score":0.62680703},"labels":[],"label_agreement":null},{"id":"W2555874899","doi":"10.1007/978-1-4939-6536-6_5","title":"Method of Peptide Nucleic Acid (PNA)-Mediated Antisense Inhibition of Gene Expression in Campylobacter jejuni","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Peptide nucleic acid; Campylobacter jejuni; Nucleic acid; Oligonucleotide; Gene; Gene knockdown; Campylobacter; Biology; Escherichia coli; Sense (electronics); Molecular biology; Peptide; Salmonella; Biochemistry; Gene expression; Microbiology; Chemistry; Bacteria; Genetics","score_opus":0.027729729173276447,"score_gpt":0.33970201512563447,"score_spread":0.31197228595235804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2555874899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8947964,0.0002764766,0.10402518,0.00037535757,0.00010097211,0.00019570885,0.000052501735,0.000017623628,0.00015981926],"genre_scores_gemma":[0.5528612,0.00015740018,0.44664207,0.00021380886,0.000035378922,0.0000202916,0.000051818348,0.0000030339388,0.000014967479],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99416435,0.004090669,0.000769924,0.00049080607,0.00008285021,0.00040142593],"domain_scores_gemma":[0.9978421,0.0015123163,0.00034482102,0.0001569675,0.00007573947,0.000068095054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023512363,0.00020631841,0.0006735784,0.00010246222,0.00001906496,0.000002499335,0.00023268697,0.00041719386,0.0002068995],"category_scores_gemma":[0.00093914603,0.00007967575,0.000150044,0.0005001342,0.00021007464,0.000047089463,0.00012937555,0.0001471126,0.000005533515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093687166,0.00010090218,0.047090013,0.000007748297,0.000008803346,0.00001539051,0.000042261978,0.0000018031062,0.903885,0.00021039008,0.000010406905,0.04853359],"study_design_scores_gemma":[0.0004478675,0.00029595266,0.07784686,0.000073582545,0.0000069648395,0.000014658039,0.00004914171,0.000015056682,0.915309,0.0053095575,0.0004708817,0.00016045185],"about_ca_topic_score_codex":0.00019364587,"about_ca_topic_score_gemma":0.000096300566,"teacher_disagreement_score":0.34261692,"about_ca_system_score_codex":0.000034344095,"about_ca_system_score_gemma":0.000012127407,"threshold_uncertainty_score":0.3249083},"labels":[],"label_agreement":null},{"id":"W2556056404","doi":"10.1007/978-1-4939-6630-1_12","title":"Chromatin Immunoprecipitation of Histone Modifications in Fission Yeast","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Chromatin immunoprecipitation; Schizosaccharomyces pombe; Chromatin; Histone; ChIP-on-chip; Histone code; Immunoprecipitation; Cell biology; Biology; Computational biology; Yeast; Genetics; Histone H1; DNA; Saccharomyces cerevisiae; Gene; Nucleosome; Promoter; Gene expression","score_opus":0.0141840302462867,"score_gpt":0.37598401055544733,"score_spread":0.3617999803091606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2556056404","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51668274,0.00040300205,0.48215297,0.00010994415,0.00007239626,0.00011190521,0.000014673705,0.0000031769139,0.00044917132],"genre_scores_gemma":[0.6190525,0.00014686081,0.38055152,0.000031610904,0.000011708979,0.000034816287,0.000046176086,0.000014241707,0.00011053655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862075,0.00046310152,0.00039695817,0.0002933356,0.000040682145,0.00018515352],"domain_scores_gemma":[0.9993569,0.000040268173,0.00014350933,0.00038444603,0.00004718143,0.000027677957],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060929306,0.00011737668,0.00020412133,0.00014097708,0.000015216045,0.000002501157,0.00020854874,0.00020604681,0.000016367812],"category_scores_gemma":[0.0003427875,0.000096071475,0.000061983344,0.00014157288,0.00011342028,0.0000021113965,0.00009701846,0.000058451045,0.000002696266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023328681,0.00006131641,0.0012689063,0.000009232647,0.000009693469,9.037395e-7,0.000046623998,0.00008675208,0.9714121,0.0018751251,0.000010124972,0.025195848],"study_design_scores_gemma":[0.0008285407,0.00017453432,0.009809179,0.00004680267,0.0000057570664,0.000005222913,0.0000405206,0.0005205657,0.9802899,0.0070222286,0.0010810533,0.00017573166],"about_ca_topic_score_codex":0.00003578895,"about_ca_topic_score_gemma":0.00003393812,"teacher_disagreement_score":0.102369785,"about_ca_system_score_codex":0.000044391167,"about_ca_system_score_gemma":0.000051545743,"threshold_uncertainty_score":0.3917681},"labels":[],"label_agreement":null},{"id":"W2556649475","doi":"10.1007/978-1-4939-6655-4_6","title":"The Use of 3D Telomere FISH for the Characterization of the Nuclear Architecture in EBV-Positive Hodgkin’s Lymphoma","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; CancerCare Manitoba; Jewish General Hospital","funders":"","keywords":"Telomere; Shelterin; Lymphoma; Biology; Fish <Actinopterygii>; Multinucleate; Cancer research; DNA; Immunology; Genetics; Cell biology; Gene; DNA-binding protein; Transcription factor","score_opus":0.04074512994720164,"score_gpt":0.37778662602531077,"score_spread":0.3370414960781091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2556649475","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7602168,0.00015963295,0.22893119,0.008902002,0.0001470734,0.0014128931,0.00012757923,0.00000715477,0.00009572751],"genre_scores_gemma":[0.7554689,0.0011697068,0.23798874,0.0040892875,0.00016186366,0.00033726415,0.000027017628,0.0001166175,0.00064059696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980495,0.0011026816,0.00030922456,0.00019240838,0.00010381074,0.00024235548],"domain_scores_gemma":[0.9975837,0.0017185708,0.00013192142,0.00044213113,0.000099873905,0.000023843982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011630353,0.000104090475,0.000271652,0.00010164057,0.000062802195,0.000007446767,0.00025896105,0.00014821874,0.000020321175],"category_scores_gemma":[0.0014278226,0.0000409929,0.00011507818,0.0002914237,0.00044366214,0.00001615323,0.00014246629,0.00014003819,6.075723e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004138449,0.000036943013,0.0020817874,0.00001530553,0.000041492847,0.000001692469,0.00018221492,0.0000030985714,0.69873285,0.0013221663,0.000009954586,0.29715863],"study_design_scores_gemma":[0.0028940036,0.00054176414,0.23953652,0.00024277852,0.000061553874,0.000024378547,0.00007238683,0.0007234156,0.62797564,0.002169786,0.12560003,0.00015775669],"about_ca_topic_score_codex":0.00013111856,"about_ca_topic_score_gemma":0.00011266875,"teacher_disagreement_score":0.29700089,"about_ca_system_score_codex":0.000052532396,"about_ca_system_score_gemma":0.000080794656,"threshold_uncertainty_score":0.17093402},"labels":[],"label_agreement":null},{"id":"W2557183592","doi":"10.1007/978-1-4939-6536-6_8","title":"Method for the Successful Crystallization of the Ferric Uptake Regulator from Campylobacter jejuni","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Campylobacter jejuni; Regulator; DNA; Transcription factor; Gene; Biology; DNA-binding protein; Genetics; Computational biology; Chemistry; Cell biology; Biochemistry; Bacteria","score_opus":0.01659045552672784,"score_gpt":0.350086356674866,"score_spread":0.33349590114813815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2557183592","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06885235,0.00021934764,0.9289923,0.0006235459,0.0008601958,0.0002969417,0.000046008878,0.000013397121,0.000095936826],"genre_scores_gemma":[0.0715561,0.000012794994,0.92779386,0.00034693378,0.00009659046,0.000057257115,0.0000058006685,0.00001577351,0.00011490073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978138,0.0013289361,0.00030024757,0.00029003076,0.00007453897,0.00019240417],"domain_scores_gemma":[0.9982642,0.0009648811,0.00018347084,0.0004890736,0.00007945021,0.000018923834],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014704246,0.00011644369,0.00020693519,0.000044185595,0.00006725984,0.000011004339,0.0003974186,0.00016316112,0.00024073473],"category_scores_gemma":[0.0006716098,0.000049789836,0.0000981261,0.00018919107,0.00015449755,0.00003580347,0.000101246944,0.000058650716,0.0000015246885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003897782,0.000008902517,0.0005726646,0.0000046703153,0.00001141873,1.6379597e-7,0.00005809241,0.00003824802,0.96621823,0.00831859,0.00003775885,0.024692258],"study_design_scores_gemma":[0.00033080528,0.000054526732,0.0039253645,0.000014134946,0.000033750297,0.0000019021516,0.000024148218,0.00017938043,0.9195072,0.0622898,0.013559062,0.000079946694],"about_ca_topic_score_codex":0.00014716045,"about_ca_topic_score_gemma":0.00008721996,"teacher_disagreement_score":0.05397121,"about_ca_system_score_codex":0.000030825107,"about_ca_system_score_gemma":0.00003428033,"threshold_uncertainty_score":0.26358765},"labels":[],"label_agreement":null},{"id":"W2558323451","doi":"10.1007/978-1-4939-6703-2_3","title":"Chromosome Preparation for Acute Lymphoblastic Leukemia","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Lymphoblastic Leukemia; Peripheral blood; Bone marrow; Chromosome; Medicine; Risk stratification; Leukemia; Acute leukemia; Biology; Pathology; Cancer research; Immunology; Internal medicine; Genetics","score_opus":0.024534087447277867,"score_gpt":0.4244710554822421,"score_spread":0.39993696803496426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558323451","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05992205,0.00014740063,0.9372364,0.00081023213,0.0002193479,0.0008567276,0.000023592356,0.000059827362,0.0007243668],"genre_scores_gemma":[0.058055505,0.00007411984,0.93920594,0.0006963881,0.00014846477,0.00048774102,0.000040193725,0.00005539716,0.0012362747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977615,0.0005306081,0.0004170287,0.0005753525,0.00013628576,0.0005792092],"domain_scores_gemma":[0.997983,0.0011352574,0.00008977794,0.00050681643,0.00014095745,0.00014423986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010741849,0.0002113038,0.0004937396,0.00027864194,0.000038826147,0.000008203558,0.0002047323,0.00034370468,0.00009414517],"category_scores_gemma":[0.0022340945,0.00013912833,0.00014472827,0.0002866881,0.00024127161,0.000042997617,0.00011868755,0.00011010403,0.000045536817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072310015,0.00003908905,0.00042405495,0.000031501688,0.0001533914,0.00007469583,0.000038144037,0.00000587693,0.96436125,0.0036947003,0.00024959806,0.030204622],"study_design_scores_gemma":[0.009735505,0.0019843597,0.0005725753,0.00013406506,0.00020723746,0.00037088647,0.000011696453,0.0048132148,0.9539678,0.01731865,0.010560651,0.00032332382],"about_ca_topic_score_codex":0.000016699763,"about_ca_topic_score_gemma":0.0000031282977,"teacher_disagreement_score":0.029881299,"about_ca_system_score_codex":0.0015395749,"about_ca_system_score_gemma":0.00083649036,"threshold_uncertainty_score":0.5673489},"labels":[],"label_agreement":null},{"id":"W2558409629","doi":"10.1007/978-1-4939-6637-0_7","title":"Multistate Computational Protein Design with Backbone Ensembles","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Protein design; Template; Toolbox; Computer science; Sequence (biology); Flexibility (engineering); Set (abstract data type); Stability (learning theory); Protein structure; Algorithm; Chemistry; Mathematics; Machine learning; Programming language","score_opus":0.014913132081480951,"score_gpt":0.33913461589594535,"score_spread":0.3242214838144644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558409629","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.058613207,0.00033037987,0.9401924,0.00018415049,0.000043034717,0.0004154694,0.000015285425,0.000015601801,0.00019046609],"genre_scores_gemma":[0.10963007,0.00001711494,0.8897541,0.00022359983,0.000034289937,0.00009796763,0.00003819239,0.00002783739,0.00017682809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797696,0.00089403265,0.00023953724,0.00049182255,0.000070106486,0.0003275151],"domain_scores_gemma":[0.9993754,0.00007186232,0.000094360046,0.00031783155,0.00007802305,0.00006250978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058274035,0.00020805513,0.00021923226,0.00008296879,0.00003684465,0.000008803652,0.00020216644,0.0002242257,0.000014039526],"category_scores_gemma":[0.00021873204,0.0001349798,0.000053099644,0.000117818876,0.00022555102,0.000002812417,0.00009860916,0.00008574273,0.000004487663],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022655322,0.000022954378,0.00052407174,0.0000065444706,0.000040747727,0.000023073488,0.000009341996,0.000585636,0.9643693,0.0031760884,0.000009776539,0.03100591],"study_design_scores_gemma":[0.0015095588,0.00064320315,0.0004240108,0.00003276137,0.0000096796875,0.000060126255,0.0000069481684,0.0003901702,0.9620489,0.031619318,0.0029174716,0.00033785516],"about_ca_topic_score_codex":0.000010827486,"about_ca_topic_score_gemma":0.000011837561,"teacher_disagreement_score":0.051016863,"about_ca_system_score_codex":0.000020883039,"about_ca_system_score_gemma":0.00009002786,"threshold_uncertainty_score":0.5504316},"labels":[],"label_agreement":null},{"id":"W2558464486","doi":"10.1007/978-1-4939-6703-2_21","title":"Recurrent Cytogenetic Abnormalities in Acute Lymphoblastic Leukemia","year":2016,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Acute Lymphoblastic Leukemia research","field":"Medicine","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Lymphoblastic Leukemia; Fish <Actinopterygii>; Leukemia; Cytogenetics; Medicine; Biology; Oncology; Cancer research; Immunology; Genetics; Gene; Chromosome","score_opus":0.05301199100272658,"score_gpt":0.4539888018160562,"score_spread":0.40097681081332964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558464486","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000028677488,0.8301727,0.16661483,0.00004879655,0.00051208114,0.0014161863,0.00007154046,0.00004750749,0.0010876483],"genre_scores_gemma":[0.0000023732116,0.8076276,0.19064087,0.00014597598,0.00014241051,0.00062489754,0.00013581278,0.00013878432,0.0005412486],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9901723,0.00497967,0.0017556105,0.0013369485,0.00033795033,0.0014174681],"domain_scores_gemma":[0.9957141,0.0022633455,0.0003820534,0.0012373291,0.00010803394,0.00029510734],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0026249513,0.00092102535,0.0040080706,0.0017922593,0.000035214183,0.000020825408,0.000784249,0.001544735,0.00022371003],"category_scores_gemma":[0.002084571,0.0006426812,0.000704819,0.0011447198,0.0005620877,0.000030224837,0.000672746,0.0011132535,0.00021119187],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011295942,0.00006826326,0.000039813578,0.005587268,0.00040268977,0.0018607209,0.000040972787,9.622427e-7,0.0008885798,0.0008499042,0.00007502959,0.99007285],"study_design_scores_gemma":[0.0036629639,0.00083254656,0.00002072685,0.025056254,0.0009943491,0.0022726736,0.000015523221,0.000111587404,0.0006186952,0.00203785,0.9633799,0.000996936],"about_ca_topic_score_codex":0.000076982506,"about_ca_topic_score_gemma":0.000011665184,"teacher_disagreement_score":0.9890759,"about_ca_system_score_codex":0.0062671294,"about_ca_system_score_gemma":0.0048798798,"threshold_uncertainty_score":0.99975145},"labels":[],"label_agreement":null},{"id":"W2558963911","doi":"10.1007/978-1-4939-6637-0_9","title":"Applications of Normal Mode Analysis Methods in Computational Protein Design","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université de Sherbrooke","funders":"","keywords":"Computer science; Flexibility (engineering); Protein design; Protein engineering; Stability (learning theory); Mode (computer interface); Normal mode; Molecular dynamics; Biological system; Protein structure; Computational chemistry; Chemistry; Mathematics; Physics; Enzyme; Machine learning; Biology","score_opus":0.014570085873577637,"score_gpt":0.398102717179399,"score_spread":0.3835326313058214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2558963911","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00966333,0.00040016673,0.9890819,0.0000993999,0.000021408952,0.0005060998,0.000026567192,0.0000069430944,0.00019418511],"genre_scores_gemma":[0.10406404,0.000016305543,0.89543027,0.00008003733,0.000017772993,0.0002731883,0.00006184417,0.000014099055,0.000042420572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968221,0.0019220988,0.00046686383,0.000459142,0.000064943204,0.00026480586],"domain_scores_gemma":[0.99914205,0.00014531089,0.00016241134,0.00041688338,0.00008685762,0.000046490073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014623641,0.00016925526,0.00036242252,0.00036703466,0.000020399357,0.000003853113,0.00029977597,0.00030568612,0.00001629337],"category_scores_gemma":[0.00029786647,0.00013418397,0.00014953686,0.0006654621,0.00018334917,0.00000314143,0.00014096392,0.000100986326,7.7682097e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006219971,0.000040636623,0.0022138385,0.000008189058,0.00012835115,0.0000016299748,0.0000129192595,0.0061765504,0.92057705,0.0063476306,0.0000011286285,0.064429864],"study_design_scores_gemma":[0.0006856307,0.00017058985,0.0010436162,0.000009465757,0.00005934285,0.0000050561407,0.000008977542,0.005563367,0.91258407,0.07871069,0.00091399264,0.00024520684],"about_ca_topic_score_codex":0.000047319132,"about_ca_topic_score_gemma":0.000033945063,"teacher_disagreement_score":0.094400704,"about_ca_system_score_codex":0.00002647001,"about_ca_system_score_gemma":0.00009222574,"threshold_uncertainty_score":0.5471863},"labels":[],"label_agreement":null},{"id":"W2559271309","doi":"10.1007/978-1-4939-6691-2_5","title":"DNA-, RNA-, and Protein-Based Stable-Isotope Probing for High-Throughput Biomarker Analysis of Active Microorganisms","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"Natural Environment Research Council; Sight Research UK","keywords":"Stable-isotope probing; Biology; Computational biology; Amplicon; DNA sequencing; Genome; Amplicon sequencing; Microorganism; Gene; 16S ribosomal RNA; Genetics; Bacteria; Polymerase chain reaction","score_opus":0.019328834715719282,"score_gpt":0.3335172428464167,"score_spread":0.3141884081306974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559271309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5115305,0.00002001532,0.48768064,0.00021746811,0.00003053681,0.00038918,0.00003846687,0.000007324292,0.00008585036],"genre_scores_gemma":[0.5758484,0.0000047366048,0.42370525,0.00025049216,0.000003184711,0.00009161088,0.00003182639,0.000012316222,0.00005218727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997164,0.0017804808,0.00030211828,0.00040305208,0.000030704323,0.00031960572],"domain_scores_gemma":[0.99874425,0.0006567806,0.0001777111,0.000361782,0.00002053723,0.000038956925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011300124,0.0001632115,0.0004772924,0.00017471527,0.00007873302,0.0000035330843,0.00027984258,0.0002536737,0.0007784811],"category_scores_gemma":[0.0003122263,0.000121537094,0.00009218499,0.0004932813,0.00062930083,0.000038633716,0.00026304444,0.00010591896,0.0000034699146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016690869,0.00007471565,0.0020289258,0.000010641859,0.00018974426,0.0000012677659,0.00009897429,0.000053076415,0.9824557,0.0008295356,0.000012708497,0.01407781],"study_design_scores_gemma":[0.0007571914,0.00026024453,0.010449228,0.000011051,0.00012678515,7.322946e-7,0.000017090988,0.00013697329,0.9741148,0.012974187,0.0009790931,0.00017263011],"about_ca_topic_score_codex":0.00036517263,"about_ca_topic_score_gemma":0.0004708516,"teacher_disagreement_score":0.06431788,"about_ca_system_score_codex":0.00008231208,"about_ca_system_score_gemma":0.000022981538,"threshold_uncertainty_score":0.8523821},"labels":[],"label_agreement":null},{"id":"W2559694616","doi":"10.1007/978-1-4939-6622-6_16","title":"Scaling Up the Phylogenetic Detection of Lateral Gene Transfer Events","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Genome; Phylogenetic tree; Metagenomics; Biology; Genomics; DNA sequencing; Computational biology; Phylogenomics; Evolutionary biology; Genetics; Gene; Clade","score_opus":0.015147291928689011,"score_gpt":0.33392070320185185,"score_spread":0.31877341127316283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2559694616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5363635,0.000021713038,0.4633122,0.00006262551,0.00014806296,0.000054718614,0.0000022052939,0.0000027119277,0.000032280444],"genre_scores_gemma":[0.95019794,0.000027205217,0.049542785,0.00010741186,0.000009826558,0.000012329058,6.38197e-7,0.000006580352,0.00009531646],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990177,0.0004959609,0.00016018352,0.00015823123,0.000028718754,0.00013920935],"domain_scores_gemma":[0.999737,0.000070707676,0.000024116202,0.00014774721,0.000003678061,0.000016754173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036796535,0.000066193104,0.00009325562,0.000023737286,0.00002742017,0.0000022666597,0.00015263607,0.00006885787,0.00029437905],"category_scores_gemma":[0.000035076475,0.000037482245,0.000057561872,0.00008950153,0.00011360166,0.000017510221,0.000062853316,0.00005941674,0.00001737664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011316932,0.000011845705,0.0018090948,7.440922e-7,0.0000061409864,5.7092444e-7,0.000045735043,0.000013174616,0.89155537,0.0000090544545,3.6890057e-7,0.10653661],"study_design_scores_gemma":[0.00016592104,0.000035016055,0.045696184,0.00000537981,0.0000068166587,0.00001000842,0.0000030812157,0.00001659187,0.95214695,0.0007918065,0.0010723466,0.00004992807],"about_ca_topic_score_codex":0.0001542386,"about_ca_topic_score_gemma":0.000039119397,"teacher_disagreement_score":0.41383445,"about_ca_system_score_codex":0.00003455533,"about_ca_system_score_gemma":0.0000020849166,"threshold_uncertainty_score":0.32232442},"labels":[],"label_agreement":null},{"id":"W2560250850","doi":"10.1007/978-1-4939-6424-6_18","title":"Isolation of Mouse Embryonic Stem Cell Lines in the Study of ERK1/2 MAP Kinase Signaling","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"Canadian Cancer Society Research Institute; Canadian Institutes of Health Research; Health Canada; Canada Research Chairs; Cancer Research Institute","keywords":"Embryonic stem cell; Biology; Blastocyst; Cell biology; Stem cell; Homologous recombination; Homologous chromosome; Gene targeting; Embryo; Genetics; Gene; Embryogenesis","score_opus":0.030117199293878048,"score_gpt":0.3719633204572415,"score_spread":0.34184612116336344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560250850","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7910493,0.000791841,0.20750657,0.00008709356,0.000050782644,0.0004406672,0.000008175903,0.000002598091,0.00006294213],"genre_scores_gemma":[0.9540278,0.00007235591,0.045540426,0.000038329516,0.000023263212,0.00005410486,0.000011225393,0.000019340945,0.00021316596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955004,0.0031684842,0.00048965163,0.00041199414,0.00013552519,0.00029393064],"domain_scores_gemma":[0.9988581,0.00023090812,0.00018852775,0.0005958106,0.00009781297,0.000028837094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002482988,0.00016021714,0.00030337553,0.00020180158,0.000019093199,0.0000041461794,0.0005019426,0.00021501043,0.0000078441335],"category_scores_gemma":[0.0001640884,0.00010207917,0.0000861597,0.0002492253,0.00012288867,0.0000029415853,0.00020747111,0.0001329696,0.0000018138435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012164698,0.00035272172,0.009756997,0.000042774936,0.000024766532,0.000009381368,0.00015508024,0.00018695772,0.9858163,0.00004504384,0.00000741436,0.0034808922],"study_design_scores_gemma":[0.0011968125,0.00095273944,0.00051530194,0.000020053458,0.00001121,0.0000020313512,0.0005037338,0.00009258178,0.99618965,0.00016696258,0.0002303236,0.00011858395],"about_ca_topic_score_codex":0.000062376916,"about_ca_topic_score_gemma":0.00005241514,"teacher_disagreement_score":0.16297846,"about_ca_system_score_codex":0.000018250536,"about_ca_system_score_gemma":0.00005538085,"threshold_uncertainty_score":0.41626677},"labels":[],"label_agreement":null},{"id":"W2560597565","doi":"10.1007/978-1-4939-6424-6_1","title":"How Genetics Has Helped Piece Together the MAPK Signaling Pathway","year":2016,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Multicellular organism; Biology; Signal transduction; MAPK/ERK pathway; Cell signaling; Receptor tyrosine kinase; Mechanism (biology); Cell biology; Neuroscience; Genetics; Computational biology; Gene","score_opus":0.10925157322752405,"score_gpt":0.44903757251456883,"score_spread":0.3397859992870448,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560597565","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000062864315,0.70871574,0.2886361,0.0013139242,0.00017777248,0.0008092061,0.000039163166,0.000025523952,0.00027631348],"genre_scores_gemma":[0.000003736423,0.7290225,0.26888505,0.00062313717,0.00019123506,0.00040631506,0.00009793307,0.000048688635,0.0007214062],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954816,0.0029089916,0.00049450394,0.0006269429,0.000065855085,0.00042211427],"domain_scores_gemma":[0.99748594,0.0011938463,0.0002693108,0.0009123506,0.00006173034,0.00007681284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015952773,0.0004082125,0.0013982095,0.00015555517,0.000095251984,0.000018587441,0.00045094447,0.001069218,0.00007329744],"category_scores_gemma":[0.0006462793,0.0002086828,0.00045729853,0.0003164284,0.0005143496,0.000006384993,0.00017362475,0.0007626682,0.000052530155],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000073474957,0.000032740372,0.000013050888,0.0005993886,0.00017811211,0.00002570955,0.000019690564,9.594107e-8,0.06442092,0.0028974977,0.00004583442,0.9317596],"study_design_scores_gemma":[0.00021129989,0.00011918976,0.0000011180714,0.0012316748,0.0002893012,0.00010239292,0.000009346008,0.0000019197012,0.009339868,0.0030937998,0.985363,0.00023711204],"about_ca_topic_score_codex":0.0000035098878,"about_ca_topic_score_gemma":0.0000016212307,"teacher_disagreement_score":0.9853172,"about_ca_system_score_codex":0.00006531337,"about_ca_system_score_gemma":0.00026454442,"threshold_uncertainty_score":0.8509838},"labels":[],"label_agreement":null},{"id":"W2560675342","doi":"10.1007/978-1-4939-6688-2_7","title":"In Situ Protein Binding Assay Using Fc-Fusion Proteins","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; University of Manitoba","funders":"","keywords":"Dissociation constant; Immunoprecipitation; Fusion protein; Chemistry; Ligand binding assay; Recombinant DNA; In situ; Molecular biology; Protein–protein interaction; Cell biology; Biophysics; Computational biology; Biochemistry; Biology; Receptor","score_opus":0.07750498639316859,"score_gpt":0.41645034509785134,"score_spread":0.33894535870468273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2560675342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5131739,0.00003489461,0.48577487,0.00025784745,0.00010628878,0.00038172022,0.0000020414607,0.000020186604,0.00024827616],"genre_scores_gemma":[0.56789386,0.000014338883,0.43114507,0.0006750488,0.000044203,0.000092243055,4.066518e-7,0.00003189093,0.00010291842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947584,0.0035185025,0.0004010332,0.00067267334,0.00012709998,0.00052224897],"domain_scores_gemma":[0.99903995,0.00047602723,0.00013723594,0.00027460282,0.000016187561,0.000055989178],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020488992,0.00019170897,0.00028733435,0.00034836182,0.00006554099,0.000012597403,0.0003230661,0.00019671924,0.000056091398],"category_scores_gemma":[0.0028590444,0.00013948922,0.00006878753,0.00056269625,0.00012456905,0.000105555344,0.00021326797,0.00025454556,0.000029409399],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046371035,0.000039830313,0.000342464,0.000007851574,0.0000010675884,0.00016782753,0.00002551714,0.000016359838,0.987944,0.0022169994,7.498754e-7,0.009190957],"study_design_scores_gemma":[0.00048251663,0.00012363175,0.000035255915,0.00012080384,0.000002005703,0.000022164239,0.000005468926,0.00024434415,0.9902931,0.0076656085,0.00080943585,0.00019567991],"about_ca_topic_score_codex":0.000024935869,"about_ca_topic_score_gemma":0.000013336479,"teacher_disagreement_score":0.05471999,"about_ca_system_score_codex":0.000112350004,"about_ca_system_score_gemma":0.00005758341,"threshold_uncertainty_score":0.56882054},"labels":[],"label_agreement":null},{"id":"W2561726990","doi":"10.1007/978-1-4939-6737-7_15","title":"Protocols for Studying the Interaction of MSI-78 with the Membranes of Whole Gram-Positive and Gram-Negative Bacteria by NMR","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Cell envelope; Lipid bilayer; Antimicrobial peptides; Membrane; Intracellular; Gram-negative bacteria; Bacteria; Cytoplasm; Biophysics; Chemistry; Cell membrane; Biochemistry; Biology; Peptide; Escherichia coli","score_opus":0.021781775670447544,"score_gpt":0.3521726259648115,"score_spread":0.330390850294364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561726990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52260405,0.00037318098,0.46818015,0.001579328,0.00012139399,0.0068332665,0.00019281615,0.000012373087,0.00010344347],"genre_scores_gemma":[0.9384496,0.00004214436,0.05832303,0.00024296489,0.000018117988,0.002540261,0.00002523101,0.000026317597,0.000332309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979694,0.0013662967,0.00024003698,0.00021955841,0.000013729851,0.00019096954],"domain_scores_gemma":[0.99794906,0.0015199332,0.00026403612,0.00017930003,0.000081483464,0.0000061760534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000757959,0.00014319255,0.00034727724,0.00004964586,0.000087065,0.0000062881086,0.00016812737,0.00013542059,0.000017620398],"category_scores_gemma":[0.00016697733,0.0000625999,0.000063658874,0.00007882408,0.00096374424,0.00004541826,0.00008444694,0.00013002826,6.08481e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00058149575,0.000056673223,0.00037630252,0.00002974964,0.00017771781,3.058331e-7,0.0007560734,0.0000013621452,0.97847205,0.00083254516,0.00008707568,0.018628651],"study_design_scores_gemma":[0.0010903948,0.00077101577,0.0004201389,0.000111144844,0.000036790054,0.000014878999,0.0013363659,0.0000022368993,0.99061424,0.0012337404,0.0042746183,0.00009445437],"about_ca_topic_score_codex":0.00014042752,"about_ca_topic_score_gemma":0.000030992946,"teacher_disagreement_score":0.41584557,"about_ca_system_score_codex":0.000012315993,"about_ca_system_score_gemma":0.00002011055,"threshold_uncertainty_score":0.35509557},"labels":[],"label_agreement":null},{"id":"W2561930092","doi":"10.1007/978-1-4939-6737-7_9","title":"Calorimetry Methods to Study Membrane Interactions and Perturbations Induced by Antimicrobial Host Defense Peptides","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Antimicrobial peptides; Antimicrobial; Host (biology); Calorimetry; Microbiology; Chemistry; Biophysics; Biology; Physics; Ecology; Thermodynamics","score_opus":0.0247566461791922,"score_gpt":0.37109639400522976,"score_spread":0.34633974782603755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2561930092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5588042,0.0002594754,0.43863067,0.0010055783,0.00058953493,0.00041616702,0.00006100796,0.000049412756,0.00018391822],"genre_scores_gemma":[0.5805484,0.00004416083,0.41743648,0.0010661447,0.00002692204,0.00006494916,0.000024304323,0.000037934773,0.0007506791],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9948135,0.0034583956,0.0004879187,0.00069965,0.000020855978,0.0005196721],"domain_scores_gemma":[0.9980474,0.0012900978,0.00013033491,0.00040086653,0.000074248936,0.000057034675],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012679005,0.0003321109,0.00059853157,0.00039353635,0.00020550119,0.000024616744,0.00026630587,0.00031063703,0.00020087478],"category_scores_gemma":[0.0010333059,0.00024803838,0.00011238916,0.00032693567,0.00029620476,0.00009369027,0.00032341006,0.00037802744,0.000049390866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010675028,0.00027795075,0.0010975432,0.0000054419143,0.0001861095,0.000005745313,0.0005126456,3.9033065e-7,0.9586112,0.00048545172,0.00045279055,0.03825799],"study_design_scores_gemma":[0.0012120596,0.00042665604,0.0012223038,0.00003262013,0.0000648484,0.000066152876,0.00053005584,0.0000010066861,0.9868261,0.00033177013,0.008925687,0.00036074803],"about_ca_topic_score_codex":0.00052829506,"about_ca_topic_score_gemma":0.000078269026,"teacher_disagreement_score":0.03789724,"about_ca_system_score_codex":0.000061297615,"about_ca_system_score_gemma":0.0000377793,"threshold_uncertainty_score":0.9999972},"labels":[],"label_agreement":null},{"id":"W2562785094","doi":"10.1007/978-1-4939-6737-7_10","title":"Fluorescence and Absorbance Spectroscopy Methods to Study Membrane Perturbations by Antimicrobial Host Defense Peptides","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"David Geffen School of Medicine, University of California, Los Angeles; Canadian Institutes of Health Research","keywords":"Calcein; Antimicrobial peptides; Membrane; Biophysics; Chemistry; Fluorescence; Vesicle; Quenching (fluorescence); Phospholipid; Fluorescence spectroscopy; Peptide; Biochemistry; Biology","score_opus":0.014556385465424006,"score_gpt":0.3427332510898546,"score_spread":0.3281768656244306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562785094","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45678216,0.0008320622,0.5402509,0.0009500167,0.00037458408,0.00051387853,0.00007121837,0.000056368714,0.00016879285],"genre_scores_gemma":[0.23254381,0.00019865598,0.7655981,0.000841492,0.000023382805,0.00005989684,0.000015863872,0.00003816685,0.00068059773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951914,0.0028519519,0.00046503602,0.00082160346,0.000024866402,0.00064512633],"domain_scores_gemma":[0.9984472,0.0008551865,0.0001311559,0.00045187713,0.000060866594,0.00005375761],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00141292,0.00035853314,0.0006369801,0.0002334934,0.00018566557,0.000025296331,0.0003535685,0.00030450855,0.00015911587],"category_scores_gemma":[0.0006093279,0.00026590828,0.00009849756,0.00026993273,0.0005625555,0.00007716903,0.00029740998,0.00029244172,0.000049502978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014353784,0.00021214237,0.002101653,0.000008206974,0.000101952945,0.000009886633,0.00038025333,6.1536144e-7,0.97752947,0.00075428956,0.00067873544,0.01807924],"study_design_scores_gemma":[0.0011678865,0.00048405826,0.001513593,0.000042027033,0.00004020099,0.000055978755,0.00024737464,0.0000014237752,0.9914861,0.0005325229,0.0040534614,0.00037542748],"about_ca_topic_score_codex":0.00019053646,"about_ca_topic_score_gemma":0.000026430318,"teacher_disagreement_score":0.22534722,"about_ca_system_score_codex":0.00005259875,"about_ca_system_score_gemma":0.000037250917,"threshold_uncertainty_score":0.9999793},"labels":[],"label_agreement":null},{"id":"W2562792762","doi":"10.1007/978-1-4939-6658-5_6","title":"The Bio-Analytic Resource for Plant Biology","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":74,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Arabidopsis; Computational biology; Biology; Resource (disambiguation); Proteome; Cover (algebra); Data science; Genome; Systems biology; Computer science; Gene; Bioinformatics; Genetics; Engineering","score_opus":0.025448898251420247,"score_gpt":0.36493679438394644,"score_spread":0.33948789613252617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2562792762","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07339933,0.0075115394,0.9147994,0.0023135094,0.00054505793,0.00052167184,0.00010875545,0.00000740243,0.0007933356],"genre_scores_gemma":[0.29771915,0.002931396,0.69324476,0.0024809346,0.0008118402,0.0007929324,0.0001547457,0.00013229123,0.001731951],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978627,0.0006815446,0.00035236878,0.00055439764,0.00003237733,0.00051659223],"domain_scores_gemma":[0.9987252,0.00047802983,0.0001134976,0.0005696726,0.000057872305,0.000055781344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014634724,0.00021158603,0.00027427814,0.00006794147,0.00013662508,0.000010358781,0.0004410369,0.00025915887,0.0000031906968],"category_scores_gemma":[0.0009061788,0.00011878533,0.00017455335,0.00009515114,0.00037704807,3.0278414e-7,0.0002527616,0.00006738661,0.0000029386615],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009721257,0.000014713672,0.0025890789,0.0000034125858,0.00011405853,9.846565e-7,0.00001092123,0.000003548256,0.9492902,0.008107492,0.00037988514,0.03938848],"study_design_scores_gemma":[0.00067195215,0.00041065726,0.00042040512,0.0000054015973,0.000023140092,0.00000954764,0.000025175023,0.000020763302,0.40369874,0.020181824,0.57432383,0.00020852455],"about_ca_topic_score_codex":0.00001054448,"about_ca_topic_score_gemma":0.000032138123,"teacher_disagreement_score":0.573944,"about_ca_system_score_codex":0.000019292478,"about_ca_system_score_gemma":0.000049219765,"threshold_uncertainty_score":0.4843925},"labels":[],"label_agreement":null},{"id":"W2563218632","doi":"10.1007/978-1-4939-6734-6_11","title":"Multiplex Detection of KRAS Mutations Using Passive Droplet Fusion","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Innovative Microfluidic and Catalytic Techniques Innovation","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Conseil Régional d'Alsace; Association pour la Recherche sur le Cancer; Ministère de l'Enseignement Supérieur et de la Recherche Scientifique; Institute of Cancer Research; Institut National Du Cancer; Centre National de la Recherche Scientifique","keywords":"KRAS; Multiplex; Fusion; Mutant; Mutation; genomic DNA; DNA; Biology; Oncogene; Wild type; Allele; Genetics; Molecular biology; Computational biology; Cell; Gene; Cell cycle","score_opus":0.0311850434931509,"score_gpt":0.385930691278832,"score_spread":0.35474564778568113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2563218632","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16530766,0.00007799452,0.8337472,0.000014867895,0.0002347559,0.00013734002,0.0000067219135,0.00004972866,0.00042372104],"genre_scores_gemma":[0.5951354,0.0000061647443,0.40479094,0.000013353766,0.00001274797,0.0000130622,0.0000123926675,0.000012346862,0.000003600567],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923843,0.00012553106,0.00030127424,0.00014816628,0.000038461843,0.00014813905],"domain_scores_gemma":[0.9993793,0.00004028072,0.00013273676,0.00033208,0.0001044158,0.000011211235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047545123,0.000108036744,0.00018533309,0.0002195185,0.00008157793,0.00000889202,0.00016966497,0.00016887629,0.000009677395],"category_scores_gemma":[0.00034366688,0.00011198696,0.000037808124,0.00019369581,0.00016543544,0.00004837368,0.00006763672,0.00015429841,8.6392737e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000035695514,0.0000079213705,0.00028374157,0.0000147882165,0.0000134724205,0.0000030671174,0.00005876212,0.000112105954,0.92089164,0.002794068,0.0000022599406,0.07581458],"study_design_scores_gemma":[0.00019787332,0.000028983697,0.0011214628,0.000017568284,0.000007906881,0.000006648525,0.000029180981,0.013490928,0.97963524,0.0047812453,0.00057462417,0.00010831625],"about_ca_topic_score_codex":0.000077043784,"about_ca_topic_score_gemma":0.0000025406327,"teacher_disagreement_score":0.42982775,"about_ca_system_score_codex":0.0000754253,"about_ca_system_score_gemma":0.000013837382,"threshold_uncertainty_score":0.45666957},"labels":[],"label_agreement":null},{"id":"W2565402629","doi":"10.1007/978-1-4939-6737-7_24","title":"Protocols for Studying Antimicrobial Peptides (AMPs) as Anticancer Agents","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Propidium iodide; Antimicrobial peptides; Annexin; Cancer cell; Melittin; Cytotoxicity; Apoptosis; Intracellular; Cell biology; Biology; Chemistry; Biochemistry; Programmed cell death; Peptide; Cancer; In vitro","score_opus":0.050286704253326195,"score_gpt":0.4184717220634207,"score_spread":0.3681850178100945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2565402629","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17214397,0.00021704937,0.8179241,0.00084119535,0.0007046687,0.0072382977,0.00009262598,0.00009179072,0.0007463111],"genre_scores_gemma":[0.3641771,0.00011026913,0.62282544,0.002525078,0.00013607804,0.006165583,0.00006400299,0.00011685065,0.003879598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971834,0.0009981624,0.0004676425,0.00061678886,0.000021304588,0.0007127248],"domain_scores_gemma":[0.9987854,0.0005641781,0.00018123191,0.0003661483,0.000077283534,0.000025754694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010581954,0.0002978079,0.00058321026,0.00019477433,0.00014352833,0.000018307615,0.00038151696,0.00039959344,0.00024069453],"category_scores_gemma":[0.00051278796,0.0002115783,0.00021016513,0.00013988823,0.0005229943,0.00007537066,0.00020063788,0.000193521,0.00009600842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002623683,0.00012546395,0.0030285371,0.000031251388,0.00012255526,0.0000072344355,0.00009706681,0.0000020818065,0.95410204,0.004739032,0.00089049555,0.03659185],"study_design_scores_gemma":[0.0024611852,0.00038009044,0.00045370674,0.00015719276,0.000026325075,0.000037362057,0.000067844056,0.0000016025577,0.946036,0.0049310545,0.045107547,0.00034011903],"about_ca_topic_score_codex":0.00007561954,"about_ca_topic_score_gemma":0.000011085756,"teacher_disagreement_score":0.19509867,"about_ca_system_score_codex":0.00006596592,"about_ca_system_score_gemma":0.00008321085,"threshold_uncertainty_score":0.8627913},"labels":[],"label_agreement":null},{"id":"W2566032479","doi":"10.1007/978-1-4939-6598-4_15","title":"A Simple Method to Avoid Nonspecific Signal When Using Monoclonal Anti-Tau Antibodies in Western Blotting of Mouse Brain Proteins","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Monoclonal antibody; Antibody; Blot; Tau protein; Molecular biology; Hyperphosphorylation; Immunoprecipitation; Truncation (statistics); Primary and secondary antibodies; Phosphorylation; Chemistry; Biology; Alzheimer's disease; Cell biology; Immunology; Medicine; Disease; Biochemistry; Pathology; Computer science","score_opus":0.06608752582915561,"score_gpt":0.45459311633536637,"score_spread":0.38850559050621075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2566032479","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49358,0.00064634974,0.5047387,0.0003271819,0.000012514236,0.00061571004,0.000037274353,0.000013904086,0.000028362338],"genre_scores_gemma":[0.20973389,0.00001592251,0.78990614,0.0001745576,0.000028436252,0.00006581277,0.000016558011,0.000034505276,0.000024195257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99565095,0.0024508617,0.00052914297,0.0005590142,0.00018849701,0.0006215211],"domain_scores_gemma":[0.9984614,0.00071949477,0.00012415767,0.0003762426,0.00010265091,0.00021600963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019913348,0.00024598787,0.00071426266,0.0005872226,0.000038950875,0.00000838434,0.00017635497,0.00017190946,0.00006259843],"category_scores_gemma":[0.00061754324,0.00017615505,0.0001399551,0.00033217832,0.00017100575,0.00004411133,0.0002092238,0.00019377943,0.000008984764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027953924,0.00025814006,0.18436535,0.000049583272,0.00051617646,0.00026491508,0.00017756858,0.00002273674,0.80011606,0.00009672155,0.000004466787,0.013848772],"study_design_scores_gemma":[0.0028898176,0.000659277,0.01317511,0.0002761923,0.00007993087,0.000047035468,0.000101472324,0.00042074174,0.9792249,0.002742906,0.00014019612,0.00024240663],"about_ca_topic_score_codex":0.0003975987,"about_ca_topic_score_gemma":0.000043290765,"teacher_disagreement_score":0.28516743,"about_ca_system_score_codex":0.00012735173,"about_ca_system_score_gemma":0.00020520508,"threshold_uncertainty_score":0.71833944},"labels":[],"label_agreement":null},{"id":"W2566246648","doi":"10.1007/978-1-4939-6737-7_5","title":"High-Performance Liquid Chromatography and Mass Spectrometry-Based Design of Proteolytically Stable Antimicrobial Peptides","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Antimicrobial peptides; Proteases; Economic shortage; Bioavailability; Antibiotics; Antimicrobial; Chemistry; High-performance liquid chromatography; Mode of action; Mass spectrometry; Chromatography; Peptide; Pharmacology; Biochemistry; Medicine; Enzyme; Organic chemistry","score_opus":0.012911392616352076,"score_gpt":0.2780260261771663,"score_spread":0.2651146335608142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2566246648","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4048044,0.00029342808,0.59427863,0.0001550052,0.0001195329,0.00025665062,0.000023186698,0.00002709648,0.00004203665],"genre_scores_gemma":[0.47072327,0.00011385283,0.5289354,0.00012203405,0.000008359063,0.000018729805,0.0000071394493,0.00001805128,0.000053200423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997389,0.0011260747,0.00045857142,0.0004607116,0.000024317862,0.0005412913],"domain_scores_gemma":[0.9989436,0.00046848302,0.00019144018,0.0003109285,0.00006037747,0.00002516023],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010218539,0.0002707181,0.0006183859,0.000405651,0.00006915277,0.000008111539,0.0002490517,0.00037276497,0.00010798139],"category_scores_gemma":[0.00019262596,0.00019446373,0.00009232476,0.00029067916,0.0010636612,0.00006826279,0.00010005989,0.00020863683,0.000011558568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005836898,0.00008558283,0.0020174754,0.0000591033,0.00009426475,0.00000568699,0.000018076797,0.000041492567,0.9936842,0.001465656,0.000039226044,0.0019055806],"study_design_scores_gemma":[0.0014290733,0.0011151138,0.00047065035,0.00013581353,0.00002754379,0.000023576673,0.000010581047,0.00001822026,0.9954288,0.000893855,0.00018657577,0.0002602192],"about_ca_topic_score_codex":0.000051814088,"about_ca_topic_score_gemma":0.0000013796329,"teacher_disagreement_score":0.06591885,"about_ca_system_score_codex":0.000027241827,"about_ca_system_score_gemma":0.00008013634,"threshold_uncertainty_score":0.7930001},"labels":[],"label_agreement":null},{"id":"W2566416848","doi":"10.1007/978-1-4939-6598-4_13","title":"Production of O-GlcNAc Modified Recombinant Tau in E. coli and Detection of Ser400 O-GlcNAc Tau In Vivo","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Simon Fraser University","funders":"Canadian Institutes of Health Research","keywords":"Tauopathy; Tau protein; Recombinant DNA; Threonine; Chemistry; Serine; In vivo; Biochemistry; In vitro; Cell biology; Molecular biology; Phosphorylation; Biology; Neurodegeneration; Alzheimer's disease; Medicine; Disease; Pathology; Genetics","score_opus":0.0228550248883424,"score_gpt":0.36508103428625116,"score_spread":0.34222600939790876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2566416848","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8905697,0.0004624808,0.107924506,0.00021869874,0.00017960739,0.000500882,0.0000056343656,0.000004011485,0.00013446342],"genre_scores_gemma":[0.96784514,0.0004269321,0.031380884,0.000024603754,0.000018649189,0.000091296126,0.0000068486947,0.000016901186,0.00018875729],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974044,0.0012293058,0.00050483714,0.00048593167,0.000086378575,0.00028912356],"domain_scores_gemma":[0.9992963,0.000056171095,0.00015050692,0.00035201074,0.00010187275,0.00004310371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016856105,0.00015110493,0.00033116728,0.0003979236,0.000015886944,0.000002875091,0.00014620276,0.00034074835,0.000013055289],"category_scores_gemma":[0.0011052905,0.00012379997,0.000054813016,0.00038631106,0.00022229934,0.0000059984563,0.00013183853,0.00013926622,5.097487e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003120239,0.000103341205,0.0060191466,0.00004454765,0.000012533499,0.0000036533168,0.00004264813,0.00004904667,0.9543712,0.00029477823,0.0000056237363,0.03874143],"study_design_scores_gemma":[0.001252886,0.00047169058,0.007869907,0.000050985782,0.0000034324607,0.000009302682,0.00003816742,0.00013339004,0.9868278,0.0023110367,0.00089411455,0.0001373113],"about_ca_topic_score_codex":0.000337252,"about_ca_topic_score_gemma":0.00056303944,"teacher_disagreement_score":0.07727541,"about_ca_system_score_codex":0.0000432747,"about_ca_system_score_gemma":0.00006685112,"threshold_uncertainty_score":0.5048416},"labels":[],"label_agreement":null},{"id":"W2567713795","doi":"10.1007/978-1-4939-6737-7_1","title":"Antimicrobial Peptides: An Introduction","year":2016,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":287,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Antimicrobial peptides; Antimicrobial; Antibiotics; Function (biology); Computational biology; Biology; Antibiotic resistance; Microbiology; Genetics","score_opus":0.03368411074606457,"score_gpt":0.3997311406278723,"score_spread":0.3660470298818077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2567713795","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010369003,0.8619609,0.13440454,0.00013632372,0.0024638565,0.0005459158,0.00012215985,0.000097102726,0.00025887744],"genre_scores_gemma":[0.000001672487,0.8866483,0.110575154,0.00014749743,0.00037804362,0.000073201365,0.00068120396,0.000100255296,0.0013946833],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9915545,0.005427912,0.0009697315,0.0012100239,0.000020024527,0.00081780175],"domain_scores_gemma":[0.99816996,0.0003653784,0.0004957427,0.0008777442,0.000055269724,0.000035887002],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0014222394,0.00073193025,0.0024804645,0.00063934125,0.00011806682,0.000026989208,0.00069147383,0.0017712238,0.00048322848],"category_scores_gemma":[0.00029787677,0.0005373827,0.0006226436,0.00031129044,0.0007171277,0.000102635044,0.00029756193,0.0009663963,0.00040075215],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017840071,0.00009042753,0.000001717051,0.00068614946,0.00019143129,0.000015715934,0.00002343608,2.5520336e-7,0.1908322,0.003997327,0.0010033239,0.80314016],"study_design_scores_gemma":[0.00034943703,0.00014901791,3.139025e-7,0.0012360344,0.00019463265,0.00038549528,0.000014218179,1.01088396e-7,0.015027433,0.0006759837,0.98132455,0.0006427849],"about_ca_topic_score_codex":0.00004749227,"about_ca_topic_score_gemma":0.000009080179,"teacher_disagreement_score":0.9803212,"about_ca_system_score_codex":0.00014478475,"about_ca_system_score_gemma":0.00019578381,"threshold_uncertainty_score":0.99970776},"labels":[],"label_agreement":null},{"id":"W2569223734","doi":"10.1007/978-1-4939-6786-5_29","title":"Isolation and Characterization of Aortic Dendritic Cells and Lymphocytes in Atherosclerosis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Clinical Research Institute; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Flow cytometry; Immune system; Aorta; Dendritic cell; Immunology; Antigen; Pathology; Follicular dendritic cells; Staining; Medicine; Biology; Antigen-presenting cell; T cell; Internal medicine","score_opus":0.017384487392086423,"score_gpt":0.31208593408778,"score_spread":0.2947014466956936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2569223734","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9224194,0.0020367552,0.07517415,0.000026972992,0.0001427123,0.00014734444,0.000014340021,0.000006602023,0.000031669813],"genre_scores_gemma":[0.98375624,0.001009422,0.015113938,0.00004548984,0.000004964763,0.00002414289,0.000018904399,0.000011542881,0.000015349864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851024,0.00076701946,0.00025408433,0.0002757454,0.000014266634,0.00017865073],"domain_scores_gemma":[0.99943674,0.00007974675,0.00014263933,0.00030455855,0.000021911286,0.000014402031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005868092,0.00011832668,0.00033994607,0.000096857126,0.00007391835,0.000015296173,0.00012085058,0.0002164379,0.00001559644],"category_scores_gemma":[0.00015547327,0.00011266506,0.00005964075,0.000044299093,0.0003496558,0.000052643813,0.00011630711,0.00008123824,0.0000016694556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017437535,0.000030339916,0.10408602,0.00001733543,0.000033473105,5.3435554e-7,0.00009489811,6.5689864e-7,0.8684358,0.00029587076,1.4678638e-7,0.026987478],"study_design_scores_gemma":[0.0008528032,0.0000515117,0.48523137,0.00004189661,0.000028730508,0.0000030397282,0.000029570796,0.000052896117,0.5130793,0.00048685895,0.00004976463,0.000092266506],"about_ca_topic_score_codex":0.00010487622,"about_ca_topic_score_gemma":0.000009842867,"teacher_disagreement_score":0.38114533,"about_ca_system_score_codex":0.00001673507,"about_ca_system_score_gemma":0.000016073478,"threshold_uncertainty_score":0.45943478},"labels":[],"label_agreement":null},{"id":"W2573458905","doi":"10.1007/978-1-4939-6762-9_20","title":"Characterizing SH2 Domain Specificity and Network Interactions Using SPOT Peptide Arrays","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Abbott Laboratories","keywords":"SH2 domain; Proto-oncogene tyrosine-protein kinase Src; Computational biology; Peptide; Tyrosine; Tyrosine kinase; Chemistry; Receptor tyrosine kinase; Biology; Biochemistry; Cell biology; Biophysics; Phosphorylation; Receptor","score_opus":0.08692967192579643,"score_gpt":0.467802624999601,"score_spread":0.3808729530738046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2573458905","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6859863,0.00034070254,0.30717582,0.0013573131,0.00029482122,0.0001787106,0.000005424648,0.0000112510315,0.004649709],"genre_scores_gemma":[0.09515133,0.00015832305,0.9034166,0.0005058914,0.00040571444,0.000010510328,0.000014097718,0.000019027117,0.00031855758],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99839383,0.00052663893,0.00025719014,0.0003420653,0.00007650102,0.0004037578],"domain_scores_gemma":[0.9991365,0.00019122497,0.00011113641,0.00039981,0.000041637348,0.000119685305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011206566,0.00015240938,0.00040138295,0.00010998094,0.00028035778,0.000041673156,0.00016376445,0.00011294044,0.00010027853],"category_scores_gemma":[0.0003373087,0.00012843459,0.00008859871,0.000071041686,0.00033710216,0.000045843477,0.000268105,0.00044672517,0.0000066572884],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018942147,0.000034396035,0.05894998,0.000027539018,0.00004997882,0.00019144294,0.00010057396,0.000005213128,0.9229507,0.0028335499,0.000015200326,0.014652015],"study_design_scores_gemma":[0.0026773722,0.00067030994,0.49806324,0.00066283066,0.00012803431,0.0017057548,0.00032157952,0.006764441,0.2774883,0.05056063,0.15999399,0.00096354005],"about_ca_topic_score_codex":0.00035315903,"about_ca_topic_score_gemma":0.000037500893,"teacher_disagreement_score":0.6454624,"about_ca_system_score_codex":0.00004100921,"about_ca_system_score_gemma":0.00003480252,"threshold_uncertainty_score":0.52374107},"labels":[],"label_agreement":null},{"id":"W2575854769","doi":"10.1007/978-1-4939-6762-9_4","title":"Classification and Lineage Tracing of SH2 Domains Throughout Eukaryotes","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Abbott Laboratories","keywords":"SH2 domain; Computational biology; Biology; Architecture domain; Genome; Protein domain; Evolutionary biology; Gene; Genetics; Proto-oncogene tyrosine-protein kinase Src; Computer science; Signal transduction","score_opus":0.10347039525998593,"score_gpt":0.48523003838164525,"score_spread":0.38175964312165933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2575854769","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9116674,0.000111206566,0.085231654,0.00037975653,0.00017633555,0.00018766437,0.000008392995,0.000016690354,0.0022209205],"genre_scores_gemma":[0.9238659,0.00016760374,0.075578354,0.00029691728,0.00002198778,0.000019234341,0.0000023767807,0.000010419732,0.000037217083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968661,0.0020721504,0.00026146852,0.00048414452,0.00003995949,0.00027614526],"domain_scores_gemma":[0.9983173,0.00085457356,0.000186843,0.0005817551,0.000023831608,0.000035721918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010235446,0.000121161145,0.0002976892,0.00011972796,0.00020600291,0.000014477497,0.00046902942,0.00022159184,0.000011788224],"category_scores_gemma":[0.0036916249,0.000103171624,0.000050927734,0.000084683175,0.0013988279,0.0000701767,0.0002432402,0.0003419816,0.000003279511],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042064854,0.000038085574,0.014758715,0.000013235691,0.0000042173638,0.000012796513,0.00006872388,0.0000020774478,0.9625154,0.018756995,0.0000017485397,0.0037859099],"study_design_scores_gemma":[0.00031752678,0.00017780595,0.05382373,0.000008324319,0.0000043762066,0.000017456796,0.000012102678,0.00038269977,0.92912936,0.015942024,0.000095732044,0.0000888497],"about_ca_topic_score_codex":0.000022950793,"about_ca_topic_score_gemma":0.0000036996144,"teacher_disagreement_score":0.03906502,"about_ca_system_score_codex":0.00000833552,"about_ca_system_score_gemma":0.00002552453,"threshold_uncertainty_score":0.5154039},"labels":[],"label_agreement":null},{"id":"W2575984146","doi":"10.1007/978-1-4939-6762-9_5","title":"SH2 Ligand Prediction–Guidance for In-Silico Screening","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Western University","funders":"","keywords":"SH2 domain; In silico; Computational biology; Identification (biology); Computer science; Function (biology); Domain (mathematical analysis); Support vector machine; Data mining; Artificial intelligence; Machine learning; Chemistry; Biology; Biochemistry; Mathematics; Genetics","score_opus":0.03406895785928924,"score_gpt":0.3880461690003386,"score_spread":0.35397721114104935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2575984146","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08803083,0.0013560492,0.90880257,0.00029293608,0.0003070616,0.0004429081,0.000023293884,0.000009649742,0.0007347325],"genre_scores_gemma":[0.14988032,0.00012652544,0.848953,0.00027618266,0.00015711396,0.0003154489,0.000034707475,0.000033255157,0.00022344018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820983,0.00045571238,0.00033173544,0.0005696759,0.000050403247,0.00038265332],"domain_scores_gemma":[0.9988794,0.00006710415,0.0001662877,0.0007835698,0.00004833607,0.000055357737],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018259872,0.0001896865,0.0002809664,0.00009555152,0.00014582535,0.00003501541,0.0005237794,0.0003858662,0.0000059932245],"category_scores_gemma":[0.0015682675,0.00018937208,0.00012230239,0.000048507587,0.0001390806,0.0000049419637,0.0001969031,0.00011675979,0.000001402272],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010044557,0.000025576392,0.009350965,0.000014462215,0.000022673426,0.0000052483983,0.000015413974,0.000031907803,0.95055276,0.0010936699,0.000024369421,0.038762517],"study_design_scores_gemma":[0.0008003775,0.0002547626,0.003443549,0.000036472593,0.000008407273,0.00000793516,0.000015110681,0.00015321434,0.9735213,0.00832082,0.013239541,0.00019853674],"about_ca_topic_score_codex":0.00003698269,"about_ca_topic_score_gemma":0.000046186065,"teacher_disagreement_score":0.061849494,"about_ca_system_score_codex":0.000012688229,"about_ca_system_score_gemma":0.0000402364,"threshold_uncertainty_score":0.7722369},"labels":[],"label_agreement":null},{"id":"W2576921847","doi":"10.1007/978-1-4939-6762-9_25","title":"Using Reciprocal Protein-Peptide Array Screening to Unravel Protein Interaction Networks","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Computational biology; Phosphorylation; SH2 domain; Protein–protein interaction; Peptide; Protein phosphorylation; Biology; Tyrosine phosphorylation; DECIPHER; Cell biology; Chemistry; Bioinformatics; Biochemistry; Protein kinase A","score_opus":0.06477070371413267,"score_gpt":0.4544120934419625,"score_spread":0.3896413897278298,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2576921847","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.052757405,0.000030306595,0.94401383,0.00021206235,0.000033792927,0.00062419806,0.0000040779805,0.00007181189,0.002252526],"genre_scores_gemma":[0.06223785,0.0000025679103,0.9366177,0.00008356502,0.00009625811,0.00073831127,0.000010669919,0.00003782778,0.0001752528],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857366,0.0001624458,0.00033789416,0.0005142173,0.000053133528,0.00035867465],"domain_scores_gemma":[0.99869955,0.000040167935,0.00027288127,0.000849025,0.000056851262,0.00008151778],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063570583,0.00019810644,0.00026433807,0.00007853647,0.00024728576,0.000052376166,0.00049650116,0.00027872663,0.000038289116],"category_scores_gemma":[0.0005442776,0.00020531025,0.00007837383,0.000090592555,0.00010298148,0.00006307998,0.00024436603,0.0005212934,0.0000022681872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043739616,0.000020335236,0.00026859937,0.000012062515,0.000010846147,0.000005243246,0.000014246979,0.0009495513,0.9527448,0.0031236883,0.0000011601927,0.042805716],"study_design_scores_gemma":[0.00016839073,0.000030742,0.000017468854,0.00016398975,0.0000063450075,0.000010103904,0.000020868756,0.006066906,0.97557306,0.013925723,0.0037794502,0.00023696368],"about_ca_topic_score_codex":0.00016463842,"about_ca_topic_score_gemma":0.000011340158,"teacher_disagreement_score":0.042568754,"about_ca_system_score_codex":0.00009854198,"about_ca_system_score_gemma":0.00002287918,"threshold_uncertainty_score":0.8372309},"labels":[],"label_agreement":null},{"id":"W2577818366","doi":"10.1007/978-1-4939-6762-9_13","title":"Creation of Phosphotyrosine Superbinders by Directed Evolution of an SH2 Domain","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Toronto","funders":"Canadian Cancer Society Research Institute; Canada Research Chairs; Cancer Research Institute","keywords":"SH2 domain; Computational biology; Phage display; Tyrosine; Domain (mathematical analysis); Directed evolution; Escherichia coli; Chemistry; Biology; Posttranslational modification; Antibody; Cell biology; Biochemistry; Tyrosine phosphorylation; Genetics; Gene; Mathematics","score_opus":0.025407771659312416,"score_gpt":0.4390555383264478,"score_spread":0.4136477666671354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2577818366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81938857,0.0011720022,0.17717259,0.00033045217,0.000056839526,0.00019259358,0.000024409987,0.0000097838565,0.0016527846],"genre_scores_gemma":[0.6089494,0.000110519424,0.39060345,0.000036872923,0.000014276563,0.0000076052947,0.00007736512,0.000010463251,0.00018999983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984828,0.0007195341,0.00028882624,0.00019861663,0.00011295537,0.00019721588],"domain_scores_gemma":[0.999155,0.00011772794,0.00013484902,0.0004121904,0.000114226255,0.00006599202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00115077,0.00010129101,0.0003662019,0.00012103069,0.000052006268,0.000002964203,0.00018436012,0.00016599901,0.00006785502],"category_scores_gemma":[0.00059549353,0.00008331814,0.000065517655,0.00010264615,0.00047792032,0.000030909272,0.00007302608,0.00014598819,9.096257e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000606952,0.00015191048,0.034112487,0.00005169448,0.00003833569,0.000007121277,0.00007581449,0.0000022847817,0.95029277,0.0026673875,0.000024079063,0.0119691575],"study_design_scores_gemma":[0.0010070739,0.0007110191,0.055533934,0.000043300908,0.000025409907,0.000012542036,0.00005796846,0.0009554529,0.9346917,0.0061236327,0.0007550897,0.00008282996],"about_ca_topic_score_codex":0.0032276476,"about_ca_topic_score_gemma":0.000050180348,"teacher_disagreement_score":0.21343088,"about_ca_system_score_codex":0.000045134686,"about_ca_system_score_gemma":0.00006404777,"threshold_uncertainty_score":0.48792592},"labels":[],"label_agreement":null},{"id":"W2579409181","doi":"10.1007/978-1-0716-3159-1","title":"Plant-Pathogen Interactions","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Variety (cybernetics); Biology; Current (fluid); Computational biology; Computer science; Engineering; Artificial intelligence; Electrical engineering","score_opus":0.041583012296665244,"score_gpt":0.34223675891046546,"score_spread":0.30065374661380023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2579409181","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006517251,0.011436796,0.058165107,0.0027694374,0.0098864855,0.0026693977,0.02118645,0.0012157824,0.8861533],"genre_scores_gemma":[0.000026203721,0.0009360285,0.13106349,0.00067744346,0.0006923387,0.0001223299,0.006283048,0.0000128339525,0.8601863],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979058,0.0006631772,0.00036867545,0.00058459473,0.000084900916,0.00039287133],"domain_scores_gemma":[0.99883014,0.0007802109,0.00016592261,0.00012040059,0.000031332722,0.00007198309],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007073511,0.00028357643,0.00049064506,0.000067790665,0.00007418685,0.000019542478,0.00042151794,0.0005400725,0.0002221141],"category_scores_gemma":[0.00015781094,0.00011633581,0.00021927574,0.00022827936,0.000090535425,0.000014141652,0.00017665992,0.000506851,0.00013054378],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000130614635,0.000016598822,0.000045314144,0.000010295753,0.000028987855,0.00022536257,0.000005442467,0.000001936884,0.957461,0.0032693064,0.0028338188,0.036088847],"study_design_scores_gemma":[0.0000723375,0.00009367232,0.00067063345,0.000112323156,0.000027197111,0.000050604776,0.000014985944,0.000031103373,0.0030096867,0.034372944,0.96112055,0.00042399194],"about_ca_topic_score_codex":0.000025268466,"about_ca_topic_score_gemma":0.00075499376,"teacher_disagreement_score":0.9582867,"about_ca_system_score_codex":0.0000745719,"about_ca_system_score_gemma":0.00003294062,"threshold_uncertainty_score":0.47440368},"labels":[],"label_agreement":null},{"id":"W2580058168","doi":"10.1007/978-1-4939-6625-7_22","title":"Isolation of Mature Adipocytes from White Adipose Tissue and Gene Expression Studies by Real-Time Quantitative RT-PCR","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Adipose tissue; Adipocyte; Stromal vascular fraction; White adipose tissue; Biology; Gene expression; Stromal cell; Adipose tissue macrophages; RNA extraction; Population; Cell biology; Gene; Endocrinology; Genetics; Cancer research; Medicine","score_opus":0.03876536910653058,"score_gpt":0.43225111179412423,"score_spread":0.3934857426875937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2580058168","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5403261,0.07351985,0.38408175,0.0006290399,0.0002755764,0.0005011706,0.00008327236,0.000030107069,0.0005531178],"genre_scores_gemma":[0.022829754,0.00257765,0.97391695,0.00011000424,0.00005787111,0.000021723195,0.000090241956,0.000025123176,0.00037069965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983812,0.00060570135,0.00033104155,0.00039920944,0.00007750648,0.00020536313],"domain_scores_gemma":[0.9987125,0.00026823772,0.00030052647,0.00053209654,0.00011362752,0.00007302043],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063820917,0.00019334083,0.00072079303,0.00011171684,0.0000842942,0.000008929903,0.00013688179,0.00028010507,0.000043909007],"category_scores_gemma":[0.0012439832,0.00015485607,0.000048546717,0.000061126644,0.00032523827,0.000059813556,0.00015650783,0.00018278947,0.0000049870105],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020451589,0.000040165534,0.0034160968,0.00003209971,0.0001685661,0.000028699042,0.0010874956,7.5466363e-7,0.9844812,0.00038064172,0.00027816265,0.009881606],"study_design_scores_gemma":[0.0011048374,0.0003410324,0.009880925,0.00013910574,0.00022045952,0.000010158291,0.00014712769,0.000089659734,0.9807362,0.005185132,0.0019918866,0.00015348915],"about_ca_topic_score_codex":0.00019139964,"about_ca_topic_score_gemma":0.0000074019954,"teacher_disagreement_score":0.58983517,"about_ca_system_score_codex":0.000015901822,"about_ca_system_score_gemma":0.000023381659,"threshold_uncertainty_score":0.63148475},"labels":[],"label_agreement":null},{"id":"W2580154243","doi":"10.1007/978-1-4939-6682-0_13","title":"Genotyping-by-Sequencing and Its Application to Oat Genomic Research","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Genotyping; Biology; Genome; SNP genotyping; SNP; Computational biology; Genetics; Genomics; Genotype; Single-nucleotide polymorphism; Gene","score_opus":0.1808385551478059,"score_gpt":0.5051134732073284,"score_spread":0.32427491805952247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2580154243","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022598464,0.91648406,0.08140926,0.000036820315,0.000112919646,0.00074266974,0.000074684904,0.0000076164297,0.00090596406],"genre_scores_gemma":[0.0000633364,0.9469243,0.051771864,0.000109501525,0.00012029887,0.00013705865,0.00026677427,0.000035606616,0.00057122234],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99665725,0.0013819634,0.0003866427,0.00096882135,0.00008798275,0.0005173277],"domain_scores_gemma":[0.9988355,0.00008601377,0.00018041025,0.00066208036,0.000088717556,0.0001472995],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025212467,0.00032436723,0.00083262747,0.00026764738,0.00020910347,0.00004914769,0.00071484747,0.00072693796,0.000007277099],"category_scores_gemma":[0.0005989185,0.0003026845,0.00014649524,0.00012819444,0.000119905235,0.0000015011085,0.00079092284,0.00037676413,0.000033619675],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008322183,0.000012770652,0.000010117412,0.0006798274,0.0000593012,0.0000064645483,0.000019746058,0.0000024059416,0.39985397,0.00032351492,0.00024072971,0.59878284],"study_design_scores_gemma":[0.00011222825,0.00015848105,0.0000031693323,0.0003703213,0.00005163953,0.000027110718,0.0000139800595,0.000010384847,0.005147942,0.00027711058,0.99349016,0.0003374724],"about_ca_topic_score_codex":0.00006187677,"about_ca_topic_score_gemma":0.000008388035,"teacher_disagreement_score":0.9932494,"about_ca_system_score_codex":0.00005830102,"about_ca_system_score_gemma":0.00018583835,"threshold_uncertainty_score":0.99994254},"labels":[],"label_agreement":null},{"id":"W2580489350","doi":"10.1007/978-1-4939-6625-7_8","title":"Measurement of Angiotensin Converting Enzyme 2 Activity in Biological Fluid (ACE2)","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renin-Angiotensin System Studies","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Chemistry; Angiotensin-converting enzyme 2; Enzyme; Recombinant DNA; Renin–angiotensin system; Metalloproteinase; Ectodomain; Biochemistry; Angiotensin II; Extracellular; Cell culture; Bovine serum albumin; Molecular biology; Biology; Internal medicine; Endocrinology; Receptor; Gene","score_opus":0.11408645990780131,"score_gpt":0.4335620681187324,"score_spread":0.3194756082109311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2580489350","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8350419,0.0028061734,0.15895285,0.0014694275,0.00034657525,0.000551519,0.0000023567877,0.000024319761,0.00080488937],"genre_scores_gemma":[0.78936964,0.000047089714,0.21038385,0.000119836965,0.00003650623,0.000018292694,0.0000011905901,0.000014177749,0.0000094325105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99668485,0.0016737399,0.00055168325,0.0005007703,0.00017036691,0.00041857103],"domain_scores_gemma":[0.9983911,0.00018142104,0.00033512322,0.00081504753,0.00021450757,0.00006283438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0044901106,0.00022868441,0.0010765289,0.000224134,0.00006489871,0.000007286617,0.00023450206,0.0003435861,0.000008525307],"category_scores_gemma":[0.0062158005,0.00017809989,0.00019428036,0.0001377866,0.00044231612,0.000024165653,0.00030171493,0.0002782768,0.000003446612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015039471,0.00007426179,0.20331457,0.0000151278,0.00008180481,0.00010740329,0.00008227083,0.0000024957317,0.7842709,0.00014971154,0.000013409638,0.011737656],"study_design_scores_gemma":[0.0011096909,0.00027890244,0.3444189,0.00017934549,0.000027368926,0.000031168274,0.000019388182,0.0002001039,0.6529808,0.000320029,0.00029749426,0.00013679493],"about_ca_topic_score_codex":0.0003743689,"about_ca_topic_score_gemma":0.000044645654,"teacher_disagreement_score":0.14110434,"about_ca_system_score_codex":0.00014532125,"about_ca_system_score_gemma":0.00006981651,"threshold_uncertainty_score":0.74413425},"labels":[],"label_agreement":null},{"id":"W2580874098","doi":"10.1007/978-1-4939-6625-7_23","title":"Isolation and Differentiation of Murine Macrophages","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":87,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"British Heart Foundation","keywords":"Macrophage; Adipose tissue macrophages; Inflammation; Macrophage colony-stimulating factor; Immunology; Colony-stimulating factor; Peritoneal cavity; Bone marrow; Biology; Macrophage-activating factor; Population; Phenotype; Adipose tissue; Pathology; Cell biology; Medicine; Haematopoiesis; In vitro; Stem cell; White adipose tissue; Endocrinology; Anatomy","score_opus":0.01743046641850773,"score_gpt":0.369778152082454,"score_spread":0.3523476856639463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2580874098","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48487368,0.0052678627,0.5079908,0.00012827812,0.00080988987,0.00013090044,0.0000053857593,0.0000104051505,0.0007828534],"genre_scores_gemma":[0.8194101,0.0001894982,0.18003863,0.00003803059,0.000007997522,0.000012713195,0.000020447782,0.00000925307,0.0002733411],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877983,0.00062329555,0.00022394421,0.0002064022,0.000008913971,0.0001576244],"domain_scores_gemma":[0.9992421,0.000114705865,0.00021157457,0.00039499401,0.0000311152,0.000005464358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005189973,0.00009605164,0.00024062891,0.00009144957,0.00008283298,0.000006438023,0.00019881123,0.00022996367,0.00011510784],"category_scores_gemma":[0.00035361602,0.00008792386,0.000036015143,0.000027244923,0.00036223256,0.00002843592,0.000179466,0.00015140434,0.000005182882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035786346,0.000020250081,0.022585694,0.000014787566,0.0000359853,0.0000012566816,0.000068871304,0.0000015555747,0.9391496,0.0023162677,0.0000062641184,0.035763666],"study_design_scores_gemma":[0.0007434501,0.000080473474,0.07386605,0.000013433219,0.00001600159,0.000007963365,0.000013007142,0.00002696511,0.9189206,0.0054318774,0.0007963106,0.00008391508],"about_ca_topic_score_codex":0.00009693416,"about_ca_topic_score_gemma":0.000008900241,"teacher_disagreement_score":0.3345364,"about_ca_system_score_codex":0.000013772785,"about_ca_system_score_gemma":0.000010858711,"threshold_uncertainty_score":0.3585431},"labels":[],"label_agreement":null},{"id":"W2580913024","doi":"10.1007/978-1-4939-6625-7_25","title":"Isolation of Immune Cells for Adoptive Transfer","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sodium Intake and Health","field":"Nursing","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Adoptive cell transfer; Immune system; IL-2 receptor; Immunology; Isolation (microbiology); Biology; Cell biology; T cell; Microbiology","score_opus":0.057011865152497856,"score_gpt":0.457741440668262,"score_spread":0.40072957551576416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2580913024","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.077068344,0.00025743438,0.9203415,0.0005068608,0.0007821381,0.00033519673,0.000010214123,0.000008463221,0.0006898728],"genre_scores_gemma":[0.31882694,0.000009933418,0.6808953,0.00018114128,0.000030884523,0.000024728768,0.0000063509174,0.000011417879,0.000013272809],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884325,0.00044019957,0.0002963592,0.00019001866,0.000027411877,0.00020273171],"domain_scores_gemma":[0.9992442,0.00022584407,0.00009918707,0.00035318104,0.000055591998,0.000021967935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011087309,0.00008521703,0.00027264564,0.00008219948,0.000088025416,0.000006836294,0.00019405698,0.00017944774,0.000015136811],"category_scores_gemma":[0.00029140819,0.00008134464,0.00010392038,0.000035247092,0.00011892853,0.000026690686,0.000018872171,0.00011290159,0.0000014403738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022236042,0.000029300672,0.0010689924,0.000034461187,0.000010411928,5.933843e-7,0.0003744122,0.000007791559,0.9601917,0.0034271472,0.000005653018,0.034627173],"study_design_scores_gemma":[0.00069975917,0.0004334513,0.0048717693,0.000017895714,0.000019857927,8.5847387e-7,0.000053617277,0.0005209523,0.9779371,0.014308562,0.0010503021,0.00008590136],"about_ca_topic_score_codex":0.00019262325,"about_ca_topic_score_gemma":0.000021444259,"teacher_disagreement_score":0.2417586,"about_ca_system_score_codex":0.000026492595,"about_ca_system_score_gemma":0.000016860375,"threshold_uncertainty_score":0.3317138},"labels":[],"label_agreement":null},{"id":"W2580990313","doi":"10.1007/978-1-4939-6813-8_16","title":"Brassinosteroid Action in Plant Abiotic Stress Tolerance","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Brassinosteroid; Abiotic stress; Arabidopsis; Arabidopsis thaliana; Biology; Abiotic component; Brassica; Rapeseed; Fight-or-flight response; Biotic stress; Botany; Gene; Genetics; Mutant; Ecology","score_opus":0.0527720116457589,"score_gpt":0.38149178760854885,"score_spread":0.32871977596278995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2580990313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99520195,0.0004525512,0.002586624,0.00081238773,0.0002917375,0.00014377371,0.00008909182,0.000016554452,0.00040531246],"genre_scores_gemma":[0.98227817,0.00020886183,0.017097272,0.00022603382,0.00006778432,0.000019653507,0.00004729671,0.0000012038295,0.000053702595],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984215,0.0006175307,0.00022114883,0.00035716375,0.000057437097,0.00032522302],"domain_scores_gemma":[0.9994104,0.00025239092,0.00013279264,0.00014707563,0.000012771336,0.000044600063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004121902,0.00013732992,0.00025691956,0.000027328968,0.00012916254,0.00005523625,0.00044059576,0.00017989558,0.000039787436],"category_scores_gemma":[0.00022306202,0.00006173147,0.000054980872,0.000087307315,0.000104868086,0.000063470216,0.0001071329,0.00019919279,0.0000053799577],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007990917,0.00004101767,0.06578491,0.000005038413,0.0000029648734,0.000065920074,0.000016592861,0.000017452212,0.7500328,0.00018707369,0.000003488012,0.18376286],"study_design_scores_gemma":[0.00032114156,0.00011777685,0.80200446,0.000076689044,0.0000027994524,0.000021595852,0.000027945329,0.0008275506,0.19020328,0.0015981285,0.004576647,0.0002219769],"about_ca_topic_score_codex":0.0007525431,"about_ca_topic_score_gemma":0.002879489,"teacher_disagreement_score":0.7362196,"about_ca_system_score_codex":0.000022882523,"about_ca_system_score_gemma":0.000006237766,"threshold_uncertainty_score":0.25173366},"labels":[],"label_agreement":null},{"id":"W2581124908","doi":"10.1007/978-1-4939-6750-6_15","title":"Computational Haplotype Inference from Pooled Samples","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Inference; Haplotype; Genotyping; DNA sequencing; Computational biology; Computer science; Population; 1000 Genomes Project; Biology; Genetics; Artificial intelligence; Genotype; Single-nucleotide polymorphism; Gene; Medicine","score_opus":0.049837691572744695,"score_gpt":0.43132897641364787,"score_spread":0.38149128484090317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2581124908","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29753956,0.00047395352,0.700382,0.00048336646,0.00021977561,0.00009652277,0.000035624224,0.000008151112,0.0007610263],"genre_scores_gemma":[0.43456882,0.00004977794,0.56452143,0.00048488734,0.000070165916,0.000022127942,0.00022311453,0.000012579494,0.000047114732],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99792206,0.0008687447,0.00033211068,0.0005094738,0.000050683917,0.00031695302],"domain_scores_gemma":[0.9987175,0.0002127614,0.00023861231,0.0006844195,0.00008362651,0.00006310316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008765966,0.00017434308,0.00030892433,0.000059384347,0.00016846733,0.000029208377,0.0005264732,0.00035829213,0.000050715716],"category_scores_gemma":[0.0034708164,0.0001715337,0.00009852289,0.000039356903,0.00024317918,0.000002688079,0.00034274586,0.00014821134,0.000014640811],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034782992,0.000051454917,0.29988787,0.0000028441634,0.00012726709,0.000005408703,0.00003389148,0.0016989919,0.6708186,0.003231821,0.00011997006,0.023987068],"study_design_scores_gemma":[0.0015075778,0.00033922258,0.7057182,0.000016742944,0.000056835106,0.000007086769,0.00005705774,0.0036049688,0.060449746,0.2132358,0.014381826,0.00062492833],"about_ca_topic_score_codex":0.0004631514,"about_ca_topic_score_gemma":0.00013566818,"teacher_disagreement_score":0.6103689,"about_ca_system_score_codex":0.000017447837,"about_ca_system_score_gemma":0.00008485202,"threshold_uncertainty_score":0.6994941},"labels":[],"label_agreement":null},{"id":"W2581290476","doi":"10.1007/978-1-4939-6625-7_14","title":"Intracellular Free Calcium Measurement Using Confocal Imaging","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Confocal; Confocal microscopy; Intracellular; Microscopy; Fluorescence; Calcium in biology; Biophysics; Materials science; Fluorescence microscope; Nanotechnology; Biological system; Biomedical engineering; Computer science; Chemistry; Optics; Biology; Cell biology; Biochemistry; Physics; Engineering","score_opus":0.06386367672798125,"score_gpt":0.4027732318002565,"score_spread":0.3389095550722752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2581290476","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.063616544,0.0024172596,0.9322218,0.00016008221,0.00065727474,0.00019956219,0.0000059059366,0.000011137772,0.0007104472],"genre_scores_gemma":[0.30874327,0.000031282187,0.69065505,0.0002787188,0.00018556906,0.0000204052,0.000015247654,0.000040347324,0.000030085823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977098,0.0006879319,0.00036448747,0.00060709077,0.00014379028,0.00048689757],"domain_scores_gemma":[0.99831843,0.000014955019,0.00020908068,0.0012252566,0.00013314998,0.00009910736],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025092135,0.00025249773,0.00031862364,0.00008842929,0.00022463402,0.00007070992,0.0008145985,0.00027258915,0.000057123212],"category_scores_gemma":[0.0011523961,0.00024888685,0.00015293113,0.00004220619,0.00021924537,0.0000053630865,0.00054754457,0.00021514721,0.0000025481993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003069536,0.000028481893,0.001141955,0.000008697456,0.000044728025,0.00002971605,0.00001584665,0.000070656075,0.9842118,0.0016099305,0.000022078091,0.012785406],"study_design_scores_gemma":[0.0007117731,0.00008353083,0.00010830784,0.00002226143,0.000026319258,0.000026342463,0.0000349345,0.0022439812,0.9855186,0.0051146555,0.005808356,0.00030094752],"about_ca_topic_score_codex":0.00018632575,"about_ca_topic_score_gemma":0.00001932371,"teacher_disagreement_score":0.24512672,"about_ca_system_score_codex":0.000046376274,"about_ca_system_score_gemma":0.0000992052,"threshold_uncertainty_score":0.99999636},"labels":[],"label_agreement":null},{"id":"W2581428765","doi":"10.1007/978-1-4939-6625-7_21","title":"Isolation and Characterization of Circulating Microparticles by Flow Cytometry","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"","keywords":"Flow cytometry; Microparticle; Isolation (microbiology); Cytometry; Chemistry; Characterization (materials science); Molecular biology; Biology; Nanotechnology; Materials science; Microbiology","score_opus":0.014227483382665596,"score_gpt":0.3598740781657924,"score_spread":0.3456465947831268,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2581428765","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5373528,0.00045397299,0.46195862,0.000040968018,0.00004632671,0.00007716625,0.000014700684,0.0000030979088,0.000052356565],"genre_scores_gemma":[0.70315605,0.000050948536,0.29656908,0.000059649927,0.000023435694,0.000009067137,0.00010107267,0.000014844705,0.000015853375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874085,0.0004144977,0.00027605754,0.0003404471,0.00004369238,0.00018442408],"domain_scores_gemma":[0.99913913,0.000022001508,0.00023695042,0.0005058194,0.000045909183,0.00005019014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006498752,0.00012391395,0.00017998135,0.000062940264,0.00008055234,0.000023659386,0.00021721596,0.00018839362,0.0000063441344],"category_scores_gemma":[0.0006139148,0.00013291843,0.000049329094,0.00005167473,0.00023161738,0.000006724718,0.00020199934,0.0000745908,6.0130907e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028086186,0.000033787324,0.049296115,0.000019436327,0.000018954877,0.0000028709335,0.000019504045,0.0000053676868,0.9287082,0.000114728406,0.0000025552076,0.021750422],"study_design_scores_gemma":[0.00038380816,0.00007555586,0.020273522,0.000011768826,0.000013240214,0.000007172656,0.000009295112,0.0017451289,0.9764136,0.0006919582,0.00023825999,0.00013666182],"about_ca_topic_score_codex":0.000011176934,"about_ca_topic_score_gemma":0.0000017557966,"teacher_disagreement_score":0.16580327,"about_ca_system_score_codex":0.000008063595,"about_ca_system_score_gemma":0.000019099962,"threshold_uncertainty_score":0.5420256},"labels":[],"label_agreement":null},{"id":"W2581893804","doi":"10.1007/978-1-4939-6625-7_27","title":"Isolation and Culture of Vascular Smooth Muscle Cells from Small and Large Vessels","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"British Heart Foundation","keywords":"Vascular smooth muscle; Cell biology; Primary culture; In vitro; Isolation (microbiology); Smooth muscle; Biology; Anatomy; Bioinformatics; Biochemistry; Endocrinology","score_opus":0.013519340692970628,"score_gpt":0.3115276299550799,"score_spread":0.29800828926210926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2581893804","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51071733,0.0035827577,0.48521614,0.000028644476,0.00019884024,0.00010291911,0.0000502744,0.000003328543,0.00009976776],"genre_scores_gemma":[0.39641416,0.0018680939,0.6011148,0.00024100534,0.00013780841,0.000013489862,0.00012530187,0.000024802268,0.000060552185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878097,0.00039427084,0.00020223926,0.0004058611,0.000029490393,0.00018714991],"domain_scores_gemma":[0.9992658,0.00001781055,0.00015148091,0.00047598607,0.000041884705,0.000047049773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005780301,0.00014641946,0.00025121853,0.000045821405,0.000085455875,0.000017811482,0.0001609998,0.00032455355,0.000009303543],"category_scores_gemma":[0.00024891313,0.00013498218,0.000056271496,0.000030832878,0.00014330566,0.000004909259,0.00022658905,0.000103383645,5.8025324e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002715147,0.00002531684,0.0018772363,0.000015223444,0.000028378436,0.000001270501,0.00011295512,0.0000030570775,0.9843645,0.00017405278,0.00004660659,0.0133242635],"study_design_scores_gemma":[0.000962799,0.00013476114,0.021784715,0.000015391066,0.00004343827,9.733374e-7,0.00004606869,0.00007885483,0.91370934,0.002596662,0.060435362,0.00019160591],"about_ca_topic_score_codex":0.00019595279,"about_ca_topic_score_gemma":0.000064795146,"teacher_disagreement_score":0.11589866,"about_ca_system_score_codex":0.0000032514774,"about_ca_system_score_gemma":0.000014373747,"threshold_uncertainty_score":0.5504413},"labels":[],"label_agreement":null},{"id":"W2581989372","doi":"10.1007/978-1-4939-6625-7_20","title":"Assessment of Caveolae/Lipid Rafts in Isolated Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"British Heart Foundation","keywords":"Caveolae; Lipid raft; Sphingolipid; Phosphorylation; Cell biology; Cell; Biology; Chemistry; Computational biology; Biochemistry; Signal transduction","score_opus":0.016351683966638036,"score_gpt":0.4048613133198259,"score_spread":0.38850962935318784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2581989372","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4003473,0.0008396639,0.59466904,0.00008164909,0.00034457477,0.00023278428,0.0000121704215,0.000006407483,0.0034663938],"genre_scores_gemma":[0.78511804,0.00027612995,0.21410346,0.0001437016,0.000056715737,0.000033871376,0.00004863959,0.00002666381,0.00019275825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979178,0.0005770568,0.0004776979,0.0005598514,0.000076951954,0.0003906866],"domain_scores_gemma":[0.9985839,0.000039642786,0.00028396057,0.00094376743,0.0000861998,0.0000625147],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013451572,0.00022473047,0.00043024484,0.00015031217,0.000060617072,0.000021177351,0.0006242831,0.00041736686,0.000030304063],"category_scores_gemma":[0.00036986612,0.00022269065,0.00013025258,0.00010825969,0.00025623877,0.000004463325,0.00038158003,0.00023348603,0.0000018479938],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004235579,0.00010653,0.028042091,0.000038181344,0.000032683078,0.00002434101,0.000020606429,0.00009423691,0.9673835,0.0004929214,0.0000115103,0.0037110322],"study_design_scores_gemma":[0.0009892787,0.0002860033,0.0069172806,0.000025511084,0.000013570793,0.000010325454,0.00002492774,0.00063036254,0.98613584,0.0010956345,0.0036137253,0.00025755476],"about_ca_topic_score_codex":0.00016970214,"about_ca_topic_score_gemma":0.0001552083,"teacher_disagreement_score":0.38477078,"about_ca_system_score_codex":0.000018470033,"about_ca_system_score_gemma":0.00014330306,"threshold_uncertainty_score":0.90810615},"labels":[],"label_agreement":null},{"id":"W2582267945","doi":"10.1007/978-1-4939-6625-7_30","title":"Generation of a Mouse Model with Smooth Muscle Cell Specific Loss of the Expression of PPARγ","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Cre recombinase; Peroxisome proliferator-activated receptor; Biology; Transcription factor; Molecular biology; Estrogen receptor; Receptor; Endocrinology; Angiotensin II; Knockout mouse; Internal medicine; Cell biology; Transgene; Gene; Genetically modified mouse; Biochemistry; Genetics","score_opus":0.038232899980857056,"score_gpt":0.3444664138845077,"score_spread":0.30623351390365067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2582267945","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7068502,0.0003649525,0.2923071,0.000021501106,0.00006152229,0.00015950018,0.00002010839,0.0000018168904,0.00021331935],"genre_scores_gemma":[0.7382469,0.00012505801,0.2614869,0.000019227453,0.000020247917,0.00001599271,0.000013986788,0.00001845649,0.00005323677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99851066,0.0005397252,0.00034206174,0.00033517563,0.00009291757,0.00017946927],"domain_scores_gemma":[0.9983261,0.000016017431,0.0004901565,0.001017633,0.00011838709,0.00003165949],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004868085,0.00015872315,0.00029835117,0.000061495804,0.000055025117,0.000005230896,0.0005307749,0.00027526694,0.000005956245],"category_scores_gemma":[0.00014869182,0.000109550776,0.00010158386,0.0000677936,0.0004432779,0.000004687793,0.00026195656,0.00012768533,1.4461877e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009766279,0.000105172396,0.0036078354,0.000026588623,0.000014397532,4.3046538e-7,0.00005008013,0.0016787973,0.9933971,0.000105671155,0.000020676012,0.00089556846],"study_design_scores_gemma":[0.000599067,0.00019455646,0.00022720892,0.00001971557,0.0000092511755,9.1172694e-7,0.000017471704,0.00052066956,0.99779403,0.00018500294,0.00031476317,0.00011737893],"about_ca_topic_score_codex":0.000021936095,"about_ca_topic_score_gemma":0.000006127851,"teacher_disagreement_score":0.03139675,"about_ca_system_score_codex":0.000011342895,"about_ca_system_score_gemma":0.000082600185,"threshold_uncertainty_score":0.44673508},"labels":[],"label_agreement":null},{"id":"W2582822681","doi":"10.1007/978-1-4939-6625-7_13","title":"Techniques for the Evaluation of the Genetic Expression, Intracellular Storage, and Secretion of Polypeptide Hormones with Special Reference to the Natriuretic Peptides (NPs)","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heart Failure Treatment and Management","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Secretion; Hormone; Intracellular; Peptide hormone; Computational biology; Cell biology; Biology; Chemistry; Endocrinology","score_opus":0.050087811205737916,"score_gpt":0.4090967801750409,"score_spread":0.359008968969303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2582822681","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40966856,0.0013341527,0.57956374,0.0056641963,0.00008872384,0.0032047955,0.0000049318733,0.0000082299175,0.00046269223],"genre_scores_gemma":[0.63713986,0.000070445814,0.3624261,0.00006969995,0.000056835463,0.00019308116,0.0000023675746,0.0000071517206,0.000034478297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876964,0.0006142859,0.00018670307,0.00017247997,0.0001463041,0.00011058391],"domain_scores_gemma":[0.99895465,0.00016810885,0.00015797369,0.00056935387,0.00013065294,0.000019274747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021235517,0.00009420098,0.00018971512,0.000053511747,0.00011282293,0.0000086552445,0.00018708938,0.00007081944,0.000008424381],"category_scores_gemma":[0.0007104054,0.000040228184,0.00003988747,0.00006525663,0.00023833386,0.000012446322,0.00010755948,0.000084608,1.5942895e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020414354,0.00003575898,0.0034677575,0.000036619447,0.0000578435,0.0000013395038,0.00034841883,0.00003540635,0.8890626,0.0016406593,0.0001239442,0.104985505],"study_design_scores_gemma":[0.0010971111,0.0009977088,0.07848953,0.00018350664,0.0005742654,0.000010970292,0.0003438504,0.00076268136,0.89958525,0.0058876975,0.011955171,0.000112236856],"about_ca_topic_score_codex":0.00007073551,"about_ca_topic_score_gemma":0.00006205249,"teacher_disagreement_score":0.22747128,"about_ca_system_score_codex":0.000022677605,"about_ca_system_score_gemma":0.000047243957,"threshold_uncertainty_score":0.16404578},"labels":[],"label_agreement":null},{"id":"W2583806724","doi":"10.1007/978-1-4939-6788-9_12","title":"Characterizing Satellite Cells and Myogenic Progenitors During Skeletal Muscle Regeneration","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Ottawa Hospital; University of Ottawa","funders":"","keywords":"MyoD; Myogenin; Skeletal muscle; Myocyte; Regeneration (biology); Satellite; Progenitor cell; Biology; Cell biology; Myogenesis; Stem cell; MyoD Protein; Anatomy","score_opus":0.014150975176804146,"score_gpt":0.33788054476817936,"score_spread":0.3237295695913752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2583806724","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96786976,0.0014897219,0.029621692,0.00014432704,0.0003048579,0.00021324701,0.0000062369313,0.0000113205215,0.00033884152],"genre_scores_gemma":[0.9160589,0.00076284935,0.08260968,0.00019757639,0.00014874992,0.000054557204,0.000064600536,0.00002718188,0.00007589341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983226,0.0005114989,0.00023818058,0.0005558821,0.000037262893,0.0003345859],"domain_scores_gemma":[0.9991355,0.000015974758,0.0001576247,0.0005945138,0.000030103347,0.00006630261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048249084,0.00019695966,0.0002197093,0.000067796645,0.0002446967,0.000035229215,0.00026330448,0.00031729997,0.000007797522],"category_scores_gemma":[0.00020038993,0.0001992792,0.00008806481,0.00003551682,0.0002711835,0.000007948098,0.00027059158,0.00014493433,0.0000030122642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004149497,0.000026033867,0.0027786712,0.00001829576,0.000029782466,0.00000632802,0.000031707157,0.000006132024,0.9723727,0.00019855303,0.0000017061809,0.02448856],"study_design_scores_gemma":[0.0005113317,0.00013038704,0.037274156,0.000007038785,0.000011514037,0.000008601605,0.000018598636,0.00003539201,0.95795864,0.00075516186,0.003060817,0.00022833925],"about_ca_topic_score_codex":0.000022519069,"about_ca_topic_score_gemma":0.000020672409,"teacher_disagreement_score":0.052987993,"about_ca_system_score_codex":0.00000934447,"about_ca_system_score_gemma":0.000027783908,"threshold_uncertainty_score":0.812637},"labels":[],"label_agreement":null},{"id":"W2584760282","doi":"10.1007/978-1-4939-6783-4_11","title":"Functional Interaction Network Construction and Analysis for Disease Discovery","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":169,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"","keywords":"Computer science; Biological network; Visualization; Classifier (UML); Bayesian network; Interaction network; Machine learning; Data mining; Artificial intelligence; Naive Bayes classifier; Network analysis; Computational biology; Support vector machine; Engineering; Gene; Biology","score_opus":0.01992820384485012,"score_gpt":0.35627087400099866,"score_spread":0.33634267015614855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2584760282","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041312568,0.00046062918,0.95714337,0.00018029416,0.0004949818,0.00017349367,0.00002465797,0.000003845137,0.00020618927],"genre_scores_gemma":[0.29611558,0.00013515828,0.70246553,0.00032420727,0.00030005127,0.00007425307,0.00042729586,0.000013779762,0.00014412611],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9990926,0.00014421954,0.00022275103,0.0003046239,0.000027792528,0.00020803919],"domain_scores_gemma":[0.9992796,0.00004032182,0.00017836648,0.00040379693,0.000036969734,0.000060904455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058842835,0.0001244749,0.00019344378,0.000069663176,0.00017678727,0.000073340314,0.00012624961,0.00015581127,0.0000056055956],"category_scores_gemma":[0.0001731797,0.00011849675,0.0001398852,0.000054706572,0.00018668475,0.000009497411,0.00014993163,0.000084571184,3.8895178e-7],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014160264,0.000084843385,0.32448906,0.0000710574,0.0015168866,0.0000057242014,0.00003506334,0.011416508,0.3583511,0.04608548,0.0005799766,0.25594828],"study_design_scores_gemma":[0.006464642,0.0011080346,0.39516678,0.00008306793,0.0021112235,0.00007005802,0.00022786463,0.09990476,0.048334956,0.3552214,0.08895669,0.0023505404],"about_ca_topic_score_codex":0.000010728884,"about_ca_topic_score_gemma":0.000026337022,"teacher_disagreement_score":0.31001616,"about_ca_system_score_codex":0.000011252384,"about_ca_system_score_gemma":0.000028764825,"threshold_uncertainty_score":0.48321572},"labels":[],"label_agreement":null},{"id":"W2585167862","doi":"10.1007/978-1-4939-6788-9_14","title":"Tissue Fixation and Processing for the Histological Identification of Lipids","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"European Regional Development Fund; Instituto de Salud Carlos III; Ministerio de Economía y Competitividad","keywords":"Fixation (population genetics); Staining; Pathology; Biology; Chemistry; Biochemistry; Medicine","score_opus":0.033966282533460915,"score_gpt":0.4464562735195361,"score_spread":0.4124899909860752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2585167862","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02697568,0.0017367733,0.96980464,0.00080646464,0.000061705716,0.0004633339,0.000010508184,0.000006839082,0.00013404145],"genre_scores_gemma":[0.5754652,0.00019753374,0.42369312,0.00014156014,0.00004386202,0.00031872175,0.000047491798,0.000011532499,0.00008097777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902123,0.00019231105,0.00028164661,0.00033194196,0.000027638998,0.00014521954],"domain_scores_gemma":[0.99897975,0.00005214607,0.00030224837,0.0005662126,0.00007884205,0.000020808657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010449383,0.000103737795,0.00015572288,0.00003640029,0.00019924453,0.000019524157,0.00036502935,0.00024609585,0.0000018964571],"category_scores_gemma":[0.0008062977,0.00007806608,0.000049946633,0.00003488694,0.00043935888,0.0000025913657,0.00015511514,0.000073995616,1.8227898e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019917554,0.000017821336,0.0009796759,0.000012719055,0.000010484818,1.7562583e-7,0.000009905199,0.00000441117,0.86582893,0.0057979347,0.000022880587,0.12729517],"study_design_scores_gemma":[0.00023968496,0.00016704013,0.0052014044,0.0000057188263,0.00002391296,0.000008335794,0.000012581411,0.00054395746,0.964364,0.008271054,0.021055758,0.00010655924],"about_ca_topic_score_codex":0.00001808898,"about_ca_topic_score_gemma":0.000009656732,"teacher_disagreement_score":0.5484895,"about_ca_system_score_codex":0.0000065022077,"about_ca_system_score_gemma":0.000025425936,"threshold_uncertainty_score":0.31834424},"labels":[],"label_agreement":null},{"id":"W2585888978","doi":"10.1007/978-1-4939-6646-2_4","title":"Multifunctional Concentric FRET-Quantum Dot Probes for Tracking and Imaging of Proteolytic Activity","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs; Michael Smith Health Research BC","keywords":"Förster resonance energy transfer; Alexa Fluor; Proteases; Nanotechnology; Quantum dot; Fluorescence; Biophysics; Chemistry; Materials science; Biochemistry; Biology; Physics; Optics","score_opus":0.027755606205362392,"score_gpt":0.4080477434599369,"score_spread":0.3802921372545745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2585888978","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39330605,0.00035642047,0.605792,0.00012437045,0.00005794139,0.00030740388,0.0000134364145,0.000008754022,0.000033647444],"genre_scores_gemma":[0.6193207,0.000044164706,0.38049266,0.000040683823,0.000031843963,0.000032186363,0.000013491578,0.000010452252,0.0000138194655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99877393,0.00025747163,0.00023094146,0.00045243156,0.00004690674,0.00023830646],"domain_scores_gemma":[0.9990975,0.00006117928,0.00027644186,0.00041212732,0.00011676784,0.000035957517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008162363,0.00016224924,0.0002905617,0.00006962333,0.00012903959,0.000021384181,0.00018998489,0.00016974345,5.8515644e-7],"category_scores_gemma":[0.0009929372,0.00014265107,0.00010996503,0.00004846996,0.0004171325,0.00000623146,0.00015530577,0.00010407771,5.2081475e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009952774,0.000040378964,0.013869109,0.000029255547,0.00003600693,0.0000020519246,0.0000069131565,0.0000030051528,0.92738414,0.00043580087,0.0000038877274,0.058089957],"study_design_scores_gemma":[0.00052672415,0.000166342,0.004360397,0.000024274901,0.000029750394,0.0000125711,0.000011637869,0.0014816024,0.98816067,0.004485495,0.0005712584,0.00016925216],"about_ca_topic_score_codex":0.000027506609,"about_ca_topic_score_gemma":0.000009183516,"teacher_disagreement_score":0.22601467,"about_ca_system_score_codex":0.000013146117,"about_ca_system_score_gemma":0.000036380337,"threshold_uncertainty_score":0.5817142},"labels":[],"label_agreement":null},{"id":"W2586148124","doi":"10.1007/978-1-4939-6747-6_10","title":"Parallel Exploration of Interaction Space by BioID and Affinity Purification Coupled to Mass Spectrometry","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network; Princess Margaret Cancer Centre; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Biotinylation; Mass spectrometry; Proteomics; Context (archaeology); Protein–protein interaction; Computational biology; Tandem affinity purification; Function (biology); Biological system; Lysis; Biotin; Chemistry; Computer science; Biophysics; Affinity chromatography; Biology; Biochemistry; Cell biology; Chromatography","score_opus":0.030573367961760318,"score_gpt":0.3885998656166207,"score_spread":0.3580264976548604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586148124","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15312643,0.0011995657,0.84335715,0.001440618,0.00019995327,0.00020377249,0.000007425911,0.000005964291,0.0004591115],"genre_scores_gemma":[0.256864,0.00091187394,0.74189657,0.00009233486,0.000032929926,0.000027382823,0.00003502059,0.0000126612895,0.00012721909],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989013,0.00031670128,0.00022341186,0.0003524127,0.000041741056,0.00016444863],"domain_scores_gemma":[0.9992772,0.000027288022,0.00019023445,0.0004032956,0.000057789035,0.00004422132],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005964274,0.00013177474,0.0002099936,0.00009050025,0.000092202834,0.000018084129,0.00017514407,0.00027188763,0.0000040918007],"category_scores_gemma":[0.0006139771,0.00012140954,0.000045005978,0.00007071211,0.00016190125,0.000007154595,0.00013332927,0.00012955249,0.0000017004448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090052534,0.000036978665,0.0014444168,0.000011208465,0.000046963538,8.245203e-7,0.00004819354,0.00001874123,0.9954365,0.0005961804,0.0000968066,0.0021731292],"study_design_scores_gemma":[0.00040656122,0.00030349096,0.0017061802,0.000011288479,0.000014124456,0.0000027917124,0.0001149789,0.00013610188,0.9935261,0.0013478969,0.0022888088,0.00014165165],"about_ca_topic_score_codex":0.000054812925,"about_ca_topic_score_gemma":0.000017129138,"teacher_disagreement_score":0.10373758,"about_ca_system_score_codex":0.000012907781,"about_ca_system_score_gemma":0.000013872622,"threshold_uncertainty_score":0.49509373},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2586584461","doi":"10.1007/978-1-4939-6759-9_5","title":"Using Digital Quantification of Stained Tissue Microarrays as a Medium-Throughput, Quantitative Method for Measuring the Kinetics of Signal Transduction","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Tissue microarray; DNA microarray; Protein microarray; Computational biology; Transduction (biophysics); Signal transduction; Throughput; Immunohistochemistry; Biology; Cell biology; Computer science; Biophysics; Biochemistry; Gene expression; Gene; Immunology","score_opus":0.20833832949128106,"score_gpt":0.5520613957039319,"score_spread":0.3437230662126508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586584461","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029615598,0.0005757994,0.9673822,0.0010099004,0.00016920321,0.0009783764,0.00003670917,0.000007997365,0.00022421038],"genre_scores_gemma":[0.23427051,0.000026399992,0.7655374,0.000023525234,0.000037130125,0.00004680339,0.00001528068,0.00002490212,0.00001805405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752253,0.0010756189,0.00056063005,0.00035814237,0.00019999324,0.00028308673],"domain_scores_gemma":[0.9976834,0.00080495904,0.00038250457,0.00063321827,0.000446916,0.00004897732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034673421,0.0001502154,0.0005193366,0.000187401,0.000079395344,0.000020013667,0.00034530525,0.00018694079,0.00002375425],"category_scores_gemma":[0.004007764,0.00011717319,0.00012833007,0.00018247489,0.0005996245,0.000051773368,0.00006672967,0.00022776682,5.005381e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042768253,0.00008972895,0.00034027366,0.00022146363,0.00009847378,0.0000039998254,0.00070429995,0.0001845513,0.95302165,0.0038209176,0.0000025380903,0.041084398],"study_design_scores_gemma":[0.000903158,0.0009387042,0.00033655448,0.00010686356,0.00008369418,0.000025144489,0.0004702644,0.003587906,0.98543847,0.0070539815,0.00095607305,0.000099190795],"about_ca_topic_score_codex":0.00037012683,"about_ca_topic_score_gemma":0.000020392303,"teacher_disagreement_score":0.20465492,"about_ca_system_score_codex":0.00007276699,"about_ca_system_score_gemma":0.00019650807,"threshold_uncertainty_score":0.47979575},"labels":[],"label_agreement":null},{"id":"W2586762673","doi":"10.1007/978-1-4939-6747-6_11","title":"LUMIER: A Discovery Tool for Mammalian Protein Interaction Networks","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Interactome; HEK 293 cells; Protein–protein interaction; Immunoprecipitation; Computational biology; Alternative splicing; Transmembrane protein; Biology; Fusion protein; Cell biology; Gene isoform; Receptor; Cell culture; Genetics; Gene","score_opus":0.02877761653946181,"score_gpt":0.42432298899767823,"score_spread":0.3955453724582164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2586762673","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21089253,0.00031117466,0.7871194,0.00039146998,0.0002668011,0.0006393173,0.00001107541,0.000008549307,0.00035968475],"genre_scores_gemma":[0.72364026,0.00010457387,0.27315736,0.00025162208,0.00043221412,0.00066036964,0.00019465793,0.00004654068,0.0015123755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99810314,0.00032026196,0.00031047952,0.0006437173,0.00006675782,0.0005556359],"domain_scores_gemma":[0.99869335,0.000035034536,0.00017733473,0.00093196053,0.00009794,0.00006437549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011320265,0.00022533712,0.0002721655,0.0000727184,0.00018416761,0.000112883805,0.0006683402,0.00044444285,0.000008964876],"category_scores_gemma":[0.0011524039,0.00021003187,0.00018075138,0.00006355577,0.00031632168,0.000020479163,0.0003314193,0.00022876592,0.0000021612718],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002142903,0.000055762208,0.006113221,0.000031208216,0.000028662993,0.0000067349456,0.0000060686916,0.000009959235,0.9681808,0.00075553544,0.000094920986,0.02450289],"study_design_scores_gemma":[0.0007402928,0.00033100767,0.0007799013,0.000040409865,0.000010424001,0.000013157674,0.000032263724,0.00057327736,0.98203725,0.0009694662,0.014158421,0.0003141533],"about_ca_topic_score_codex":0.00005714298,"about_ca_topic_score_gemma":0.00004023707,"teacher_disagreement_score":0.51396203,"about_ca_system_score_codex":0.000029709978,"about_ca_system_score_gemma":0.00006995164,"threshold_uncertainty_score":0.8564851},"labels":[],"label_agreement":null},{"id":"W2587649883","doi":"10.1007/978-1-4939-6759-9_17","title":"Multiplex Immunohistochemistry for Mapping the Tumor Microenvironment","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Multiplex; Immunohistochemistry; Tumor microenvironment; Signal transduction; Cell biology; Computational biology; Biology; Cancer research; Bioinformatics; Tumor cells; Immunology","score_opus":0.0291283672710968,"score_gpt":0.36800026625574644,"score_spread":0.33887189898464964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2587649883","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16474466,0.012663693,0.8186807,0.0005940702,0.0017027609,0.00077680394,0.000046143126,0.000011161395,0.0007800214],"genre_scores_gemma":[0.088031985,0.0008886894,0.9055858,0.0017758135,0.00141159,0.00079660275,0.00014217672,0.00008269099,0.0012846324],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983738,0.00027265804,0.00030973903,0.000555078,0.0000537008,0.0004350082],"domain_scores_gemma":[0.99833024,0.000050473373,0.0002365038,0.0012921892,0.000034894594,0.00005569928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010576979,0.0002314823,0.00028493503,0.000037804297,0.00030520174,0.000037265367,0.0008201542,0.00020731223,0.000013301956],"category_scores_gemma":[0.0007642838,0.00019054124,0.00022406921,0.000030124951,0.00042386912,0.0000025820418,0.00037696888,0.0001700656,0.000002464408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006402193,0.00003115017,0.0005065442,0.000017346361,0.000051832194,0.0000013688885,0.00003509376,0.000015193908,0.97571874,0.00014669454,0.00032571607,0.023086311],"study_design_scores_gemma":[0.0007985337,0.000052100666,0.0015756314,0.000008732104,0.000017447946,0.000017856853,0.000043775577,0.000051772033,0.63503563,0.0006588794,0.36154428,0.00019537122],"about_ca_topic_score_codex":0.00006125479,"about_ca_topic_score_gemma":0.000011381555,"teacher_disagreement_score":0.36121857,"about_ca_system_score_codex":0.00003071344,"about_ca_system_score_gemma":0.000058801063,"threshold_uncertainty_score":0.7770046},"labels":[],"label_agreement":null},{"id":"W2588972504","doi":"10.1007/978-1-4939-6875-6_12","title":"Measurement of Mitochondrial Cholesterol Import Using a Mitochondria-Targeted CYP11A1 Fusion Construct","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research; Fondation pour la Recherche Médicale; Research Nova Scotia; Nova Scotia Health Research Foundation; Dalhousie Medical Research Foundation","keywords":"Cholesterol side-chain cleavage enzyme; Mitochondrion; Construct (python library); Fusion; Computational biology; Chemistry; Computer science; Biology; Cell biology; Biochemistry; Computer network; Linguistics; Philosophy; Gene","score_opus":0.04141744026206999,"score_gpt":0.3739047439740201,"score_spread":0.3324873037119501,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2588972504","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30421564,0.0006526775,0.6906955,0.000077331635,0.0031293363,0.00052903197,0.000023412804,0.000013206513,0.000663813],"genre_scores_gemma":[0.11708845,0.0000803925,0.8817962,0.00028074472,0.0004941838,0.000060923794,0.00006386233,0.000058457295,0.00007679575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964076,0.0012777513,0.00076962594,0.0008436302,0.00020243875,0.00049891614],"domain_scores_gemma":[0.99753004,0.000025470608,0.00062085513,0.0014387193,0.0002554567,0.00012944384],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011852116,0.00035614715,0.0006212724,0.0002094628,0.00018573042,0.0000319146,0.0006678271,0.00067323964,0.000057935267],"category_scores_gemma":[0.0017916376,0.00034653855,0.00027823105,0.00010325023,0.0005022444,0.000008227636,0.00042172984,0.00027709265,0.0000038239205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003531853,0.0000759663,0.01038746,0.000023007913,0.00007762846,0.000016673286,0.00002694444,0.00004657272,0.98469853,0.00025189455,0.00005862338,0.003983501],"study_design_scores_gemma":[0.0024153504,0.0004712055,0.0016228294,0.000046769295,0.000052817057,0.00010063327,0.000031244763,0.00018306036,0.9879596,0.0006859404,0.0060640927,0.00036641708],"about_ca_topic_score_codex":0.00022401019,"about_ca_topic_score_gemma":0.00010951217,"teacher_disagreement_score":0.19110064,"about_ca_system_score_codex":0.00004503786,"about_ca_system_score_gemma":0.00022091671,"threshold_uncertainty_score":0.9998987},"labels":[],"label_agreement":null},{"id":"W2589622158","doi":"10.1007/978-1-4939-6753-7_15","title":"Modeling Movement Primitives with Hidden Markov Models for Robotic and Biomedical Applications","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gait Recognition and Analysis","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Hidden Markov model; Computer science; Artificial intelligence; Motion (physics); Divergence (linguistics); Motion capture; Sequence (biology); Pattern recognition (psychology); Parametric statistics; Set (abstract data type); Movement (music); Parametric model; Algorithm; Mathematics; Statistics; Physics","score_opus":0.03145782111288619,"score_gpt":0.3601517007620239,"score_spread":0.3286938796491377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2589622158","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045223637,0.00025992905,0.99428844,0.00013794607,0.000022946537,0.00023759896,0.000005048582,0.00003101367,0.0004947166],"genre_scores_gemma":[0.14106758,0.00007845775,0.8584467,0.000072270734,0.000015692782,0.00027227539,0.000020035663,0.0000142032395,0.000012779242],"study_design_codex":"design_other","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9994083,0.000065213746,0.00014227192,0.00019373024,0.000031809224,0.00015864482],"domain_scores_gemma":[0.9996458,0.000046293404,0.000023802892,0.00020864885,0.000026490883,0.000048926813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000293863,0.00009558104,0.0001859665,0.00010474494,0.00007113877,0.000024390953,0.00011985932,0.0000827458,0.0000045344646],"category_scores_gemma":[0.000037444755,0.0000817162,0.00003652265,0.000043664873,0.00008482041,0.000030561358,0.000038065846,0.00007528658,4.3253397e-7],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021351112,0.00008221661,0.00033286816,0.00015561609,0.0003391817,0.0000064278356,0.00015644787,0.1802051,0.25866196,0.014607389,0.0000058028295,0.54542565],"study_design_scores_gemma":[0.0003236268,0.000026690524,0.000038676728,0.000013824051,0.000036629866,0.0000015763583,0.000039276667,0.9609722,0.003388278,0.034984842,0.00006308867,0.00011129489],"about_ca_topic_score_codex":0.00001303764,"about_ca_topic_score_gemma":0.000008774037,"teacher_disagreement_score":0.7807671,"about_ca_system_score_codex":0.00001559221,"about_ca_system_score_gemma":0.000007786959,"threshold_uncertainty_score":0.33322898},"labels":[],"label_agreement":null},{"id":"W2590054934","doi":"10.1007/978-1-4939-6756-8_19","title":"Methods for Long-Term Storage of Murine Bone Marrow-Derived Mesenchymal Stem Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Mesenchymal stem cell; Cryopreservation; Fetal bovine serum; Dimethyl sulfoxide; Andrology; Cell biology; Stem cell; Chemistry; Immunology; Cell; Biology; Biomedical engineering; Embryo; Biochemistry; Medicine","score_opus":0.08632179740995569,"score_gpt":0.4957655708959243,"score_spread":0.4094437734859686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590054934","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21344909,0.0016538225,0.7813906,0.0003806049,0.00043174406,0.0013683503,0.000012895662,0.000024243976,0.0012886199],"genre_scores_gemma":[0.04981915,0.00011832721,0.94811875,0.00011003982,0.000075944794,0.00017903294,0.000019312543,0.000067182285,0.0014922554],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99447435,0.0029031348,0.0008134607,0.00079333864,0.000214476,0.0008012506],"domain_scores_gemma":[0.9960861,0.0011805287,0.00046264657,0.0017288373,0.0002792911,0.00026258797],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0075362627,0.0003457175,0.0013151144,0.00039818746,0.00013717031,0.000026978272,0.00070217735,0.0004809865,0.00021517773],"category_scores_gemma":[0.0019431078,0.00029789808,0.00035601566,0.00018206696,0.000608837,0.00004776184,0.00056509255,0.0004948045,0.0000073010137],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043211196,0.0001471523,0.009533531,0.00046430624,0.00012155245,0.00019800219,0.000071006354,0.0000046622004,0.8610731,0.0005691223,0.000015503052,0.12736994],"study_design_scores_gemma":[0.00266083,0.000895397,0.010368097,0.00010935462,0.00009051709,0.0000625454,0.000028816268,0.0008913293,0.98224235,0.0010431291,0.0013471209,0.00026053115],"about_ca_topic_score_codex":0.00008088251,"about_ca_topic_score_gemma":0.00001200268,"teacher_disagreement_score":0.16672812,"about_ca_system_score_codex":0.00011368219,"about_ca_system_score_gemma":0.00017990032,"threshold_uncertainty_score":0.9999473},"labels":[],"label_agreement":null},{"id":"W2590199534","doi":"10.1007/978-1-4939-6756-8_3","title":"Compact Bone-Derived Multipotent Mesenchymal Stromal Cells (MSCs) for the Treatment of Sjogren’s-like Disease in NOD Mice","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salivary Gland Disorders and Functions","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Mesenchymal stem cell; Bone marrow; NOD mice; Immunology; Adipose tissue; Stromal cell; Nod; Medicine; Cancer research; Pathology; Immune system; Autoimmunity; Diabetes mellitus; Endocrinology","score_opus":0.04546421275309307,"score_gpt":0.40944022122115536,"score_spread":0.3639760084680623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590199534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6840245,0.002855705,0.30954105,0.0014509698,0.0005552977,0.0013202326,0.0000747852,0.000013068634,0.00016437806],"genre_scores_gemma":[0.8363102,0.00025071856,0.16291574,0.00018240704,0.00005388824,0.00013903253,0.000043445274,0.00001836482,0.00008617834],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9988175,0.0002975479,0.00028224173,0.00028254735,0.00005595609,0.00026418857],"domain_scores_gemma":[0.99878925,0.0003807382,0.00012841586,0.0005759588,0.00003744023,0.000088186796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034492626,0.00016265588,0.00041985232,0.00010558295,0.00010001344,0.0000091547445,0.000138039,0.00010040479,0.000025591618],"category_scores_gemma":[0.00025446818,0.000102691425,0.00021701975,0.000055758563,0.00021095312,0.000015671345,0.000030166306,0.00008264457,0.0000011739262],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022027772,0.0015587645,0.22439398,0.000049754337,0.0002031379,0.000108307926,0.00040748203,0.00033192907,0.7510381,0.00034980083,0.000046841804,0.019309139],"study_design_scores_gemma":[0.023618829,0.004574706,0.76785475,0.00009966381,0.00077303615,0.000023987413,0.00069216435,0.025189696,0.16110566,0.0025904418,0.012952306,0.0005247622],"about_ca_topic_score_codex":0.00084068073,"about_ca_topic_score_gemma":0.00010305579,"teacher_disagreement_score":0.58993244,"about_ca_system_score_codex":0.0000448534,"about_ca_system_score_gemma":0.00006370715,"threshold_uncertainty_score":0.4187635},"labels":[],"label_agreement":null},{"id":"W2590326771","doi":"10.1007/978-1-4939-6756-8_2","title":"Derivation of Mesenchymal Stem Cells from Embryonic Stem Cells: A Non-Variable and Inexhaustive Source of Adult Stem Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Mesenchymal stem cell; Stem cell; Embryonic stem cell; Regenerative medicine; Biology; Cell biology; Computer science; Genetics","score_opus":0.03944262188565194,"score_gpt":0.3830941436241327,"score_spread":0.34365152173848074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590326771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62526226,0.0006105586,0.3720042,0.00008352818,0.00024744167,0.00083584705,0.00003421951,0.000014070567,0.0009078552],"genre_scores_gemma":[0.5611877,0.0002770604,0.4362729,0.00011040961,0.00008202126,0.00007014317,0.000014127714,0.00007623591,0.0019094503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956986,0.0015891398,0.000897477,0.0008310947,0.00036593073,0.0006177651],"domain_scores_gemma":[0.9963043,0.0009799487,0.00075087283,0.0012895355,0.0004550173,0.00022035278],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00232275,0.00036469148,0.0012699176,0.00033935413,0.00010638797,0.000028547789,0.00057201076,0.0005917954,0.00006610103],"category_scores_gemma":[0.0001873967,0.00032324783,0.00015058188,0.00030408552,0.0005822789,0.00007185969,0.00060373946,0.00057587825,0.000009448924],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035757298,0.00013343545,0.007325308,0.00047616073,0.00017284752,0.000048591864,0.00044221967,0.000081445156,0.9692925,0.00032960062,0.000033245047,0.021307051],"study_design_scores_gemma":[0.0021954104,0.0007307784,0.0009998136,0.00034031444,0.00011391924,0.000008866217,0.0007059402,0.004929219,0.988878,0.0002851026,0.00056630786,0.00024632196],"about_ca_topic_score_codex":0.001465892,"about_ca_topic_score_gemma":0.000022972015,"teacher_disagreement_score":0.06426869,"about_ca_system_score_codex":0.00010961144,"about_ca_system_score_gemma":0.0002667104,"threshold_uncertainty_score":0.999922},"labels":[],"label_agreement":null},{"id":"W2590403118","doi":"10.1007/978-1-4939-6756-8_15","title":"A Simplified and Systematic Method to Isolate, Culture, and Characterize Multiple Types of Human Dental Stem Cells from a Single Tooth","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Dental pulp stem cells; Stem cell; Periodontal ligament stem cells; Mesenchymal stem cell; Periodontal fiber; Tissue engineering; Biomedical engineering; Dental papilla; Pulp (tooth); Cell biology; Dentistry; Odontoblast; Biology; Medicine; Alkaline phosphatase","score_opus":0.07224747622596064,"score_gpt":0.4387169062368769,"score_spread":0.36646943001091625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590403118","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7086868,0.0008436987,0.28887007,0.000046751953,0.0000677772,0.0010578085,0.000022231397,0.000011712958,0.00039309965],"genre_scores_gemma":[0.41677412,0.00001823783,0.58273536,0.000098527584,0.000021082285,0.000049180206,0.0000072749704,0.000021369053,0.00027485882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99725896,0.0014543568,0.00043821518,0.00045301075,0.00011588736,0.0002795445],"domain_scores_gemma":[0.9984682,0.0005108499,0.00020973022,0.0005757138,0.00006886803,0.00016663977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016996652,0.00018291446,0.0008824416,0.00015024346,0.00008538761,0.000039129787,0.00021630124,0.00021702459,0.000016522303],"category_scores_gemma":[0.00067733775,0.00014080266,0.000060127713,0.00007928815,0.00014986601,0.000029236511,0.00035630315,0.00019291455,0.0000029849116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110557325,0.000061685874,0.008096357,0.0014540734,0.00008544058,0.000048699887,0.00038278327,2.6958898e-7,0.9854404,0.0001400946,0.0000018243206,0.0041778577],"study_design_scores_gemma":[0.0013568705,0.0008106767,0.007977103,0.00089171,0.000091166316,0.0000352674,0.00021587838,0.00054527994,0.9873248,0.00045385034,0.00012396059,0.00017348754],"about_ca_topic_score_codex":0.00051004556,"about_ca_topic_score_gemma":0.00005508636,"teacher_disagreement_score":0.2938653,"about_ca_system_score_codex":0.00003685456,"about_ca_system_score_gemma":0.0000197755,"threshold_uncertainty_score":0.5741766},"labels":[],"label_agreement":null},{"id":"W2590999336","doi":"10.1007/978-1-4939-6756-8_17","title":"Echocardiography-Guided Intramyocardial Injection Method in a Murine Model","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Myocardial infarction; Cardiology; Regenerative medicine; Internal medicine; Stem cell","score_opus":0.03801312962501034,"score_gpt":0.4553717231935433,"score_spread":0.41735859356853294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2590999336","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050380368,0.0014509661,0.94529617,0.00075918494,0.00060048455,0.0003279719,0.000002245899,0.000046967092,0.0011356556],"genre_scores_gemma":[0.125891,0.000085435786,0.8733531,0.00012130743,0.00018425871,0.00006855088,0.0000117968775,0.0000285915,0.00025593987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805564,0.0006969863,0.00036325175,0.0004431626,0.00009523737,0.00034574763],"domain_scores_gemma":[0.99900174,0.00008323556,0.00009060244,0.0006762042,0.000051436375,0.0000967751],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022353046,0.00021580381,0.0006911295,0.0005754501,0.00006153517,0.0000117279005,0.00017201161,0.00028301773,0.000008052546],"category_scores_gemma":[0.001181701,0.00017982074,0.00017135135,0.00023959263,0.0001671053,0.000027884189,0.00009023993,0.0005155757,0.000001755384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009869263,0.00008538105,0.021774592,0.00004957389,0.00013495694,0.00024008009,0.00022291456,0.022435918,0.8739359,0.0045701084,0.000058901842,0.07639302],"study_design_scores_gemma":[0.013251299,0.0017429327,0.07942455,0.00044999758,0.00033529272,0.0007979839,0.00012852834,0.3873439,0.48812613,0.021205235,0.0060721156,0.0011220274],"about_ca_topic_score_codex":0.00023244528,"about_ca_topic_score_gemma":0.000010549496,"teacher_disagreement_score":0.38580975,"about_ca_system_score_codex":0.000073718256,"about_ca_system_score_gemma":0.000053905573,"threshold_uncertainty_score":0.7332877},"labels":[],"label_agreement":null},{"id":"W2591041135","doi":"10.1007/978-1-4939-6798-8_12","title":"Binding Specificity Profiles from Computational Peptide Screening","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Peptide; Binding affinities; Sequence (biology); Monte Carlo method; Chemistry; Affinities; Conformational ensembles; Molecular dynamics; Mathematics; Computational chemistry; Stereochemistry; Statistics; Biochemistry","score_opus":0.02752905508834704,"score_gpt":0.38107515355288857,"score_spread":0.35354609846454155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591041135","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29714373,0.00024326645,0.70109373,0.0001018258,0.00016803617,0.00013539301,0.000048123733,0.000009233839,0.0010566252],"genre_scores_gemma":[0.18673612,0.000018458486,0.8124661,0.00016815077,0.00015160744,0.000019734765,0.00033917642,0.000020317853,0.00008032817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984234,0.00041759273,0.00025863957,0.00053221243,0.000071856404,0.0002963127],"domain_scores_gemma":[0.9990177,0.000051273324,0.00019468195,0.00062661915,0.000050625968,0.00005907386],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055972935,0.00019164829,0.00024303733,0.00007180626,0.00019765265,0.000053705833,0.000525563,0.0002969937,0.000025294697],"category_scores_gemma":[0.0005717731,0.00018764408,0.000103994535,0.00004248101,0.00023877854,0.000004609273,0.00039076118,0.0001962368,0.0000043023365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049213388,0.00001469692,0.030023403,0.0000039347465,0.000047662426,0.000016578393,0.000014296343,0.00046149644,0.94753706,0.0018700259,0.000027922924,0.019933732],"study_design_scores_gemma":[0.0011735458,0.00018284087,0.04177921,0.0000341873,0.00002413556,0.000021734742,0.00005182278,0.003514164,0.88863045,0.056629397,0.0073611652,0.00059732073],"about_ca_topic_score_codex":0.00013597553,"about_ca_topic_score_gemma":0.0000395727,"teacher_disagreement_score":0.11137235,"about_ca_system_score_codex":0.000014610624,"about_ca_system_score_gemma":0.000042396594,"threshold_uncertainty_score":0.76519036},"labels":[],"label_agreement":null},{"id":"W2591050590","doi":"10.1007/978-1-4939-6756-8_22","title":"Three-Dimensional Printed Scaffolds with Multipotent Mesenchymal Stromal Cells for Rabbit Mandibular Reconstruction and Engineering","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Mesenchymal stem cell; Tissue engineering; Stromal cell; Scaffold; Adipose tissue; Bone marrow; Biomedical engineering; Transplantation; Cell biology; Biology; Pathology; Medicine; Surgery; Internal medicine","score_opus":0.031658662273205976,"score_gpt":0.37609519959721244,"score_spread":0.3444365373240065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591050590","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50535446,0.00017345154,0.49332786,0.00019878082,0.00013255507,0.00071142946,0.0000038966623,0.000016368887,0.00008120859],"genre_scores_gemma":[0.16800511,0.000010678744,0.83169854,0.000026580907,0.000052015497,0.00010020583,0.000010167974,0.000028397153,0.0000683316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844,0.0001747012,0.0002757845,0.0005199417,0.00014346396,0.00044605506],"domain_scores_gemma":[0.99886894,0.00023630881,0.00011348988,0.0005017038,0.000119600554,0.00015996864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014428803,0.00020485211,0.00044176666,0.00019985203,0.00012690212,0.00002925937,0.00015509923,0.00023956271,0.000034029836],"category_scores_gemma":[0.0005664418,0.00016110919,0.00007410963,0.000066884466,0.0002511747,0.000038337806,0.00017069567,0.00021774213,0.0000018006697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042576116,0.000036993915,0.016870296,0.000100025296,0.00009079351,0.00010584145,0.000012147505,0.00009018388,0.95526224,0.00054778054,0.0000032099933,0.026454704],"study_design_scores_gemma":[0.0045721517,0.0013953135,0.038324725,0.00023756441,0.0000805707,0.000608433,0.000017439766,0.064002,0.8888756,0.0007574505,0.00080402754,0.0003246931],"about_ca_topic_score_codex":0.000109403445,"about_ca_topic_score_gemma":0.000030235473,"teacher_disagreement_score":0.33837068,"about_ca_system_score_codex":0.000065880515,"about_ca_system_score_gemma":0.000070093556,"threshold_uncertainty_score":0.6569842},"labels":[],"label_agreement":null},{"id":"W2591223570","doi":"10.1007/978-1-4939-6756-8_14","title":"Human-Induced Pluripotent Stem Cell-Derived Mesenchymal Stem Cells as an Individual-Specific and Renewable Source of Adult Stem Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Mesenchymal stem cell; Consumables; Induced pluripotent stem cell; Stem cell; Cell biology; Biology; Bone marrow; Flow cytometry; Computational biology; Embryonic stem cell; Immunology; Biotechnology; Chemistry; Genetics; Gene","score_opus":0.04189140190832326,"score_gpt":0.3587189191050877,"score_spread":0.31682751719676444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591223570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9414227,0.0013143824,0.055220924,0.000072028684,0.0003244128,0.00080303376,0.000044702374,0.000024137586,0.00077364896],"genre_scores_gemma":[0.915484,0.00066132087,0.08131786,0.00014571313,0.00010607957,0.00009923464,0.000053852233,0.0001251042,0.002006802],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9936399,0.0025985609,0.00088314485,0.0015298653,0.00036833153,0.0009802011],"domain_scores_gemma":[0.99645704,0.000087315166,0.00065835763,0.0021677262,0.00028683763,0.00034273945],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019213745,0.000571533,0.0008510281,0.00029036397,0.00037591218,0.00013311252,0.0015873244,0.00089279475,0.000020379064],"category_scores_gemma":[0.00003143873,0.00056264724,0.00022783926,0.00015032857,0.00058739336,0.000020510988,0.0013620771,0.00047488784,0.000011010845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013480426,0.00021045755,0.0008385519,0.000106865846,0.000112944326,0.000058167014,0.00022137442,0.00019366265,0.98246425,0.00010760522,0.000056999128,0.015494337],"study_design_scores_gemma":[0.0017699215,0.0012779846,0.00023807779,0.00004442525,0.000039927734,0.00002553269,0.00074994157,0.00016687436,0.9921655,0.00019454719,0.0027602722,0.0005670072],"about_ca_topic_score_codex":0.00056410814,"about_ca_topic_score_gemma":0.0000795128,"teacher_disagreement_score":0.026096933,"about_ca_system_score_codex":0.000056268847,"about_ca_system_score_gemma":0.00015616696,"threshold_uncertainty_score":0.9996825},"labels":[],"label_agreement":null},{"id":"W2591630463","doi":"10.1007/978-1-4939-6771-1_3","title":"Primary Mouse Myoblast Purification using Magnetic Cell Separation","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research","keywords":"Collagenase; Myocyte; Dispase; Fibroblast; Chemistry; Cell; Cell biology; Biomedical engineering; In vitro; Biochemistry; Biology; Engineering","score_opus":0.023330012200078104,"score_gpt":0.39269412448162594,"score_spread":0.36936411228154786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591630463","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5449421,0.00078884466,0.45095423,0.00006562811,0.00015425328,0.0001933342,0.00000563531,0.000008741162,0.0028872264],"genre_scores_gemma":[0.49882132,0.00017597893,0.4996468,0.0005831927,0.00009753599,0.000054074244,0.0001982808,0.000034350567,0.00038844405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982281,0.00066568464,0.00025612445,0.00051158026,0.000044357534,0.00029419528],"domain_scores_gemma":[0.9988157,0.000020564941,0.0001906187,0.0008734319,0.000049104157,0.000050539926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005690114,0.00018219881,0.00021033258,0.00007697551,0.00018425181,0.000027077462,0.00040686186,0.00036226053,0.00002138903],"category_scores_gemma":[0.00023453814,0.00018997854,0.00008845344,0.000045929442,0.00026276096,0.0000064450537,0.00019669124,0.0001429343,0.0000074469062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008979766,0.000068688336,0.0024275493,0.000016044374,0.000010108572,0.0000019927627,0.000017293174,0.00021976173,0.990944,0.0003461015,0.00003022352,0.0058284383],"study_design_scores_gemma":[0.0007523036,0.0003067977,0.006236848,0.00000482878,0.000017101533,0.0000050400163,0.000020200941,0.00064182497,0.9862451,0.0023172789,0.0031751895,0.0002774799],"about_ca_topic_score_codex":0.000051112376,"about_ca_topic_score_gemma":0.00001571764,"teacher_disagreement_score":0.048692588,"about_ca_system_score_codex":0.000019023386,"about_ca_system_score_gemma":0.000069510665,"threshold_uncertainty_score":0.77471},"labels":[],"label_agreement":null},{"id":"W2591667109","doi":"10.1007/978-1-4939-6820-6_6","title":"Isolation of Immune Cells from Adipose Tissue for Flow Cytometry","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Aplastic Anemia and Myelodysplasia Association of Canada","keywords":"Adipose tissue; Immune system; Flow cytometry; Biology; Innate lymphoid cell; White adipose tissue; Brown adipose tissue; Adipose tissue macrophages; Cell biology; Innate immune system; Immunology; Endocrinology","score_opus":0.031414486319850415,"score_gpt":0.429277302395695,"score_spread":0.3978628160758446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591667109","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.063743494,0.0047998573,0.92953366,0.00021454728,0.000597345,0.0004542587,0.000038562004,0.000012996361,0.0006052966],"genre_scores_gemma":[0.103620715,0.000087525186,0.89562845,0.00013533709,0.00012684175,0.000029821345,0.00006633419,0.0000229847,0.00028198573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998759,0.00028173553,0.0003887414,0.00028996196,0.000055318236,0.00022528661],"domain_scores_gemma":[0.99863875,0.00021849714,0.0002464925,0.00075432163,0.00008262186,0.000059298945],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000893833,0.00013764312,0.00058378826,0.00016793355,0.00005429978,0.0000067346896,0.00021612481,0.00027436027,0.00007835062],"category_scores_gemma":[0.0011068896,0.00012424523,0.00012250348,0.00007590617,0.00014205485,0.000031374577,0.00008683066,0.00014611898,0.000007666781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012526022,0.00004811611,0.00078922283,0.000025586352,0.00007586264,0.000011918109,0.00008897728,0.0000030790218,0.8434866,0.00053133065,0.000013757734,0.15480027],"study_design_scores_gemma":[0.0014971492,0.00026683338,0.010152281,0.000036196503,0.00017707254,0.000004784321,0.000013216636,0.0006526024,0.9680169,0.006276691,0.012792212,0.00011406631],"about_ca_topic_score_codex":0.00023423407,"about_ca_topic_score_gemma":0.0000058649225,"teacher_disagreement_score":0.1546862,"about_ca_system_score_codex":0.000016317797,"about_ca_system_score_gemma":0.00004110038,"threshold_uncertainty_score":0.50665736},"labels":[],"label_agreement":null},{"id":"W2591846070","doi":"10.1007/978-1-4939-6857-2_19","title":"Incorporating Aptamers in the Multiple Analyte Profiling Assays (xMAP): Detection of C-Reactive Protein","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Health Canada","funders":"","keywords":"Aptamer; Analyte; Immunoassay; Computational biology; Chemistry; Oligonucleotide; Antibody; Specific antibody; Nanotechnology; Molecular biology; Chromatography; Biology; Materials science; Immunology; Biochemistry; DNA","score_opus":0.02429991779919243,"score_gpt":0.3938917659356158,"score_spread":0.3695918481364234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591846070","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6010155,0.00007876914,0.39817977,0.000075422875,0.00003237065,0.0003272772,0.000004868609,0.00000791988,0.00027808239],"genre_scores_gemma":[0.6470376,0.000007203199,0.35281226,0.000045130742,0.000024624132,0.000039713952,0.000017881848,0.000009815185,0.000005752121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976488,0.0011970786,0.00038227718,0.00044189306,0.000089016095,0.00024094197],"domain_scores_gemma":[0.99861544,0.00006217561,0.00047635677,0.0007269623,0.00009637314,0.000022677204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002494639,0.00018067339,0.0002985065,0.00015202687,0.00011389942,0.000019771604,0.0004295551,0.00030907986,2.0718426e-7],"category_scores_gemma":[0.00208739,0.00013614041,0.00012947641,0.00017855225,0.0003400346,0.0000063026687,0.00016385912,0.0002852872,1.7569849e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073066316,0.00004639529,0.010458513,0.000009252335,0.00003108989,0.000007691287,0.000022988195,0.000013105137,0.9717533,0.00017328035,3.0232542e-7,0.017411018],"study_design_scores_gemma":[0.00036220116,0.00021427922,0.0012139933,0.000023195036,0.000015969928,0.000006719685,0.00016880725,0.0007592878,0.9945853,0.0023913062,0.0001006723,0.00015827786],"about_ca_topic_score_codex":0.00022093779,"about_ca_topic_score_gemma":0.0003542186,"teacher_disagreement_score":0.046022106,"about_ca_system_score_codex":0.000024339608,"about_ca_system_score_gemma":0.000038594822,"threshold_uncertainty_score":0.55516446},"labels":[],"label_agreement":null},{"id":"W2591928899","doi":"10.1007/978-1-4939-6771-1_9","title":"Fibro/Adipogenic Progenitors (FAPs): Isolation by FACS and Culture","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":33,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Johns Hopkins University","keywords":"Cell sorting; Mesenchymal stem cell; Progenitor cell; Context (archaeology); Isolation (microbiology); Adipogenesis; Cell biology; Biology; Stromal cell; Cell; Computational biology; Stem cell; Bioinformatics; Cancer research; Genetics","score_opus":0.03897190214776836,"score_gpt":0.4731046714664393,"score_spread":0.43413276931867095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2591928899","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5113862,0.0076349913,0.47084403,0.0017052109,0.00027846874,0.0012545818,0.00001291907,0.00004521103,0.006838371],"genre_scores_gemma":[0.19249135,0.00029328326,0.8038936,0.0002235455,0.00009411616,0.000076557866,0.000054496253,0.000035593366,0.0028374083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99821585,0.0006918682,0.00022741707,0.00040667702,0.000115918054,0.0003422527],"domain_scores_gemma":[0.99906784,0.00008916317,0.0000995867,0.00053862546,0.00006595267,0.0001388072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011462179,0.00015181008,0.0003218049,0.000096496755,0.00013118678,0.000034073557,0.000202579,0.00033055717,0.000057517547],"category_scores_gemma":[0.0014407197,0.000120891236,0.00006445547,0.00008580972,0.00024923502,0.00003613159,0.00018170365,0.0003334791,0.00001032825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006223602,0.000027448357,0.044176046,0.00004392712,0.000039045408,0.000034819917,0.00009168242,2.3017405e-7,0.9188562,0.0002561125,0.00020081474,0.036211424],"study_design_scores_gemma":[0.001780742,0.0008153799,0.0122102145,0.000058412516,0.000059974376,0.00012826927,0.00005155145,0.00073791697,0.9325833,0.0046787565,0.046609174,0.00028635302],"about_ca_topic_score_codex":0.00008863213,"about_ca_topic_score_gemma":0.0000068631466,"teacher_disagreement_score":0.33304963,"about_ca_system_score_codex":0.000046952227,"about_ca_system_score_gemma":0.0000467727,"threshold_uncertainty_score":0.49298015},"labels":[],"label_agreement":null},{"id":"W2593246114","doi":"10.1007/978-1-4939-6771-1_18","title":"Optimization of Satellite Cell Culture Through Biomaterials","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Medical University of South Carolina","keywords":"Self-healing hydrogels; Materials science; PEG ratio; Biomaterial; Tissue engineering; Polyethylene glycol; Biomedical engineering; Protein adsorption; Polymer; Biophysics; Nanotechnology; Chemistry; Composite material; Polymer chemistry; Biochemistry; Engineering","score_opus":0.02077591778056954,"score_gpt":0.3946338711258768,"score_spread":0.37385795334530725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2593246114","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13412274,0.0027829027,0.8547991,0.00008884648,0.0003577958,0.00021760067,0.00001765798,0.000008863056,0.0076044956],"genre_scores_gemma":[0.27127907,0.0012687511,0.72686803,0.0002513938,0.000048609687,0.000023839499,0.00015046855,0.000019324087,0.000090521346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846226,0.0006017242,0.00028754995,0.00038442292,0.000033661414,0.0002303836],"domain_scores_gemma":[0.9989168,0.000015700993,0.0002652966,0.0007176298,0.00005634447,0.00002823687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004502566,0.00016369513,0.0002785483,0.000038369406,0.00008531697,0.0000123409745,0.0004177298,0.00040387016,0.00003179624],"category_scores_gemma":[0.00032635592,0.0001472853,0.00010008957,0.00004395588,0.00032794874,0.0000049723844,0.00021185349,0.000051456038,0.0000020729826],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010963956,0.00005833195,0.0013842706,0.00002604885,0.00002493252,0.0000018884787,0.000052031166,0.00051287934,0.9949566,0.0008660767,0.000024522411,0.0019827783],"study_design_scores_gemma":[0.00058702735,0.00024747784,0.0006936307,0.000007808902,0.000012223296,0.0000020889952,0.000029615036,0.00004841668,0.9883209,0.004681417,0.005202168,0.00016723805],"about_ca_topic_score_codex":0.00004656083,"about_ca_topic_score_gemma":0.0000057657803,"teacher_disagreement_score":0.13715632,"about_ca_system_score_codex":0.0000046085215,"about_ca_system_score_gemma":0.000030583546,"threshold_uncertainty_score":0.60061204},"labels":[],"label_agreement":null},{"id":"W2594001054","doi":"10.1007/978-1-4939-6881-7_16","title":"Studying Dynamic Plasma Membrane Binding of TCR-CD3 Chains During Immunological Synapse Formation Using Donor-Quenching FRET and FLIM-FRET","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"Canadian Institutes of Health Research","keywords":"Förster resonance energy transfer; Immunological synapse; T-cell receptor; Biophysics; Cytoplasm; Cell biology; Fluorescence-lifetime imaging microscopy; Chemistry; Membrane; CD3; Receptor; T cell; Biology; Fluorescence; Immune system; CD8; Biochemistry; Immunology","score_opus":0.0299304679573476,"score_gpt":0.3401168360713832,"score_spread":0.3101863681140356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594001054","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9373275,0.0029821354,0.058303483,0.000104123705,0.0006770902,0.00038401378,0.000020170808,0.00005635864,0.00014510572],"genre_scores_gemma":[0.93453586,0.00047535484,0.06473713,0.000026094714,0.000012314161,0.000036945454,0.000056799894,0.000030794123,0.0000886763],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956342,0.002065444,0.0008296503,0.00065437297,0.00003858072,0.00077776896],"domain_scores_gemma":[0.9980309,0.0003763899,0.0006912645,0.0008067188,0.000064572785,0.000030132212],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016952076,0.00040360406,0.00092937244,0.00050619524,0.00078317116,0.000040408766,0.00072703144,0.0009256003,0.00006569659],"category_scores_gemma":[0.00064466416,0.00036518826,0.00015559566,0.00014725949,0.0011245491,0.0001959671,0.00083738734,0.0008667892,0.000010836074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018934508,0.000094992385,0.0038340308,0.00007696841,0.0002362743,0.000046521895,0.0005717459,0.0000439847,0.98885393,0.0011884712,3.6279758e-7,0.004863365],"study_design_scores_gemma":[0.0025639115,0.00028626362,0.0018407735,0.00011843737,0.000079786834,0.00046858517,0.00056005974,0.00072568277,0.9918879,0.0010098005,0.00006414932,0.00039462908],"about_ca_topic_score_codex":0.00032251095,"about_ca_topic_score_gemma":0.00005984629,"teacher_disagreement_score":0.006433649,"about_ca_system_score_codex":0.0001238311,"about_ca_system_score_gemma":0.000042671716,"threshold_uncertainty_score":0.99988},"labels":[],"label_agreement":null},{"id":"W2594342882","doi":"10.1007/978-1-4939-6848-0_19","title":"Resonance Energy Transfer-Based Nucleic Acid Hybridization Assays on Paper-Based Platforms Using Emissive Nanoparticles as Donors","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research Canada; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Ontario Centres of Excellence","keywords":"Nanomaterials; Nanotechnology; Biosensor; Photoluminescence; Nanoparticle; Acceptor; Quantum dot; Materials science; Förster resonance energy transfer; Nucleic acid; Nucleic acid detection; Chemistry; Fluorescence; Optoelectronics; Biochemistry","score_opus":0.023946071323599792,"score_gpt":0.32910059189426705,"score_spread":0.3051545205706673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594342882","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38146812,0.00014418758,0.61772573,0.00006928277,0.00015232054,0.00005997783,0.000005315156,0.000061099316,0.00031396397],"genre_scores_gemma":[0.88609296,0.000029901656,0.11344343,0.000334906,0.000032898457,0.000013530028,0.00000792612,0.000037359514,0.0000071133645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988204,0.00018185681,0.00027117235,0.00031571643,0.00008231689,0.0003285033],"domain_scores_gemma":[0.9993431,0.000095288924,0.000042662406,0.0004110212,0.000030939926,0.00007698493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003918601,0.00020582463,0.0002631945,0.00013036483,0.00015075837,0.00004326151,0.00020336726,0.0002481288,0.000029981818],"category_scores_gemma":[0.00029937288,0.00018717439,0.00010453583,0.00012849864,0.00012727364,0.000058647394,0.000015310377,0.00019146122,0.0000039573483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004619332,0.000025442283,0.00015308586,0.000014644498,0.000012215113,0.000025748855,0.000007655382,0.02224223,0.9393879,0.0037841506,0.0000014164802,0.034299295],"study_design_scores_gemma":[0.0004048023,0.000112366506,0.00020759703,0.00003820371,0.000013007902,0.000002155147,0.000003862563,0.26761293,0.72764665,0.0031588085,0.0006257782,0.00017386768],"about_ca_topic_score_codex":0.00009332641,"about_ca_topic_score_gemma":0.000029399791,"teacher_disagreement_score":0.50462484,"about_ca_system_score_codex":0.000085468135,"about_ca_system_score_gemma":0.000027311971,"threshold_uncertainty_score":0.76327497},"labels":[],"label_agreement":null},{"id":"W2594905547","doi":"10.1007/978-1-4939-6857-2_10","title":"Antibody Validation by Immunoprecipitation Followed by Mass Spectrometry Analysis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Wellcome Trust","keywords":"Immunoprecipitation; Antibody; Mass spectrometry; Chemistry; Computational biology; Antigen; RNA; Molecular biology; Antibody microarray; Biology; Biochemistry; Chromatography; Gene; Immunology","score_opus":0.013700401556982666,"score_gpt":0.42771365420194896,"score_spread":0.4140132526449663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2594905547","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044974323,0.00028562304,0.95106673,0.00018719668,0.000026623693,0.000113405586,0.00006238076,0.000052997228,0.0032307112],"genre_scores_gemma":[0.0880612,0.00013261974,0.91023225,0.000036083176,0.000012293085,0.000119293625,0.0011215516,0.000018337063,0.00026639292],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885476,0.00015660608,0.00029303133,0.00041205803,0.000058910962,0.00022466047],"domain_scores_gemma":[0.9986596,0.00009163276,0.00030618985,0.0008695226,0.000038568618,0.000034468096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005629407,0.00014847389,0.0002908864,0.00012872643,0.00015383662,0.00004714806,0.00047038597,0.00023963189,0.00013761778],"category_scores_gemma":[0.0002991866,0.00015799879,0.00013504908,0.00023404448,0.00009740505,0.000057241356,0.00008622752,0.000211219,0.000003168882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008246163,0.000031155105,0.0071423617,0.0000049962514,0.00010029098,9.714075e-7,0.000009828559,0.000010424786,0.98874956,0.0013100598,0.000027269112,0.0026048347],"study_design_scores_gemma":[0.00020293653,0.000016347562,0.000117546064,0.0000038140677,0.00008514285,5.6550067e-7,0.000011637166,0.0004512667,0.96897143,0.027935566,0.0020344092,0.00016935145],"about_ca_topic_score_codex":0.00008322143,"about_ca_topic_score_gemma":0.000001210162,"teacher_disagreement_score":0.04308688,"about_ca_system_score_codex":0.00006941643,"about_ca_system_score_gemma":0.000009990931,"threshold_uncertainty_score":0.6443004},"labels":[],"label_agreement":null},{"id":"W2596872785","doi":"10.1007/978-1-4939-6850-3_4","title":"Profiling of Protein N-Termini and Their Modifications in Complex Samples","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"European Commission; Michael Smith Health Research BC","keywords":"Proteome; Computational biology; Protease; Chemistry; Proteolysis; Isotopic labeling; Biology; Biochemistry; Enzyme","score_opus":0.05972931710848277,"score_gpt":0.3934794414999871,"score_spread":0.3337501243915043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2596872785","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8325387,0.00018296424,0.16676122,0.00014328651,0.000020783626,0.00020204585,0.000022929498,0.0000025606575,0.00012548329],"genre_scores_gemma":[0.7273223,0.00002265057,0.27245638,0.000034333618,0.000015217306,0.000028863324,0.00010634456,0.00000625743,0.000007680437],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990828,0.00023548074,0.00023562589,0.0002816731,0.000020060184,0.00014436938],"domain_scores_gemma":[0.9994284,0.000015011449,0.00013807196,0.0003592062,0.000033129934,0.000026205547],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029449083,0.00010975345,0.00019233502,0.0000500086,0.000043643868,0.000011181922,0.00022097748,0.00017981579,0.00000296834],"category_scores_gemma":[0.00040380756,0.00009021746,0.000034925502,0.000038275844,0.00023955363,0.0000028927025,0.00016271231,0.00008190464,1.1095878e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025218837,0.000015581109,0.008480752,0.000020137872,0.000006971732,6.1669016e-7,0.000021206044,0.0000012730928,0.9776641,0.0018668199,3.8711525e-7,0.011896937],"study_design_scores_gemma":[0.00025315845,0.00006167997,0.02904094,0.000011142194,0.0000018060784,0.0000041526623,0.000018849487,0.00018527183,0.96468896,0.0053909686,0.0002421478,0.00010091659],"about_ca_topic_score_codex":0.00003073652,"about_ca_topic_score_gemma":0.000012749115,"teacher_disagreement_score":0.105695166,"about_ca_system_score_codex":0.000004976772,"about_ca_system_score_gemma":0.000017644197,"threshold_uncertainty_score":0.36789614},"labels":[],"label_agreement":null},{"id":"W2597706633","doi":"10.1007/978-1-4939-6817-6_17","title":"Systemic Delivery of Morpholinos to Skip Multiple Exons in a Dog Model of Duchenne Muscular Dystrophy","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; Morpholino; Duchenne muscular dystrophy; Exon; RNA splicing; Muscular dystrophy; Medicine; Bioinformatics; Biology; Genetics; Alternative splicing; Internal medicine; RNA; Gene knockdown; Gene","score_opus":0.025347988764334736,"score_gpt":0.3673860505509858,"score_spread":0.342038061786651,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2597706633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72064996,0.0005450848,0.27819905,0.00003798635,0.00009025683,0.0002970462,0.000033141718,0.000003494231,0.00014400925],"genre_scores_gemma":[0.7956925,0.00009479387,0.20395246,0.00010909525,0.000017338292,0.00007076138,0.000030279341,0.000019545885,0.000013248531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977442,0.0006816544,0.00056254794,0.00057187385,0.000065035674,0.00037468254],"domain_scores_gemma":[0.99832606,0.000062477404,0.00028739634,0.0011380819,0.00011008658,0.00007591323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008406731,0.0002314517,0.000571998,0.00021262019,0.00004931754,0.000005013948,0.000675308,0.0004324952,0.0000055442138],"category_scores_gemma":[0.0010663562,0.00023175882,0.00019588383,0.00010313705,0.00032545577,0.0000048208603,0.00041930878,0.00017327616,0.0000015310703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026745137,0.00013662345,0.013776532,0.00007073224,0.0000548013,0.0000073497877,0.000073718475,0.011768085,0.97154135,0.00049919,0.000007761989,0.0017964209],"study_design_scores_gemma":[0.0019639805,0.00047577656,0.007929462,0.0000771067,0.000027751645,0.0000083455625,0.000090505404,0.0057194093,0.9805511,0.0027273938,0.00008665694,0.00034251565],"about_ca_topic_score_codex":0.0004598792,"about_ca_topic_score_gemma":0.00010906532,"teacher_disagreement_score":0.075042546,"about_ca_system_score_codex":0.000017019993,"about_ca_system_score_gemma":0.000101270896,"threshold_uncertainty_score":0.94508505},"labels":[],"label_agreement":null},{"id":"W2600990022","doi":"10.1007/978-1-4939-6340-9_1","title":"Genetic Approaches to Study Meiosis and Meiosis-Specific Gene Expression in Saccharomyces cerevisiae","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Meiosis; Biology; Saccharomyces cerevisiae; Genetic recombination; Genetics; Homologous recombination; Chromosome segregation; Gene; Ploidy; Chromosome; Recombination","score_opus":0.11478832864450081,"score_gpt":0.4047791681976702,"score_spread":0.2899908395531694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2600990022","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9071248,0.0048833205,0.086548455,0.00026619036,0.00011436574,0.0007414536,0.000009759464,0.000006406529,0.00030525491],"genre_scores_gemma":[0.6360089,0.00045508143,0.3631659,0.0000690952,0.00006461166,0.00016839824,0.000008507972,0.000027666882,0.000031821568],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965464,0.0013570767,0.00040329542,0.0010325743,0.00013672019,0.000523972],"domain_scores_gemma":[0.99849737,0.00004969958,0.00010763293,0.0011394895,0.000039788087,0.00016604073],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013830945,0.00029390436,0.00041409745,0.0002309832,0.00016361897,0.00008440745,0.0007832172,0.00028820682,0.000018456702],"category_scores_gemma":[0.00038161018,0.00026444235,0.00007477765,0.00013918006,0.00017370512,0.0000045489796,0.0011594258,0.00023149698,0.0000054483576],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009462347,0.0001800599,0.103694096,0.000013135484,0.00002751254,0.000028810799,0.00015031108,0.000046036523,0.8589427,0.00003894663,0.000011931547,0.036771826],"study_design_scores_gemma":[0.00093398825,0.00059808005,0.12047754,0.00001982813,0.000008730813,0.000012950065,0.00013600221,0.00004980472,0.87526333,0.0007446956,0.001438385,0.00031665378],"about_ca_topic_score_codex":0.000067312634,"about_ca_topic_score_gemma":0.000094638104,"teacher_disagreement_score":0.27661744,"about_ca_system_score_codex":0.0000234138,"about_ca_system_score_gemma":0.0000339681,"threshold_uncertainty_score":0.9999808},"labels":[],"label_agreement":null},{"id":"W2601627890","doi":"10.1007/978-1-4939-6340-9_5","title":"Selection of G1 Phase Yeast Cells for Synchronous Meiosis and Sporulation","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Meiosis; Biology; Cell cycle; Meiosis II; Elutriation; Cell biology; Population; Gametogenesis; Spore; Cell; Cell division; Saccharomyces cerevisiae; Genetics; Yeast; Chemistry; Microbiology; Gene; Embryo; Embryogenesis","score_opus":0.027869673143796597,"score_gpt":0.4395378798680098,"score_spread":0.4116682067242132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2601627890","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47973853,0.00033379762,0.5192052,0.000048342754,0.00010190463,0.00025727515,0.00002891085,0.000002654069,0.00028336456],"genre_scores_gemma":[0.66966903,0.00011887571,0.3299214,0.000026630782,0.000055544686,0.000039650397,0.00003697725,0.000014565169,0.00011732428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989984,0.00022201511,0.00019647881,0.00032533891,0.000044754066,0.00021301942],"domain_scores_gemma":[0.99940586,0.000026464124,0.00012259794,0.00030527374,0.00009226119,0.000047520658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067600823,0.000110420435,0.00018585417,0.00006569511,0.00010339013,0.000019116205,0.00018355538,0.00020296917,0.000007220139],"category_scores_gemma":[0.00032273354,0.0001073767,0.000064249114,0.00003925567,0.00017017483,0.0000023598623,0.00013404571,0.000069408554,4.34476e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014952348,0.00006392143,0.0016142543,0.000032403917,0.000028657998,7.3841977e-7,0.000009009026,0.000025376268,0.9583434,0.0001809525,0.00002399257,0.039527796],"study_design_scores_gemma":[0.0010674288,0.0006620196,0.00075589924,0.000007876041,0.00001333977,0.000005090543,0.000008793494,0.0014858112,0.9931975,0.0006082559,0.002076203,0.00011176654],"about_ca_topic_score_codex":0.00004809202,"about_ca_topic_score_gemma":0.000018512512,"teacher_disagreement_score":0.18993048,"about_ca_system_score_codex":0.000009156884,"about_ca_system_score_gemma":0.000040956304,"threshold_uncertainty_score":0.4378695},"labels":[],"label_agreement":null},{"id":"W26019186","doi":"10.1007/978-1-4939-2428-8_24","title":"Evidence-Based Decision-Making 2: Systematic Reviews and Meta-analysis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Calgary; University of Alberta","funders":"","keywords":"Systematic review; Management science; Computer science; Meta-analysis; Clinical trial; Reading (process); Data science; Clinical study design; Evidence-based medicine; MEDLINE; Alternative medicine; Psychology; Medicine; Risk analysis (engineering); Engineering; Political science; Pathology","score_opus":0.8830284241396682,"score_gpt":0.6546418547594993,"score_spread":0.22838656938016888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W26019186","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005739919,0.12634861,0.87031645,0.0005041927,0.00012971675,0.0016984055,0.000004099155,0.00000547887,0.00041906317],"genre_scores_gemma":[0.025936263,0.00010331411,0.97140414,0.0017501856,0.000013962173,0.00044599592,0.000001915865,0.000014617722,0.00032963135],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.79833513,0.18293747,0.014050869,0.0019202995,0.0023263583,0.00042984128],"domain_scores_gemma":[0.9213739,0.06325089,0.0070155975,0.006811308,0.0012390508,0.0003092741],"candidate_categories":["metaresearch","metaepi_broad","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.48765758,0.00052717683,0.016364262,0.0018609344,0.00006847745,0.0004694696,0.0021589184,0.00024496287,0.0025441796],"category_scores_gemma":[0.49033913,0.00022708833,0.006414237,0.005507926,0.00014632962,0.00015117976,0.0003292348,0.0002444174,0.00040915923],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029716565,0.0008820561,0.0701191,0.018389128,0.4996975,0.0007410631,0.004629836,0.028780436,0.016285926,0.06950786,0.016079035,0.2745909],"study_design_scores_gemma":[0.00053803704,0.0002794674,0.00041827792,0.00096186687,0.62510145,0.000059433238,0.00059850496,0.09486862,0.00048411294,0.25845075,0.016869871,0.0013696396],"about_ca_topic_score_codex":0.000015348389,"about_ca_topic_score_gemma":0.000038728107,"teacher_disagreement_score":0.27322125,"about_ca_system_score_codex":0.0000598862,"about_ca_system_score_gemma":0.00008851056,"threshold_uncertainty_score":0.9983676},"labels":[],"label_agreement":null},{"id":"W2603682730","doi":"10.1007/978-1-4939-6810-7_1","title":"Introduction to Modern Methods in Light Microscopy","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"","keywords":"Microscopy; Optical microscope; Nanotechnology; Resolution (logic); Key (lock); Computer science; Optics; Materials science; Physics; Artificial intelligence","score_opus":0.04810681158246201,"score_gpt":0.530163421525233,"score_spread":0.482056609942771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2603682730","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000013840341,0.48590565,0.512593,0.00008984748,0.0004243144,0.00080216443,0.000016098698,0.000022769214,0.00014478735],"genre_scores_gemma":[4.0711797e-8,0.46715453,0.5315693,0.00010672086,0.00028253297,0.00040705228,0.00015416468,0.000093909795,0.00023171859],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99139106,0.004315903,0.0012068435,0.002100018,0.00008626025,0.00089988613],"domain_scores_gemma":[0.9966505,0.00008709602,0.0005624613,0.0024606169,0.00009299566,0.00014628563],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0034926638,0.0008777174,0.0023395312,0.0007884804,0.00008374436,0.00005085238,0.0015213247,0.0018424456,0.000016498074],"category_scores_gemma":[0.0022732494,0.00084110344,0.00049353566,0.00043612314,0.00025126355,0.0000072254034,0.0010039062,0.00094637467,0.000016039292],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001768428,0.000034650006,0.0000046391488,0.0003632343,0.000032269323,0.000011847508,0.000012135529,0.0000031603333,0.4979878,0.00007628646,0.00016403796,0.5012922],"study_design_scores_gemma":[0.00012362014,0.00017958503,5.820852e-7,0.0006256524,0.00005116305,0.000038974784,0.000002403121,0.0000040058408,0.32912433,0.0011870163,0.6681176,0.00054511934],"about_ca_topic_score_codex":0.000029929308,"about_ca_topic_score_gemma":0.000030628587,"teacher_disagreement_score":0.6679535,"about_ca_system_score_codex":0.00022314634,"about_ca_system_score_gemma":0.00028240934,"threshold_uncertainty_score":0.99945337},"labels":[],"label_agreement":null},{"id":"W2604559641","doi":"10.1007/978-1-4939-6869-5_3","title":"Fowl Adenovirus-Based Vaccine Platform","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cosmid; Virology; Biology; Restriction enzyme; Homologous recombination; Insert (composites); Genome; clone (Java method); DNA; Plasmid; Gene; Transfection; DNA vaccination; Vector (molecular biology); Molecular biology; Genetics; Recombinant DNA","score_opus":0.047092210822041604,"score_gpt":0.44580036929159556,"score_spread":0.39870815846955393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2604559641","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.524171,0.0021432997,0.46894997,0.0008705747,0.00038340184,0.0005225615,0.000025122225,0.000030280342,0.0029037972],"genre_scores_gemma":[0.5035697,0.00022766474,0.49273762,0.0021160159,0.00031521713,0.00020594215,0.00017943971,0.00012497998,0.00052336487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973266,0.0007080917,0.00037688276,0.0007685676,0.00013251202,0.0006873472],"domain_scores_gemma":[0.99761385,0.0000642396,0.00019287108,0.0018874753,0.000100105164,0.00014148095],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020101971,0.00031098272,0.00038331345,0.00019678294,0.00023430242,0.00005946816,0.0012448516,0.00048070625,0.000119182936],"category_scores_gemma":[0.0010426611,0.000296781,0.00018888043,0.00011065791,0.00025114705,0.0000054450848,0.00042940382,0.00033649406,0.00002730642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001291016,0.000076826625,0.004607367,0.000011974968,0.000058705522,0.00003227901,0.000008233436,0.000083873165,0.9499376,0.0003183804,0.00010483831,0.04346895],"study_design_scores_gemma":[0.0019910468,0.0021312644,0.0012753486,0.000011776718,0.000011472881,0.000009630902,0.0000084549365,0.00034114142,0.9749,0.0025147311,0.016451431,0.0003536877],"about_ca_topic_score_codex":0.0000657766,"about_ca_topic_score_gemma":0.00031641574,"teacher_disagreement_score":0.043115262,"about_ca_system_score_codex":0.000040547788,"about_ca_system_score_gemma":0.00018545245,"threshold_uncertainty_score":0.99994844},"labels":[],"label_agreement":null},{"id":"W2605521759","doi":"10.1007/978-1-4939-6899-2_2","title":"Quantitative Kinetic Characterization of Glycoside Hydrolases Using High-Performance Anion-Exchange Chromatography (HPAEC)","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"British Columbia Knowledge Development Fund; Natural Sciences and Engineering Research Council of Canada","keywords":"Glycoside hydrolase; Chemistry; Glycosyl; Hydrolysis; Chromatography; Kinetics; Substrate (aquarium); Hydrolase; Ion exchange; Ion chromatography; Glycoside; Enzyme; Combinatorial chemistry; Biochemistry; Stereochemistry; Organic chemistry; Ion; Biology","score_opus":0.028767451857137083,"score_gpt":0.3679574202334618,"score_spread":0.3391899683763247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605521759","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7008819,0.0001596571,0.29839134,0.00005598563,0.00028573503,0.00015122307,0.000017039238,0.000007707869,0.00004939503],"genre_scores_gemma":[0.8303493,0.0003958758,0.16875231,0.000098648765,0.000076404605,0.000022726295,0.00025749352,0.000024616505,0.000022581578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985067,0.00044475225,0.00034434316,0.00041593838,0.00006590208,0.00022235491],"domain_scores_gemma":[0.9988206,0.000013064912,0.0004248594,0.0005912716,0.00011189324,0.000038296326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049134943,0.00018115656,0.00026933773,0.00017225873,0.00011943361,0.000020612248,0.00027691334,0.00021299317,0.000019099478],"category_scores_gemma":[0.00027940032,0.00018459103,0.00006988257,0.00013399887,0.00024128491,0.000015435062,0.00014878674,0.00009401103,0.0000014035941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008648492,0.000055915305,0.012151657,0.000048150894,0.000033675966,0.000001454284,0.00003477964,0.000047106347,0.9827611,0.0004044709,0.0000012890708,0.0043739052],"study_design_scores_gemma":[0.0004046117,0.00031445065,0.05099404,0.000033307366,0.000018026687,0.00001018774,0.000010256513,0.0009706422,0.94629043,0.00013664893,0.0006318464,0.00018556202],"about_ca_topic_score_codex":0.00005466734,"about_ca_topic_score_gemma":0.0000060200077,"teacher_disagreement_score":0.12963903,"about_ca_system_score_codex":0.00001155067,"about_ca_system_score_gemma":0.000031761374,"threshold_uncertainty_score":0.7527404},"labels":[],"label_agreement":null},{"id":"W2605649012","doi":"10.1007/978-1-4939-6899-2_1","title":"A Low-Volume, Parallel Copper-Bicinchoninic Acid (BCA) Assay for Glycoside Hydrolases","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"British Columbia Knowledge Development Fund; Natural Sciences and Engineering Research Council of Canada","keywords":"Bicinchoninic acid assay; Glycoside hydrolase; Chemistry; Chromatography; Copper; Glycoside; Biochemistry; Polysaccharide; Hydrolase; Enzyme; Stereochemistry; Organic chemistry","score_opus":0.023537569644285508,"score_gpt":0.38230028667756716,"score_spread":0.35876271703328166,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605649012","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11105085,0.0006586466,0.8852309,0.0010267446,0.00065102323,0.00043794478,0.000028706996,0.000022361715,0.0008928228],"genre_scores_gemma":[0.4309018,0.00037049106,0.5644434,0.0010035171,0.00041608876,0.0003444538,0.00049245975,0.00006761919,0.001960146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978862,0.000615765,0.0003534797,0.0006896132,0.000060063896,0.00039491817],"domain_scores_gemma":[0.99856013,0.00003458921,0.00026318285,0.00095733796,0.00010525182,0.00007953149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011466255,0.00023839464,0.0003154789,0.0000867207,0.00021568514,0.00005295893,0.00048602265,0.00038335708,0.000033163727],"category_scores_gemma":[0.001992942,0.00023814065,0.00016353003,0.000056277586,0.00021568057,0.000008315841,0.00020814847,0.00015143432,0.0000094981215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015485595,0.00007598364,0.0031404314,0.000021157703,0.000044265606,0.0000025922445,0.0000140953925,0.00003876271,0.98202235,0.00052264915,0.00050235406,0.013460503],"study_design_scores_gemma":[0.0010189291,0.00040403835,0.0015158134,0.000014135856,0.000020232887,0.000013453865,0.000012572589,0.00032418943,0.93258727,0.0013217591,0.062483907,0.00028370586],"about_ca_topic_score_codex":0.000013592332,"about_ca_topic_score_gemma":0.000023572205,"teacher_disagreement_score":0.32078746,"about_ca_system_score_codex":0.00002084091,"about_ca_system_score_gemma":0.000067900815,"threshold_uncertainty_score":0.9711094},"labels":[],"label_agreement":null},{"id":"W2605745699","doi":"10.1007/978-1-4939-6828-2_23","title":"Appendix C: Automated Vitrification of Mammalian Embryos on a Digital Microfluidic Device","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrowetting and Microfluidic Technologies","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of New Brunswick","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vitrification; Microfluidics; Cryoprotectant; Embryo; Materials science; Nanotechnology; Biomedical engineering; Computer science; Cryopreservation; Biology; Cell biology; Engineering; Andrology","score_opus":0.017001661340115146,"score_gpt":0.3432915070798858,"score_spread":0.32628984573977066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605745699","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.500474,0.004367486,0.49233052,0.00015632524,0.0002127128,0.00020254518,0.000018832443,0.00083974004,0.0013978715],"genre_scores_gemma":[0.8506656,0.0002418971,0.14893307,0.00003247161,0.000010663592,0.000025529645,0.000030638774,0.00003170405,0.000028388089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990551,0.0001220818,0.00027190676,0.00023236407,0.000038698105,0.00027983432],"domain_scores_gemma":[0.9991426,0.00007181673,0.00008072286,0.0006582812,0.000024040954,0.000022562686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044625992,0.00015542668,0.00025957805,0.00020898586,0.000052569776,0.000028471357,0.00048291165,0.0002600312,0.000004976102],"category_scores_gemma":[0.0005402617,0.00015306161,0.000059303886,0.000111519774,0.00014617073,0.0000383747,0.00006522858,0.00021482202,0.000023600769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007476538,0.000017082602,0.0004738558,0.000027039081,0.000022530108,0.000008080128,0.000026012438,0.000013307694,0.9180183,0.0009724635,0.00019203752,0.08022182],"study_design_scores_gemma":[0.00023997478,0.00008252852,0.00060715195,0.0000313072,0.0000073752094,0.000009724102,0.000021437978,0.00043255152,0.9933335,0.0011505939,0.00393726,0.00014658584],"about_ca_topic_score_codex":0.000030491752,"about_ca_topic_score_gemma":0.0000010274363,"teacher_disagreement_score":0.35019165,"about_ca_system_score_codex":0.000043378623,"about_ca_system_score_gemma":0.00001439735,"threshold_uncertainty_score":0.62416714},"labels":[],"label_agreement":null},{"id":"W2605921520","doi":"10.1007/978-1-4939-6899-2_22","title":"Isolation and Preparation of Extracellular Proteins from Lignocellulose Degrading Fungi for Comparative Proteomic Studies Using Mass Spectrometry","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Agriculture and Agri-Food Canada","funders":"","keywords":"Proteomics; Mass spectrometry; Proteome; Organism; Biology; Biochemistry; Isolation (microbiology); Chemistry; Computational biology; Chromatography; Microbiology","score_opus":0.13664260392149205,"score_gpt":0.44288643329851446,"score_spread":0.30624382937702244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2605921520","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6863425,0.0007487261,0.31236798,0.00006404574,0.00003205568,0.00040855905,0.000012856312,0.000005029422,0.000018273706],"genre_scores_gemma":[0.5408269,0.000024330398,0.45906377,0.000007757666,0.00002024276,0.000023385126,0.000018593635,5.5609866e-7,0.000014451574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99876297,0.00051442604,0.0002739294,0.00027805907,0.000043761665,0.00012686443],"domain_scores_gemma":[0.99928135,0.0002445905,0.00030627806,0.00008062005,0.00006392698,0.00002326655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006233007,0.00010605573,0.0003176026,0.00003632757,0.00019092344,0.000028491626,0.00011432869,0.00009271784,0.000014537294],"category_scores_gemma":[0.00024066554,0.000052994128,0.000068536254,0.00009093885,0.00012876301,0.000068562,0.000037426562,0.000058744616,2.8588457e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006803652,0.000020839969,0.00658062,0.000008247147,0.0000618541,7.9911297e-7,0.0002536177,0.000038759026,0.9898265,0.00054067944,3.9286738e-7,0.002599676],"study_design_scores_gemma":[0.0002145449,0.00024051772,0.0068695825,0.000019107025,0.000044698154,6.540743e-7,0.0005555767,0.016264208,0.95969844,0.015965136,0.000016078327,0.00011148493],"about_ca_topic_score_codex":0.00012214553,"about_ca_topic_score_gemma":0.000065385335,"teacher_disagreement_score":0.1466958,"about_ca_system_score_codex":0.000025900981,"about_ca_system_score_gemma":0.0000045890965,"threshold_uncertainty_score":0.21610378},"labels":[],"label_agreement":null},{"id":"W2606129866","doi":"10.1007/978-1-4939-6899-2_18","title":"A Rapid Procedure for the Purification of 8-Aminopyrene Trisulfonate (APTS)-Labeled Glycans for Capillary Electrophoresis (CE)-Based Enzyme Assays","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kelowna General Hospital; Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia; Simon Fraser University","funders":"","keywords":"Glycan; Capillary electrophoresis; Chromatography; Fluorophore; Chemistry; Elution; Polyacrylamide gel electrophoresis; Reagent; Polyacrylamide; Electrophoresis; Gel electrophoresis; Fluorescence; Biochemistry; Enzyme; Glycoprotein; Organic chemistry","score_opus":0.03817037031449228,"score_gpt":0.4009698946944499,"score_spread":0.3627995243799576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606129866","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06457557,0.0043479,0.9269269,0.0014915032,0.00013355243,0.0022521752,0.000097268174,0.000010092383,0.00016503652],"genre_scores_gemma":[0.52969086,0.00062468176,0.466556,0.00036423208,0.00013893309,0.0018157638,0.00038826838,0.00006504624,0.0003562128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785525,0.0005470721,0.00043244622,0.0005739801,0.00011943336,0.00047183834],"domain_scores_gemma":[0.99791116,0.00028423627,0.00034921177,0.0010360772,0.00035493125,0.000064407825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021961886,0.00022974376,0.00034862282,0.00014220583,0.0002807189,0.000035301506,0.00077312026,0.00041527627,0.000017527153],"category_scores_gemma":[0.003600915,0.00018016186,0.0002396714,0.0001255635,0.00029832718,0.000004453009,0.00010297546,0.0001617722,7.004845e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009170694,0.00008297797,0.00025518885,0.000076049386,0.00009513572,0.0000010128406,0.000015465812,0.000083077925,0.96834433,0.0013243849,0.00023522209,0.028570103],"study_design_scores_gemma":[0.0022977407,0.00089383556,0.00059607,0.000011713194,0.000039734186,0.0000034174868,0.000016750842,0.0053346143,0.955953,0.0017155048,0.032939963,0.0001976609],"about_ca_topic_score_codex":0.00006575378,"about_ca_topic_score_gemma":0.00006126404,"teacher_disagreement_score":0.46511528,"about_ca_system_score_codex":0.000030049883,"about_ca_system_score_gemma":0.00031596638,"threshold_uncertainty_score":0.7346788},"labels":[],"label_agreement":null},{"id":"W2606174185","doi":"10.1007/978-1-4939-6899-2","title":"Protein-Carbohydrate Interactions","year":2017,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Carbohydrate; Chemistry; Biochemistry","score_opus":0.035858703057777795,"score_gpt":0.42914838850119125,"score_spread":0.3932896854434135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606174185","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007877075,0.0023048306,0.45031774,0.0004030707,0.00073766714,0.0016384255,0.00008087023,0.00003510335,0.54369456],"genre_scores_gemma":[0.0004585298,0.00015197793,0.25142896,0.00025434577,0.00038736346,0.0004120459,0.0008629796,0.00012193886,0.74592185],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99683726,0.0010264907,0.00048535664,0.0009626571,0.00014616418,0.0005421026],"domain_scores_gemma":[0.9978093,0.000040148123,0.00033076547,0.0015096068,0.00017562085,0.00013459564],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011426707,0.00044640878,0.00053158525,0.0003771214,0.00013542197,0.00006333479,0.0008710261,0.0010041367,0.00020760731],"category_scores_gemma":[0.0010062276,0.00044875973,0.0002941478,0.00007205334,0.0003616189,0.0000036967851,0.0005967429,0.0008648923,0.00008938526],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006955297,0.000040737283,0.0000226438,0.000041534007,0.00010923583,0.000053677777,0.000009007321,0.0000096103495,0.9745212,0.0038237807,0.0019035384,0.01939547],"study_design_scores_gemma":[0.00041843453,0.00021851785,0.00001406092,0.000079628255,0.000016242268,0.000016800563,0.0000025666814,0.00005123262,0.24003497,0.013289648,0.74543333,0.00042455003],"about_ca_topic_score_codex":0.000037730646,"about_ca_topic_score_gemma":0.00011711629,"teacher_disagreement_score":0.7435298,"about_ca_system_score_codex":0.00010191691,"about_ca_system_score_gemma":0.00059035985,"threshold_uncertainty_score":0.9997964},"labels":[],"label_agreement":null},{"id":"W2606226098","doi":"10.1007/978-1-4939-6899-2_4","title":"An Improved Kinetic Assay for the Characterization of Metal-Dependent Pectate Lyases","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"","keywords":"Yersinia enterocolitica; Cleave; Pectate lyase; Metal; Chemistry; Catalysis; Polysaccharide; Kinetics; Combinatorial chemistry; Biochemistry; Enzyme; Stereochemistry; Bacteria; Biology; Organic chemistry; Physics; Genetics","score_opus":0.03283683113360598,"score_gpt":0.3444925389801672,"score_spread":0.3116557078465612,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606226098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8363727,0.00015306716,0.16193187,0.0005596937,0.0002930601,0.00043876038,0.00016107892,0.0000128210595,0.00007698511],"genre_scores_gemma":[0.96183914,0.00011681508,0.037515555,0.0001734167,0.00008245577,0.000060914346,0.00012513604,0.0000015613616,0.00008501757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988738,0.00047179626,0.00020153173,0.00022346241,0.000038603346,0.0001908297],"domain_scores_gemma":[0.9991024,0.0004522104,0.00021752842,0.00015920932,0.000038697817,0.000029940034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012794129,0.000098659235,0.00019673402,0.0000110977035,0.00014149009,0.000035825313,0.0005022553,0.00009935205,0.00005060573],"category_scores_gemma":[0.00033535075,0.000033425807,0.00007896529,0.00004210903,0.0000842601,0.0000395631,0.00006099514,0.000066882174,6.7870883e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025505162,0.000025862,0.0008502624,0.0000028369143,0.000012613072,8.8441936e-7,0.000013865268,0.0000017074938,0.8714173,0.00036953174,3.5067777e-7,0.12727928],"study_design_scores_gemma":[0.00014867303,0.0003287582,0.043829028,0.000005397702,0.000028086588,0.0000034682005,0.000021930331,0.0028443611,0.9489813,0.0020729974,0.0016187604,0.000117251104],"about_ca_topic_score_codex":0.000496195,"about_ca_topic_score_gemma":0.00018049518,"teacher_disagreement_score":0.12716202,"about_ca_system_score_codex":0.000005125874,"about_ca_system_score_gemma":0.0000048555726,"threshold_uncertainty_score":0.1363065},"labels":[],"label_agreement":null},{"id":"W2606255243","doi":"10.1007/978-1-4939-6899-2_11","title":"Characterization of Protein-Carbohydrate Interactions by NMR Spectroscopy","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolites in Food Biotechnology","field":"Nursing","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Queen's University; Agriculture and Agri-Food Canada","funders":"","keywords":"Heteronuclear molecule; Heteronuclear single quantum coherence spectroscopy; Chemistry; Dissociation constant; Nuclear magnetic resonance spectroscopy; Carbohydrate; Spectroscopy; Titration; Crystallography; Stereochemistry; Biochemistry; Physical chemistry; Physics","score_opus":0.017512636765463933,"score_gpt":0.3849669751120733,"score_spread":0.36745433834660934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606255243","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56100434,0.00013036115,0.43560484,0.0014151131,0.0009725203,0.0003881904,0.00003239547,0.000039413266,0.0004128514],"genre_scores_gemma":[0.3568869,0.000014478506,0.64267373,0.00018987955,0.000050083047,0.00005129907,0.000043974218,0.000031992087,0.000057657322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790084,0.0008913289,0.00043360874,0.0004020235,0.00004544164,0.00032677414],"domain_scores_gemma":[0.9984591,0.00004835274,0.0004951078,0.0009082293,0.00005739454,0.000031841762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000647579,0.00017935445,0.0004095867,0.00025018468,0.00010609165,0.000027609245,0.0006009793,0.0003272069,0.000053896783],"category_scores_gemma":[0.0011122667,0.00018142397,0.00008128976,0.000157039,0.00042153354,0.000073383395,0.00020974402,0.0003849091,0.000007978588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080495105,0.000070010734,0.00043519272,0.000016070864,0.000021387952,0.0000024629064,0.000040680745,3.841018e-7,0.98086715,0.002474869,0.000006380982,0.015984919],"study_design_scores_gemma":[0.00030656112,0.00017985716,0.000387557,0.00003342977,0.000017909955,0.000005054515,0.0000052306536,0.00007887376,0.9817211,0.0067501445,0.010360756,0.00015353684],"about_ca_topic_score_codex":0.0000904212,"about_ca_topic_score_gemma":0.000013848286,"teacher_disagreement_score":0.20706892,"about_ca_system_score_codex":0.000053619995,"about_ca_system_score_gemma":0.000013151831,"threshold_uncertainty_score":0.7398254},"labels":[],"label_agreement":null},{"id":"W2606256847","doi":"10.1007/7651_2017_24","title":"Analysis of S1P Receptor Expression by Uterine Immune Cells Using Standardized Multi-parametric Flow Cytometry","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Flow cytometry; Immune system; Decidua; Cell biology; Biology; Receptor; Receptor expression; Immunology; Placenta; Fetus; Pregnancy","score_opus":0.0350200316235607,"score_gpt":0.41545157829722507,"score_spread":0.38043154667366436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606256847","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20552589,0.017360082,0.77535677,0.000016647455,0.0011075909,0.00029378306,0.00021740118,0.000018795763,0.00010305831],"genre_scores_gemma":[0.34794122,0.0001890083,0.6513092,0.000013721054,0.000012716006,0.000024489553,0.00012853829,0.00002473529,0.0003563936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9945189,0.0035441539,0.0007440255,0.00073435385,0.00004182834,0.00041675608],"domain_scores_gemma":[0.9973445,0.00027631363,0.00071341015,0.0014999183,0.00013939981,0.000026483505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002588896,0.0002746402,0.0012775945,0.00097608584,0.00018508291,0.000017467548,0.0006512917,0.00054037635,0.00037970513],"category_scores_gemma":[0.0013434589,0.00023398006,0.00036482484,0.00079792016,0.00044524999,0.00006124985,0.00037195926,0.00030035138,0.000011319455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012055013,0.00011905784,0.012612475,0.000033591423,0.00095279707,0.000004551273,0.00009274478,0.00010733675,0.97404146,0.000015483409,0.000019511901,0.0118804565],"study_design_scores_gemma":[0.0014460813,0.00012410534,0.00335244,0.00005620746,0.00023823032,0.000005116285,0.00003521766,0.00016298235,0.992095,0.000047049074,0.0021977413,0.00023982515],"about_ca_topic_score_codex":0.0002594068,"about_ca_topic_score_gemma":0.000002427797,"teacher_disagreement_score":0.14241534,"about_ca_system_score_codex":0.000060420738,"about_ca_system_score_gemma":0.000037992497,"threshold_uncertainty_score":0.954143},"labels":[],"label_agreement":null},{"id":"W2606271201","doi":"10.1007/978-1-4939-6899-2_5","title":"Colorimetric Detection of Acetyl Xylan Esterase Activities","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Ella ja Georg Ehrnroothin Säätiö","keywords":"Xylan; Esterase; Acetylation; Chemistry; Biochemistry; Colorimetry; Carbohydrate; Organic chemistry; Chromatography; Polysaccharide; Enzyme","score_opus":0.027784535668186464,"score_gpt":0.3782218279867642,"score_spread":0.35043729231857773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606271201","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91386694,0.00021456029,0.07507265,0.000028122657,0.00012949873,0.00003489867,0.000011126864,0.000019346518,0.010622842],"genre_scores_gemma":[0.9405586,0.000026666728,0.059128363,0.000012591569,0.0000419437,0.000023361346,0.0000046496393,0.000013279103,0.00019054457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99907035,0.00017831441,0.00023205504,0.00026823053,0.000051178373,0.0001998579],"domain_scores_gemma":[0.9987152,0.000329811,0.00022650172,0.00066621136,0.000024288061,0.00003795223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005110916,0.0001352744,0.00031383394,0.000097044365,0.000080214595,0.000019292896,0.00033488427,0.0002785595,0.00011845995],"category_scores_gemma":[0.0014001863,0.00013553548,0.000107977394,0.000087372064,0.0002149489,0.000035253328,0.00013026604,0.00019128161,0.0000011886966],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046232864,0.000035525452,0.0023299116,0.000057716574,0.000030934654,0.00001345509,0.000036801397,0.0000030766303,0.95504934,0.00006759633,5.6563124e-7,0.042328827],"study_design_scores_gemma":[0.00026393155,0.000026376092,0.00019142398,0.00001621934,0.000020238642,0.000009075623,0.0000636136,0.000097789045,0.9976611,0.00094636,0.0005731642,0.00013068286],"about_ca_topic_score_codex":0.000119558536,"about_ca_topic_score_gemma":0.000012400517,"teacher_disagreement_score":0.042611767,"about_ca_system_score_codex":0.000045910187,"about_ca_system_score_gemma":0.000023375762,"threshold_uncertainty_score":0.55269766},"labels":[],"label_agreement":null},{"id":"W2606332967","doi":"10.1007/978-1-4939-6899-2_16","title":"Analysis of Complex Carbohydrate Composition in Plant Cell Wall Using Fourier Transformed Mid-Infrared Spectroscopy (FT-IR)","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ruminant Nutrition and Digestive Physiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Genome Alberta","keywords":"Fourier transform infrared spectroscopy; Chemistry; Infrared spectroscopy; Rumen; Cell wall; Biofuel; Analytical Chemistry (journal); Principal component analysis; Infrared; Hydrolysis; Fourier transform; Spectroscopy; Materials science; Biochemistry; Chromatography; Biology; Chemical engineering; Mathematics; Organic chemistry; Physics; Biotechnology; Optics","score_opus":0.053912972870410615,"score_gpt":0.365107013177762,"score_spread":0.31119404030735137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606332967","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9834337,0.00009550862,0.015022211,0.0003023199,0.000072970644,0.00019869652,0.00009022824,0.000009966104,0.00077440275],"genre_scores_gemma":[0.910502,0.000053995955,0.088925615,0.00016614265,0.000017086117,0.0000123255795,0.00031434555,0.0000014644942,0.0000070179194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794227,0.0009029099,0.00039678538,0.00036349584,0.00006503618,0.0003295234],"domain_scores_gemma":[0.9993101,0.00021216608,0.00023035322,0.00014826657,0.00004459046,0.000054552274],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005284413,0.0001637142,0.00059853605,0.00013975945,0.00011250456,0.000018934757,0.0003366832,0.00018763162,0.000086163906],"category_scores_gemma":[0.00005546259,0.00008390958,0.0001877473,0.00041009858,0.00023662813,0.00004225691,0.00005938278,0.00013941,9.047406e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011336696,0.00013634964,0.027696433,0.0000069631415,0.00004306866,0.000016122582,0.00004951371,0.00010310808,0.97066414,0.00024409118,0.0000022605009,0.0009245976],"study_design_scores_gemma":[0.0004813496,0.00022852869,0.31402576,0.000017235756,0.000088365254,0.000001790455,0.000048835296,0.008484992,0.67241764,0.0037688694,0.00023765556,0.00019894993],"about_ca_topic_score_codex":0.0010505619,"about_ca_topic_score_gemma":0.00045108178,"teacher_disagreement_score":0.29824647,"about_ca_system_score_codex":0.000041649368,"about_ca_system_score_gemma":0.000010227684,"threshold_uncertainty_score":0.34217337},"labels":[],"label_agreement":null},{"id":"W2606619322","doi":"10.1007/978-1-4939-6899-2_21","title":"Identification of Genes Involved in the Degradation of Lignocellulose Using Comparative Transcriptomics","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Agriculture and Agri-Food Canada","funders":"","keywords":"Transcriptome; Organism; Biology; Computational biology; Gene; Identification (biology); Lignocellulosic biomass; Biotechnology; Biomass (ecology); Biofuel; Gene expression; Genetics; Botany; Ecology","score_opus":0.08563396612060215,"score_gpt":0.3856367082627797,"score_spread":0.30000274214217754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2606619322","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6008233,0.00044728603,0.39840627,0.000035356945,0.00014860227,0.00010074408,0.0000020351192,0.0000037243792,0.000032721513],"genre_scores_gemma":[0.87723076,0.00008716017,0.12265035,0.000008867292,0.0000071568124,0.0000035390283,0.000005880599,0.0000036986653,0.0000025732968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99917585,0.0003588847,0.00026329624,0.000100993115,0.000032908847,0.00006805411],"domain_scores_gemma":[0.99957645,0.000029763793,0.00010712262,0.00025218428,0.000028145987,0.0000063433413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092855626,0.00006011722,0.00014787096,0.00010041159,0.000022917755,0.0000060578077,0.0001949266,0.00009005778,0.0000020042892],"category_scores_gemma":[0.00004415585,0.00004879257,0.000033263088,0.000085777305,0.0001187586,0.000036512385,0.000012805386,0.0000804562,2.467492e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007995717,0.000017527489,0.002261085,0.000048388967,0.000007842416,3.0478276e-7,0.00032461307,0.00066364027,0.9935669,0.00039317532,0.0000011845497,0.002707347],"study_design_scores_gemma":[0.00017290191,0.000013877617,0.0016513244,0.0000083218465,0.000007859043,6.8928875e-7,0.0002745867,0.031008486,0.9657384,0.0009922851,0.00008452453,0.000046730536],"about_ca_topic_score_codex":0.000056972796,"about_ca_topic_score_gemma":0.000013399105,"teacher_disagreement_score":0.2764075,"about_ca_system_score_codex":0.000016168526,"about_ca_system_score_gemma":0.000007307289,"threshold_uncertainty_score":0.19897033},"labels":[],"label_agreement":null},{"id":"W2607124319","doi":"10.1007/978-1-4939-6828-2","title":"Cryopreservation of Mammalian Gametes and Embryos","year":2017,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Fertility Centre","funders":"","keywords":"Cryopreservation; Andrology; Embryo; Biology; Cell biology; Medicine","score_opus":0.05412722229103226,"score_gpt":0.424500681968667,"score_spread":0.37037345967763474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607124319","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04377325,0.03869055,0.38015887,0.0024875093,0.0018270445,0.0036745435,0.00013675523,0.00008907389,0.5291624],"genre_scores_gemma":[0.0015525355,0.00033491082,0.7638203,0.00041386613,0.00020412522,0.000055700857,0.00031050033,0.00004756018,0.23326048],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9979273,0.00080423855,0.00041524036,0.00061160367,0.00005322895,0.00018836501],"domain_scores_gemma":[0.998354,0.00019100787,0.00027745945,0.00095448934,0.00017433445,0.00004870329],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019534442,0.000216886,0.00084880064,0.00020396434,0.000029041923,0.0000033775473,0.00017587589,0.00090279034,0.000057803867],"category_scores_gemma":[0.003897406,0.00018182657,0.00011784335,0.000035143843,0.00082495634,0.000016620348,0.00016190762,0.0004642152,0.0000025111526],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017417826,0.00011723568,0.030662384,0.00080304145,0.0003718882,0.00008480081,0.000118600896,4.2843604e-7,0.86850536,0.008334688,0.0008499162,0.08840985],"study_design_scores_gemma":[0.0022533382,0.0019044697,0.26257065,0.0005007891,0.00051732716,0.00012505379,0.000016554879,0.0000584055,0.26619387,0.29875883,0.16638638,0.00071432383],"about_ca_topic_score_codex":0.000033268094,"about_ca_topic_score_gemma":0.0000047062535,"teacher_disagreement_score":0.60231155,"about_ca_system_score_codex":0.00004332647,"about_ca_system_score_gemma":0.00016758362,"threshold_uncertainty_score":0.74146724},"labels":[],"label_agreement":null},{"id":"W2607162877","doi":"10.1007/978-1-4939-6899-2_15","title":"Determining the Localization of Carbohydrate Active Enzymes Within Gram-Negative Bacteria","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Alberta; University of Lethbridge","funders":"Alberta Innovates","keywords":"Periplasmic space; Cytoplasm; Signal peptide; Bacterial outer membrane; Subcellular localization; Biochemistry; Biology; Enzyme; Bacteria; Gram-negative bacteria; Lysis; Extracellular; Protein subcellular localization prediction; Secretory protein; Peptide sequence; Secretion; Escherichia coli; Gene; Genetics","score_opus":0.031464374651399035,"score_gpt":0.4140591108266797,"score_spread":0.3825947361752806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607162877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5137379,0.00010087495,0.48438135,0.0001530321,0.00020156683,0.00039951983,0.000016541835,0.0000054358907,0.0010037591],"genre_scores_gemma":[0.8860413,0.000029526258,0.11353358,0.00013402598,0.00004018715,0.00005792282,0.000047004396,0.00001924876,0.00009721814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979498,0.001118614,0.00028202368,0.00033554374,0.00008242005,0.00023164444],"domain_scores_gemma":[0.9987564,0.000068927395,0.00028591452,0.0006776256,0.00016991734,0.00004123033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009633062,0.00014742916,0.00021089235,0.00007894492,0.00017040974,0.00003216313,0.0004925014,0.00021793273,0.000017124265],"category_scores_gemma":[0.0024587766,0.00011040251,0.00007640692,0.00008842175,0.0004563108,0.0000058698283,0.0002904979,0.00015849972,0.0000015349892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009336112,0.00002766815,0.006139451,0.000008419036,0.000039916882,0.0000024353178,0.00014582512,0.00013653626,0.9790853,0.0009818083,0.000006138911,0.013333144],"study_design_scores_gemma":[0.000558103,0.00020854462,0.009333607,0.000012012263,0.000008358751,0.0000018508501,0.00006501095,0.0011846724,0.9853782,0.0021654877,0.0009581362,0.00012603783],"about_ca_topic_score_codex":0.000121271485,"about_ca_topic_score_gemma":0.00010554239,"teacher_disagreement_score":0.37230337,"about_ca_system_score_codex":0.000015132192,"about_ca_system_score_gemma":0.00007630729,"threshold_uncertainty_score":0.45020837},"labels":[],"label_agreement":null},{"id":"W2607253701","doi":"10.1007/978-1-4939-6899-2_17","title":"Separation and Visualization of Glycans by Fluorophore-Assisted Carbohydrate Electrophoresis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Glycan; Chemistry; Fluorophore; Carbohydrate; Biochemistry; Glycoside hydrolase; Chitobiose; Electrophoresis; Chromatography; Hydrolysis; Glycoprotein; Fluorescence","score_opus":0.017547211587832578,"score_gpt":0.3799559167218535,"score_spread":0.36240870513402096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607253701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9180783,0.00084384595,0.07709353,0.0000818917,0.000048756294,0.000059723247,0.000024493496,0.000020574087,0.003748861],"genre_scores_gemma":[0.95571893,0.0002502381,0.043680094,0.000026202522,0.0000222232,0.000033264954,0.0000774679,0.000023710636,0.00016789026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987661,0.00023522381,0.00033727632,0.00036938014,0.00006735084,0.00022466411],"domain_scores_gemma":[0.99895537,0.00012622506,0.00027396434,0.00053734443,0.000054845015,0.000052251842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004111852,0.00017282214,0.00035062956,0.000058973448,0.00010271908,0.000031896212,0.0002470794,0.00030667393,0.000079064754],"category_scores_gemma":[0.0006412787,0.00017603925,0.000067395515,0.00008710078,0.00024290696,0.00003429574,0.00008710522,0.000117189215,4.5827377e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051497493,0.000038381793,0.0025458268,0.000055109413,0.000039905084,0.0000075126604,0.000052799613,0.000002614109,0.9908847,0.0005091866,0.000014613923,0.0057978234],"study_design_scores_gemma":[0.00029658622,0.000025866664,0.00033605442,0.000021086693,0.000036065794,0.0000061220903,0.000017351838,0.00066975044,0.99646896,0.0015177017,0.0004339548,0.00017050745],"about_ca_topic_score_codex":0.0002686112,"about_ca_topic_score_gemma":0.000021897924,"teacher_disagreement_score":0.037640575,"about_ca_system_score_codex":0.00004490577,"about_ca_system_score_gemma":0.000031523672,"threshold_uncertainty_score":0.71786726},"labels":[],"label_agreement":null},{"id":"W2607295403","doi":"10.1007/978-1-4939-6899-2_6","title":"Methods for Determining Glycosyltransferase Kinetics","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glycosyltransferase; Biochemistry; Nucleotide sugar; Chemistry; Enzyme; Kinetics; Nucleotide; Enzyme kinetics; Active site; Gene","score_opus":0.053230039713064455,"score_gpt":0.5032448776246499,"score_spread":0.4500148379115854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607295403","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.030925972,0.0005809796,0.9653945,0.00029144326,0.0003090231,0.0006168332,0.000017306376,0.000013360868,0.0018505728],"genre_scores_gemma":[0.08384067,0.0000756958,0.9149986,0.00032419045,0.0001101772,0.00024854997,0.0000702048,0.000044422613,0.0002875001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99725384,0.0010967063,0.00037805573,0.00065278343,0.00006809925,0.00055050856],"domain_scores_gemma":[0.9983298,0.00015607198,0.00013155057,0.001118617,0.00013945015,0.0001245061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002334551,0.00024110737,0.0003320429,0.00014817112,0.00021282489,0.00007322908,0.00075702934,0.0004074071,0.000030144289],"category_scores_gemma":[0.0038237066,0.00023727203,0.00019257696,0.00007089001,0.000273018,0.0000049117193,0.0002693411,0.0001982274,0.0000034434624],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105975305,0.000040412793,0.00053734396,0.000017260922,0.000027037853,0.000005769061,0.000011695824,0.000023280167,0.7697371,0.0014846813,0.000013399195,0.22799605],"study_design_scores_gemma":[0.001246303,0.0005913515,0.00059889874,0.0000108949425,0.0000126752075,0.000015698619,0.000012613176,0.0009833582,0.91882086,0.0062357397,0.0711943,0.00027732053],"about_ca_topic_score_codex":0.000022512982,"about_ca_topic_score_gemma":0.000025735366,"teacher_disagreement_score":0.22771873,"about_ca_system_score_codex":0.000021364009,"about_ca_system_score_gemma":0.00007275396,"threshold_uncertainty_score":0.9675673},"labels":[],"label_agreement":null},{"id":"W2607312928","doi":"10.1007/978-1-4939-6828-2_3","title":"Chapter 3 Current Challenges in Immature Oocyte Cryopreservation","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Vitrification; Germinal vesicle; Oocyte; Andrology; Cryopreservation; In vitro maturation; Biology; Embryo; Cell biology; Medicine","score_opus":0.3843345262445309,"score_gpt":0.5659510813150327,"score_spread":0.18161655507050178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607312928","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010013147,0.98893,0.0069568553,0.0003758521,0.0008336059,0.0010763644,0.000009568366,0.000020289795,0.0017874825],"genre_scores_gemma":[0.0000033456924,0.9490205,0.050298337,0.00004345113,0.00017660465,0.00021280658,0.00014521081,0.000030228408,0.000069485584],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952646,0.0024941163,0.0007315946,0.0010814471,0.000064883716,0.00036338693],"domain_scores_gemma":[0.9978134,0.00019523497,0.0003924197,0.0014449662,0.000094532596,0.00005945147],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0033819883,0.00041528078,0.002276802,0.00042440815,0.000033824275,0.000005769546,0.00037367104,0.0011852841,0.000038585076],"category_scores_gemma":[0.0030746623,0.0003033084,0.00037500868,0.00011494899,0.00027373293,0.000027672353,0.00022598889,0.0013811953,0.000018724551],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003642798,0.00008292477,0.000087113294,0.0037332338,0.000073569245,0.000051397572,0.000033575157,3.173945e-8,0.00020513893,0.0010746197,0.0000038564444,0.99429023],"study_design_scores_gemma":[0.00030921545,0.00011761049,0.0038174947,0.0031081776,0.00014700365,0.00005224925,0.0000029197508,0.0000023579744,0.000091348775,0.0038023689,0.98830533,0.00024392443],"about_ca_topic_score_codex":0.000011269407,"about_ca_topic_score_gemma":0.000008262828,"teacher_disagreement_score":0.99404633,"about_ca_system_score_codex":0.000106853266,"about_ca_system_score_gemma":0.0001223834,"threshold_uncertainty_score":0.9999419},"labels":[],"label_agreement":null},{"id":"W2610413339","doi":"10.1007/978-1-4939-6955-5_22","title":"Analyzing Heterochromatic DNA Double Strand Break (DSB) Repair in Response to Ionizing Radiation","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Heterochromatin; Euchromatin; Cell biology; DNA; DNA repair; Biology; Heterochromatin protein 1; Ionizing radiation; Double strand; Molecular biology; Genetics; Chromatin; Irradiation; Physics","score_opus":0.02312407861145024,"score_gpt":0.3842887492689517,"score_spread":0.36116467065750146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610413339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7127535,0.00037022267,0.28587124,0.0002349373,0.00020530168,0.000359721,0.0000061945507,0.000025586573,0.0001732918],"genre_scores_gemma":[0.6029454,0.000028146504,0.39653963,0.0002076997,0.00004772618,0.00007993649,0.000024467414,0.000033554927,0.00009345197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665684,0.0015287641,0.00048482238,0.00075739843,0.000084306186,0.00048788317],"domain_scores_gemma":[0.9983566,0.00007784792,0.00019295691,0.0012139471,0.000045417175,0.000113240094],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0035320162,0.00025257067,0.000384516,0.00030614372,0.00012752543,0.000044165616,0.0005232909,0.00037401356,0.000011579993],"category_scores_gemma":[0.0014644528,0.00026819305,0.00016655884,0.00016016186,0.00009126188,0.000009732913,0.00033448634,0.00018101589,0.0000075716266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070082356,0.000044039913,0.0040111635,0.000017178934,0.000039066366,0.000046979083,0.00008991878,0.00019601833,0.9882635,0.00017360471,0.0000148750205,0.0064028287],"study_design_scores_gemma":[0.0017647303,0.00042759607,0.009970793,0.0000484195,0.000016649608,0.00002676753,0.000036273417,0.0005054303,0.9839352,0.0011881934,0.0017407371,0.00033923678],"about_ca_topic_score_codex":0.00012702064,"about_ca_topic_score_gemma":0.00016328887,"teacher_disagreement_score":0.110668376,"about_ca_system_score_codex":0.000078831334,"about_ca_system_score_gemma":0.00007926351,"threshold_uncertainty_score":0.99997705},"labels":[],"label_agreement":null},{"id":"W2610548715","doi":"10.1007/978-1-4939-6877-0_13","title":"Transcription Factor Binding Studies in CD4+ T Cells: siRNA Transfection, Chromatin Immunoprecipitation, and Liquid Luminescent DNA Precipitation Assay","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institut National Du Cancer; Ligue Contre le Cancer; Institute of Cancer Research; Fondation pour la Recherche Médicale; Agence Nationale de la Recherche","keywords":"Chromatin immunoprecipitation; Transfection; Biology; Immunoprecipitation; Transcription factor; Cell biology; Chromatin; Molecular biology; Effector; Gene expression; Promoter; Gene; Genetics","score_opus":0.04465088792206846,"score_gpt":0.3839573984008114,"score_spread":0.33930651047874294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2610548715","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.859703,0.0034686285,0.12952834,0.0003112829,0.0061747623,0.0004984567,0.000006448541,0.000047732923,0.00026131794],"genre_scores_gemma":[0.9794448,0.0009660983,0.018404532,0.00009796242,0.000030875493,0.00014482772,0.000092800896,0.000030467336,0.0007876335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99613917,0.0023698926,0.0006380417,0.00048441856,0.000031731546,0.00033674375],"domain_scores_gemma":[0.99890536,0.00034431904,0.0002672798,0.00034507114,0.00012066563,0.000017330825],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015957293,0.0002608321,0.0004526366,0.0004313865,0.00030528064,0.000034408644,0.0001919617,0.0004096296,0.00012101313],"category_scores_gemma":[0.00081505097,0.000251061,0.000098183904,0.00012913991,0.0003523341,0.00018702085,0.000047677993,0.0004199268,0.00003131457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030908152,0.000097421755,0.00074356893,0.000048963728,0.00011368419,0.000002820955,0.0032638912,0.0000139905505,0.98377234,0.00022536998,0.000043886106,0.011365008],"study_design_scores_gemma":[0.0017287993,0.00051988795,0.0063794344,0.00011838326,0.000033299264,0.000025405145,0.0012345932,0.00005691272,0.98627245,0.00031748248,0.0030470234,0.00026632502],"about_ca_topic_score_codex":0.00016875609,"about_ca_topic_score_gemma":0.00012267387,"teacher_disagreement_score":0.119741775,"about_ca_system_score_codex":0.00015628578,"about_ca_system_score_gemma":0.000026343758,"threshold_uncertainty_score":0.99999416},"labels":[],"label_agreement":null},{"id":"W2611268148","doi":"10.1007/978-1-4939-6887-9_2","title":"N- and C-Terminal Truncations to Enhance Protein Solubility and Crystallization: Predicting Protein Domain Boundaries with Bioinformatics Tools","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Ministero dello Sviluppo Economico; Fundação de Amparo à Pesquisa do Estado de São Paulo; Ontario Ministry of Economic Development and Innovation; Genome Canada; Wellcome Trust; GlaxoSmithKline; Pfizer; Eli Lilly and Company","keywords":"Domain (mathematical analysis); Protein expression; Protein domain; Computational biology; Heterologous; Crystallization; Protein crystallization; Solubility; Protein engineering; Construct (python library); Computer science; Expression (computer science); Chemistry; Bioinformatics; Biochemistry; Biology; Mathematics; Gene","score_opus":0.011226119207103289,"score_gpt":0.3497814702573261,"score_spread":0.3385553510502228,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2611268148","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4630006,0.00012409709,0.53586537,0.00018423621,0.000021517715,0.0005985096,0.00001469548,0.0000070224896,0.00018397252],"genre_scores_gemma":[0.29079366,0.0000068241,0.7087709,0.000109600616,0.00003070305,0.00019165776,0.000032791955,0.000013170898,0.000050727285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986625,0.0002655363,0.00029138944,0.00043293662,0.00006899678,0.00027864164],"domain_scores_gemma":[0.99899083,0.000018741754,0.00019391104,0.0006213066,0.00008404071,0.000091171365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007712023,0.00020259921,0.00023706803,0.000060450227,0.0004204784,0.00022798969,0.00024351265,0.0002217788,0.0000020587831],"category_scores_gemma":[0.000965104,0.00017476779,0.00002578278,0.00006392434,0.00066485035,0.000019114537,0.0003521004,0.0001407824,2.4567757e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118519776,0.000015094275,0.004588682,0.00007065272,0.000025857213,0.0000060664765,0.00020015736,0.000012373373,0.9686617,0.00318466,0.0000014129757,0.023114802],"study_design_scores_gemma":[0.00081546203,0.001233899,0.007721392,0.00013206495,0.000025201425,0.000088294284,0.00017779823,0.0007788633,0.96464676,0.018733907,0.0050551156,0.0005912221],"about_ca_topic_score_codex":0.000036292073,"about_ca_topic_score_gemma":0.00016508083,"teacher_disagreement_score":0.1729055,"about_ca_system_score_codex":0.000016068128,"about_ca_system_score_gemma":0.00012578686,"threshold_uncertainty_score":0.71268237},"labels":[],"label_agreement":null},{"id":"W2612058702","doi":"10.1007/7651_2017_36","title":"Composite Bioscaffolds Incorporating Decellularized ECM as a Cell-Instructive Component Within Hydrogels as In Vitro Models and Cell Delivery Systems","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Western University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Decellularization; Self-healing hydrogels; Tissue engineering; Extracellular matrix; Biomedical engineering; Materials science; Cartilage; Regenerative medicine; Chemistry; Stem cell; Nanotechnology; Cell biology; Anatomy; Biology","score_opus":0.022111966808913388,"score_gpt":0.33656456876623747,"score_spread":0.3144526019573241,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2612058702","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.675576,0.0077436585,0.31526065,0.00014201268,0.00039048726,0.00047994425,0.000004419216,0.000030199051,0.00037269123],"genre_scores_gemma":[0.62175447,0.000058125373,0.37788486,0.000041301028,0.000048471917,0.000036034067,0.000021688807,0.000029365112,0.00012565276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997314,0.0009815376,0.0005832382,0.0005990007,0.0001495817,0.00037263863],"domain_scores_gemma":[0.9986741,0.00016764004,0.00032240766,0.00057850784,0.000073069496,0.00018428986],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013798714,0.0003480609,0.00095211004,0.00036775458,0.00013704275,0.00003589482,0.00022493377,0.00034344968,0.0000023489106],"category_scores_gemma":[0.00017837017,0.00029279385,0.00007726901,0.00014497199,0.00038034117,0.000055495064,0.00020800793,0.00049302867,0.000003446499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024179436,0.00009803888,0.0022135754,0.00013449637,0.0000506852,0.0006176199,0.0005051192,0.0029814683,0.9901878,0.0013997513,6.890464e-7,0.0015689472],"study_design_scores_gemma":[0.0039204606,0.0003961426,0.0002484901,0.0002580902,0.00006813814,0.0002507245,0.00027447467,0.081218235,0.911559,0.0014731507,0.00004906775,0.00028404556],"about_ca_topic_score_codex":0.0009746223,"about_ca_topic_score_gemma":0.000004183944,"teacher_disagreement_score":0.07862883,"about_ca_system_score_codex":0.000110737106,"about_ca_system_score_gemma":0.00009081642,"threshold_uncertainty_score":0.99995244},"labels":[],"label_agreement":null},{"id":"W2615742986","doi":"10.1007/978-1-4939-6952-4_20","title":"AutoDock and AutoDockTools for Protein-Ligand Docking: Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1(BACE1) as a Case Study","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":218,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Montreal Clinical Research Institute","funders":"","keywords":"AutoDock; Docking (animal); Protein–ligand docking; Computer science; Virtual screening; Computational biology; Drug discovery; Structural bioinformatics; Chemistry; Protein structure; Biochemistry; Biology; Medicine","score_opus":0.05225687193293021,"score_gpt":0.4312786929087611,"score_spread":0.37902182097583087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2615742986","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44204646,0.00017561868,0.5544487,0.00046504496,0.00017091485,0.002509583,0.0000070158826,0.0000704657,0.00010619027],"genre_scores_gemma":[0.3268975,0.0000011118622,0.6719312,0.00010696483,0.00004664607,0.00088119705,0.0000028812833,0.000030730174,0.00010176251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9933766,0.0035963792,0.0006799792,0.001428471,0.00022119912,0.0006973517],"domain_scores_gemma":[0.9967563,0.0008155733,0.0005117004,0.001570224,0.00017445491,0.00017175332],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.006151697,0.0004393633,0.00071580877,0.00033508422,0.00058555865,0.0006248313,0.001399363,0.0002391294,0.0000033988877],"category_scores_gemma":[0.00310577,0.0004229573,0.00016224988,0.00026827876,0.00024260914,0.00043045258,0.0016243554,0.00042288672,0.000005217795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016042516,0.0006067828,0.002414387,0.00016482658,0.00024136642,0.0029421793,0.0040854793,0.0018233253,0.62507033,0.077462316,0.000014452289,0.28501415],"study_design_scores_gemma":[0.0055202898,0.0032557698,0.003244564,0.00023225186,0.00010982841,0.0024322753,0.00036828153,0.20574844,0.53890723,0.23491067,0.0034915446,0.0017788685],"about_ca_topic_score_codex":0.00043286357,"about_ca_topic_score_gemma":0.0000908072,"teacher_disagreement_score":0.28323528,"about_ca_system_score_codex":0.000093826224,"about_ca_system_score_gemma":0.00022912305,"threshold_uncertainty_score":0.9998222},"labels":[],"label_agreement":null},{"id":"W2617300349","doi":"10.1007/978-1-4939-7060-5_9","title":"CRENAME, A Molecular Microbiology Method Enabling Multiparametric Assessment of Potable/Drinking Water","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fecal contamination and water quality","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Potable water; Environmental science; Microbiology; Environmental health; Biology; Medicine; Environmental engineering","score_opus":0.035177327686637505,"score_gpt":0.43245965856073765,"score_spread":0.39728233087410014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2617300349","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23740678,0.000048505986,0.75898814,0.00021928082,0.00017342906,0.00022545781,0.0000034560142,0.000014919831,0.0029200127],"genre_scores_gemma":[0.40465042,0.0000054116304,0.59496313,0.00026833016,0.000005511344,0.000023467052,0.000011730036,0.000012472766,0.00005948531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995116,0.003034727,0.0005660012,0.00064467767,0.0001019367,0.0005366375],"domain_scores_gemma":[0.99851567,0.0002636548,0.00027370066,0.0008434611,0.000027979364,0.00007555168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0051833442,0.00022942343,0.000520685,0.00021008262,0.0001436674,0.000036261034,0.00077762007,0.0002814325,0.00038539237],"category_scores_gemma":[0.0007793101,0.00017693752,0.00014610881,0.0001742978,0.00039608602,0.000081005244,0.0009203536,0.00032133935,0.000017356972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000099556955,0.00007099868,0.027806379,0.000011330864,0.00002453008,0.000026544081,0.00010256019,0.0005009945,0.93990624,0.0016103873,0.0000019665797,0.029928127],"study_design_scores_gemma":[0.000710544,0.000112914546,0.015350716,0.000012457621,0.00002156463,0.000014452055,0.00002096636,0.0037893031,0.96960205,0.0073262607,0.0027703596,0.00026841575],"about_ca_topic_score_codex":0.0009233249,"about_ca_topic_score_gemma":0.00003672092,"teacher_disagreement_score":0.16724366,"about_ca_system_score_codex":0.00014084998,"about_ca_system_score_gemma":0.000014132675,"threshold_uncertainty_score":0.72153026},"labels":[],"label_agreement":null},{"id":"W2617507212","doi":"10.1007/978-1-4939-7063-6_5","title":"Purification of Plant Receptor Kinases from Plant Plasma Membranes","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Immunoprecipitation; Kinase; Membrane; Function (biology); Biochemistry; Receptor; Biology; Cell biology; Chemistry; Gene","score_opus":0.03094573876214256,"score_gpt":0.3572237588424351,"score_spread":0.32627802008029255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2617507212","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9318138,0.0016239667,0.063633054,0.00026843627,0.0007333892,0.0003317874,0.001087544,0.0000147341025,0.00049333734],"genre_scores_gemma":[0.40626943,0.0009767312,0.5882179,0.00015529511,0.0003614131,0.00011183789,0.0037329318,0.00004692496,0.0001275159],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99742144,0.000927753,0.00042792226,0.000828369,0.000068321504,0.0003261796],"domain_scores_gemma":[0.9980384,0.00011663872,0.00042805518,0.0012861316,0.00007097818,0.00005980312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008988258,0.00024489374,0.0004441847,0.000108800166,0.000089268906,0.0000149155685,0.0007520506,0.00046295844,0.000028652816],"category_scores_gemma":[0.0018894968,0.00022194,0.000112132904,0.00004737695,0.0004526448,0.000004901374,0.0002905808,0.00016038652,0.0000071749955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003314801,0.00007530166,0.0109879365,0.000016222064,0.00009038079,0.000011001969,0.000025804053,0.000008079634,0.98287344,0.0009026152,0.00009982096,0.00457789],"study_design_scores_gemma":[0.00052710174,0.00023074076,0.0064754053,0.000018854447,0.000018763958,0.00002280497,0.000022880482,0.000053344644,0.9613752,0.0010710964,0.02994473,0.00023907943],"about_ca_topic_score_codex":0.0003240173,"about_ca_topic_score_gemma":0.00009680016,"teacher_disagreement_score":0.52554435,"about_ca_system_score_codex":0.000016946547,"about_ca_system_score_gemma":0.00006886083,"threshold_uncertainty_score":0.90504503},"labels":[],"label_agreement":null},{"id":"W2620747802","doi":"10.1007/978-1-4939-7116-9_27","title":"Real-Time and End-Point PCR Diagnostics for Ebola Virus","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Reverse transcriptase; Ebolavirus; Ebola virus; Agarose; Virology; Molecular biology; Real-time polymerase chain reaction; Biology; Amplicon; Polymerase chain reaction; RNA; Chemistry; Virus; Biochemistry; Gene","score_opus":0.05241907364684729,"score_gpt":0.4801585824612865,"score_spread":0.42773950881443923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620747802","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17194359,0.000697563,0.8137045,0.0023471375,0.00028841375,0.001021934,0.000050334915,0.000043003147,0.009903514],"genre_scores_gemma":[0.022398332,0.0015450565,0.9748054,0.00031453982,0.000121535035,0.00013675794,0.000030054385,0.00003040665,0.00061788823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998892,0.0003180607,0.00018372988,0.00027512762,0.000046523284,0.00028456136],"domain_scores_gemma":[0.9988813,0.00047972097,0.000060604147,0.00041569368,0.000070641356,0.00009206967],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013002336,0.000109529865,0.00031029247,0.00012884385,0.00014385614,0.000026866906,0.00010389892,0.00018264679,0.00007723429],"category_scores_gemma":[0.0030226202,0.00009001296,0.00007254801,0.00004420429,0.00026272878,0.000021305716,0.00015655336,0.0001794082,0.000008707466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068117646,0.000048658978,0.0018781305,0.00002051911,0.000036427373,0.000044668093,0.000022112565,6.897804e-7,0.91421056,0.0023145133,0.00011510024,0.081240475],"study_design_scores_gemma":[0.002528313,0.0014512289,0.019445837,0.0000583646,0.00010026907,0.00011674098,0.00002122416,0.0024251423,0.93684614,0.016483825,0.020271197,0.0002517098],"about_ca_topic_score_codex":0.0005607424,"about_ca_topic_score_gemma":0.000032821765,"teacher_disagreement_score":0.16110092,"about_ca_system_score_codex":0.000031268704,"about_ca_system_score_gemma":0.00004576281,"threshold_uncertainty_score":0.36706218},"labels":[],"label_agreement":null},{"id":"W2620783107","doi":"10.1007/978-1-4939-7116-9_16","title":"Assessment of Inhibition of Ebola Virus Progeny Production by Antiviral Compounds","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Ebola virus; Virus; Virology; Biology; In vitro; Computational biology; Biochemistry","score_opus":0.04731283989166691,"score_gpt":0.49789467603991955,"score_spread":0.45058183614825265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2620783107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7413155,0.00014240434,0.25390628,0.00024159785,0.00014595792,0.00038072863,0.000010795871,0.000008593283,0.003848142],"genre_scores_gemma":[0.7878367,0.000048289894,0.21195832,0.000018893918,0.000022279943,0.000025083962,0.0000239605,0.000008055859,0.000058416725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866724,0.0005567984,0.00029405893,0.00022565511,0.00009663395,0.00015961495],"domain_scores_gemma":[0.99923646,0.000030182495,0.0001887549,0.00038281461,0.00013429185,0.000027482736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013956064,0.000085968124,0.00033020863,0.00016830653,0.000059801834,0.0000067312326,0.000073850584,0.00012914054,0.00001246911],"category_scores_gemma":[0.00037439642,0.00007296937,0.00007963089,0.00011170808,0.0003443653,0.00003732765,0.00009031323,0.00020228082,6.4258495e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038575396,0.00024609177,0.028026918,0.000064780244,0.000035559024,0.0000054349753,0.000013022731,0.0000013212037,0.95084804,0.0010839606,0.00003198997,0.019604325],"study_design_scores_gemma":[0.0005522141,0.0005601657,0.03377767,0.000045148023,0.000020755808,0.000013507559,0.000011097362,0.00021932517,0.96322536,0.00096586935,0.00055135845,0.000057533678],"about_ca_topic_score_codex":0.00032480786,"about_ca_topic_score_gemma":0.000012232741,"teacher_disagreement_score":0.046521205,"about_ca_system_score_codex":0.00004163246,"about_ca_system_score_gemma":0.00006698441,"threshold_uncertainty_score":0.29756045},"labels":[],"label_agreement":null},{"id":"W2621314594","doi":"10.1007/978-1-4939-7116-9_22","title":"Assessing Antiviral Countermeasures Using Mouse Models of Ebolavirus Infection","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Ebolavirus; Ebola virus; Virology; Biology; Computational biology; Virus","score_opus":0.18510165487403724,"score_gpt":0.5521904081156971,"score_spread":0.36708875324165985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2621314594","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49360776,0.0000825481,0.5040886,0.00002251338,0.00008882732,0.00010850231,0.0000015413943,0.00000946193,0.0019902824],"genre_scores_gemma":[0.7438121,0.0000397537,0.25602406,0.0000395715,0.000029569845,0.0000062693603,0.0000027826159,0.000014000682,0.00003188401],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985037,0.0006461805,0.00026760862,0.0002401681,0.00009726939,0.00024509124],"domain_scores_gemma":[0.9991874,0.000050269537,0.00015535108,0.00042919174,0.00013710228,0.000040705032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015019748,0.00011544209,0.00036143133,0.00027249623,0.0001471554,0.000052277846,0.00010115769,0.0001949033,0.000010202121],"category_scores_gemma":[0.0005351436,0.00010058091,0.00011226067,0.00010022457,0.00029336973,0.00017707756,0.00012126604,0.00028506143,0.0000010477778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003891441,0.00007205373,0.046022605,0.000034269375,0.000033910717,0.00001892678,0.000020279032,0.00018002465,0.91439164,0.00054323004,0.0000010138551,0.03864312],"study_design_scores_gemma":[0.0008637277,0.00020715926,0.01728238,0.00008651157,0.000042044798,0.000045296456,0.000017057368,0.037024904,0.9404948,0.003701921,0.000106288746,0.00012793957],"about_ca_topic_score_codex":0.0021091474,"about_ca_topic_score_gemma":0.000037129805,"teacher_disagreement_score":0.25020432,"about_ca_system_score_codex":0.000071405644,"about_ca_system_score_gemma":0.00009377984,"threshold_uncertainty_score":0.41015702},"labels":[],"label_agreement":null},{"id":"W2621976167","doi":"10.1007/978-1-4939-7037-7_7","title":"Detection and Typing of “Candidatus Phytoplasma ” spp. in Host DNA Extracts Using Oligonucleotide-Coupled Fluorescent Microspheres","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Phytoplasma; Oligonucleotide; Biology; Typing; DNA; Oligomer restriction; Computational biology; Gene; Molecular biology; Genetics; Polymerase chain reaction; Restriction fragment length polymorphism","score_opus":0.02962356252499991,"score_gpt":0.3306409440241203,"score_spread":0.3010173814991204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2621976167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99616235,0.00042872218,0.0028532029,0.000056840585,0.00016861025,0.00015891077,0.000009911215,0.000008310012,0.00015312183],"genre_scores_gemma":[0.9322497,0.00009769902,0.06755821,0.000040172396,0.000038910202,0.000005838412,0.0000033796132,0.0000018072441,0.000004241007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879,0.00026240625,0.00028191536,0.00033070796,0.000040465828,0.0002944579],"domain_scores_gemma":[0.99948627,0.00011942727,0.00019224262,0.00012379877,0.000028377472,0.00004989594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060203834,0.00014296238,0.00031364473,0.000028701425,0.0001265257,0.000036125388,0.00020397689,0.0001756759,0.000030306097],"category_scores_gemma":[0.0002525546,0.00007412442,0.000058743328,0.000105104285,0.00015444309,0.000057830704,0.00014876369,0.00015243859,0.000001044835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036575842,0.00002960135,0.11798855,0.000009379298,0.000005516419,0.000011016071,0.000023660816,0.000004625044,0.8482202,0.000055161578,2.291907e-7,0.033615444],"study_design_scores_gemma":[0.00022697198,0.00007598075,0.30815563,0.000041775693,0.000006218203,0.0000135257,0.000030493553,0.0011183929,0.6893291,0.0006648057,0.00021356538,0.00012358559],"about_ca_topic_score_codex":0.00042868374,"about_ca_topic_score_gemma":0.0023697072,"teacher_disagreement_score":0.19016708,"about_ca_system_score_codex":0.000027721922,"about_ca_system_score_gemma":0.000007658561,"threshold_uncertainty_score":0.30227062},"labels":[],"label_agreement":null},{"id":"W2623156990","doi":"10.1007/978-1-4939-6899-2_23","title":"Erratum to: Colorimetric Detection of Acetyl Xylan Esterase Activities","year":2017,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Xylan; Esterase; Chemistry; Biochemistry; Enzyme","score_opus":0.020753500440025757,"score_gpt":0.34096323931481154,"score_spread":0.32020973887478577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2623156990","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0043631685,0.0074674976,0.8563564,0.000180226,0.10668975,0.00093470217,0.00006887741,0.00028526963,0.023654105],"genre_scores_gemma":[0.061059687,0.0042669624,0.85687524,0.00052481046,0.0033375996,0.00034019223,0.0005475615,0.0004781629,0.072569795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982136,0.0005256266,0.00036574737,0.00045788527,0.00009823387,0.00033893288],"domain_scores_gemma":[0.99895793,0.00006633629,0.00016316751,0.00068623887,0.000049659397,0.00007664925],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00080424896,0.00033633073,0.00064440514,0.0009768252,0.00005221982,0.000022973489,0.00040489458,0.0011808192,0.00002634192],"category_scores_gemma":[0.00040667676,0.00033593478,0.00015190653,0.00039434023,0.00012704336,0.000042571268,0.00014652313,0.00097542506,0.000010492407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031953183,0.000023117293,0.000024561123,0.00041858308,0.00007713369,0.000009826644,0.000059348273,0.000053091262,0.9332124,0.000012954804,0.020928226,0.045148812],"study_design_scores_gemma":[0.0001987452,0.00024568068,0.00007715079,0.00006027207,0.00003268701,0.000010442745,0.000028650102,0.00033217174,0.6057028,0.000285424,0.39269692,0.00032904436],"about_ca_topic_score_codex":0.00007489318,"about_ca_topic_score_gemma":0.00002105083,"teacher_disagreement_score":0.3717687,"about_ca_system_score_codex":0.00013822125,"about_ca_system_score_gemma":0.000052048385,"threshold_uncertainty_score":0.9999093},"labels":[],"label_agreement":null},{"id":"W2626688244","doi":"10.1007/978-1-4939-7111-4_4","title":"Aspartic Protease Zymography Case Study: Detection of Fungal Acid Proteases by Zymography","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Saint Vincent University","funders":"","keywords":"Proteases; Zymography; Protease; Biochemistry; Chemistry; Gelatin; Enzyme; Chromatography","score_opus":0.019088901132746833,"score_gpt":0.37305032624661955,"score_spread":0.35396142511387274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2626688244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7575936,0.0005380823,0.24075466,0.00005974579,0.00019332563,0.0007868115,0.000016739104,0.0000142974695,0.000042752185],"genre_scores_gemma":[0.97006965,0.000033421475,0.029334966,0.00006377709,0.000069521404,0.0003362866,0.000037859012,0.000026471795,0.000028053155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99757063,0.0011083123,0.00038825325,0.00058736105,0.00008069024,0.00026477303],"domain_scores_gemma":[0.9985568,0.000010874974,0.00035067924,0.00088490616,0.000119686745,0.00007706808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009261944,0.00021491061,0.00027372394,0.00018545384,0.00018381594,0.000029888477,0.00027113163,0.00023110802,0.000009049826],"category_scores_gemma":[0.00059613463,0.00021116837,0.0001437396,0.00017535969,0.00026377352,0.000009933237,0.00015421853,0.00016619277,8.353257e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011632276,0.00034835402,0.043299668,0.000023720466,0.000076103395,0.00007252073,0.000048888753,0.00000274024,0.941103,0.000016661772,0.000008942177,0.014883107],"study_design_scores_gemma":[0.0008042232,0.00091778877,0.0028302518,0.00000793926,0.000038875445,0.00020505689,0.00016852036,0.000022547103,0.9933852,0.00016068133,0.001239756,0.00021917555],"about_ca_topic_score_codex":0.0001682634,"about_ca_topic_score_gemma":0.000056986697,"teacher_disagreement_score":0.21247606,"about_ca_system_score_codex":0.000008067983,"about_ca_system_score_gemma":0.00003065952,"threshold_uncertainty_score":0.8611196},"labels":[],"label_agreement":null},{"id":"W2626855776","doi":"10.1007/978-1-4939-7165-7_17","title":"Structural and Functional Characterization of Plant ARGONAUTE MID Domains","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Argonaute; Gene silencing; Nucleotide; RNA; RNA-induced silencing complex; Computational biology; Trans-acting siRNA; RNA silencing; Biology; Cell biology; Chemistry; Small interfering RNA; Genetics; RNA interference; Gene","score_opus":0.01779915435863462,"score_gpt":0.3298777214168995,"score_spread":0.3120785670582649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2626855776","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6308134,0.00007792996,0.36861968,0.000054659497,0.00018277654,0.0000815907,0.000050486793,0.000002553061,0.000116917574],"genre_scores_gemma":[0.91506916,0.0001395266,0.08430599,0.00013771701,0.00005254864,0.000019570873,0.00021683553,0.000013123027,0.000045512024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991774,0.0001462411,0.00018118044,0.0002896094,0.000040972864,0.00016459981],"domain_scores_gemma":[0.99940765,0.000012216496,0.00016864011,0.00033550194,0.000036542668,0.000039467675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034827067,0.00011642527,0.00017896888,0.0000468188,0.00007819183,0.000012843829,0.00016602708,0.00017184674,0.00001015922],"category_scores_gemma":[0.00021178443,0.00010456577,0.000043183372,0.00002234872,0.0001635162,0.0000035081796,0.00017744383,0.0000668027,2.7982017e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007312828,0.000010515489,0.0008590898,0.000015114677,0.000021588226,0.0000028237325,0.0000122208985,0.0000016466138,0.99114573,0.0039376086,5.729308e-7,0.003919952],"study_design_scores_gemma":[0.00041758263,0.00012931015,0.0066172937,0.000009630421,0.000009730511,0.000033823275,0.0000062086265,0.000111368725,0.9850059,0.0058002966,0.0017435214,0.0001153175],"about_ca_topic_score_codex":0.000014439197,"about_ca_topic_score_gemma":0.00000798604,"teacher_disagreement_score":0.28431368,"about_ca_system_score_codex":0.0000046498894,"about_ca_system_score_gemma":0.000034631637,"threshold_uncertainty_score":0.42640683},"labels":[],"label_agreement":null},{"id":"W2637643183","doi":"10.1007/978-1-4939-6863-3_11","title":"Mapping the Substrate Recognition Landscapes of Metalloproteases Using Comprehensive Mutagenesis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Thrombosis and Atherosclerosis Research Institute; McMaster University","funders":"","keywords":"Protease; Substrate (aquarium); Mutagenesis; Substrate specificity; Scissile bond; Phage display; Peptide library; High-throughput screening; Chemistry; Computational biology; Peptide; Combinatorial chemistry; Biology; Enzyme; Biochemistry; Peptide sequence; Mutation; Gene","score_opus":0.1415564312434299,"score_gpt":0.4300540773464429,"score_spread":0.288497646103013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2637643183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73794866,0.0002710556,0.26095855,0.00028092987,0.0000220734,0.00014190924,0.000007747926,0.000007957993,0.00036111893],"genre_scores_gemma":[0.6025291,0.000032446893,0.39707968,0.00027314277,0.000026545633,0.000013063452,0.000022175498,0.000008223779,0.000015643516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987093,0.000640739,0.00026121715,0.0001892513,0.000058402722,0.00014107433],"domain_scores_gemma":[0.9991487,0.00011370451,0.00022869592,0.0003630613,0.000113420785,0.000032379616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005732262,0.000100976446,0.00034034622,0.00016032526,0.00010927024,0.000012600139,0.000112318354,0.0000919848,0.000077838835],"category_scores_gemma":[0.0004632045,0.00007009197,0.00016257861,0.00012040999,0.00018226374,0.000023169254,0.000055883338,0.00011354076,0.0000024417302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002457641,0.000031022795,0.0029666945,0.00003309428,0.00010740497,0.00003889352,0.000051702165,0.000018939118,0.98304653,0.000058196492,0.0000010192144,0.013621904],"study_design_scores_gemma":[0.0007335961,0.000059695547,0.013582596,0.0002309651,0.00013622013,0.00005017445,0.00038996327,0.002359383,0.97909564,0.0030619353,0.00018058825,0.00011923145],"about_ca_topic_score_codex":0.00018355342,"about_ca_topic_score_gemma":0.000013800518,"teacher_disagreement_score":0.13612111,"about_ca_system_score_codex":0.000013146145,"about_ca_system_score_gemma":0.000029309385,"threshold_uncertainty_score":0.28582677},"labels":[],"label_agreement":null},{"id":"W2638695","doi":"10.1007/978-1-62703-709-9_23","title":"RNA–Protein Interactions: An Overview","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":132,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"RNA; Computational biology; RNA-binding protein; Computer science; Nucleic acid structure; Biology; Gene; Genetics","score_opus":0.13695020032859526,"score_gpt":0.533965066480463,"score_spread":0.39701486615186776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2638695","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010708814,0.8607641,0.1373975,0.000017584794,0.00020179785,0.001008535,0.000018503302,0.000016608692,0.00046829684],"genre_scores_gemma":[7.147415e-7,0.74969816,0.24758789,0.00011334446,0.0001508062,0.0006736121,0.0003993993,0.00007810439,0.0012979376],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9926419,0.0047629825,0.00077427394,0.0010372929,0.00010479275,0.00067873026],"domain_scores_gemma":[0.9981537,0.000086163906,0.0002801036,0.0011878815,0.00008897727,0.00020320203],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015236969,0.00055324833,0.0013528229,0.00036405577,0.000060545975,0.000051555468,0.00084584596,0.0008317576,0.0001578904],"category_scores_gemma":[0.0007515117,0.00046149277,0.0005275268,0.00035277053,0.00015423117,0.000006582631,0.00047751432,0.0007558971,0.000071195165],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053457034,0.000046940197,0.0000012963377,0.00089732895,0.000093694885,0.000014133087,0.0000022457373,5.828597e-7,0.26623794,0.0006538811,0.000049842507,0.7319968],"study_design_scores_gemma":[0.00017234,0.00031087507,5.0147787e-7,0.0012251288,0.000060491435,0.000058043774,0.0000072195185,0.000015253649,0.011055426,0.0010546846,0.9855458,0.0004942505],"about_ca_topic_score_codex":0.00013640983,"about_ca_topic_score_gemma":0.00003070668,"teacher_disagreement_score":0.9854959,"about_ca_system_score_codex":0.00007238487,"about_ca_system_score_gemma":0.00026270098,"threshold_uncertainty_score":0.9997837},"labels":[],"label_agreement":null},{"id":"W2645785097","doi":"10.1007/978-1-4939-6940-1_20","title":"Directed Evolution Methods to Rewire Signaling Networks","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; Computational biology; Evolutionary biology","score_opus":0.018465645687065557,"score_gpt":0.4171640590008839,"score_spread":0.39869841331381833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2645785097","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016358007,0.0012951662,0.9792103,0.00030080683,0.0006269872,0.00029591098,0.000006302511,0.000038344202,0.0018681744],"genre_scores_gemma":[0.06209239,0.00005754204,0.93641436,0.00059426815,0.00016197134,0.00006215846,0.00006591209,0.000039704068,0.00051170215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965071,0.0017738355,0.0003947447,0.0007292559,0.00006896262,0.00052608835],"domain_scores_gemma":[0.998305,0.000059723014,0.00019083079,0.001167069,0.00012215621,0.00015522128],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0023311689,0.00026050414,0.00033931137,0.00013938962,0.0002370779,0.00004600827,0.00067480747,0.00050439563,0.0000286682],"category_scores_gemma":[0.0020458815,0.0002683722,0.00014842667,0.00015710726,0.00019506436,0.0000035287017,0.00050551497,0.00023540547,0.0000060457187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058692654,0.00003235907,0.0033809564,0.000005196881,0.000041943673,0.0000052679898,0.000016950213,0.0051414953,0.93863434,0.0016079302,0.0000878325,0.050987065],"study_design_scores_gemma":[0.002714951,0.001304777,0.040421396,0.000095513584,0.00012212378,0.00008267128,0.00012410745,0.14537516,0.69423884,0.02155603,0.09179445,0.0021699483],"about_ca_topic_score_codex":0.00008741025,"about_ca_topic_score_gemma":0.00008504832,"teacher_disagreement_score":0.24439545,"about_ca_system_score_codex":0.000056017332,"about_ca_system_score_gemma":0.000069333655,"threshold_uncertainty_score":0.9999769},"labels":[],"label_agreement":null},{"id":"W2657389501","doi":"10.1007/978-1-4939-7021-6_15","title":"Analysis of Breast Cancer Cell Invasion Using an Organotypic Culture System","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Diamantina Institute, University of Queensland; Sydney Medical School; Leibniz-Gemeinschaft; Hansjörg Wyss Institute for Biologically Inspired Engineering, Harvard University; University of Michigan Comprehensive Cancer Center; Universität Innsbruck; Lékařská fakulta, Masarykova univerzita; Department of Obstetrics, Gynecology and Reproductive Sciences, University of Pittsburgh; Masarykova Univerzita; Université de Recherche Paris Sciences et Lettres; Wuhan University of Technology; Università degli Studi di Brescia; Central European Institute of Technology; Medizinische Universität Innsbruck; Massachusetts Institute of Technology; Wuhan University; Technische Universität München; Universiteit Utrecht; Turun Yliopisto; Deutsches Krebsforschungszentrum; Centre National de la Recherche Scientifique; Vysoké Učení Technické v Brně; University of Queensland; École Polytechnique Fédérale de Lausanne; Queensland University of Technology; Deutschen Konsortium für Translationale Krebsforschung; Magee-Womens Research Institute; Cancer Research UK; Pohang University of Science and Technology; University of California, Irvine; Koch Institute for Integrative Cancer Research, Massachusetts Institute of Technology; University of South Carolina; Tulane University; Leibniz-Institut für Polymerforschung Dresden; Universitätsklinikum Regensburg; Edwards Lifesciences; Harvard Stem Cell Institute; Rensselaer Polytechnic Institute; University of Pittsburgh","keywords":"Stromal cell; Metastasis; Stroma; Cancer cell; Extracellular matrix; Cancer; Breast cancer; Cancer research; Biology; Tumor microenvironment; Cell; Cancer-Associated Fibroblasts; Pathology; Tumor cells; Medicine; Cell biology; Immunohistochemistry; Genetics","score_opus":0.04975896572866271,"score_gpt":0.4360544455233694,"score_spread":0.3862954797947067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2657389501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6108918,0.0024639203,0.38513517,0.00006510378,0.00028025598,0.00021700363,0.00007206142,0.000015027645,0.00085966446],"genre_scores_gemma":[0.6296219,0.00019739136,0.3699462,0.00010052826,0.00004526134,0.000008621654,0.000022265496,0.000015822887,0.000041970245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986209,0.00047959446,0.00028674336,0.00033845424,0.00007606621,0.0001981959],"domain_scores_gemma":[0.9987602,0.00002069485,0.0002659992,0.00075441366,0.000115264374,0.00008341744],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007111112,0.00013564536,0.0006765944,0.00018947088,0.00006691952,0.0000103472,0.00019293951,0.00018733028,0.00012081895],"category_scores_gemma":[0.000056814035,0.0001058235,0.00017764207,0.00028629063,0.0001074641,0.00003529475,0.000091734735,0.0001265141,4.5156204e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071188304,0.00007304952,0.03934162,0.00012025369,0.00032042124,0.000023757371,0.00013728955,0.00013658394,0.94510597,0.00012820207,0.0000018890347,0.014539762],"study_design_scores_gemma":[0.0013672275,0.00017295823,0.039238058,0.00015074803,0.0040158047,0.000045822617,0.0004660737,0.004392648,0.9492697,0.000054188935,0.0005816336,0.00024515364],"about_ca_topic_score_codex":0.004936663,"about_ca_topic_score_gemma":0.00049062155,"teacher_disagreement_score":0.018730143,"about_ca_system_score_codex":0.00015127136,"about_ca_system_score_gemma":0.000095610034,"threshold_uncertainty_score":0.74627906},"labels":[],"label_agreement":null},{"id":"W2713930521","doi":"10.1007/978-1-4939-6911-1_8","title":"Bacterial Detection Using Peptide-Based Platform and Impedance Spectroscopy","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Innovates","keywords":"Dielectric spectroscopy; Bacteria; Listeria monocytogenes; Biosensor; Peptide; Antimicrobial; Chemistry; Bacteriocin; Enterococcus faecalis; Electrical impedance; Chromatography; Microbiology; Materials science; Analytical Chemistry (journal); Biochemistry; Biology; Electrode; Staphylococcus aureus; Electrochemistry; Physics","score_opus":0.02598545386226732,"score_gpt":0.3608075583074073,"score_spread":0.33482210444514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2713930521","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46966416,0.000041309966,0.52981925,0.00000880185,0.0002594994,0.000038266993,0.0000011649682,0.000023970168,0.00014361019],"genre_scores_gemma":[0.6266708,0.000012634391,0.37322906,0.000013861141,0.00005609691,0.0000028612733,7.8513784e-7,0.000011598715,0.000002288263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993938,0.000077667275,0.00013865126,0.0001723973,0.00002512247,0.0001923627],"domain_scores_gemma":[0.9996692,0.00003633766,0.000037080288,0.0002114679,0.000010142452,0.000035798766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031845298,0.000107630665,0.00016782274,0.000074268195,0.00008646535,0.00004205328,0.000079185535,0.00016141232,0.000009275229],"category_scores_gemma":[0.00013934108,0.00010426624,0.00003895376,0.00004145841,0.000091394984,0.000040622836,0.00002681965,0.00015736982,0.0000011535033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000151745035,0.0000029216512,0.00025971193,0.000012305573,0.0000071938957,0.0000042909323,0.00000427135,0.0002975787,0.9732112,0.00010757349,2.0908526e-7,0.026077567],"study_design_scores_gemma":[0.00023740304,0.00004766018,0.0012141529,0.000009275628,0.00000831133,0.0000060164834,0.0000023314458,0.21806166,0.7778626,0.002247562,0.00020009028,0.000102913655],"about_ca_topic_score_codex":0.000053366402,"about_ca_topic_score_gemma":0.000033625958,"teacher_disagreement_score":0.21776408,"about_ca_system_score_codex":0.000044850793,"about_ca_system_score_gemma":0.00000568694,"threshold_uncertainty_score":0.42518538},"labels":[],"label_agreement":null},{"id":"W2719966376","doi":"10.1007/978-1-4939-7128-2_20","title":"Genome Editing of C. elegans","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Precursory Research for Embryonic Science and Technology; Japan Science and Technology Agency; University of British Columbia","keywords":"Caenorhabditis elegans; Genome; Biology; Caenorhabditis; Genome editing; Model organism; Computational biology; Genetic screen; Genetics; Evolutionary biology; Gene; Phenotype","score_opus":0.02244306672829433,"score_gpt":0.37264178947631815,"score_spread":0.3501987227480238,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2719966376","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35736862,0.0006974957,0.6396106,0.00014453816,0.00034267147,0.0001309949,0.000010742007,0.0000065751924,0.0016877658],"genre_scores_gemma":[0.5662426,0.00009940098,0.4331262,0.00015482404,0.00017516049,0.00001251827,0.000033159584,0.000027191705,0.00012895965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982972,0.00042749077,0.00036230963,0.00047041007,0.000070880764,0.00037170414],"domain_scores_gemma":[0.9984689,0.000022429898,0.00027751512,0.001081138,0.00008475438,0.00006531268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011008332,0.00019515597,0.00032487122,0.00008662535,0.000113173846,0.00002288715,0.0007428897,0.00031418394,0.000023019229],"category_scores_gemma":[0.00080485095,0.00020136959,0.00012875882,0.00004298969,0.00036046276,0.0000029694363,0.00040128626,0.00016390916,0.0000034430398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013246176,0.000038018537,0.011209067,0.000018231542,0.00003782916,0.000007017458,0.000091630405,0.00009481711,0.9842468,0.00069742877,0.000009059381,0.0035368842],"study_design_scores_gemma":[0.00046770577,0.0002266964,0.012115123,0.000008811474,0.000019557143,0.000013452087,0.000042660475,0.000082267994,0.9758197,0.0035850517,0.007385706,0.00023324651],"about_ca_topic_score_codex":0.00008985306,"about_ca_topic_score_gemma":0.000047676254,"teacher_disagreement_score":0.20887396,"about_ca_system_score_codex":0.000011569498,"about_ca_system_score_gemma":0.000051947507,"threshold_uncertainty_score":0.8211613},"labels":[],"label_agreement":null},{"id":"W27238233","doi":"10.1007/978-1-60761-380-0_27","title":"Identification of Epithelial Stem Cells In Vivo and In Vitro Using Keratin 19 and BrdU","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Keratin; Stem cell; In vitro; Biology; In vivo; Immunoperoxidase; Cell biology; Immunofluorescence; Human skin; Pathology; Molecular biology; Immunology; Biochemistry; Monoclonal antibody; Medicine; Antibody; Genetics","score_opus":0.023560351183947857,"score_gpt":0.3802030461184511,"score_spread":0.3566426949345033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W27238233","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.914122,0.0021980044,0.083281964,0.000056921734,0.000053293308,0.00022836584,0.000013654015,0.0000023465495,0.00004345945],"genre_scores_gemma":[0.929117,0.0004043853,0.07026769,0.0001138894,0.000021108463,0.000011288552,0.000013521476,0.000010658084,0.00004045091],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997487,0.0012908467,0.00042902117,0.00046740193,0.00004697293,0.00027874537],"domain_scores_gemma":[0.99952626,0.000058593483,0.0000939229,0.00024404246,0.000028677281,0.00004848572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001706069,0.00014459316,0.0002884228,0.00023298785,0.000020364381,0.000008720335,0.0001388433,0.0003430229,0.0000030312617],"category_scores_gemma":[0.00013537548,0.00014365667,0.00003717404,0.00020044234,0.00020586782,0.0000028128622,0.00010301928,0.00016610204,2.1421734e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018596914,0.00005462967,0.004148051,0.000015065021,0.000007871215,0.000021113821,0.00005206483,0.000036197573,0.98171896,0.00009496461,0.0000011998798,0.013663924],"study_design_scores_gemma":[0.0007366334,0.00015084623,0.0012345728,0.000009801346,0.000004362047,0.0000344795,0.000056962166,0.0010290802,0.9955901,0.00088898843,0.00012982587,0.0001343578],"about_ca_topic_score_codex":0.000056432502,"about_ca_topic_score_gemma":0.000022972727,"teacher_disagreement_score":0.014995012,"about_ca_system_score_codex":0.000019163086,"about_ca_system_score_gemma":0.00005045124,"threshold_uncertainty_score":0.5858149},"labels":[],"label_agreement":null},{"id":"W2724303689","doi":"10.1007/978-1-4939-7033-9_11","title":"In Vivo and In Vitro Protein–Peptidoglycan Interactions","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Peptidoglycan; Cell envelope; In vitro; Bacteria; Bacterial cell structure; In vivo; Lysis; Organelle; Cell biology; Biology; Cell wall; Microbiology; Chemistry; Biochemistry; Genetics; Escherichia coli; Gene","score_opus":0.02761268571823182,"score_gpt":0.433368330196753,"score_spread":0.4057556444785212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2724303689","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93785816,0.0004055796,0.056281473,0.0011673362,0.00013940308,0.0006454219,0.000011370429,0.0000057585185,0.0034854652],"genre_scores_gemma":[0.8023379,0.000056070494,0.19622204,0.00022492431,0.000045746947,0.00021046831,0.0000145146605,0.000020091225,0.0008682674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981329,0.00070254994,0.00027732458,0.00047848863,0.00005741938,0.0003513206],"domain_scores_gemma":[0.9992149,0.000027229966,0.000088079956,0.0005697116,0.000034983983,0.00006510116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088821584,0.00015289622,0.00022572701,0.00026873683,0.00006942098,0.000038784758,0.0003156621,0.00021882169,0.00004765716],"category_scores_gemma":[0.0010323493,0.00015412278,0.000046874684,0.00010291431,0.00021470264,0.000009056947,0.00032870827,0.00029972132,0.000003111972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021018121,0.000054908665,0.0036472846,0.000010633694,0.0000076077417,0.000039921742,0.000030980715,0.000008940874,0.986765,0.00031478086,0.000013659457,0.008896085],"study_design_scores_gemma":[0.00094974483,0.00009359394,0.0025185456,0.000018374058,0.0000013656247,0.000016554428,0.00003329036,0.00029267615,0.9756295,0.0020608976,0.018216204,0.0001692278],"about_ca_topic_score_codex":0.0004899864,"about_ca_topic_score_gemma":0.0010585902,"teacher_disagreement_score":0.13994056,"about_ca_system_score_codex":0.00003264863,"about_ca_system_score_gemma":0.000056189754,"threshold_uncertainty_score":0.62849444},"labels":[],"label_agreement":null},{"id":"W2726906479","doi":"10.1007/978-1-4939-6996-8_20","title":"Incorporation of Artificial Lipid-Anchored Proteins into Cultured Mammalian Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Cell biology; Function (biology); Chemistry; Lipid droplet; Cell; Membrane protein; Biochemistry; Membrane; Biology","score_opus":0.05184617906164693,"score_gpt":0.45348364599705965,"score_spread":0.4016374669354127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2726906479","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44621405,0.00038436602,0.5446371,0.0038871737,0.0004976351,0.0011630101,0.000018137554,0.000021392123,0.0031771625],"genre_scores_gemma":[0.10260841,0.000034487763,0.89631885,0.00016771974,0.00018625947,0.000051572046,0.000043488286,0.000015060657,0.00057416706],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836886,0.00056985044,0.0003760167,0.00030297486,0.00013263685,0.00024963677],"domain_scores_gemma":[0.9990084,0.00005550023,0.00020894883,0.0005037528,0.00013243905,0.000090970396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010167216,0.00013913483,0.00040943103,0.00014774904,0.00010693679,0.000016167509,0.00026189227,0.00023131151,0.00006376176],"category_scores_gemma":[0.0006997949,0.000107676664,0.000119030425,0.00010366792,0.0004145948,0.000029933733,0.00016412657,0.0002647046,0.000011870731],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033770263,0.000097117954,0.0057302015,0.00008233648,0.00003123539,0.00005048762,0.00013544317,0.000002755199,0.93255204,0.005101951,0.000038691775,0.05584001],"study_design_scores_gemma":[0.000424771,0.00041987968,0.0050414237,0.00003892783,0.000017461063,0.000008377031,0.00002690526,0.00026674903,0.97144866,0.015578711,0.006619135,0.00010898217],"about_ca_topic_score_codex":0.0007435619,"about_ca_topic_score_gemma":0.000121312885,"teacher_disagreement_score":0.35168177,"about_ca_system_score_codex":0.00003217146,"about_ca_system_score_gemma":0.000089400535,"threshold_uncertainty_score":0.43909267},"labels":[],"label_agreement":null},{"id":"W2727952875","doi":"10.1007/978-1-61779-827-6_8","title":"Fourier Transform Infrared Spectroscopy for Molecular Analysis of Microbial Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; The Scarborough Hospital","funders":"","keywords":"Fourier transform infrared spectroscopy; Infrared; Fourier transform; Fourier transform spectroscopy; Infrared spectroscopy; Spectroscopy; Materials science; Analytical Chemistry (journal); Chemistry; Physics; Optics; Environmental chemistry; Organic chemistry; Astronomy","score_opus":0.015586745125831941,"score_gpt":0.4241593558317131,"score_spread":0.40857261070588113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2727952875","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07822133,0.001061496,0.9174683,0.000113545444,0.00014088121,0.0004302638,0.000082361395,0.000014712536,0.0024671264],"genre_scores_gemma":[0.028802255,0.00015872739,0.96980304,0.00040984328,0.00008775111,0.00016447762,0.00029861263,0.000036326677,0.00023897103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769676,0.0003861535,0.0005176354,0.00047986882,0.00014018187,0.0007794251],"domain_scores_gemma":[0.99895334,0.00011510951,0.000112927824,0.0005470132,0.000093342846,0.00017826956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014827795,0.00025093736,0.0005640983,0.0003767187,0.000029270723,0.000007273032,0.0004743518,0.0005553819,0.00008822121],"category_scores_gemma":[0.0004236232,0.00023149008,0.00049000396,0.0007919469,0.0003840143,0.0000037596558,0.00015642958,0.00022094396,9.466599e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020406049,0.00018638938,0.00059240643,0.000031630178,0.0004592941,0.0000015841192,0.000025568514,0.0000054225393,0.9940003,0.0016846326,0.00037418114,0.0024345275],"study_design_scores_gemma":[0.00049746706,0.00039632368,0.000040315284,0.0000064646442,0.00020136355,0.0000020483208,0.0000113747865,0.00015357738,0.95693976,0.003901876,0.037612367,0.00023705789],"about_ca_topic_score_codex":0.00001608475,"about_ca_topic_score_gemma":0.0000032616392,"teacher_disagreement_score":0.05233475,"about_ca_system_score_codex":0.0000456254,"about_ca_system_score_gemma":0.00006474544,"threshold_uncertainty_score":0.9439891},"labels":[],"label_agreement":null},{"id":"W2730319175","doi":"10.1007/978-1-4939-7057-5_19","title":"Antibody Colocalization Microarray for Cross-Reactivity-Free Multiplexed Protein Analysis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University; McGill University and Génome Québec Innovation Centre","funders":"National Research Council Canada; Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Colocalization; Antibody; Reagent; Protein microarray; Antibody microarray; Computational biology; Microarray; Chemistry; Computer science; Molecular biology; Biology; Immunology; Biochemistry","score_opus":0.02412498473509761,"score_gpt":0.46626189425542064,"score_spread":0.44213690952032303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2730319175","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11370715,0.00008855129,0.88491714,0.00021717323,0.00004891218,0.0007333786,0.000062805535,0.000025423129,0.00019945033],"genre_scores_gemma":[0.21209301,0.000016801381,0.7867415,0.00012272524,0.00004647764,0.00022053016,0.0005680775,0.000023693106,0.00016721037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847156,0.00026058618,0.0002863746,0.0006321477,0.000043194774,0.00030612032],"domain_scores_gemma":[0.99800885,0.000038355003,0.00027871493,0.0014829017,0.00014231325,0.000048873375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080883113,0.00019239476,0.00030764757,0.00012323399,0.00026598407,0.00005480953,0.00060184614,0.0003613493,0.0000026041791],"category_scores_gemma":[0.0015137192,0.00019027722,0.00021378149,0.0001538572,0.00032200883,0.000005359756,0.0002984326,0.00010369573,5.2974946e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073404495,0.0000662717,0.0055435067,0.000008921539,0.00009729062,0.0000013020756,0.000005165133,0.000070834925,0.9872499,0.0018091185,0.000012134106,0.00506212],"study_design_scores_gemma":[0.00063631596,0.000141385,0.002242712,0.000005975205,0.000059284,0.000002276763,0.000003822504,0.0009519826,0.96198165,0.008940479,0.024799515,0.00023458811],"about_ca_topic_score_codex":0.00006271991,"about_ca_topic_score_gemma":0.00008030428,"teacher_disagreement_score":0.09838586,"about_ca_system_score_codex":0.000022243297,"about_ca_system_score_gemma":0.000034760065,"threshold_uncertainty_score":0.77592796},"labels":[],"label_agreement":null},{"id":"W2732171790","doi":"10.1007/978-1-4939-6996-8_2","title":"Lipid Extraction Techniques for Stable Isotope Analysis and Ecological Assays","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Isotope Analysis in Ecology","field":"Environmental Science","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; McGill University","funders":"","keywords":"Stable isotope ratio; Isotope; Extraction (chemistry); Isotopes of carbon; Isotope analysis; Chemistry; Distillation; Polar; δ13C; Environmental chemistry; Lipid metabolism; Chromatography; Ecology; Biochemistry; Biology; Total organic carbon","score_opus":0.023567066341349405,"score_gpt":0.40240328974845446,"score_spread":0.37883622340710504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2732171790","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06973455,0.000027817849,0.923484,0.0004232231,0.00008669692,0.0003346895,0.0000038169183,0.000024321625,0.0058808336],"genre_scores_gemma":[0.1325549,0.00005390581,0.86660475,0.000341245,0.000021216327,0.00020803814,0.00000812224,0.000009198452,0.00019864428],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.998048,0.0007598395,0.0002733411,0.00053161976,0.00005167167,0.0003355069],"domain_scores_gemma":[0.9988807,0.0002926911,0.00020834999,0.0005571633,0.000012675645,0.000048413996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002651785,0.00013947127,0.0004100914,0.00015493926,0.000227687,0.00003921742,0.00039976233,0.00029461144,0.0007216252],"category_scores_gemma":[0.0008792028,0.0001224817,0.00013214274,0.00019176818,0.00040595417,0.00009037617,0.00040502194,0.0001624825,0.000008950851],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018334558,0.000085948835,0.4110935,0.0000028458091,0.00013217704,0.000010874016,0.00002399142,0.000067372006,0.44926888,0.0012551564,0.000066146036,0.13797477],"study_design_scores_gemma":[0.0005701303,0.00059345266,0.4935406,0.000002404541,0.00060150056,0.000015491276,0.000070182534,0.00708783,0.4100973,0.035739083,0.051124893,0.00055711676],"about_ca_topic_score_codex":0.0003374084,"about_ca_topic_score_gemma":0.0011150645,"teacher_disagreement_score":0.13741764,"about_ca_system_score_codex":0.00010259397,"about_ca_system_score_gemma":0.000007118132,"threshold_uncertainty_score":0.790129},"labels":[],"label_agreement":null},{"id":"W2732372826","doi":"10.1007/978-1-4939-7033-9_10","title":"Defining Membrane Protein Topology Using pho-lac Reporter Fusions","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut national de la recherche scientifique","keywords":"Periplasmic space; lac operon; Reporter gene; Cytoplasm; Fusion protein; Escherichia coli; Beta-galactosidase; Topology (electrical circuits); Biology; Molecular biology; Cell biology; Biochemistry; Gene; Gene expression","score_opus":0.028313689458862378,"score_gpt":0.38852352558201614,"score_spread":0.36020983612315377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2732372826","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78751147,0.0007513181,0.20859028,0.0007512108,0.0006827907,0.0003965081,0.00001576955,0.000023091023,0.0012775573],"genre_scores_gemma":[0.3817885,0.000084008054,0.61731565,0.00032659966,0.0001281744,0.000055589044,0.000056034834,0.00004355838,0.00020192306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99730736,0.0006362458,0.0005287815,0.0008486384,0.000064149615,0.0006148092],"domain_scores_gemma":[0.99789196,0.000020847105,0.000392788,0.0015248662,0.000080258214,0.00008929468],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011411097,0.00030611546,0.00045389653,0.00015752982,0.00027817898,0.00004772909,0.0007449645,0.00102137,0.00005380643],"category_scores_gemma":[0.001114156,0.000292605,0.00015716498,0.000088377325,0.0006060855,0.0000039570264,0.00090479304,0.00028426942,0.00000502926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006570692,0.000048101476,0.0018079145,0.000010387487,0.000049153652,0.000056363708,0.000010549248,0.000011861125,0.9845753,0.0035585305,0.000010080731,0.009796097],"study_design_scores_gemma":[0.0006222313,0.00032422956,0.00050636736,0.000018194312,0.000023333445,0.00013805395,0.000019663115,0.00014039823,0.9749057,0.0035115934,0.01943433,0.00035587186],"about_ca_topic_score_codex":0.00022251646,"about_ca_topic_score_gemma":0.00012077914,"teacher_disagreement_score":0.40872532,"about_ca_system_score_codex":0.000023637424,"about_ca_system_score_gemma":0.000117927666,"threshold_uncertainty_score":0.9999526},"labels":[],"label_agreement":null},{"id":"W2732687538","doi":"10.1007/978-1-4939-7057-5_14","title":"High-Throughput Quantitative Lipidomics Analysis of Nonesterified Fatty Acids in Plasma by LC-MS","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Lipidomics; Polyunsaturated fatty acid; Chemistry; Fatty acid; Chromatography; Mass spectrometry; Biochemistry","score_opus":0.03229201485572521,"score_gpt":0.4161970607859361,"score_spread":0.3839050459302109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2732687538","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3919053,0.00006500982,0.60475343,0.00014265899,0.000030454612,0.00007999166,0.00008439725,0.000020786958,0.0029179477],"genre_scores_gemma":[0.34521428,0.00007211621,0.6544532,0.000030213967,0.000007884031,0.00007801846,0.00008666002,0.0000127058265,0.00004488273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848044,0.0002460759,0.00048779725,0.0004589133,0.00006390779,0.0002628582],"domain_scores_gemma":[0.9982817,0.00026062175,0.00037994832,0.0009979118,0.000042139407,0.000037672304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007125014,0.00017969358,0.00067061785,0.00028606685,0.00005651318,0.000019759991,0.0006208766,0.0003276587,0.0003130669],"category_scores_gemma":[0.00042285814,0.00017858155,0.00015550153,0.00045657065,0.00026049095,0.00003178942,0.00020544423,0.00026667863,0.0000012906065],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003305859,0.000101731835,0.028703984,0.00001765304,0.00018244593,0.000003814556,0.000054257198,0.000042133295,0.9229941,0.045687933,0.0000083537825,0.002170555],"study_design_scores_gemma":[0.0004835714,0.000051480314,0.004365558,0.000012681664,0.00012412522,9.0488106e-7,0.00004400348,0.0029552209,0.97796965,0.012848687,0.00093656447,0.00020758295],"about_ca_topic_score_codex":0.00072676333,"about_ca_topic_score_gemma":0.00012662495,"teacher_disagreement_score":0.05497554,"about_ca_system_score_codex":0.00006439309,"about_ca_system_score_gemma":0.00002040996,"threshold_uncertainty_score":0.7282344},"labels":[],"label_agreement":null},{"id":"W2734917389","doi":"10.1007/978-1-4939-6993-7_27","title":"Purification of DNA Damage-Dependent PARPs from E. coli for Structural and Biochemical Analysis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":42,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"DNA damage; Poly ADP ribose polymerase; DNA; DNA repair; Biology; PARP inhibitor; Enzyme; Computational biology; Cell biology; Chemistry; Biochemistry; Polymerase","score_opus":0.04512648050012863,"score_gpt":0.455292882847519,"score_spread":0.4101664023473904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2734917389","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5835935,0.0005617357,0.41508523,0.00036373688,0.00006922355,0.00020810888,0.000055184184,0.000006004449,0.000057329697],"genre_scores_gemma":[0.5056928,0.000051131454,0.4939658,0.00011329082,0.000031040392,0.00004731962,0.00008137277,0.00000720787,0.000010062938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99895424,0.00026180368,0.00027871414,0.00031231146,0.000057647114,0.00013529105],"domain_scores_gemma":[0.99893844,0.00017317818,0.00021508551,0.00055109634,0.0000730213,0.000049202445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005427421,0.00009905549,0.00041116378,0.00014242048,0.000047835994,0.000009871652,0.00013800547,0.00017432019,0.000036159254],"category_scores_gemma":[0.00041563768,0.00008887513,0.00010299824,0.000085509986,0.00027734248,0.000017299677,0.00004682557,0.0000968444,2.7646595e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019064096,0.000016314234,0.01792561,0.000014653575,0.00026776464,0.0000021454123,0.000055724948,0.0000033630683,0.9741702,0.0008613925,0.000009929754,0.006482264],"study_design_scores_gemma":[0.0015316854,0.000093140334,0.0498673,0.0000130441185,0.00027629954,0.0000017235474,0.000022128701,0.0010277267,0.93247825,0.014378432,0.00022676101,0.000083530875],"about_ca_topic_score_codex":0.00013527232,"about_ca_topic_score_gemma":0.000009894306,"teacher_disagreement_score":0.078880586,"about_ca_system_score_codex":0.00003529864,"about_ca_system_score_gemma":0.000028659382,"threshold_uncertainty_score":0.36242226},"labels":[],"label_agreement":null},{"id":"W2735335346","doi":"10.1007/978-1-4939-7187-9_4","title":"Ultrasound Imaging of Apoptosis: Spectroscopic Detection of DNA-Damage Effects In Vivo","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; University of Toronto; Hamilton Health Sciences; Health Sciences Centre; Juravinski Cancer Centre; Sunnybrook Health Science Centre","funders":"","keywords":"Ultrasound; In vivo; Medicine; Personalized medicine; Programmed cell death; Cancer; Radiology; Biomedical engineering; Apoptosis; Internal medicine; Bioinformatics; Chemistry; Biology","score_opus":0.010561131966987717,"score_gpt":0.4030833787808927,"score_spread":0.39252224681390496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735335346","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6331457,0.00041747006,0.3644272,0.000042210693,0.000101866135,0.00018485547,0.0000039830165,0.0000060112807,0.0016707217],"genre_scores_gemma":[0.8142448,0.0001674358,0.18539435,0.000048917853,0.0000334919,0.000048568276,0.0000066978732,0.00001591059,0.000039829734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982678,0.00046977986,0.00037781062,0.00041318347,0.000110665256,0.00036072763],"domain_scores_gemma":[0.9988498,0.0001343481,0.00019473993,0.0007116573,0.00005130037,0.000058122394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010437926,0.00016243578,0.00035853017,0.00016749169,0.000036397083,0.0000094003335,0.0005962704,0.00028186757,0.000020647809],"category_scores_gemma":[0.0025368968,0.00015180395,0.0001088594,0.00013665577,0.00066780235,0.000003925574,0.0002931391,0.00023828336,4.0556833e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007222005,0.00008970443,0.016747428,0.00007951698,0.00001787801,0.000004462131,0.000010111008,4.2035379e-7,0.9797699,0.00038918565,0.000012608163,0.0028065727],"study_design_scores_gemma":[0.0005065934,0.0002947198,0.0038369347,0.000059878075,0.000007617366,0.0000039578526,0.000010188594,0.000031784624,0.98660517,0.008187443,0.00032661387,0.00012909899],"about_ca_topic_score_codex":0.00013323716,"about_ca_topic_score_gemma":0.000018399396,"teacher_disagreement_score":0.18109913,"about_ca_system_score_codex":0.00003498977,"about_ca_system_score_gemma":0.000041839863,"threshold_uncertainty_score":0.6190386},"labels":[],"label_agreement":null},{"id":"W2735646170","doi":"10.1007/7651_2017_47","title":"Use of a Super-hydrophobic Microbioreactor to Generate and Boost Pancreatic Mini-organoids","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Carraresi Foundation","keywords":"Organoid; Coalescence (physics); Nanotechnology; Drop (telecommunication); Materials science; Chemistry; Computer science; Cell biology; Biology","score_opus":0.047718802828228,"score_gpt":0.39250710128564137,"score_spread":0.3447882984574134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735646170","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8114248,0.00024568097,0.18775664,0.00011016066,0.00015134508,0.00015966604,0.000009551002,0.000023524912,0.000118658216],"genre_scores_gemma":[0.3262896,0.00008427985,0.6734194,0.000067103305,0.000019219959,0.000019285919,0.000004093905,0.000028140525,0.00006885799],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986713,0.0003700323,0.0002679257,0.0002717308,0.0000646681,0.00035437188],"domain_scores_gemma":[0.99890506,0.0003028753,0.000034770997,0.0005947204,0.000037299844,0.00012528266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089270127,0.00014908615,0.00033908524,0.00020072328,0.000035693432,0.00004145044,0.0003585391,0.00020150222,0.000035056863],"category_scores_gemma":[0.0019277962,0.00013752718,0.000039828785,0.00012180984,0.00028348973,0.00003089966,0.00030868413,0.00021350928,0.000007950873],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008246805,0.000011248128,0.0068885563,0.00004840661,0.000030460526,0.000020277328,0.00006883684,0.000019718555,0.9800352,0.00012671902,0.000039278882,0.012703062],"study_design_scores_gemma":[0.00020594968,0.00007845822,0.008892312,0.00003926157,0.00001000052,0.000009189472,0.0000039576657,0.0020079925,0.9837943,0.0002318689,0.004570715,0.00015602315],"about_ca_topic_score_codex":0.00019726627,"about_ca_topic_score_gemma":0.0000093791305,"teacher_disagreement_score":0.48566276,"about_ca_system_score_codex":0.00003536358,"about_ca_system_score_gemma":0.000022324683,"threshold_uncertainty_score":0.56081957},"labels":[],"label_agreement":null},{"id":"W2735761755","doi":"10.1007/978-1-4939-7187-9_3","title":"Ultrasound Imaging of DNA-Damage Effects in Live Cultured Cells and in Brain Tissue","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spectroscopy Techniques in Biomedical and Chemical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; University of Toronto; Hamilton Health Sciences; Juravinski Cancer Centre; Sunnybrook Health Science Centre; Health Sciences Centre","funders":"","keywords":"Ultrasound; Ex vivo; In vivo; Biomedical engineering; Focused ultrasound; High frequency ultrasound; Programmed cell death; Medicine; Apoptosis; Pathology; Radiology; Chemistry; Biology","score_opus":0.010081928557664719,"score_gpt":0.42549129133711,"score_spread":0.4154093627794453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2735761755","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8577618,0.0014552498,0.13855462,0.00039273093,0.00009337425,0.0003903916,0.000010009652,0.000007759089,0.0013340742],"genre_scores_gemma":[0.54975754,0.00038683956,0.4492642,0.00032094633,0.000037586615,0.00006892621,0.000030015435,0.000021893065,0.00011206912],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981255,0.00062915334,0.0002948432,0.00048323462,0.00008018458,0.00038710193],"domain_scores_gemma":[0.999066,0.00023473149,0.000099452984,0.0004968489,0.000028733255,0.000074223906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012306377,0.00017005824,0.00032951366,0.00013157119,0.000030644427,0.000017066108,0.0004796545,0.00033261153,0.000012552081],"category_scores_gemma":[0.0027795704,0.0001530209,0.00004601143,0.00010429984,0.0006709601,0.000003912049,0.000399094,0.00029510944,7.0791464e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006217512,0.00006949602,0.015813598,0.0000520292,0.000007990024,0.00005191794,0.0000434139,4.980186e-7,0.9795009,0.00021174828,0.00007837675,0.004107866],"study_design_scores_gemma":[0.0006343514,0.00015719686,0.0059274784,0.00005645872,0.0000029104697,0.000009318866,0.000021030115,0.000034806133,0.98442054,0.007171578,0.0014080682,0.00015628025],"about_ca_topic_score_codex":0.00017978228,"about_ca_topic_score_gemma":0.000072527306,"teacher_disagreement_score":0.3107096,"about_ca_system_score_codex":0.000027596208,"about_ca_system_score_gemma":0.000032896256,"threshold_uncertainty_score":0.6240011},"labels":[],"label_agreement":null},{"id":"W2736074435","doi":"10.1007/978-1-59259-179-4_1","title":"Labeling DNA Damage with Terminal Transferase","year":2002,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Terminal deoxynucleotidyl transferase; Terminal (telecommunication); Chemistry; Computational biology; Molecular biology; Computer science; Biology; Genetics; Computer network; TUNEL assay","score_opus":0.01862146673153543,"score_gpt":0.3358253577500267,"score_spread":0.3172038910184913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2736074435","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43253186,0.00056363444,0.56486714,0.00011074357,0.00009644093,0.00019351901,0.00000748218,0.000025347164,0.001603844],"genre_scores_gemma":[0.20273173,0.00006528852,0.79589236,0.0007388614,0.00006452616,0.000066397166,0.00004248349,0.00005217286,0.00034619155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977798,0.0007924702,0.00027519386,0.0006234563,0.0000785889,0.00045052194],"domain_scores_gemma":[0.99921113,0.000043729757,0.000054054763,0.00055473787,0.000043540873,0.000092816335],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064988766,0.00025504114,0.00027531086,0.00011951176,0.00004597801,0.00001416118,0.00031138913,0.0003033708,0.00010758707],"category_scores_gemma":[0.00019447142,0.00022628934,0.000095769894,0.00019870442,0.00014544306,0.0000029918954,0.00008897025,0.00020248695,0.000009868933],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050535567,0.000080717866,0.0005743796,0.000011740484,0.00003820584,0.00013511568,0.000047694717,0.000039290964,0.98638695,0.00066660024,0.000022239912,0.011946505],"study_design_scores_gemma":[0.00091612485,0.0007315305,0.000066558634,0.00001541016,0.000023545106,0.00012081564,0.000033378485,0.00055879715,0.9901475,0.00070889154,0.0063510924,0.0003264091],"about_ca_topic_score_codex":0.000011031649,"about_ca_topic_score_gemma":0.000021360176,"teacher_disagreement_score":0.23102522,"about_ca_system_score_codex":0.000016978987,"about_ca_system_score_gemma":0.000022495016,"threshold_uncertainty_score":0.92278117},"labels":[],"label_agreement":null},{"id":"W27361888","doi":"10.1007/978-1-61779-270-0_1","title":"Approaches to Detect PARP-1 Activation In Vivo, In Situ, and In Vitro","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Sherbrooke; Terry Fox Research Institute; University of British Columbia; Université de Montréal; Université Laval; Centre hospitalier de l'Université Laval","funders":"RIKEN; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; Health Canada","keywords":"Poly ADP ribose polymerase; NAD+ kinase; Gene knockdown; DNA damage; Nicotinamide adenine dinucleotide; DNA repair; Cell biology; Oligonucleotide; In vivo; Chemistry; DNA; Biology; Polymerase; Molecular biology; Biochemistry; Enzyme; Gene; Genetics","score_opus":0.15763001757388703,"score_gpt":0.40723137166093304,"score_spread":0.249601354087046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W27361888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6814781,0.00021415105,0.31604174,0.00031803155,0.000047534908,0.0004275316,0.0000011610275,0.000010560113,0.0014612492],"genre_scores_gemma":[0.5372376,0.000019236484,0.46192095,0.00063712546,0.000010666326,0.00015382092,0.0000029143928,0.000011093325,0.000006598304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798834,0.0010107778,0.00032560737,0.0003674329,0.000048389942,0.0002594338],"domain_scores_gemma":[0.99953645,0.00014534996,0.000049086484,0.00020951364,0.000010110884,0.000049508402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013569467,0.0001311779,0.00035413977,0.00062035787,0.0000068287973,0.0000024887581,0.000071016635,0.0002105556,0.000025069721],"category_scores_gemma":[0.00031703466,0.00012753347,0.000026368121,0.0005237301,0.00007227922,0.000026807777,0.000045129742,0.0002767683,0.0000013633256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007662435,0.00006442205,0.011304664,0.000017647246,0.000006286531,0.000028350501,0.0008872546,0.000010222778,0.9498712,0.0002156882,0.0000016078761,0.036826424],"study_design_scores_gemma":[0.0017474523,0.00015352065,0.021658536,0.000058657854,0.0000028776262,0.000008934888,0.00010031762,0.00009561197,0.9658262,0.010005711,0.00022175057,0.000120426885],"about_ca_topic_score_codex":0.00027840794,"about_ca_topic_score_gemma":0.00019850521,"teacher_disagreement_score":0.14587924,"about_ca_system_score_codex":0.00015820393,"about_ca_system_score_gemma":0.000039001134,"threshold_uncertainty_score":0.5200664},"labels":[],"label_agreement":null},{"id":"W2738310092","doi":"10.1007/978-1-4939-7136-7_11","title":"Phosphoproteomics Analysis for Probing Plant Stress Tolerance","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Phosphoproteomics; Phosphorylation; Cell biology; Protein phosphorylation; Abiotic stress; Biology; Computational biology; Chemistry; Protein kinase A; Biochemistry","score_opus":0.029772155898706257,"score_gpt":0.4105673476249718,"score_spread":0.3807951917262656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2738310092","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.032900933,0.00012237925,0.9655042,0.00013257824,0.000024132029,0.00029221873,0.00015722151,0.00004325157,0.00082304154],"genre_scores_gemma":[0.039705127,0.00004137667,0.9590091,0.000056903693,0.000028188215,0.0009635226,0.000087977074,0.000018091507,0.00008973125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999027,0.000039687697,0.0002493719,0.0004009326,0.000028822747,0.00025416174],"domain_scores_gemma":[0.9987469,0.000085472966,0.00024348291,0.00085194735,0.000037392987,0.000034805766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038494891,0.00013611428,0.00031097108,0.000064651955,0.00018033075,0.000031685133,0.00053233514,0.00019453873,0.000023804052],"category_scores_gemma":[0.00021562292,0.0001352265,0.00014570662,0.00008222378,0.0001048378,0.000025463634,0.00013267362,0.0001745034,4.3915094e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027610951,0.000030211124,0.009362353,0.00003044893,0.0000781735,0.0000025475601,0.000025383488,0.0005332571,0.96343195,0.015350192,0.0000018794367,0.011125975],"study_design_scores_gemma":[0.00022653135,0.00001119747,0.00008170172,0.000015675521,0.000050381812,0.0000012733457,0.000009501022,0.006430871,0.95069283,0.040339176,0.001977923,0.00016296284],"about_ca_topic_score_codex":0.00006714714,"about_ca_topic_score_gemma":0.00002303301,"teacher_disagreement_score":0.024988983,"about_ca_system_score_codex":0.000040690316,"about_ca_system_score_gemma":0.000017978131,"threshold_uncertainty_score":0.5514377},"labels":[],"label_agreement":null},{"id":"W27388708","doi":"10.1007/978-1-62703-281-0_19","title":"Applications of Array-CGH for Lung Cancer","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lung Cancer Diagnosis and Treatment","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; BC Cancer Agency; Toronto General Hospital; University of British Columbia; University Health Network","funders":"","keywords":"Lung cancer; Medicine; Computer science; Oncology","score_opus":0.060864638501069816,"score_gpt":0.5372211985563808,"score_spread":0.476356560055311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W27388708","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[2.0462207e-7,0.57174045,0.42528763,0.00006381656,0.00009256641,0.0025381753,0.000055673197,0.0000069009952,0.00021460027],"genre_scores_gemma":[1.02409395e-7,0.5668919,0.41909736,0.00006402947,0.000055916527,0.013666287,0.00011056831,0.000026396849,0.000087441214],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99836195,0.0003729065,0.0005490849,0.00043816277,0.000046297686,0.00023159945],"domain_scores_gemma":[0.99863684,0.0004319174,0.00029392404,0.00049061514,0.0000872455,0.00005946797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038734722,0.00025955634,0.0017873388,0.0002065538,0.000015422269,0.0000029627456,0.00014497958,0.00038458983,0.00009094492],"category_scores_gemma":[0.000089731395,0.00018343827,0.00048448352,0.00026017672,0.000079150836,0.0000056142776,0.000035693374,0.00017250996,0.0000020992265],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003844759,0.00010812232,0.000106386375,0.013473309,0.00054815057,0.000001505448,0.0000094612415,3.2479443e-7,0.00030464903,0.00153637,0.00017319672,0.98373467],"study_design_scores_gemma":[0.00043508917,0.00011698032,0.0000023349603,0.0033262041,0.0020436519,0.0000074122318,0.0000022012323,0.000006062802,0.0012771853,0.0005688079,0.9920668,0.00014726228],"about_ca_topic_score_codex":0.0001356347,"about_ca_topic_score_gemma":0.0000067570168,"teacher_disagreement_score":0.9918936,"about_ca_system_score_codex":0.00028499443,"about_ca_system_score_gemma":0.00030715758,"threshold_uncertainty_score":0.7480396},"labels":[],"label_agreement":null},{"id":"W2741680464","doi":"10.1007/978-1-4939-7151-0_18","title":"Solid-State NMR of Membrane Protein Reconstituted in Proteoliposomes, the Case of TSPO","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced NMR Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Membrane; Recombinant DNA; Solid-state nuclear magnetic resonance; Chemistry; Membrane protein; Bacterial outer membrane; Crystallography; Biophysics; Inner membrane; Integral membrane protein; Biochemistry; Biology; Escherichia coli; Nuclear magnetic resonance; Physics","score_opus":0.030342254261630498,"score_gpt":0.4421809263832957,"score_spread":0.4118386721216652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2741680464","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47561014,0.00019120848,0.5201068,0.00034408117,0.000010568906,0.0006816287,0.00004132488,0.000023375966,0.0029908954],"genre_scores_gemma":[0.37173486,0.00003056557,0.62771684,0.000018736515,0.000006640884,0.00040102753,0.0000051041648,0.000011148748,0.000075042066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892145,0.00020431576,0.00041655186,0.00024270624,0.000029239454,0.0001857285],"domain_scores_gemma":[0.998559,0.00009433677,0.0003574608,0.0009188769,0.00004804265,0.000022262508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073748216,0.00011674427,0.00031106046,0.000065059685,0.000057499423,0.0000047645867,0.00044233468,0.00015266717,0.00003630401],"category_scores_gemma":[0.0005699085,0.00009015028,0.00006180624,0.000098691184,0.000495469,0.000023433468,0.00015431688,0.00025294235,3.818943e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022733151,0.000050700386,0.00022877564,0.00007035026,0.000011307885,0.00008672658,0.000048138827,0.00007876325,0.9649968,0.010104772,7.4642327e-7,0.02430018],"study_design_scores_gemma":[0.0002818028,0.000019902562,0.000019871222,0.0000609361,0.0000055695673,0.00006962521,0.000028801483,0.00044390498,0.94864404,0.049623646,0.00071325724,0.00008862892],"about_ca_topic_score_codex":0.00057834876,"about_ca_topic_score_gemma":0.00014671129,"teacher_disagreement_score":0.1076101,"about_ca_system_score_codex":0.000021216014,"about_ca_system_score_gemma":0.000044052627,"threshold_uncertainty_score":0.36762217},"labels":[],"label_agreement":null},{"id":"W2742216177","doi":"10.1007/978-1-4939-7219-7_12","title":"Analysis of Epidermal Growth Factor Receptor-Induced Cell Motility by Wound Healing Assay","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Wound healing; Cell biology; Motility; Cell migration; Cell; Chemistry; Cell culture; Cell growth; Biology; Immunology; Biochemistry; Genetics","score_opus":0.06943061057597652,"score_gpt":0.45566836034615016,"score_spread":0.38623774977017367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742216177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6395096,0.0002990888,0.35787416,0.00047143915,0.00010437872,0.00031361714,0.000036126905,0.00001571729,0.001375843],"genre_scores_gemma":[0.71327174,0.000060706596,0.2861567,0.00019139738,0.000019131765,0.000018975248,0.000082437706,0.000026341037,0.00017252722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99473405,0.0030869555,0.0006677146,0.0006986405,0.0002674756,0.0005451518],"domain_scores_gemma":[0.99716055,0.0007196121,0.00034546576,0.0013260789,0.0002312285,0.00021704493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036052403,0.00024315379,0.0010929476,0.0006134178,0.00011080228,0.000023270766,0.00052914943,0.000427113,0.0004053605],"category_scores_gemma":[0.005310646,0.0002189372,0.00039595374,0.0005345303,0.0003067241,0.000035145928,0.0003338462,0.00059674156,0.000008604905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008000935,0.00016140305,0.13638783,0.00006269381,0.00029700648,0.000027747727,0.000050975777,0.0000034142345,0.8518124,0.00005474734,0.00002767153,0.011034111],"study_design_scores_gemma":[0.00082730834,0.00024448262,0.062946305,0.000014088178,0.00022163973,0.0000022926922,0.000027972372,0.0016586703,0.9332124,0.00026846136,0.0004209068,0.00015547566],"about_ca_topic_score_codex":0.0009168163,"about_ca_topic_score_gemma":0.000021890974,"teacher_disagreement_score":0.08140001,"about_ca_system_score_codex":0.00012870085,"about_ca_system_score_gemma":0.00012010849,"threshold_uncertainty_score":0.89280003},"labels":[],"label_agreement":null},{"id":"W2742539909","doi":"10.1007/978-1-4939-7219-7_6","title":"Dimerization Assessment of Epithelial Growth Factor Family of Receptor Tyrosine Kinases by Using Cross-Linking Reagent","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Receptor tyrosine kinase; Tyrosine kinase; Kinase; Reagent; Cell biology; Chemistry; Receptor; Cancer research; Biochemistry; Biology; Organic chemistry","score_opus":0.1107430438792326,"score_gpt":0.5423649582831309,"score_spread":0.4316219144038983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742539909","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5446489,0.0004003225,0.453994,0.00007488551,0.0002615269,0.00028621525,0.00007263081,0.000007469603,0.00025406],"genre_scores_gemma":[0.43378377,0.00020737361,0.5657769,0.00006549848,0.000048067086,0.00001630443,0.000048919403,0.00002758738,0.000025585998],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99753,0.00097263046,0.0005730456,0.00037364595,0.00024351173,0.0003071598],"domain_scores_gemma":[0.9983964,0.00019962434,0.00041919804,0.0006343012,0.00027593542,0.000074517746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016368798,0.00016160382,0.00058128394,0.00018511432,0.00007680334,0.000017759434,0.0003141747,0.00023556771,0.000086787935],"category_scores_gemma":[0.0018880919,0.00014484556,0.0001081097,0.00015494636,0.0005247877,0.00003948147,0.00021650629,0.0002713648,6.012784e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007837143,0.00009989931,0.13221905,0.00016047402,0.000047200167,0.0000074543655,0.000036251462,0.0000104669,0.85246205,0.00033005766,0.0000066911048,0.0145420125],"study_design_scores_gemma":[0.000944618,0.00044410088,0.05003848,0.0002137082,0.000026983713,0.0000030686485,0.000014873165,0.0008866335,0.94656324,0.00032713223,0.00042273046,0.000114433715],"about_ca_topic_score_codex":0.000755501,"about_ca_topic_score_gemma":0.0000024493768,"teacher_disagreement_score":0.11178287,"about_ca_system_score_codex":0.00015462379,"about_ca_system_score_gemma":0.00026173744,"threshold_uncertainty_score":0.590663},"labels":[],"label_agreement":null},{"id":"W2742645417","doi":"10.1007/978-1-4939-7219-7_16","title":"Studying Nonproliferative Roles for Egfr Signaling in Tissue Morphogenesis Using Dorsal Closure of the Drosophila Embryo","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; University of Waterloo","funders":"","keywords":"Morphogenesis; Biology; Cell biology; Embryo; Neural tube; Drosophila embryogenesis; Signal transduction; Dorsum; Neuroscience; Embryogenesis; Anatomy; Genetics; Gene","score_opus":0.034947221665119155,"score_gpt":0.4012536215041728,"score_spread":0.36630639983905366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742645417","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8576441,0.00092905975,0.14048529,0.00013554581,0.00024137025,0.00048120736,0.000016574188,0.0000026703483,0.000064229636],"genre_scores_gemma":[0.7721163,0.000017618371,0.22759178,0.00009336381,0.000046946105,0.0000507493,0.000029101973,0.00001622529,0.000037920592],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981072,0.00074754044,0.00038297148,0.00043389862,0.00005231841,0.00027607306],"domain_scores_gemma":[0.9991012,0.000057194393,0.00027890192,0.00046917156,0.000071401664,0.000022123011],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001291273,0.00018873473,0.0003155822,0.00008063699,0.00019029238,0.0000129397495,0.0004422596,0.000371669,0.0000037753139],"category_scores_gemma":[0.00050345034,0.00015278628,0.00011139061,0.000085896056,0.0002821687,0.0000047669105,0.00029814497,0.000108989174,2.9825136e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104179795,0.00003738,0.07393128,0.000015808711,0.000046734647,0.0000019398274,0.00006962172,0.00075922674,0.91943574,0.0002163884,0.0000014722439,0.00538024],"study_design_scores_gemma":[0.00072375155,0.0001277778,0.024615325,0.000029865761,0.000018697994,0.000008546734,0.000060430604,0.00022554556,0.97131526,0.0023606482,0.00033941297,0.00017476083],"about_ca_topic_score_codex":0.000042582968,"about_ca_topic_score_gemma":0.00008910243,"teacher_disagreement_score":0.08710651,"about_ca_system_score_codex":0.000028341818,"about_ca_system_score_gemma":0.00009134759,"threshold_uncertainty_score":0.6230444},"labels":[],"label_agreement":null},{"id":"W2742746148","doi":"10.1007/978-1-4939-7219-7_9","title":"Two-Pulse Endosomal Stimulation of Receptor Tyrosine Kinases Induces Cell Proliferation","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Nuclear Laboratories; McMaster University; University of Alberta","funders":"","keywords":"Endosome; Receptor tyrosine kinase; Cell biology; Endocytosis; Tyrosine kinase; Chemistry; Cell growth; Stimulation; Cell; Signal transduction; Biology; Biochemistry; Neuroscience; Intracellular","score_opus":0.02463959644245762,"score_gpt":0.35928714849844906,"score_spread":0.33464755205599145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2742746148","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6059972,0.00043420645,0.3926095,0.000042562213,0.00017100872,0.00018668812,0.00001044231,0.000005036427,0.0005433813],"genre_scores_gemma":[0.8098259,0.0000753312,0.18873534,0.00004316894,0.00009556642,0.000025313571,0.0011094062,0.000017586603,0.00007240644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855953,0.00041166722,0.00035264622,0.00038920942,0.000074010866,0.00021294653],"domain_scores_gemma":[0.9990296,0.00002140834,0.00025982264,0.0005491009,0.000095571,0.000044503064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006458628,0.00017015616,0.00024648782,0.00009831827,0.00009402057,0.000019896635,0.00027041382,0.000272934,0.000039289618],"category_scores_gemma":[0.00027753532,0.00016768703,0.00010373981,0.000058521895,0.00017123685,0.000007721575,0.00008086895,0.00011645291,0.0000019840968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013906031,0.00008399099,0.027401304,0.000022996293,0.000015274527,0.000003145275,0.000037912265,0.00012951641,0.9660611,0.00047436776,0.0000021025223,0.005629244],"study_design_scores_gemma":[0.0010192539,0.00030808503,0.007262134,0.000013583694,0.000018657289,0.0000024993983,0.000015589465,0.00022015753,0.9893977,0.0005789297,0.0009920616,0.00017131535],"about_ca_topic_score_codex":0.00009824877,"about_ca_topic_score_gemma":0.00004532227,"teacher_disagreement_score":0.20387417,"about_ca_system_score_codex":0.000011498927,"about_ca_system_score_gemma":0.000051672025,"threshold_uncertainty_score":0.68380785},"labels":[],"label_agreement":null},{"id":"W2743114779","doi":"10.1007/978-1-4939-7219-7_7","title":"Application of Immunofluorescence Staining to Study ErbB Family of Receptor Tyrosine Kinases","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immunofluorescence; Staining; ErbB; Receptor tyrosine kinase; Intracellular; Cell biology; Phosphorylation; Receptor; Kinase; Biology; Tyrosine kinase; Signal transduction; Molecular biology; Chemistry; Antibody; Biochemistry; Immunology; Genetics","score_opus":0.07838037049551468,"score_gpt":0.5294343681556881,"score_spread":0.45105399766017346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743114779","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5724307,0.0006586402,0.42528242,0.0002567062,0.00009069412,0.00092480995,0.000008589138,0.00000927525,0.00033819157],"genre_scores_gemma":[0.55693334,0.00003906995,0.44282785,0.000064262844,0.00001765435,0.00008364859,0.0000045474562,0.000014250351,0.000015396097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793124,0.0008260262,0.00044765283,0.00035991025,0.0001779266,0.0002572535],"domain_scores_gemma":[0.99812704,0.00019812906,0.0002102765,0.0011541215,0.00024158924,0.00006885597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002712024,0.00011924912,0.00049696356,0.00021736394,0.000048389502,0.0000063025386,0.00047995284,0.00011231422,0.000025032768],"category_scores_gemma":[0.0030641775,0.00010766147,0.000057599358,0.00023325016,0.00025705868,0.00001653175,0.00030654747,0.00021249338,0.000003962812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021833969,0.00019685617,0.078329116,0.00004982748,0.00003320393,0.0000072814464,0.00028516803,0.000004938764,0.767293,0.0003156421,0.000009196569,0.15325743],"study_design_scores_gemma":[0.0009636998,0.0017744419,0.11620801,0.0000957287,0.00002318343,0.0000021262867,0.00046264415,0.00009226973,0.8789827,0.0004111682,0.0008865864,0.00009742789],"about_ca_topic_score_codex":0.0010681519,"about_ca_topic_score_gemma":0.000010503239,"teacher_disagreement_score":0.15315999,"about_ca_system_score_codex":0.00007200389,"about_ca_system_score_gemma":0.000119689714,"threshold_uncertainty_score":0.43903077},"labels":[],"label_agreement":null},{"id":"W2743125138","doi":"10.1007/978-1-4939-7219-7_10","title":"Study of EGFR Signaling/Endocytosis by Site-Directed Mutagenesis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Endocytosis; Mutagenesis; Cell biology; Biology; Signal transduction; Cell signaling; Site-directed mutagenesis; Function (biology); Cell; Mutant; Biochemistry","score_opus":0.02384958934624498,"score_gpt":0.40374504815162005,"score_spread":0.37989545880537506,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743125138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9464207,0.001115405,0.051095694,0.000031360574,0.00030106705,0.00036360807,0.000042557753,0.000022470596,0.0006071151],"genre_scores_gemma":[0.9491792,0.000083381026,0.050182205,0.00014642446,0.00006174305,0.000108257984,0.00006189071,0.000035761837,0.00014114162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973951,0.0011113363,0.0004289925,0.0006342088,0.00009597903,0.00033438185],"domain_scores_gemma":[0.99830914,0.000050960094,0.00033736962,0.0011048047,0.000103740735,0.000093988405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006011943,0.0002505388,0.00040406967,0.00010585595,0.00018895947,0.000031286807,0.0005507987,0.00027165984,0.000048145226],"category_scores_gemma":[0.0007833478,0.0002356682,0.00016440847,0.00009928304,0.00017987328,0.000004216369,0.00040863885,0.0001277136,0.0000029845162],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010788862,0.00047861898,0.044474322,0.0000119251,0.00010725081,0.000015433829,0.00006228844,0.00007469178,0.949912,0.000022159697,0.00041788036,0.0043155397],"study_design_scores_gemma":[0.0013615214,0.0011792596,0.0030402362,0.000012846221,0.00004596548,0.000005741453,0.0001030644,0.000036010882,0.99138105,0.00032807022,0.0022287131,0.0002775343],"about_ca_topic_score_codex":0.0004883407,"about_ca_topic_score_gemma":0.00006957504,"teacher_disagreement_score":0.041469034,"about_ca_system_score_codex":0.000015629725,"about_ca_system_score_gemma":0.000041274623,"threshold_uncertainty_score":0.961027},"labels":[],"label_agreement":null},{"id":"W2743132962","doi":"10.1007/978-1-4939-7219-7_3","title":"C. elegans Vulva Induction: An In Vivo Model to Study Epidermal Growth Factor Receptor Signaling and Trafficking","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Biology; Cell biology; Epidermal growth factor receptor; Caenorhabditis elegans; Signal transduction; MAPK/ERK pathway; Cell growth; Epidermal growth factor; Genetic screen; Cell signaling; Phenotype; Receptor; Genetics; Gene","score_opus":0.11495303203684558,"score_gpt":0.44094079359999105,"score_spread":0.32598776156314546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743132962","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044307627,0.5684713,0.38475144,0.000038521852,0.0005324351,0.0017610751,0.00006660734,0.000027199561,0.00004377221],"genre_scores_gemma":[0.0053021046,0.5158037,0.477629,0.00020817194,0.0003652017,0.00029445763,0.00013336669,0.00019192083,0.000072093455],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99339753,0.0031032339,0.0010076815,0.0016415637,0.00013766489,0.0007123403],"domain_scores_gemma":[0.99808764,0.00007477778,0.00039963215,0.0011108369,0.00009576882,0.00023133225],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021266947,0.000772052,0.0018136168,0.00049169024,0.00015227165,0.00008547909,0.00090543897,0.0011358598,0.000018172508],"category_scores_gemma":[0.0006772703,0.0007577349,0.00024335599,0.00020727774,0.00016800356,0.000010190328,0.0005129548,0.0007121659,0.0000025982713],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039561914,0.00045288427,0.000477229,0.00087967684,0.00027222704,0.000053925778,0.0017353422,0.00062836416,0.2989056,0.000082459825,0.000013732887,0.696459],"study_design_scores_gemma":[0.007272535,0.010357433,0.0002672873,0.004584398,0.0022616251,0.0006194791,0.0017017227,0.0029843033,0.28762838,0.0035494065,0.66590905,0.01286439],"about_ca_topic_score_codex":0.00011958977,"about_ca_topic_score_gemma":0.00014671046,"teacher_disagreement_score":0.6835946,"about_ca_system_score_codex":0.0000716124,"about_ca_system_score_gemma":0.00023702964,"threshold_uncertainty_score":0.99948734},"labels":[],"label_agreement":null},{"id":"W2743384381","doi":"10.1007/978-1-4939-7219-7_15","title":"Measurement of Epidermal Growth Factor Receptor-Derived Signals Within Plasma Membrane Clathrin Structures","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Toronto Metropolitan University","funders":"Canadian Institutes of Health Research","keywords":"Cell biology; Epidermal growth factor receptor; Epidermal growth factor; Protein kinase B; Clathrin; Signal transduction; Phosphorylation; Endocytosis; Internalization; PI3K/AKT/mTOR pathway; Growth factor receptor; Chemistry; Biology; Receptor; Biochemistry","score_opus":0.0400446644931327,"score_gpt":0.3394708471649425,"score_spread":0.2994261826718098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2743384381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5804726,0.000557019,0.4181224,0.00008357199,0.00029659754,0.00021114298,0.000019100178,0.00000769473,0.00022985932],"genre_scores_gemma":[0.8193279,0.00012722224,0.1800976,0.00006946404,0.00007068145,0.000020852236,0.0002354674,0.000029947347,0.000020856973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975505,0.0007788998,0.0005691247,0.00057326263,0.00017814957,0.0003500756],"domain_scores_gemma":[0.9985579,0.000022579941,0.0004026201,0.0007403584,0.00018655715,0.0000899715],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013551047,0.0002853493,0.0004752433,0.000105608065,0.00011004873,0.000019784258,0.000526797,0.0004745108,0.000066762506],"category_scores_gemma":[0.0007710528,0.00026442774,0.00020857286,0.00005416561,0.00033283216,0.000005978487,0.00013644276,0.00021525244,0.0000017083717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020659898,0.00004637074,0.0071192505,0.000047749516,0.0001076044,0.000008929997,0.00007264471,0.00006898084,0.9891696,0.0009043163,0.0000024917763,0.0022454872],"study_design_scores_gemma":[0.0009465808,0.00026390905,0.006224298,0.000026228236,0.000024429359,0.0000068252025,0.00002434537,0.0000730076,0.989709,0.0014641673,0.0009559697,0.00028121102],"about_ca_topic_score_codex":0.000135999,"about_ca_topic_score_gemma":0.00008976684,"teacher_disagreement_score":0.23885529,"about_ca_system_score_codex":0.000023273731,"about_ca_system_score_gemma":0.00009195991,"threshold_uncertainty_score":0.9999808},"labels":[],"label_agreement":null},{"id":"W2744282918","doi":"10.1007/978-1-4939-7219-7_4","title":"Targeting HER2 in Advanced Breast Cancer","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Medicine; Metastatic breast cancer; Oncology; Breast cancer; Internal medicine; Human Epidermal Growth Factor Receptor 2; Clinical trial; Cancer; Targeted therapy; Disease","score_opus":0.18600482413268593,"score_gpt":0.6291759151960609,"score_spread":0.44317109106337493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744282918","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000047159638,0.97841454,0.017668108,0.00027185318,0.0006289878,0.0015450822,0.00006770325,0.000029421903,0.0013696133],"genre_scores_gemma":[7.0472083e-7,0.7472702,0.25116867,0.00013241883,0.00017099394,0.00083294424,0.00006696363,0.00009818059,0.00025894024],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9930331,0.0037527818,0.0010123927,0.0010584799,0.00019923286,0.00094400847],"domain_scores_gemma":[0.9977092,0.00045031498,0.00040251593,0.001163995,0.00010379512,0.00017013952],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00417935,0.00052854983,0.0032505316,0.00071944995,0.000049975202,0.000020110163,0.00074126775,0.0010118507,0.00033420912],"category_scores_gemma":[0.0020728551,0.00043362172,0.0004039168,0.0005322252,0.00029208124,0.000025552044,0.00040554156,0.001993827,0.000028696308],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003119398,0.000049587787,0.0004915783,0.0072057014,0.00008728796,0.00051864673,0.000020191845,0.0000034463944,0.0010971574,0.000076419725,0.000047026046,0.99037176],"study_design_scores_gemma":[0.0006414755,0.00009067903,0.0000585469,0.014100542,0.00012471844,0.0001667603,0.000008539551,0.000023697405,0.00009173701,0.0002731338,0.9840348,0.00038536647],"about_ca_topic_score_codex":0.00072490127,"about_ca_topic_score_gemma":0.00008129173,"teacher_disagreement_score":0.9899864,"about_ca_system_score_codex":0.00084829296,"about_ca_system_score_gemma":0.0013508128,"threshold_uncertainty_score":0.99981153},"labels":[],"label_agreement":null},{"id":"W2744347415","doi":"10.1007/978-1-4939-7219-7_8","title":"Activation of Endosome-Associated Inert EGF Receptor Following Internalization","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; McMaster University; Canadian Nuclear Laboratories","funders":"","keywords":"Internalization; Endosome; Inert; Chemistry; Cell biology; Receptor; Biophysics; Biology; Biochemistry","score_opus":0.02050628960529982,"score_gpt":0.361877291666686,"score_spread":0.34137100206138615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744347415","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45057496,0.00010868557,0.5486017,0.000036879857,0.0002010039,0.000092501774,0.0000032800879,0.000004691641,0.00037628043],"genre_scores_gemma":[0.91353613,0.00007087147,0.0847955,0.000078781435,0.00004271465,0.000018511877,0.0013226132,0.00002158751,0.000113312846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874896,0.0003783831,0.00031401234,0.00030698458,0.00006665514,0.00018501167],"domain_scores_gemma":[0.9991797,0.00001989049,0.0002719409,0.00043463422,0.000062110325,0.00003169241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078502594,0.00013521563,0.00023493462,0.000091905946,0.000067058674,0.0000135985665,0.00029308136,0.0003018624,0.000018800994],"category_scores_gemma":[0.000783333,0.00013839165,0.0001561977,0.000067148096,0.00008674913,0.000006458007,0.000082997845,0.00010170436,9.812302e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006182143,0.000048461923,0.041974153,0.000008149583,0.000062205625,0.0000020568991,0.000039674786,0.000021332582,0.95325935,0.0005899257,0.0000034169022,0.0039294385],"study_design_scores_gemma":[0.0007195809,0.00018635218,0.004724629,0.000036482073,0.000016827722,7.9667444e-7,0.000014751338,0.00015676087,0.9892471,0.0012190087,0.0035291968,0.00014853016],"about_ca_topic_score_codex":0.0001229875,"about_ca_topic_score_gemma":0.000037516886,"teacher_disagreement_score":0.4638062,"about_ca_system_score_codex":0.00002182912,"about_ca_system_score_gemma":0.00003222202,"threshold_uncertainty_score":0.56434476},"labels":[],"label_agreement":null},{"id":"W2744615483","doi":"10.1007/978-1-4939-7219-7_2","title":"New Insights from Drosophila into the Regulation of EGFR Signaling","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"14-3-3 protein interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Drosophila (subgenus); Signal transduction; MAPK/ERK pathway; Biology; Carcinogenesis; Computational biology; Neuroscience; Cell biology; Genetics; Cancer; Gene","score_opus":0.07042652370212173,"score_gpt":0.4601628760293254,"score_spread":0.38973635232720366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744615483","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000051046944,0.70034534,0.29817995,0.00004244006,0.00047017,0.00050992484,0.000013286511,0.00000687668,0.00038096716],"genre_scores_gemma":[0.000058764697,0.6030817,0.3955764,0.00005257287,0.00037316396,0.00011880681,0.0004376218,0.000060476035,0.00024051961],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99535316,0.0026225622,0.00087952585,0.0007827105,0.00010289553,0.00025911687],"domain_scores_gemma":[0.9969306,0.00028333973,0.0009527711,0.0016675112,0.00009630507,0.00006945428],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007157038,0.00044619027,0.0012042144,0.00020279386,0.00011480371,0.000031931293,0.0011101839,0.0010704106,0.000042133335],"category_scores_gemma":[0.001267396,0.00032794382,0.0005857822,0.00016867448,0.00025137048,0.0000043992113,0.00048526886,0.00051889615,0.000010343537],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011948999,0.00001608196,0.0000032436326,0.00019489751,0.0002116189,0.0000028324605,0.000050145747,0.000008941878,0.4120331,0.00078902586,0.000044474782,0.5866337],"study_design_scores_gemma":[0.00018138184,0.00010838783,0.000006488338,0.0010607913,0.00023302124,0.000011028975,0.000008809591,0.00000642179,0.09462501,0.017188096,0.88625044,0.00032012342],"about_ca_topic_score_codex":0.00055645715,"about_ca_topic_score_gemma":0.00007874216,"teacher_disagreement_score":0.886206,"about_ca_system_score_codex":0.00005872674,"about_ca_system_score_gemma":0.000373332,"threshold_uncertainty_score":0.99991727},"labels":[],"label_agreement":null},{"id":"W2744674968","doi":"10.1007/978-1-4939-7219-7_19","title":"Isolation of Human Mesenchymal Stem Cells for Studying ErbB Receptor Signaling","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"ErbB; Mesenchymal stem cell; Carcinogenesis; Cancer research; Signal transduction; Biology; Receptor; Cell biology; Cancer; Biochemistry; Genetics","score_opus":0.1837056690886039,"score_gpt":0.544444254645198,"score_spread":0.3607385855565941,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744674968","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32276377,0.00028930375,0.6751798,0.00024040297,0.00026960947,0.0007540633,0.000007859912,0.00001285205,0.00048234613],"genre_scores_gemma":[0.34066963,0.0000128678,0.6589366,0.000055858316,0.000085659936,0.000059641472,0.000007266449,0.00002474408,0.00014771071],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99793047,0.0008240062,0.00041728775,0.00036241006,0.00012973574,0.0003361121],"domain_scores_gemma":[0.99858034,0.00034729188,0.00022070772,0.00061958755,0.00016374061,0.0000683225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037275185,0.00012843883,0.00046835095,0.00018637053,0.00013723162,0.00001573532,0.0003005194,0.00021039874,0.00006364873],"category_scores_gemma":[0.0005490402,0.000118428245,0.00011738603,0.00008711129,0.00019489684,0.000026038504,0.00014455289,0.00025673036,0.000002601267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009526056,0.00004989803,0.010698089,0.00014263018,0.00004788962,0.0000064483243,0.00023853382,0.000012475138,0.96073806,0.000824875,0.000024944891,0.027120866],"study_design_scores_gemma":[0.0011597963,0.0008107146,0.00059142645,0.00011032143,0.000029368124,0.00000215813,0.00017320432,0.0005880313,0.99400127,0.0015520968,0.00087259285,0.0001090388],"about_ca_topic_score_codex":0.000092110866,"about_ca_topic_score_gemma":0.000007282812,"teacher_disagreement_score":0.03326316,"about_ca_system_score_codex":0.0000952422,"about_ca_system_score_gemma":0.000096855736,"threshold_uncertainty_score":0.48293638},"labels":[],"label_agreement":null},{"id":"W2744854290","doi":"10.1007/978-1-4939-7219-7_13","title":"Cell Cycle Synchronization of HeLa Cells to Assay EGFR Pathway Activation","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Mitosis; Cell cycle; Anaphase; Nocodazole; Prometaphase; Cell biology; Metaphase; Telophase; Cell synchronization; Biology; Cell; Genetics; Chromosome","score_opus":0.01039319214810964,"score_gpt":0.3368116355483427,"score_spread":0.32641844340023307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2744854290","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2225227,0.00014708514,0.7755343,0.00008961965,0.00018670717,0.00022322823,0.000013489703,0.000005017549,0.0012778972],"genre_scores_gemma":[0.6069588,0.00007228694,0.39232537,0.00027143984,0.000056498557,0.000028863004,0.00007884428,0.000026586598,0.00018131573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846745,0.000511695,0.00028966388,0.00042062998,0.00005515843,0.0002554],"domain_scores_gemma":[0.99881226,0.000029543391,0.00022612371,0.0007820085,0.00009190409,0.000058133934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008304855,0.00016439515,0.00023446298,0.00009787198,0.00007782398,0.000018615203,0.00042486182,0.00033086713,0.000012463057],"category_scores_gemma":[0.0004221635,0.00016873099,0.00008695412,0.000075034775,0.000093112234,0.0000044676067,0.00027322627,0.00010504781,0.000005113011],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030010438,0.000068147056,0.0008361105,0.000023236797,0.00001651303,0.0000016556947,0.000034035515,0.0004612388,0.9812206,0.00040606174,0.000040778235,0.016861608],"study_design_scores_gemma":[0.00036586323,0.00021005687,0.00034155548,0.00001629901,0.000008091085,0.0000015313399,0.000017656817,0.00041553235,0.99161583,0.0005417639,0.0062849466,0.00018084243],"about_ca_topic_score_codex":0.000090486275,"about_ca_topic_score_gemma":0.00002221562,"teacher_disagreement_score":0.38443607,"about_ca_system_score_codex":0.000027538446,"about_ca_system_score_gemma":0.000066369554,"threshold_uncertainty_score":0.68806493},"labels":[],"label_agreement":null},{"id":"W2745112655","doi":"10.1007/978-1-4939-7219-7_1","title":"ErbB Receptors and Cancer","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":431,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"ErbB; Receptor tyrosine kinase; ERBB3; ERBB4; Cancer research; Receptor; Epidermal growth factor receptor; Biology; Epidermal growth factor; Signal transduction; Neuregulin; Tyrosine kinase; Growth factor receptor; Cell biology; Biochemistry","score_opus":0.3336806821133151,"score_gpt":0.6622974962907782,"score_spread":0.3286168141774631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2745112655","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[9.95926e-7,0.9770463,0.017538648,0.00022713467,0.00074804906,0.0010451103,0.000021050211,0.000022573638,0.0033501377],"genre_scores_gemma":[4.1016825e-8,0.75821453,0.24017811,0.0001032252,0.00016086614,0.0002920371,0.000031725485,0.00006550002,0.00095395494],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953271,0.0026562589,0.00055139634,0.00079118856,0.00013292662,0.0005411152],"domain_scores_gemma":[0.9981341,0.00037448748,0.00024278571,0.0009990713,0.00006454291,0.0001850363],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025650107,0.00038989005,0.002471951,0.00044852585,0.000053578427,0.000020668887,0.0004132527,0.0009612399,0.0003162133],"category_scores_gemma":[0.0017937965,0.0002979865,0.0002891895,0.00023276375,0.0005699458,0.000011158873,0.00026660293,0.0012220829,0.000020319032],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008995346,0.00002183198,0.00007478434,0.0055359104,0.00013305963,0.0001146091,0.000022468203,2.3475973e-8,0.00017965083,0.0002921179,0.00026669778,0.99334985],"study_design_scores_gemma":[0.00026691417,0.00013945765,0.0000055335863,0.010400766,0.00029663637,0.00010728873,0.000003441812,0.0000023707566,0.00012792685,0.0006414335,0.98775923,0.00024897893],"about_ca_topic_score_codex":0.00022049226,"about_ca_topic_score_gemma":0.0000148709505,"teacher_disagreement_score":0.9931009,"about_ca_system_score_codex":0.00035923359,"about_ca_system_score_gemma":0.00094852684,"threshold_uncertainty_score":0.99994725},"labels":[],"label_agreement":null},{"id":"W2745263378","doi":"10.1007/978-1-4939-7219-7_18","title":"Assessment of Specificity of an Adenovirus Targeted to HER3/4","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Virus; Colocalization; Biology; Receptor; Reporter gene; Internalization; Virology; Vectors in gene therapy; Genetic enhancement; Gene; Computational biology; Gene expression; Molecular biology; Viral vector; Recombinant DNA; Genetics","score_opus":0.04994268054998175,"score_gpt":0.4781665055975217,"score_spread":0.42822382504754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2745263378","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76270175,0.00029963214,0.23549412,0.000078679426,0.00011135136,0.0002829063,0.000032375356,0.0000041177886,0.0009950602],"genre_scores_gemma":[0.57582164,0.00004024998,0.42387688,0.00010220044,0.000040444284,0.000025735002,0.000031069147,0.00002225028,0.00003955934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99716055,0.0013932543,0.0004226113,0.0005304987,0.0001376772,0.00035540364],"domain_scores_gemma":[0.9979039,0.000036525737,0.0002381465,0.0015482244,0.00015768224,0.00011552598],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021813053,0.00018457173,0.00041805024,0.00016853315,0.00006205553,0.000012359818,0.00097443705,0.00027276477,0.000059789458],"category_scores_gemma":[0.0005757067,0.00018108096,0.00011978535,0.00011772837,0.00031818126,0.0000035572857,0.00039972132,0.00017303543,0.0000015348832],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004944732,0.00015986123,0.0061024986,0.000015612377,0.00005937661,0.000007997118,0.000019466985,0.00016674287,0.97119457,0.00041611414,0.000008106067,0.021355191],"study_design_scores_gemma":[0.0005962835,0.003611985,0.017515725,0.000008934251,0.0000072779026,0.000002750469,0.000022564347,0.00012330164,0.97612286,0.00088107947,0.00093431276,0.00017292696],"about_ca_topic_score_codex":0.00013409652,"about_ca_topic_score_gemma":0.0001892497,"teacher_disagreement_score":0.18838274,"about_ca_system_score_codex":0.00002444399,"about_ca_system_score_gemma":0.0001522106,"threshold_uncertainty_score":0.73842674},"labels":[{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"empirical","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"opus","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2745437332","doi":"10.1007/978-1-4939-7237-1_14","title":"Discovery of Variants Underlying Host Susceptibility to Virus Infection Using Whole-Exome Sequencing","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University Health Centre; McGill University","funders":"","keywords":"Exome sequencing; Biology; Exome; Context (archaeology); Host (biology); Computational biology; Identification (biology); Genetics; Phenotype; Gene","score_opus":0.08400514743274963,"score_gpt":0.42236815016172674,"score_spread":0.3383630027289771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2745437332","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4922835,0.00008509542,0.5070794,0.000026715454,0.00020475249,0.00018046779,0.000011177258,0.00000419805,0.00012465987],"genre_scores_gemma":[0.6532475,0.0000284775,0.34650794,0.00009402856,0.000041349736,0.000017692677,0.000009594844,0.00002121552,0.000032220978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975788,0.0010044177,0.00039181727,0.00059659866,0.000078613884,0.00034976072],"domain_scores_gemma":[0.9985079,0.000046709145,0.00027592556,0.0010374816,0.00007081505,0.00006117431],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001956477,0.00021410675,0.00036255826,0.00013005847,0.00016308246,0.000050540144,0.00039131762,0.00034980732,0.0000074444574],"category_scores_gemma":[0.0015378298,0.00021291451,0.00013847752,0.00009501949,0.00015575413,0.000014581555,0.00038142147,0.0001270039,0.0000022250365],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067991954,0.00003081505,0.007380543,0.000025150199,0.000038957845,0.000006851172,0.00003476785,0.0001492435,0.98619926,0.00041763615,8.071825e-7,0.0056479713],"study_design_scores_gemma":[0.00026026575,0.00027781233,0.008585367,0.000044394455,0.000019271047,0.0000123875525,0.000025721614,0.00012286397,0.98698026,0.0032756922,0.00016185698,0.0002341332],"about_ca_topic_score_codex":0.0012697937,"about_ca_topic_score_gemma":0.00028312884,"teacher_disagreement_score":0.16096397,"about_ca_system_score_codex":0.00006670347,"about_ca_system_score_gemma":0.0001128447,"threshold_uncertainty_score":0.86824024},"labels":[],"label_agreement":null},{"id":"W2746305846","doi":"10.1007/978-1-4939-7027-8_1","title":"A Practical Guide to Quantitative Interactor Screening with Next-Generation Sequencing (QIS-Seq)","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Interactor; Computational biology; Identification (biology); Throughput; Biology; Yeast; Protein–protein interaction; Computer science; Genetics; Cell biology","score_opus":0.12243924290958852,"score_gpt":0.4588352077437685,"score_spread":0.33639596483418,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2746305846","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041589692,0.00013562126,0.95572937,0.0006926884,0.00023826932,0.00029263503,0.0000072678527,0.000008638511,0.0013058367],"genre_scores_gemma":[0.08427326,0.000021816662,0.9142121,0.0011055969,0.00014193254,0.00004796642,0.000069086374,0.000027281321,0.000100940124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831575,0.0003706087,0.00038627448,0.0004666634,0.00007433322,0.0003863575],"domain_scores_gemma":[0.9987243,0.00006287041,0.00025023107,0.0007312637,0.00011561827,0.00011574602],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012428976,0.00022550522,0.00027732956,0.00009100831,0.00017690638,0.00012663995,0.0003574941,0.00025915672,0.000011959231],"category_scores_gemma":[0.0011592829,0.00019346939,0.00007365927,0.000069649184,0.00014918557,0.000016363423,0.00032355517,0.00024065217,0.000006546765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013230377,0.000016051827,0.00048493306,0.0000066410103,0.00006813407,0.00002093226,0.00010941812,0.00039268745,0.97692627,0.004816992,0.000366666,0.016658973],"study_design_scores_gemma":[0.0017326595,0.002299284,0.0005367533,0.00011136915,0.00006430113,0.00017572641,0.0006256961,0.03609164,0.9106253,0.0023489268,0.04432151,0.0010668752],"about_ca_topic_score_codex":0.00011066498,"about_ca_topic_score_gemma":0.00024051998,"teacher_disagreement_score":0.06630101,"about_ca_system_score_codex":0.000041709813,"about_ca_system_score_gemma":0.00012749866,"threshold_uncertainty_score":0.78894526},"labels":[],"label_agreement":null},{"id":"W2746548722","doi":"10.1007/978-1-4939-7237-1_1","title":"The Application of Humanized Mouse Models for the Study of Human Exclusive Viruses","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Biology; Humanized mouse; Population; Virus; Virology; Animal model; Immune system; Computational biology; Immunology; Medicine","score_opus":0.14728970021946167,"score_gpt":0.4597611404305535,"score_spread":0.31247144021109186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2746548722","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8345975,0.00026512018,0.16334523,0.00038397269,0.00004153911,0.0010858828,0.000009593611,0.00000822833,0.00026287034],"genre_scores_gemma":[0.99223036,0.00003375883,0.007299801,0.00011797064,0.000030181182,0.00024434982,0.000006249385,0.000001149259,0.00003615475],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9985703,0.0007110422,0.00030688808,0.00021014566,0.000041276562,0.00016031931],"domain_scores_gemma":[0.998312,0.0010429309,0.00035154185,0.00023106938,0.00004752422,0.000014919912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015069124,0.00008734803,0.00024051487,0.000010000007,0.00047612298,0.000012009092,0.0008008705,0.00006693255,0.000005041544],"category_scores_gemma":[0.00038540552,0.000026518179,0.00009235244,0.00005166116,0.00028105464,0.000022002507,0.00027393902,0.00005839364,2.523102e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098183,0.00012020321,0.007345226,0.0000042926067,0.000050606483,1.8888278e-7,0.00007165165,0.000058064437,0.8807792,0.0700818,0.000012411701,0.041378163],"study_design_scores_gemma":[0.0023115112,0.0044925897,0.26637483,0.000013992652,0.00030480174,5.4401346e-7,0.005971154,0.021388121,0.08536834,0.6068039,0.0064319493,0.000538295],"about_ca_topic_score_codex":0.0006246641,"about_ca_topic_score_gemma":0.000662175,"teacher_disagreement_score":0.7954109,"about_ca_system_score_codex":0.000004470565,"about_ca_system_score_gemma":0.000001976967,"threshold_uncertainty_score":0.36620012},"labels":[],"label_agreement":null},{"id":"W2747113601","doi":"10.1007/978-1-4939-7113-8_25","title":"Histological and Electron Microscope Staining for the Identification of Elastic Fiber Networks","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Electron microscope; Elastin; Staining; Ultrastructure; Elastic fiber; Histology; Negative stain; Matrix (chemical analysis); Extracellular matrix; Microscopy; Transmission electron microscopy; Materials science; Identification (biology); Pathology; Chemistry; Biology; Anatomy; Composite material; Nanotechnology; Optics; Cell biology; Physics; Medicine; Botany","score_opus":0.03260879172714054,"score_gpt":0.45084652466430547,"score_spread":0.41823773293716493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747113601","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17597286,0.0054529216,0.81785893,0.00022903064,0.000060294497,0.00034151998,0.000004444652,0.000002255607,0.00007775429],"genre_scores_gemma":[0.9158695,0.0003072667,0.08330491,0.00005844538,0.00003872118,0.00015308827,0.00002842683,0.0000179976,0.00022164606],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987253,0.00042993258,0.00023139206,0.00033202276,0.00003335862,0.00024802366],"domain_scores_gemma":[0.9990016,0.00024986922,0.00016984034,0.00046907514,0.000087186825,0.000022429645],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015026078,0.0000997652,0.00016974354,0.000039839768,0.00015166927,0.000020861387,0.0003487319,0.00017618758,0.000006309457],"category_scores_gemma":[0.0029624163,0.00007829482,0.000055312106,0.00003678939,0.00041577686,0.0000019289575,0.0002156587,0.00011962177,3.310455e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114156224,0.000017371241,0.0018547593,0.000010102633,0.000036908004,6.3546156e-7,0.000015268746,0.00011694463,0.96153486,0.0008372708,0.000017095259,0.03544464],"study_design_scores_gemma":[0.00085274753,0.00060558505,0.014619566,0.000008772483,0.000034846675,0.000008630459,0.00005041196,0.0040682843,0.96674097,0.0036899068,0.009128775,0.00019150904],"about_ca_topic_score_codex":0.000028993754,"about_ca_topic_score_gemma":0.00002237278,"teacher_disagreement_score":0.7398966,"about_ca_system_score_codex":0.000012323114,"about_ca_system_score_gemma":0.000032747026,"threshold_uncertainty_score":0.3546503},"labels":[],"label_agreement":null},{"id":"W2747205617","doi":"10.1007/978-1-4939-7253-1_21","title":"Tracking Extracellular Vesicles Delivery and RNA Translation Using Multiplexed Reporters","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Microvesicles; RNA; Extracellular vesicles; Translation (biology); Cell biology; Extracellular vesicle; Vesicle; Microvesicle; Multiplexing; Exosome; Chemistry; microRNA; Biophysics; Extracellular; Biology; Messenger RNA; Computer science; Biochemistry; Gene; Telecommunications","score_opus":0.05685904854410903,"score_gpt":0.39681232712289227,"score_spread":0.3399532785787832,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747205617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5890491,0.006020336,0.40438738,0.000051554598,0.00014435124,0.00019828216,0.000005795327,0.000011419394,0.0001317996],"genre_scores_gemma":[0.55031514,0.00011887888,0.44935942,0.000058619597,0.00005697122,0.000011395387,0.000027679125,0.000032012915,0.000019898791],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752235,0.0007424128,0.00048672268,0.00075440516,0.000088815534,0.00040530856],"domain_scores_gemma":[0.9984496,0.000054629523,0.0003334472,0.0009796802,0.00006102682,0.00012161341],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014054254,0.00027249072,0.0003057229,0.00011405158,0.00024138733,0.000079654754,0.00039441025,0.00037669885,0.00000785812],"category_scores_gemma":[0.0007342598,0.0002969468,0.00014134803,0.000054606207,0.00043713034,0.00001645484,0.00020180846,0.00019550994,8.7235884e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007619478,0.00004407185,0.009868101,0.000021300853,0.000045401663,0.00010470767,0.00005034085,0.000116151794,0.9025416,0.00013960974,0.0000016659465,0.08699088],"study_design_scores_gemma":[0.00095406006,0.000089396875,0.004412679,0.000029996041,0.00005339638,0.000062793166,0.000053374722,0.0038220435,0.9875012,0.0016317972,0.0010087742,0.00038050988],"about_ca_topic_score_codex":0.00007477836,"about_ca_topic_score_gemma":0.00002154799,"teacher_disagreement_score":0.08661036,"about_ca_system_score_codex":0.000023525618,"about_ca_system_score_gemma":0.000060698152,"threshold_uncertainty_score":0.99994826},"labels":[],"label_agreement":null},{"id":"W2747365495","doi":"10.1007/978-1-4939-7216-6_10","title":"In Ovo Electroporation Methods in Chick Embryos","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"In ovo; Electroporation; Embryo; Biology; Ex vivo; Cell biology; Anatomy; In vivo; Gene; Genetics","score_opus":0.02442222159154779,"score_gpt":0.44339622055022687,"score_spread":0.4189739989586791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747365495","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3106592,0.0014490188,0.68512756,0.0005736601,0.00036324828,0.0003118415,0.000001882333,0.0000059804456,0.0015075925],"genre_scores_gemma":[0.2039313,0.0004963871,0.794478,0.00029657336,0.00018212463,0.000073040654,0.000048068898,0.000034256973,0.00046027018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968504,0.0014650304,0.00043496944,0.0007794925,0.00005610123,0.0004140258],"domain_scores_gemma":[0.998828,0.000021707581,0.00019740488,0.00085700885,0.000049368115,0.00004654267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002606568,0.00021485542,0.0003216299,0.0002079724,0.00007551313,0.00002977709,0.00040466827,0.00045826926,0.00001680997],"category_scores_gemma":[0.0010141779,0.00021055719,0.00008791136,0.00015161844,0.0001858105,0.000006635187,0.00023784016,0.00030269855,0.0000033119484],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008012752,0.000071707014,0.009060551,0.000008610667,0.000013480929,0.000012396177,0.00003188951,0.00010851052,0.9690316,0.0012874273,0.000024283736,0.02026943],"study_design_scores_gemma":[0.00068021734,0.00035352889,0.018932644,0.0000084611975,0.0000067113037,0.000016648575,0.000025864283,0.00036325923,0.95621985,0.0092207575,0.0138972085,0.00027485448],"about_ca_topic_score_codex":0.00021083381,"about_ca_topic_score_gemma":0.00027693436,"teacher_disagreement_score":0.109350406,"about_ca_system_score_codex":0.00004073972,"about_ca_system_score_gemma":0.000075900585,"threshold_uncertainty_score":0.8586273},"labels":[],"label_agreement":null},{"id":"W2747443024","doi":"10.1007/978-1-4939-7113-8_5","title":"Transplanting Human Skin Grafts onto Nude Mice to Model Skin Scars","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Dermatologic Treatments and Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"University of Alberta","keywords":"Scars; Animal model; Medicine; Artificial skin; Transplantation; Human skin; Pathology; Dermatology; Surgery; Biology; Internal medicine","score_opus":0.06731409598713324,"score_gpt":0.5061956186550607,"score_spread":0.43888152266792746,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747443024","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59811115,0.00023342858,0.39149597,0.0012596669,0.000097570686,0.00047032564,0.000008094562,0.000028628985,0.008295142],"genre_scores_gemma":[0.46646145,0.000025622347,0.53246075,0.0004283715,0.000022118154,0.000047441004,0.000015870219,0.000018960518,0.00051940425],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981099,0.0004995639,0.00029108202,0.00047316038,0.00011578147,0.00051050563],"domain_scores_gemma":[0.99898374,0.00007391647,0.00007600306,0.0006631014,0.000048390106,0.00015485447],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009699326,0.00019123177,0.00048597995,0.00020739557,0.00021374955,0.000029795414,0.00038013287,0.0002504032,0.00001966243],"category_scores_gemma":[0.0002110765,0.00014378496,0.00013262306,0.00007908986,0.00017368043,0.000025178697,0.00014158215,0.0002827481,0.000013996696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097105214,0.00020198351,0.01387064,0.000055356544,0.000110939465,0.0005978509,0.00039072393,0.00007784438,0.93246174,0.0030292228,0.00005932199,0.049047302],"study_design_scores_gemma":[0.005809236,0.000741279,0.045199655,0.00028447923,0.00017668921,0.0006232103,0.00014392147,0.0051292665,0.9247958,0.012831853,0.003606346,0.0006582444],"about_ca_topic_score_codex":0.0005269472,"about_ca_topic_score_gemma":0.00011192209,"teacher_disagreement_score":0.14096479,"about_ca_system_score_codex":0.00005268175,"about_ca_system_score_gemma":0.000049161634,"threshold_uncertainty_score":0.58633804},"labels":[],"label_agreement":null},{"id":"W2747611974","doi":"10.1007/978-1-4939-7283-8_7","title":"Isolation, Culture, and Differentiation of Fibro/Adipogenic Progenitors (FAPs) from Skeletal Muscle","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Progenitor cell; Skeletal muscle; Biology; Cell biology; Cell sorting; Population; Regeneration (biology); Adipogenesis; Myocyte; Mesenchymal stem cell; Stem cell; Cell; Anatomy; Genetics; Medicine","score_opus":0.01294266401594793,"score_gpt":0.34448999002961583,"score_spread":0.3315473260136679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747611974","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.756658,0.0016353356,0.24103226,0.00003984367,0.00016561947,0.00015262456,0.000020804995,0.0000053379076,0.00029015783],"genre_scores_gemma":[0.8597896,0.00016933949,0.13964474,0.00006801147,0.00006422282,0.000025236664,0.00019316994,0.000013871843,0.00003180491],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861336,0.0004769268,0.00025434335,0.0004192361,0.00003995246,0.0001961933],"domain_scores_gemma":[0.99913406,0.00002931485,0.00021780744,0.0005229853,0.000050683637,0.00004511588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027118693,0.00016008367,0.00023851955,0.00005059672,0.000107883774,0.00001295179,0.00026136756,0.00033764087,0.000017320179],"category_scores_gemma":[0.00044191242,0.00014907776,0.00009453152,0.000036007135,0.0002977896,0.000005945462,0.00020335773,0.0001055888,0.0000010440478],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004754909,0.000041737287,0.024079027,0.000010486568,0.000065189604,6.9147615e-7,0.00004877324,0.0000070119027,0.96309495,0.0006402653,0.000014169375,0.011950141],"study_design_scores_gemma":[0.0010911583,0.0003789184,0.2106652,0.000012477882,0.000045567765,0.0000020665163,0.000048330632,0.00023639905,0.76606786,0.019214394,0.0019584778,0.0002791515],"about_ca_topic_score_codex":0.00011573588,"about_ca_topic_score_gemma":0.000042161657,"teacher_disagreement_score":0.1970271,"about_ca_system_score_codex":0.000005219884,"about_ca_system_score_gemma":0.000026619735,"threshold_uncertainty_score":0.6079215},"labels":[],"label_agreement":null},{"id":"W2747892670","doi":"10.1007/978-1-4939-7113-8_6","title":"Hypertrophic Scarring in the Rabbit Ear: A Practical Model for Studying Dermal Fibrosis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Dermatologic Treatments and Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Hypertrophic scar; Fibrosis; Pathology; Medicine; Animal model; Dermatology; Internal medicine","score_opus":0.1856066404186868,"score_gpt":0.5366407099895193,"score_spread":0.3510340695708325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2747892670","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.495974,0.00031024523,0.49625534,0.0059132813,0.00006155922,0.0007836098,0.000002724992,0.000010485524,0.00068874774],"genre_scores_gemma":[0.5203252,0.000025532157,0.47908542,0.0003323557,0.000016068709,0.00016606138,0.0000031213078,0.000009172686,0.00003709973],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9981943,0.0007732243,0.00022648729,0.0003107201,0.000099330995,0.00039596873],"domain_scores_gemma":[0.9988128,0.00048768608,0.00006768711,0.0005455633,0.00003811713,0.00004816922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001740639,0.00012503867,0.00034481828,0.00011779101,0.00017687959,0.000037290545,0.0002443024,0.0001753628,0.000004544033],"category_scores_gemma":[0.0017979365,0.00007222253,0.00010230443,0.00005338858,0.00016328268,0.00003404647,0.00015541528,0.0003261988,0.0000018607989],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009951799,0.0010657143,0.2703077,0.00018791712,0.00027694012,0.0019158464,0.0015687371,0.00042445227,0.62952,0.010132229,0.00007027057,0.08353501],"study_design_scores_gemma":[0.025402645,0.002880807,0.24473116,0.00042636914,0.0005415876,0.0026918352,0.0018196941,0.5712325,0.08217953,0.063931435,0.0030592983,0.0011031722],"about_ca_topic_score_codex":0.00006645587,"about_ca_topic_score_gemma":0.000015168117,"teacher_disagreement_score":0.57080805,"about_ca_system_score_codex":0.000039228402,"about_ca_system_score_gemma":0.000081763304,"threshold_uncertainty_score":0.29451492},"labels":[],"label_agreement":null},{"id":"W2748059841","doi":"10.1007/978-1-4939-7237-1_16","title":"Isolation of Group 2 Innate Lymphoid Cells from Mouse Lungs","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Innate lymphoid cell; Immunology; Immune system; Biology; Inflammation; Innate immune system; Acquired immune system; Lung; Immunity; Allergic inflammation; Respiratory tract; Flow cytometry; Medicine; Respiratory system; Internal medicine","score_opus":0.01894049331964439,"score_gpt":0.33705728566333526,"score_spread":0.3181167923436909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2748059841","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45243022,0.00097361807,0.5426093,0.000043961776,0.0012502273,0.0001910492,0.00059400155,0.000031698735,0.0018759692],"genre_scores_gemma":[0.56271863,0.0002530182,0.43580192,0.0002852316,0.00004466711,0.000029766377,0.0003444031,0.000035458666,0.0004869187],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972163,0.0014899381,0.00044409002,0.00044770795,0.000021193104,0.0003807575],"domain_scores_gemma":[0.9984819,0.00022433711,0.0003740736,0.00083188724,0.00006689608,0.000020863326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093718,0.0002165192,0.0005088704,0.00015864152,0.00015834993,0.000011970389,0.0005861548,0.00063528423,0.00010791819],"category_scores_gemma":[0.0005725655,0.00020172608,0.000119345554,0.000077021185,0.00047675596,0.000062915744,0.0002596717,0.00027301576,0.00006851469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010475721,0.000077538556,0.004970104,0.00001144177,0.00009420323,0.0000071483464,0.00025118058,0.0000032035487,0.98362094,0.002610488,0.000060207265,0.008188778],"study_design_scores_gemma":[0.0013248608,0.0001743019,0.0019058665,0.000015767824,0.00002978485,0.0000074630843,0.000040003026,0.00003059903,0.9743303,0.0066095134,0.015324635,0.00020689907],"about_ca_topic_score_codex":0.0011588974,"about_ca_topic_score_gemma":0.00007223217,"teacher_disagreement_score":0.1102884,"about_ca_system_score_codex":0.000037316182,"about_ca_system_score_gemma":0.000050725703,"threshold_uncertainty_score":0.8226151},"labels":[],"label_agreement":null},{"id":"W2748802276","doi":"10.1007/978-1-4939-7144-2_11","title":"Negative Enrichment and Isolation of Circulating Tumor Cells for Whole Genome Amplification","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Princess Margaret Cancer Centre; University of Toronto","funders":"","keywords":"Circulating tumor cell; Biology; Laser capture microdissection; Population; Genome; Exome sequencing; Breast cancer; Computational biology; Cancer research; Cancer; Metastasis; Genetics; Medicine; Gene; Gene expression","score_opus":0.04759671009732783,"score_gpt":0.424273176007383,"score_spread":0.3766764659100552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2748802276","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12270767,0.00043263103,0.8757495,0.00022194043,0.00008972214,0.00047069878,0.000022759203,0.000004156261,0.0003008733],"genre_scores_gemma":[0.32016933,0.000023878283,0.67960316,0.0000900038,0.000022652419,0.000041790405,0.00001833112,0.000007471674,0.000023399054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992336,0.00014693233,0.00022644312,0.00022140134,0.000034412962,0.00013722862],"domain_scores_gemma":[0.99926144,0.000120588054,0.0002349851,0.00028248836,0.0000664861,0.000034000805],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008371245,0.00007701526,0.0002625066,0.00007641037,0.000060263592,0.000007945611,0.00005926343,0.000055551132,0.0000071699947],"category_scores_gemma":[0.0003904975,0.000070613365,0.00005237517,0.000039914208,0.00009716189,0.00001849482,0.000045358163,0.000060453258,3.6539245e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049265283,0.000024310624,0.0017490644,0.00006614553,0.000024897661,0.0000015711987,0.00017224738,0.00001541676,0.9683823,0.00082277175,0.0000014188538,0.028690575],"study_design_scores_gemma":[0.0015557004,0.00031372329,0.019260874,0.000035542318,0.00009348065,0.000007886927,0.00012306587,0.0013584155,0.9665523,0.0072481446,0.0033358724,0.00011500475],"about_ca_topic_score_codex":0.000084269835,"about_ca_topic_score_gemma":0.0000045368915,"teacher_disagreement_score":0.19746166,"about_ca_system_score_codex":0.000034174987,"about_ca_system_score_gemma":0.000029680748,"threshold_uncertainty_score":0.28795296},"labels":[],"label_agreement":null},{"id":"W2749218590","doi":"10.1007/978-1-4939-7225-8_17","title":"Light Microscopy, Transmission Electron Microscopy, and Immunohistochemistry Protocols for Studying Photorespiration","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Photorespiration; Transmission electron microscopy; Electron microscope; Immunohistochemistry; Microscopy; Resolution (logic); Biology; Pathology; Ultrastructure; Staining; High-resolution transmission electron microscopy; Biophysics; Cell biology; Biological system; Nanotechnology; Chemistry; Materials science; Computer science; Botany; Optics; Artificial intelligence; Physics; Medicine","score_opus":0.021878195120343804,"score_gpt":0.4376984779499073,"score_spread":0.4158202828295635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2749218590","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2452042,0.0008737065,0.74979025,0.00013874157,0.00008701748,0.0036796008,0.000010041754,0.00001091678,0.00020551555],"genre_scores_gemma":[0.20866938,0.00019641386,0.78208125,0.00039593756,0.0001167946,0.008174163,0.000074772586,0.00007955274,0.00021174093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837214,0.00018408439,0.00032159404,0.0006612861,0.000052208678,0.00040868737],"domain_scores_gemma":[0.9989486,0.000024768373,0.00022378075,0.000654649,0.000073287556,0.00007493467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009450242,0.00025416937,0.00031124297,0.000053591357,0.00029526168,0.00007189555,0.00044964178,0.00037724865,0.000004233386],"category_scores_gemma":[0.00031167018,0.00024282458,0.000100444944,0.000034065084,0.000110408466,0.000006503285,0.00016475665,0.00014696753,3.723892e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028401008,0.00006632136,0.00012314452,0.000094853356,0.000025612071,0.0000019646434,0.000038408412,8.051969e-7,0.9892582,0.0001667573,0.000009636807,0.009930272],"study_design_scores_gemma":[0.001181828,0.00066244055,0.000029702103,0.000060917286,0.000019045447,0.000016355514,0.000015159407,0.00005385458,0.97052073,0.0027657032,0.024402102,0.00027215466],"about_ca_topic_score_codex":0.000018731158,"about_ca_topic_score_gemma":0.0000035969417,"teacher_disagreement_score":0.036534812,"about_ca_system_score_codex":0.000026591772,"about_ca_system_score_gemma":0.00010360189,"threshold_uncertainty_score":0.9902099},"labels":[],"label_agreement":null},{"id":"W2749515750","doi":"10.1007/978-1-4939-7144-2_2","title":"Microfluidic Separation of Circulating Tumor Cells Based on Size and Deformability","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Bio-sensing Technologies","field":"Engineering","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Circulating tumor cell; Microfluidics; Ratchet; Funnel; Immunofluorescence; Biomedical engineering; Materials science; Cancer; Metastasis; Biology; Nanotechnology; Chemistry; Immunology; Medicine; Computer science; Internal medicine; Antibody","score_opus":0.018107778891428786,"score_gpt":0.3460341985365558,"score_spread":0.32792641964512703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2749515750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5817906,0.0008674982,0.41671157,0.000043864566,0.00011711509,0.00010490426,0.000005183442,0.00006477307,0.00029447878],"genre_scores_gemma":[0.6638616,0.00008002152,0.33599928,0.0000390253,0.0000049847977,0.0000035208402,0.0000017848614,0.000008624328,0.0000012148002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991848,0.00018004913,0.00023591776,0.00019210848,0.00003268121,0.00017447515],"domain_scores_gemma":[0.9992273,0.00018946387,0.00007362408,0.00047150065,0.000020084033,0.000018040933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007803887,0.00012343102,0.00024111693,0.00007564187,0.000055545876,0.000012778934,0.00016543371,0.00016199193,0.000004335781],"category_scores_gemma":[0.0006551372,0.00011117678,0.000042883643,0.0000518676,0.0002335436,0.00002039148,0.00006551014,0.00014668857,8.06691e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007496962,0.0000099147965,0.0021768853,0.000044677257,0.000005576694,0.000005717672,0.000017751694,0.000066478555,0.98589844,0.00019739525,0.000017367849,0.011552279],"study_design_scores_gemma":[0.00022679668,0.000058851852,0.002473029,0.000025606563,0.0000065359786,0.0000042234637,0.000013546908,0.0085044885,0.9857835,0.0025235512,0.00026794427,0.000111933165],"about_ca_topic_score_codex":0.000028797058,"about_ca_topic_score_gemma":0.0000012260456,"teacher_disagreement_score":0.08207095,"about_ca_system_score_codex":0.000030619085,"about_ca_system_score_gemma":0.000011763142,"threshold_uncertainty_score":0.45336574},"labels":[],"label_agreement":null},{"id":"W274979542","doi":"10.1007/978-1-60761-362-6_11","title":"Intracellular Staining for Analysis of the Expression and Phosphorylation of Signal Transducers and Activators of Transcription (STATs) in NK Cells","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; Health Canada; National Institutes of Health","keywords":"STAT4; STAT1; Intracellular; Cell biology; Phosphorylation; Signal transduction; Transcription factor; stat; Biology; Interferon; STAT protein; STAT3; Immunology; Biochemistry; Gene","score_opus":0.016243293193556357,"score_gpt":0.32020595912943817,"score_spread":0.30396266593588184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W274979542","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63756347,0.0010828208,0.3610184,0.000026280499,0.00012705654,0.00015793458,0.0000039410615,0.0000019701224,0.000018121018],"genre_scores_gemma":[0.97889763,0.00011474206,0.020908196,0.000026265956,0.0000012277478,0.000006169464,0.0000227375,0.000004045243,0.000019005538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984895,0.00080819445,0.0004030006,0.00017303848,0.000015898639,0.00011038738],"domain_scores_gemma":[0.9994313,0.00020783818,0.00020648679,0.00010822205,0.00004031473,0.0000057965317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007550653,0.000088563225,0.00034306187,0.00032673476,0.000021821614,0.0000012523876,0.00005953159,0.0002008917,0.000037561644],"category_scores_gemma":[0.00006627312,0.00007041039,0.00009882876,0.0003104671,0.00014115177,0.000033307148,0.000009192952,0.00013908793,2.9570064e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004687153,0.000059530594,0.0012005598,0.000024132281,0.00009788301,9.179923e-8,0.0011461822,0.0003416603,0.9798107,0.00038832924,0.0000017084792,0.016460493],"study_design_scores_gemma":[0.00079324574,0.00027973036,0.003809787,0.000033634744,0.00012640639,7.363435e-7,0.0005389691,0.000491284,0.99322623,0.0004894351,0.00015211182,0.000058434143],"about_ca_topic_score_codex":0.000056028013,"about_ca_topic_score_gemma":0.0000053310678,"teacher_disagreement_score":0.34133413,"about_ca_system_score_codex":0.000016200009,"about_ca_system_score_gemma":0.000014509567,"threshold_uncertainty_score":0.28712523},"labels":[],"label_agreement":null},{"id":"W2749918987","doi":"10.1007/978-1-4939-7253-1_26","title":"Protocol for Exosome Isolation from Small Volume of Ovarian Follicular Fluid: Evaluation of Ultracentrifugation and Commercial Kits","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Women's College Hospital; CReATe Fertility Centre","funders":"","keywords":"Follicular fluid; Ultracentrifuge; Oocyte; Follicle; Exosome; Microvesicles; Isolation (microbiology); Follicular phase; Ovarian follicle; Extracellular vesicles; Chemistry; Cell biology; Andrology; Biology; Chromatography; Biochemistry; Bioinformatics; Endocrinology; Medicine; microRNA; Embryo","score_opus":0.06434677493912906,"score_gpt":0.44139586031047984,"score_spread":0.3770490853713508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2749918987","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35299593,0.00018717001,0.6266114,0.00007256145,0.00007695278,0.019936543,0.0000519696,0.0000033646206,0.00006407629],"genre_scores_gemma":[0.42880142,0.0000062409526,0.55303097,0.000041370622,0.00009330444,0.017717289,0.00026851756,0.00002889862,0.000011996401],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976408,0.001127519,0.0004906863,0.00043312606,0.000115733514,0.00019217489],"domain_scores_gemma":[0.99834377,0.000056915957,0.00053257606,0.0007048027,0.00030880363,0.00005314101],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023490149,0.00016798111,0.00029894977,0.000078896905,0.00007673919,0.000015265925,0.00030607564,0.0003421645,0.00001401777],"category_scores_gemma":[0.0023071195,0.00017516674,0.00011359424,0.000046727306,0.00023071162,0.000007927824,0.00013401857,0.00007360201,2.871705e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000292146,0.00010592686,0.025785156,0.00005415792,0.000056628152,6.176692e-7,0.000052807893,0.00009742994,0.9431725,0.00058163586,0.0000075767566,0.029793395],"study_design_scores_gemma":[0.0036475465,0.0002988681,0.04225238,0.00003803357,0.00010173569,0.000001408307,0.0000143364505,0.006293138,0.935241,0.010981197,0.000946713,0.00018368296],"about_ca_topic_score_codex":0.00010203117,"about_ca_topic_score_gemma":0.00004147768,"teacher_disagreement_score":0.0758055,"about_ca_system_score_codex":0.000020315169,"about_ca_system_score_gemma":0.000106401516,"threshold_uncertainty_score":0.7143092},"labels":[],"label_agreement":null},{"id":"W2750198314","doi":"10.1007/978-1-4939-7237-1_5","title":"Visualizing Virus-Derived dsRNA Using Antibody-Independent and -Dependent Methods","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Acridine orange; Virus; Virology; RNA silencing; Viral replication; Biology; Antibody; RNA; Immunocytochemistry; Staining; Gene; Genetics; RNA interference","score_opus":0.07322695515056278,"score_gpt":0.5339853631834262,"score_spread":0.4607584080328634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750198314","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39447698,0.0006918796,0.60301,0.0000702293,0.00029890254,0.0002563224,0.0000037003372,0.00002601113,0.0011659933],"genre_scores_gemma":[0.17534272,0.00022559766,0.82405525,0.00020924749,0.000047957976,0.000021612595,0.000008034316,0.00003470526,0.00005487014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971229,0.0014259752,0.00037951054,0.0005653421,0.00009420195,0.00041209804],"domain_scores_gemma":[0.9986898,0.00015384067,0.00020727476,0.000744239,0.000059088143,0.00014577819],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021277496,0.00025806023,0.00059753505,0.00025358153,0.0003164504,0.00006058978,0.00015775135,0.00031165252,0.00006721298],"category_scores_gemma":[0.00076860504,0.00022390623,0.00012063698,0.00008732129,0.00024561983,0.000063611056,0.00029961212,0.00033307928,0.000005661671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000427034,0.00011799784,0.017977376,0.000018568518,0.00015752563,0.00020563207,0.00006384312,0.000003926398,0.7888934,0.0006311042,3.5671104e-7,0.19188756],"study_design_scores_gemma":[0.002877916,0.00027178766,0.023941863,0.00010136797,0.00025856335,0.00039892417,0.000071073926,0.0017123441,0.96146905,0.0047355136,0.0038183131,0.00034328277],"about_ca_topic_score_codex":0.0011402005,"about_ca_topic_score_gemma":0.000039836737,"teacher_disagreement_score":0.22104526,"about_ca_system_score_codex":0.00011911576,"about_ca_system_score_gemma":0.00007220905,"threshold_uncertainty_score":0.9130631},"labels":[{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"opus","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2750699804","doi":"10.1007/978-1-4939-7249-4_10","title":"Investigating Gene Function in Cereal Rust Fungi by Plant-Mediated Virus-Induced Gene Silencing","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant and Fungal Interactions Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Gene silencing; Gene; Biology; Function (biology); Genetics","score_opus":0.049198965814738926,"score_gpt":0.3981847255708662,"score_spread":0.3489857597561273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750699804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93037456,0.0006157283,0.067086965,0.00008585692,0.0004291797,0.00022841313,0.00012906625,0.000015118963,0.0010351317],"genre_scores_gemma":[0.8977182,0.00054375426,0.099275105,0.00036918005,0.00020757949,0.000109679124,0.0015828299,0.00004897851,0.00014467923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741805,0.00089555694,0.00040760523,0.0006303981,0.000104369035,0.0005440532],"domain_scores_gemma":[0.99891376,0.000117550524,0.0001907224,0.0005994829,0.000059637918,0.000118838216],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012643731,0.0002429648,0.00030647116,0.00021643307,0.00018800065,0.00005938328,0.00048089097,0.00050023984,0.00002733259],"category_scores_gemma":[0.0013230321,0.00024533042,0.00008425136,0.00013330525,0.00014107859,0.000012143499,0.00031036485,0.000485802,0.000013917629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009447801,0.000052600026,0.010634505,0.000008541948,0.0000446107,0.000026217867,0.00003233717,0.00003300587,0.9797777,0.000026661632,0.00015217204,0.009117193],"study_design_scores_gemma":[0.00065016584,0.0002652096,0.0042907535,0.00001903549,0.000009552989,0.000032405853,0.000039646067,0.00092190097,0.99053484,0.00015225467,0.0028155323,0.0002687003],"about_ca_topic_score_codex":0.0012435066,"about_ca_topic_score_gemma":0.0005987492,"teacher_disagreement_score":0.032656323,"about_ca_system_score_codex":0.00005655769,"about_ca_system_score_gemma":0.00009849862,"threshold_uncertainty_score":0.9999999},"labels":[],"label_agreement":null},{"id":"W2753919398","doi":"10.1007/978-1-4939-7244-9_24","title":"Intercellular Prion-Like Conversion and Transmission of Cu/Zn Superoxide Dismutase (SOD1) in Cell Culture","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of British Columbia Hospital","funders":"Canadian Institutes of Health Research; Temerty Family Foundation","keywords":"SOD1; Amyotrophic lateral sclerosis; Superoxide dismutase; Cell; Intracellular; Cell culture; Cell biology; Mutant; Mutation; Biology; Dismutase; Chemistry; Molecular biology; Gene; Biochemistry; Genetics; Disease; Medicine; Pathology; Enzyme","score_opus":0.03053929714129881,"score_gpt":0.4024080275039775,"score_spread":0.37186873036267865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2753919398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87319005,0.0015451418,0.12386994,0.0006842587,0.000072681025,0.00039796543,0.000003975582,0.00000819953,0.00022781335],"genre_scores_gemma":[0.76982224,0.0010711493,0.22872943,0.00014694974,0.000013177117,0.000012364858,0.000022484073,0.000017674023,0.00016455533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801326,0.00083032757,0.00033787865,0.00039716068,0.000120018856,0.00030134068],"domain_scores_gemma":[0.99916154,0.00008060638,0.00009045826,0.0004883322,0.00004998464,0.00012910072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010460201,0.00016190432,0.00046777446,0.00016552015,0.000051319086,0.000010877371,0.0002444487,0.0003324152,0.00007462962],"category_scores_gemma":[0.0002780061,0.00011997482,0.00008103048,0.00009212017,0.00037741102,0.00004496757,0.0002159357,0.0004350442,0.0000026528971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025482423,0.00010424814,0.032752402,0.000138742,0.000011968512,0.00014011099,0.00046191056,0.0000027549488,0.9479942,0.000059124453,0.0000135450455,0.01806618],"study_design_scores_gemma":[0.0046112053,0.0008726046,0.061619245,0.00036671705,0.000038301878,0.000031251122,0.00014734789,0.0021261575,0.9246044,0.0012320437,0.0041171545,0.0002335644],"about_ca_topic_score_codex":0.00037816557,"about_ca_topic_score_gemma":0.000007733658,"teacher_disagreement_score":0.10485949,"about_ca_system_score_codex":0.000057962585,"about_ca_system_score_gemma":0.000041883803,"threshold_uncertainty_score":0.48924312},"labels":[],"label_agreement":null},{"id":"W2755019340","doi":"10.1007/978-1-4939-7337-8_11","title":"Targeted Mutagenesis in Hexaploid Bread Wheat Using the TALEN and CRISPR/Cas Systems","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"National Key Research and Development Program of China","keywords":"Transcription activator-like effector nuclease; CRISPR; Genome editing; Palindrome; Biology; Genetics; Cas9; Genome; Effector; Computational biology; Mutagenesis; Gene; Mutation; Cell biology","score_opus":0.024551460406294624,"score_gpt":0.44068460581914626,"score_spread":0.4161331454128516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755019340","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43298572,0.007650031,0.5586267,0.00009651498,0.00028528768,0.00021818157,0.000006936617,0.000006082197,0.00012451888],"genre_scores_gemma":[0.8661868,0.0004063024,0.13303615,0.00010973797,0.00010223825,0.000045314657,0.000015138979,0.00003595699,0.00006238618],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824655,0.00056247227,0.00029060262,0.00047285054,0.000054766162,0.0003727646],"domain_scores_gemma":[0.99899113,0.00004455207,0.0000951337,0.0007785749,0.000033517634,0.000057077206],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010520869,0.00021606851,0.00029154288,0.00009571962,0.00013112769,0.000055551693,0.00039773996,0.000287878,0.0000033841097],"category_scores_gemma":[0.00038624322,0.00017732788,0.00006648477,0.000071759634,0.00020874628,0.0000036762492,0.00032964576,0.0001649541,6.1622694e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020631918,0.000014623932,0.012744322,0.000024442374,0.000029218922,0.000021557487,0.000058118363,0.0014116653,0.9814317,0.00011774101,0.000007286204,0.0041186656],"study_design_scores_gemma":[0.00071001187,0.000116681644,0.013058205,0.00003488776,0.000026985346,0.000113217946,0.00016657742,0.0055626417,0.9763736,0.0002786045,0.0032106356,0.00034796563],"about_ca_topic_score_codex":0.00061985827,"about_ca_topic_score_gemma":0.00012370636,"teacher_disagreement_score":0.43320104,"about_ca_system_score_codex":0.000021173682,"about_ca_system_score_gemma":0.00003166828,"threshold_uncertainty_score":0.7231221},"labels":[],"label_agreement":null},{"id":"W2755387723","doi":"10.1007/978-1-4939-7312-5_10","title":"Large-Scale Transient Transfection of Suspension Mammalian Cells for VLP Production","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Transient (computer programming); Transfection; Suspension (topology); Suspension culture; Scale (ratio); Production (economics); Cell biology; Chemistry; Cell culture; Biology; Computer science; Physics; Mathematics; Genetics","score_opus":0.022707872916082075,"score_gpt":0.36972218575986665,"score_spread":0.3470143128437846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755387723","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4946396,0.00019551045,0.50406617,0.0001425398,0.00051596994,0.0002752521,0.000015436828,0.0000034556458,0.00014607242],"genre_scores_gemma":[0.8159424,0.0001548084,0.18334019,0.00009657249,0.00011139347,0.0000667795,0.000072914656,0.000021705897,0.0001932135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986168,0.0003091945,0.0002882867,0.00047319743,0.000045596375,0.00026692162],"domain_scores_gemma":[0.99912333,0.00001384613,0.00013147393,0.00058204436,0.000112477464,0.000036825255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092876743,0.00014954801,0.00024330805,0.000080752056,0.000099718985,0.000010749654,0.000255779,0.0002721843,0.0000092942855],"category_scores_gemma":[0.00016321697,0.00014403331,0.00017399427,0.00004073202,0.00012713105,0.0000047690096,0.000048707047,0.00008638181,0.0000011873369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002241818,0.00008724671,0.00044243992,0.000033837496,0.000025043442,0.0000012481973,0.000099755234,0.00010931371,0.988611,0.00009746049,0.000082690494,0.010185806],"study_design_scores_gemma":[0.0006176836,0.0006790022,0.00089254946,0.000017107135,0.000024126655,0.0000060601515,0.00008069953,0.00014302426,0.9891427,0.000784385,0.0074587488,0.00015392441],"about_ca_topic_score_codex":0.000039702736,"about_ca_topic_score_gemma":0.00017358457,"teacher_disagreement_score":0.32130283,"about_ca_system_score_codex":0.000010853932,"about_ca_system_score_gemma":0.000029479845,"threshold_uncertainty_score":0.5873508},"labels":[],"label_agreement":null},{"id":"W2755555606","doi":"10.1007/978-1-4939-7234-0_15","title":"Orthotopic Mouse Models of Urothelial Cancer","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bladder cancer; In vivo; Cancer research; Urothelial cancer; Preclinical testing; Human bladder; Cancer; Immune system; Urothelial Cell; Medicine; Biology; Immunology; Internal medicine; Bioinformatics; Genetics","score_opus":0.049762812811982464,"score_gpt":0.47181281912942513,"score_spread":0.42205000631744266,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2755555606","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61844915,0.0021233906,0.37598518,0.00015522608,0.00017711842,0.00034557196,0.00008533227,0.0000061729115,0.0026728383],"genre_scores_gemma":[0.7488188,0.0012477911,0.2485084,0.0001739186,0.00010114708,0.0002294685,0.000048046975,0.000036539666,0.00083588954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987855,0.00031117845,0.00019717461,0.00035313974,0.00006425497,0.00028876157],"domain_scores_gemma":[0.99900216,0.000013088991,0.00012175864,0.0007434333,0.000057087767,0.00006246302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003608846,0.00013342257,0.00022913743,0.000064199725,0.00006493426,0.000013193685,0.00042364674,0.00017353236,0.0000291025],"category_scores_gemma":[0.00020106004,0.00011997481,0.00010449328,0.00003447947,0.0002310561,0.000003529564,0.00025529618,0.000097409255,0.0000011874342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010950162,0.000055641518,0.012595064,0.000012261162,0.00007610669,0.000009723974,0.000013721853,0.000097761134,0.96356994,0.0010979364,0.000017970493,0.022344358],"study_design_scores_gemma":[0.0010006877,0.0002186994,0.00093577354,0.0000088777215,0.000010305019,0.0000029291205,0.0000047613953,0.00014644684,0.9897039,0.0046777334,0.003164499,0.00012541276],"about_ca_topic_score_codex":0.0017248224,"about_ca_topic_score_gemma":0.0005869005,"teacher_disagreement_score":0.13036963,"about_ca_system_score_codex":0.000019291954,"about_ca_system_score_gemma":0.00011266269,"threshold_uncertainty_score":0.48924306},"labels":[],"label_agreement":null},{"id":"W2756439426","doi":"10.1007/978-1-4939-7240-1_20","title":"Measuring Cyclic Diguanylate (c-di-GMP)-Specific Phosphodiesterase Activity Using the MANT-c-di-GMP Assay","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phosphodiesterase function and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Cyclic gmp; Phosphodiesterase; Chemistry; Biochemistry; Enzyme","score_opus":0.07400311417006825,"score_gpt":0.38414692418129853,"score_spread":0.31014381001123026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2756439426","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4944879,0.0012323703,0.5021663,0.0002647105,0.0009490463,0.00028485697,0.00000908291,0.000020612832,0.00058516266],"genre_scores_gemma":[0.9346138,0.0003895559,0.06394403,0.00031470563,0.0002607811,0.000059882484,0.000041749718,0.00006583273,0.00030965378],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962688,0.0016929543,0.00042520917,0.00085502595,0.00015660492,0.00060136954],"domain_scores_gemma":[0.9976215,0.00010141907,0.0004118825,0.001646004,0.00010716055,0.000112048365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021558865,0.00040954212,0.00043307594,0.00011448034,0.00067566166,0.00015076634,0.00072519836,0.00047813196,0.000022749959],"category_scores_gemma":[0.0005427559,0.0003215768,0.00025428444,0.00012045833,0.0005124682,0.000020054413,0.0005549032,0.0003933443,0.000007178472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018743219,0.00006804686,0.00856654,0.000012974684,0.000085951986,0.000023536746,0.0000621996,0.00041154271,0.95924574,0.00028246516,0.000026474527,0.031027114],"study_design_scores_gemma":[0.0009992104,0.0001208217,0.01943823,0.00003756151,0.000037204463,0.000062913845,0.000042548785,0.0019785499,0.95879894,0.0008362241,0.017169751,0.00047805932],"about_ca_topic_score_codex":0.00014230164,"about_ca_topic_score_gemma":0.00007736345,"teacher_disagreement_score":0.4401259,"about_ca_system_score_codex":0.000080453254,"about_ca_system_score_gemma":0.00007224523,"threshold_uncertainty_score":0.99992365},"labels":[],"label_agreement":null},{"id":"W27584433","doi":"10.1007/978-1-61779-949-5_16","title":"Activity of Small RNAs on the Stability of Targeted mRNAs In Vivo","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Northern blot; Biology; Messenger RNA; Blot; Transfer RNA; RNA; Transcription (linguistics); Cell biology; Molecular biology; Gene; Genetics; Computational biology","score_opus":0.03982451049091879,"score_gpt":0.3471395410758446,"score_spread":0.3073150305849258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W27584433","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77479863,0.0005853159,0.2234079,0.000093380164,0.00011776379,0.00026866098,0.000012831462,0.000002627813,0.00071287184],"genre_scores_gemma":[0.8579669,0.000046253634,0.14177817,0.00010543047,0.000024410167,0.00004800286,0.0000036332456,0.000014322996,0.0000128977335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961633,0.0028378344,0.00033410554,0.00027888428,0.00006571786,0.0003201657],"domain_scores_gemma":[0.9989165,0.00023007928,0.00018273582,0.0005868875,0.00004212169,0.000041654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033202225,0.00016323605,0.00033147627,0.000083104416,0.00001647616,0.0000017820363,0.0003017099,0.00030031428,0.000069203845],"category_scores_gemma":[0.0012218915,0.000120416196,0.00012546396,0.00017936814,0.00017628323,0.000001941298,0.00013757456,0.00015070334,7.0977717e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016876984,0.00018756434,0.008060299,0.00001888749,0.000027104827,5.391936e-7,0.000065137676,0.000009042429,0.9808116,0.0031008883,0.000002776264,0.007547409],"study_design_scores_gemma":[0.0002286111,0.0002765975,0.0021542355,0.000012611829,0.000006995905,0.0000015110822,0.000040571034,0.000014851617,0.99427456,0.002038099,0.0008339239,0.000117436175],"about_ca_topic_score_codex":0.0000983013,"about_ca_topic_score_gemma":0.000030655894,"teacher_disagreement_score":0.083168216,"about_ca_system_score_codex":0.000016109714,"about_ca_system_score_gemma":0.0000408901,"threshold_uncertainty_score":0.491043},"labels":[],"label_agreement":null},{"id":"W2760997929","doi":"10.1007/978-1-4939-7401-6_8","title":"In Vitro Tumorigenic Assay: Colony Forming Assay for Cancer Stem Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":151,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"China Scholarship Council; Cancerfonden","keywords":"Clonogenic assay; In vitro; Cancer stem cell; Stem cell; Biology; Cancer cell; Agarose; Cancer; Population; Molecular biology; Cancer research; Cell biology; Medicine; Biochemistry; Genetics","score_opus":0.05024480712806854,"score_gpt":0.44138499712075113,"score_spread":0.3911401899926826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2760997929","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046163205,0.003679121,0.9433693,0.002059495,0.0020290108,0.0013235364,0.000073692645,0.00002161024,0.0012809712],"genre_scores_gemma":[0.052992024,0.00036577642,0.94276965,0.0015293778,0.00021344794,0.00062604004,0.0000137239895,0.000054675125,0.0014352696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979872,0.00056417845,0.00038504356,0.000468181,0.00007820175,0.0005171608],"domain_scores_gemma":[0.99874145,0.00028162278,0.00021219229,0.0006046192,0.000065004606,0.00009511909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031742135,0.00019786762,0.0006789602,0.00018752913,0.00008627382,0.000018814962,0.00025425546,0.00022167139,0.000050569204],"category_scores_gemma":[0.00032153132,0.00017651512,0.00018936221,0.00010794402,0.00014918401,0.000041169966,0.000118462194,0.0002722595,0.0000030891833],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027786553,0.000047525267,0.00087629125,0.00007597113,0.000047264064,0.00007100637,0.00006438752,0.0000065338454,0.82983315,0.0003511511,0.000082678846,0.16826619],"study_design_scores_gemma":[0.0019038579,0.00014589439,0.00017870057,0.00004462781,0.00007771931,0.00001321141,0.000037480986,0.00038190422,0.9034309,0.0015270005,0.09208614,0.00017259127],"about_ca_topic_score_codex":0.00090018567,"about_ca_topic_score_gemma":0.00031945013,"teacher_disagreement_score":0.16809359,"about_ca_system_score_codex":0.0002366968,"about_ca_system_score_gemma":0.00019919856,"threshold_uncertainty_score":0.7198078},"labels":[],"label_agreement":null},{"id":"W2761188727","doi":"10.1007/978-1-4939-7380-4_9","title":"ChIP-re-ChIP: Co-occupancy Analysis by Sequential Chromatin Immunoprecipitation","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Chromatin immunoprecipitation; ChIP-on-chip; ChIP-sequencing; Chromatin; Chip; Immunoprecipitation; Epigenetics; ChIA-PET; Computational biology; Computer science; DNA; Chromatin remodeling; Biology; Genetics; Gene; Gene expression; Promoter; Telecommunications","score_opus":0.015796059801195663,"score_gpt":0.38585082715973285,"score_spread":0.3700547673585372,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761188727","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52145344,0.00077288103,0.47557902,0.00007248922,0.0001975895,0.00016934348,0.0000818224,0.000010273361,0.0016631627],"genre_scores_gemma":[0.64174455,0.00021730995,0.3561239,0.00019968163,0.00007523025,0.000056132183,0.0013204501,0.000038617145,0.00022416846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975126,0.00078228797,0.00049446925,0.0006797699,0.000091717404,0.00043918903],"domain_scores_gemma":[0.9981327,0.00003656371,0.0004064696,0.0012782655,0.00006356734,0.00008239844],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011015857,0.00029500393,0.0004579426,0.00016663256,0.0002330146,0.000090469366,0.0007827325,0.00044395128,0.00006347075],"category_scores_gemma":[0.00043225964,0.00030541926,0.0002905569,0.00013733593,0.0002488105,0.000005792896,0.0002923272,0.00019797347,0.000008297102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036180154,0.000058646994,0.010957093,0.00001042451,0.00042087032,0.0000050206672,0.000049617367,0.00015601254,0.98134303,0.00032646745,0.00012983539,0.0065067825],"study_design_scores_gemma":[0.0012794217,0.00034905018,0.018828934,0.0000109295825,0.00027150734,0.000009551921,0.000057254558,0.0041418485,0.9633138,0.0033374943,0.007721318,0.0006788764],"about_ca_topic_score_codex":0.00019520044,"about_ca_topic_score_gemma":0.00012310124,"teacher_disagreement_score":0.120291114,"about_ca_system_score_codex":0.000039497172,"about_ca_system_score_gemma":0.00006355675,"threshold_uncertainty_score":0.9999398},"labels":[],"label_agreement":null},{"id":"W2761744082","doi":"10.1007/978-1-4939-7401-6_1","title":"Introduction to Cancer Stem Cells: Past, Present, and Future","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Cancer stem cell; Cancer; Stem cell; Cancer research; Cancer cell; Biology; Population; Limiting; Medicine; Genetics","score_opus":0.09393649869264815,"score_gpt":0.49645273039409654,"score_spread":0.4025162317014484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2761744082","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000001241826,0.9590407,0.034279797,0.002960831,0.0022938137,0.0010985716,0.000045349185,0.000016549018,0.0002631275],"genre_scores_gemma":[1.2767931e-8,0.80873567,0.18206295,0.00015685703,0.007616272,0.00030290874,0.000026641754,0.000045386772,0.0010533043],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99718237,0.0010979294,0.0004606835,0.0008328461,0.0000793759,0.000346769],"domain_scores_gemma":[0.9985937,0.00006406205,0.00026642976,0.00085523323,0.00005573452,0.00016484488],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010128301,0.00037267833,0.0020099233,0.0003255831,0.000045888803,0.000020564374,0.00019617812,0.0004987789,0.00010419293],"category_scores_gemma":[0.000025056679,0.00028080065,0.00027616625,0.00021276217,0.00012186615,0.000014039573,0.00019732407,0.0005099099,0.000008499178],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021513615,0.000022162993,0.000003477433,0.003983018,0.00018117548,0.000036086156,0.000024851284,3.623226e-7,0.0014941442,0.00007092859,0.0031102188,0.99105203],"study_design_scores_gemma":[0.000249629,0.0001276767,0.0000016099814,0.0009366249,0.0008224741,0.00007343539,0.000011630004,6.5705905e-7,0.0012873331,0.000036468096,0.99621564,0.0002368286],"about_ca_topic_score_codex":0.00011625391,"about_ca_topic_score_gemma":0.0000103909615,"teacher_disagreement_score":0.9931054,"about_ca_system_score_codex":0.00014082421,"about_ca_system_score_gemma":0.00018254443,"threshold_uncertainty_score":0.9999644},"labels":[],"label_agreement":null},{"id":"W2762970624","doi":"10.1007/978-1-4939-6981-4_21","title":"Testing Experimental Therapies in a Guinea Pig Model for Hemorrhagic Fever","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Canadian Institutes of Health Research","keywords":"Viral hemorrhagic fever; Virology; Guinea pig; Animal model; Ebola virus; Medicine; Monoclonal antibody; Virus; Immunology; Biology; Antibody; Internal medicine","score_opus":0.15578724863211815,"score_gpt":0.5310573392077236,"score_spread":0.37527009057560545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762970624","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32263392,0.0006570403,0.6741438,0.0004626497,0.000077445206,0.00041160392,0.0000028950928,0.000014844376,0.0015958289],"genre_scores_gemma":[0.4223383,0.0000045181314,0.57706827,0.00021023983,0.000026421276,0.00012965967,0.0000036344097,0.000012808952,0.00020615228],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989588,0.00022188164,0.00020031416,0.00027146572,0.000046748333,0.00030078812],"domain_scores_gemma":[0.99936813,0.00013442073,0.000053146778,0.00034618538,0.00005394491,0.000044176923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009909599,0.00011274045,0.00027753942,0.00017138726,0.00010181835,0.000020914422,0.00013985853,0.00013399526,0.000020688407],"category_scores_gemma":[0.0010859863,0.00009227543,0.00007308346,0.00008602381,0.00014774535,0.000031181426,0.00011718054,0.00018960585,0.0000021971812],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006285453,0.00010489438,0.01579832,0.000016104525,0.000014142406,0.00002691712,0.00012937833,0.00007362838,0.94671816,0.00059236714,0.0000097759585,0.036453467],"study_design_scores_gemma":[0.0037665688,0.0006467021,0.008979998,0.00006158402,0.00001498549,0.000071116076,0.00015303023,0.43630195,0.53886265,0.010307225,0.0005883332,0.00024583534],"about_ca_topic_score_codex":0.00026007433,"about_ca_topic_score_gemma":0.000021303724,"teacher_disagreement_score":0.4362283,"about_ca_system_score_codex":0.000065807755,"about_ca_system_score_gemma":0.00005623343,"threshold_uncertainty_score":0.3762883},"labels":[],"label_agreement":null},{"id":"W2762986013","doi":"10.1007/978-1-4939-7371-2_11","title":"Single EDL Myofiber Isolation for Analyses of Quiescent and Activated Muscle Stem Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research","keywords":"Cell biology; Myocyte; Satellite; Progenitor cell; Biology; Regeneration (biology); Stem cell; Skeletal muscle; Myogenesis; Anatomy","score_opus":0.056825781858443045,"score_gpt":0.4207315361006832,"score_spread":0.36390575424224014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2762986013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6414881,0.0007705411,0.35707825,0.00006082549,0.00013819127,0.00020958582,0.000012500418,0.0000040702625,0.00023794729],"genre_scores_gemma":[0.8650558,0.00008655925,0.13460942,0.00010020333,0.000022682758,0.000029948902,0.00003738126,0.000014773841,0.000043216627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988219,0.00035429007,0.00022838773,0.00036525194,0.000023704073,0.0002064484],"domain_scores_gemma":[0.9991813,0.000062312516,0.00021218299,0.00045562393,0.000058265705,0.00003031938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000387726,0.00013925855,0.00025424155,0.000063116735,0.00009058903,0.000010198668,0.0001949283,0.00026059322,0.0000057107177],"category_scores_gemma":[0.00017942047,0.00013086828,0.000090254776,0.00003630083,0.00025472758,0.000004283148,0.00014550069,0.00006272666,2.9552461e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019078019,0.00006967841,0.0008807779,0.00002806801,0.00005569897,3.25695e-7,0.000021716465,0.000040082123,0.97430474,0.00015684738,0.00002019257,0.024231076],"study_design_scores_gemma":[0.00072214287,0.00048016538,0.002415037,0.000010902775,0.00002464234,7.1013443e-7,0.000040772957,0.000090319976,0.9935633,0.0011933652,0.0013196243,0.00013903626],"about_ca_topic_score_codex":0.00004767614,"about_ca_topic_score_gemma":0.0000132891855,"teacher_disagreement_score":0.22356772,"about_ca_system_score_codex":0.0000067575065,"about_ca_system_score_gemma":0.00002434969,"threshold_uncertainty_score":0.5336654},"labels":[],"label_agreement":null},{"id":"W2763718814","doi":"10.1007/978-1-4939-6981-4","title":"Hemorrhagic Fever Viruses","year":2017,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Université de Lausanne; Universidad de Buenos Aires; Chinese Academy of Agricultural Sciences; Public Health Agency; Chinese Academy of Sciences; University of Pennsylvania; U.S. Army; Consejo Nacional de Investigaciones Científicas y Técnicas; U.S. Army Medical Research Institute of Infectious Diseases; University of Minnesota; National Institutes of Health; Public Health Agency of Canada","keywords":"Virology; Pandemic; Viral hemorrhagic fever; Medicine; Biology; Coronavirus disease 2019 (COVID-19); Virus; Pathology; Infectious disease (medical specialty); Disease","score_opus":0.08504417935432564,"score_gpt":0.506943310641803,"score_spread":0.42189913128747736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2763718814","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013186777,0.0035918476,0.2966361,0.00031206434,0.00060858054,0.0005970067,0.000021892687,0.000053670876,0.698047],"genre_scores_gemma":[0.000037165028,0.0002975755,0.37145975,0.0012946726,0.0002845637,0.00006287768,0.00009590012,0.000076604854,0.6263909],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979163,0.0006163792,0.0003482504,0.0005623924,0.00012442903,0.0004322737],"domain_scores_gemma":[0.9985609,0.00017053456,0.00014704114,0.0008875485,0.00011190288,0.000122075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011890634,0.00030601164,0.00084228825,0.00050713174,0.00008424785,0.000024997882,0.0002696135,0.0009539197,0.00065218174],"category_scores_gemma":[0.0007309239,0.00025485439,0.00029123062,0.00007780845,0.00039288992,0.000018870272,0.00026883304,0.0011403679,0.00018142501],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020432177,0.00024904066,0.0022016938,0.00051878404,0.000570293,0.0029370037,0.00004711138,0.000003450933,0.537127,0.015794838,0.017251087,0.42309535],"study_design_scores_gemma":[0.0009256371,0.00038219354,0.00023657757,0.00018632237,0.00011808727,0.00028452917,0.0000028026418,0.00006434866,0.030320419,0.027034178,0.9400896,0.00035533946],"about_ca_topic_score_codex":0.00011428866,"about_ca_topic_score_gemma":0.000018556098,"teacher_disagreement_score":0.92283845,"about_ca_system_score_codex":0.00023094924,"about_ca_system_score_gemma":0.00052187615,"threshold_uncertainty_score":0.99999034},"labels":[],"label_agreement":null},{"id":"W2764691768","doi":"10.1007/978-1-61779-191-8_9","title":"Optimization of the Caco-2 Permeability Assay to Screen Drug Compounds for Intestinal Absorption and Efflux","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research; Occupational Cancer Research Centre","funders":"","keywords":"Efflux; In vitro; In vivo; Bioavailability; Chemistry; In silico; Caco-2; Intestinal permeability; Membrane permeability; Permeability (electromagnetism); Drug; Pharmacology; Chromatography; Membrane; Biochemistry; Biology; Biotechnology; Immunology","score_opus":0.033315378794662405,"score_gpt":0.3578865281724839,"score_spread":0.3245711493778215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2764691768","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12310132,0.00005836641,0.8754523,0.00023303274,0.00010611538,0.00053254154,0.000006475216,0.000009832227,0.0005000483],"genre_scores_gemma":[0.22559224,0.0000036457564,0.77412665,0.00016246879,0.0000106632515,0.00003003786,0.000012924978,0.000008664209,0.00005269992],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898624,0.0003751151,0.00023596782,0.00021693947,0.000049214977,0.00013653592],"domain_scores_gemma":[0.9994788,0.0001127749,0.000061470535,0.00021423244,0.00008940193,0.000043326687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015687281,0.00009158216,0.00024444188,0.000074103635,0.000027285558,0.0000016461587,0.00008885767,0.00008765011,0.000017759541],"category_scores_gemma":[0.00034601698,0.000061960825,0.00006754752,0.00014538631,0.00013193858,0.0000095049045,0.00003057047,0.00009497772,1.8465592e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036861346,0.00012203472,0.04730974,0.000116016236,0.00002787926,0.0000018526347,0.000656358,0.00020177534,0.940618,0.004616904,0.000008790332,0.0059520802],"study_design_scores_gemma":[0.0018160474,0.0006169239,0.09281504,0.00017234388,0.00016060898,0.000024109895,0.00024070687,0.006050466,0.8841744,0.013335016,0.00037673456,0.00021758756],"about_ca_topic_score_codex":0.00007874853,"about_ca_topic_score_gemma":0.000038616752,"teacher_disagreement_score":0.102490924,"about_ca_system_score_codex":0.000024409741,"about_ca_system_score_gemma":0.000032045726,"threshold_uncertainty_score":0.25266892},"labels":[],"label_agreement":null},{"id":"W2765319241","doi":"10.1007/978-1-4939-7306-4_26","title":"Assays to Study Repair of Inducible DNA Double-Strand Breaks at Telomeres","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Telomere; Subtelomere; Biology; Chromosome; DNA; Genetics; DNA replication; Circular bacterial chromosome; Genome; Computational biology; Cell biology; Gene","score_opus":0.06741076263375222,"score_gpt":0.4556589840615589,"score_spread":0.3882482214278067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765319241","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9754061,0.0003964134,0.019369375,0.0003685408,0.00033244418,0.0009842805,0.000009921473,0.00006105371,0.003071833],"genre_scores_gemma":[0.7373695,0.000028617613,0.26188576,0.00027911257,0.000050058174,0.000057674653,0.0000067318997,0.00002965855,0.0002928853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972797,0.00074762065,0.0005962463,0.0007251076,0.00018669442,0.00046464344],"domain_scores_gemma":[0.99758273,0.0001843858,0.00022893905,0.0016831962,0.00012150869,0.00019921953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023224119,0.0002684743,0.00086594233,0.000346111,0.00015675084,0.000014397931,0.00045991698,0.00027870567,0.00011513132],"category_scores_gemma":[0.0011127135,0.00022876826,0.00018087523,0.0002421101,0.00027931124,0.00003702435,0.00038399658,0.00030187648,0.000013839562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069810863,0.00043059175,0.29333648,0.00004779998,0.000145274,0.00024556412,0.0006168883,0.0000035456642,0.6815894,0.00027704745,0.00004213531,0.022567112],"study_design_scores_gemma":[0.0041673253,0.0013759079,0.31335908,0.000065601176,0.0001120343,0.000065810695,0.00027795325,0.000020630201,0.6773435,0.00046052854,0.0024696228,0.00028202203],"about_ca_topic_score_codex":0.0007356588,"about_ca_topic_score_gemma":0.00020270154,"teacher_disagreement_score":0.24251638,"about_ca_system_score_codex":0.00006581453,"about_ca_system_score_gemma":0.00008363675,"threshold_uncertainty_score":0.9328899},"labels":[],"label_agreement":null},{"id":"W2765324990","doi":"10.1007/978-1-4939-7306-4_27","title":"Telomerase RNA Imaging in Budding Yeast and Human Cells by Fluorescent In Situ Hybridization","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Université du Québec à Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"Telomerase; Telomerase reverse transcriptase; Telomerase RNA component; Telomere; RNA; In situ hybridization; Biology; Cell biology; Ribonucleoprotein; Molecular biology; Yeast; Budding; Biochemistry; Gene expression; DNA; Gene","score_opus":0.01872371621994575,"score_gpt":0.3880453303059561,"score_spread":0.3693216140860104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765324990","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94550645,0.00090849766,0.052067913,0.0004262623,0.00017206604,0.00032820948,0.0000055521778,0.000020093765,0.00056496926],"genre_scores_gemma":[0.8881594,0.00017459813,0.11118999,0.00033831122,0.00003211764,0.000018057892,0.000029235709,0.000024735567,0.000033576634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980318,0.00055820914,0.00041168035,0.00050767214,0.00008568873,0.00040498123],"domain_scores_gemma":[0.9992001,0.000069214344,0.0001395743,0.00046304203,0.000031149717,0.00009690112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011588346,0.00019913424,0.000439668,0.00039231442,0.0000900698,0.000034322813,0.00018765344,0.00012828698,0.000014236236],"category_scores_gemma":[0.0005088933,0.0001978488,0.000041366617,0.00015846695,0.00023136908,0.00006552531,0.0001433022,0.00032019874,0.000002322536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025167275,0.00007664121,0.17408404,0.000031912972,0.0000045480433,0.00024717272,0.00014619417,0.0000029978887,0.7859422,0.00020336041,0.000019470093,0.039216287],"study_design_scores_gemma":[0.0018158356,0.00005884797,0.09320541,0.00016839885,0.000013285312,0.000029187604,0.00010739833,0.0003739926,0.9028476,0.0004854296,0.000658856,0.00023580229],"about_ca_topic_score_codex":0.0007726566,"about_ca_topic_score_gemma":0.00013748328,"teacher_disagreement_score":0.116905354,"about_ca_system_score_codex":0.00009583744,"about_ca_system_score_gemma":0.000036494355,"threshold_uncertainty_score":0.806804},"labels":[],"label_agreement":null},{"id":"W2765458529","doi":"10.1007/978-1-4939-7374-3_1","title":"An Overview of Recent Therapeutics Advances for Duchenne Muscular Dystrophy","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Duchenne muscular dystrophy; Medicine; Dystrophin; Muscular dystrophy; Proinflammatory cytokine; Bioinformatics; Exon skipping; Sarcolemma; Dysferlin; Internal medicine; Inflammation; Exon; Biology; Genetics; Alternative splicing; Myocyte; Gene","score_opus":0.21265747912419525,"score_gpt":0.5546306718479649,"score_spread":0.34197319272376964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765458529","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000026438576,0.83593243,0.16254888,0.00001502681,0.0003724582,0.0008684278,0.0001049502,0.000007892534,0.00012345881],"genre_scores_gemma":[0.0000046325017,0.7965817,0.20194866,0.00012685519,0.0001033269,0.0003313937,0.0008255363,0.0000649852,0.000012922796],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99546957,0.0021994344,0.000804396,0.0009739259,0.00006346525,0.0004891874],"domain_scores_gemma":[0.99726564,0.00012305837,0.00076529547,0.0016180768,0.00014966489,0.00007829715],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012841289,0.0005547013,0.0018943283,0.0001726004,0.00008297519,0.000012183676,0.0010573975,0.0011757526,0.000020385563],"category_scores_gemma":[0.00043998726,0.00047200834,0.000756731,0.00013198728,0.00041461442,0.0000053364006,0.00019096507,0.0002878592,0.0000012657212],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077510354,0.00013916605,0.000005417459,0.0031744086,0.00030383133,0.0000022237189,0.000006680205,0.000009217497,0.04846532,0.0013071622,0.0000058684586,0.9465032],"study_design_scores_gemma":[0.0004780782,0.0009055149,0.000002706972,0.0004173796,0.00036262482,0.0000071211925,0.0000074791706,0.000007151303,0.0052994797,0.004561503,0.9874785,0.00047245494],"about_ca_topic_score_codex":0.000008610197,"about_ca_topic_score_gemma":0.00001149116,"teacher_disagreement_score":0.98747265,"about_ca_system_score_codex":0.000021558288,"about_ca_system_score_gemma":0.00026409802,"threshold_uncertainty_score":0.99977314},"labels":[],"label_agreement":null},{"id":"W2765488745","doi":"10.1007/978-1-4939-7306-4_40","title":"Reporter-Based Synthetic Genetic Array Analysis: A Functional Genomics Approach for Investigating Transcript or Protein Abundance Using Fluorescent Proteins in Saccharomyces cerevisiae","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Saccharomyces cerevisiae; Yeast; Biology; Computational biology; Reporter gene; Genetic screen; Gene; Genetics; Phenotype; Gene expression","score_opus":0.08300140534324163,"score_gpt":0.397732667670677,"score_spread":0.31473126232743537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765488745","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39078808,0.0005959706,0.6073132,0.00007780852,0.00004463225,0.0011153576,0.000023551192,0.0000057725374,0.00003561253],"genre_scores_gemma":[0.34360334,0.000014798594,0.6554955,0.000066452754,0.00007193847,0.00058266066,0.00009044326,0.000036049336,0.000038768434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964497,0.00094422133,0.0007085329,0.0010872551,0.00016281322,0.0006474662],"domain_scores_gemma":[0.99828434,0.000039838833,0.0003577531,0.0010522153,0.00013140905,0.00013446444],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017965584,0.0003388596,0.0005641522,0.00032948892,0.00022771204,0.00009122863,0.0006267889,0.0003772223,0.000013321198],"category_scores_gemma":[0.0010982248,0.00030043445,0.0002893631,0.00030306054,0.00039611806,0.000005963465,0.00013114879,0.0002532013,3.84047e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029369484,0.00014977164,0.008140124,0.0001647215,0.00017909324,0.000013895886,0.000035944708,0.009211315,0.9783949,0.000039003742,0.0000014507542,0.003376068],"study_design_scores_gemma":[0.0010865229,0.00039412064,0.0024406586,0.00005378679,0.00009994743,0.000016751319,0.000042446565,0.035502106,0.95899713,0.00053302234,0.00043538716,0.0003981236],"about_ca_topic_score_codex":0.00013332748,"about_ca_topic_score_gemma":0.00015337419,"teacher_disagreement_score":0.048182327,"about_ca_system_score_codex":0.000082845996,"about_ca_system_score_gemma":0.00043168952,"threshold_uncertainty_score":0.9999448},"labels":[],"label_agreement":null},{"id":"W2765526825","doi":"10.1007/978-1-4939-7374-3_19","title":"From gRNA Identification to the Restoration of Dystrophin Expression: A Dystrophin Gene Correction Strategy for Duchenne Muscular Dystrophy Mutations Using the CRISPR-Induced Deletion Method","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Dystrophin; CRISPR; Duchenne muscular dystrophy; Exon; Biology; Utrophin; Genetics; Gene; Computational biology","score_opus":0.04328729529551085,"score_gpt":0.4691693143321801,"score_spread":0.4258820190366693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765526825","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37456274,0.00021617037,0.6238072,0.00023750607,0.00062870677,0.00050742645,0.000029401393,0.0000060765483,0.000004774866],"genre_scores_gemma":[0.56778944,0.000013150991,0.43160662,0.00003055811,0.0002471514,0.00015608057,0.00012036055,0.000022768265,0.000013873497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768454,0.0008957089,0.0005144915,0.00053551164,0.00011121506,0.00025853256],"domain_scores_gemma":[0.9981375,0.00010857416,0.00036830577,0.0011016921,0.00023064161,0.00005329516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015215689,0.00021467874,0.00025695813,0.00010325306,0.0003572314,0.00007170236,0.0005394986,0.00025877924,0.000003677641],"category_scores_gemma":[0.0011589443,0.00016145797,0.00015727883,0.00013304182,0.0000910008,0.000011311738,0.00014317119,0.00017082473,6.7660136e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000856582,0.000025288979,0.000050819053,0.000008315812,0.00004730818,0.000001226363,0.0001400838,0.0449984,0.9446123,0.00010743867,0.000025457017,0.009897676],"study_design_scores_gemma":[0.00042032902,0.00022155893,0.0017028515,0.000018871782,0.00007278027,0.000010803074,0.00023630152,0.022697292,0.97271776,0.0011705891,0.00055745273,0.00017338834],"about_ca_topic_score_codex":0.00052041735,"about_ca_topic_score_gemma":0.00007940552,"teacher_disagreement_score":0.19322671,"about_ca_system_score_codex":0.00004223056,"about_ca_system_score_gemma":0.000071942944,"threshold_uncertainty_score":0.65840644},"labels":[],"label_agreement":null},{"id":"W2765788534","doi":"10.1007/7651_2017_84","title":"Simultaneous Detection of Autophagy and Epithelial to Mesenchymal Transition in the Non-small Cell Lung Cancer Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital Research Institute of Manitoba; University of Manitoba","funders":"","keywords":"Autophagy; Epithelial–mesenchymal transition; Cell biology; Mesenchymal stem cell; Carcinogenesis; Phenotype; Cell; Biology; Cancer cell; Cell growth; Apoptosis; Cancer research; Cancer; Metastasis; Gene; Biochemistry; Genetics","score_opus":0.012712958115106539,"score_gpt":0.3776871685013671,"score_spread":0.36497421038626054,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2765788534","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69126385,0.00052336,0.30739707,0.00017892625,0.00012388985,0.00038612145,0.0000088736615,0.000004460537,0.000113404465],"genre_scores_gemma":[0.93675303,0.00014005558,0.062342923,0.00062037277,0.000049370265,0.000060185226,0.000002242136,0.000011470891,0.00002036296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880904,0.0004932596,0.00021327581,0.000239911,0.000056640074,0.00018789707],"domain_scores_gemma":[0.9993236,0.00017898735,0.00008488178,0.00033460482,0.000031246567,0.000046698497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000697928,0.00011681784,0.00027673747,0.00011526238,0.000052962427,0.0000078541125,0.00014711039,0.00015576449,0.000013883853],"category_scores_gemma":[0.00011786883,0.00008679354,0.0000605933,0.00008091264,0.0001005769,0.00001398294,0.00002750659,0.00017315279,6.904899e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021463292,0.000070801376,0.00040319245,0.000052599167,0.000018674169,0.000121192475,0.0011406516,0.0002461375,0.9642036,0.000031316642,5.1346274e-7,0.0334967],"study_design_scores_gemma":[0.0011891753,0.00030880608,0.0069569997,0.000037373968,0.000054638014,0.000011020513,0.00007241697,0.006386111,0.9842933,0.000500361,0.000103136066,0.00008665395],"about_ca_topic_score_codex":0.0005081722,"about_ca_topic_score_gemma":0.00007889522,"teacher_disagreement_score":0.24548914,"about_ca_system_score_codex":0.000027396445,"about_ca_system_score_gemma":0.000043569053,"threshold_uncertainty_score":0.35393378},"labels":[],"label_agreement":null},{"id":"W2766052099","doi":"10.1007/978-1-4939-7306-4_2","title":"The Chromosome Transmission Fidelity Assay for Measuring Chromosome Loss in Yeast","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"Chromosome; Biology; Genetics; Chromosome segregation; Saccharomyces cerevisiae; Yeast; Gene","score_opus":0.04623750596968678,"score_gpt":0.4098484142965735,"score_spread":0.3636109083268867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766052099","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27006248,0.004731583,0.72091085,0.0013303225,0.00046575142,0.0009240845,0.00004410331,0.000011847977,0.0015190069],"genre_scores_gemma":[0.7824605,0.0008676244,0.2154304,0.00014896726,0.0002264237,0.00031431115,0.00006148895,0.000054102202,0.00043616162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972137,0.0010503,0.0003815045,0.0006061482,0.00012198549,0.00062631303],"domain_scores_gemma":[0.99860626,0.00012423017,0.00012230316,0.00094090815,0.00010431554,0.000101953854],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037570966,0.00021644014,0.0002800961,0.00007535576,0.00032343328,0.00006488982,0.0009538696,0.00035441646,0.000010111861],"category_scores_gemma":[0.0015583924,0.00016545146,0.00016198185,0.00008189872,0.00037335645,0.0000043240248,0.00033190163,0.0002778846,0.0000031805987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015227433,0.00004713082,0.0027031857,0.000026979602,0.00002466474,0.00001166349,0.000019716683,0.00005828258,0.9287038,0.00030193702,0.000020637095,0.067929745],"study_design_scores_gemma":[0.0010133096,0.00023726685,0.0038107457,0.000030135328,0.000006264703,0.000012319544,0.00001199469,0.0007663874,0.9551224,0.004902969,0.033850066,0.00023613304],"about_ca_topic_score_codex":0.0000660663,"about_ca_topic_score_gemma":0.00010205525,"teacher_disagreement_score":0.51239806,"about_ca_system_score_codex":0.00003774446,"about_ca_system_score_gemma":0.00012125521,"threshold_uncertainty_score":0.6746915},"labels":[],"label_agreement":null},{"id":"W2766052935","doi":"10.1007/978-1-4939-7306-4_1","title":"The A-Like Faker Assay for Measuring Yeast Chromosome III Stability","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia; Terry Fox Research Institute; BC Cancer Agency","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Saccharomyces cerevisiae; Biology; Yeast; Locus (genetics); Genetics; Chromosome; Gene","score_opus":0.06469039203813437,"score_gpt":0.4163954411856692,"score_spread":0.3517050491475348,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766052935","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33874485,0.0032956179,0.6530274,0.00069520506,0.0008784952,0.00086733006,0.000043787164,0.000013900259,0.0024333883],"genre_scores_gemma":[0.78160393,0.00015496973,0.21663216,0.00016521968,0.00026096843,0.00035598958,0.000044280798,0.00005020608,0.00073226605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997432,0.00096901896,0.0002974392,0.0005970028,0.00011747477,0.0005870489],"domain_scores_gemma":[0.9981526,0.00013755055,0.00012630374,0.0013183705,0.00016711216,0.00009805133],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039783735,0.0002021806,0.00024319162,0.000039910046,0.00050410454,0.000088931796,0.0009554489,0.00029039185,0.0000121000085],"category_scores_gemma":[0.0021252513,0.00015111417,0.0001760155,0.000051679843,0.0004966467,0.0000030297772,0.00059634645,0.00021803108,0.0000041590006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014720902,0.000043926484,0.001721422,0.000013411552,0.000046128152,0.0000034267746,0.000016198934,0.000013517111,0.9819092,0.000809873,0.000056579604,0.015219104],"study_design_scores_gemma":[0.00074243755,0.0002509488,0.0011836952,0.000006892018,0.000008152624,0.000007741672,0.000029768793,0.00034406886,0.9466923,0.0024147506,0.048114486,0.00020476253],"about_ca_topic_score_codex":0.000040677387,"about_ca_topic_score_gemma":0.00009994791,"teacher_disagreement_score":0.44285908,"about_ca_system_score_codex":0.000028538225,"about_ca_system_score_gemma":0.00011168184,"threshold_uncertainty_score":0.6162257},"labels":[],"label_agreement":null},{"id":"W2766333716","doi":"10.1007/978-1-4939-7362-0_19","title":"Site-Directed Unnatural Amino Acid Mutagenesis to Investigate Potassium Channel Pharmacology in Xenopus laevis Oocytes","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Xenopus; Mutagenesis; Amino acid; Ion channel; Potassium channel; Heterologous; Biology; Gating; Chemistry; Computational biology; Pharmacology; Biochemistry; Cell biology; Biophysics; Receptor; Mutation; Gene","score_opus":0.02843379007258488,"score_gpt":0.37724597973125323,"score_spread":0.34881218965866834,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766333716","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.874573,0.0009983097,0.118626036,0.0019900831,0.002664718,0.00057615514,0.000030666175,0.00005509504,0.00048593304],"genre_scores_gemma":[0.86063117,0.00012817435,0.13481057,0.002858907,0.00046057682,0.0001891067,0.00027002214,0.000058027534,0.00059345533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99697757,0.001145262,0.0004285316,0.0007922927,0.000085311134,0.00057101436],"domain_scores_gemma":[0.99883145,0.00004124413,0.00020261412,0.00061667134,0.00013848142,0.0001695305],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010021946,0.00032085227,0.00041310556,0.0003530364,0.00015752221,0.000040512456,0.00048199703,0.0005518784,0.00004346489],"category_scores_gemma":[0.0011324482,0.00031952403,0.00011007976,0.0002825592,0.00024204318,0.000009522406,0.00038233833,0.00025429367,0.000019731671],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021149353,0.000054622276,0.0034839693,0.000014000951,0.0000379284,0.000032828306,0.00008440511,0.00049904134,0.98974407,0.000083570005,0.0003346927,0.005419397],"study_design_scores_gemma":[0.0011591531,0.00026936873,0.007454093,0.000013640868,0.000019366342,0.000019133271,0.000026233809,0.0020822007,0.97801185,0.0004855028,0.010087394,0.00037206494],"about_ca_topic_score_codex":0.00015570017,"about_ca_topic_score_gemma":0.000120412304,"teacher_disagreement_score":0.016184522,"about_ca_system_score_codex":0.000060653056,"about_ca_system_score_gemma":0.00007780398,"threshold_uncertainty_score":0.9999257},"labels":[],"label_agreement":null},{"id":"W2766427617","doi":"10.1007/978-1-4939-6786-5_31","title":"Erratum to: Isolation and Characterization of Aortic Dendritic Cells and Lymphocytes in Atherosclerosis","year":2017,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Isolation (microbiology); Characterization (materials science); Biology; Materials science; Nanotechnology; Microbiology","score_opus":0.01629152695981736,"score_gpt":0.3104582883076169,"score_spread":0.29416676134779957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766427617","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8045605,0.041102763,0.13775577,0.00015880966,0.013339892,0.0016882601,0.0004177353,0.000054917848,0.00092137884],"genre_scores_gemma":[0.7900653,0.057388477,0.123839475,0.0016183072,0.00048314562,0.0011524257,0.004586703,0.00059476733,0.020271389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665654,0.001704025,0.00054300745,0.0006822837,0.000036429872,0.00037773338],"domain_scores_gemma":[0.998917,0.00011271154,0.00031175863,0.00056082633,0.000058832862,0.00003888005],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008937446,0.00035014603,0.0010133946,0.00034768827,0.00007670772,0.000026955347,0.00026112978,0.0011222766,0.000023668234],"category_scores_gemma":[0.0003064774,0.00034670092,0.00015731028,0.00013591482,0.0003708243,0.00004639097,0.00025507927,0.0004017565,0.00000507259],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033521817,0.00005550441,0.004037826,0.00011146281,0.00012722427,0.0000019738447,0.00017390592,8.687474e-7,0.9759194,0.00006642909,0.00022363973,0.019248217],"study_design_scores_gemma":[0.004237041,0.00076704164,0.4027163,0.0019180238,0.0006384784,0.000033111442,0.00016386663,0.00013537463,0.5548568,0.0019615372,0.03095282,0.001619606],"about_ca_topic_score_codex":0.00015673437,"about_ca_topic_score_gemma":0.00003225628,"teacher_disagreement_score":0.42106265,"about_ca_system_score_codex":0.000059026675,"about_ca_system_score_gemma":0.0000972038,"threshold_uncertainty_score":0.9998985},"labels":[],"label_agreement":null},{"id":"W2766508100","doi":"10.1007/978-1-4939-7346-0_7","title":"High Throughput Flow Cytometry for Cell Surface Profiling","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"Hospital for Sick Children; Ontario Ministry of Health and Long-Term Care","keywords":"Flow cytometry; Computational biology; Cytometry; Population; Biology; Profiling (computer programming); Cluster of differentiation; Cell; Mass cytometry; Computer science; Phenotype; Molecular biology; Genetics; Gene","score_opus":0.03331974749134026,"score_gpt":0.3834905238673473,"score_spread":0.350170776376007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766508100","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.273123,0.00069689413,0.7244394,0.0001184793,0.0007139677,0.0003431984,0.00003879253,0.00001298743,0.0005133284],"genre_scores_gemma":[0.22249316,0.00009333806,0.7765702,0.00027062546,0.00015565926,0.000037803766,0.00012989886,0.00004326388,0.00020604944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805576,0.00037226256,0.00033605302,0.0006893406,0.000060323466,0.0004862463],"domain_scores_gemma":[0.99866104,0.00007143064,0.00017294659,0.0009316702,0.00009014439,0.000072743605],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011022433,0.00026354546,0.00037508772,0.000060474365,0.00020879389,0.000050996776,0.0006567986,0.0004887572,0.000008522816],"category_scores_gemma":[0.0005550829,0.00025670952,0.00019598426,0.00006442801,0.00021506092,0.0000047424774,0.0001955689,0.00018903265,0.000003076488],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001314972,0.00008781676,0.0065520257,0.00004198261,0.000036155732,0.0000056983417,0.000015706257,0.00030321814,0.986921,0.0005698198,0.000037298625,0.0052977516],"study_design_scores_gemma":[0.0013558794,0.00038156105,0.00029842506,0.000009328123,0.000022193708,0.0000045999955,0.000014978298,0.0010561987,0.98900133,0.0027520708,0.004784966,0.00031846104],"about_ca_topic_score_codex":0.000079769365,"about_ca_topic_score_gemma":0.000020304626,"teacher_disagreement_score":0.05213085,"about_ca_system_score_codex":0.000021220769,"about_ca_system_score_gemma":0.000072348215,"threshold_uncertainty_score":0.9999885},"labels":[],"label_agreement":null},{"id":"W2766531478","doi":"10.1007/978-1-4939-7374-3_9","title":"Exon Skipping Therapy Using Phosphorodiamidate Morpholino Oligomers in the mdx52 Mouse Model of Duchenne Muscular Dystrophy","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Japan Society for the Promotion of Science; U.S. Food and Drug Administration; Nippon Shinyaku; Japan Agency for Medical Research and Development","keywords":"Exon skipping; Morpholino; Duchenne muscular dystrophy; Dystrophin; Exon; mdx mouse; RNA splicing; Muscular dystrophy; Nonsense mutation; Molecular biology; Biology; Alternative splicing; Genetics; Medicine; Mutation; Gene; RNA; Gene knockdown; Missense mutation","score_opus":0.04901873409374752,"score_gpt":0.39450323733343196,"score_spread":0.34548450323968444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766531478","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78559995,0.0011860857,0.21252508,0.00009334783,0.0001004939,0.00027519892,0.000013888964,0.0000046599434,0.00020131034],"genre_scores_gemma":[0.8442603,0.00077859557,0.15427929,0.00051397074,0.000036241232,0.00004846786,0.00004111873,0.000029607681,0.000012411989],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972896,0.0011177139,0.00043382324,0.0005975305,0.000084533895,0.00047680322],"domain_scores_gemma":[0.9982385,0.00004531839,0.00029215074,0.0013170023,0.000061727485,0.000045306344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014900399,0.00028565788,0.00043190218,0.00013223504,0.00014723281,0.000020325344,0.0009629669,0.0004164256,0.000006993401],"category_scores_gemma":[0.0003997419,0.00023258984,0.00020804991,0.00010666422,0.0005455249,0.000009088835,0.00024870055,0.0002884866,8.159569e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022606034,0.00014094371,0.0020545246,0.0000146677885,0.000058065143,0.0000063502234,0.00014796671,0.008248691,0.98450226,0.0006744633,0.0000038453272,0.003922169],"study_design_scores_gemma":[0.0019246037,0.00026832137,0.0016999652,0.000015897824,0.000019206054,0.0000060732214,0.00015887988,0.008228752,0.98208946,0.004933919,0.00029950443,0.0003554413],"about_ca_topic_score_codex":0.00043978333,"about_ca_topic_score_gemma":0.00003550031,"teacher_disagreement_score":0.05866037,"about_ca_system_score_codex":0.00001757932,"about_ca_system_score_gemma":0.000082620085,"threshold_uncertainty_score":0.9484738},"labels":[],"label_agreement":null},{"id":"W2766652040","doi":"10.1007/978-1-4939-7428-3_6","title":"Approaches for Analysis of Erythroid Cell Parameters and Hemoglobinopathies in Mouse Models","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hemoglobinopathies and Related Disorders","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Université de Montréal","funders":"Canadian Institutes of Health Research; Canadian Blood Services","keywords":"Thalassemia; Hemoglobin; Computational biology; Disease; Human disease; Cell; Hemoglobinopathy; Hemoglobin s; Red blood cell; Biology; Beta thalassemia; Gene; Immunology; Sickle cell anemia; Medicine; Genetics; Hemolytic anemia; Pathology; Biochemistry","score_opus":0.065363484701699,"score_gpt":0.3726998513757761,"score_spread":0.3073363666740771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766652040","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63163775,0.0016830256,0.3653222,0.00023575968,0.000035878555,0.00038062132,0.000014426244,0.0000073980814,0.00068293203],"genre_scores_gemma":[0.5022912,0.00032746675,0.49716863,0.000098218625,0.0000025935042,0.000042117626,0.0000178512,0.000012597964,0.000039326365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985835,0.00031287948,0.00038703054,0.00038449693,0.000052470426,0.00027960696],"domain_scores_gemma":[0.9990304,0.0001644811,0.00018309575,0.0005291165,0.00003333791,0.00005956984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001121952,0.00016179086,0.0007679643,0.0005188483,0.000050131828,0.000010726953,0.00015447332,0.00032482093,0.0000018366361],"category_scores_gemma":[0.00042610106,0.00013581911,0.00018403563,0.00023568085,0.00038613874,0.000033681205,0.00009752633,0.00019185209,1.2621935e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079071865,0.0007544542,0.10605271,0.0006208142,0.0013347901,0.000069803384,0.0020644,0.016154302,0.7780833,0.009418064,0.0000115487055,0.08464509],"study_design_scores_gemma":[0.008714944,0.0012442692,0.01126928,0.00011778626,0.0022005253,0.000022904218,0.0022097167,0.36811396,0.56514144,0.04001071,0.00019166905,0.00076278526],"about_ca_topic_score_codex":0.0002504952,"about_ca_topic_score_gemma":0.000039287985,"teacher_disagreement_score":0.35195968,"about_ca_system_score_codex":0.000025186184,"about_ca_system_score_gemma":0.000035406774,"threshold_uncertainty_score":0.5538543},"labels":[],"label_agreement":null},{"id":"W2766661568","doi":"10.1007/978-1-4939-7435-1_2","title":"MicroRNAs in Breast Cancer: Diagnostic and Therapeutic Potential","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"microRNA; Breast cancer; Medicine; Cancer; Cancer research; Oncology; Internal medicine; Biology; Genetics; Gene","score_opus":0.012659238496102754,"score_gpt":0.36609781516216716,"score_spread":0.35343857666606443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766661568","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89590573,0.0090972325,0.093618564,0.00072569225,0.00025960006,0.00026791802,0.000031959866,0.000006348608,0.00008694362],"genre_scores_gemma":[0.95926476,0.0007567866,0.039492708,0.00026540723,0.000067975765,0.00006985154,0.000029419702,0.000026068112,0.000027027874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998466,0.0005207215,0.00022286258,0.0004636547,0.000034681645,0.00029203904],"domain_scores_gemma":[0.99922067,0.000038147507,0.00012567277,0.0005337835,0.000033672917,0.000048046208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049820315,0.00017114112,0.00020928793,0.00009020266,0.000075338816,0.000032346932,0.0002983968,0.0002547821,0.0000216085],"category_scores_gemma":[0.00026071977,0.00017076208,0.000058708407,0.0000455392,0.00025553195,0.0000030415229,0.00024300115,0.00011997062,0.0000015286889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004737483,0.000036127294,0.07010908,0.000013388555,0.000028432492,0.000017707176,0.000010491651,0.000056354555,0.8957486,0.00015302387,0.000010627642,0.033768807],"study_design_scores_gemma":[0.0012985903,0.000060835016,0.48202866,0.000041315932,0.000030424751,0.00007635749,0.000011837357,0.0002063235,0.51140296,0.0030490782,0.0014796822,0.00031394014],"about_ca_topic_score_codex":0.0002242469,"about_ca_topic_score_gemma":0.00007527282,"teacher_disagreement_score":0.41191956,"about_ca_system_score_codex":0.000026196964,"about_ca_system_score_gemma":0.000057423964,"threshold_uncertainty_score":0.69634753},"labels":[],"label_agreement":null},{"id":"W2766671537","doi":"10.1007/978-1-4939-7306-4_15","title":"DNA Replication Profiling Using Deep Sequencing","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"DNA replication; Biology; Eukaryotic DNA replication; Control of chromosome duplication; Pre-replication complex; Origin recognition complex; Replication factor C; Genetics; Replication (statistics); DNA sequencing; Computational biology; DNA; Virology","score_opus":0.05344731471579044,"score_gpt":0.4258110132448587,"score_spread":0.37236369852906825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766671537","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38660407,0.00024495053,0.61190337,0.00003689736,0.00019039818,0.00019288794,0.0000019730007,0.000014802478,0.0008106376],"genre_scores_gemma":[0.20473574,0.000020733467,0.79480433,0.00019422865,0.00008594143,0.000040171242,0.000035017554,0.0000327547,0.000051065585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978376,0.0006300033,0.00031101974,0.00078824733,0.00006261353,0.00037050265],"domain_scores_gemma":[0.9976927,0.0000209245,0.00025634235,0.0018950793,0.000073315714,0.0000616284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018471315,0.0001917798,0.00023484828,0.00008649505,0.0001796672,0.000039044382,0.0005762085,0.00035632993,0.0000071913632],"category_scores_gemma":[0.0018381983,0.00019989819,0.00010713733,0.000059773833,0.00014746453,0.0000056362837,0.0003973479,0.00015361854,0.000002991276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019015215,0.0000127434205,0.0018042673,0.0000100812995,0.000023411121,0.000014278094,0.000016949498,0.000105935345,0.9832772,0.0024457155,0.0000010651482,0.012269325],"study_design_scores_gemma":[0.00028917284,0.00009754308,0.00013411656,0.000012057402,0.000014191545,0.00005299802,0.000032685526,0.0043526287,0.9872889,0.0068597985,0.00064138154,0.00022450706],"about_ca_topic_score_codex":0.000052258743,"about_ca_topic_score_gemma":0.000016025278,"teacher_disagreement_score":0.18290097,"about_ca_system_score_codex":0.00006700975,"about_ca_system_score_gemma":0.00009079172,"threshold_uncertainty_score":0.81516117},"labels":[],"label_agreement":null},{"id":"W2766753304","doi":"10.1007/978-1-4939-7306-4_34","title":"A Chromatin Fiber Analysis Pipeline to Model DNA Synthesis and Structures in Fission Yeast","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum; Toronto Metropolitan University","funders":"","keywords":"Chromatin; Schizosaccharomyces pombe; DNA replication; DNA; Fission; Pipeline (software); Replication (statistics); Origin of replication; Computational biology; Solenoid; Fiber; Yeast; Computer science; Biology; Cell biology; Chemistry; Physics; Genetics; Saccharomyces cerevisiae; Programming language","score_opus":0.027736670348015257,"score_gpt":0.41367362930998186,"score_spread":0.3859369589619666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766753304","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.714881,0.00039267138,0.28331187,0.0004070954,0.000030898147,0.00018227128,0.000033546617,0.0000040107766,0.00075664074],"genre_scores_gemma":[0.59792316,0.00006654089,0.4013864,0.00017052288,0.00003105814,0.00005086954,0.000023912473,0.000017039336,0.00033048535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982118,0.00051214785,0.0002627717,0.00057870825,0.0000857881,0.00034879055],"domain_scores_gemma":[0.99900955,0.00003852682,0.00007439131,0.0007098246,0.00004700591,0.00012069302],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008439472,0.0001836796,0.00033923646,0.0003009833,0.00008191083,0.000039390223,0.00042071662,0.00026888427,0.000040935258],"category_scores_gemma":[0.0012769694,0.00016067456,0.000093608134,0.00018406686,0.00013755869,0.0000024969966,0.00056632125,0.00014332127,0.0000032705495],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007467526,0.000026172702,0.0034752558,0.000011805556,0.000054140866,0.000009056267,0.00003635377,0.0024087667,0.96664256,0.00007419659,0.000036175657,0.027150834],"study_design_scores_gemma":[0.0003230833,0.00009706663,0.010568148,0.000012546479,0.00004171859,0.000004684216,0.00001587625,0.015892697,0.9697599,0.0018651128,0.0011742072,0.00024499494],"about_ca_topic_score_codex":0.0001090604,"about_ca_topic_score_gemma":0.00023931157,"teacher_disagreement_score":0.11807454,"about_ca_system_score_codex":0.00001539993,"about_ca_system_score_gemma":0.00004333888,"threshold_uncertainty_score":0.6552118},"labels":[],"label_agreement":null},{"id":"W2766976958","doi":"10.1007/978-1-4939-7306-4_4","title":"Molecular Genetic Characterization of Mutagenesis Using a Highly Sensitive Single-Stranded DNA Reporter System in Budding Yeast","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Budding yeast; Yeast; Mutagenesis; DNA; Biology; Genetics; Saccharomyces cerevisiae; Mutation; Cell biology; Gene","score_opus":0.025705392761461325,"score_gpt":0.3365597769992808,"score_spread":0.31085438423781947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2766976958","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60254526,0.000049016933,0.3967377,0.000011517171,0.00016468595,0.00027343305,0.000014940785,0.00001072641,0.00019273841],"genre_scores_gemma":[0.73994833,0.0000076259257,0.25982046,0.000040018796,0.000038042166,0.000025679341,0.000055063203,0.000044981763,0.000019776087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99684626,0.0011318565,0.0007228532,0.0007579323,0.00011877277,0.000422332],"domain_scores_gemma":[0.9981356,0.000018582616,0.0006252872,0.0010254792,0.0001246947,0.00007031921],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001099183,0.00029978057,0.000546653,0.0002462598,0.00006944852,0.000031264048,0.00035964485,0.00046745696,0.0000037610366],"category_scores_gemma":[0.00041842152,0.00032607344,0.00017292277,0.00013686794,0.00017950824,0.000008283156,0.00027544424,0.00011621203,0.0000011188728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008876922,0.000062914965,0.0013372442,0.000064608466,0.000067093904,0.00032042057,0.000045804863,0.00019038656,0.99269646,0.00014961518,1.2299085e-7,0.004976556],"study_design_scores_gemma":[0.00071442587,0.00018888773,0.0027580655,0.000107331594,0.00004600299,0.0001526663,0.00005382518,0.0019842815,0.99350935,0.000099308905,0.00007869649,0.00030716657],"about_ca_topic_score_codex":0.00008480503,"about_ca_topic_score_gemma":0.000016325655,"teacher_disagreement_score":0.13740309,"about_ca_system_score_codex":0.00007926327,"about_ca_system_score_gemma":0.000081484795,"threshold_uncertainty_score":0.9999191},"labels":[],"label_agreement":null},{"id":"W2767062173","doi":"10.1007/978-1-4939-7435-1_1","title":"Noncoding RNAs in DNA Damage Response: Opportunities for Cancer Therapeutics","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"DNA damage; Long non-coding RNA; Cancer research; DNA; Computational biology; Cancer; Biology; RNA; Genetics; Gene","score_opus":0.1214780412267881,"score_gpt":0.45785825806430613,"score_spread":0.33638021683751806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767062173","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5345824,0.0009030472,0.46151495,0.0012789263,0.00050538394,0.0004449157,0.000038776125,0.000014671294,0.0007169533],"genre_scores_gemma":[0.23310597,0.00058629306,0.7622137,0.0019126924,0.00015421555,0.00053956726,0.000059859263,0.000091479196,0.0013361939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997499,0.001143216,0.00032828914,0.00052049826,0.000058155172,0.00045082488],"domain_scores_gemma":[0.99866104,0.0001240014,0.00019119814,0.0008992749,0.00006760393,0.000056864385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027646834,0.00022640551,0.00032144197,0.00014705796,0.00011935248,0.00003809741,0.0006396209,0.00040091187,0.000011766269],"category_scores_gemma":[0.0008258481,0.00022804784,0.0001256279,0.000048525413,0.00021582493,0.0000054661436,0.00030392932,0.00015802005,6.3637447e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043784417,0.00003438499,0.0012143631,0.000014943642,0.000043021162,0.00003119661,0.0000553849,0.000019047711,0.96230733,0.0016295118,0.000018365581,0.034194607],"study_design_scores_gemma":[0.000935784,0.00030949948,0.0010468134,0.000025982969,0.000016857393,0.000006244952,0.00013597606,0.00035513396,0.9326559,0.0040106927,0.06022443,0.00027673144],"about_ca_topic_score_codex":0.000057191737,"about_ca_topic_score_gemma":0.00017944296,"teacher_disagreement_score":0.30147642,"about_ca_system_score_codex":0.000047780697,"about_ca_system_score_gemma":0.00016473547,"threshold_uncertainty_score":0.9299521},"labels":[],"label_agreement":null},{"id":"W2767082398","doi":"10.1007/978-1-4939-7374-3_10","title":"Designing Effective Antisense Oligonucleotides for Exon Skipping","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Exon skipping; Exon; Duchenne muscular dystrophy; Muscular dystrophy; Spinal muscular atrophy; Dystrophin; RNA splicing; Antisense therapy; Genetics; mdx mouse; Biology; Limb-girdle muscular dystrophy; Dysferlin; Alternative splicing; Medicine; Mutation; Oligonucleotide; RNA; Gene","score_opus":0.031084284428795572,"score_gpt":0.4372942944043369,"score_spread":0.40621000997554135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767082398","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3546849,0.00043631854,0.64373636,0.00009181769,0.00012894023,0.00045264102,0.00000480236,0.000007955356,0.0004562636],"genre_scores_gemma":[0.29314047,0.00007087895,0.70609456,0.00017679007,0.00011118019,0.00017203607,0.000022546305,0.000033673077,0.00017789025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786985,0.000750593,0.00022748712,0.00055658823,0.00005407076,0.00054143305],"domain_scores_gemma":[0.99883014,0.00016640141,0.0001375489,0.000691645,0.000085454616,0.000088801404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019833995,0.00019249701,0.00029399197,0.000109158056,0.00028692867,0.000061705294,0.00045493786,0.00025278478,0.0000035650821],"category_scores_gemma":[0.003463481,0.00018521574,0.00015269514,0.00004736414,0.00022900618,0.0000052860596,0.0002827564,0.0001575054,0.000002325107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121964855,0.000021013111,0.003870825,0.000023190589,0.00005155549,0.000018063607,0.00001575806,0.00003115645,0.93815655,0.00064432406,0.000026120115,0.05701946],"study_design_scores_gemma":[0.00088105537,0.00043622256,0.0023637342,0.000030321145,0.000010672332,0.0000148870095,0.000029442692,0.000518278,0.9906413,0.0024188978,0.0024316574,0.00022353198],"about_ca_topic_score_codex":0.00007156198,"about_ca_topic_score_gemma":0.000024207911,"teacher_disagreement_score":0.062358167,"about_ca_system_score_codex":0.000022045655,"about_ca_system_score_gemma":0.0000452263,"threshold_uncertainty_score":0.7552879},"labels":[],"label_agreement":null},{"id":"W2767358811","doi":"10.1007/978-1-4939-7395-8_6","title":"Bacteriophage Taxonomy: An Evolving Discipline","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institutes of Health","keywords":"Taxonomy (biology); Virus classification; Biology; Prokaryote; Genome; Bacteriophage; Evolutionary biology; Phylogenetics; Zoology; Genetics; Gene","score_opus":0.0367143790093185,"score_gpt":0.40423041741079346,"score_spread":0.36751603840147495,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767358811","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40379012,0.000033319695,0.5848733,0.00029991916,0.0005150425,0.00020710337,0.000008915291,0.000023940636,0.010248299],"genre_scores_gemma":[0.30007082,0.000006716757,0.6992328,0.00018821417,0.000036172674,0.000041752945,0.000010290618,0.000013592678,0.00039963404],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99876124,0.00035611307,0.00019726102,0.00037890716,0.00002664651,0.0002798599],"domain_scores_gemma":[0.9990549,0.00003394,0.00012577823,0.00070575875,0.0000058042096,0.00007381498],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005488876,0.00013173411,0.00018585518,0.00003709901,0.00022882313,0.00009026248,0.00052274566,0.00011161241,0.002489776],"category_scores_gemma":[0.0001946777,0.00012015042,0.00006197699,0.000044823104,0.00027094054,0.00026427966,0.00054625416,0.00018307945,0.00009443305],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000060787224,0.000041592695,0.0065666395,0.0000012400438,0.0000044947365,0.000017854418,0.000042542615,0.000009493815,0.94312304,0.00009518903,0.000016806722,0.050075],"study_design_scores_gemma":[0.00057581277,0.00020976472,0.60535884,0.000019624877,0.000020397769,0.00004566374,0.000054195963,0.0012123899,0.32668358,0.0030188884,0.062297173,0.0005036739],"about_ca_topic_score_codex":0.0007223532,"about_ca_topic_score_gemma":0.00043816466,"teacher_disagreement_score":0.61643946,"about_ca_system_score_codex":0.00008210316,"about_ca_system_score_gemma":0.0000066113525,"threshold_uncertainty_score":0.9984221},"labels":[],"label_agreement":null},{"id":"W2767408894","doi":"10.1007/978-1-4939-7447-4_3","title":"Construction of Synthetic Antibody Phage-Display Libraries","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Vetenskapsrådet","keywords":"Phage display; Computational biology; Antibody; Peptide library; Complementarity determining region; Recombinant DNA; Synthetic biology; Antigen; Computer science; Biology; Chemistry; Monoclonal antibody; Immunology; Genetics; Peptide sequence; Gene","score_opus":0.03923357535321549,"score_gpt":0.4695463356715542,"score_spread":0.4303127603183387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767408894","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63420194,0.0017462542,0.33838108,0.0033575664,0.00044376956,0.0003510671,0.000020341728,0.000022652694,0.021475293],"genre_scores_gemma":[0.172001,0.0002450899,0.8271409,0.00012090526,0.00005151336,0.000009975817,0.000022782366,0.000013698747,0.00039407084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987308,0.00043537444,0.00025918317,0.00024348922,0.00009134049,0.00023984068],"domain_scores_gemma":[0.99911433,0.00016496153,0.00012555011,0.0004754045,0.000053785927,0.000065939435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064031477,0.000114328126,0.0003978099,0.0001475836,0.00008941067,0.000014432937,0.00022397423,0.00014968515,0.00014129853],"category_scores_gemma":[0.000788964,0.000088279674,0.00010722929,0.00006892591,0.001000786,0.000037361016,0.00017728031,0.00022129752,0.000007370769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018789613,0.00005117039,0.07160072,0.00008281291,0.00005293176,0.00008534356,0.000033947574,4.8759904e-7,0.8085798,0.07915412,0.0000064390965,0.040164355],"study_design_scores_gemma":[0.00087112095,0.00040626203,0.04184217,0.00011481748,0.00004252277,0.00022546944,0.00004777265,0.0004618103,0.9035372,0.047992326,0.0043079015,0.00015063067],"about_ca_topic_score_codex":0.00013193015,"about_ca_topic_score_gemma":0.000002377995,"teacher_disagreement_score":0.48875988,"about_ca_system_score_codex":0.000010082443,"about_ca_system_score_gemma":0.00007156262,"threshold_uncertainty_score":0.36874375},"labels":[],"label_agreement":null},{"id":"W2767763917","doi":"10.1007/978-1-4939-7447-4_24","title":"Next-Generation DNA Sequencing of VH/VL Repertoires: A Primer and Guide to Applications in Single-Domain Antibody Discovery","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"Canadian Institutes of Health Research","keywords":"Amplicon; Multiplex; Computational biology; Phage display; DNA sequencing; Biology; Primer (cosmetics); Single-domain antibody; Panning (audio); Genomic library; Genetics; DNA; Antibody; Polymerase chain reaction; Gene; Base sequence","score_opus":0.09357199253085169,"score_gpt":0.47315637854157044,"score_spread":0.37958438601071876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767763917","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6670155,0.0005480361,0.32986555,0.0011164709,0.000034607634,0.0004028732,0.000006860619,0.000004597652,0.0010055141],"genre_scores_gemma":[0.26014906,0.00012935826,0.7387315,0.00036418514,0.00007692445,0.00007425386,0.00005713857,0.0000164538,0.00040109918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984568,0.00043756454,0.00038046364,0.0003730154,0.00009959809,0.00025257556],"domain_scores_gemma":[0.99910283,0.00016593027,0.00010290943,0.0004912616,0.000058943904,0.000078152785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011038965,0.00012806954,0.00038546085,0.00023197405,0.00008750749,0.000027668728,0.00017455951,0.00012573303,0.0000074921945],"category_scores_gemma":[0.00086077716,0.00010349688,0.00005726535,0.00013523252,0.0002467776,0.000062292915,0.00020359838,0.00016226461,0.0000011770998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006767536,0.00005770111,0.036390383,0.00004533367,0.000020993075,0.000030544274,0.0001516607,0.000005788921,0.9460316,0.003964641,0.000008262401,0.013225468],"study_design_scores_gemma":[0.00067143916,0.0003845826,0.02162631,0.0001226771,0.000018596946,0.000042115673,0.00015737113,0.00049868925,0.96542627,0.0032052062,0.0076667625,0.00017995415],"about_ca_topic_score_codex":0.0011224027,"about_ca_topic_score_gemma":0.00015972804,"teacher_disagreement_score":0.40886596,"about_ca_system_score_codex":0.000072997726,"about_ca_system_score_gemma":0.00010132806,"threshold_uncertainty_score":0.42204803},"labels":[],"label_agreement":null},{"id":"W2767768585","doi":"10.1007/978-1-4939-7309-5_4","title":"Liquid Chromatography/Mass Spectrometry (LC/MS) for the Detection and Quantification of N-Acyl-L-Homoserine Lactones (AHLs) and 4-Hydroxy-2-Alkylquinolines (HAQs)","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Chromatography; Mass spectrometry; Chemistry; Homoserine; High-performance liquid chromatography; Liquid chromatography–mass spectrometry; Quorum sensing; Biochemistry","score_opus":0.028461397472633515,"score_gpt":0.35759451247374435,"score_spread":0.32913311500111087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767768585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7363115,0.002004543,0.26092657,0.00019631351,0.000088018474,0.000117743046,0.000022118393,0.000021373251,0.0003118536],"genre_scores_gemma":[0.9346316,0.0007349112,0.06440702,0.0000149003245,0.000074376774,0.00007981218,0.000010109612,0.000021380214,0.000025912641],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988763,0.00011690035,0.0003327642,0.00039885126,0.000054746368,0.00022047063],"domain_scores_gemma":[0.9983883,0.0005392728,0.00030107077,0.0006727924,0.000056926638,0.00004163895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007851505,0.00019045055,0.00035789082,0.00008557738,0.0001929096,0.00004014944,0.00028783557,0.00026096287,0.000026528556],"category_scores_gemma":[0.0009740319,0.00015411148,0.00010882842,0.00009834594,0.0004754401,0.000045359313,0.00010347297,0.0001468084,1.8158495e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015401078,0.000025118083,0.0014715977,0.00019283844,0.00007657038,0.000001934973,0.00004257832,0.0000024887208,0.9874198,0.00047797023,4.8659416e-7,0.010134637],"study_design_scores_gemma":[0.00038012734,0.00006406002,0.0013646758,0.000028616887,0.000064178064,0.000017623352,0.00008482159,0.001300342,0.99372643,0.002083752,0.00072178955,0.00016357271],"about_ca_topic_score_codex":0.000109899156,"about_ca_topic_score_gemma":0.000027132997,"teacher_disagreement_score":0.1983201,"about_ca_system_score_codex":0.000013617319,"about_ca_system_score_gemma":0.000012743195,"threshold_uncertainty_score":0.62844837},"labels":[],"label_agreement":null},{"id":"W2767977574","doi":"10.1007/978-1-4939-7395-8_15","title":"Bacteriophage Production in Bioreactors","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":33,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Bioreactor; Multiplicity of infection; Bacteriophage; Virulence; Volume (thermodynamics); Biology; Biochemical engineering; Engineering; Virology; Physics; Virus; Genetics; Escherichia coli","score_opus":0.021607968139792676,"score_gpt":0.38910179705455067,"score_spread":0.367493828914758,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2767977574","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9696064,0.000021655416,0.02432778,0.0005159154,0.0007817855,0.00016743956,0.0000023589646,0.000012685193,0.00456401],"genre_scores_gemma":[0.7039289,0.000023798673,0.29549342,0.00012907802,0.000027949478,0.000025205456,0.000005339802,0.000011979962,0.00035435255],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989119,0.00031219565,0.00018668333,0.00033828098,0.000024798472,0.00022611959],"domain_scores_gemma":[0.9993855,0.00002157548,0.00009998087,0.00045889046,0.0000031312836,0.000030917457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005569436,0.00010342641,0.0001516164,0.00006537762,0.00007814242,0.000028932334,0.00028334523,0.000110150766,0.00061130605],"category_scores_gemma":[0.0003255831,0.00009633228,0.00004371773,0.00007892128,0.0002158417,0.00012578917,0.00023306877,0.00018557036,0.00007118497],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007951647,0.00003960911,0.022765545,0.0000014199823,0.0000022543104,0.000015614482,0.00006127426,0.000007308141,0.93050706,0.000036133766,0.000013065923,0.04654277],"study_design_scores_gemma":[0.00015570196,0.00003209999,0.49237603,0.0000095130845,0.0000029583528,0.000014871475,0.000012982657,0.000020238207,0.49684313,0.0008235617,0.009584345,0.00012458477],"about_ca_topic_score_codex":0.0014532619,"about_ca_topic_score_gemma":0.00067469623,"teacher_disagreement_score":0.46961048,"about_ca_system_score_codex":0.00010162994,"about_ca_system_score_gemma":0.0000048399465,"threshold_uncertainty_score":0.6693372},"labels":[],"label_agreement":null},{"id":"W2769306477","doi":"10.1007/978-1-4939-7343-9_7","title":"Encapsulation of Listeria Phage A511 by Alginate to Improve Its Thermal Stability","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microencapsulation and Drying Processes","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Listeria; Thermal stability; Encapsulation (networking); Microbiology; Materials science; Biology; Computer science; Listeria monocytogenes; Chemical engineering; Bacteria; Engineering; Computer security; Genetics","score_opus":0.043102381207095315,"score_gpt":0.38560830565422144,"score_spread":0.34250592444712613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769306477","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96588993,0.00020208722,0.03197104,0.00055010366,0.0001563152,0.0002359837,0.000050564104,0.000017424802,0.0009265758],"genre_scores_gemma":[0.9588553,0.000005540845,0.040800188,0.00019017696,0.000023083965,0.000017888222,0.00002567657,0.0000011348011,0.00008104495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868137,0.00045951773,0.00026643535,0.00032895355,0.000056653673,0.00020705632],"domain_scores_gemma":[0.99940526,0.00011082332,0.00019147176,0.00015362095,0.000084160805,0.000054671276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009592014,0.000115581024,0.00021830246,0.000015269894,0.00010707214,0.000033126867,0.0003864181,0.00012968815,0.00027070873],"category_scores_gemma":[0.0006204297,0.000053231815,0.00005435994,0.00009630576,0.00008410322,0.00006122611,0.0001552348,0.00007903311,0.0000052923947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023206403,0.000034084587,0.0030735428,0.000009388102,0.000003667818,6.5038927e-7,0.000052582287,0.0000020001858,0.92129517,0.00024810596,0.0000067566207,0.07525083],"study_design_scores_gemma":[0.0001315926,0.0001471941,0.03696352,0.0000067546266,0.0000036649255,4.6662203e-7,0.000020078807,0.00011227031,0.9591596,0.0011615084,0.0021808555,0.00011248038],"about_ca_topic_score_codex":0.00020776335,"about_ca_topic_score_gemma":0.000035492598,"teacher_disagreement_score":0.075138345,"about_ca_system_score_codex":0.000015325622,"about_ca_system_score_gemma":0.0000072570406,"threshold_uncertainty_score":0.29640707},"labels":[],"label_agreement":null},{"id":"W2769352867","doi":"10.1007/978-1-4939-7343-9_15","title":"Essential Steps in Characterizing Bacteriophages: Biology, Taxonomy, and Genome Analysis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Université Laval","funders":"","keywords":"Annotation; Genome; Computational biology; Biology; Genomics; Comparative genomics; Genetics; Gene","score_opus":0.024604840899973182,"score_gpt":0.36946116160248926,"score_spread":0.3448563207025161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769352867","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83032286,0.000078586985,0.16804719,0.00023177036,0.00019215385,0.0001993546,0.000019941812,0.0000101496435,0.0008979915],"genre_scores_gemma":[0.7401856,0.000094957126,0.25925222,0.0002395806,0.000026283222,0.00006071072,0.000035068337,0.000012179585,0.00009341924],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982071,0.00055615936,0.00032503158,0.00053663313,0.000022788792,0.00035232087],"domain_scores_gemma":[0.9991661,0.000061023708,0.00019808333,0.000506772,0.000004998773,0.00006303766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007256756,0.00017687624,0.00039888045,0.00020398204,0.00013799909,0.00007467941,0.00038475936,0.00018989854,0.00079129793],"category_scores_gemma":[0.00011822446,0.00017087114,0.000103061655,0.0001864826,0.00043560108,0.00014080449,0.00060652406,0.00023912985,0.0000231208],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012116506,0.00003162237,0.060911648,0.0000026117218,0.0000515001,0.000020422405,0.00006250867,0.0000075428416,0.9248456,0.000056049255,5.3939124e-7,0.013997892],"study_design_scores_gemma":[0.0003690928,0.000055195276,0.9371262,0.0000069183293,0.000068389076,0.000013651251,0.000029673634,0.0001660823,0.05012763,0.00028718007,0.0114937555,0.00025623932],"about_ca_topic_score_codex":0.002158631,"about_ca_topic_score_gemma":0.0009643465,"teacher_disagreement_score":0.87621456,"about_ca_system_score_codex":0.00008003348,"about_ca_system_score_gemma":0.0000066892476,"threshold_uncertainty_score":0.86641574},"labels":[],"label_agreement":null},{"id":"W2769357315","doi":"10.1007/978-1-4939-7459-7_9","title":"Detection of oriC-Independent Replication in Escherichia coli Cells","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"DnaA; Origin of replication; SeqA protein domain; Escherichia coli; DNA replication; Biology; Molecular biology; Cell division; Mutant; Chemistry; Cell biology; DNA; Cell; Genetics; Gene","score_opus":0.017376050168996855,"score_gpt":0.3509963497282101,"score_spread":0.33362029955921324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769357315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7685341,0.00025824786,0.2302799,0.000105183,0.000331029,0.0002162649,0.0000060166335,0.0000054339935,0.00026378944],"genre_scores_gemma":[0.8243487,0.0002282963,0.17520694,0.000061191124,0.00004188193,0.000039498093,0.000018009157,0.00001597926,0.00003953548],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836785,0.00040233613,0.00037208424,0.00055880676,0.000045630437,0.00025330024],"domain_scores_gemma":[0.998356,0.0000146747925,0.0002863858,0.0012538699,0.000056467088,0.000032623106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010391591,0.00015015049,0.00026353102,0.00012537748,0.000047023706,0.000013177889,0.00048758063,0.0006285737,0.000005082833],"category_scores_gemma":[0.00046271924,0.00015147965,0.00007233674,0.00010029237,0.00019143565,0.0000022530653,0.0003034447,0.00017861684,0.0000015971352],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007109597,0.00005896635,0.0020152042,0.000009368988,0.000014700238,0.0000030573206,0.000008624807,0.000014755916,0.9691495,0.0002952693,0.0000015677134,0.028357891],"study_design_scores_gemma":[0.00051195954,0.00031897,0.009153893,0.000006040965,0.0000069327134,0.0000034834318,0.0000113461,0.00009111753,0.98461956,0.0014176386,0.003707303,0.00015177633],"about_ca_topic_score_codex":0.00019167947,"about_ca_topic_score_gemma":0.0001879924,"teacher_disagreement_score":0.055814523,"about_ca_system_score_codex":0.000022968074,"about_ca_system_score_gemma":0.000042458843,"threshold_uncertainty_score":0.6177161},"labels":[],"label_agreement":null},{"id":"W2769565216","doi":"10.1007/978-1-4939-7477-1_4","title":"Quantitative Profiling of Chaperone/Client Interactions with LUMIER Assay","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chaperone (clinical); Profiling (computer programming); Scalability; Computational biology; Computer science; Chemistry; Biology; Database; Medicine","score_opus":0.04881804303461258,"score_gpt":0.465060626362053,"score_spread":0.4162425833274404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2769565216","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48476392,0.00036625098,0.51173115,0.00024720503,0.0001268448,0.00025560934,0.000011072621,0.0000056386893,0.002492282],"genre_scores_gemma":[0.5179504,0.00008619101,0.48158732,0.00005542551,0.000035793648,0.000059262064,0.000045133245,0.000018480288,0.000161961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984183,0.0004028098,0.00027370336,0.0004683212,0.0000894939,0.0003473957],"domain_scores_gemma":[0.9987563,0.000055079006,0.00021431314,0.0007358115,0.00017604839,0.00006244112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097446516,0.00017314078,0.00027506356,0.00009561595,0.00010472067,0.000019407176,0.000499978,0.00018507999,0.000015538253],"category_scores_gemma":[0.0008723953,0.00014092594,0.00008363768,0.00009175773,0.0006384314,0.000009160155,0.00025568565,0.00021365663,0.0000026791147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015691589,0.00008600732,0.027081413,0.000024253706,0.00005065453,0.0000075732246,0.000032842792,0.000005610726,0.9665751,0.0015408829,0.000009000246,0.004429786],"study_design_scores_gemma":[0.0004227354,0.00048045983,0.0012576528,0.000042894484,0.000011224594,0.000014981207,0.00019369292,0.00019072134,0.99592876,0.00027232422,0.0010065411,0.00017802644],"about_ca_topic_score_codex":0.00007328184,"about_ca_topic_score_gemma":0.00006277099,"teacher_disagreement_score":0.033186495,"about_ca_system_score_codex":0.000017045937,"about_ca_system_score_gemma":0.000092516086,"threshold_uncertainty_score":0.5746793},"labels":[],"label_agreement":null},{"id":"W2770128356","doi":"10.1007/978-1-4939-7465-8_7","title":"Methods of Exploring Protein–Ligand Interactions to Guide Medicinal Chemistry Efforts","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chemistry; Protein ligand; Computational biology; Nanotechnology; Biology; Biochemistry; Materials science","score_opus":0.2209847682552706,"score_gpt":0.5628647454039558,"score_spread":0.34187997714868523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770128356","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000004246561,0.3938892,0.6037161,0.000056718385,0.0006920447,0.000578061,0.000006738696,0.000032786902,0.0010241613],"genre_scores_gemma":[2.9071157e-7,0.1604563,0.83810806,0.000041573465,0.00010224465,0.0010813487,0.000016000087,0.00004120591,0.00015299389],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99045634,0.005911562,0.0015792855,0.001270749,0.00024050023,0.00054154976],"domain_scores_gemma":[0.9942251,0.0023554466,0.0009966644,0.0020579672,0.00017330283,0.00019150753],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.008766944,0.00059436343,0.0025302283,0.0006545834,0.00009565687,0.00007347139,0.0029716333,0.0003616414,0.000019754809],"category_scores_gemma":[0.00584613,0.00053338445,0.00061585347,0.0007757815,0.00018916377,0.0001781581,0.0019348875,0.000827038,0.000006757377],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000033337196,0.000038095182,6.9952915e-7,0.0018811302,0.000116263,0.0000465284,0.000084458836,0.00011053011,0.008514016,0.0047434727,0.000011169367,0.9844503],"study_design_scores_gemma":[0.00013904774,0.00007065715,0.0000018302911,0.00470171,0.000108924985,0.00013946791,0.0000060739662,0.0007594563,0.027392168,0.011471683,0.9547001,0.0005088731],"about_ca_topic_score_codex":0.000061499144,"about_ca_topic_score_gemma":0.0000025139054,"teacher_disagreement_score":0.98394144,"about_ca_system_score_codex":0.00026558142,"about_ca_system_score_gemma":0.00073209323,"threshold_uncertainty_score":0.99971175},"labels":[],"label_agreement":null},{"id":"W2770209350","doi":"10.1007/978-1-4939-7477-1_20","title":"Computational Analysis of the Chaperone Interaction Networks","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Regina","funders":"Canadian Institutes of Health Research","keywords":"Computational biology; Chaperone (clinical); Epistasis; Budding yeast; Saccharomyces cerevisiae; Biology; DECIPHER; Interactome; Gene; Computer science; Bioinformatics; Genetics","score_opus":0.01763467609211005,"score_gpt":0.375341499117032,"score_spread":0.35770682302492196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770209350","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07703348,0.00022753944,0.9212215,0.00013920823,0.00030321412,0.00009696204,0.000006467099,0.0000018960465,0.0009697128],"genre_scores_gemma":[0.82709783,0.000028180642,0.17243434,0.00027829228,0.00004065504,0.00000893531,0.00006180892,0.0000071963254,0.000042769036],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9990521,0.000268994,0.0002861991,0.00019249602,0.000041853342,0.00015836838],"domain_scores_gemma":[0.9989914,0.00003313158,0.0002922589,0.00061151455,0.00004797596,0.000023770963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006578111,0.00010014532,0.00021611078,0.00007779445,0.00009986722,0.000016863982,0.00043561409,0.00018420363,0.000012870145],"category_scores_gemma":[0.00014856055,0.00007667726,0.00018312238,0.00012865373,0.00020551714,0.0000024423236,0.0003029492,0.0001294518,4.0149018e-7],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010722892,0.000095165815,0.04629326,0.000013037714,0.001479163,0.0000016973445,0.00010635103,0.4089417,0.44984663,0.015032013,0.000103629834,0.07798013],"study_design_scores_gemma":[0.0012149623,0.00026650494,0.12104982,0.000029635718,0.000544055,0.000013199859,0.000081042315,0.7986896,0.054870155,0.015667675,0.007049046,0.00052428164],"about_ca_topic_score_codex":0.000034481967,"about_ca_topic_score_gemma":0.000053537653,"teacher_disagreement_score":0.7500643,"about_ca_system_score_codex":0.000010085566,"about_ca_system_score_gemma":0.000021856127,"threshold_uncertainty_score":0.31268078},"labels":[],"label_agreement":null},{"id":"W2770270652","doi":"10.1007/978-1-4939-7343-9_8","title":"Application of a Virucidal Agent to Avoid Overestimation of Phage Kill During Phage Decontamination Assays on Ready-to-Eat Meats","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agropur cooperative; Agriculture and Agri-Food Canada","funders":"","keywords":"Listeria monocytogenes; Enumeration; Bacteriophage; Human decontamination; Microbiology; Food science; Listeria; Phage display; Bacteria; Biology; Chemistry; Medicine; Escherichia coli; Antibody; Gene; Mathematics; Immunology; Biochemistry; Genetics","score_opus":0.05969467926535505,"score_gpt":0.4477333059655839,"score_spread":0.3880386267002289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770270652","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4829227,0.00006475948,0.51575977,0.000059667236,0.0001425856,0.0004175423,0.000033863136,0.00000534913,0.0005937838],"genre_scores_gemma":[0.74737453,0.000014194996,0.25217152,0.00014618761,0.000036846362,0.00011269127,0.00008363712,0.000024433126,0.000035938217],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978946,0.00060409564,0.0005292925,0.0005920048,0.00011976633,0.0002602716],"domain_scores_gemma":[0.9981439,0.00005041927,0.00040200877,0.0011989488,0.00013257534,0.00007211992],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011435805,0.00021834038,0.00036391898,0.00018945655,0.00008142657,0.000012898347,0.0005502505,0.0002879818,0.0000062934846],"category_scores_gemma":[0.0011871066,0.0002276711,0.00009928085,0.000099318444,0.00010282637,0.0000074708996,0.0004411575,0.00009304326,0.000005858505],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003458348,0.00008542912,0.0021011513,0.000054461503,0.000043195014,0.0000036677873,0.00007937294,0.0006851657,0.9665481,0.0010104962,0.000004596879,0.029038528],"study_design_scores_gemma":[0.0007203159,0.0005651431,0.020620575,0.000033560314,0.000020318676,0.000006189669,0.0000129262025,0.00026949053,0.9763278,0.00050492084,0.00072204525,0.00019675531],"about_ca_topic_score_codex":0.00008597836,"about_ca_topic_score_gemma":0.000039130256,"teacher_disagreement_score":0.26445186,"about_ca_system_score_codex":0.00007431565,"about_ca_system_score_gemma":0.000033443644,"threshold_uncertainty_score":0.9284158},"labels":[],"label_agreement":null},{"id":"W2770274705","doi":"10.1007/978-1-4939-7522-8_23","title":"Recording and Analysis of the Human Clinical Electroretinogram","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal Children's Hospital","funders":"","keywords":"Retina; Erg; Stimulus (psychology); Electroretinography; Ophthalmology; Medicine; Optometry; Computer science; Neuroscience; Biology; Psychology; Cognitive psychology","score_opus":0.036529608660212966,"score_gpt":0.46617377462232357,"score_spread":0.4296441659621106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770274705","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9095414,0.00030428378,0.0878475,0.00018342037,0.00011320079,0.00010437776,0.000001995151,0.0000024837439,0.0019012957],"genre_scores_gemma":[0.8582096,0.00017812129,0.14130364,0.0001578177,0.00001870706,0.00000998442,0.000022823182,0.0000088117185,0.000090490124],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984223,0.0007106212,0.00032438996,0.00032107567,0.000039480055,0.00018213336],"domain_scores_gemma":[0.9990822,0.000038352202,0.00023149009,0.0005824793,0.00003499368,0.000030478655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015008732,0.00010498723,0.00028576102,0.00008589881,0.00012636028,0.000015544685,0.00040461757,0.00019722758,0.0000067835877],"category_scores_gemma":[0.0009363321,0.000078500685,0.00019926026,0.0001320556,0.0004311041,0.0000013673546,0.00032906202,0.00012370487,1.463043e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011473823,0.00001332351,0.52312285,0.0000023223702,0.00015737924,4.9917804e-7,0.0000060952257,0.0000014554028,0.46426955,0.0009801241,0.00000965295,0.011425283],"study_design_scores_gemma":[0.00045163019,0.00018433189,0.7780878,0.00000787756,0.00020496619,0.0000019220345,0.000018228731,0.00010351613,0.21302058,0.0044316556,0.0033064554,0.00018106826],"about_ca_topic_score_codex":0.00005236271,"about_ca_topic_score_gemma":0.00006030268,"teacher_disagreement_score":0.25496495,"about_ca_system_score_codex":0.0000036647089,"about_ca_system_score_gemma":0.000024791096,"threshold_uncertainty_score":0.3201165},"labels":[],"label_agreement":null},{"id":"W2770453206","doi":"10.1007/978-1-4939-7401-6_19","title":"Erratum to: Introduction to Cancer Stem Cells: Past, Present, and Future","year":2017,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"History","score_opus":0.021667000220565877,"score_gpt":0.3879596947402718,"score_spread":0.3662926945197059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770453206","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0045321104,0.099067286,0.562962,0.11425088,0.18132256,0.009260937,0.0011575163,0.00016148643,0.027285205],"genre_scores_gemma":[0.00011940087,0.01687713,0.40068704,0.0030524489,0.10189782,0.0020842669,0.0016110559,0.00056628697,0.47310457],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9944657,0.0017970166,0.00051115133,0.0020174119,0.0002401108,0.0009686132],"domain_scores_gemma":[0.99730796,0.000027166028,0.00024615007,0.0018099219,0.00022856491,0.00038026474],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00148773,0.0006402579,0.0008267793,0.00046014567,0.00015635855,0.000097867305,0.0011296965,0.0017725662,0.000036577756],"category_scores_gemma":[0.000104735416,0.0006210294,0.00017819827,0.00026046284,0.00025334267,0.0000047800336,0.0015020851,0.0011118595,0.000019760892],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008734145,0.00002679781,0.0000394063,0.00008575916,0.00009283098,0.000021656695,0.000027233762,0.00002665513,0.50525546,0.00001633342,0.4563593,0.03796122],"study_design_scores_gemma":[0.00025933544,0.00037326358,0.000076419645,0.00004306342,0.000032151856,0.000017005163,0.000028361555,0.000019491375,0.20686038,0.00012272545,0.7916624,0.00050542416],"about_ca_topic_score_codex":0.00016054633,"about_ca_topic_score_gemma":0.00010827341,"teacher_disagreement_score":0.44581935,"about_ca_system_score_codex":0.00010529532,"about_ca_system_score_gemma":0.00028620966,"threshold_uncertainty_score":0.99962413},"labels":[],"label_agreement":null},{"id":"W2770467375","doi":"10.1007/978-1-4939-7343-9_3","title":"Practical Advice on the One-Step Growth Curve","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":245,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Advice (programming); Computer science; Two step; Mathematics; Applied mathematics; Programming language","score_opus":0.03362087441852599,"score_gpt":0.39389481195878706,"score_spread":0.36027393754026105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770467375","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.093471825,0.00038446856,0.892463,0.007887868,0.0010844251,0.00035352394,0.0000099567205,0.00003222182,0.004312673],"genre_scores_gemma":[0.21801375,0.00024848516,0.77935654,0.0012726838,0.0005581364,0.0000598408,0.000029704323,0.000037798058,0.00042304752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998253,0.00072863174,0.00020217693,0.00046889661,0.00005923092,0.0002880861],"domain_scores_gemma":[0.9987605,0.00003962229,0.00012684065,0.0009615477,0.0000661409,0.000045299348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015636326,0.00017311049,0.00019255136,0.00004985586,0.00015086593,0.000035211317,0.0004111885,0.000259857,0.000016690048],"category_scores_gemma":[0.0037505645,0.0001280739,0.00009011777,0.000059427264,0.00019284953,0.0000029929747,0.00019574995,0.00028455246,0.000013786164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047802492,0.000057621593,0.0003211076,0.000006861876,0.00003736563,0.000004120784,0.000007742622,0.0000074150053,0.980062,0.01547094,0.00051051046,0.0034665226],"study_design_scores_gemma":[0.00027650813,0.00020383317,0.0010964297,0.000012335763,0.000016759503,0.000023739043,0.0000112627085,0.000074830525,0.9423168,0.0011034559,0.054667354,0.00019671158],"about_ca_topic_score_codex":0.00007663241,"about_ca_topic_score_gemma":0.000015201362,"teacher_disagreement_score":0.12454192,"about_ca_system_score_codex":0.000011306119,"about_ca_system_score_gemma":0.000034494828,"threshold_uncertainty_score":0.52227014},"labels":[],"label_agreement":null},{"id":"W2770707017","doi":"10.1007/978-1-4939-7522-8_6","title":"Three-Dimensional Co-Culture Bioassay for Screening of Retinal Gene Delivery Systems","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Bioassay; Neurite; Bioavailability; Gene delivery; Transfection; Retinal; Gene; Biology; Computational biology; Molecular biology; Chemistry; Pharmacology; Biochemistry; In vitro; Genetics","score_opus":0.029327030398990678,"score_gpt":0.37911001362428204,"score_spread":0.34978298322529133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770707017","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18694068,0.002458447,0.8093082,0.00008698503,0.00025144915,0.00036227726,0.000037715894,0.000006425523,0.0005478144],"genre_scores_gemma":[0.13712102,0.00008440562,0.8620438,0.000120697114,0.00008654716,0.00007774749,0.00030517514,0.000027433107,0.0001331908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99848884,0.00026534207,0.00036569784,0.00047028597,0.000087068016,0.00032278468],"domain_scores_gemma":[0.9989344,0.000047774327,0.00029117955,0.0005134322,0.00015592114,0.000057312445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012397512,0.00020671263,0.00033407286,0.00008166176,0.00015669079,0.000024083743,0.00044949734,0.000366113,0.0000055173155],"category_scores_gemma":[0.00060716126,0.00018449292,0.00015889213,0.000044333385,0.00028979432,0.0000039050633,0.00019201163,0.00010823678,0.000001037448],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026481829,0.000029566369,0.021187393,0.00003399041,0.00007667894,0.00000549788,0.000010872616,0.00008566156,0.97193223,0.0007741531,0.00029834837,0.00530077],"study_design_scores_gemma":[0.0016488049,0.0005809372,0.0074041667,0.000056195528,0.000035449324,0.000027884369,0.000039210372,0.0009061359,0.97025687,0.0018073628,0.016809076,0.0004279068],"about_ca_topic_score_codex":0.00009534177,"about_ca_topic_score_gemma":0.000029054383,"teacher_disagreement_score":0.052735586,"about_ca_system_score_codex":0.000009734988,"about_ca_system_score_gemma":0.000070123424,"threshold_uncertainty_score":0.7523403},"labels":[],"label_agreement":null},{"id":"W2770895413","doi":"10.1007/978-1-4939-7386-6_18","title":"Implementation of the NMR CHEmical Shift Covariance Analysis (CHESCA): A Chemical Biologist’s Approach to Allostery","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Allosteric regulation; Chemical shift; Covariance; Nuclear magnetic resonance spectroscopy; Chemistry; Computational biology; Stereochemistry; Biology; Mathematics; Biochemistry; Physical chemistry; Statistics","score_opus":0.03012675938786689,"score_gpt":0.40307244007662046,"score_spread":0.37294568068875356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770895413","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49298877,0.00033860598,0.50501764,0.0004889676,0.000115232324,0.000294965,0.0000361045,0.0000045693487,0.0007151659],"genre_scores_gemma":[0.644109,0.000036915488,0.355392,0.00027676346,0.000039408296,0.0000688609,0.000044876306,0.00001141605,0.000020754309],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979635,0.00048688197,0.00043894857,0.0006550985,0.00008782943,0.0003677808],"domain_scores_gemma":[0.9983554,0.000038577444,0.0003061152,0.0011749692,0.000062815,0.00006213426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011094228,0.00022587515,0.00052594,0.00012658838,0.00009157241,0.000022778495,0.0009455695,0.00026806918,0.000010494059],"category_scores_gemma":[0.00073801295,0.0001706749,0.0003179614,0.00031271175,0.0003661714,0.0000029483926,0.0009585719,0.0001579294,7.960823e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045860652,0.000060438313,0.033794604,0.000008912583,0.00042081883,5.8218205e-7,0.000042537995,0.00002404289,0.9596003,0.0035197055,0.00002719538,0.002454975],"study_design_scores_gemma":[0.0004592106,0.00007687499,0.027112244,0.0000030150452,0.00015824239,0.0000027321391,0.000052965144,0.000045294993,0.9687466,0.0014858108,0.0016448181,0.00021220974],"about_ca_topic_score_codex":0.0002361755,"about_ca_topic_score_gemma":0.0000636073,"teacher_disagreement_score":0.15112025,"about_ca_system_score_codex":0.00002513219,"about_ca_system_score_gemma":0.000050154416,"threshold_uncertainty_score":0.69599205},"labels":[],"label_agreement":null},{"id":"W2770983838","doi":"10.1007/978-1-4939-7386-6_19","title":"High-Efficiency Expression of Yeast-Derived G-Protein Coupled Receptors and 19F Labeling for Dynamical Studies","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Process Research Ortech (Canada); Canada Research Chairs; University of Toronto","funders":"","keywords":"Yeast; Protein expression; Cell biology; Receptor; Biology; Chemistry; Computational biology; Biochemistry; Gene","score_opus":0.030695731710328845,"score_gpt":0.3891719458508525,"score_spread":0.35847621414052366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2770983838","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5179642,0.0014074704,0.48014617,0.00003965691,0.00020303387,0.00022393012,0.0000062436484,0.0000037852408,0.000005493634],"genre_scores_gemma":[0.40476274,0.00018664903,0.5948489,0.00002751753,0.000041768144,0.00006558954,0.000020833459,0.000017957107,0.00002803087],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852675,0.00034227155,0.00033727472,0.00046830397,0.00005659883,0.00026881738],"domain_scores_gemma":[0.9991149,0.000056950983,0.00024540225,0.0004214551,0.00011236593,0.000048935883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011615591,0.00018134063,0.00039863406,0.000064640924,0.00014792552,0.000015131247,0.00028517997,0.00027540175,0.000008631601],"category_scores_gemma":[0.00162465,0.00015634976,0.000089106754,0.000034047647,0.00026942472,0.0000035005073,0.0002965697,0.00009772853,2.1371251e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009969595,0.000030088902,0.00012342689,0.000040782084,0.000035300112,0.0000011822804,0.00005245796,0.000048806975,0.9928525,0.0011114412,0.0000030325398,0.0056012683],"study_design_scores_gemma":[0.00083124056,0.00042304918,0.000037627895,0.00006167487,0.000014717077,0.0000017851401,0.00010923391,0.00077039603,0.99280506,0.004587613,0.0001828251,0.00017477802],"about_ca_topic_score_codex":0.000032461016,"about_ca_topic_score_gemma":0.000008395709,"teacher_disagreement_score":0.11470272,"about_ca_system_score_codex":0.000011734529,"about_ca_system_score_gemma":0.000029557945,"threshold_uncertainty_score":0.6375758},"labels":[],"label_agreement":null},{"id":"W2771012862","doi":"10.1007/978-1-4939-7343-9_6","title":"Encapsulation Strategies of Bacteriophage (Felix O1) for Oral Therapeutic Application","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Bacteriophage; Microbiology; Phage therapy; Biology; Pathogen; Antibiotics; Salmonella; Gastrointestinal tract; Escherichia coli; Bacteria","score_opus":0.029099777346301498,"score_gpt":0.426426052408319,"score_spread":0.3973262750620175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2771012862","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18746632,0.000027017048,0.8108924,0.00009795353,0.00012340872,0.00024537044,0.000008053749,0.0000067942724,0.0011326412],"genre_scores_gemma":[0.63027143,0.0000067924366,0.36956248,0.000042071777,0.000008918697,0.000046794572,0.000012348203,0.0000063533566,0.000042793657],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926037,0.00016881416,0.00019436175,0.00021263528,0.000022947832,0.00014085688],"domain_scores_gemma":[0.9994011,0.000049504622,0.000179593,0.00034281542,0.000009113509,0.000017894807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042114817,0.00008410751,0.00015044153,0.000028711056,0.00008639851,0.000026877517,0.00024238725,0.00009731032,0.0001523273],"category_scores_gemma":[0.000054965865,0.000077264485,0.000060584145,0.000036624897,0.00018419126,0.000115265204,0.00008772328,0.0000645869,0.000008156193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014078602,0.000025481915,0.0007887997,0.0000048163865,0.000006744511,2.8759413e-7,0.00004765814,0.000064231484,0.91770667,0.002037524,0.0000021150818,0.0793016],"study_design_scores_gemma":[0.00045112922,0.00015637677,0.1897038,0.000007948591,0.000023163868,0.000004792787,0.000072114024,0.0022687365,0.7731973,0.025538307,0.008415527,0.00016078024],"about_ca_topic_score_codex":0.00042247394,"about_ca_topic_score_gemma":0.000106088715,"teacher_disagreement_score":0.4428051,"about_ca_system_score_codex":0.000034044857,"about_ca_system_score_gemma":0.0000067449805,"threshold_uncertainty_score":0.31507543},"labels":[],"label_agreement":null},{"id":"W2771463676","doi":"10.1007/978-1-4939-7528-0_13","title":"Techniques for Large-Scale Bacterial Genome Manipulation and Characterization of the Mutants with Respect to In Silico Metabolic Reconstructions","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Genome; Bacterial genome size; Recombinase; Biology; Gene; Plasmid; Computational biology; In silico; Cre recombinase; Genetics; Recombination; Transgene","score_opus":0.01342642374990596,"score_gpt":0.3203406030076117,"score_spread":0.30691417925770575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2771463676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7227962,0.000051005965,0.2764475,0.00011229894,0.00016614182,0.00037582667,0.00003278394,0.0000040413297,0.00001421907],"genre_scores_gemma":[0.65425605,0.00007630877,0.3453051,0.00003935685,0.00013758439,0.00008277115,0.000053290267,0.000016499353,0.000033069635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991641,0.00017798152,0.0001988798,0.000287872,0.000023715855,0.00014743228],"domain_scores_gemma":[0.99942255,0.0000042239185,0.000120855344,0.0003863251,0.00004606803,0.00001999699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057408615,0.00010160329,0.00018673626,0.000092942115,0.000065420216,0.00001335511,0.00014810912,0.00013635405,0.0000018011038],"category_scores_gemma":[0.00020996646,0.00007853768,0.000033325094,0.00008622996,0.0000646492,0.000004893488,0.00008738703,0.000059483056,6.382503e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000880036,0.000017076596,0.0038865206,0.0000107867245,0.000010838856,1.3263784e-7,0.000037907947,0.000007788628,0.98840594,0.00026528892,2.8650703e-7,0.0072694067],"study_design_scores_gemma":[0.0002847564,0.00009984464,0.07449972,0.000014486534,0.000011023165,0.000012055045,0.000008533934,0.000021784666,0.9193378,0.00013224152,0.0054854853,0.00009227046],"about_ca_topic_score_codex":0.000025028286,"about_ca_topic_score_gemma":0.00011972627,"teacher_disagreement_score":0.0706132,"about_ca_system_score_codex":0.0000074185364,"about_ca_system_score_gemma":0.000017611275,"threshold_uncertainty_score":0.32026738},"labels":[],"label_agreement":null},{"id":"W2771914737","doi":"10.1007/978-1-4939-7481-8_17","title":"Microdroplet PCR for Highly Multiplexed Targeted Bisulfite Sequencing","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institutes of Health","keywords":"Bisulfite sequencing; Bisulfite; Amplicon; Computational biology; Methylated DNA immunoprecipitation; Digital polymerase chain reaction; Biology; Primer dimer; Multiple displacement amplification; Illumina Methylation Assay; In silico PCR; Polymerase chain reaction; DNA sequencing; Primer (cosmetics); DNA; DNA methylation; Molecular biology; Genetics; Multiplex polymerase chain reaction; Gene; Chemistry; DNA extraction","score_opus":0.03864114488633355,"score_gpt":0.4021556825251509,"score_spread":0.36351453763881736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2771914737","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33553368,0.0017480158,0.66137326,0.00018518402,0.0004063045,0.000383552,0.00003638999,0.000011919437,0.0003217039],"genre_scores_gemma":[0.26691282,0.00016236056,0.7320322,0.00020144202,0.00014370677,0.00010158742,0.00021843833,0.00004249761,0.00018494805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978969,0.000515052,0.00039441278,0.000672416,0.000057836987,0.00046334884],"domain_scores_gemma":[0.9984439,0.000080017126,0.00027275522,0.0009870682,0.00013284327,0.000083408966],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014766764,0.00024726044,0.0003242296,0.000119252465,0.00022490043,0.00005354934,0.000533354,0.00043587878,0.000007853029],"category_scores_gemma":[0.0020095075,0.00024626186,0.00017740502,0.00006199028,0.00019433971,0.000004361317,0.00024399404,0.00013559424,0.0000027227281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006906242,0.000022721892,0.004189877,0.000016065935,0.000041104162,0.0000046105556,0.000026651387,0.00011263985,0.98053914,0.0005701231,0.000022731232,0.014385262],"study_design_scores_gemma":[0.0010661366,0.00025958123,0.0017012735,0.000009969142,0.000017627432,0.0000026758419,0.000014864548,0.0005439093,0.9640133,0.0048285336,0.02723945,0.00030271048],"about_ca_topic_score_codex":0.00010025317,"about_ca_topic_score_gemma":0.00007212809,"teacher_disagreement_score":0.070658945,"about_ca_system_score_codex":0.00003619954,"about_ca_system_score_gemma":0.00008875512,"threshold_uncertainty_score":0.999999},"labels":[],"label_agreement":null},{"id":"W2772496473","doi":"10.1007/978-1-4939-7507-5_14","title":"GLUT4 Translocation in Single Muscle Cells in Culture: Epitope Detection by Immunofluorescence","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Diabetes Canada; Canadian Diabetes Association","keywords":"GLUT4; Glucose transporter; Green fluorescent protein; Epitope; Cell biology; Transfection; Immunofluorescence; Skeletal muscle; Myocyte; Cell; Biology; Molecular biology; Cell culture; Antibody; Chemistry; Biochemistry; Insulin; Gene; Endocrinology; Immunology","score_opus":0.013618444266303662,"score_gpt":0.34277447903163955,"score_spread":0.3291560347653359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772496473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56476176,0.13841271,0.2953438,0.00005170239,0.00078284583,0.00036825857,0.00001695126,0.000009726232,0.0002522226],"genre_scores_gemma":[0.87452036,0.02789995,0.09670778,0.00042210604,0.00011298011,0.000169287,0.00007646383,0.000041048843,0.000050016948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99778324,0.0008121873,0.00037516348,0.00056820735,0.00006489508,0.00039631795],"domain_scores_gemma":[0.99910444,0.000016949021,0.00014834377,0.00064277375,0.000041434872,0.000046078225],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001054051,0.00020517905,0.00030186068,0.00010617606,0.00006545808,0.00003174826,0.00045457188,0.00042917536,0.000011494728],"category_scores_gemma":[0.00027023882,0.00020866221,0.00008178353,0.00013379197,0.00017088518,0.000009847804,0.00008872084,0.00023614214,0.0000029816033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028646631,0.00006255588,0.00038827898,0.0000075209796,0.0000057492466,0.0000023959408,0.00006138147,0.000020443274,0.6442957,0.000018698158,0.000014560869,0.35509408],"study_design_scores_gemma":[0.00089541904,0.00014443792,0.0016548993,0.000020584393,0.0000056359463,0.000001198868,0.00003320453,0.0000955952,0.94597924,0.00085474487,0.05008324,0.00023182867],"about_ca_topic_score_codex":0.0003799903,"about_ca_topic_score_gemma":0.0006389044,"teacher_disagreement_score":0.35486224,"about_ca_system_score_codex":0.000051948347,"about_ca_system_score_gemma":0.00003758556,"threshold_uncertainty_score":0.8508998},"labels":[],"label_agreement":null},{"id":"W2772512514","doi":"10.1007/978-1-4939-7540-2_4","title":"Measuring mRNA Decay in Budding Yeast Using Single Molecule FISH","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Natural Sciences and Engineering Research Council of Canada; Howard Hughes Medical Institute","keywords":"Messenger RNA; P-bodies; Cell biology; Biology; Molecular biology; In situ hybridization; Oligonucleotide; Transcription (linguistics); Saccharomyces cerevisiae; Cytoplasm; Yeast; Chemistry; DNA; Biochemistry; Gene; Translation (biology)","score_opus":0.08472264273673705,"score_gpt":0.4173599342576052,"score_spread":0.3326372915208682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2772512514","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74383885,0.00029984344,0.25320995,0.00016445253,0.00016674034,0.00017655968,0.0000057344323,0.000007142457,0.0021307287],"genre_scores_gemma":[0.7360747,0.00005273866,0.26341173,0.00018127271,0.00009574577,0.00002416473,0.000014024544,0.000044844146,0.000100802135],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99733496,0.0007445564,0.00038258958,0.00068620767,0.00012353572,0.0007281374],"domain_scores_gemma":[0.9982052,0.000031576466,0.0002095827,0.0013580174,0.000070167494,0.00012544937],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017444132,0.00024706376,0.00035400296,0.00020004278,0.00028803587,0.00013743663,0.0011471492,0.00034521814,0.000010995882],"category_scores_gemma":[0.0019185126,0.00025950544,0.00013042783,0.00009344348,0.00027213214,0.000012276734,0.001171812,0.00031350562,0.0000023148405],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055528133,0.000054454245,0.022602292,0.000014516394,0.000026656964,0.000085947635,0.000015451744,0.00015012726,0.96895456,0.00019854437,0.000006547066,0.007835363],"study_design_scores_gemma":[0.0008356335,0.00013149608,0.004934017,0.000059072096,0.0000069914468,0.000025618985,0.000038976577,0.0015002395,0.99128896,0.0004049344,0.00047447052,0.000299611],"about_ca_topic_score_codex":0.00059078936,"about_ca_topic_score_gemma":0.00048769027,"teacher_disagreement_score":0.022334367,"about_ca_system_score_codex":0.00007765583,"about_ca_system_score_gemma":0.00008487461,"threshold_uncertainty_score":0.9999857},"labels":[],"label_agreement":null},{"id":"W2773035939","doi":"10.1007/978-1-4939-7498-6_17","title":"Isolation and Purification of Villous Cytotrophoblast Cells from Term Human Placenta","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut National de la Recherche Scientifique; Université du Québec à Montréal","funders":"","keywords":"Cytotrophoblast; Percoll; Placenta; Trophoblast; Syncytiotrophoblast; Isolation (microbiology); Human placenta; Andrology; Biology; Cell biology; Cell culture; Pregnancy; Fetus; Medicine; In vitro; Microbiology; Biochemistry; Genetics","score_opus":0.034251344727252296,"score_gpt":0.3920761593404882,"score_spread":0.3578248146132359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773035939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71273124,0.0015998007,0.28370056,0.00017158988,0.0001185409,0.00021604807,0.000011909747,0.000009929406,0.0014403962],"genre_scores_gemma":[0.65785915,0.00016856776,0.34184736,0.000047917718,0.00002109415,0.0000116740885,0.000017322625,0.000006394636,0.000020541629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99911237,0.0003019532,0.000208737,0.0002276989,0.000035539717,0.00011370834],"domain_scores_gemma":[0.9992692,0.00008555979,0.00016728356,0.000427159,0.000024905888,0.00002593019],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032765788,0.00009176261,0.0002820932,0.000060930593,0.000088539666,0.000006492992,0.00010182349,0.00013294374,0.000013217835],"category_scores_gemma":[0.00018160828,0.000080645164,0.000037894653,0.000024420748,0.00021498371,0.000021022142,0.000095012045,0.00011336617,0.0000010383781],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055293203,0.000027619297,0.069709234,0.000022681681,0.000035312834,0.0000063455186,0.00019256373,5.3234663e-7,0.917809,0.00053602905,0.0000033670121,0.011601997],"study_design_scores_gemma":[0.0009301682,0.00017895078,0.25633967,0.00009741758,0.00004813014,0.0000036797423,0.000029333358,0.000084805855,0.7360505,0.0059775566,0.00017791234,0.00008188265],"about_ca_topic_score_codex":0.00015319823,"about_ca_topic_score_gemma":0.000020822286,"teacher_disagreement_score":0.18663044,"about_ca_system_score_codex":0.000014474879,"about_ca_system_score_gemma":0.000010337378,"threshold_uncertainty_score":0.32886142},"labels":[],"label_agreement":null},{"id":"W2773559481","doi":"10.1007/978-1-4939-7498-6_23","title":"Co-culture of H295R Adrenocortical Carcinoma and BeWo Choriocarcinoma Cells to Study Feto-placental Interactions: Focus on Estrogen Biosynthesis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Risks and Factors","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Armand Frappier Museum; Institut National de la Recherche Scientifique; Université du Québec à Montréal","funders":"Canadian Institutes of Health Research","keywords":"Fetus; Estrogen; Endocrine system; Trophoblast; Adrenocortical carcinoma; Placenta; Androgen; Pregnancy; Endocrinology; Internal medicine; Adrenal cortex; Choriocarcinoma; Biology; Hormone; Medicine; Genetics","score_opus":0.034523175618491136,"score_gpt":0.44023754422805733,"score_spread":0.4057143686095662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773559481","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9872654,0.00031324814,0.010465386,0.00033486646,0.00023267606,0.000767547,0.00003552295,0.0000115032135,0.00057386333],"genre_scores_gemma":[0.92624825,0.00002507262,0.07343735,0.00013367261,0.000054951168,0.000049694307,0.0000049564737,0.000019987856,0.000026077263],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842536,0.00042785806,0.0003311238,0.0004589143,0.00009726261,0.00025945727],"domain_scores_gemma":[0.99890435,0.00014115762,0.00013387421,0.00061748136,0.00004406177,0.00015907135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042419278,0.0002042816,0.0005464273,0.00018504684,0.00009635326,0.00001854484,0.00018518773,0.00014778231,0.000059291335],"category_scores_gemma":[0.00042385963,0.00016278666,0.00010707973,0.00008079416,0.00017871046,0.000022278195,0.00010395984,0.0002794822,0.0000051823504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005197821,0.00033444577,0.343452,0.000013052647,0.0000978651,0.000092619004,0.000663494,5.2707725e-7,0.5974026,0.00018617033,0.000018024872,0.057219397],"study_design_scores_gemma":[0.0013307483,0.0021380188,0.26148036,0.000033646436,0.000118925556,0.00003217938,0.0006120893,0.000021149537,0.7332984,0.00021513995,0.00057212444,0.00014715815],"about_ca_topic_score_codex":0.00085488,"about_ca_topic_score_gemma":0.00006691564,"teacher_disagreement_score":0.13589585,"about_ca_system_score_codex":0.0000912909,"about_ca_system_score_gemma":0.00003716326,"threshold_uncertainty_score":0.66382474},"labels":[],"label_agreement":null},{"id":"W2773561460","doi":"10.1007/978-1-4939-7528-0_3","title":"The MONGOOSE Rational Arithmetic Toolbox","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Mongoose; Toolbox; Arithmetic; Computer science; Programming language; Mathematics; Zoology; Biology","score_opus":0.01827348212418058,"score_gpt":0.37820757721190135,"score_spread":0.3599340950877208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2773561460","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15648498,0.0039150016,0.83487743,0.0012676717,0.00048053468,0.00024937832,0.0000052113414,0.000011675327,0.0027081142],"genre_scores_gemma":[0.45052424,0.0003015344,0.5464669,0.000522495,0.0003551549,0.00012941773,0.00007097745,0.000046269393,0.0015830237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997884,0.00089641527,0.00029640767,0.00046875895,0.000084022715,0.00037041676],"domain_scores_gemma":[0.99823517,0.000073894385,0.00018811385,0.0013613419,0.0000776311,0.00006385313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016458173,0.00018212874,0.00021303896,0.000054586777,0.0004439767,0.00008304167,0.0008139377,0.0002450749,0.000011970438],"category_scores_gemma":[0.0010491555,0.00014058928,0.00017618624,0.00007436298,0.00043749993,0.000002741275,0.00029480897,0.00015109632,0.0000074713375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000033022607,0.000025458687,0.009475766,0.0000024418703,0.000114613205,0.000008161777,0.000008390535,0.00035706957,0.931921,0.005011338,0.00016839555,0.05287432],"study_design_scores_gemma":[0.0010504903,0.00024728716,0.029299794,0.000009738051,0.00007973996,0.000053945834,0.000044401968,0.002692878,0.7882036,0.023888553,0.15381841,0.0006111558],"about_ca_topic_score_codex":0.00002591501,"about_ca_topic_score_gemma":0.00010581568,"teacher_disagreement_score":0.29403925,"about_ca_system_score_codex":0.000018031325,"about_ca_system_score_gemma":0.00007207389,"threshold_uncertainty_score":0.57330644},"labels":[],"label_agreement":null},{"id":"W2774056771","doi":"10.1007/978-1-4939-7498-6_20","title":"An Electrical Impedance-Based Assay to Examine Functions of Various Placental Cell Types In Vitro","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Bio-sensing Technologies","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Institut National de la Recherche Scientifique; Université du Québec à Montréal","funders":"Canadian Institutes of Health Research","keywords":"In vitro; Electrical impedance; Cell biology; Function (biology); Apoptosis; Cell type; Cell; Biological system; Biology; Computer science; Chemistry; Neuroscience; Biomedical engineering; Electronic engineering; Engineering; Electrical engineering; Biochemistry","score_opus":0.015609439012234305,"score_gpt":0.3263767714444681,"score_spread":0.31076733243223376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774056771","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33495107,0.0004365894,0.66400415,0.00004280546,0.00013795306,0.00009453045,0.000007009247,0.000074089476,0.00025181775],"genre_scores_gemma":[0.59678197,0.000015963047,0.40313494,0.000027820044,0.000007660742,0.000006878685,0.0000072027783,0.000010834619,0.000006732161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990198,0.00026298437,0.00020512009,0.00021722421,0.000035544326,0.0002593053],"domain_scores_gemma":[0.9993277,0.000107934124,0.000039148195,0.00047601655,0.000017097092,0.00003207139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006147633,0.00012636514,0.00026089657,0.00024212382,0.000031373835,0.000009813251,0.00029232804,0.00024323675,0.0000057870025],"category_scores_gemma":[0.00029579247,0.000118900796,0.000038220576,0.0001601565,0.00009604078,0.00001582033,0.000057764828,0.00021833507,0.0000031930645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035952147,0.000047579342,0.0016002232,0.000008798369,0.0000056636954,0.000015788251,0.000014278923,0.00038934938,0.95660174,0.00006983849,0.000032132677,0.04117865],"study_design_scores_gemma":[0.00032221357,0.00015733259,0.0015123322,0.000006886949,0.0000066955067,0.000003403014,0.000011602636,0.011309095,0.9856907,0.00033966007,0.0005093125,0.0001307638],"about_ca_topic_score_codex":0.000089875604,"about_ca_topic_score_gemma":0.00001815874,"teacher_disagreement_score":0.26183087,"about_ca_system_score_codex":0.00006258008,"about_ca_system_score_gemma":0.000022183356,"threshold_uncertainty_score":0.48486337},"labels":[],"label_agreement":null},{"id":"W2774169697","doi":"10.1007/978-1-4939-7498-6_24","title":"Placental Lipid Transport","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Fonds de Recherche du Québec - Santé; Natural Sciences and Engineering Research Council of Canada; Health Canada; L'Oreal USA","keywords":"Placenta; Nutrient; Transporter; Biology; Essential nutrient; Human placenta; Fetus; Receptor; Glucose transporter; Amino acid; Cell biology; Chemistry; Endocrinology; Biochemistry; Pregnancy; Gene; Ecology; Genetics","score_opus":0.04314623494204566,"score_gpt":0.43023391177087367,"score_spread":0.387087676828828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774169697","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.123554446,0.004008256,0.78407574,0.0027115478,0.0009443507,0.0005054786,0.000011146776,0.00006600015,0.084123045],"genre_scores_gemma":[0.31388062,0.00020746118,0.6848352,0.00061231304,0.00007395064,0.000036981426,0.000011653992,0.000014219338,0.00032760706],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9990569,0.00023948072,0.00017479714,0.0002527613,0.00004255616,0.00023352288],"domain_scores_gemma":[0.9992924,0.00006177843,0.00006274128,0.00052015774,0.000015575342,0.000047354773],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060530915,0.000116040916,0.00033209616,0.00005817038,0.00010272089,0.0000040930486,0.00017747776,0.00015327267,0.000049722836],"category_scores_gemma":[0.00032911528,0.00009682554,0.00009845587,0.000032166707,0.00024034742,0.000019689123,0.00006970255,0.0002104979,0.000007796198],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022279318,0.00010019794,0.5118437,0.00006122978,0.00012218617,0.00032937195,0.00028692838,0.0000011038462,0.4057266,0.0058930595,0.000042531436,0.07537034],"study_design_scores_gemma":[0.0048538297,0.00061243266,0.53957486,0.00030495395,0.00016353883,0.00019998266,0.00009684071,0.000088710745,0.39005807,0.0151044065,0.048467312,0.00047507542],"about_ca_topic_score_codex":0.000046306614,"about_ca_topic_score_gemma":0.000021308982,"teacher_disagreement_score":0.19032618,"about_ca_system_score_codex":0.000018561317,"about_ca_system_score_gemma":0.000027836038,"threshold_uncertainty_score":0.3948431},"labels":[],"label_agreement":null},{"id":"W2774317583","doi":"10.1007/978-1-4939-7514-3_12","title":"A Bloody Primer: Analysis of RNA-Seq from Tissue Admixtures","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Prevention of Organ Failure; University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Transcriptome; RNA-Seq; RNA; Computational biology; Context (archaeology); Biology; Profiling (computer programming); Computer science; Gene expression; Gene; Genetics","score_opus":0.019494641810251578,"score_gpt":0.436978575110731,"score_spread":0.41748393330047945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774317583","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27556893,0.0013158295,0.72126794,0.0001987996,0.000073827825,0.00025061128,0.000100940524,0.00001512304,0.0012080162],"genre_scores_gemma":[0.40918246,0.00021350157,0.5895924,0.00030431,0.000043454536,0.00010609549,0.00043878536,0.000024004154,0.00009501046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99781233,0.0005965926,0.00046387143,0.00073569367,0.00006956799,0.00032191654],"domain_scores_gemma":[0.99751186,0.000050188013,0.0003995032,0.0018691182,0.00008921676,0.00008008826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006934282,0.0002498979,0.0005768701,0.00023659761,0.00011269857,0.000019750332,0.0009674442,0.000558693,0.000065075765],"category_scores_gemma":[0.00052174483,0.00023784729,0.00028205937,0.00022913919,0.00043251604,0.0000026485395,0.00048594273,0.00018196611,0.0000021116962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029203053,0.000085362255,0.0128875775,0.0000036511758,0.00066667784,0.000006977778,0.00001393004,0.000023199102,0.96973723,0.0032103152,0.000035733003,0.013300162],"study_design_scores_gemma":[0.0003203438,0.00019295499,0.012578365,0.0000064429255,0.00036712913,0.0000022957677,0.000007519238,0.00011763019,0.9700126,0.0047236797,0.011420673,0.00025038267],"about_ca_topic_score_codex":0.00082240783,"about_ca_topic_score_gemma":0.00019031306,"teacher_disagreement_score":0.13361353,"about_ca_system_score_codex":0.000010771982,"about_ca_system_score_gemma":0.00005774728,"threshold_uncertainty_score":0.9699131},"labels":[],"label_agreement":null},{"id":"W2774486461","doi":"10.1007/978-1-4939-7498-6_28","title":"A Randomized Double-Blinded Placebo-Controlled Intervention Trial of Melatonin for the Prevention of Preeclampsia in Moderate- and High-Risk Women: The MELPOP Trial","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Toronto","funders":"","keywords":"Randomized controlled trial; Preeclampsia; Medicine; Double blinded; Melatonin; Placebo; Intervention (counseling); Physical therapy; Internal medicine; Pregnancy; Alternative medicine; Psychiatry; Pathology; Biology","score_opus":0.057523239946756885,"score_gpt":0.4229271454815822,"score_spread":0.3654039055348253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774486461","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.634208,0.003453743,0.3508046,0.00056426524,0.00040378462,0.0104004955,0.0000054186557,0.000006190395,0.00015347282],"genre_scores_gemma":[0.9485903,0.0005992326,0.045651637,0.000025240342,0.000059114787,0.0049744644,0.000005348946,0.000013613502,0.00008104774],"study_design_codex":"randomized_trial","study_design_gemma":"randomized_trial","domain_scores_codex":[0.99360013,0.0047472296,0.0010163034,0.00029346495,0.00010526083,0.0002376286],"domain_scores_gemma":[0.99517864,0.0031690004,0.0009708017,0.00058356614,0.00007469375,0.00002329843],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.015678259,0.0001848613,0.0016233906,0.00014007164,0.00013083481,0.00001526104,0.00025388238,0.00024403374,0.000007401207],"category_scores_gemma":[0.0054575317,0.000098184144,0.00044131355,0.00007995537,0.000553241,0.000037681435,0.00014405034,0.00028298434,7.5387824e-8],"study_design_candidate":"randomized_trial","study_design_consensus":"randomized_trial","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.97071576,0.00023501026,0.00008574095,0.00007356418,0.0008498924,0.0000010917648,0.0008686722,0.000031791715,0.002655427,0.0060956352,0.0000013974184,0.01838599],"study_design_scores_gemma":[0.9160332,0.0016707215,0.00009979937,0.00015391113,0.00050253276,0.0000017085356,0.00014413384,0.002730882,0.020660685,0.057905193,0.000017537173,0.00007967831],"about_ca_topic_score_codex":0.0002679513,"about_ca_topic_score_gemma":0.000099981764,"teacher_disagreement_score":0.31438228,"about_ca_system_score_codex":0.000029244084,"about_ca_system_score_gemma":0.000062277824,"threshold_uncertainty_score":0.65335697},"labels":[],"label_agreement":null},{"id":"W277453423","doi":"10.1007/978-1-60327-015-1_3","title":"DNase I Footprinting","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":63,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université de Sherbrooke","funders":"","keywords":"Footprinting; DNA footprinting; DNA; Deoxyribonuclease I; Cleavage (geology); Chemistry; Molecular biology; DNA-binding protein; Biology; Biochemistry; Gene; Base sequence; Transcription factor","score_opus":0.012057530542982475,"score_gpt":0.3737849277379854,"score_spread":0.3617273971950029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W277453423","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5209462,0.0007005275,0.4687005,0.00023597348,0.00010765606,0.0000835125,0.0000012930035,0.000019713214,0.009204655],"genre_scores_gemma":[0.39799806,0.000048714217,0.6001982,0.0013330637,0.00011399056,0.000010865935,0.000031755706,0.000018371946,0.0002469525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985639,0.00028604528,0.00026152842,0.00047331996,0.000047403788,0.0003678362],"domain_scores_gemma":[0.99934715,0.000019614377,0.0000691282,0.00045824522,0.00003216079,0.00007371235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061006536,0.00018157826,0.00020530226,0.000059470316,0.000033726894,0.000010328132,0.00029685578,0.0003057815,0.000018746017],"category_scores_gemma":[0.00039552484,0.0001819598,0.00011159528,0.00013444471,0.00008400945,0.000001281755,0.000112771944,0.00017068372,0.0000040930763],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025125713,0.000044904213,0.0015892632,0.0000038886446,0.000012148605,0.000015442427,0.000010139998,0.000011481218,0.94501865,0.00093664805,0.000057133628,0.052275162],"study_design_scores_gemma":[0.00039000294,0.00018003599,0.00083889614,0.0000065601344,0.000006458462,0.000026844977,0.000019353212,0.000027980781,0.97432584,0.0047348593,0.019225499,0.00021769524],"about_ca_topic_score_codex":0.0000045771367,"about_ca_topic_score_gemma":0.00000101048,"teacher_disagreement_score":0.13149774,"about_ca_system_score_codex":0.00001331973,"about_ca_system_score_gemma":0.000031127074,"threshold_uncertainty_score":0.74201053},"labels":[],"label_agreement":null},{"id":"W2774638683","doi":"10.1007/978-1-4939-7498-6_21","title":"In Vitro Induction of Hypoxia/Reoxygenation on Placental Cells: A Suitable Model for Understanding Placental Diseases","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Interdisciplinary Research in Rehabilitation; Armand Frappier Museum; Institut National de la Recherche Scientifique; Université du Québec à Montréal","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Hypoxia (environmental); Preeclampsia; Oxygenation; Oxidative stress; Inflammation; Placenta; In vitro; Andrology; Biology; Cell biology; Immunology; Pregnancy; Medicine; Chemistry; Internal medicine; Endocrinology; Fetus; Oxygen; Biochemistry","score_opus":0.09753213036271886,"score_gpt":0.41596737475277956,"score_spread":0.3184352443900607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774638683","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.120065615,0.0006915622,0.8768032,0.00039497745,0.0003576454,0.0006762412,0.000064079984,0.000012596048,0.0009340818],"genre_scores_gemma":[0.8037382,0.00006198407,0.19589429,0.000107682674,0.000023809327,0.000072935865,0.000027860904,0.0000124849,0.000060775452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989476,0.00024826065,0.00023607732,0.0002702394,0.00006630353,0.00023150783],"domain_scores_gemma":[0.99932563,0.00021654785,0.0001411639,0.00026215144,0.000019881229,0.000034651082],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005729595,0.0001259993,0.00034363766,0.00018435234,0.000093129864,0.0000064097803,0.0001063975,0.00016054737,0.000003454725],"category_scores_gemma":[0.00056880625,0.00011582098,0.00008674712,0.000057332756,0.00014052547,0.000058965004,0.00007340926,0.00015444867,3.9343098e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0015850585,0.00020085403,0.0023586075,0.000106531836,0.000050219023,0.000010077514,0.00033564318,0.00034804211,0.9859445,0.0070857625,0.000026896978,0.0019478111],"study_design_scores_gemma":[0.004661191,0.00039985334,0.0021946863,0.00022690724,0.00007617515,0.0000079205065,0.0005317789,0.03561827,0.900012,0.0560125,0.000055401026,0.00020329352],"about_ca_topic_score_codex":0.000035164787,"about_ca_topic_score_gemma":0.00001731412,"teacher_disagreement_score":0.68367255,"about_ca_system_score_codex":0.00020056657,"about_ca_system_score_gemma":0.0000530101,"threshold_uncertainty_score":0.47230422},"labels":[],"label_agreement":null},{"id":"W2774960599","doi":"10.1007/7651_2017_112","title":"Multiple Reaction Monitoring Using Double Isotopologue Peptide Standards for Protein Quantification","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University Health Centre; University of Victoria","funders":"Genome British Columbia; Genome Canada","keywords":"Selected reaction monitoring; Chemistry; Isotopologue; Quantitative proteomics; Mass spectrometry; Chromatography; Tandem mass spectrometry; Proteomics; Spectrum analyzer; Fragmentation (computing); Peptide; Analytical Chemistry (journal); Computer science; Biochemistry","score_opus":0.08689450749584249,"score_gpt":0.4841232885298692,"score_spread":0.3972287810340267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2774960599","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18872188,0.000053916017,0.81019205,0.00008980275,0.000056913414,0.00045604806,0.000035669585,0.000052988926,0.0003407497],"genre_scores_gemma":[0.18817405,0.000013675492,0.8107947,0.000004318541,0.00006730429,0.0008305754,0.000026446229,0.000021905962,0.00006700843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990558,0.000055233228,0.00025504013,0.00036305145,0.000048525773,0.0002223607],"domain_scores_gemma":[0.9988186,0.000053558848,0.00028424413,0.0007005138,0.00011342267,0.000029667257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008175352,0.00012409592,0.00018539654,0.000051232484,0.00029566814,0.000032444637,0.00028993707,0.00023062929,0.0000053197964],"category_scores_gemma":[0.000522817,0.00013189577,0.000067211346,0.000037178004,0.0001109995,0.0000604077,0.000083690225,0.00018397758,3.8939376e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007038427,0.000022157212,0.0020203933,0.000031964082,0.000007766906,6.140021e-7,0.000013409588,0.000039661187,0.98307073,0.0055239187,8.8913356e-7,0.0091981385],"study_design_scores_gemma":[0.00047379688,0.000016270387,0.000038535596,0.000037997223,0.000008063813,0.0000024338538,0.00002818053,0.0018863834,0.9648472,0.027614346,0.0049078534,0.00013893144],"about_ca_topic_score_codex":0.0002794546,"about_ca_topic_score_gemma":0.0000105054905,"teacher_disagreement_score":0.022090426,"about_ca_system_score_codex":0.00016547999,"about_ca_system_score_gemma":0.000048522135,"threshold_uncertainty_score":0.5378553},"labels":[],"label_agreement":null},{"id":"W2775067754","doi":"10.1007/978-1-4939-7507-5_4","title":"GLUT Characterization Using Frog Xenopus laevis Oocytes","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Xenopus; Oocyte; Biotinylation; Blot; Voltage clamp; Heterologous; Cell biology; Heterologous expression; Chemistry; Biology; Molecular biology; Biochemistry; Electrophysiology; Neuroscience; Recombinant DNA; Gene","score_opus":0.04004752004632463,"score_gpt":0.3976560838180908,"score_spread":0.3576085637717662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2775067754","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33504066,0.00013480936,0.66340864,0.0001267828,0.00076981797,0.00012479752,0.000007820974,0.000010191173,0.00037650135],"genre_scores_gemma":[0.5261543,0.0001567131,0.47081175,0.0007099704,0.00074246206,0.000039882063,0.00056523137,0.00005731595,0.0007623718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998593,0.0004511518,0.00024655537,0.00040786265,0.000054115306,0.0002473704],"domain_scores_gemma":[0.9990898,0.00001293781,0.00019819166,0.0005727243,0.00007552499,0.000050864408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061932206,0.00016190295,0.0001968539,0.00009753438,0.00018360604,0.00004676703,0.00025602928,0.0003186405,0.00003469843],"category_scores_gemma":[0.0005254679,0.00016095872,0.00008651342,0.000057933434,0.0001372999,0.0000073178467,0.00016856418,0.00009962158,0.0000055129153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049411265,0.00002338727,0.0044869967,0.0000060660686,0.00002013528,0.000003349377,0.000017344024,0.000079797544,0.9803205,0.0005234923,0.0000075791036,0.014461938],"study_design_scores_gemma":[0.00052634557,0.00011161953,0.0036087497,0.0000108807635,0.000012617405,0.000015439924,0.000011560311,0.0039087,0.9676275,0.00077367394,0.02317505,0.00021782756],"about_ca_topic_score_codex":0.000033575052,"about_ca_topic_score_gemma":0.000005491266,"teacher_disagreement_score":0.19259685,"about_ca_system_score_codex":0.000025926513,"about_ca_system_score_gemma":0.000038801463,"threshold_uncertainty_score":0.65637064},"labels":[],"label_agreement":null},{"id":"W2775290940","doi":"10.1007/978-1-4939-7571-6_6","title":"Preparation of Adult Rat Sensory Neuron Cultures and Their Application to Growth Cone Turning Assays","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Axon Guidance and Neuronal Signaling","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Neuroscience; Dorsal root ganglion; Growth cone; Axon; Sensory system; Sensory neuron; Biology; Regeneration (biology); Axon guidance; Neuron; Nerve growth factor; Embryonic stem cell; Anatomy; Cell biology","score_opus":0.038712037234582025,"score_gpt":0.4180350051281511,"score_spread":0.3793229678935691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2775290940","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4801945,0.00004883522,0.5187964,0.00026135065,0.00007575144,0.00021889832,0.0000031224288,0.000013299301,0.00038787373],"genre_scores_gemma":[0.9331973,0.000051832852,0.06560271,0.0010529029,0.00002550281,0.000038526174,0.0000013676007,0.000010881877,0.000018932325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99821484,0.00090067583,0.0002309205,0.0004296286,0.000055953562,0.00016800691],"domain_scores_gemma":[0.9990681,0.00031416633,0.00020791117,0.00031454186,0.00005299508,0.00004228627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000463944,0.00012173798,0.00021108084,0.00007147699,0.00013139014,0.000023046692,0.0002459123,0.000095466945,0.0000018012719],"category_scores_gemma":[0.0028751316,0.000099373305,0.000035165194,0.00007357959,0.0001589773,0.00005941538,0.00013401161,0.00014103414,0.0000017403706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055020206,0.000013887907,0.00088974676,0.000010419538,0.0000016522259,0.0000034242862,0.0001692076,0.00007158313,0.98740935,0.0057557086,0.000003928047,0.005616065],"study_design_scores_gemma":[0.0001827239,0.0001421102,0.0009230282,0.000011882263,0.0000036244674,0.000010385005,0.000018439101,0.0015263957,0.9916064,0.0051980866,0.00028111154,0.00009578039],"about_ca_topic_score_codex":0.000029117602,"about_ca_topic_score_gemma":0.0000057524667,"teacher_disagreement_score":0.45319363,"about_ca_system_score_codex":0.000009661148,"about_ca_system_score_gemma":0.000011209434,"threshold_uncertainty_score":0.40523258},"labels":[],"label_agreement":null},{"id":"W2777191074","doi":"10.1007/978-1-4939-7463-4_13","title":"Comparative Methods for Reconstructing Ancient Genome Organization","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Extant taxon; Genome; Evolutionary biology; Range (aeronautics); Comparative genomics; Biology; Genomics; Genetics; Gene; Engineering","score_opus":0.05473191845736087,"score_gpt":0.4432022352518627,"score_spread":0.38847031679450184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777191074","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24078092,0.0014193793,0.7564071,0.00008625833,0.0003901312,0.00031482594,0.000014866437,0.0000032124774,0.0005833123],"genre_scores_gemma":[0.13210174,0.00009202908,0.8673469,0.00019177215,0.000095284704,0.000058990405,0.000044499935,0.000022361697,0.000046447953],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827224,0.0005583551,0.00029633177,0.0005238244,0.000027737477,0.00032152518],"domain_scores_gemma":[0.9988267,0.000082152495,0.00024280479,0.0006003556,0.00019773703,0.000050254366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014989396,0.00018804526,0.0003521667,0.000064751584,0.00029600415,0.000037178954,0.0004123981,0.00022192809,0.000006904547],"category_scores_gemma":[0.0012794923,0.00018524537,0.000087576416,0.000067406996,0.00023374567,0.000001035175,0.0003302369,0.0000927416,0.0000011591133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019381692,0.000017508319,0.0075014676,0.0000082236165,0.00007186586,5.495131e-7,0.00010161673,0.000062234234,0.97514564,0.0010044285,0.000008194919,0.016058875],"study_design_scores_gemma":[0.0006360486,0.00022584584,0.010489417,0.0000048583315,0.000025494352,0.00001430328,0.00012230496,0.0002488832,0.95863175,0.0046948367,0.024616318,0.00028992468],"about_ca_topic_score_codex":0.000016785856,"about_ca_topic_score_gemma":0.000011482525,"teacher_disagreement_score":0.11093978,"about_ca_system_score_codex":0.000021231184,"about_ca_system_score_gemma":0.00006083823,"threshold_uncertainty_score":0.7554087},"labels":[],"label_agreement":null},{"id":"W2777441381","doi":"10.1007/978-1-4939-7463-4_10","title":"Whole Genome Duplication in Plants: Implications for Evolutionary Analysis","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Biology; Phylogenetic tree; Gene duplication; Context (archaeology); Evolutionary biology; Genome; Phylogenetics; Gene; Genetics; Paleontology","score_opus":0.04303539297330732,"score_gpt":0.37846625573852566,"score_spread":0.33543086276521833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2777441381","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6162282,0.0006020531,0.36779848,0.013185144,0.000098952434,0.00067835033,0.0006033986,0.00002853588,0.0007768498],"genre_scores_gemma":[0.6799216,0.000041478892,0.3184438,0.00020201057,0.000069576796,0.0003754387,0.0008659166,0.0000011046327,0.00007906946],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99907076,0.00019508517,0.00021279376,0.0003093065,0.000023710461,0.00018831214],"domain_scores_gemma":[0.99943113,0.00020880697,0.00011045924,0.00017734503,0.00003917886,0.00003308764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004411772,0.00007858506,0.00017693081,0.000049839404,0.00019719824,0.000024650419,0.00035092977,0.00012036341,0.000036100966],"category_scores_gemma":[0.0002578302,0.00003940393,0.00009972054,0.00024697644,0.00005956406,0.000030551502,0.00008116766,0.00005862895,0.000003857958],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005504717,0.000047140544,0.07411345,8.9260425e-7,0.000024039708,2.8503248e-7,0.000014645645,0.0000882457,0.8997419,0.004166221,0.0000028698048,0.021794802],"study_design_scores_gemma":[0.000118873795,0.00004611667,0.9358709,0.0000015888183,0.000023207453,0.0000012561541,0.0000129895925,0.00062101195,0.0013979906,0.05251594,0.009297621,0.00009249021],"about_ca_topic_score_codex":0.000250496,"about_ca_topic_score_gemma":0.0011393317,"teacher_disagreement_score":0.8983439,"about_ca_system_score_codex":0.000031421387,"about_ca_system_score_gemma":0.000008512475,"threshold_uncertainty_score":0.16068457},"labels":[],"label_agreement":null},{"id":"W2779249506","doi":"10.1007/978-1-4939-7553-2_6","title":"Proteomic Profiling of Secreted Proteins, Exosomes, and Microvesicles in Cell Culture Conditioned Media","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"Canadian Institutes of Health Research; Terry Fox Foundation; Canada Research Chairs; Campbell Institute","keywords":"Microvesicles; Proteomics; Secretory protein; Cell biology; Secretion; Exosome; Proteome; Extracellular; Differential centrifugation; Biology; Quantitative proteomics; Chemistry; Cell culture; Cell; Microvesicle; Biochemistry; microRNA; Gene","score_opus":0.013045320356267995,"score_gpt":0.34476579319455686,"score_spread":0.33172047283828887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2779249506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93166286,0.004725203,0.062292904,0.00006101786,0.000079779784,0.0008353651,0.0000480183,0.000008043162,0.0002868075],"genre_scores_gemma":[0.53949165,0.00017177076,0.45996636,0.00005631712,0.000031489206,0.00010640966,0.00012374493,0.000023931889,0.000028337327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978086,0.00079367275,0.00042585458,0.000579269,0.00006817761,0.00032447503],"domain_scores_gemma":[0.9987677,0.000029166882,0.00031610293,0.0007429152,0.000061979845,0.00008215367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090131233,0.0002316839,0.00035155306,0.000118350465,0.00006995473,0.000022950722,0.00045405893,0.00041561812,0.0000058726973],"category_scores_gemma":[0.0010498784,0.00022605233,0.00008101221,0.00007351886,0.00048511708,0.000007690697,0.0003335818,0.00022529815,8.7558664e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094871866,0.00008410702,0.025051225,0.00009559913,0.000021109883,0.000028028247,0.00009153225,0.0000050085455,0.97199714,0.0005975172,0.0000055550013,0.0019282999],"study_design_scores_gemma":[0.0013525572,0.00015338439,0.0069241775,0.000042025866,0.00001617992,0.000007333539,0.00006133617,0.00005953909,0.98578256,0.0051443065,0.00021391838,0.00024265189],"about_ca_topic_score_codex":0.000046155605,"about_ca_topic_score_gemma":0.000022858756,"teacher_disagreement_score":0.39767346,"about_ca_system_score_codex":0.000017737468,"about_ca_system_score_gemma":0.00008900902,"threshold_uncertainty_score":0.9218146},"labels":[],"label_agreement":null},{"id":"W2781470072","doi":"10.1007/978-1-4939-7463-4_15","title":"Bioinformatic Approaches for Comparative Analysis of Viruses","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Computational biology; Biology; Computer science; Virology","score_opus":0.13184208925618732,"score_gpt":0.4560019808366523,"score_spread":0.324159891580465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2781470072","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21253927,0.00001750993,0.7830524,0.00004033578,0.000060287926,0.00014234567,0.000021697451,0.0000032975822,0.0041228742],"genre_scores_gemma":[0.3486531,0.0000023985199,0.65119946,0.00007149752,0.0000024338403,0.000024899906,0.000008851451,0.0000020623988,0.000035287983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994043,0.00013602943,0.00019549238,0.00013187838,0.000017230044,0.00011507513],"domain_scores_gemma":[0.9994129,0.00009687867,0.0001777355,0.00029008053,0.0000046224673,0.0000178142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003717522,0.000066974375,0.00026038112,0.00008006527,0.00006945551,0.000013055682,0.00023584982,0.000054910775,0.00018005913],"category_scores_gemma":[0.00010352646,0.000056158504,0.00012062672,0.00010944885,0.00025383677,0.0000604659,0.00012944636,0.00004745929,0.0000057708535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000141520995,0.000036917452,0.004514084,0.0000043170394,0.00016510843,2.6911246e-7,0.0003189925,0.00054594275,0.98048043,0.0008355903,0.000011198548,0.013073006],"study_design_scores_gemma":[0.00044230753,0.0001633271,0.15796414,0.000008851722,0.0004363275,0.000002120799,0.0002686609,0.027565137,0.8014633,0.0025293224,0.008907584,0.0002489035],"about_ca_topic_score_codex":0.0003192807,"about_ca_topic_score_gemma":0.00022881952,"teacher_disagreement_score":0.17901711,"about_ca_system_score_codex":0.000022428503,"about_ca_system_score_gemma":0.0000028923403,"threshold_uncertainty_score":0.22900774},"labels":[],"label_agreement":null},{"id":"W2782818644","doi":"10.1007/978-1-4939-7562-4_13","title":"Characterization of Circular RNAs (circRNA) Associated with the Translation Machinery","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Circular RNAs in diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Stem Cell Network","keywords":"Biology; Translation (biology); Computational biology; RNA; microRNA; Biogenesis; Circular RNA; Non-coding RNA; Gene; Genetics; Messenger RNA","score_opus":0.01865706891103567,"score_gpt":0.34342135036962795,"score_spread":0.32476428145859226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2782818644","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4947449,0.00034270732,0.5042651,0.0001211497,0.000079014884,0.00019436379,0.000017597244,0.000008683835,0.00022644967],"genre_scores_gemma":[0.96487004,0.00003606978,0.034087483,0.00044173189,0.00010183847,0.00004428448,0.00035142462,0.000039178805,0.000027935284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99759185,0.0013626124,0.00028412743,0.00039495545,0.00010920075,0.00025722632],"domain_scores_gemma":[0.9990396,0.00006241131,0.00019988898,0.00051001797,0.00014708942,0.000041024614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000998039,0.00018493959,0.0002383404,0.00009737861,0.0000596633,0.000010289056,0.00031413548,0.00023886582,0.000021569094],"category_scores_gemma":[0.00042390818,0.0001407767,0.00010917572,0.00033218926,0.00045834016,0.000004033424,0.00006618296,0.00012291505,0.0000014060503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007466076,0.00006676439,0.0063341977,0.00000869395,0.00010987898,0.0000036099523,0.000059189748,0.000023690167,0.98432755,0.00022278233,0.0000057027382,0.008763274],"study_design_scores_gemma":[0.00066306087,0.00037502623,0.01993528,0.000022332362,0.000058847832,0.000011697587,0.000020056366,0.00029208293,0.9745456,0.000444202,0.0034138174,0.00021797363],"about_ca_topic_score_codex":0.000015682577,"about_ca_topic_score_gemma":0.000039979524,"teacher_disagreement_score":0.47017765,"about_ca_system_score_codex":0.000018932553,"about_ca_system_score_gemma":0.00007137555,"threshold_uncertainty_score":0.5740707},"labels":[],"label_agreement":null},{"id":"W2783825050","doi":"10.1007/978-1-4939-7531-0_5","title":"Dynamic Contrast-Enhanced MRI","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MRI in cancer diagnosis","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Dynamic contrast; Dynamic contrast-enhanced MRI; Contrast (vision); Magnetic resonance imaging; Radiology; Medicine; Computer science; Medical physics; Artificial intelligence","score_opus":0.021168648122149865,"score_gpt":0.45036537605004856,"score_spread":0.4291967279278987,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2783825050","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03375848,0.00073352555,0.9553142,0.002589247,0.00061344675,0.00037392534,0.000004292592,0.00005540945,0.006557459],"genre_scores_gemma":[0.10319819,0.00023761723,0.89314926,0.0030212875,0.00008058139,0.000108299566,0.000011820162,0.000028304856,0.00016462791],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981725,0.0006388206,0.00029707776,0.0004407456,0.00007077952,0.00038006518],"domain_scores_gemma":[0.9990099,0.00025923774,0.00006985732,0.0004750077,0.000098515564,0.00008746291],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000882495,0.00015931865,0.00042544433,0.00017981193,0.000021252228,0.000004796483,0.00015334404,0.00023903693,0.00048605434],"category_scores_gemma":[0.00044655532,0.00014390331,0.00008818959,0.0003200665,0.00035520046,0.00001345182,0.00007168594,0.00023511807,0.000060136794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008958316,0.00006165602,0.0024452582,0.00001834385,0.000049489143,0.00003351284,0.000110055524,0.0000025108172,0.9475336,0.001144518,0.0002018486,0.04830963],"study_design_scores_gemma":[0.0017375433,0.00084353425,0.0030477238,0.00006860788,0.000058945454,0.00004006725,0.000035266174,0.0010203592,0.9549478,0.009389829,0.028597936,0.00021234143],"about_ca_topic_score_codex":0.00004539036,"about_ca_topic_score_gemma":0.000046474386,"teacher_disagreement_score":0.06943972,"about_ca_system_score_codex":0.00012645977,"about_ca_system_score_gemma":0.00007659412,"threshold_uncertainty_score":0.58682066},"labels":[],"label_agreement":null},{"id":"W2784012491","doi":"10.1007/978-1-4939-7595-2_2","title":"Identification of Protease Cleavage Sites and Substrates in Cancer by Carboxy-TAILS (C-TAILS)","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Proteases; Cleavage (geology); Protease; Computational biology; Chemistry; Trypsin; Shotgun proteomics; Proteomics; Enzyme; Peptide; Biochemistry; Proteolysis; Biology","score_opus":0.02190985623847888,"score_gpt":0.4150358924394263,"score_spread":0.39312603620094744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2784012491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63608956,0.00076395634,0.3625276,0.00008553448,0.00000806614,0.00020822092,0.0000340846,0.00002019779,0.00026277654],"genre_scores_gemma":[0.59401554,0.00016675057,0.40525967,0.00003630776,0.000014416685,0.0004287446,0.000021274012,0.00001357177,0.000043699987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990252,0.00012298887,0.0003394933,0.00031342063,0.000031450294,0.0001674438],"domain_scores_gemma":[0.9994351,0.00006329893,0.000157237,0.000271552,0.000043869848,0.00002890102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042661896,0.00010673429,0.00018694386,0.000065537155,0.000023062727,0.0000064839296,0.00015034617,0.00017131452,0.00003375516],"category_scores_gemma":[0.00014148785,0.00010869997,0.000023171693,0.00017633781,0.00024342177,0.000024832507,0.000055762255,0.00014710042,5.9381034e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013765339,0.000035712885,0.014008616,0.000034780118,0.0000052520836,7.4252097e-7,0.000053733085,0.0000020619896,0.9769367,0.0016229427,0.000007725153,0.0072779567],"study_design_scores_gemma":[0.00015359656,0.000022431623,0.00023678422,0.00001836238,0.000005503124,0.0000011038819,0.000030345831,0.0003691349,0.9721937,0.026546879,0.00031730966,0.0001048327],"about_ca_topic_score_codex":0.00022605184,"about_ca_topic_score_gemma":0.000046167064,"teacher_disagreement_score":0.042732075,"about_ca_system_score_codex":0.000034458197,"about_ca_system_score_gemma":0.000019975447,"threshold_uncertainty_score":0.44326562},"labels":[],"label_agreement":null},{"id":"W27844308","doi":"10.1007/978-1-62703-547-7_24","title":"Establishment of Primary Cultures from Ovarian Tumor Tissue and Ascites Fluid","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ovarian cancer diagnosis and treatment","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Université de Montréal; University Health Network; CancerCare Manitoba; Ontario Institute for Cancer Research","funders":"","keywords":"Trypsinization; Ascites; Cryopreservation; Cell culture; Tumor cells; Primary culture; Isolation (microbiology); Tissue culture; Pathology; Cancer research; Biology; Chemistry; Cell biology; Medicine; Trypsin; Internal medicine; In vitro; Bioinformatics; Embryo; Biochemistry","score_opus":0.01562547678630538,"score_gpt":0.3629785031839258,"score_spread":0.34735302639762045,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W27844308","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.776373,0.02288918,0.1882722,0.004947432,0.00041880007,0.0017506145,0.00006107189,0.0000471073,0.0052405596],"genre_scores_gemma":[0.08421574,0.00024318963,0.9139497,0.0012731641,0.00004458007,0.00015369352,0.00006102052,0.000014758144,0.00004414504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879783,0.00035036408,0.00027136266,0.00033218806,0.00006495454,0.00018327092],"domain_scores_gemma":[0.9993257,0.00019380888,0.00007363232,0.00027846044,0.000049407965,0.00007901811],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028055013,0.00014296263,0.00046294523,0.0000962014,0.000015264046,0.00001091865,0.000068468464,0.00010309844,0.00029578785],"category_scores_gemma":[0.00015590231,0.00010573986,0.000046177847,0.00012304238,0.00011481679,0.000025844687,0.00007880108,0.00009713129,0.000004948206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031124822,0.00018568768,0.041664105,0.00003744004,0.00012851652,0.000051310675,0.00014625031,0.0000013350349,0.8732915,0.0014746012,0.00021729954,0.08277084],"study_design_scores_gemma":[0.0020710237,0.00060542946,0.22504126,0.00009304027,0.00012969924,0.000024073926,0.00006706867,0.000034246717,0.7516905,0.011633618,0.00845026,0.00015979697],"about_ca_topic_score_codex":0.0016441101,"about_ca_topic_score_gemma":0.000010518949,"teacher_disagreement_score":0.7256775,"about_ca_system_score_codex":0.000057637815,"about_ca_system_score_gemma":0.000045094053,"threshold_uncertainty_score":0.43119463},"labels":[],"label_agreement":null},{"id":"W2787918827","doi":"10.1007/978-1-4939-7598-3_36","title":"Analysis of Transgenerational Phenotypes Following Acute Starvation in AMPK-Deficient C. elegans","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Transgenerational epigenetics; Starvation; Biology; Phenotype; AMPK; Histone; Genetics; Epigenetics; Gene; Endocrinology","score_opus":0.01737514156369337,"score_gpt":0.3653730394085661,"score_spread":0.34799789784487273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787918827","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.493963,0.00021947318,0.5054506,0.000046662102,0.000121361445,0.00008689359,0.000012110873,0.000003463291,0.00009639898],"genre_scores_gemma":[0.68054086,0.000034688874,0.3188943,0.00023489157,0.000041376097,0.000014066491,0.00020063984,0.000014092566,0.000025051007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980118,0.000609671,0.00046578457,0.00048603903,0.00010624164,0.000320448],"domain_scores_gemma":[0.9993471,0.000031944823,0.00010937602,0.00037433428,0.00009518031,0.000042054508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011366188,0.00017639638,0.00037656236,0.00042003626,0.0000373677,0.000009503504,0.0002393002,0.00025167817,0.00002718299],"category_scores_gemma":[0.00014713858,0.00018253978,0.0002078236,0.0006897159,0.00015835078,0.0000033141823,0.000067623725,0.00010331287,0.0000012594509],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037072914,0.000078721154,0.02914355,0.0000045541774,0.0004086043,0.000003021882,0.00038323953,0.0032695131,0.9642738,0.0007809434,0.000004969712,0.0016119713],"study_design_scores_gemma":[0.00056039036,0.00036113829,0.01501513,0.0000055942064,0.00032773518,0.0000014861395,0.000058419377,0.0059442827,0.9754151,0.0012627622,0.0007917906,0.000256147],"about_ca_topic_score_codex":0.00011481289,"about_ca_topic_score_gemma":0.00086462975,"teacher_disagreement_score":0.18657787,"about_ca_system_score_codex":0.000027670658,"about_ca_system_score_gemma":0.00007682559,"threshold_uncertainty_score":0.74437565},"labels":[],"label_agreement":null},{"id":"W2787972380","doi":"10.1007/978-1-4939-7598-3_35","title":"Evaluating the Role of Host AMPK in Leishmania Burden","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Agence Nationale de la Recherche","keywords":"AMPK; Protein kinase A; In vivo; Leishmania; Biology; Cell biology; Phosphorylation; In vitro; AMP-activated protein kinase; Parasite hosting; Biochemistry","score_opus":0.07973637076886578,"score_gpt":0.5039126081800309,"score_spread":0.42417623741116517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2787972380","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9439728,0.003740188,0.037952982,0.0020436214,0.00013417467,0.00080704305,0.0000026096932,0.00002000223,0.0113265775],"genre_scores_gemma":[0.4766802,0.00008228988,0.52264637,0.00026792145,0.00012435685,0.000081977894,0.0000027172168,0.00002138161,0.00009279971],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963237,0.0023396155,0.00041838136,0.00033640472,0.00018474841,0.00039714013],"domain_scores_gemma":[0.998512,0.0006529801,0.00009803077,0.0005063813,0.00019070289,0.000039894927],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0051003695,0.00013538045,0.00045171133,0.00024297815,0.000043522985,0.0000054921125,0.0002757508,0.0001340181,0.00008052732],"category_scores_gemma":[0.005136918,0.00009186077,0.00007685733,0.00052771176,0.0006276562,0.000015954347,0.0002975374,0.00034815917,0.000012324049],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011237181,0.000038665323,0.03417082,0.000015951184,0.000045158617,0.000013579217,0.0007297134,0.00000383894,0.8786089,0.0017577661,0.0000074239106,0.084495805],"study_design_scores_gemma":[0.002151933,0.0032138417,0.08619234,0.00015839617,0.000053652504,0.000046261845,0.0019125737,0.0049681203,0.8707917,0.023703162,0.006567498,0.00024053497],"about_ca_topic_score_codex":0.0005970926,"about_ca_topic_score_gemma":0.00011485188,"teacher_disagreement_score":0.48469338,"about_ca_system_score_codex":0.00006939679,"about_ca_system_score_gemma":0.00009305256,"threshold_uncertainty_score":0.61497414},"labels":[],"label_agreement":null},{"id":"W2788164539","doi":"10.1007/978-1-4939-7526-6_2","title":"Measurement of Intracranial Pressure in Freely Moving Rats","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Traumatic Brain Injury and Neurovascular Disturbances","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Women and Children’s Health Research Institute","funders":"","keywords":"Intracranial pressure; Catheter; Medicine; Biomedical engineering; Anesthesia; Epidural space; Stroke (engine); Measure (data warehouse); Computer science; Surgery; Physics; Data mining","score_opus":0.09385389224883883,"score_gpt":0.4349551169929539,"score_spread":0.3411012247441151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788164539","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000047586225,0.92880654,0.069053434,0.000023242941,0.000451289,0.0010888868,0.0000124371345,0.000017831331,0.00049872784],"genre_scores_gemma":[0.00003658687,0.7319292,0.26764324,0.00007210434,0.00010347087,0.00013664014,0.000017507828,0.0000449803,0.000016261733],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9934469,0.003993925,0.0012430918,0.0006967607,0.0002444738,0.00037483906],"domain_scores_gemma":[0.9983836,0.00028140203,0.0004155558,0.0007529553,0.000099821504,0.00006667489],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0045598364,0.0004148263,0.0027380395,0.00046153925,0.000016613541,0.000005637036,0.0003626812,0.00069036026,0.000053174837],"category_scores_gemma":[0.002009021,0.0003252741,0.0005659608,0.00052864733,0.0002665087,0.000016895634,0.00012384595,0.0007012942,0.0000045184624],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051844025,0.00018840973,0.00008801551,0.017211422,0.00046198262,0.00012553122,0.00005974417,6.9388443e-7,0.0044621606,0.00036475094,0.000026610618,0.9769588],"study_design_scores_gemma":[0.0014181931,0.00080493547,0.00026709028,0.027863896,0.0020415573,0.00022297194,0.000015530706,0.000031871772,0.004614925,0.001428519,0.9606766,0.00061387836],"about_ca_topic_score_codex":0.000038208775,"about_ca_topic_score_gemma":0.000021304266,"teacher_disagreement_score":0.97634494,"about_ca_system_score_codex":0.00007604766,"about_ca_system_score_gemma":0.00030090744,"threshold_uncertainty_score":0.99991995},"labels":[],"label_agreement":null},{"id":"W2788261306","doi":"10.1007/978-1-4939-7598-3_30","title":"Methods to Evaluate AMPK Regulation of Macrophage Cholesterol Homeostasis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Regulator; Macrophage; AMPK; Homeostasis; Cholesterol; Efflux; Medicine; Biology; Endocrinology; Cell biology; Biochemistry; Phosphorylation; Gene; Protein kinase A","score_opus":0.03900769093757223,"score_gpt":0.4598734014996257,"score_spread":0.42086571056205346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788261306","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27866045,0.0005558284,0.7184064,0.0005059649,0.0005167115,0.00044346336,0.0000058622804,0.000026986447,0.0008783466],"genre_scores_gemma":[0.074776545,0.000023625667,0.92284083,0.0018389765,0.00021518045,0.000047551304,0.000014910122,0.00003553873,0.00020686143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99541163,0.002894947,0.00062348513,0.0005326592,0.00014678734,0.00039051316],"domain_scores_gemma":[0.9985027,0.00019693474,0.00016228945,0.0007378829,0.00023295813,0.00016724369],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0043949303,0.00023023922,0.0007508389,0.00050487806,0.00003153157,0.000007726529,0.00019604134,0.00027742854,0.00019298773],"category_scores_gemma":[0.0013372229,0.0001968991,0.00015479336,0.0007226141,0.00025981865,0.0000292028,0.00016375702,0.0002315262,0.000027642402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014114144,0.000049287402,0.00097520655,0.000024710193,0.000034519286,0.0000028030763,0.00026312194,0.0000050246185,0.63707566,0.000391002,0.000017605607,0.36101994],"study_design_scores_gemma":[0.001656591,0.00063793646,0.075057834,0.000059315502,0.00011670562,0.000036652462,0.000033669563,0.00033177764,0.8921721,0.0031398889,0.026584126,0.00017337427],"about_ca_topic_score_codex":0.00006461813,"about_ca_topic_score_gemma":0.000008180562,"teacher_disagreement_score":0.36084655,"about_ca_system_score_codex":0.00004978011,"about_ca_system_score_gemma":0.000055382818,"threshold_uncertainty_score":0.80293125},"labels":[],"label_agreement":null},{"id":"W2788412936","doi":"10.1007/978-1-4939-7634-8_5","title":"Identification of New Bacterial Small RNA Targets Using MS2 Affinity Purification Coupled to RNA Sequencing","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"RNA; Translation (biology); Transfer RNA; Biology; Computational biology; Messenger RNA; Small RNA; microRNA; Gene; Genetics","score_opus":0.04802918513095736,"score_gpt":0.37574613000022156,"score_spread":0.32771694486926417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788412936","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5056159,0.000008382087,0.4937175,0.00005096001,0.00035709905,0.00013158542,0.0000036177616,0.0000076698725,0.00010728577],"genre_scores_gemma":[0.34364393,0.0000034336797,0.6560524,0.00014196211,0.00006785766,0.0000068653926,0.000008998655,0.000010908896,0.0000636512],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857295,0.00041947686,0.00041781948,0.00033603495,0.00004181406,0.00021188852],"domain_scores_gemma":[0.9993632,0.000043933986,0.00020124706,0.00029757153,0.000026511005,0.00006756218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008410671,0.000112760325,0.00018304182,0.00008599337,0.0000597398,0.000017797896,0.00022145855,0.00012390675,0.0006710885],"category_scores_gemma":[0.00031568966,0.00011676325,0.00005279067,0.00028579158,0.00013437103,0.00006514675,0.0001413575,0.00009958767,0.000055112785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030227457,0.00002289747,0.00009310444,0.0000027297885,0.000007253265,8.831262e-7,0.00032905728,0.00015114334,0.98973393,0.000055543533,0.00001232785,0.009560889],"study_design_scores_gemma":[0.00014454621,0.00006952719,0.004015351,0.000008857569,0.000012966654,0.0000050739327,0.000029405013,0.0014090628,0.99261165,0.000609663,0.00097051414,0.000113371694],"about_ca_topic_score_codex":0.0020627019,"about_ca_topic_score_gemma":0.0002837257,"teacher_disagreement_score":0.16233492,"about_ca_system_score_codex":0.00021386537,"about_ca_system_score_gemma":0.000032946067,"threshold_uncertainty_score":0.73479486},"labels":[],"label_agreement":null},{"id":"W2788566184","doi":"10.1007/978-1-4939-7565-5_7","title":"Immunohistochemical Detection of the Retinoblastoma Protein","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Retinoblastoma; Immunohistochemistry; Retinoblastoma protein; Protein detection; Cancer research; Computational biology; Biology; Immunology; Cancer; Gene; Genetics; Nanotechnology; Materials science; Cell cycle","score_opus":0.01299132641985766,"score_gpt":0.365757076770994,"score_spread":0.35276575035113633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788566184","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4530593,0.00037811627,0.54426587,0.00016908551,0.00026327968,0.00049445004,0.0000013704167,0.000022218348,0.0013463493],"genre_scores_gemma":[0.68037266,0.0000028626494,0.31920618,0.00020725271,0.00005476087,0.000060732727,0.000002001494,0.000023288438,0.00007024186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834335,0.000729747,0.00032481895,0.00028549947,0.00009414925,0.00022243764],"domain_scores_gemma":[0.9991074,0.000041433737,0.00012723362,0.00057624374,0.00011085518,0.00003679496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069349,0.00012484081,0.0002749266,0.00011465728,0.00003099623,0.0000017352077,0.0001643501,0.00029411665,0.000036620855],"category_scores_gemma":[0.0010842324,0.000094273135,0.00014551585,0.00044935592,0.00053656223,0.0000067360306,0.00012423846,0.00036178372,0.000006066717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001891567,0.000037783833,0.000098438104,0.000018270992,0.000027511334,0.000005688083,0.00006105346,7.1453195e-7,0.9805988,0.0003260929,0.0000042915062,0.018632175],"study_design_scores_gemma":[0.00068874913,0.0005294508,0.00050858536,0.000081105165,0.000031004172,0.00008000166,0.000012143886,0.00013276836,0.9938212,0.0016768872,0.0023528538,0.00008522166],"about_ca_topic_score_codex":0.000042539574,"about_ca_topic_score_gemma":0.000008483295,"teacher_disagreement_score":0.2273134,"about_ca_system_score_codex":0.00012378435,"about_ca_system_score_gemma":0.000092006565,"threshold_uncertainty_score":0.38443467},"labels":[],"label_agreement":null},{"id":"W2788628478","doi":"10.1007/978-1-4939-7598-3_4","title":"Biochemical Measurement of Glycogen: Method to Investigate the AMPK-Glycogen Relationship","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycogen Storage Diseases and Myoclonus","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Myrovlytis Trust; McGill University","keywords":"Glycogen; Glycogen phosphorylase; Glycogen branching enzyme; Glycogen debranching enzyme; Glycogen synthase; Biochemistry; Phosphorylase kinase; AMPK; Glycogenesis; Chemistry; Biology; Enzyme; Protein kinase A","score_opus":0.06623480663305864,"score_gpt":0.43521422731239623,"score_spread":0.3689794206793376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788628478","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14894679,0.0014451524,0.8456161,0.0019547543,0.0002340852,0.00067463046,0.000009700818,0.000028454959,0.0010903382],"genre_scores_gemma":[0.19383965,0.0000055214496,0.8035978,0.002270133,0.00010709474,0.00007886617,0.000012280969,0.000026017873,0.000062634295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99683845,0.0016055565,0.00050013047,0.00045475297,0.00023305298,0.0003680315],"domain_scores_gemma":[0.9984185,0.00021873931,0.00012175864,0.0006708438,0.00034365745,0.00022647822],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033547187,0.00020348954,0.00044242188,0.00020726545,0.000059252743,0.0000058738487,0.00026226402,0.0002148206,0.00006686204],"category_scores_gemma":[0.003513071,0.00014408916,0.00018685934,0.00066696166,0.00034832477,0.000011540791,0.00016231775,0.00023712673,0.000025823594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002548284,0.00007278046,0.0042291917,0.000029728932,0.00009656513,0.00007784605,0.0002273027,0.0000042852635,0.9820394,0.004616442,0.00035944392,0.007992222],"study_design_scores_gemma":[0.0009067017,0.00061715976,0.0026848796,0.00006890637,0.0002269123,0.00017984897,0.00010207303,0.0001729302,0.9658314,0.009208793,0.019794183,0.00020619029],"about_ca_topic_score_codex":0.00010578783,"about_ca_topic_score_gemma":0.0000071716654,"teacher_disagreement_score":0.04489285,"about_ca_system_score_codex":0.00008931912,"about_ca_system_score_gemma":0.00017933035,"threshold_uncertainty_score":0.58757854},"labels":[],"label_agreement":null},{"id":"W2788680138","doi":"10.1007/978-1-4939-7598-3_34","title":"Analysis of Muscle Stem Cell Fate Through Modulation of AMPK Activity","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"MyoD; Stem cell; Cell biology; AMPK; Biology; Myocyte; Skeletal muscle; Flow cytometry; Cancer research; Protein kinase A; Myogenesis; Kinase; Immunology; Anatomy","score_opus":0.024941456537846875,"score_gpt":0.3781873953605786,"score_spread":0.35324593882273175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2788680138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54915804,0.00015364354,0.44983682,0.0000110679875,0.000056111807,0.0000723738,0.000011126387,0.0000029349271,0.0006978811],"genre_scores_gemma":[0.9000581,0.00004891371,0.099685065,0.00008881739,0.000019591189,0.000011019841,0.000055032888,0.000010779494,0.00002272216],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998015,0.0009902988,0.0003175499,0.00041145078,0.000050636398,0.00021508132],"domain_scores_gemma":[0.9990609,0.00005731712,0.00024216752,0.0005067658,0.00010700766,0.00002579998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005523585,0.00014702264,0.00041698109,0.00017009705,0.00002620685,0.0000015687979,0.00020957702,0.00030868113,0.000030852945],"category_scores_gemma":[0.00007295862,0.00014313117,0.0002112072,0.00054569606,0.00038221438,0.0000035148898,0.00013274472,0.00008227255,8.903143e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014773366,0.0001145704,0.005851784,0.000017630231,0.00022624547,3.5716675e-7,0.00010177899,0.0007723167,0.97945285,0.00037693483,0.0000046629466,0.012933167],"study_design_scores_gemma":[0.000365324,0.0004456232,0.033562,0.0000031093293,0.00012102484,2.1792195e-7,0.00004521536,0.0015973797,0.9617584,0.0016134115,0.0003511896,0.00013715545],"about_ca_topic_score_codex":0.00013270618,"about_ca_topic_score_gemma":0.00005498672,"teacher_disagreement_score":0.35090002,"about_ca_system_score_codex":0.0000074191,"about_ca_system_score_gemma":0.00003437611,"threshold_uncertainty_score":0.5836719},"labels":[],"label_agreement":null},{"id":"W2789294348","doi":"10.1007/978-1-4939-7714-7_10","title":"Isolation and Culture of Mouse Placental Endothelial Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Heart and Stroke Foundation; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"CD31; Cell sorting; Cell biology; Biology; Endothelial stem cell; Vasculogenesis; Green fluorescent protein; Transgene; Progenitor cell; Molecular biology; Angiogenesis; Stem cell; Flow cytometry; Gene; Genetics; In vitro","score_opus":0.020930371965621974,"score_gpt":0.3775301972627407,"score_spread":0.3565998252971187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789294348","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19156927,0.002447832,0.8006772,0.00013306257,0.00020788795,0.00026566593,0.000020365724,0.000018250665,0.004660508],"genre_scores_gemma":[0.13974002,0.00018777743,0.85951996,0.00023337294,0.00004784461,0.000007558471,0.0000062302734,0.000006909092,0.00025034885],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923366,0.00032087736,0.00014552815,0.0001556482,0.000029511339,0.000114759656],"domain_scores_gemma":[0.9997227,0.000060868802,0.000045187815,0.00011929256,0.000029083554,0.00002284357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029412145,0.00007666936,0.00021549336,0.00005514001,0.000020034926,0.000001206906,0.00003626343,0.00012267848,0.000017697852],"category_scores_gemma":[0.00013466235,0.00005992164,0.000032602038,0.0000691983,0.00023397435,0.000009963116,0.000053957698,0.00009573196,0.0000017526371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012537533,0.000024305582,0.008335554,0.000024385456,0.000029220764,0.0000037717184,0.0008615557,2.3000254e-7,0.98494524,0.0005976061,0.000029441653,0.0050233174],"study_design_scores_gemma":[0.00084926444,0.0004430281,0.0007624505,0.000033547454,0.000024602627,0.000014790174,0.0000861579,0.0000971043,0.99361926,0.0022719286,0.0017384908,0.0000593472],"about_ca_topic_score_codex":0.000017160126,"about_ca_topic_score_gemma":0.000005914592,"teacher_disagreement_score":0.058842774,"about_ca_system_score_codex":0.000009203175,"about_ca_system_score_gemma":0.000011204343,"threshold_uncertainty_score":0.24435335},"labels":[],"label_agreement":null},{"id":"W2789324586","doi":"10.1007/978-1-4939-7780-2_20","title":"Correlative Live Imaging and Immunofluorescence for Analysis of Chromosome Segregation in Mouse Preimplantation Embryos","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Chromothripsis; Biology; Micronucleus test; Centromere; Genetics; Chromosome segregation; Embryo; Chromosome; Cell biology; Genome instability; DNA; DNA damage; Gene; Chemistry","score_opus":0.02477465206157291,"score_gpt":0.40231704549418246,"score_spread":0.37754239343260954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789324586","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39060754,0.00035540905,0.60869867,0.000032811575,0.000028244856,0.00019548228,0.00001892293,0.000006027106,0.000056891706],"genre_scores_gemma":[0.5606282,0.000029489205,0.43915692,0.000063971325,0.000007197754,0.000021139085,0.0000797714,0.000004629422,0.000008712919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990913,0.00031350608,0.00023266222,0.0001983051,0.00003702328,0.00012718712],"domain_scores_gemma":[0.9990202,0.0006411468,0.0001003673,0.00012334474,0.0000899998,0.000024947867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057243294,0.00007543463,0.0002859478,0.0003483323,0.00001562037,0.0000029279238,0.000043151165,0.000081173406,0.0000057881252],"category_scores_gemma":[0.0016856634,0.000068862035,0.000042869913,0.0003740825,0.0001565136,0.000025247069,0.00003370782,0.000084703584,4.0968914e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002648133,0.000042737724,0.16786684,0.00002864313,0.00014781232,0.000008506923,0.00094708457,0.00006682335,0.7849059,0.0013685876,0.000001934932,0.044350293],"study_design_scores_gemma":[0.0020390844,0.0007349125,0.182952,0.00014534238,0.0005717239,0.000021064683,0.00034890074,0.15314567,0.65558666,0.0042587537,0.000017364317,0.00017852649],"about_ca_topic_score_codex":0.00034101683,"about_ca_topic_score_gemma":0.000051152223,"teacher_disagreement_score":0.17002064,"about_ca_system_score_codex":0.00003152346,"about_ca_system_score_gemma":0.00002452637,"threshold_uncertainty_score":0.28081122},"labels":[],"label_agreement":null},{"id":"W2789329659","doi":"10.1007/978-1-4939-7710-9_6","title":"RNA-Seq-Based Transcript Structure Analysis with TrBorderExt","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Shenzhen Peacock Plan","keywords":"RNA-Seq; Computational biology; Biology; Genetics; Transcriptome; Gene; Gene expression","score_opus":0.012805901042018796,"score_gpt":0.34078218390111037,"score_spread":0.3279762828590916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789329659","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41097096,0.0009662325,0.5870208,0.00013018031,0.00010149,0.00013751685,0.000031786596,0.0000043486066,0.0006366471],"genre_scores_gemma":[0.5725719,0.000023580846,0.42657474,0.000633107,0.00007028502,0.000018948616,0.000050235216,0.000020667128,0.000036536963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804485,0.00056101155,0.00027260504,0.00065384427,0.00006751591,0.00040020264],"domain_scores_gemma":[0.9991179,0.000030163146,0.00008917371,0.00057073374,0.00012204121,0.000069998656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038981048,0.00026956014,0.0004000908,0.00021259258,0.000074098796,0.000013533499,0.00030134505,0.00027323738,0.000058565154],"category_scores_gemma":[0.00007968249,0.00021972228,0.00016717576,0.0005802765,0.00039324726,4.415365e-7,0.000066651126,0.00012600845,0.0000013403712],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013541516,0.000030891842,0.010147558,0.0000060062457,0.000532067,0.0000049991404,0.00005238636,0.0005184657,0.9826394,0.0003093856,0.000014444028,0.0056090388],"study_design_scores_gemma":[0.00093714404,0.0010041753,0.0049901665,0.0000040963605,0.00026807204,0.000005370593,0.00004177858,0.00047156785,0.97712696,0.0016259501,0.013143641,0.00038105747],"about_ca_topic_score_codex":0.000072848794,"about_ca_topic_score_gemma":0.0005682541,"teacher_disagreement_score":0.16160093,"about_ca_system_score_codex":0.000013318707,"about_ca_system_score_gemma":0.00007829073,"threshold_uncertainty_score":0.89600146},"labels":[],"label_agreement":null},{"id":"W2789372487","doi":"10.1007/978-1-4939-7714-7_9","title":"Isolating Embryonic Cardiac Progenitors and Cardiac Myocytes by Fluorescence-Activated Cell Sorting","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Embryonic stem cell; Cell sorting; Myocyte; Cell biology; Embryonic heart; Progenitor cell; Biology; Cardiac myocyte; Cell; Molecular biology; Stem cell; Flow cytometry; Genetics; Gene","score_opus":0.014143272467323668,"score_gpt":0.3685176373985913,"score_spread":0.3543743649312676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789372487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9639597,0.0072079836,0.027065296,0.000051887742,0.00031577706,0.000511287,0.000022440825,0.000027287784,0.0008383428],"genre_scores_gemma":[0.7528443,0.00027078603,0.24597508,0.00006347192,0.0002722163,0.00010810773,0.000092035,0.00007196987,0.00030205617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963645,0.0017072081,0.00032886557,0.00078803947,0.000112618654,0.00069879746],"domain_scores_gemma":[0.9990255,0.00013079969,0.000097310905,0.00046148358,0.00014100327,0.00014389264],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013156094,0.00027909942,0.00039522472,0.00012705126,0.00014152515,0.000034992536,0.00023629215,0.0003985243,0.0000118182825],"category_scores_gemma":[0.0007508801,0.00027778916,0.00014387941,0.00032433163,0.0004251455,0.000005689369,0.00046110284,0.00030476644,0.000007675695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005185124,0.000025072179,0.016428078,0.000024950938,0.000063011714,0.0000036220597,0.000052882246,5.4310993e-7,0.9489149,0.000025666674,0.00008753556,0.034321923],"study_design_scores_gemma":[0.0002826385,0.00054944184,0.0004453034,0.000012047281,0.000017642336,0.0000041747708,0.00008410742,0.00014197154,0.991881,0.0001378589,0.006140281,0.00030349763],"about_ca_topic_score_codex":0.00008982038,"about_ca_topic_score_gemma":0.0000044300928,"teacher_disagreement_score":0.21890979,"about_ca_system_score_codex":0.000036547546,"about_ca_system_score_gemma":0.000107974025,"threshold_uncertainty_score":0.99996746},"labels":[],"label_agreement":null},{"id":"W2789506323","doi":"10.1007/978-1-4939-7765-9_9","title":"Proteomics Analysis of Colorectal Cancer Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Colorectal cancer; Proteomics; Cancer; Medicine; Computational biology; Cancer research; Biology; Internal medicine; Genetics; Gene","score_opus":0.01753891654872043,"score_gpt":0.4194195729604585,"score_spread":0.4018806564117381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789506323","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24055007,0.0000601635,0.7578876,0.000028752556,0.000016157634,0.00010128253,0.00003755578,0.000022315951,0.0012960837],"genre_scores_gemma":[0.04163599,0.000043954235,0.9579105,0.00005226741,0.000017554143,0.00027650187,0.000015555703,0.000011659405,0.00003603454],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99919605,0.00008621188,0.00025646694,0.00026375134,0.000030427407,0.00016710082],"domain_scores_gemma":[0.999428,0.0000647208,0.00014002509,0.00027320592,0.00006814319,0.000025901356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002741258,0.00009627266,0.00028740527,0.0001399896,0.000022800346,0.000002493172,0.00021536161,0.00017575546,0.00028516195],"category_scores_gemma":[0.0000564581,0.000093636045,0.00010152714,0.00058058236,0.00022163971,0.000008122329,0.00008587073,0.00012773223,9.516912e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016983908,0.000026285732,0.0021620588,0.0000074386053,0.000115465526,5.416862e-7,0.00003454355,0.00008778591,0.9896954,0.0033999544,0.0000023858531,0.004451121],"study_design_scores_gemma":[0.00008552891,0.000024982533,0.0000464002,0.0000048316792,0.00009490449,3.568697e-7,0.000008230131,0.0029065828,0.9861637,0.009787468,0.00078026816,0.00009677982],"about_ca_topic_score_codex":0.00012153039,"about_ca_topic_score_gemma":0.000035177713,"teacher_disagreement_score":0.20002286,"about_ca_system_score_codex":0.000043289758,"about_ca_system_score_gemma":0.00002730969,"threshold_uncertainty_score":0.3818367},"labels":[],"label_agreement":null},{"id":"W2789595118","doi":"10.1007/978-1-4939-7714-7_11","title":"Flow Cytometry and Lineage Tracing Study for Identification of Adipocyte Precursor Cell (APC) Populations","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Flow cytometry; Cell sorting; Adipocyte; Immunophenotyping; Biology; Cell biology; Adipose tissue; Cell; Cytometry; Molecular biology; Biochemistry","score_opus":0.05384671248979632,"score_gpt":0.45604073593251576,"score_spread":0.40219402344271943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789595118","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37560865,0.0010561543,0.62233996,0.000034333945,0.00018156697,0.0006599146,0.000009132618,0.000010991232,0.000099314515],"genre_scores_gemma":[0.47964838,0.000011904375,0.51997626,0.00004605777,0.000071216215,0.00004507049,0.000018265375,0.00001270084,0.00017017049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858946,0.00043844996,0.00044145883,0.00030165305,0.00005425524,0.00017475236],"domain_scores_gemma":[0.9992488,0.0001358103,0.00014396069,0.00029265753,0.00012497163,0.000053804397],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014598052,0.0001111473,0.00037075512,0.00029514584,0.00004052789,0.000004486272,0.00006970472,0.0001370566,0.000013305637],"category_scores_gemma":[0.0006846547,0.000101332975,0.000057822886,0.0002924527,0.00011236124,0.000024382533,0.000035097433,0.00010360879,0.0000020103696],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098012766,0.00023759207,0.009502817,0.000061012684,0.000045294313,0.0000033779415,0.00086424145,0.000006740454,0.9579887,0.000359283,0.000008250101,0.03082472],"study_design_scores_gemma":[0.002011039,0.0010146871,0.040324714,0.000022285798,0.00036471218,0.000012606562,0.00022143363,0.003705155,0.94960105,0.0014913178,0.0010980635,0.00013295234],"about_ca_topic_score_codex":0.000023091769,"about_ca_topic_score_gemma":0.000010944926,"teacher_disagreement_score":0.10403972,"about_ca_system_score_codex":0.000013137511,"about_ca_system_score_gemma":0.00002602596,"threshold_uncertainty_score":0.4132239},"labels":[],"label_agreement":null},{"id":"W2789710675","doi":"10.1007/978-1-4939-7714-7_6","title":"Live Imaging of Fetal Intra-abdominal Organs Using Two-Photon Laser-Scanning Microscopy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Heart and Stroke Foundation; Hospital for Sick Children","funders":"","keywords":"Fetus; Umbilical cord; Organogenesis; Two-photon excitation microscopy; Anatomy; Intravital microscopy; Pathology; Embryo; Medicine; Biology; Radiology; Pregnancy; Microcirculation; Cell biology; Physics; Optics","score_opus":0.02860079498864593,"score_gpt":0.4216696474647203,"score_spread":0.39306885247607437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2789710675","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45952398,0.0019341231,0.53683704,0.00009782845,0.0002560868,0.00018702341,0.0000048880433,0.000017755408,0.001141279],"genre_scores_gemma":[0.3329103,0.000024766408,0.6665852,0.00036748042,0.00007075202,0.000007596498,0.000004693817,0.000017306038,0.0000118852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981257,0.0007165822,0.00037333742,0.0003565032,0.00006482776,0.0003631053],"domain_scores_gemma":[0.99922174,0.00018462089,0.00013580908,0.00029883362,0.0001066174,0.000052361698],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009702366,0.00018855066,0.0005387404,0.00018442325,0.00006831989,0.0000046842033,0.00013158015,0.00011080705,0.00007374238],"category_scores_gemma":[0.0004760917,0.00016988892,0.00010260286,0.00027019126,0.0006213373,0.00002645406,0.0001589711,0.00025378785,0.0000043717264],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018106059,0.000040167673,0.07733291,0.00005086838,0.00008151133,0.000070760594,0.0009880315,0.0000032499856,0.91222477,0.00012304011,0.000006450835,0.008897159],"study_design_scores_gemma":[0.0012588089,0.0002685971,0.0017091832,0.00031798004,0.00012197226,0.0001539254,0.00033289497,0.001739337,0.99145406,0.0022737929,0.00020409748,0.00016536759],"about_ca_topic_score_codex":0.00026613192,"about_ca_topic_score_gemma":0.000027977168,"teacher_disagreement_score":0.12974817,"about_ca_system_score_codex":0.000055798504,"about_ca_system_score_gemma":0.00008628496,"threshold_uncertainty_score":0.69278693},"labels":[],"label_agreement":null},{"id":"W2790186604","doi":"10.1007/978-1-4939-7765-9_2","title":"Dissecting Oncogenic RTK Pathways in Colorectal Cancer Initiation and Progression","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Liver physiology and pathology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Cancer research; Receptor tyrosine kinase; Hepatocyte growth factor; Biology; Cancer; Neoplastic transformation; Angiogenesis; Tumor progression; Epithelial–mesenchymal transition; Metastasis; Signal transduction; Receptor; Cell biology; Carcinogenesis; Genetics","score_opus":0.04139194167308505,"score_gpt":0.4552326565154433,"score_spread":0.4138407148423583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790186604","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97944224,0.0008199807,0.018338984,0.00012534678,0.00032994684,0.00026358885,0.0000025255763,0.000019500238,0.000657886],"genre_scores_gemma":[0.85313785,0.000058329806,0.14624326,0.00034268,0.0001122372,0.00007342171,0.000016517,0.000010126224,0.000005561882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99831986,0.00087496254,0.00021539874,0.0003208041,0.000029679022,0.00023931047],"domain_scores_gemma":[0.9995485,0.00018396032,0.00006980049,0.0000997736,0.00005826285,0.00003970033],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080830295,0.000109448854,0.00028743903,0.0001604432,0.00003817789,0.0000020776233,0.000049877406,0.00029274798,0.000036712652],"category_scores_gemma":[0.00050260837,0.00009091271,0.000029891207,0.00021208287,0.00027975597,0.000019954,0.00007671369,0.00026314112,0.0000027408319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020224627,0.000042042826,0.18960443,0.000015063544,0.00001146782,0.000055603974,0.0004958097,5.701744e-7,0.785382,0.0007732817,9.703409e-7,0.023416534],"study_design_scores_gemma":[0.0012758076,0.0011558295,0.27463374,0.000082479215,0.000025364327,0.000090642854,0.00008851928,0.00038595824,0.71033186,0.011706174,0.00009009601,0.00013356163],"about_ca_topic_score_codex":0.000049359394,"about_ca_topic_score_gemma":0.00006822418,"teacher_disagreement_score":0.12790428,"about_ca_system_score_codex":0.00004398331,"about_ca_system_score_gemma":0.000056022713,"threshold_uncertainty_score":0.37073126},"labels":[],"label_agreement":null},{"id":"W2790248898","doi":"10.1007/978-1-4939-7652-2_2","title":"Overview of Protocols for Studying Extracellular RNA and Extracellular Vesicles","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute","keywords":"Extracellular vesicles; Computational biology; Extracellular; RNA; Extracellular vesicle; Biology; Microvesicles; microRNA; Cell biology; Genetics; Gene","score_opus":0.13086935985517958,"score_gpt":0.48469019948241066,"score_spread":0.3538208396272311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790248898","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013222071,0.7077225,0.2809674,0.0000059056397,0.00012952984,0.0108838035,0.00009658527,0.000015123305,0.0000469435],"genre_scores_gemma":[0.00000646952,0.6059792,0.3865723,0.000023466866,0.00016637062,0.006720079,0.00024166936,0.0001509245,0.00013951682],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99264836,0.0030140537,0.0017784381,0.0016279587,0.00016522389,0.0007659672],"domain_scores_gemma":[0.99664086,0.00034338684,0.0010664383,0.0015544094,0.00019827746,0.00019660803],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0039659855,0.00089601567,0.0023993787,0.00036079343,0.00008650413,0.000038347414,0.0010104703,0.0013492136,0.000019758943],"category_scores_gemma":[0.0012889663,0.00084307004,0.000898126,0.00037664257,0.00069626747,0.0000069693588,0.0007085043,0.0003962604,0.0000035227974],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000688834,0.00023077623,0.000029141363,0.014836385,0.00034658628,0.00002664014,0.000025953632,0.000001178351,0.403946,0.0017922164,0.000058373294,0.57863784],"study_design_scores_gemma":[0.00089712086,0.0008032139,0.0000018913357,0.0037104213,0.0005722394,0.00004562446,0.000019023739,0.000027524824,0.093343236,0.0026276242,0.89706475,0.00088730676],"about_ca_topic_score_codex":0.000006036865,"about_ca_topic_score_gemma":0.0000031209122,"teacher_disagreement_score":0.8970064,"about_ca_system_score_codex":0.00004993356,"about_ca_system_score_gemma":0.00034695587,"threshold_uncertainty_score":0.99994725},"labels":[],"label_agreement":null},{"id":"W2790291762","doi":"10.1007/978-1-4939-7780-2_10","title":"Experimental Determination of Checkpoint Adaptation by Mitotic Shake-Off and Microscopy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; University of Calgary; Alberta Children's Hospital","funders":"Alberta Innovates","keywords":"G2-M DNA damage checkpoint; Chromothripsis; Mitosis; Micronucleus test; Cell cycle checkpoint; Cell biology; Adaptation (eye); Spindle checkpoint; Biology; DNA damage; Cell cycle; Cell; Spindle apparatus; Cell division; Genome instability; Genetics; DNA; Chemistry; Neuroscience","score_opus":0.015586598245724533,"score_gpt":0.3740534392085623,"score_spread":0.35846684096283776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790291762","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45999297,0.0015766978,0.53804445,0.000016570477,0.00011136244,0.0001240425,0.0000053032963,0.0000051902516,0.00012342317],"genre_scores_gemma":[0.39529014,0.00003604147,0.6044166,0.00010702823,0.000027778786,0.000023687939,0.000042233427,0.000015443571,0.000041035208],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859464,0.0004939454,0.00027565478,0.00039192504,0.000048500584,0.00019532083],"domain_scores_gemma":[0.99951565,0.000022613032,0.00011478843,0.0002473207,0.00005833443,0.000041296313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054918614,0.00014288968,0.0001851226,0.00007432118,0.000025709038,0.000006333073,0.00012869349,0.00023130752,0.000015059965],"category_scores_gemma":[0.0001976348,0.00014792613,0.00005157622,0.00008364751,0.0002468482,0.0000029656549,0.00012608815,0.000059345544,0.0000014406975],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005148202,0.000052260933,0.00016274,0.000007250865,0.000011156961,0.0000010194001,0.000114642025,6.5682195e-7,0.97770053,0.00017358476,0.0000128934325,0.021711754],"study_design_scores_gemma":[0.00046422923,0.0009153715,0.000059191334,0.000009178221,0.0000086232085,0.000013926647,0.00011354067,0.0010333864,0.995015,0.00081767223,0.0014073323,0.0001425323],"about_ca_topic_score_codex":0.000020357207,"about_ca_topic_score_gemma":0.000007101512,"teacher_disagreement_score":0.06637217,"about_ca_system_score_codex":0.000017252218,"about_ca_system_score_gemma":0.000025338426,"threshold_uncertainty_score":0.60322523},"labels":[],"label_agreement":null},{"id":"W2790585426","doi":"10.1007/978-1-4939-7710-9_14","title":"A Protocol for Epigenetic Imprinting Analysis with RNA-Seq Data","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Syndromes and Imprinting","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Saskatchewan Research Council (Canada); National Research Council Canada","funders":"","keywords":"Genomic imprinting; Epigenetics; Biology; Imprinting (psychology); Arabidopsis; Genetics; Gene; Computational biology; Transcriptome; DNA methylation; Gene expression","score_opus":0.059478134429637106,"score_gpt":0.4539570101624232,"score_spread":0.39447887573278606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790585426","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027465746,0.000042490934,0.9523415,0.00006886257,0.000060573428,0.01945726,0.000015300315,0.000013254961,0.000535012],"genre_scores_gemma":[0.018602163,0.0000025461245,0.9521511,0.00023184127,0.00016545136,0.028588895,0.000119323515,0.00004313184,0.00009550593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740714,0.0004990632,0.00043405293,0.0010342919,0.00007430351,0.00055113435],"domain_scores_gemma":[0.9980673,0.0000580137,0.00019449557,0.0014471309,0.00015188757,0.000081182014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016503171,0.00025827994,0.00039191364,0.0002068786,0.00008422984,0.000029048595,0.0007829217,0.000246537,0.000036774712],"category_scores_gemma":[0.000559056,0.00021598031,0.00012809651,0.0005327618,0.00023976143,0.0000028767895,0.0006677042,0.00010796006,0.0000026536559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055413228,0.00004872564,0.014097147,0.000029026065,0.00036385338,0.0000016533417,0.000021636784,0.0000693853,0.9446118,0.00011489845,0.00002005269,0.040566433],"study_design_scores_gemma":[0.0021329317,0.0017974704,0.0063528516,0.000024486455,0.0002491202,0.00003126652,0.000060309194,0.005770297,0.9364708,0.0010231265,0.045503862,0.0005834871],"about_ca_topic_score_codex":0.0000631808,"about_ca_topic_score_gemma":0.0001132814,"teacher_disagreement_score":0.045483813,"about_ca_system_score_codex":0.000012199017,"about_ca_system_score_gemma":0.00009846793,"threshold_uncertainty_score":0.88074213},"labels":[],"label_agreement":null},{"id":"W2790721342","doi":"10.1007/978-1-4939-7780-2_14","title":"Study of Telomere Dysfunction in TP53 Mutant LoVo Cell Lines as a Model for Genomic Instability","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval; CancerCare Manitoba; Research Institute in Oncology and Hematology; University of Manitoba","funders":"","keywords":"Telomere; Genome instability; Biology; Chromosome instability; Genetics; DNA; DNA damage; Gene; Chromosome","score_opus":0.05196158824305166,"score_gpt":0.41299860682417927,"score_spread":0.36103701858112763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790721342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7184464,0.00021754326,0.27991867,0.000071324204,0.0001662126,0.0010059436,0.0000072191206,0.000017873632,0.0001488333],"genre_scores_gemma":[0.74166864,0.000021490787,0.2579104,0.00019736918,0.000044884946,0.000084857435,0.000008697473,0.000021828731,0.000041802316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99754655,0.00072049646,0.0006808021,0.0005962527,0.00009505372,0.0003608319],"domain_scores_gemma":[0.99881643,0.00023034259,0.00015427778,0.0005476351,0.00017736177,0.0000739816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016163455,0.00021913846,0.00067475904,0.00038421145,0.000033267366,0.000003624282,0.0001700457,0.0002480314,0.000023605671],"category_scores_gemma":[0.00085102697,0.00019097989,0.00009856932,0.00044039884,0.00023277647,0.000024821407,0.00009559447,0.00022515004,0.0000038485387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008375884,0.0010431643,0.038701396,0.000107557,0.00002865095,0.000022264152,0.0019981712,0.00014699137,0.94133866,0.00019265949,0.0000023617097,0.015580532],"study_design_scores_gemma":[0.009207952,0.0066579147,0.034493558,0.00007324137,0.0001494713,0.00004129667,0.002905057,0.047913898,0.88852227,0.00924356,0.00030265676,0.0004891533],"about_ca_topic_score_codex":0.00041758645,"about_ca_topic_score_gemma":0.00040405348,"teacher_disagreement_score":0.05281642,"about_ca_system_score_codex":0.00010731841,"about_ca_system_score_gemma":0.00017762255,"threshold_uncertainty_score":0.77879333},"labels":[],"label_agreement":null},{"id":"W2790744323","doi":"10.1007/978-1-4939-7765-9_22","title":"Identification of Novel Molecules Targeting Cancer Stem Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Identification (biology); Cancer stem cell; Computational biology; Stem cell; Cancer research; Biology; Cell biology","score_opus":0.04304133849062982,"score_gpt":0.4274312748627587,"score_spread":0.3843899363721289,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790744323","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09842827,0.001939845,0.89841634,0.00018354086,0.00045926787,0.000216198,0.000018872548,0.000013045113,0.00032462893],"genre_scores_gemma":[0.11300148,0.00021513388,0.8860311,0.00037748215,0.000108082815,0.00004408373,0.000007438676,0.000023875356,0.00019131406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998707,0.0002654997,0.0004375446,0.0003039829,0.000074148746,0.00021184943],"domain_scores_gemma":[0.999295,0.00005645784,0.00018209202,0.00026982508,0.00014850036,0.000048101374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010532927,0.00011173838,0.00033500287,0.0001531543,0.000019981282,0.0000035910225,0.0001013413,0.00011664395,0.00007379485],"category_scores_gemma":[0.00008567241,0.000099594115,0.000089997484,0.0002988414,0.00023733547,0.000012291019,0.000054581873,0.00011067287,0.0000033108622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047930833,0.000072616225,0.0005407291,0.000055762728,0.00004211494,0.0000032389964,0.00011659833,0.00002145072,0.9497888,0.0007810215,0.000035300134,0.048494454],"study_design_scores_gemma":[0.00062099594,0.00011821077,0.00014860186,0.00003408045,0.00006080777,0.000003808759,0.00006826005,0.0006874559,0.99311167,0.00021432048,0.004844049,0.00008774662],"about_ca_topic_score_codex":0.00018978691,"about_ca_topic_score_gemma":0.000013766203,"teacher_disagreement_score":0.04840671,"about_ca_system_score_codex":0.00004989735,"about_ca_system_score_gemma":0.00007410754,"threshold_uncertainty_score":0.40613303},"labels":[],"label_agreement":null},{"id":"W2790875157","doi":"10.1007/978-1-4939-7710-9_2","title":"Microarray Data Analysis for Transcriptome Profiling","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre","funders":"Shenzhen Peacock Plan","keywords":"Microarray analysis techniques; Transcriptome; Profiling (computer programming); Gene chip analysis; Microarray; Microarray databases; Preprocessor; Gene expression profiling; Computational biology; Computer science; Data mining; Biology; Gene expression; Gene; Genetics; Artificial intelligence","score_opus":0.0698222306967407,"score_gpt":0.4478951205830001,"score_spread":0.37807288988625937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790875157","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026706995,0.0008501236,0.9712473,0.0001971407,0.00026316158,0.00027606255,0.000060636838,0.000011108404,0.00038744064],"genre_scores_gemma":[0.1258543,0.000047391066,0.8720307,0.0005681701,0.00017589817,0.000099923476,0.0010167488,0.000020624355,0.00018624084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814063,0.00047716685,0.0002825314,0.0007799371,0.00004352528,0.0002762221],"domain_scores_gemma":[0.99865764,0.000024893277,0.00008544201,0.00108563,0.00009463706,0.000051757725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001205477,0.00014387385,0.00023034362,0.00021551677,0.000053453245,0.000012814273,0.0005839337,0.00023865452,0.000022700822],"category_scores_gemma":[0.00028307133,0.00013465487,0.00012017398,0.00046588996,0.00015270276,0.0000025956738,0.00013343712,0.000072121984,0.000001957197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077491844,0.000029619006,0.002656781,0.000007487756,0.00015591616,3.0650983e-7,0.000022915097,0.0000131272645,0.9881487,0.00051731884,0.00016634683,0.008203975],"study_design_scores_gemma":[0.0004121199,0.0001682661,0.00042431598,0.0000027434855,0.00009175705,0.0000015145774,0.00004154775,0.000858772,0.9161236,0.00088995305,0.08082,0.00016535209],"about_ca_topic_score_codex":0.000008887636,"about_ca_topic_score_gemma":0.000026390968,"teacher_disagreement_score":0.099216625,"about_ca_system_score_codex":0.000011530181,"about_ca_system_score_gemma":0.00006147832,"threshold_uncertainty_score":0.54910666},"labels":[],"label_agreement":null},{"id":"W2790975806","doi":"10.1007/978-1-4939-7765-9_7","title":"Methods for Assessing Apoptosis and Anoikis in Normal Intestine/Colon and Colorectal Cancer","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell death mechanisms and regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Anoikis; Apoptosis; Programmed cell death; Biology; Colorectal cancer; Cancer research; Metastasis; Cancer; Intestinal epithelium; Cell biology; Immunology; Epithelium; Genetics","score_opus":0.02072651080506898,"score_gpt":0.4322990078154469,"score_spread":0.4115724970103779,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2790975806","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4378553,0.001134469,0.560499,0.000079260564,0.00015329455,0.00020034931,0.000003107634,0.000004425365,0.00007076242],"genre_scores_gemma":[0.15471518,0.00020773846,0.8445913,0.00019912257,0.00009291042,0.00011935052,0.000026815285,0.000020183345,0.000027369339],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982446,0.00069975766,0.0002550847,0.0004838821,0.000025830941,0.00029087864],"domain_scores_gemma":[0.9995396,0.000120794255,0.000084940344,0.00013329035,0.000069195325,0.000052168234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014429922,0.00016893167,0.0002544331,0.0001349425,0.000060781087,0.000021856498,0.000086604225,0.0003240237,0.0000068384948],"category_scores_gemma":[0.0004359184,0.00015770415,0.000042144642,0.00014880244,0.00021856467,0.0000052564155,0.0001620037,0.0000986672,1.0440528e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066572866,0.00001644028,0.003388357,0.000015940028,0.00001359819,6.2335096e-7,0.00004452916,0.000006529055,0.78151107,0.00031542496,0.0000033523575,0.21461755],"study_design_scores_gemma":[0.00073946005,0.00046906408,0.0037856773,0.000021031894,0.000019779754,0.000017915732,0.000043598873,0.005003564,0.9828084,0.0036985348,0.0031826238,0.00021035403],"about_ca_topic_score_codex":0.00010631552,"about_ca_topic_score_gemma":0.00008031208,"teacher_disagreement_score":0.2840923,"about_ca_system_score_codex":0.000020475705,"about_ca_system_score_gemma":0.00004354365,"threshold_uncertainty_score":0.6430989},"labels":[],"label_agreement":null},{"id":"W2791135732","doi":"10.1007/978-1-4939-7710-9_13","title":"Predicting Gene Expression Noise from Gene Expression Variations","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre","funders":"","keywords":"Gene expression; Gene; Noise (video); Expression (computer science); Biology; Computational biology; Regulation of gene expression; Genetics; Computer science; Artificial intelligence","score_opus":0.01539258045129562,"score_gpt":0.34034483800372173,"score_spread":0.3249522575524261,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791135732","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40215454,0.0010299542,0.59617156,0.0000357577,0.00027131473,0.00013234298,0.000020061141,0.000021336871,0.00016314593],"genre_scores_gemma":[0.31057292,0.00006839544,0.6880409,0.00021650326,0.00060940016,0.000054740263,0.0003350127,0.000040685063,0.00006145078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960824,0.0018253259,0.00051476154,0.0009665144,0.00012637129,0.00048459996],"domain_scores_gemma":[0.9984087,0.00008176206,0.00022527551,0.001010125,0.00013930394,0.00013483276],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010234991,0.00030532893,0.00037256491,0.00017010525,0.00015843254,0.000020802441,0.00045400806,0.00062524475,0.0001065486],"category_scores_gemma":[0.000499141,0.0002916848,0.0001887447,0.00032209212,0.00020329552,0.0000051437146,0.000493148,0.00020371724,0.000013701788],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056568213,0.000056481378,0.021063656,0.0000027269004,0.000071075236,0.0000059935014,0.00007517873,0.0003998188,0.9754952,0.00002755227,0.00009352207,0.0026522218],"study_design_scores_gemma":[0.00052604766,0.00016221248,0.0020612567,0.00001910611,0.000052272655,0.0000072063563,0.000025209845,0.0017331201,0.990976,0.0017198254,0.0024159155,0.00030186633],"about_ca_topic_score_codex":0.000059142312,"about_ca_topic_score_gemma":0.000026624064,"teacher_disagreement_score":0.091869354,"about_ca_system_score_codex":0.000035377005,"about_ca_system_score_gemma":0.000072182534,"threshold_uncertainty_score":0.9999535},"labels":[],"label_agreement":null},{"id":"W2791173205","doi":"10.1007/978-1-4939-7652-2_1","title":"Extracellular RNAs: A New Awareness of Old Perspectives","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":92,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Cancer Institute","keywords":"Extracellular vesicles; Compartmentalization (fire protection); Biogenesis; Biomarker; Cancer biomarkers; Computational biology; Extracellular vesicle; Microvesicles; RNA; Biomarker discovery; Liquid biopsy; Biology; Cancer; Proteomics; microRNA; Cell biology; Biochemistry; Gene; Genetics","score_opus":0.04842982987489415,"score_gpt":0.4484691963376379,"score_spread":0.40003936646274374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791173205","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006638272,0.63668036,0.36217132,0.000007475268,0.00027079956,0.000542357,0.000043610085,0.000015131556,0.0002025294],"genre_scores_gemma":[0.0000061675905,0.6726315,0.32541764,0.00002054573,0.00030905587,0.00008382454,0.0002529929,0.00012597755,0.0011522679],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99284005,0.0034004988,0.0012948819,0.0016126303,0.00016285681,0.0006890879],"domain_scores_gemma":[0.9967391,0.00016169543,0.0007811111,0.0019134717,0.00016466492,0.0002399705],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017742878,0.0008338742,0.002120513,0.00044425885,0.00004766753,0.000019535995,0.0013626945,0.0015652293,0.000092272625],"category_scores_gemma":[0.0015186238,0.00078479847,0.0011367741,0.0005696471,0.0006867322,0.0000037875632,0.00069369696,0.0004976433,0.000019490815],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080949714,0.00042666032,0.000091216614,0.004796386,0.0008587448,0.00012539989,0.00016798778,0.000006603258,0.22817107,0.005631539,0.00047302237,0.7591704],"study_design_scores_gemma":[0.00048765523,0.00038428715,0.0000018871316,0.0015021145,0.0004947009,0.00007228877,0.00007046454,0.0000074888076,0.03934964,0.001993607,0.954771,0.0008649093],"about_ca_topic_score_codex":0.000054333785,"about_ca_topic_score_gemma":0.000011887098,"teacher_disagreement_score":0.95429796,"about_ca_system_score_codex":0.00008229639,"about_ca_system_score_gemma":0.0009861728,"threshold_uncertainty_score":0.99973094},"labels":[],"label_agreement":null},{"id":"W2791257633","doi":"10.1007/978-1-4939-7649-2_19","title":"Purification of Exosomes from Primary Schwann Cells, RNA Extraction, and Next-Generation Sequencing of Exosomal RNAs","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Microvesicles; RNA; Biology; microRNA; Cell biology; Exosome; Schwann cell; RNA extraction; Cell; Long non-coding RNA; Gene; Genetics","score_opus":0.04396295874249389,"score_gpt":0.3506070419845905,"score_spread":0.3066440832420966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791257633","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5884172,0.003209103,0.40781358,0.00002890195,0.00015584883,0.00013400946,0.000019077044,0.0000054230068,0.00021688222],"genre_scores_gemma":[0.5272989,0.00018337595,0.47212455,0.00007992471,0.00013481383,0.000013392306,0.00012677748,0.000017718614,0.000020520944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99791604,0.00078150857,0.00051168515,0.00050168106,0.00008864586,0.00020044234],"domain_scores_gemma":[0.99890065,0.000057605404,0.00030270274,0.0005126529,0.0001637884,0.00006258706],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007038704,0.00017562333,0.00027616738,0.000124595,0.000039076644,0.000010035641,0.00021027573,0.00031097906,0.000021449387],"category_scores_gemma":[0.00032712342,0.0001854554,0.0000787252,0.00015012288,0.00044381118,0.0000111570025,0.00012738713,0.000111193825,0.0000012643251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007079941,0.00006154142,0.0011608683,0.000027963722,0.000044174485,0.0000035650462,0.00009435909,0.000021227983,0.9834875,0.0004519189,0.000015660791,0.014560431],"study_design_scores_gemma":[0.00038295588,0.00023303025,0.0013894812,0.000017091363,0.00003313334,0.0000053774147,0.00006281563,0.0004881139,0.9951124,0.0013941482,0.0007142444,0.00016719548],"about_ca_topic_score_codex":0.000082287064,"about_ca_topic_score_gemma":0.000012336835,"teacher_disagreement_score":0.06431098,"about_ca_system_score_codex":0.000030213472,"about_ca_system_score_gemma":0.00011992069,"threshold_uncertainty_score":0.75626516},"labels":[],"label_agreement":null},{"id":"W2791345004","doi":"10.1007/978-1-4939-7601-0_3","title":"Isolation of Viral-Infected Brain Regions for miRNA Profiling from Formalin-Fixed Paraffin-Embedded Tissues by Laser Capture Microdissection","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Laser capture microdissection; Microdissection; Biology; microRNA; Brain tissue; RNA; Isolation (microbiology); Virology; Computational biology; Gene; Bioinformatics; Genetics; Gene expression; Anatomy","score_opus":0.013490714472819614,"score_gpt":0.3782780873663566,"score_spread":0.36478737289353697,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791345004","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16261277,0.0005808931,0.8352495,0.0003775617,0.00011444011,0.00073725986,0.00013509727,0.000036571895,0.00015592053],"genre_scores_gemma":[0.22810325,0.00004637963,0.76838946,0.00058419636,0.0001083563,0.00032498277,0.0022920347,0.00003842515,0.00011292533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978319,0.00060923264,0.000503067,0.0006548224,0.000049384278,0.00035159066],"domain_scores_gemma":[0.99881023,0.000095362884,0.00027633636,0.0005573485,0.0002016602,0.00005908214],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006167758,0.00026202828,0.00034829986,0.00011691848,0.00009275297,0.0000105417,0.00028016896,0.00069954374,0.000013366122],"category_scores_gemma":[0.0004059539,0.0002583577,0.00017033958,0.00021303393,0.00027847214,0.0000052394257,0.00011212633,0.00015725053,0.0000016996048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014893676,0.00008325544,0.00060934527,0.000011391881,0.00006616349,5.3185687e-7,0.000040051254,0.000006734541,0.9919836,0.004777709,0.0010925799,0.0011797339],"study_design_scores_gemma":[0.0006426266,0.0005514204,0.00006731154,0.00001404279,0.000034200464,0.0000058677842,0.0000321194,0.00048889266,0.9701073,0.014270505,0.013518924,0.0002667691],"about_ca_topic_score_codex":0.00015717364,"about_ca_topic_score_gemma":0.000078449215,"teacher_disagreement_score":0.06686004,"about_ca_system_score_codex":0.000020922203,"about_ca_system_score_gemma":0.000050135786,"threshold_uncertainty_score":0.9999869},"labels":[],"label_agreement":null},{"id":"W2791464651","doi":"10.1007/978-1-4939-7649-2_21","title":"Teased Fiber Preparation of Myelinated Nerve Fibers from Peripheral Nerves for Vital Dye Staining and Immunofluorescence Analysis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Immunolabeling; Immunofluorescence; Staining; Stain; Cell biology; Pathology; Biology; Schwann cell; Anatomy; Chemistry; Immunohistochemistry; Medicine; Immunology; Antibody","score_opus":0.02781469599289913,"score_gpt":0.41435877570705887,"score_spread":0.3865440797141597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791464651","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5586938,0.0001232752,0.440807,0.000043591397,0.00008582624,0.00015867186,0.000031229003,0.000011581572,0.000044983164],"genre_scores_gemma":[0.6300133,0.000005173536,0.36972687,0.000077397264,0.000034357952,0.000030674444,0.000041730003,0.000008125582,0.00006239253],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997534,0.0013701792,0.0003556411,0.0004759325,0.00006391679,0.0002003723],"domain_scores_gemma":[0.99907845,0.0003950403,0.00017033241,0.00024136901,0.0000815799,0.000033243923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067924306,0.00013398264,0.00029416676,0.00018855726,0.00009179139,0.000021957205,0.00014912861,0.00015238921,0.00004872991],"category_scores_gemma":[0.0008226698,0.00011742168,0.00011012947,0.0004891539,0.00036278434,0.00007668506,0.00006134139,0.00008397816,6.11413e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022301686,0.00002747849,0.0007177746,0.0000060154766,0.00004776408,0.0000023072012,0.00035391035,0.0003000147,0.98908776,0.00075303245,0.00000399703,0.008476914],"study_design_scores_gemma":[0.00040231735,0.00044537408,0.00055336405,0.000007700807,0.00008102012,0.0000012045477,0.00004010353,0.023390949,0.97211295,0.0027225695,0.00011380579,0.00012860815],"about_ca_topic_score_codex":0.00015149762,"about_ca_topic_score_gemma":0.000029159708,"teacher_disagreement_score":0.07131946,"about_ca_system_score_codex":0.00002463088,"about_ca_system_score_gemma":0.00003128338,"threshold_uncertainty_score":0.4788317},"labels":[],"label_agreement":null},{"id":"W2791615058","doi":"10.1007/978-1-4939-7680-5_6","title":"X-Ray Fluorescence-Detected Flow Cytometry","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Flow cytometry; Fluorescence; TRACE (psycholinguistics); Characterization (materials science); Cytometry; Synchrotron; X-ray fluorescence; Chemistry; Biophysics; Nanotechnology; Analytical Chemistry (journal); Biology; Materials science; Molecular biology; Chromatography; Physics; Optics","score_opus":0.02741007520832826,"score_gpt":0.39090744390976695,"score_spread":0.3634973687014387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791615058","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06387484,0.00028116882,0.9308475,0.000344819,0.0010961212,0.00025874857,0.0000037720881,0.00011245082,0.0031805553],"genre_scores_gemma":[0.046870187,0.000039629293,0.9503052,0.002101191,0.00031046217,0.00002756488,0.000028820647,0.00002690325,0.00029001167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99765015,0.0010932818,0.00031704165,0.00047186267,0.000071576906,0.00039609373],"domain_scores_gemma":[0.99903375,0.00018205529,0.00006574651,0.00047259373,0.00013316622,0.00011267536],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007341398,0.00018447639,0.00043951249,0.0004039474,0.000047823967,0.000004297161,0.00013214492,0.00038016067,0.0007176399],"category_scores_gemma":[0.0011565044,0.00015449485,0.00011505259,0.0007262794,0.00041660952,0.00001486592,0.000085675805,0.00035660015,0.00016773875],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024112537,0.00006366234,0.002876332,0.000015709764,0.000034619963,0.000060567392,0.00006480331,0.000001971801,0.942583,0.00031439486,0.00012468657,0.053619128],"study_design_scores_gemma":[0.002884175,0.0032531915,0.02841999,0.00006249685,0.00007248343,0.00020281547,0.00007678209,0.004223827,0.92311114,0.0046457504,0.03262077,0.0004265756],"about_ca_topic_score_codex":0.000017599807,"about_ca_topic_score_gemma":0.000004147425,"teacher_disagreement_score":0.053192552,"about_ca_system_score_codex":0.000051089566,"about_ca_system_score_gemma":0.00007224241,"threshold_uncertainty_score":0.7857654},"labels":[],"label_agreement":null},{"id":"W2791852280","doi":"10.1007/978-1-4939-7649-2_16","title":"In Vitro Analysis of the Role of Schwann Cells on Axonal Degeneration and Regeneration Using Sensory Neurons from Dorsal Root Ganglia","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Dorsal root ganglion; Axotomy; Regeneration (biology); Neuroscience; Axon; Soma; Biology; Sensory system; Peripheral nervous system; Schwann cell; Sensory neuron; Degeneration (medical); Axoplasmic transport; Anatomy; Central nervous system; Cell biology; Pathology; Medicine","score_opus":0.03455591209065428,"score_gpt":0.36360809632564256,"score_spread":0.3290521842349883,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791852280","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86826867,0.00009188805,0.13110003,0.0000762056,0.00025928952,0.00011909515,0.000040681327,0.0000035243388,0.000040604205],"genre_scores_gemma":[0.914989,0.0000035644102,0.08469533,0.00023342235,0.00004897002,0.000004343413,0.0000084086805,0.000007558606,0.000009388126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962667,0.0027944855,0.00034796642,0.00036066258,0.00009608229,0.00013405847],"domain_scores_gemma":[0.9992752,0.00021381935,0.00018448872,0.00026749156,0.00004183162,0.000017182176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053321116,0.0001096349,0.0002496454,0.00032381483,0.00006006299,0.000008069233,0.00012582671,0.00013631776,0.0000101121295],"category_scores_gemma":[0.0003224918,0.00008520067,0.00007618703,0.00070266164,0.00031770658,0.00004289642,0.00006171568,0.00012562763,3.274952e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007665443,0.000042114145,0.00085546507,0.000001586136,0.000013414849,0.0000019222791,0.00009758658,0.006331748,0.9891397,0.0020164263,5.3688353e-7,0.0014228473],"study_design_scores_gemma":[0.00014703453,0.000074362455,0.0005516032,0.000004416204,0.000057781195,7.633725e-7,0.000008986498,0.08854608,0.90815806,0.0023585302,0.000022856186,0.00006949507],"about_ca_topic_score_codex":0.0001750091,"about_ca_topic_score_gemma":0.00015207354,"teacher_disagreement_score":0.08221434,"about_ca_system_score_codex":0.000023587556,"about_ca_system_score_gemma":0.000031303513,"threshold_uncertainty_score":0.34743825},"labels":[],"label_agreement":null},{"id":"W2791920211","doi":"10.1007/7651_2017_75","title":"Identifying Clinically Relevant Proteins for Targeted Analysis in the Development of a Multiplexed Proteomic Biomarker Assay","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Biomarker discovery; Biomarker; Proteomics; Computational biology; Ranking (information retrieval); Bioinformatics; Medicine; Biology; Computer science; Machine learning; Genetics; Gene","score_opus":0.07208361551455189,"score_gpt":0.47084627276795654,"score_spread":0.39876265725340465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2791920211","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13230886,0.000037220565,0.86631304,0.00016129331,0.0000111648205,0.00097144896,0.000016202344,0.000017095233,0.00016366818],"genre_scores_gemma":[0.183925,0.0000073229576,0.81350756,0.000025323248,0.0000065493505,0.002458157,0.000038074955,0.00001373909,0.00001829629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980452,0.0003597845,0.0008415303,0.0004254258,0.00006805174,0.0002600155],"domain_scores_gemma":[0.9980363,0.0003656104,0.0005875512,0.0009186475,0.00006759517,0.000024243987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042692376,0.00015115217,0.00040801876,0.00015542292,0.00014687963,0.000021821103,0.00081714836,0.00024412207,0.000013605069],"category_scores_gemma":[0.0022181664,0.000117040516,0.00018570872,0.00021577315,0.00015544693,0.000024223067,0.00018511878,0.00023857236,4.1203208e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060279155,0.000084685875,0.007881889,0.000043605636,0.00010346781,0.000001472927,0.00017907172,0.000015345693,0.9720015,0.0007764854,5.3371497e-7,0.018851643],"study_design_scores_gemma":[0.0004900948,0.00001779042,0.0035127394,0.00003151616,0.00005093246,6.976029e-7,0.000042324733,0.0023817362,0.9697599,0.02316965,0.00038571426,0.00015693314],"about_ca_topic_score_codex":0.00005664427,"about_ca_topic_score_gemma":0.00008417776,"teacher_disagreement_score":0.052805513,"about_ca_system_score_codex":0.000050478833,"about_ca_system_score_gemma":0.00007006652,"threshold_uncertainty_score":0.47727737},"labels":[],"label_agreement":null},{"id":"W2792753177","doi":"10.1007/978-1-4939-7714-7_3","title":"In Vivo Evaluation of the Cardiovascular System of Mouse Embryo and Fetus Using High Frequency Ultrasound","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Ted Rogers Centre for Heart Research; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Fetus; Embryo; Ultrasound; In vivo; High frequency ultrasound; Biology; Andrology; Medicine; Cell biology; Pregnancy; Radiology; Genetics","score_opus":0.03500214798742576,"score_gpt":0.39865957263847696,"score_spread":0.3636574246510512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2792753177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95625687,0.003439337,0.039416555,0.000007609895,0.0001422843,0.00046208076,0.000020154683,0.0000022340757,0.00025285245],"genre_scores_gemma":[0.9325828,0.000034410354,0.06727233,0.00001423872,0.00003837159,0.000022595554,0.000004066518,0.000016487758,0.000014738126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954585,0.0033747442,0.00034831543,0.0003688736,0.00020859002,0.00024100751],"domain_scores_gemma":[0.9988722,0.00007744986,0.00008869947,0.0006437002,0.00028577042,0.00003217606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003860025,0.0001311778,0.00032689353,0.00014011306,0.000030348836,0.000004072087,0.00021781065,0.00024403694,0.000011250172],"category_scores_gemma":[0.0010582884,0.00010775074,0.00013624728,0.00032520163,0.00041166018,0.0000030480746,0.00019670844,0.00011655421,3.8458384e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002374785,0.000021747608,0.0056067226,0.00006943112,0.00009518964,0.0000017295392,0.00003490226,0.00010934469,0.99208003,0.00024848105,0.0000011291874,0.0017075517],"study_design_scores_gemma":[0.0006238366,0.00015352832,0.0018827494,0.000028110713,0.000057981415,0.000040193387,0.00005851264,0.0006570153,0.99578387,0.00054431125,0.000065550215,0.00010434571],"about_ca_topic_score_codex":0.0008301832,"about_ca_topic_score_gemma":0.00014430218,"teacher_disagreement_score":0.02785577,"about_ca_system_score_codex":0.00006074862,"about_ca_system_score_gemma":0.00015132465,"threshold_uncertainty_score":0.43939477},"labels":[],"label_agreement":null},{"id":"W2793295717","doi":"10.1007/978-1-0716-5126-1_6","title":"Explant Culture for Studying Lung Development","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Explant culture; Lung; Biology; Cell biology; Ex vivo; In vivo; Function (biology); Immunology; Computational biology; In vitro; Medicine; Genetics; Internal medicine","score_opus":0.13439653093635787,"score_gpt":0.5560119985214265,"score_spread":0.4216154675850686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793295717","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038044523,0.0031668562,0.9565028,0.00025767682,0.00021813765,0.0010813958,0.000003000125,0.000028581537,0.0006970512],"genre_scores_gemma":[0.0052560265,0.000033824435,0.9922082,0.0018221305,0.000114662806,0.00029908045,0.000016499796,0.000022213739,0.00022736404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981812,0.00054706,0.00031577362,0.00036938398,0.00011181353,0.00047473845],"domain_scores_gemma":[0.9991787,0.00022331478,0.000047399153,0.0002574421,0.0001566278,0.00013652159],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002380432,0.00012658905,0.0003062109,0.00018905838,0.000081217,0.0000050742747,0.00013873493,0.00018182133,0.000042429696],"category_scores_gemma":[0.0012679354,0.00009953526,0.000046323676,0.00022069691,0.000119591634,0.000012045838,0.000111393354,0.0002408937,0.0000129464825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034013993,0.000064809945,0.0036153935,0.0002505578,0.000044833392,0.000059975362,0.00059644016,2.3515533e-7,0.6988975,0.0011264958,0.00010616247,0.29489747],"study_design_scores_gemma":[0.0016575517,0.00088003953,0.0013357004,0.0000808176,0.000013132244,0.00003202584,0.00012226967,0.00023158835,0.58432454,0.00090486713,0.4102618,0.00015562984],"about_ca_topic_score_codex":0.0000072011094,"about_ca_topic_score_gemma":0.0000082729075,"teacher_disagreement_score":0.41015565,"about_ca_system_score_codex":0.00015486906,"about_ca_system_score_gemma":0.00029215773,"threshold_uncertainty_score":0.405893},"labels":[],"label_agreement":null},{"id":"W2793475384","doi":"10.1007/978-1-4939-7714-7_2","title":"Visualizing the Vascular Network in the Mouse Embryo and Yolk Sac","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Yolk sac; Immunofluorescence; Embryo; Cell biology; Antibody; Embryonic stem cell; Endothelial stem cell; Biology; Cell adhesion molecule; Yolk; Primary and secondary antibodies; Molecular biology; Immunology; Biochemistry; In vitro; Gene","score_opus":0.02360323380956171,"score_gpt":0.3921966149802371,"score_spread":0.3685933811706754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793475384","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5064921,0.015948676,0.47549194,0.00051664625,0.00024259149,0.00038617733,0.0000051015127,0.000009400477,0.00090735045],"genre_scores_gemma":[0.6448521,0.003128193,0.33608228,0.013690797,0.0015771809,0.0003052669,0.000073868105,0.00009414933,0.00019616837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690145,0.0019085734,0.00026722948,0.00044305576,0.00007131328,0.00040837695],"domain_scores_gemma":[0.99919987,0.000096601056,0.000071707254,0.0005588867,0.0000409567,0.000032010572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028363366,0.00018713217,0.00021134036,0.0000466489,0.00011974917,0.000024186842,0.0004173367,0.00024996075,0.000015568903],"category_scores_gemma":[0.00020490844,0.00011449177,0.00011065229,0.00025989028,0.00040974477,0.0000019327515,0.0002263492,0.0001584106,0.0000031717136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004179722,0.000031053438,0.008346784,0.000006997763,0.00005993284,0.000005809416,0.00018666864,0.00006436384,0.97361046,0.0031919822,0.00049663807,0.013957517],"study_design_scores_gemma":[0.0015490464,0.0009826474,0.014004953,0.00003694778,0.000085723856,0.00007496203,0.00076591386,0.0007852856,0.55851454,0.009033336,0.41332248,0.00084419345],"about_ca_topic_score_codex":0.00007981088,"about_ca_topic_score_gemma":0.0001061243,"teacher_disagreement_score":0.41509593,"about_ca_system_score_codex":0.000011975501,"about_ca_system_score_gemma":0.00003451885,"threshold_uncertainty_score":0.4668839},"labels":[],"label_agreement":null},{"id":"W2793541733","doi":"10.1007/978-1-4939-7474-0_13","title":"Single-Particle Tracking of Cell Surface Proteins","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Cell; Cell biology; Cell membrane; Cell surface receptor; Actin cytoskeleton; Cytoskeleton; Actin; Membrane protein; Membrane; Receptor; Chemistry; Biophysics; Biology; Biochemistry","score_opus":0.15372802128824015,"score_gpt":0.5019119451904135,"score_spread":0.34818392390217334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793541733","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00037691754,0.8147169,0.18214342,0.00001912042,0.00009474641,0.0014377483,0.000008014234,0.000023108416,0.0011800576],"genre_scores_gemma":[0.0000075325943,0.4636341,0.5359067,0.000026134188,0.000031091957,0.00004049724,0.000024685967,0.00006164628,0.0002676304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99343616,0.0039907256,0.0010332685,0.00073005643,0.00022068385,0.0005890885],"domain_scores_gemma":[0.9977825,0.0005960827,0.0003686883,0.000921589,0.00017773705,0.00015335153],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026099475,0.0003888507,0.002223495,0.0003034154,0.000023236138,0.000009798523,0.00040085003,0.0007305556,0.00014895659],"category_scores_gemma":[0.0014909052,0.00031398513,0.0005545089,0.000876749,0.0003868562,0.000012607979,0.00030979633,0.00073437183,0.00004436127],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021004802,0.00022655432,0.000019291423,0.006718785,0.00005427099,0.00010962359,0.000022715334,3.1004035e-7,0.63121873,0.000057198944,0.000009052776,0.36154246],"study_design_scores_gemma":[0.00040207416,0.0007573928,0.0000015826977,0.0027047934,0.00023698715,0.00006246014,0.000008078694,0.000027589575,0.5853664,0.0001514056,0.41004518,0.00023602511],"about_ca_topic_score_codex":0.000023339015,"about_ca_topic_score_gemma":0.0000023594598,"teacher_disagreement_score":0.41003612,"about_ca_system_score_codex":0.00016063711,"about_ca_system_score_gemma":0.00036778566,"threshold_uncertainty_score":0.9999312},"labels":[],"label_agreement":null},{"id":"W2793604743","doi":"10.1007/978-1-4939-7720-8_12","title":"Analysis of Feedback Signaling from Horizontal Cells to Photoreceptors in Mice","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Eye Institute; Canadian Institutes of Health Research; U.S. Department of Veterans Affairs","keywords":"Depolarization; Inhibitory postsynaptic potential; Cell biology; Biology; Hyperpolarization (physics); Retina; Neuroscience; Calcium imaging; Biophysics; Calcium; Chemistry","score_opus":0.011107574870062864,"score_gpt":0.3419140097838975,"score_spread":0.33080643491383466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793604743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7408098,0.00020835391,0.2581371,0.000023854978,0.0001610737,0.00012571529,0.000014407312,0.0000033572242,0.0005163584],"genre_scores_gemma":[0.603558,0.000024805095,0.3959782,0.00023707897,0.000028698822,0.000016062944,0.00011819427,0.000013232373,0.000025732355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981635,0.0005562657,0.00040439298,0.0005156741,0.00006737629,0.00029274545],"domain_scores_gemma":[0.999469,0.00005981046,0.00009546538,0.0002488084,0.00006388743,0.0000630174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068396603,0.00017565898,0.00039046077,0.000417187,0.000017267139,0.0000062697864,0.0002875157,0.00024640243,0.000099913814],"category_scores_gemma":[0.00021102565,0.00017719183,0.00014318983,0.0009044409,0.00013356814,0.0000017598456,0.00015817759,0.00008688088,0.0000069401876],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001532543,0.000043810865,0.03450194,0.0000028725394,0.00018846816,0.0000024865308,0.0001763906,0.00009747332,0.9614121,0.000026825044,0.000023837269,0.0033705968],"study_design_scores_gemma":[0.00033948955,0.00029162446,0.0051162452,0.000008869731,0.000058945072,2.3220502e-7,0.0001448967,0.00012278784,0.9915428,0.00025787213,0.0019064482,0.00020977404],"about_ca_topic_score_codex":0.0005064567,"about_ca_topic_score_gemma":0.000479996,"teacher_disagreement_score":0.13784112,"about_ca_system_score_codex":0.000022244818,"about_ca_system_score_gemma":0.000046634585,"threshold_uncertainty_score":0.7225673},"labels":[],"label_agreement":null},{"id":"W2793664554","doi":"10.1007/978-1-4939-7592-1_14","title":"Chemical Isotope Labeling LC-MS for Human Blood Metabolome Analysis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Metabolome; Metabolomics; Metabolite; Chromatography; Human blood; Mass spectrometry; Whole blood; Chemistry; Liquid chromatography–mass spectrometry; Isotope; Biology; Biochemistry; Physiology","score_opus":0.02154775908912242,"score_gpt":0.39775585589442153,"score_spread":0.3762080968052991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793664554","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36458412,0.0025401288,0.631439,0.00010808188,0.00018855475,0.0002843817,0.000032233922,0.000016390382,0.0008071091],"genre_scores_gemma":[0.21066274,0.00016487343,0.78768146,0.0005257334,0.00035060072,0.00016037865,0.00020228408,0.00003897016,0.00021294308],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99744403,0.0004843513,0.00051120465,0.0008852011,0.00007564089,0.00059955945],"domain_scores_gemma":[0.99885446,0.00007269211,0.00016302524,0.00063808967,0.00018387949,0.00008785473],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015961617,0.00030848404,0.0007231237,0.0003684354,0.0001226824,0.000020474947,0.00043056987,0.00037658503,0.000058113517],"category_scores_gemma":[0.0007718345,0.0002868598,0.0004002874,0.0007511883,0.0003195355,0.000002421151,0.00033135404,0.00015671643,0.0000028335792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048520196,0.00009542677,0.0028154494,0.000009844328,0.0013313455,0.000002198156,0.000023754877,0.000005402435,0.98501354,0.009047743,0.000039860635,0.0015668807],"study_design_scores_gemma":[0.0009270223,0.0004008293,0.00029025442,0.000002666683,0.0006868579,0.0000049286978,0.00002058699,0.00007288317,0.9670464,0.0064131273,0.023786131,0.00034833295],"about_ca_topic_score_codex":0.00004744308,"about_ca_topic_score_gemma":0.00006092753,"teacher_disagreement_score":0.15624249,"about_ca_system_score_codex":0.000013682547,"about_ca_system_score_gemma":0.000032161643,"threshold_uncertainty_score":0.99995834},"labels":[],"label_agreement":null},{"id":"W2793757987","doi":"10.1007/978-1-4939-7717-8_3","title":"Capture Hybridization of Long-Range DNA Fragments for High-Throughput Sequencing","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Royal Ontario Museum","funders":"Division of Chemistry; National Natural Science Foundation of China; Oxford Nanopore Technologies","keywords":"DNA sequencing; Biology; DNA; Computational biology; Genetics","score_opus":0.023960844822392816,"score_gpt":0.35759488460789657,"score_spread":0.33363403978550377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793757987","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4353425,0.0009732407,0.56296444,0.000042455893,0.00025106,0.00022784919,0.000028897179,0.0000020839605,0.00016746248],"genre_scores_gemma":[0.5734322,0.00007630134,0.42596114,0.00025193646,0.00012305178,0.000045512694,0.000052373063,0.00002031618,0.00003718371],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986246,0.0002971318,0.00031762142,0.0004328704,0.000045833553,0.00028190803],"domain_scores_gemma":[0.9992703,0.000042290576,0.00014048473,0.00034305532,0.00017037729,0.00003344883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059379806,0.0001733975,0.00027823026,0.00007161831,0.000050420243,0.0000048096126,0.00020170028,0.00022838374,0.0000073570063],"category_scores_gemma":[0.0003001194,0.00016743015,0.0000877472,0.00011737494,0.0002132982,6.572303e-7,0.00014498927,0.000056532437,9.348184e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054720636,0.000022609887,0.005624762,0.00002400003,0.00007830857,0.0000015420658,0.00009008018,0.000046478403,0.98974115,0.0012264341,0.00004293599,0.003046955],"study_design_scores_gemma":[0.00065956084,0.00051820267,0.0020214429,0.0000115540315,0.000027300523,0.000005994198,0.000045504312,0.00007583095,0.9888274,0.0060590054,0.0015596041,0.0001885639],"about_ca_topic_score_codex":0.000070872105,"about_ca_topic_score_gemma":0.000054822507,"teacher_disagreement_score":0.1380897,"about_ca_system_score_codex":0.000024043906,"about_ca_system_score_gemma":0.00006219575,"threshold_uncertainty_score":0.6827603},"labels":[],"label_agreement":null},{"id":"W2793964701","doi":"10.1007/978-1-4939-7765-9_3","title":"Identification of Response Elements on Promoters Using Site-Directed Mutagenesis and Chromatin Immunoprecipitation","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Chromatin immunoprecipitation; Promoter; Mutagenesis; Chromatin; Biology; ChIA-PET; Gene; Immunoprecipitation; Computational biology; Genetics; Transcription factor; In silico; Transcription (linguistics); Binding site; Identification (biology); Mutation; Gene expression","score_opus":0.01587878450468424,"score_gpt":0.3846697635827985,"score_spread":0.36879097907811426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2793964701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72657996,0.00024147987,0.272746,0.000029093893,0.00013579993,0.00023696304,0.000009097607,0.000009197746,0.000012381637],"genre_scores_gemma":[0.7426079,0.000024525594,0.2571541,0.00003570498,0.00003855533,0.000020831592,0.000067010005,0.000020669257,0.00003069834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740845,0.0015055692,0.00045007744,0.00039680276,0.00006878425,0.00017032561],"domain_scores_gemma":[0.9991914,0.000053835218,0.00026683425,0.00034044607,0.000120556884,0.00002691764],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015727903,0.00013689902,0.00017296568,0.00020866265,0.000045039887,0.000008202945,0.00009667596,0.00023029887,0.000008019219],"category_scores_gemma":[0.00064644666,0.00014723788,0.000044825578,0.0002510644,0.00018053754,0.0000035786136,0.00006744491,0.0000559362,0.0000014950904],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005901269,0.00003277112,0.001161575,0.000010894279,0.000041639723,5.0924706e-7,0.000127143,0.00016598629,0.9796879,0.00002172121,0.000003837727,0.018155886],"study_design_scores_gemma":[0.0005254448,0.000542764,0.01437996,0.000023308527,0.00002195823,0.000006110547,0.00002164797,0.0048876465,0.9790436,0.00024565915,0.0001677864,0.00013408904],"about_ca_topic_score_codex":0.000026717584,"about_ca_topic_score_gemma":0.000011431527,"teacher_disagreement_score":0.018021798,"about_ca_system_score_codex":0.000048988262,"about_ca_system_score_gemma":0.000048294532,"threshold_uncertainty_score":0.6004187},"labels":[],"label_agreement":null},{"id":"W2794018544","doi":"10.1007/978-1-4939-7765-9_14","title":"A Stool Multitarget mRNA Assay for the Detection of Colorectal Neoplasms","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Colorectal Cancer Screening and Detection","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"TaqMan; Messenger RNA; Colorectal cancer; Real-time polymerase chain reaction; Digital polymerase chain reaction; RNA; Computational biology; Medicine; Biology; Internal medicine; Cancer; Polymerase chain reaction; Gene; Genetics","score_opus":0.025726384981531913,"score_gpt":0.39058981858162706,"score_spread":0.36486343360009516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794018544","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15407017,0.0004139684,0.84407794,0.0001284803,0.00055430754,0.00047932193,0.0000042930033,0.000026281503,0.00024524287],"genre_scores_gemma":[0.59474087,0.000007320671,0.40490022,0.000112126974,0.00008126275,0.00011636111,0.0000028460483,0.000010745545,0.000028242823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988193,0.00046980588,0.00022790686,0.00023211578,0.000059532613,0.00019135638],"domain_scores_gemma":[0.9988584,0.00068591203,0.00009191084,0.00019152353,0.00014034809,0.000031898297],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001609002,0.00010146641,0.00024897914,0.00012945592,0.000059701946,0.0000034132756,0.00007898099,0.00017572858,0.000016490423],"category_scores_gemma":[0.0016286635,0.00007194342,0.00011845333,0.00028885124,0.00020649364,0.0000116996725,0.000036499154,0.00016569554,0.0000016435504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002539225,0.000026281554,0.00085843913,0.000013538683,0.000050554434,0.0000013122275,0.00011193212,0.000012574246,0.8447818,0.0000866235,0.000006506394,0.15151118],"study_design_scores_gemma":[0.0011476446,0.005277616,0.004034914,0.000014774781,0.0000639609,0.000042485182,0.0000689906,0.023940925,0.96031183,0.0009441086,0.0040695053,0.000083251696],"about_ca_topic_score_codex":0.00021085063,"about_ca_topic_score_gemma":0.0002336836,"teacher_disagreement_score":0.4406707,"about_ca_system_score_codex":0.0000577285,"about_ca_system_score_gemma":0.000046596342,"threshold_uncertainty_score":0.29337674},"labels":[],"label_agreement":null},{"id":"W2794361897","doi":"10.1007/978-1-4939-7765-9_21","title":"Use of Organoids to Characterize Signaling Pathways in Cancer Initiation","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Sinai Health System; McGill University Health Centre; Lunenfeld-Tanenbaum Research Institute","funders":"","keywords":"Organoid; Biology; Carcinogenesis; Morphogenesis; Cell biology; Cell culture; Colorectal cancer; Stem cell; Cell; Computational biology; Cancer; Cancer research; Gene; Genetics","score_opus":0.12056705688157753,"score_gpt":0.42823359083469625,"score_spread":0.3076665339531187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794361897","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70873976,0.0001651863,0.29036942,0.00021356613,0.00019441663,0.0002053193,0.000016337963,0.00000701105,0.000088993525],"genre_scores_gemma":[0.37073448,0.00008002229,0.62725675,0.0017506715,0.00008135918,0.000045531175,0.000016601096,0.000016406952,0.000018165889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987713,0.00042078886,0.00031700736,0.00023769117,0.000053881693,0.00019933433],"domain_scores_gemma":[0.99948263,0.0000960197,0.000076470445,0.00019643376,0.00009443332,0.000054025633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007048977,0.00009662092,0.00034631265,0.00027010878,0.0000091464835,0.0000033606318,0.000056575715,0.000113412716,0.00019623416],"category_scores_gemma":[0.00046956784,0.00008815355,0.00004578858,0.0004594377,0.000065558444,0.00002114381,0.000050147883,0.000113684735,0.000002883259],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012292116,0.00004561377,0.010325129,0.000025731511,0.000014966865,0.000013895226,0.00036381342,0.000006804462,0.92560583,0.00022250561,0.000005421145,0.06324737],"study_design_scores_gemma":[0.0004922451,0.00033570896,0.010641794,0.0000814535,0.00002291099,0.0000037628029,0.00002406371,0.000045619927,0.9829672,0.00026530641,0.0050331866,0.00008675449],"about_ca_topic_score_codex":0.00062236446,"about_ca_topic_score_gemma":0.00011661474,"teacher_disagreement_score":0.33800527,"about_ca_system_score_codex":0.00007661757,"about_ca_system_score_gemma":0.000095658295,"threshold_uncertainty_score":0.35947976},"labels":[],"label_agreement":null},{"id":"W2794365687","doi":"10.1007/978-1-4939-7780-2_16","title":"Expression of Genes Associated with Telomere Homeostasis in TP53 Mutant LoVo Cell Lines as a Model for Genomic Instability","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec; University of Manitoba; CancerCare Manitoba","funders":"","keywords":"Telomere; Genome instability; Biology; Gene; Mutant; Reverse transcriptase; Genetics; Homeostasis; Cell biology; Polymerase chain reaction; DNA; DNA damage","score_opus":0.038529079977196914,"score_gpt":0.38071049894740755,"score_spread":0.34218141897021065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794365687","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7393668,0.001002387,0.25872153,0.00009521384,0.00006322379,0.0006154896,0.000035051133,0.000022239668,0.00007801367],"genre_scores_gemma":[0.6217369,0.00009497543,0.37783828,0.00016821241,0.000025316114,0.000057242094,0.000027107937,0.000027304359,0.000024649513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99749285,0.00071426533,0.00061664655,0.0006003789,0.00011864182,0.00045723232],"domain_scores_gemma":[0.9985439,0.00037984143,0.0002323938,0.00050093606,0.00024578837,0.00009712654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013846894,0.00026510796,0.00080678356,0.00036263495,0.000039650706,0.0000045625097,0.00020361075,0.0003547631,0.000024947622],"category_scores_gemma":[0.0011497802,0.00020593956,0.00011447509,0.0004864539,0.00041742297,0.000029962019,0.00010003429,0.00021340906,0.0000015300685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008196386,0.00034842797,0.028289068,0.000115632574,0.000026433067,0.000021461436,0.0006902925,0.00009279029,0.9549827,0.00008670272,0.0000023460746,0.014524524],"study_design_scores_gemma":[0.0024501907,0.0009801238,0.0076399073,0.00015162722,0.000052265365,0.00001084714,0.00021902237,0.009530397,0.9765302,0.0020949582,0.0000995171,0.00024096317],"about_ca_topic_score_codex":0.00017024847,"about_ca_topic_score_gemma":0.00019861864,"teacher_disagreement_score":0.11911675,"about_ca_system_score_codex":0.0001222388,"about_ca_system_score_gemma":0.0002717032,"threshold_uncertainty_score":0.8397972},"labels":[],"label_agreement":null},{"id":"W2794407505","doi":"10.1007/978-1-4939-7474-0_10","title":"Imaging the Interactions Between B Cells and Antigen-Presenting Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Immunological synapse; Cell biology; B-cell receptor; Antigen; breakpoint cluster region; Antigen-presenting cell; Biology; B cell; Molecular biology; Chemistry; T cell; Antibody; Immune system; Receptor; T-cell receptor; Immunology; Biochemistry","score_opus":0.021851318969209648,"score_gpt":0.3559079699548126,"score_spread":0.33405665098560294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794407505","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6319555,0.0036718182,0.3567765,0.00070595066,0.0030109938,0.0003627269,0.000019697363,0.000084427,0.0034123717],"genre_scores_gemma":[0.9019216,0.0001510915,0.09614797,0.00060090306,0.00013142895,0.00002850172,0.000030709893,0.000033243672,0.00095461274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960182,0.0024467327,0.00041476605,0.00050983677,0.00001709021,0.0005934029],"domain_scores_gemma":[0.9984891,0.0007980675,0.0001545041,0.00047313617,0.0000639397,0.00002124152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011428106,0.00023623148,0.00038151944,0.00021327368,0.00031320567,0.000022767965,0.000434269,0.00025251744,0.00022756399],"category_scores_gemma":[0.00014052335,0.0001762737,0.00009569768,0.00024248431,0.0013032604,0.00004429508,0.0004827569,0.0006283706,0.0001932527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000151671375,0.000031118678,0.0107739745,0.0000040732043,0.000098900215,0.000007839125,0.0003358468,5.384254e-7,0.97023845,0.0006854195,0.00017873765,0.017629966],"study_design_scores_gemma":[0.00042767153,0.0000642286,0.00095434574,0.000009663176,0.000032458072,0.000054357195,0.00021207044,0.00001877481,0.8989052,0.0024628153,0.09667817,0.0001802403],"about_ca_topic_score_codex":0.00019630109,"about_ca_topic_score_gemma":0.000021278194,"teacher_disagreement_score":0.26996604,"about_ca_system_score_codex":0.000021532282,"about_ca_system_score_gemma":0.00002720596,"threshold_uncertainty_score":0.71882325},"labels":[],"label_agreement":null},{"id":"W2794417476","doi":"10.1007/978-1-4939-7765-9_10","title":"Autophagic Flux Assessment in Colorectal Cancer Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Autophagy; Autophagosome; Flux (metallurgy); Colorectal cancer; Cell biology; Programmed cell death; Cancer research; Cancer; Chemistry; Biology; Medicine; Biochemistry; Internal medicine; Apoptosis","score_opus":0.021510605565721444,"score_gpt":0.458984807861057,"score_spread":0.43747420229533557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794417476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83357877,0.0011359609,0.16025467,0.000296559,0.0005477172,0.00038125867,0.000006085884,0.00003500782,0.0037639912],"genre_scores_gemma":[0.5003012,0.00009235651,0.4971065,0.0019933435,0.00013624024,0.00014484506,0.000016451255,0.000025564234,0.00018348772],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818027,0.0007623048,0.00028276924,0.00035932413,0.000073206196,0.0003421203],"domain_scores_gemma":[0.9995023,0.00009683663,0.000058179736,0.00022059193,0.000041803527,0.00008028872],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007334649,0.00015520863,0.00037864337,0.00020501604,0.000022615888,0.0000045179745,0.00012424913,0.00020792747,0.0009459848],"category_scores_gemma":[0.00005437619,0.0001339195,0.00008074449,0.0003012853,0.00021631943,0.000014241525,0.000058055008,0.00027801187,0.000022423943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011244347,0.00015096355,0.009614662,0.000012616126,0.00004787755,0.0001406187,0.00012979048,0.000005360399,0.9703544,0.0011514911,0.000039754996,0.018240029],"study_design_scores_gemma":[0.0015069464,0.0004571958,0.044644684,0.000032080614,0.000020070227,0.000008621187,0.000030517804,0.000913617,0.94545823,0.005050317,0.0017430892,0.00013460935],"about_ca_topic_score_codex":0.00014191358,"about_ca_topic_score_gemma":0.00003211082,"teacher_disagreement_score":0.33685184,"about_ca_system_score_codex":0.00014749762,"about_ca_system_score_gemma":0.00021895858,"threshold_uncertainty_score":0.9999673},"labels":[],"label_agreement":null},{"id":"W2794585691","doi":"10.1007/978-1-4939-7756-7_18","title":"Applications of the NRGsuite and the Molecular Docking Software FlexAID in Computational Drug Discovery and Design","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Université de Montréal","funders":"","keywords":"Docking (animal); Computer science; Virtual screening; Protein–ligand docking; Software; Drug discovery; Plug-in; Computational biology; Bioinformatics; Programming language; Biology","score_opus":0.01779795043552932,"score_gpt":0.36574696321719175,"score_spread":0.3479490127816624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794585691","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021847824,0.0010483637,0.97520196,0.0011733205,0.00009686409,0.00055527344,0.0000033645356,0.0000148759145,0.00005812938],"genre_scores_gemma":[0.15987459,0.000010685339,0.8394249,0.000577842,0.000013548161,0.0000835219,0.0000015850657,0.000008151529,0.0000051593092],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99439126,0.004426177,0.00037474916,0.0004534399,0.0001445914,0.00020977212],"domain_scores_gemma":[0.9961928,0.0030855911,0.00016157243,0.00044987266,0.00008185426,0.000028272123],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036473516,0.00014977355,0.00026871084,0.00017564259,0.00009912276,0.000065326625,0.00072752597,0.00006903807,0.0000010773424],"category_scores_gemma":[0.0006778603,0.00010051743,0.000060200706,0.0007495197,0.00091219845,0.00012326014,0.00081853266,0.00019880886,4.126135e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043267883,0.000046982525,0.003002881,0.000023282313,0.000034979003,0.000004477069,0.0012244498,0.07849644,0.010226163,0.80538213,0.0000044635676,0.10151048],"study_design_scores_gemma":[0.0007631336,0.000028631908,0.005353102,0.000027653809,0.000009353482,0.000025069343,0.000029909077,0.22435774,0.011959032,0.75713104,0.00017481773,0.00014053985],"about_ca_topic_score_codex":0.000054911143,"about_ca_topic_score_gemma":0.000010249908,"teacher_disagreement_score":0.14586131,"about_ca_system_score_codex":0.00003040533,"about_ca_system_score_gemma":0.00010970397,"threshold_uncertainty_score":0.40989816},"labels":[],"label_agreement":null},{"id":"W2794596317","doi":"10.1007/978-1-4939-7759-8_25","title":"Automated Computational Inference of Multi-protein Assemblies from Biochemical Co-purification Data","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Inference; Computational biology; Coding (social sciences); Computer science; Organism; Function (biology); Biology; Artificial intelligence; Cell biology; Genetics; Mathematics","score_opus":0.05316452104607334,"score_gpt":0.4241866004419245,"score_spread":0.3710220793958512,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794596317","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16267973,0.0004583505,0.8362082,0.00005029865,0.00008605944,0.00016920891,0.00015948243,0.00002086372,0.000167783],"genre_scores_gemma":[0.36272594,0.000012595448,0.6349903,0.00011707197,0.000053036645,0.000010223678,0.002072192,0.00001031309,0.000008368747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840987,0.00040320863,0.0004713841,0.00043080925,0.000066753404,0.00021800681],"domain_scores_gemma":[0.9987969,0.00007140289,0.0002050083,0.00075560977,0.00012305343,0.000048024755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075070775,0.00015996073,0.00023913318,0.00008086963,0.00003396939,0.000012382771,0.00060082425,0.00035380668,0.000021394408],"category_scores_gemma":[0.00044197505,0.00015577576,0.000043250744,0.0001478113,0.000377633,0.000004669651,0.00034479436,0.00012291528,0.000007955926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003840871,0.000057536836,0.0006529584,0.00000888509,0.000049928884,5.7754903e-7,0.00003616219,0.00011564731,0.9917582,0.0007067183,0.00023810708,0.006336846],"study_design_scores_gemma":[0.0006612823,0.00017442729,0.0013301151,0.00002165746,0.000013695492,0.0000025830786,0.000031209798,0.14410019,0.8459149,0.0055937413,0.0019253384,0.00023087437],"about_ca_topic_score_codex":0.00006398777,"about_ca_topic_score_gemma":0.000014082519,"teacher_disagreement_score":0.20121796,"about_ca_system_score_codex":0.000010698337,"about_ca_system_score_gemma":0.00009180142,"threshold_uncertainty_score":0.63523513},"labels":[],"label_agreement":null},{"id":"W2794635858","doi":"10.1007/978-1-4939-7759-8_12","title":"Global Characterization of Protein Complexes by Biochemical Purification-Mass Spectrometry (BP/MS)","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"Mass spectrometry; Chemistry; Chromatography; Tandem mass spectrometry; Protein mass spectrometry; Protein purification; Ion chromatography; Characterization (materials science); Tandem mass tag; Ion exchange; Proteomics; Quantitative proteomics; Biochemistry; Ion; Materials science; Nanotechnology; Organic chemistry","score_opus":0.012905939697075807,"score_gpt":0.3683683157292336,"score_spread":0.3554623760321578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2794635858","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2229842,0.00007329518,0.7753077,0.000140283,0.00001138342,0.00017872949,0.00011531947,0.000047604353,0.0011414657],"genre_scores_gemma":[0.11067778,0.000016165392,0.8887286,0.000059680482,0.000039448954,0.00016665619,0.00025834193,0.000013731201,0.000039588038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892735,0.00011158061,0.00034825673,0.00035438198,0.000054565513,0.00020388627],"domain_scores_gemma":[0.9992467,0.00003112078,0.00019729327,0.00040934366,0.000076838,0.000038675455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024556322,0.00013440331,0.00022636619,0.00005136135,0.00003258094,0.0000064257656,0.0003014472,0.00023392942,0.00016693835],"category_scores_gemma":[0.00013564552,0.00014011604,0.00005100864,0.00037281733,0.00028750225,0.000020435786,0.00006841553,0.00011869776,0.0000029114879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016012023,0.00005696038,0.00063566724,0.000018937095,0.000009888655,2.9791957e-7,0.000005842251,1.5500314e-7,0.97955173,0.017148104,0.000010996947,0.0025453863],"study_design_scores_gemma":[0.00012696206,0.00003588836,0.000063914034,0.000014614946,0.0000051958004,0.0000023879034,0.0000042077877,0.00011037904,0.9483525,0.048007388,0.0031494962,0.0001270714],"about_ca_topic_score_codex":0.000020072093,"about_ca_topic_score_gemma":5.4054664e-7,"teacher_disagreement_score":0.11342088,"about_ca_system_score_codex":0.00007016777,"about_ca_system_score_gemma":0.000022332517,"threshold_uncertainty_score":0.5713766},"labels":[],"label_agreement":null},{"id":"W2795274203","doi":"10.1007/978-1-4939-7756-7_6","title":"Molecular Dynamics Simulation and Prediction of Druggable Binding Sites","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Druggability; Identification (biology); Computational biology; Flexibility (engineering); Molecular dynamics; Drug discovery; Binding site; Computer science; Chemistry; Bioinformatics; Biology; Computational chemistry; Biochemistry; Mathematics","score_opus":0.0298367249153804,"score_gpt":0.4040306990307062,"score_spread":0.3741939741153258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2795274203","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22638462,0.0001218204,0.7727242,0.0000812436,0.00018189655,0.00011928628,0.0000066517873,0.000032569675,0.00034772384],"genre_scores_gemma":[0.30484968,0.000002551604,0.69503963,0.00006303131,0.000014179644,0.000006027909,0.000011787263,0.0000072339985,0.0000058846676],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9975165,0.0013985516,0.00033884213,0.00042805003,0.00010700348,0.00021105868],"domain_scores_gemma":[0.99867773,0.0006928538,0.00013522706,0.0003328502,0.00012042728,0.000040914845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018123378,0.0001288626,0.00022766892,0.00034185385,0.00004425738,0.000026200083,0.00031856945,0.00012501104,0.0000040949244],"category_scores_gemma":[0.00064511545,0.0001336949,0.00004725073,0.0006329987,0.0001824169,0.00013545743,0.0003256693,0.000112986105,0.0000015328262],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013786904,0.000044332584,0.0053560464,0.000023647926,0.000030175466,0.0000073733117,0.00037708765,0.09831903,0.651491,0.1733488,0.0000013075978,0.07098741],"study_design_scores_gemma":[0.00018256772,0.00012191437,0.0011567477,0.000011661062,0.0000057963157,0.0000055071864,0.0000112951,0.816663,0.10245497,0.07923966,0.000058186935,0.0000886493],"about_ca_topic_score_codex":0.000018104574,"about_ca_topic_score_gemma":0.0000037861098,"teacher_disagreement_score":0.71834403,"about_ca_system_score_codex":0.00007726375,"about_ca_system_score_gemma":0.00006235847,"threshold_uncertainty_score":0.545192},"labels":[],"label_agreement":null},{"id":"W2799572968","doi":"10.1007/978-1-4939-7811-3_22","title":"Discriminating Strains of Self-Propagating Protein Aggregates Using a Conformational Stability Assay","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Prion Diseases and Protein Misfolding","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"","keywords":"Protein aggregation; Denaturation (fissile materials); Prion protein; Amyloid (mycology); Biophysics; Chemistry; Protein folding; Protein structure; Peptide; Biology; Biochemistry; Disease; Medicine","score_opus":0.03533657071072136,"score_gpt":0.3918410815014558,"score_spread":0.3565045107907344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799572968","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5542759,0.0006665642,0.44441834,0.000024074136,0.000048095197,0.00029080655,0.000018184157,0.000010394737,0.00024767025],"genre_scores_gemma":[0.5002249,0.000010541742,0.4996058,0.000047651894,0.000048075963,0.000022198588,0.000027390794,0.0000114319755,0.0000020064842],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974994,0.0012009965,0.00049894536,0.00037878586,0.00009649831,0.00032539378],"domain_scores_gemma":[0.99908155,0.000048744572,0.00028083858,0.00033723612,0.00018685099,0.00006478867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002182786,0.00018201358,0.000259984,0.000088976136,0.00008275612,0.000013968928,0.00024657277,0.00020534542,0.000052413878],"category_scores_gemma":[0.0014780388,0.00017365928,0.00011316619,0.00017868429,0.0002762552,0.000007022359,0.00023818074,0.00012690597,8.059239e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029868246,0.00005199939,0.0025929918,0.00006575637,0.000036659887,0.0000014280452,0.00010302519,0.00002041531,0.9622872,0.0013964075,5.2316807e-7,0.03341373],"study_design_scores_gemma":[0.00037126645,0.00027217946,0.0004020313,0.000056207366,0.000015978128,0.000007702684,0.00018384343,0.0045537627,0.99047613,0.0031616923,0.0002945825,0.00020464213],"about_ca_topic_score_codex":0.00004506549,"about_ca_topic_score_gemma":0.000011816149,"teacher_disagreement_score":0.055187482,"about_ca_system_score_codex":0.000031797943,"about_ca_system_score_gemma":0.00015554248,"threshold_uncertainty_score":0.708162},"labels":[],"label_agreement":null},{"id":"W2799655513","doi":"10.1007/978-1-4939-7799-4_8","title":"High Definition Confocal Imaging Modalities for the Characterization of Tissue-Engineered Substitutes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital de l'Enfant-Jésus; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Characterization (materials science); Confocal microscopy; Biomedical engineering; Confocal; Tissue engineering; Materials science; Nanotechnology; Cell biology; Biology; Optics; Medicine","score_opus":0.01824028631909993,"score_gpt":0.37540777011239096,"score_spread":0.35716748379329105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799655513","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.058315977,0.00036060173,0.9405249,0.00012940378,0.00020446262,0.0003575525,0.00005112542,0.000017601167,0.000038394195],"genre_scores_gemma":[0.17252672,0.00008973124,0.82666576,0.00020293576,0.000096178475,0.00012100737,0.0002599687,0.000020284091,0.000017404962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99902165,0.00020839534,0.0002611095,0.00026350172,0.000034133303,0.00021118674],"domain_scores_gemma":[0.99936485,0.00007295033,0.00010565635,0.00029469514,0.00014390568,0.000017912276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050272583,0.00013402825,0.00017794604,0.00006677138,0.00004902454,0.0000075915123,0.00020926874,0.00014057639,0.0000070293427],"category_scores_gemma":[0.00036068913,0.0001120081,0.000050155246,0.00009776783,0.00044489966,0.0000043526397,0.00007497547,0.000065842556,4.8558655e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006152987,0.000013744928,0.00017138671,0.0000127927215,0.0000147423,4.0663338e-7,0.000027617016,0.000006799179,0.9759049,0.0153422,0.000007465976,0.008436417],"study_design_scores_gemma":[0.00023810792,0.00019608033,0.00030449234,0.000012246663,0.000012612058,0.000005028217,0.000018661076,0.00024616465,0.9875514,0.008038934,0.003255644,0.000120609155],"about_ca_topic_score_codex":0.000019959398,"about_ca_topic_score_gemma":0.0000048471484,"teacher_disagreement_score":0.11421074,"about_ca_system_score_codex":0.000012181536,"about_ca_system_score_gemma":0.000030369963,"threshold_uncertainty_score":0.4567558},"labels":[],"label_agreement":null},{"id":"W2799780419","doi":"10.1007/978-1-4939-7828-1_19","title":"Perinatal Psychoneuroimmunology: Protocols for the Study of Prenatal Stress and Its Effects on Fetal and Postnatal Brain Development","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Stress Responses and Cortisol","field":"Neuroscience","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Prenatal stress; In utero; Offspring; Psychoneuroimmunology; Fetal programming; Fetus; Psychology; Pregnancy; Chronic stress; Cognition; Developmental psychology; Prenatal development; Medicine; Neuroscience; Immunology; Biology; Immune system","score_opus":0.04773848024246918,"score_gpt":0.4380215317516066,"score_spread":0.3902830515091374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2799780419","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97161925,0.00019384752,0.019156268,0.00009536983,0.00013236301,0.008758241,0.000017141614,0.000012467686,0.000015055469],"genre_scores_gemma":[0.9742652,0.000013202664,0.019643325,0.00026754808,0.000021890526,0.005742061,0.0000010711062,0.00001924832,0.000026410475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99770343,0.0012325095,0.0002335459,0.00049774384,0.00008711154,0.00024568132],"domain_scores_gemma":[0.997852,0.001746395,0.00009519397,0.00024433818,0.000032634376,0.00002939145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002672278,0.00016175225,0.0002317484,0.00010999852,0.00012261202,0.000016213344,0.00026607764,0.000096671945,0.0000033086458],"category_scores_gemma":[0.0018140537,0.00011274457,0.000025881387,0.00013130317,0.00025783156,0.000022181519,0.00025019693,0.00015949637,5.626314e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001155998,0.00017586541,0.0011163246,0.000074761716,0.000020769865,0.000040385086,0.0005896025,0.0000010087692,0.83749413,0.00085506897,6.486284e-7,0.15847544],"study_design_scores_gemma":[0.0017429589,0.005063321,0.023361648,0.00005223974,0.000006238977,0.000054659773,0.0000880507,0.0002739198,0.968702,0.00011431429,0.00041653402,0.00012407874],"about_ca_topic_score_codex":0.000006472378,"about_ca_topic_score_gemma":0.000008326276,"teacher_disagreement_score":0.15835138,"about_ca_system_score_codex":0.000008671491,"about_ca_system_score_gemma":0.000026936876,"threshold_uncertainty_score":0.45975903},"labels":[],"label_agreement":null},{"id":"W2800230147","doi":"10.1007/978-1-4939-7778-9_16","title":"Novel Multiplexing Strategies for Quantification of Rare Alleles Using ddPCR","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Innovative Microfluidic and Catalytic Techniques Innovation","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research","keywords":"Digital polymerase chain reaction; Allele; Leverage (statistics); Computational biology; Multiplexing; Mutant; Genetics; Biology; Computer science; Polymerase chain reaction; Gene; Machine learning","score_opus":0.0760047535221788,"score_gpt":0.4116471989419163,"score_spread":0.33564244541973753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800230147","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02147462,0.0001929548,0.9775255,0.000010086253,0.00017384416,0.00023276961,0.00002092054,0.00007207348,0.0002972444],"genre_scores_gemma":[0.31429818,0.000002216799,0.6855747,0.000022387796,0.000024882105,0.000020929097,0.000039366732,0.000015378295,0.000001974166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999235,0.00006252334,0.00035017883,0.00016083755,0.000028606988,0.00016288889],"domain_scores_gemma":[0.99948424,0.00006789905,0.000073385854,0.00017969016,0.00018738088,0.00000742108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079775264,0.00010727306,0.00018632317,0.0002032133,0.000025220119,0.0000066107136,0.00012669743,0.00014807853,0.0000054280827],"category_scores_gemma":[0.00013548264,0.00011052405,0.000033721088,0.00035986444,0.000166855,0.000042084914,0.00002554376,0.000078700585,2.8508111e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000844744,0.000009907946,0.00003896978,0.000041269413,0.000016587817,1.5837277e-7,0.00012055665,0.00023625721,0.8982087,0.09033693,0.000013466872,0.010968783],"study_design_scores_gemma":[0.00019307442,0.000048917893,0.00004370287,0.000021654172,0.0000047112,0.0000031340287,0.00016991897,0.03204717,0.9539489,0.01217829,0.0012307529,0.0001097752],"about_ca_topic_score_codex":0.000019682382,"about_ca_topic_score_gemma":0.0000011871127,"teacher_disagreement_score":0.29282355,"about_ca_system_score_codex":0.000042559725,"about_ca_system_score_gemma":0.000027773833,"threshold_uncertainty_score":0.45070398},"labels":[],"label_agreement":null},{"id":"W2800235700","doi":"10.1007/978-1-4939-7841-0_1","title":"An Introduction to Epitope Mapping","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre","funders":"Knut och Alice Wallenbergs Stiftelse; VINNOVA","keywords":"Epitope; Antigen; Computational biology; Epitope mapping; Antibody; Linear epitope; Biology; Chemistry; Immunology","score_opus":0.048457280430426575,"score_gpt":0.487598220733034,"score_spread":0.4391409403026074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800235700","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3162513,0.0001527045,0.66928244,0.012281204,0.0003776619,0.00022960528,0.0000018541821,0.000025386222,0.0013978393],"genre_scores_gemma":[0.020215154,0.000019870022,0.9756127,0.0022725705,0.0013573196,0.000022038075,0.00002041631,0.000013462742,0.00046649814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837554,0.0006729164,0.00019386108,0.0003697978,0.00007743303,0.00031048385],"domain_scores_gemma":[0.9993659,0.000053632793,0.000021175085,0.0003176761,0.000101338635,0.00014024606],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011813063,0.000098487864,0.0002327639,0.00026862868,0.000042474116,0.0000066643483,0.00012434345,0.00010733166,0.00028190447],"category_scores_gemma":[0.00044474198,0.00008018869,0.000045201155,0.00037633942,0.0001600698,0.000016944716,0.00007962899,0.00019064001,0.00007354778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013821972,0.00004436196,0.0036689725,0.000010461955,0.000015397738,0.000024167352,0.00012520938,0.0000012245084,0.86104184,0.0040676747,0.00022254487,0.13063993],"study_design_scores_gemma":[0.00033526367,0.0015615837,0.010226546,0.000014049662,0.000007897672,0.00009444836,0.0000631848,0.00036830467,0.6350589,0.00474307,0.34738046,0.00014629606],"about_ca_topic_score_codex":0.000093558745,"about_ca_topic_score_gemma":0.000010858749,"teacher_disagreement_score":0.34715793,"about_ca_system_score_codex":0.00003464572,"about_ca_system_score_gemma":0.00003523875,"threshold_uncertainty_score":0.327},"labels":[],"label_agreement":null},{"id":"W2800378832","doi":"10.1007/978-1-4939-7828-1_18","title":"Sculpting the Sculptors: Methods for Studying the Fetal Cholinergic Signaling on Systems and Cellular Scales","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Vagus Nerve Stimulation Research","field":"Neuroscience","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Cholinergic; Neuroscience; Biology; Vagus nerve; Microglia; Signal transduction; Vagus nerve stimulation; Acetylcholine; Phenotype; Cell biology; Stimulation; Immunology; Endocrinology; Inflammation; Genetics","score_opus":0.1456198033027981,"score_gpt":0.5027054147451718,"score_spread":0.3570856114423737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800378832","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18807077,0.00074211287,0.80904365,0.00046446573,0.00044193838,0.0009701263,0.0000031818515,0.000033920314,0.0002298215],"genre_scores_gemma":[0.56631994,0.000008806083,0.43270665,0.00047818405,0.00021558172,0.0001932972,0.0000013904188,0.00003241698,0.000043742773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98690975,0.01122117,0.00044274153,0.0007026313,0.0001784048,0.00054531853],"domain_scores_gemma":[0.99180865,0.0073211915,0.00015716012,0.0005434184,0.00010670132,0.000062895655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.011349795,0.00022393905,0.00032257516,0.00019879443,0.0006550342,0.00012569748,0.0006384516,0.0001519506,0.0000067091355],"category_scores_gemma":[0.0078627635,0.00012697623,0.000116349256,0.0005771931,0.0007575101,0.000039252187,0.00031779186,0.0004128249,0.0000045064457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003514902,0.000022352124,0.00035450354,0.000017986502,0.000013756062,0.000003236548,0.0002694702,0.002453309,0.9706271,0.009817206,0.0000035248815,0.016382353],"study_design_scores_gemma":[0.0005265003,0.0003230365,0.00011152923,0.000031779193,0.000017450795,0.00001379808,0.00031302733,0.1672109,0.82579225,0.004159803,0.0013105263,0.00018938474],"about_ca_topic_score_codex":0.00003386776,"about_ca_topic_score_gemma":0.0000023354648,"teacher_disagreement_score":0.37824914,"about_ca_system_score_codex":0.000046603145,"about_ca_system_score_gemma":0.000030851676,"threshold_uncertainty_score":0.941303},"labels":[],"label_agreement":null},{"id":"W2800520032","doi":"10.1007/978-1-4939-7847-2_1","title":"Nutrient Stress Small-Molecule Screening Platform for Escherichia coli","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Escherichia coli; Antibiotics; Bacteria; Biology; Nutrient; Drug development; Nutrient sensing; Drug discovery; Small molecule; Biochemistry; Drug; Computational biology; Microbiology; Genetics; Gene; Pharmacology; Signal transduction","score_opus":0.028713704651928462,"score_gpt":0.35083337967617495,"score_spread":0.3221196750242465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2800520032","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.389848,0.00039405713,0.6085567,0.00014630654,0.00035354617,0.00039721755,0.000037028785,0.000019950794,0.00024723294],"genre_scores_gemma":[0.12776072,0.000091237576,0.870558,0.0006504713,0.00037941485,0.00017536402,0.0002270887,0.00005842794,0.000099243414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977704,0.00028809696,0.0004353527,0.00078430976,0.000055246466,0.0006665815],"domain_scores_gemma":[0.99892306,0.000046536763,0.00015523349,0.0006132309,0.00016250493,0.00009940783],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008005475,0.00031018388,0.00036640101,0.0001534259,0.000105171435,0.000025993253,0.00051791075,0.00082492287,0.00002029586],"category_scores_gemma":[0.00040846682,0.00030218152,0.00016384406,0.00025983207,0.0004145767,0.0000019711442,0.00039003114,0.00019206156,0.0000037534528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023985012,0.00007869422,0.00039068918,0.000015704021,0.00006895848,0.000003570892,0.000021751954,0.000005556004,0.98259014,0.0031939866,0.0000503698,0.013340728],"study_design_scores_gemma":[0.0010657051,0.0012071258,0.00014234276,0.000015243378,0.000022213628,0.000007587717,0.000049181173,0.00027736838,0.9522757,0.0023337048,0.04224435,0.00035950777],"about_ca_topic_score_codex":0.000032759446,"about_ca_topic_score_gemma":0.000083080515,"teacher_disagreement_score":0.26208726,"about_ca_system_score_codex":0.000020068761,"about_ca_system_score_gemma":0.00007488839,"threshold_uncertainty_score":0.999943},"labels":[],"label_agreement":null},{"id":"W2801796651","doi":"10.1007/978-1-4939-7778-9_30","title":"Highly Efficient and Reliable DNA Aptamer Selection Using the Partitioning Capabilities of ddPCR: The Hi-Fi SELEX Method","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Aptamer; Systematic evolution of ligands by exponential enrichment; Computational biology; Selection (genetic algorithm); DNA; Digital polymerase chain reaction; Computer science; Biology; Genetics; Gene; Polymerase chain reaction; RNA; Artificial intelligence","score_opus":0.01757428898875883,"score_gpt":0.3839802194197229,"score_spread":0.36640593043096403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801796651","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37363544,0.00039298853,0.6254822,0.0001618159,0.000060701215,0.0001401892,0.0000031961424,0.000012308325,0.0001111316],"genre_scores_gemma":[0.45895272,0.0000460694,0.5406415,0.00022480066,0.00006791354,0.000011621991,0.00000666418,0.000011979362,0.000036762303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99757713,0.0013207406,0.00033619386,0.00041447807,0.00007492114,0.00027650947],"domain_scores_gemma":[0.9991169,0.00012328073,0.00017570014,0.00037923854,0.00017760489,0.000027301548],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021829433,0.00017222048,0.0002487085,0.00007996535,0.00018587448,0.000015019935,0.00017288864,0.00020817797,0.0000026151365],"category_scores_gemma":[0.00039764226,0.00010520707,0.00009651433,0.0003334,0.00077114097,0.000002332841,0.0001531866,0.00015420145,2.0133224e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003486813,0.000021984784,0.00065271044,0.000007741361,0.000049931536,3.6230557e-7,0.00009079354,0.00025821256,0.9944651,0.0009134059,0.000018754985,0.003486143],"study_design_scores_gemma":[0.00012735551,0.000245094,0.00011306149,0.000014884898,0.000056605153,0.0000299412,0.00023289346,0.0065779937,0.986512,0.0021441577,0.003808916,0.00013706447],"about_ca_topic_score_codex":0.0001738732,"about_ca_topic_score_gemma":0.00004556785,"teacher_disagreement_score":0.08531728,"about_ca_system_score_codex":0.00002337802,"about_ca_system_score_gemma":0.000044736284,"threshold_uncertainty_score":0.42902198},"labels":[],"label_agreement":null},{"id":"W2801907480","doi":"10.1007/978-1-4939-7799-4_6","title":"Decellularized Adipose Tissue Scaffolds for Soft Tissue Regeneration and Adipose-Derived Stem/Stromal Cell Delivery","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Western University","funders":"","keywords":"Decellularization; Adipose tissue; Extracellular matrix; Tissue engineering; Stromal cell; Adipogenesis; Stem cell; Cell biology; Mesenchymal stem cell; Scaffold; Regeneration (biology); Biomedical engineering; Chemistry; Regenerative medicine; Biology; Pathology; Medicine; Biochemistry","score_opus":0.022582304948311854,"score_gpt":0.3528498754516252,"score_spread":0.33026757050331335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801907480","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26300642,0.015828144,0.7195014,0.00035286215,0.00052367,0.0006551316,0.000007479083,0.000060238897,0.000064666034],"genre_scores_gemma":[0.19776402,0.000093556344,0.7987712,0.00018305151,0.00053073536,0.000103732214,0.00009075842,0.000059288326,0.0024036348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790806,0.0005616819,0.00042352136,0.00057884265,0.00009703047,0.00043085555],"domain_scores_gemma":[0.9989838,0.00020633932,0.00009840809,0.00036245436,0.00016719887,0.00018180994],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00095635414,0.00029955036,0.0006336362,0.0002625791,0.00009508976,0.000013141245,0.00010950199,0.00037296934,0.00004223163],"category_scores_gemma":[0.0001976466,0.00025486047,0.00006261906,0.00021891104,0.0002758088,0.000027794342,0.00006352907,0.00015900379,0.00000788097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017113039,0.000059964117,0.00016414712,0.00009404744,0.00006672826,0.00005073341,0.00022833086,0.000020352618,0.9444934,0.0007948289,0.00009388742,0.053762443],"study_design_scores_gemma":[0.002883249,0.0024226375,0.00017266041,0.0000661207,0.000170649,0.00010176725,0.000039682076,0.0036818578,0.9651648,0.00021531545,0.024832673,0.00024858315],"about_ca_topic_score_codex":0.000038136543,"about_ca_topic_score_gemma":0.000014070331,"teacher_disagreement_score":0.079269834,"about_ca_system_score_codex":0.00005701041,"about_ca_system_score_gemma":0.000075359654,"threshold_uncertainty_score":0.99999034},"labels":[],"label_agreement":null},{"id":"W2801918275","doi":"10.1007/978-1-4939-7841-0_12","title":"Kinetic Analysis and Epitope Binning Using Surface Plasmon Resonance","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre","funders":"Vetenskapsrådet","keywords":"Surface plasmon resonance; Epitope; Component (thermodynamics); Drug discovery; Plasmon; Resonance (particle physics); Chemistry; Epitope mapping; Computational biology; Nanotechnology; Materials science; Physics; Biology; Antigen; Biochemistry; Optoelectronics; Nanoparticle; Atomic physics","score_opus":0.05324759897637333,"score_gpt":0.4685732006539647,"score_spread":0.41532560167759136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2801918275","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72698593,0.003047853,0.26899204,0.00030518716,0.00005527525,0.00010140503,0.0000032626288,0.000009810528,0.00049922906],"genre_scores_gemma":[0.18960603,0.00023328542,0.8094953,0.00036235768,0.00005653081,0.0000027314613,0.0000083123405,0.000012147782,0.00022334149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982281,0.00069468404,0.00024543938,0.00038498972,0.000098303084,0.00034853135],"domain_scores_gemma":[0.99931574,0.00023453221,0.000047285288,0.00022916956,0.00007851155,0.000094770694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097488647,0.00013393967,0.00043106676,0.0002954084,0.000060630275,0.000008969377,0.00009373145,0.0001401036,0.00008247002],"category_scores_gemma":[0.00032602478,0.00010869971,0.000085078675,0.00091581093,0.0004161967,0.000013332971,0.0001465048,0.00022480058,0.0000049736595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014347724,0.000021027245,0.17289062,0.000018534043,0.00012287076,0.000072771916,0.00007205369,0.000025152516,0.8009474,0.0005203546,0.000004382324,0.025161346],"study_design_scores_gemma":[0.0011460293,0.00095675804,0.12577724,0.00010038039,0.0004084994,0.00015294162,0.000054711127,0.061953764,0.78892726,0.0027949056,0.017336959,0.0003905379],"about_ca_topic_score_codex":0.000741415,"about_ca_topic_score_gemma":0.00003954456,"teacher_disagreement_score":0.5405032,"about_ca_system_score_codex":0.000028137318,"about_ca_system_score_gemma":0.00003684387,"threshold_uncertainty_score":0.44326454},"labels":[],"label_agreement":null},{"id":"W2802412509","doi":"10.1007/978-1-4939-7695-9_8","title":"A Proteomics Workflow for Dual Labeling Biotin Switch Assay to Detect and Quantify Protein S-Nitroylation","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research","keywords":"Cysteine; Proteomics; S-Nitrosylation; Chemistry; Biotin; Quantitative proteomics; Thiol; Moiety; Biochemistry; Combinatorial chemistry; Amino acid; Streptavidin; Computational biology; Biology; Stereochemistry","score_opus":0.02963763294012744,"score_gpt":0.4097876019165646,"score_spread":0.38014996897643716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2802412509","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12682204,0.00006850785,0.87149197,0.00031469943,0.00001974441,0.0010339561,0.000016681539,0.000076348464,0.0001560726],"genre_scores_gemma":[0.018260214,0.000005729959,0.9798764,0.00013263364,0.00008573462,0.0015257951,0.000017909248,0.00003525115,0.000060328653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987309,0.00014652046,0.00030628385,0.00047342567,0.000038976268,0.00030391934],"domain_scores_gemma":[0.9992706,0.0001524318,0.00011033473,0.00031619042,0.00009088605,0.00005953049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010933293,0.00016598398,0.00022814138,0.00009909142,0.00009650128,0.000020071262,0.00014512114,0.0002880512,0.000014123098],"category_scores_gemma":[0.00080306636,0.00016701555,0.000044410102,0.00021697275,0.00009460109,0.000019468236,0.000120762175,0.00019912225,0.0000021253145],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005815822,0.000010358874,0.0001258202,0.000024910818,0.000008566792,6.395648e-7,0.000041079908,0.000008088054,0.92731726,0.003990329,0.0000027742904,0.06841198],"study_design_scores_gemma":[0.00026371048,0.00010577033,0.000006616332,0.000039496772,0.0000072730127,0.0000040231366,0.000009384152,0.0014796533,0.8822625,0.112591885,0.0030501795,0.00017949665],"about_ca_topic_score_codex":0.000022146445,"about_ca_topic_score_gemma":0.000014227739,"teacher_disagreement_score":0.108601555,"about_ca_system_score_codex":0.000048312522,"about_ca_system_score_gemma":0.00002744274,"threshold_uncertainty_score":0.6810696},"labels":[],"label_agreement":null},{"id":"W2803627866","doi":"10.1007/978-1-4939-7865-6_14","title":"Microfluidic Production and Application of Lipid Nanoparticles for Nucleic Acid Transfection","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Precision Nanosystems (Canada)","funders":"","keywords":"Nucleic acid; Biopharmaceutical; Microfluidics; Transfection; Nanotechnology; Chemistry; Computational biology; Biochemistry; Biology; Biotechnology; Materials science; Gene","score_opus":0.014735858742769541,"score_gpt":0.34901602457634145,"score_spread":0.3342801658335719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803627866","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5222611,0.0011445864,0.47621906,0.000064065425,0.000106089086,0.00017700934,0.0000031141608,0.0000035744765,0.000021431006],"genre_scores_gemma":[0.8880357,0.00047303122,0.11110717,0.00009990795,0.00014290526,0.00008856082,0.000023963694,0.000012379484,0.000016371181],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990956,0.0002085855,0.00020003681,0.0003322171,0.00002157186,0.00014197927],"domain_scores_gemma":[0.99962586,0.0000116658875,0.000055160323,0.0001921998,0.00009355129,0.000021583524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000501511,0.000091563044,0.00013387685,0.00006782508,0.000033162614,0.0000035962723,0.00008011544,0.00014956917,0.0000024671588],"category_scores_gemma":[0.00017127392,0.000089294364,0.000046631918,0.00009265041,0.00020068484,0.0000026582902,0.000028730681,0.000036124384,9.323562e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013396206,0.000031572006,0.0010383511,0.000019036335,0.000018833514,6.3899385e-8,0.000045761535,0.0000011131403,0.9561222,0.00019326567,0.000055957633,0.042339854],"study_design_scores_gemma":[0.00022009884,0.0008163371,0.00041246193,0.000007702172,0.000013132041,0.00000799874,0.000028372218,0.00006989844,0.9929654,0.0010675373,0.0042994414,0.000091632064],"about_ca_topic_score_codex":0.000014128616,"about_ca_topic_score_gemma":0.000017996348,"teacher_disagreement_score":0.36577466,"about_ca_system_score_codex":0.0000062057043,"about_ca_system_score_gemma":0.000015921809,"threshold_uncertainty_score":0.36413184},"labels":[],"label_agreement":null},{"id":"W2803880697","doi":"10.1007/978-1-4939-7834-2_11","title":"Current and Future Methods for mRNA Analysis: A Drive Toward Single Molecule Sequencing","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":68,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; McGill University and Génome Québec Innovation Centre","funders":"","keywords":"Transcriptome; Computational biology; RNA; RNA-Seq; Biology; RNA editing; Messenger RNA; Non-coding RNA; Genetics; Gene; Gene expression","score_opus":0.08095219596312193,"score_gpt":0.49755452074625156,"score_spread":0.41660232478312964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2803880697","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000026058356,0.49871472,0.49958393,0.00002378081,0.000441232,0.0010796116,0.00006655011,0.000017491866,0.00007005926],"genre_scores_gemma":[6.7509757e-7,0.52504164,0.4730046,0.000077339166,0.00044635867,0.00064332143,0.0006422801,0.00011548442,0.000028271572],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98901474,0.0059612687,0.0012489419,0.002401278,0.00018567198,0.0011880809],"domain_scores_gemma":[0.9970258,0.0002837378,0.00062099734,0.0014297873,0.00033927616,0.00030041067],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.004046308,0.0010519677,0.0027584655,0.0012698218,0.00012449962,0.000082923994,0.0009765739,0.0019749962,0.00002666719],"category_scores_gemma":[0.0011314047,0.0009793042,0.0015905598,0.0016473796,0.00040688255,0.000005667621,0.00094412395,0.00094249175,0.0000038414705],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046121924,0.00006302212,5.7515064e-7,0.0020424053,0.0019540682,0.000013224052,0.000050823623,0.0000074943987,0.15215527,0.0005186317,0.00005946421,0.8430889],"study_design_scores_gemma":[0.000542149,0.00077408296,2.1103988e-7,0.0005701234,0.0026527701,0.00006927152,0.000039824776,0.0002925642,0.06534615,0.0012006332,0.92752856,0.0009836383],"about_ca_topic_score_codex":0.00002330531,"about_ca_topic_score_gemma":0.000023156463,"teacher_disagreement_score":0.92746913,"about_ca_system_score_codex":0.00034484078,"about_ca_system_score_gemma":0.000756467,"threshold_uncertainty_score":0.9993206},"labels":[],"label_agreement":null},{"id":"W2804278610","doi":"10.1007/978-1-4939-7837-3_15","title":"Quantitative Phagocytosis Assays in Primary and Cultured Macrophages","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; St. Michael's Hospital; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Phagocytosis; Opsonin; Macrophage; Antibody; Monocyte; Cell culture; Immunology; Cell biology; Biology; Myeloid cells; Chemistry; Myeloid; In vitro; Biochemistry; Genetics","score_opus":0.024271812534409822,"score_gpt":0.38543537694906177,"score_spread":0.36116356441465197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804278610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63286525,0.021098915,0.34167376,0.00030515698,0.0006251901,0.00040753908,0.000015829173,0.00004580719,0.0029625134],"genre_scores_gemma":[0.573615,0.0003481621,0.4249682,0.00055530167,0.00002176551,0.000064837266,0.000103135215,0.00002659942,0.00029697476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965328,0.0022333497,0.0003887657,0.00044993663,0.000018590508,0.00037656596],"domain_scores_gemma":[0.9993165,0.0002611159,0.000114728275,0.00023686026,0.000054999782,0.000015784966],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012106677,0.00020170465,0.0004542972,0.00026973026,0.00007080004,0.000009722434,0.00017313787,0.00040750252,0.00009500733],"category_scores_gemma":[0.00032817948,0.00017505948,0.000059021997,0.00031730565,0.00059753866,0.00005942213,0.00015355501,0.00027134182,0.000033351385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014956457,0.000068228444,0.0044504646,0.000009845271,0.00005248395,0.0000057249163,0.00041096646,0.0000011591402,0.9634199,0.005625762,0.000041856172,0.025764044],"study_design_scores_gemma":[0.0016494117,0.0005211128,0.037095208,0.00003127202,0.00001936814,0.00003548373,0.00013361782,0.000056036984,0.9520451,0.004599116,0.0035727897,0.00024150393],"about_ca_topic_score_codex":0.00010151811,"about_ca_topic_score_gemma":0.000034456014,"teacher_disagreement_score":0.08329445,"about_ca_system_score_codex":0.00006730223,"about_ca_system_score_gemma":0.00003235244,"threshold_uncertainty_score":0.71387184},"labels":[],"label_agreement":null},{"id":"W2804446714","doi":"10.1007/7651_2018_116","title":"Isolation, Culture, and Motility Measurements of Epidermal Melanocytes from GFP-Expressing Reporter Mice","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"melanin and skin pigmentation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research; Ministère de l’Éducation, Gouvernement de l’Ontario; Ministry of Advanced Education and Skills Development","keywords":"Green fluorescent protein; Clonogenic assay; Motility; Reporter gene; Cell biology; Biology; Population; Molecular biology; Cell culture; Cell; Gene expression; Gene; Genetics; Medicine","score_opus":0.0444179559368584,"score_gpt":0.3945157158528751,"score_spread":0.3500977599160167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804446714","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48592737,0.0008933824,0.51215506,0.000017851811,0.00014058212,0.00009937661,0.000007332075,0.0000041262324,0.00075492257],"genre_scores_gemma":[0.44856116,0.000023731936,0.5510118,0.00017362149,0.00007637887,0.00000873143,0.00010431344,0.000009347248,0.000030905685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980013,0.00091451424,0.00040604736,0.00043078314,0.00007181927,0.00017553013],"domain_scores_gemma":[0.9993109,0.000035120236,0.00019370398,0.0002923542,0.00012526342,0.000042620377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009599711,0.00014055613,0.00022424564,0.000051528506,0.000041497307,0.000009137551,0.000116883035,0.0002288338,0.00002468346],"category_scores_gemma":[0.0005258156,0.00012874059,0.00005017114,0.00007514246,0.00021123204,0.000004547809,0.000104363826,0.00006304034,7.3097976e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055882865,0.000026260364,0.08109729,0.000008124825,0.000046208475,0.0000015460419,0.00013210504,0.0000021922901,0.9150572,0.000034728124,0.000043813838,0.003494679],"study_design_scores_gemma":[0.0004750956,0.00017321594,0.014371381,0.000014598739,0.00002126965,0.000007925883,0.00003851115,0.0001299859,0.98175526,0.0021447705,0.00075440126,0.00011357785],"about_ca_topic_score_codex":0.000096688935,"about_ca_topic_score_gemma":0.000025959127,"teacher_disagreement_score":0.06672591,"about_ca_system_score_codex":0.000010323519,"about_ca_system_score_gemma":0.000024400215,"threshold_uncertainty_score":0.5249889},"labels":[],"label_agreement":null},{"id":"W2804457431","doi":"10.1007/978-1-4939-7737-6_10","title":"Navigating Xenbase: An Integrated Xenopus Genomics and Gene Expression Database","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Ensembl; Xenopus; UniProt; Biology; Computational biology; Genome; Gene; Model organism; Gene nomenclature; Genomics; Database; Genetics; Computer science","score_opus":0.033943550442553094,"score_gpt":0.3812401770192344,"score_spread":0.3472966265766813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804457431","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62645,0.000045004384,0.3732658,0.000040885974,0.000030586172,0.000060886097,0.000011723032,0.000013929456,0.00008119186],"genre_scores_gemma":[0.22656177,0.000011945813,0.77290374,0.00040317807,0.000021875578,0.000011060275,0.00007566287,0.000005288068,0.0000054752145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866414,0.0005304052,0.00016799924,0.00039154847,0.00003874023,0.00020719176],"domain_scores_gemma":[0.9995792,0.00007814868,0.000045824767,0.00020241734,0.0000075886696,0.00008685142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004285446,0.00010869229,0.00013251249,0.000009868745,0.00007018391,0.000007799967,0.00017213658,0.000108423104,0.0002167615],"category_scores_gemma":[0.00022168568,0.00007828056,0.000018498058,0.00016452571,0.00046343976,0.000044056265,0.00031809782,0.0001937134,0.000015921389],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014461978,0.000040300434,0.0007868462,0.0000010284834,0.0000015209979,0.0000040493524,0.0000519397,0.000013160362,0.9563351,0.000057452908,0.0000056102385,0.04268852],"study_design_scores_gemma":[0.00012858259,0.00015315774,0.0006814455,0.000007932291,0.0000030673234,0.000005184278,0.00003199624,0.0020711357,0.98854935,0.007228397,0.0010196844,0.00012003837],"about_ca_topic_score_codex":0.00018002087,"about_ca_topic_score_gemma":0.000015698453,"teacher_disagreement_score":0.39988822,"about_ca_system_score_codex":0.000034587316,"about_ca_system_score_gemma":0.000004573324,"threshold_uncertainty_score":0.31921884},"labels":[],"label_agreement":null},{"id":"W2804628144","doi":"10.1007/978-1-4939-7834-2_6","title":"Transcript Profiling Using Long-Read Sequencing Technologies","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; McGill University and Génome Québec Innovation Centre; McGill Genome Centre","funders":"","keywords":"Nanopore sequencing; De novo transcriptome assembly; Computational biology; RNA-Seq; Transcriptome; Biology; DNA sequencing; Profiling (computer programming); Deep sequencing; Sequence assembly; RNA; Gene isoform; Gene; Genetics; Computer science; Genome; Gene expression","score_opus":0.05594956835399527,"score_gpt":0.42048215247975324,"score_spread":0.36453258412575795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804628144","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27397087,0.002209207,0.72268355,0.0000781756,0.00019482181,0.00016881201,0.000005027908,0.000035809793,0.0006537173],"genre_scores_gemma":[0.28160048,0.000117671036,0.71784604,0.0001769261,0.00008690031,0.00004823242,0.000025793384,0.000026223503,0.0000717792],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983391,0.00038893754,0.00029297706,0.00054503547,0.000051507457,0.00038241324],"domain_scores_gemma":[0.99921834,0.000015013598,0.00008483565,0.0005486562,0.00010190574,0.00003124686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071793597,0.00018654087,0.00021125052,0.00011804207,0.000085689455,0.000015249091,0.0003305638,0.00037415104,0.000017492242],"category_scores_gemma":[0.00025347114,0.00017715857,0.0000883335,0.00028905342,0.00040613383,0.0000034414115,0.0001072238,0.00016113173,0.0000032610033],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022452297,0.000015693231,0.0019264964,0.000008716011,0.000026352,0.000005044942,0.000026785116,0.00005937043,0.96767676,0.0012508554,0.0000054778416,0.02897597],"study_design_scores_gemma":[0.00025126516,0.0001857136,0.0000786418,0.000014587229,0.000014687526,0.000030529725,0.00017222311,0.0008884461,0.99187285,0.0025591997,0.003709205,0.00022267368],"about_ca_topic_score_codex":0.000048830927,"about_ca_topic_score_gemma":0.000031803265,"teacher_disagreement_score":0.028753296,"about_ca_system_score_codex":0.000058310434,"about_ca_system_score_gemma":0.00011955867,"threshold_uncertainty_score":0.72243166},"labels":[],"label_agreement":null},{"id":"W2804762321","doi":"10.1007/978-1-4939-7737-6_14","title":"Using WormBase: A Genome Biology Resource for Caenorhabditis elegans and Related Nematodes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"U.S. National Library of Medicine; National Human Genome Research Institute; Biotechnology and Biological Sciences Research Council; Medical Research Council","keywords":"Caenorhabditis elegans; Genome; Biology; Nematode; Resource (disambiguation); Computational biology; World Wide Web; Data science; Computer science; Gene; Genetics; Ecology","score_opus":0.02740759274454732,"score_gpt":0.37995193149185325,"score_spread":0.35254433874730595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804762321","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32731,0.0024564571,0.6691821,0.00013491319,0.00020667214,0.00035156804,0.000033528035,0.000019050769,0.00030571967],"genre_scores_gemma":[0.27230117,0.00013361953,0.72616297,0.0007291727,0.00022156362,0.000047856625,0.00018368413,0.00006994803,0.00015002432],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970928,0.0008863515,0.00047899957,0.00086040754,0.000048089674,0.0006333525],"domain_scores_gemma":[0.99894047,0.00008377079,0.00016354203,0.0005744724,0.0001185875,0.0001191337],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012736293,0.00032110716,0.00043828084,0.00019312551,0.0001559177,0.000023879464,0.00032594983,0.00062510866,0.00002626483],"category_scores_gemma":[0.00049526826,0.0003279902,0.00012313429,0.00019561098,0.0007169891,0.0000034624525,0.00028026846,0.0001863161,0.000002578189],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060908216,0.000035468318,0.001544247,0.000024551126,0.00008133001,0.000005976986,0.00024266048,0.00006375699,0.99295676,0.0019784668,0.000026501353,0.002979365],"study_design_scores_gemma":[0.0018772963,0.0016129924,0.00077683834,0.000025900457,0.00010919116,0.00026953017,0.00015943157,0.0023384413,0.9050476,0.024858786,0.062058996,0.0008649791],"about_ca_topic_score_codex":0.000078469275,"about_ca_topic_score_gemma":0.000058347956,"teacher_disagreement_score":0.08790915,"about_ca_system_score_codex":0.000028845165,"about_ca_system_score_gemma":0.00007978085,"threshold_uncertainty_score":0.9999172},"labels":[],"label_agreement":null},{"id":"W2804828868","doi":"10.1007/978-1-4939-7837-3_16","title":"Observing Frustrated Phagocytosis and Phagosome Formation and Closure Using Total Internal Reflection Fluorescence Microscopy (TIRFM)","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Agence Nationale de la Recherche","keywords":"Phagosome; Phagocytosis; Total internal reflection fluorescence microscope; Pseudopodia; Cell biology; Opsonin; Fluorescence microscope; Microscopy; Chemistry; Biophysics; Biology; Fluorescence; Optics; Physics; Actin","score_opus":0.04055077216792793,"score_gpt":0.40050900579714827,"score_spread":0.35995823362922036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2804828868","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75419295,0.003080392,0.24201058,0.000046899724,0.00041671394,0.00015790168,0.0000051436186,0.000026973858,0.000062447165],"genre_scores_gemma":[0.8101633,0.00013748747,0.18947735,0.00008663617,0.00003507399,0.000010591297,0.00003734841,0.00001553838,0.00003667233],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99774355,0.0011040476,0.00040212082,0.00039307564,0.000021016987,0.00033618184],"domain_scores_gemma":[0.99944633,0.00009077866,0.00017150045,0.00018616513,0.00008192661,0.000023267448],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007590207,0.00020415129,0.00031818412,0.00022012035,0.0001714737,0.00002977712,0.0001114495,0.00039251806,0.000042806296],"category_scores_gemma":[0.00016159871,0.00019257209,0.000046158904,0.00023671075,0.00039810283,0.00017853515,0.00015084395,0.00026712904,0.0000054455745],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001342567,0.000026338219,0.006388422,0.00001682852,0.000046711066,0.0000012662406,0.0002890855,0.0000020893642,0.9654087,0.00027099418,0.0000063445286,0.027408963],"study_design_scores_gemma":[0.0009957735,0.00033998946,0.0076949755,0.000073093484,0.000035639318,0.00030927244,0.0001034995,0.0014082582,0.98744994,0.0009840948,0.00041000574,0.00019545385],"about_ca_topic_score_codex":0.00018915156,"about_ca_topic_score_gemma":0.000014955134,"teacher_disagreement_score":0.055970352,"about_ca_system_score_codex":0.00007155802,"about_ca_system_score_gemma":0.000025774532,"threshold_uncertainty_score":0.7852862},"labels":[],"label_agreement":null},{"id":"W2805215782","doi":"10.1007/978-1-4939-7804-5_17","title":"Evaluating Programs for Predicting Genes and Transcripts with RNA-Seq Support in Fungal Genomes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Génome Québec; Genome Canada","keywords":"RNA-Seq; Gene; Genome; Computational biology; Biology; RNA; Gene prediction; Genetics; Set (abstract data type); Transcriptome; Gene expression; Computer science; Programming language","score_opus":0.058262620148748064,"score_gpt":0.40706365954627083,"score_spread":0.34880103939752277,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805215782","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8382575,0.004806189,0.15591088,0.00006838616,0.00012572981,0.00058545446,0.000011571325,0.000004496681,0.00022981974],"genre_scores_gemma":[0.45321667,0.00017499448,0.5460807,0.00013606138,0.000110582296,0.0002009587,0.00002548049,0.000026163581,0.000028380877],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982588,0.00036296606,0.00031331723,0.00058308506,0.00005213234,0.0004296563],"domain_scores_gemma":[0.99948716,0.000048501854,0.00008440455,0.00023261676,0.000095611955,0.000051706353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00134561,0.00021119116,0.00029169515,0.00008882518,0.000072151735,0.000015009359,0.00015375779,0.00019035501,0.0000026950383],"category_scores_gemma":[0.00012851892,0.00018359629,0.000055660294,0.00012065815,0.00028631926,9.32628e-7,0.000103037964,0.00008595417,2.2903718e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014163325,0.000029096636,0.081329525,0.000023052778,0.000056646983,0.000003060646,0.0002142144,0.00002129561,0.7911492,0.00008787068,0.0000016709824,0.12694275],"study_design_scores_gemma":[0.0030936766,0.006889106,0.01264408,0.000032633416,0.00007503507,0.000069481684,0.00041178142,0.001290252,0.96392286,0.0026614307,0.008309214,0.00060047803],"about_ca_topic_score_codex":0.000037134843,"about_ca_topic_score_gemma":0.00024394639,"teacher_disagreement_score":0.39016983,"about_ca_system_score_codex":0.000012516455,"about_ca_system_score_gemma":0.00007542112,"threshold_uncertainty_score":0.7486839},"labels":[],"label_agreement":null},{"id":"W2805298028","doi":"10.1007/978-1-4939-7804-5_2","title":"Fungal Genomic DNA Extraction Methods for Rapid Genotyping and Genome Sequencing","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Génome Québec; Genome Canada","keywords":"DNA extraction; genomic DNA; Genotyping; Biology; Polymerase chain reaction; DNA; Digital polymerase chain reaction; Multiple displacement amplification; Genome; DNA microarray; Molecular biology; Chromatography; Chemistry; Gene; Genetics; Genotype","score_opus":0.031609897632350586,"score_gpt":0.39291549819498744,"score_spread":0.36130560056263683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805298028","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20121007,0.0056950497,0.7920558,0.000028081191,0.00025614127,0.0003273604,0.00009648646,0.000015485895,0.0003155268],"genre_scores_gemma":[0.038677074,0.000358144,0.95972204,0.00054298516,0.00033353354,0.00009232117,0.00018230548,0.000041257852,0.000050320756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974189,0.0010579142,0.00033966114,0.0006907038,0.000034343597,0.0004584877],"domain_scores_gemma":[0.9992038,0.00013429832,0.00012256001,0.0003412051,0.0000879391,0.000110222754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017833236,0.00024399221,0.00030792932,0.00014875624,0.00012799044,0.000023093044,0.0001902274,0.00033292855,0.00001937235],"category_scores_gemma":[0.00056980975,0.0002440794,0.00012588025,0.000117055584,0.00021028002,0.0000050377944,0.00016012069,0.000119300305,0.0000023974742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014703283,0.000017598299,0.00040231703,0.000023365255,0.00005938952,0.000005817729,0.00003355257,0.000013178798,0.9437997,0.00042518086,0.0000062828685,0.055066608],"study_design_scores_gemma":[0.00065321464,0.00067838177,0.004081007,0.000011820545,0.000066523295,0.00010981737,0.00006317126,0.0011820331,0.9549052,0.002379199,0.03542568,0.0004439197],"about_ca_topic_score_codex":0.000012253196,"about_ca_topic_score_gemma":0.000009555779,"teacher_disagreement_score":0.16766626,"about_ca_system_score_codex":0.000044692093,"about_ca_system_score_gemma":0.00009323493,"threshold_uncertainty_score":0.99532694},"labels":[],"label_agreement":null},{"id":"W2805342610","doi":"10.1007/978-1-4939-7804-5_1","title":"Introduction: Overview of Fungal Genomics","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Genomics; Computational biology; Genome; Comparative genomics; Biology; Proteomics; Genetics; Gene","score_opus":0.0281281502480006,"score_gpt":0.3685710574810612,"score_spread":0.34044290723306064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805342610","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33613682,0.008889356,0.6515349,0.0002223845,0.0007643681,0.00023632147,0.00021239264,0.000013760973,0.001989694],"genre_scores_gemma":[0.082038485,0.001070116,0.9139837,0.000804661,0.0015013156,0.000033425444,0.00028650742,0.000041435895,0.00024034371],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985451,0.00051191146,0.0002786233,0.00039022093,0.000042082815,0.00023203852],"domain_scores_gemma":[0.99934566,0.000019488558,0.00009162458,0.00040578036,0.00008482354,0.000052595875],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057239505,0.00013923334,0.00023128293,0.000081552564,0.000026763257,0.000004215596,0.00020388857,0.00018901541,0.00008332137],"category_scores_gemma":[0.00029283835,0.00013327244,0.000105886174,0.00015932396,0.00023669092,0.0000014883884,0.00014407928,0.000073243755,0.000007940318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000810054,0.00004845178,0.0028846997,0.000016283195,0.000035869107,0.000005282365,0.000009706927,0.000007859002,0.9860973,0.0025328062,0.0003057728,0.007974975],"study_design_scores_gemma":[0.00027377417,0.00044284112,0.0027211255,0.0000066238536,0.000021041993,0.000040782343,0.000014095398,0.000046112542,0.8790447,0.0012608615,0.115954414,0.00017362372],"about_ca_topic_score_codex":0.000008268136,"about_ca_topic_score_gemma":0.000009485764,"teacher_disagreement_score":0.26244882,"about_ca_system_score_codex":0.000011216242,"about_ca_system_score_gemma":0.000059642225,"threshold_uncertainty_score":0.5434692},"labels":[],"label_agreement":null},{"id":"W2805397901","doi":"10.1007/978-1-4939-7804-5_12","title":"Evolutionary Adaptation to Generate Mutants","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Adaptability; Adaptation (eye); Mutagenesis; Mutant; Biology; Strain (injury); Computational biology; Biological system; Biochemical engineering; Genetics; Gene; Ecology; Engineering","score_opus":0.02960198028514918,"score_gpt":0.37014593392866024,"score_spread":0.3405439536435111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805397901","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24073677,0.00029812902,0.757532,0.00011549019,0.00028231167,0.00017412586,0.000018564355,0.00000896025,0.0008336759],"genre_scores_gemma":[0.29083565,0.000017769346,0.7073985,0.0013210385,0.00017403852,0.00002426093,0.00006829473,0.000012019624,0.00014846421],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845237,0.0006259861,0.0001689757,0.00042469936,0.00004905546,0.00027892945],"domain_scores_gemma":[0.9994693,0.000015059077,0.000042659292,0.00030018674,0.00009518708,0.00007759806],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000509001,0.00013043577,0.00013764245,0.00010552376,0.00006967641,0.000006869078,0.00024183272,0.00021575818,0.00004586733],"category_scores_gemma":[0.0002724999,0.00013892223,0.000054989137,0.00021306386,0.00013711253,0.0000018778525,0.00021166765,0.00007770692,0.000051058534],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092366034,0.00002743718,0.0037323039,0.0000026607659,0.00002309105,0.0000075095118,0.00007571262,0.00009864983,0.9816722,0.0010162423,0.00019276596,0.013059006],"study_design_scores_gemma":[0.00040587803,0.0007154617,0.006428987,0.0000061298574,0.000009742447,0.000019346431,0.000045544577,0.0004867916,0.96467024,0.00463142,0.0223118,0.00026866831],"about_ca_topic_score_codex":0.000046572513,"about_ca_topic_score_gemma":0.000033639302,"teacher_disagreement_score":0.0501335,"about_ca_system_score_codex":0.000021723516,"about_ca_system_score_gemma":0.000057759065,"threshold_uncertainty_score":0.5665084},"labels":[],"label_agreement":null},{"id":"W2805618133","doi":"10.1007/978-1-4939-7877-9_4","title":"Isolation and Screening of Cellulose-Degrading Microorganisms from Different Ecological Niches","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"","keywords":"Microorganism; Cellulose; Isolation (microbiology); Ecological niche; Biology; Ecology; Chemistry; Bacteria; Microbiology; Biochemistry; Habitat","score_opus":0.022747756291585826,"score_gpt":0.30577101006426916,"score_spread":0.28302325377268334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805618133","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44807884,0.00032126173,0.5512605,0.00003792099,0.00017304345,0.00004282062,0.0000013697827,0.000025987487,0.000058266225],"genre_scores_gemma":[0.5165142,0.000025754915,0.48338062,0.000029670802,0.000032339445,0.0000013719186,0.0000052102514,0.0000060458124,0.000004821543],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992614,0.00024169305,0.00016847883,0.00018493501,0.000023291797,0.00012021637],"domain_scores_gemma":[0.9997572,0.00007340233,0.00002999029,0.000100516896,0.000013818115,0.000025131298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025600038,0.000092730355,0.00016664344,0.00008145282,0.000017955383,0.0000047886538,0.00006521722,0.00017621525,0.00006992562],"category_scores_gemma":[0.000052116247,0.00007759186,0.00002662924,0.00007685893,0.00012554387,0.000014695669,0.000051567513,0.00011095812,0.000001854589],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008084909,0.000009794752,0.0062138974,0.000011800021,0.000013613693,6.876955e-7,0.00007485691,0.0000052953155,0.9804929,0.00013593349,0.000007805825,0.013025352],"study_design_scores_gemma":[0.00019226558,0.00009244278,0.008525375,0.0000073977653,0.000008700868,0.0000018247779,0.000040390536,0.007681007,0.9800727,0.0028189295,0.00046968114,0.00008928448],"about_ca_topic_score_codex":0.000018326271,"about_ca_topic_score_gemma":0.0000027290876,"teacher_disagreement_score":0.06843533,"about_ca_system_score_codex":0.000015372327,"about_ca_system_score_gemma":0.0000018872488,"threshold_uncertainty_score":0.31641042},"labels":[],"label_agreement":null},{"id":"W2805621976","doi":"10.1007/978-1-4939-7831-1_19","title":"The Importance of Calcium Ions for Determining Mitochondrial Glycerol-3-Phosphate Dehydrogenase Activity When Measuring Uncoupling Protein 1 (UCP1) Function in Mitochondria Isolated from Brown Adipose Tissue","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Glycerol-3-phosphate dehydrogenase; Calcium; Mitochondrion; Biology; Dehydrogenase; Biochemistry; Brown adipose tissue; Cytosol; Adipose tissue; Inner mitochondrial membrane; Enzyme; Chemistry","score_opus":0.044601432765377265,"score_gpt":0.368653754293655,"score_spread":0.32405232152827773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805621976","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5118726,0.0019904857,0.48416522,0.00011704562,0.0006600594,0.0011343689,0.000011710598,0.000024098781,0.00002443238],"genre_scores_gemma":[0.44436842,0.000023068063,0.55435544,0.00016258466,0.00045925155,0.0004317216,0.000032387576,0.000063453874,0.00010367614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971783,0.00070772145,0.00072593795,0.00066048617,0.00014000072,0.00058754534],"domain_scores_gemma":[0.9982057,0.0004732222,0.00036021072,0.0006499208,0.0001850635,0.00012586844],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011820868,0.00030178227,0.00073169754,0.00020041082,0.0001393615,0.000014705994,0.0002364239,0.0004135385,0.000029299896],"category_scores_gemma":[0.0016631307,0.00024576488,0.00015164806,0.0003072261,0.000267396,0.00007264316,0.00010803692,0.00040507942,0.0000035196977],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0024134663,0.000082657694,0.002494512,0.000027371263,0.0001375883,0.000029045146,0.00035005505,0.000014702521,0.956022,0.00015042859,0.000008159513,0.038270015],"study_design_scores_gemma":[0.003277493,0.0009132741,0.0015823259,0.00016528662,0.00022188277,0.000013509521,0.00004208506,0.0043879957,0.97884095,0.0062166913,0.0040912344,0.0002472532],"about_ca_topic_score_codex":0.0005300999,"about_ca_topic_score_gemma":0.0008288478,"teacher_disagreement_score":0.07019021,"about_ca_system_score_codex":0.00009222911,"about_ca_system_score_gemma":0.00017655863,"threshold_uncertainty_score":0.99999946},"labels":[],"label_agreement":null},{"id":"W2805956328","doi":"10.1007/978-1-4939-8546-3_7","title":"Application of High-Throughput Next-Generation Sequencing for HLA Typing on Buccal Extracted DNA","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Buccal swab; Genotyping; Typing; Buccal administration; DNA sequencing; Human leukocyte antigen; Biology; Throughput; Computational biology; DNA; Computer science; Genetics; Bioinformatics; Genotype; Gene; Antigen","score_opus":0.09543488181223236,"score_gpt":0.4201256793895099,"score_spread":0.32469079757727753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2805956328","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24053392,0.000042010004,0.7582982,0.00016353806,0.00015690867,0.00053950935,0.000004936548,0.000020828767,0.00024012492],"genre_scores_gemma":[0.44039154,0.000006855916,0.55906403,0.0002274129,0.0001069852,0.00007255489,0.000107692955,0.000014151242,0.000008754597],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998638,0.00038083183,0.00040178726,0.00033040196,0.0000622097,0.0001867862],"domain_scores_gemma":[0.9991463,0.00028232933,0.00012896598,0.00026907038,0.0001367256,0.000036636127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097179686,0.000118437965,0.00030361145,0.00015651714,0.000032071694,0.0000040274213,0.00006665218,0.00023588129,0.000016211528],"category_scores_gemma":[0.0003402606,0.00011124586,0.000057105197,0.00020561989,0.00010211072,0.000022647893,0.000009800267,0.00010605789,0.000005449148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011891223,0.00003672648,0.00029224533,0.00008525285,0.000021960472,0.0000019475751,0.00018722276,0.000025264282,0.9557488,0.012611826,0.000004023944,0.030865848],"study_design_scores_gemma":[0.0009123216,0.00049136835,0.0006149741,0.000064078646,0.000051223808,0.000022289574,0.00003602667,0.013727553,0.9802744,0.0033573087,0.00035257934,0.000095888325],"about_ca_topic_score_codex":0.00007181962,"about_ca_topic_score_gemma":0.0000131667,"teacher_disagreement_score":0.19985762,"about_ca_system_score_codex":0.00009214674,"about_ca_system_score_gemma":0.00006769031,"threshold_uncertainty_score":0.45364746},"labels":[],"label_agreement":null},{"id":"W2806047468","doi":"10.1007/978-1-4939-7804-5_21","title":"Phylogenetic Analysis of Protein Family","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Phylogenetic tree; Evolutionary biology; Similarity (geometry); Computational biology; Biology; Phylogenetic network; Genome; Phylogenetic relationship; Protein family; Phylogenetics; Function (biology); Genetics; Computer science; Gene; Artificial intelligence; Image (mathematics)","score_opus":0.02151813376415647,"score_gpt":0.36727424913393875,"score_spread":0.3457561153697823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806047468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6979134,0.0022742318,0.2983514,0.000022693854,0.00008320499,0.00016797731,0.000016532278,0.000001943311,0.001168608],"genre_scores_gemma":[0.63885486,0.00006501232,0.36074802,0.0001670907,0.000047962007,0.000035391004,0.000018928586,0.000013895624,0.000048813145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823034,0.0005563328,0.00037562125,0.00048182206,0.000055729597,0.0003001356],"domain_scores_gemma":[0.9991398,0.000026001535,0.00012816214,0.0005330085,0.0001286434,0.00004442056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069572194,0.0001808648,0.00041576053,0.00028840348,0.000033234923,0.0000042283677,0.00029494558,0.00021020592,0.00001559248],"category_scores_gemma":[0.00019469252,0.0001718883,0.00019631104,0.0006502584,0.00038612194,2.1891692e-7,0.000225618,0.000066666216,0.0000020318066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039730257,0.000041202595,0.012701236,0.0000054313923,0.0005980592,0.0000012815116,0.000043781118,0.00007416072,0.97706467,0.0007176202,0.0000059540885,0.0087068835],"study_design_scores_gemma":[0.00030791998,0.000609698,0.030448124,0.000004116896,0.00018141698,0.0000011983168,0.000040901632,0.00020189931,0.9602971,0.001790741,0.005904198,0.00021270328],"about_ca_topic_score_codex":0.000058889782,"about_ca_topic_score_gemma":0.000060558,"teacher_disagreement_score":0.062396634,"about_ca_system_score_codex":0.000008760625,"about_ca_system_score_gemma":0.00004415952,"threshold_uncertainty_score":0.70094013},"labels":[],"label_agreement":null},{"id":"W2806213267","doi":"10.1007/978-1-4939-7871-7_6","title":"A Bacterial Adenylate Cyclase-Based Two-Hybrid System Compatible with Gateway® Cloning","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centre National de la Recherche Scientifique; Institut national de la recherche scientifique; National Institute of General Medical Sciences; University of South Dakota; University of Nebraska Medical Center","keywords":"Adenylate kinase; Cyclase; Operon; Adenylate Cyclase Toxin; lac operon; Gene; Bordetella pertussis; Cloning (programming); Biology; Biochemistry; Cell biology; Gateway (web page); Chemistry; G protein; Escherichia coli; Genetics; Pertussis toxin; Bacteria; Enzyme; Signal transduction; Computer science","score_opus":0.012566491211831657,"score_gpt":0.3247195395860345,"score_spread":0.3121530483742028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806213267","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5967682,0.00017227404,0.40163603,0.000101033445,0.0004905198,0.00026663925,0.000026444972,0.000044737415,0.0004941253],"genre_scores_gemma":[0.6119185,0.000008408274,0.38729304,0.0002253179,0.0002825552,0.00004558694,0.000161816,0.00004304873,0.000021739259],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997013,0.00095976103,0.00045042508,0.00084590033,0.00008365616,0.0006472749],"domain_scores_gemma":[0.9987777,0.000034448756,0.0001976721,0.00074305397,0.00013965051,0.000107462845],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00080023345,0.0003696479,0.00047602563,0.00020165986,0.00010339973,0.000038463604,0.00045915114,0.0004440138,0.00004252794],"category_scores_gemma":[0.000098368895,0.00031684048,0.00010450308,0.00027778622,0.00056450756,0.0000025156592,0.00023220225,0.00023527614,0.0000141362625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000507428,0.000051346567,0.0009514813,0.000024254137,0.00006478938,0.000038153543,0.000010200976,0.000072049916,0.9938673,0.0006704741,0.000024321422,0.003718236],"study_design_scores_gemma":[0.0019726707,0.0018483412,0.0001691282,0.000046993224,0.000031849333,0.0001009149,0.000022188484,0.0009223081,0.9798833,0.00015735318,0.014426749,0.0004181829],"about_ca_topic_score_codex":0.00009336752,"about_ca_topic_score_gemma":0.00010256881,"teacher_disagreement_score":0.015150276,"about_ca_system_score_codex":0.000042499818,"about_ca_system_score_gemma":0.00015427054,"threshold_uncertainty_score":0.99992836},"labels":[],"label_agreement":null},{"id":"W2806546282","doi":"10.1007/978-1-4939-7804-5_9","title":"Mass Spectrometry-Based Proteomics","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Génome Québec; Genome Canada","keywords":"Proteomics; Bottom-up proteomics; Mass spectrometry; Chemistry; Chromatography; Quantitative proteomics; Proteolytic enzymes; Protein mass spectrometry; Computational biology; Tandem mass spectrometry; Biology; Biochemistry; Enzyme","score_opus":0.019603802914482264,"score_gpt":0.4029376064021088,"score_spread":0.3833338034876265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806546282","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007999469,0.000052082276,0.97972846,0.00022986201,0.000028029182,0.00017648622,0.000010205821,0.000111100926,0.011664291],"genre_scores_gemma":[0.007820784,0.0000069516445,0.9913907,0.00029671617,0.00007261589,0.00027595653,0.000017612118,0.000026618578,0.00009203281],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989694,0.000108655935,0.000231277,0.0003670216,0.000038137296,0.0002855598],"domain_scores_gemma":[0.9992454,0.00007468963,0.000089077,0.0005027353,0.000044751763,0.00004331998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040806766,0.00013888895,0.00019179781,0.0001028398,0.000045816945,0.000008304761,0.00030082988,0.00022605892,0.0003131156],"category_scores_gemma":[0.00018280314,0.00013875708,0.00006302685,0.00027466286,0.00021307335,0.000011331405,0.00006084956,0.00025060214,0.000012832722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013994976,0.000023922206,0.0005210945,0.000008854641,0.0000054517254,0.0000028311576,0.000005199041,0.000006488535,0.9741557,0.022619357,0.0000051948386,0.0026318815],"study_design_scores_gemma":[0.00017568664,0.00003697578,0.0000041214403,0.00000714911,0.000003825152,0.0000025533236,0.0000040449145,0.00079640414,0.8343017,0.16095181,0.0035817716,0.0001339756],"about_ca_topic_score_codex":0.000011485695,"about_ca_topic_score_gemma":0.0000016686611,"teacher_disagreement_score":0.13985404,"about_ca_system_score_codex":0.000071804265,"about_ca_system_score_gemma":0.0000362522,"threshold_uncertainty_score":0.56583494},"labels":[],"label_agreement":null},{"id":"W2806706630","doi":"10.1007/978-1-4939-7871-7_7","title":"Analyses of Protein Interaction Networks Using Computational Tools","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Computer science; Key (lock); Reliability (semiconductor); Interaction network; Protein–protein interaction; Data science; Chemistry; Computer security","score_opus":0.06503611905120012,"score_gpt":0.44567763255833426,"score_spread":0.38064151350713415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806706630","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11629059,0.0003499467,0.8825271,0.000015641164,0.00015839486,0.00016017076,0.0000044925996,0.000003988179,0.0004896821],"genre_scores_gemma":[0.3797008,0.0000062194117,0.6199723,0.0001318334,0.000100785495,0.0000072129774,0.000060814364,0.000009404336,0.000010603322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872285,0.00039706606,0.00040140224,0.00022785371,0.000042823758,0.00020798751],"domain_scores_gemma":[0.9993887,0.000034407487,0.00020085256,0.0002313045,0.00011111878,0.000033634304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063500565,0.00012920324,0.0002131717,0.000098404045,0.00003401118,0.000011355865,0.00016004585,0.00023063728,0.000020485102],"category_scores_gemma":[0.00013090804,0.00012259024,0.00008913257,0.00017631259,0.00020245239,0.0000038972476,0.00013213472,0.00011382217,0.0000011029143],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059822316,0.000024641393,0.00019999595,0.0000074486306,0.00005894852,7.825307e-7,0.000017949442,0.022879273,0.95498294,0.0011618795,0.000012127048,0.020594219],"study_design_scores_gemma":[0.0005915734,0.00054607977,0.00023406679,0.00004069987,0.00002959191,0.000029693965,0.000053948042,0.23852322,0.7467041,0.011034546,0.0019207106,0.00029180088],"about_ca_topic_score_codex":0.000028923872,"about_ca_topic_score_gemma":0.0000081815115,"teacher_disagreement_score":0.2634102,"about_ca_system_score_codex":0.000015898602,"about_ca_system_score_gemma":0.00004481919,"threshold_uncertainty_score":0.49990848},"labels":[],"label_agreement":null},{"id":"W2806792322","doi":"10.1007/978-1-4939-7825-0_25","title":"Methods to Quantify Cell Signaling and GPCR Receptor Ligand Bias: Characterization of Drugs that Target the Endocannabinoid Receptors in Huntington’s Disease","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cannabis and Cannabinoid Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Dalhousie University","funders":"King Abdulaziz University; Canadian Institutes of Health Research; Dalhousie University","keywords":"Endocannabinoid system; G protein-coupled receptor; Receptor; Cannabinoid receptor; Neuroscience; Disease; Cell; Biology; Cell biology; Pharmacology; Chemistry; Medicine; Biochemistry; Internal medicine; Antagonist","score_opus":0.032900220174128254,"score_gpt":0.3956692540597801,"score_spread":0.36276903388565185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806792322","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7852628,0.0005753705,0.20754053,0.0052291625,0.00036325122,0.0008485957,0.000016159658,0.000017380953,0.00014670499],"genre_scores_gemma":[0.21043772,0.00021226639,0.78580356,0.0018279988,0.00022339461,0.0002694633,0.000085757994,0.00007922796,0.0010606041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995071,0.0030540002,0.00056214153,0.00059558684,0.00019536098,0.0005218904],"domain_scores_gemma":[0.99873805,0.00017520957,0.0001856226,0.00047671775,0.00019534618,0.00022904148],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005600213,0.00024482678,0.000579635,0.00053305057,0.000072361094,0.0000257852,0.00024153595,0.00019757864,0.00011753053],"category_scores_gemma":[0.001888079,0.00018161064,0.000114454175,0.00086739013,0.00041600477,0.000040782834,0.00023552583,0.00038449443,0.0000040523596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034923424,0.0000936937,0.02306086,0.000112701746,0.000018761488,0.000004438184,0.0013775645,0.0000031438665,0.9439311,0.0002077148,0.0001185846,0.030722184],"study_design_scores_gemma":[0.00070674665,0.00041164612,0.01050344,0.00009484657,0.000026910333,0.0000021635658,0.0004207422,0.00022686532,0.9518037,0.00049809803,0.035118125,0.00018675777],"about_ca_topic_score_codex":0.00016703657,"about_ca_topic_score_gemma":0.000007807978,"teacher_disagreement_score":0.57826304,"about_ca_system_score_codex":0.00007727786,"about_ca_system_score_gemma":0.00018814337,"threshold_uncertainty_score":0.74058664},"labels":[],"label_agreement":null},{"id":"W2806993897","doi":"10.1007/978-1-4939-7877-9_13","title":"Endoglucanase (EG) Activity Assays","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; NOSM University; Lakehead University","funders":"","keywords":"Cellulase; Cellulose; Cellulosic ethanol; Chemistry; Hydrolysis; Biochemistry; Polysaccharide; Biomass (ecology); Enzymatic hydrolysis; Biofuel; Biotechnology; Biology","score_opus":0.02405594355904083,"score_gpt":0.3529654378191723,"score_spread":0.32890949426013144,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2806993897","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06828173,0.00022995747,0.9236136,0.00020496653,0.0011665627,0.000101348145,0.0000027355782,0.00013533732,0.0062637785],"genre_scores_gemma":[0.38009238,0.00004203261,0.6193186,0.0002556486,0.00016696448,0.000011988122,0.0000044245658,0.000019568699,0.00008837328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990531,0.00037700761,0.000107029045,0.00021417282,0.000031966356,0.00021671708],"domain_scores_gemma":[0.99965376,0.00003466917,0.000016219721,0.00023059132,0.000021015281,0.000043774886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059455645,0.000106462205,0.00013813718,0.00011949232,0.000024711526,0.0000056414674,0.000112429225,0.00017245332,0.00016070023],"category_scores_gemma":[0.00009700521,0.00009971025,0.00004157308,0.00019702954,0.0001223894,0.000023594557,0.00004375971,0.0001764977,0.000045995454],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007814561,0.000011313732,0.00021856901,0.000013846279,0.000011002217,0.0000048343386,0.000023187406,0.000011650579,0.93617576,0.00030335342,0.0001663924,0.06305226],"study_design_scores_gemma":[0.00018103434,0.000059787264,0.00028172642,0.0000027691954,0.0000040843815,0.000008440642,0.000008622051,0.0026782502,0.9363247,0.0015978107,0.058728844,0.0001239407],"about_ca_topic_score_codex":0.000035191784,"about_ca_topic_score_gemma":0.0000068845843,"teacher_disagreement_score":0.31181067,"about_ca_system_score_codex":0.000043638272,"about_ca_system_score_gemma":0.000009531643,"threshold_uncertainty_score":0.40660658},"labels":[],"label_agreement":null},{"id":"W2807027458","doi":"10.1007/978-1-4939-7877-9_18","title":"Purification and Characterization of the Total Cellulase Activities (TCA) of Cellulolytic Microorganisms","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"","keywords":"Cellulase; Cellulose; Microorganism; Chemistry; Biomass (ecology); Polysaccharide; Filter paper; Food science; Hydrolysis; Biochemistry; Microbiology; Bacteria; Biology; Chromatography; Agronomy","score_opus":0.009930677947472401,"score_gpt":0.2675524719048866,"score_spread":0.25762179395741425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807027458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7531083,0.000072173556,0.24633361,0.00005539145,0.0002754001,0.00008169708,0.0000031081906,0.000009949912,0.000060350954],"genre_scores_gemma":[0.9532407,0.000027528324,0.046633262,0.00001449448,0.000023459808,0.000002392422,0.000006172453,0.0000072461667,0.000044727007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99948645,0.00018003125,0.00014096904,0.0000999509,0.000024333347,0.00006828564],"domain_scores_gemma":[0.9997611,0.000015779713,0.000050317733,0.00014300624,0.000019839135,0.000009978853],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022884479,0.000058640944,0.000100341655,0.00005965707,0.000014002126,0.0000021544333,0.000058778664,0.000093812385,0.000015307482],"category_scores_gemma":[0.000021958938,0.000046209607,0.00002157164,0.00012433465,0.00019160719,0.000018032759,0.000030400473,0.000058790363,5.265279e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005085794,0.000009044149,0.00020875275,0.000055189666,0.000005853996,6.915859e-8,0.00015238454,0.0000037131351,0.995197,0.0001741479,8.5391565e-7,0.004187888],"study_design_scores_gemma":[0.000094912306,0.000036078774,0.0043077013,0.000006968869,0.0000061548876,0.0000032584862,0.000037435842,0.0009873793,0.99404246,0.00019463702,0.00023712352,0.000045898872],"about_ca_topic_score_codex":0.000003217739,"about_ca_topic_score_gemma":1.5428384e-7,"teacher_disagreement_score":0.2001324,"about_ca_system_score_codex":0.000010200083,"about_ca_system_score_gemma":0.0000062170348,"threshold_uncertainty_score":0.18843731},"labels":[],"label_agreement":null},{"id":"W2807099876","doi":"10.1007/978-1-4939-7804-5_16","title":"Manual Gene Curation and Functional Annotation","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"Génome Québec; Genome Canada","keywords":"Annotation; Sequence (biology); Computer science; Computational biology; Gene prediction; Set (abstract data type); Gene Annotation; Similarity (geometry); Genome project; Gene; Genome; Data mining; Biology; Artificial intelligence; Genetics; Image (mathematics); Programming language","score_opus":0.02275600658943236,"score_gpt":0.37008120012067786,"score_spread":0.34732519353124547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807099876","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48659468,0.0008971893,0.5117577,0.0000904164,0.00018971114,0.00007819072,0.000005081609,0.0000019653717,0.00038506946],"genre_scores_gemma":[0.5240378,0.00014905837,0.47495878,0.0004429231,0.00023558394,0.00002764736,0.00005838505,0.000012532162,0.00007728029],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990217,0.0002831162,0.00016632782,0.00033097775,0.000031978314,0.00016586592],"domain_scores_gemma":[0.9996685,0.000020567388,0.000048550413,0.00015813306,0.00007399542,0.00003025619],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042152856,0.00011045896,0.00011403991,0.0000604924,0.00005915217,0.000008122005,0.00005677835,0.00013808203,0.000009232088],"category_scores_gemma":[0.00012845822,0.000108074186,0.000030445426,0.00007344082,0.00018708363,7.458354e-7,0.00010394792,0.00004985611,0.0000028300285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003891004,0.000012742058,0.0042778,0.0000023464752,0.000024907755,8.370525e-7,0.000039481805,0.000013226622,0.98103815,0.0015586565,0.000037539518,0.0129553955],"study_design_scores_gemma":[0.00046262934,0.0004569266,0.027733767,0.000002104929,0.000011724364,0.000023088016,0.000039132286,0.0002031076,0.94904464,0.008907168,0.012932413,0.00018327704],"about_ca_topic_score_codex":0.000011875745,"about_ca_topic_score_gemma":0.000021267846,"teacher_disagreement_score":0.03744312,"about_ca_system_score_codex":0.0000071986587,"about_ca_system_score_gemma":0.000022177579,"threshold_uncertainty_score":0.44071373},"labels":[],"label_agreement":null},{"id":"W2807196946","doi":"10.1007/978-1-4939-7877-9_14","title":"Cellobiohydrolase (CBH) Activity Assays","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lakehead University","funders":"","keywords":"Cellobiose; Chemistry; Cellulase; Cellulose; Hydrolysate; Substrate (aquarium); Hydrolysis; Carboxymethyl cellulose; Biochemistry; Cellulosic ethanol; Glycosidic bond; Chromatography; Biomass (ecology); Enzyme; Glycoside hydrolase; Organic chemistry; Biology","score_opus":0.01862707949293546,"score_gpt":0.34058301710033584,"score_spread":0.3219559376074004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807196946","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11170432,0.00019408666,0.880599,0.00016025346,0.0011894782,0.00010446423,0.000002630705,0.00015584145,0.005889925],"genre_scores_gemma":[0.49181473,0.000035936573,0.507667,0.0002026758,0.0001466333,0.000008937886,0.0000047286003,0.00002107315,0.00009829738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99900246,0.0003801165,0.00011808249,0.00023789179,0.000032761985,0.0002286736],"domain_scores_gemma":[0.99963677,0.000030509507,0.000018365792,0.0002487218,0.00002086783,0.000044744807],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006232255,0.000119315235,0.00014786664,0.00012847061,0.000026741573,0.0000067583105,0.00012424268,0.00021618317,0.00015590219],"category_scores_gemma":[0.000063158375,0.000111856105,0.00004803662,0.00022126372,0.00013828934,0.000025957796,0.000051265313,0.00018844349,0.00007902941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000952885,0.000015065279,0.00016524285,0.000016224893,0.000010508392,0.000004227237,0.000026603342,0.00002135165,0.96597767,0.00014022554,0.0001497388,0.03346363],"study_design_scores_gemma":[0.00018415172,0.000068461835,0.00012417075,0.000002917738,0.000004405058,0.000007113939,0.0000067100495,0.005547001,0.9404775,0.0014950539,0.051947463,0.00013508665],"about_ca_topic_score_codex":0.000019196039,"about_ca_topic_score_gemma":0.0000025713166,"teacher_disagreement_score":0.3801104,"about_ca_system_score_codex":0.00004537287,"about_ca_system_score_gemma":0.0000077179775,"threshold_uncertainty_score":0.45613596},"labels":[],"label_agreement":null},{"id":"W2807407433","doi":"10.1007/978-1-4939-7893-9_9","title":"TMV Disk Scaffolds for Making sub-30 nm Silver Nanorings","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Silver nanoparticle; Materials science; Tobacco mosaic virus; Nanotechnology; Nanoparticle; Biomineralization; Metal; Chemical engineering; Metallurgy","score_opus":0.019875923636172476,"score_gpt":0.38999077799727394,"score_spread":0.3701148543611015,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807407433","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42036414,0.00003528518,0.5763578,0.00012129089,0.00050858624,0.0001911904,0.0000072148173,0.00002053921,0.0023939977],"genre_scores_gemma":[0.28495774,0.000007977924,0.7137088,0.000837633,0.00007749426,0.000052091622,0.0000058534824,0.000020343141,0.00033207773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988452,0.0002406919,0.00019641571,0.0003582084,0.000029395314,0.00033006887],"domain_scores_gemma":[0.9995706,0.000090676316,0.00006554963,0.00022723898,0.000010071221,0.000035828925],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00050548115,0.00012499676,0.00016346922,0.000046236943,0.00008616518,0.000016767362,0.00021043174,0.00013394037,0.001158064],"category_scores_gemma":[0.0000922836,0.00011519585,0.00008889847,0.00014363536,0.00026141285,0.000051072468,0.00021489586,0.00006925549,0.0001367697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014654153,0.000025056659,0.0010194478,0.0000028119798,0.000008483298,0.0000025757759,0.00009556233,0.000004357648,0.9597902,0.00033325268,0.00013498637,0.03856861],"study_design_scores_gemma":[0.00025380935,0.00018923747,0.0067665963,0.000014004198,0.000015019905,0.000015287891,0.000021761602,0.00020004259,0.88486356,0.0037521224,0.10370097,0.00020760196],"about_ca_topic_score_codex":0.00016189167,"about_ca_topic_score_gemma":0.00009574041,"teacher_disagreement_score":0.13735104,"about_ca_system_score_codex":0.00009047212,"about_ca_system_score_gemma":0.000005446125,"threshold_uncertainty_score":0.999755},"labels":[],"label_agreement":null},{"id":"W2807430055","doi":"10.1007/978-1-4939-7825-0_10","title":"Murine Models of Huntington’s Disease for Evaluating Therapeutics","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Huntington's disease; Disease; Neuroscience; Medicine; Bioinformatics; Psychology; Biology; Internal medicine","score_opus":0.30768900566290763,"score_gpt":0.5455381742795293,"score_spread":0.2378491686166217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807430055","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015130699,0.5461571,0.4519953,0.000010126023,0.00026721347,0.0012020251,0.00013677122,0.000017172386,0.00006292706],"genre_scores_gemma":[0.000014592669,0.56088287,0.4381421,0.00025592858,0.000054616296,0.00050393183,0.000028224367,0.00007910217,0.000038648002],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9908619,0.0064441315,0.0009435621,0.0011192439,0.00015967907,0.00047149637],"domain_scores_gemma":[0.9962877,0.002006006,0.0006292254,0.0008421372,0.00013345723,0.000101489204],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015295947,0.00047688166,0.0014423229,0.00032773407,0.00005794892,0.000015592086,0.0007764671,0.00024006498,0.0000163517],"category_scores_gemma":[0.004516724,0.00040162037,0.0006178594,0.00042998636,0.0003734047,0.000020888046,0.0003122972,0.00022243803,0.0000031969078],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003822408,0.00016425867,0.000004473693,0.005546775,0.000049501115,0.0000034312516,0.00003229499,0.00017247128,0.1804748,0.005375799,0.000005581073,0.8081324],"study_design_scores_gemma":[0.00087625603,0.0008619067,0.0000018932656,0.0029462683,0.0018124129,0.0000049859286,0.000006408409,0.007815816,0.68745995,0.07999421,0.21697427,0.001245598],"about_ca_topic_score_codex":0.0000021783353,"about_ca_topic_score_gemma":4.7108858e-7,"teacher_disagreement_score":0.8068868,"about_ca_system_score_codex":0.000043024575,"about_ca_system_score_gemma":0.00037844674,"threshold_uncertainty_score":0.99984354},"labels":[],"label_agreement":null},{"id":"W2807433143","doi":"10.1007/978-1-4939-7893-9_17","title":"Genipin Cross-Linking of Elastin and Elastin-Based Proteins","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connective tissue disorders research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Genipin; Elastin; Covalent bond; Biocompatibility; Materials science; Swelling; Fabrication; Chemistry; Chemical engineering; Polymer chemistry; Composite material; Biochemistry; Organic chemistry; Engineering","score_opus":0.02760259727735092,"score_gpt":0.4434542352692836,"score_spread":0.4158516379919327,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807433143","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4662433,0.0007824582,0.53219146,0.000045474506,0.000054068503,0.0002420699,0.00000688774,0.000005921739,0.00042836298],"genre_scores_gemma":[0.55541193,0.000017798468,0.4442234,0.00010797147,0.00006339813,0.00005820651,0.00002999472,0.00002678774,0.000060506725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976366,0.0010055912,0.0003185561,0.0005687887,0.0000861936,0.0003842441],"domain_scores_gemma":[0.9990996,0.000115515184,0.00010528148,0.00040042654,0.00021535906,0.00006379118],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012801655,0.00018347646,0.00026880667,0.00017770957,0.000056494635,0.000012314844,0.00026978875,0.00029111493,0.00004659149],"category_scores_gemma":[0.001658995,0.00018257875,0.0000726891,0.00024666765,0.0008202729,0.0000018264241,0.000271382,0.00017063144,0.0000030813592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016389984,0.00005099747,0.03434193,0.000035150642,0.000028391263,0.000004339742,0.00003195691,0.000026194199,0.9469611,0.0004720783,0.000003489909,0.017880464],"study_design_scores_gemma":[0.0008814431,0.0009475837,0.005443479,0.000022960507,0.0000064821456,0.000007082068,0.000016910612,0.000664313,0.9870798,0.0016102575,0.0031290532,0.0001906657],"about_ca_topic_score_codex":0.000051402367,"about_ca_topic_score_gemma":0.000070061156,"teacher_disagreement_score":0.08916863,"about_ca_system_score_codex":0.000014396821,"about_ca_system_score_gemma":0.00011606042,"threshold_uncertainty_score":0.74453455},"labels":[],"label_agreement":null},{"id":"W2807480298","doi":"10.1007/978-1-4939-7868-7_16","title":"Translating Human Genetics into Novel Drug Targets","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute on Aging; Canadian Institutes of Health Research","keywords":"Human genome; Identification (biology); Computational biology; Drug; Biology; Human genetics; Medicine; Genetics; Genome; Gene; Pharmacology","score_opus":0.044739810607115675,"score_gpt":0.4412268270325474,"score_spread":0.3964870164254317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807480298","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000090812835,0.7861164,0.21246208,0.000011907048,0.0003642686,0.00050630287,0.00006714505,0.000013635183,0.00036744203],"genre_scores_gemma":[0.00001629569,0.60157037,0.39686596,0.00010633835,0.00028895796,0.000104072235,0.0008515609,0.00010430278,0.00009214909],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958387,0.0012824156,0.0009503435,0.0012234343,0.000086154665,0.000618968],"domain_scores_gemma":[0.99838024,0.000055513203,0.00037300301,0.0009487328,0.000088897585,0.00015361722],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011422213,0.00068645057,0.0013663456,0.00026668268,0.0001241707,0.00003034751,0.0008516286,0.00097160443,0.00002494839],"category_scores_gemma":[0.00021326212,0.0006244095,0.00076438615,0.00024949244,0.00031663847,0.0000013354969,0.00043469734,0.00037694187,0.000011227669],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011380663,0.00017889828,0.000023190467,0.002683506,0.0004185915,0.00004389933,0.00008962591,0.000007721996,0.24311471,0.00053100544,0.00014880678,0.75274867],"study_design_scores_gemma":[0.000325596,0.00017616145,0.0000015485646,0.0005078152,0.00026780652,0.000048813195,0.000013497221,0.0000097016755,0.005645013,0.0011444716,0.9911017,0.00075787114],"about_ca_topic_score_codex":0.00003534154,"about_ca_topic_score_gemma":0.000057324738,"teacher_disagreement_score":0.9909529,"about_ca_system_score_codex":0.000050456612,"about_ca_system_score_gemma":0.00030223344,"threshold_uncertainty_score":0.99962074},"labels":[],"label_agreement":null},{"id":"W2807561741","doi":"10.1007/978-1-4939-7874-8_10","title":"Chemical Screening for Strigolactone Receptor Antagonists Using Arabidopsis thaliana","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Parasitism and Resistance","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Strigolactone; Striga; Biology; Orobanche; Receptor; Hormone; Botany; Germination; Computational biology; Cell biology; Arabidopsis; Biochemistry; Gene; Mutant","score_opus":0.05534132248348382,"score_gpt":0.38457454930663026,"score_spread":0.32923322682314643,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807561741","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.667253,0.00027842296,0.33147132,0.00025459364,0.00019723688,0.00019248751,0.00011563434,0.000026920976,0.00021033958],"genre_scores_gemma":[0.10451767,0.000018031498,0.89464426,0.0003858031,0.00027892954,0.000017382219,0.00009930031,0.000001993281,0.000036652295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985658,0.0003740109,0.00022947148,0.00038900445,0.000054317698,0.00038737894],"domain_scores_gemma":[0.9994192,0.0003158422,0.000084798834,0.00006865269,0.000046389454,0.00006511958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065817597,0.00014102033,0.00025638173,0.000020328109,0.00010496023,0.000018562047,0.00024884078,0.00022309032,0.00008361474],"category_scores_gemma":[0.00021022459,0.00006282581,0.000092307935,0.00026671082,0.00019676109,0.000027912678,0.00007979387,0.000106012114,0.000004289073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068454145,0.000020800691,0.0017781806,0.00000385094,0.000011268145,0.000003630988,0.0000087404005,7.633153e-7,0.9520777,0.0004941256,0.000043317905,0.045489155],"study_design_scores_gemma":[0.00021503959,0.000119723874,0.0016129538,0.000025795434,0.000010688799,0.000015790725,0.000027805529,0.0004071946,0.9804282,0.0020657396,0.014841982,0.00022905131],"about_ca_topic_score_codex":0.00013626355,"about_ca_topic_score_gemma":0.000052700798,"teacher_disagreement_score":0.56317294,"about_ca_system_score_codex":0.000022129136,"about_ca_system_score_gemma":0.000008197464,"threshold_uncertainty_score":0.25619623},"labels":[],"label_agreement":null},{"id":"W2807588024","doi":"10.1007/978-1-4939-7804-5_7","title":"Isolation of High Quality RNA for Metatranscriptomic Analysis of Lignocellulose Digestion in the Rumen","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Rumen; RNA; Transcriptome; Metagenomics; Biology; Computational biology; Digestion (alchemy); Isolation (microbiology); Biotechnology; Food science; Gene; Bioinformatics; Chemistry; Biochemistry; Gene expression; Chromatography; Fermentation","score_opus":0.03335895806151955,"score_gpt":0.39407013063847957,"score_spread":0.36071117257696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2807588024","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.562772,0.00057475345,0.43628663,0.000056683886,0.00005658094,0.00015463776,0.00002619879,4.6418208e-7,0.00007207491],"genre_scores_gemma":[0.7651326,0.00007708737,0.23460175,0.000077060286,0.000023314655,0.00003205887,0.000045526795,0.000005901532,0.000004680805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816746,0.00090252183,0.0004539297,0.0002723357,0.00004384088,0.00015990711],"domain_scores_gemma":[0.9992337,0.00013714218,0.00018572033,0.0003260872,0.00010508212,0.000012229348],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002035338,0.00011008833,0.0003691432,0.00017397218,0.000021675092,0.0000024982235,0.00020930843,0.00014873501,0.0000032316784],"category_scores_gemma":[0.00027615475,0.00008731338,0.00017317907,0.00037632193,0.00018498067,5.2452054e-7,0.000043343596,0.000046367688,9.333511e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011960088,0.000054621094,0.010745433,0.000013561966,0.0003159155,1.10182036e-7,0.00024243229,0.00019095924,0.9829847,0.0029805843,0.0000022488048,0.0023497867],"study_design_scores_gemma":[0.00046604854,0.0004930054,0.064193964,0.000003325975,0.00021282899,3.163727e-7,0.000106573796,0.00037489602,0.9247787,0.008997981,0.00026680526,0.00010556278],"about_ca_topic_score_codex":0.00021481034,"about_ca_topic_score_gemma":0.00020407398,"teacher_disagreement_score":0.20236063,"about_ca_system_score_codex":0.000008053814,"about_ca_system_score_gemma":0.000024580622,"threshold_uncertainty_score":0.35605362},"labels":[],"label_agreement":null},{"id":"W2809621679","doi":"10.1007/978-1-4939-7802-1_23","title":"Processing Schmidtea mediterranea for Transmission Electron Microscopy: Classical and Microwave Techniques","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Planarian Biology and Electrostimulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Mennonite University","funders":"","keywords":"Flatworm; Biology; Regeneration (biology); Fixation (population genetics); Ultrastructure; Planaria; Evolutionary biology; Cell biology; Zoology; Botany; Genetics","score_opus":0.01550321509157675,"score_gpt":0.4013311474712802,"score_spread":0.3858279323797034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809621679","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.062809244,0.0016965705,0.93365455,0.0011611598,0.0000785598,0.00035988938,0.000006807401,0.000024122526,0.00020909793],"genre_scores_gemma":[0.15213364,0.00012785866,0.8453416,0.0016680098,0.00027407412,0.00007066056,0.00026480676,0.000031343265,0.000087963184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982748,0.0004421971,0.00026395379,0.0005639829,0.00003123031,0.0004238099],"domain_scores_gemma":[0.99955374,0.000050567647,0.00007983787,0.00017712485,0.00007567109,0.00006306911],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081044744,0.00020447966,0.00024692132,0.00011370684,0.00011196705,0.000014287315,0.0001504511,0.00061929884,0.0000037713655],"category_scores_gemma":[0.00018439071,0.00018553466,0.000061101804,0.00011412724,0.00037001015,0.0000042833885,0.00004955813,0.00017297463,6.7270537e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003807005,0.000025914163,0.00046776287,0.000018551824,0.000017291784,0.0000012707707,0.000031852083,3.605103e-7,0.8978898,0.00026048272,0.00019774787,0.10070825],"study_design_scores_gemma":[0.0004742897,0.0011647927,0.00018326608,0.000019927547,0.000017795226,0.000036384037,0.0000039163983,0.000411933,0.924352,0.0050893733,0.06803979,0.00020652187],"about_ca_topic_score_codex":0.000003660069,"about_ca_topic_score_gemma":0.0000122831725,"teacher_disagreement_score":0.10050173,"about_ca_system_score_codex":0.000018301174,"about_ca_system_score_gemma":0.00007234051,"threshold_uncertainty_score":0.7565884},"labels":[],"label_agreement":null},{"id":"W2809793774","doi":"10.1007/978-1-4939-8559-3_17","title":"Methods to Investigate the Protection Against Neurodegenerative Disorders Provided by Progranulin Gene Transfer in the Brain","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Neuroinflammation; Neuroscience; Autocrine signalling; Parkinson's disease; Neuroprotection; Gene transfer; Regulator; Disease; Inflammation; Biology; Psychology; Medicine; Gene; Receptor; Internal medicine; Immunology; Genetics","score_opus":0.0491869993077862,"score_gpt":0.4312102740618675,"score_spread":0.3820232747540813,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809793774","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30743673,0.00017748857,0.6513747,0.03770644,0.000080357226,0.0030432716,0.000003580419,0.00002406312,0.00015336166],"genre_scores_gemma":[0.13631046,0.00004670611,0.8445348,0.016636482,0.000118163596,0.0021788192,0.000025546165,0.000052231175,0.00009675148],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98444885,0.013695409,0.00044287968,0.000636199,0.00019745738,0.0005791994],"domain_scores_gemma":[0.99877906,0.00041435723,0.000040765903,0.00056767376,0.00008686486,0.000111277615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006532285,0.00025190884,0.00038199796,0.00020240479,0.00012263672,0.000031167303,0.00043971537,0.00022989376,0.000018633244],"category_scores_gemma":[0.00224738,0.00013694222,0.00010219846,0.0012627662,0.0006067752,0.000031923264,0.00010291497,0.0007656787,0.000007734052],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018253065,0.00008282536,0.00033260568,0.00001215564,0.000023645827,0.000006688887,0.0014880934,0.000018362993,0.85887307,0.00025540218,0.00009431254,0.1386303],"study_design_scores_gemma":[0.0015895138,0.002107518,0.004482656,0.00003797675,0.000023537674,0.000017381015,0.00013780192,0.0031375748,0.9637613,0.0045314697,0.019908141,0.00026508648],"about_ca_topic_score_codex":0.00037691137,"about_ca_topic_score_gemma":0.00027887966,"teacher_disagreement_score":0.19316012,"about_ca_system_score_codex":0.00008667175,"about_ca_system_score_gemma":0.000104145285,"threshold_uncertainty_score":0.5584341},"labels":[],"label_agreement":null},{"id":"W2809992820","doi":"10.1007/978-1-4939-8559-3_15","title":"Application of Zebrafish and Knockdown Technology to Define Progranulin Neuronal Function","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Zebrafish; Gene knockdown; Function (biology); Neuroscience; Biology; Cell biology; Genetics; Gene","score_opus":0.0120186078155356,"score_gpt":0.3915793298478499,"score_spread":0.3795607220323143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2809992820","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20694424,0.00024891153,0.79089254,0.0011173341,0.000040776187,0.00046489353,0.000010450228,0.00001717507,0.0002637012],"genre_scores_gemma":[0.468725,0.000026171258,0.5300648,0.00060253503,0.00008186565,0.00037581663,0.00007519387,0.000021283202,0.0000272897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983933,0.00030349736,0.00031617482,0.00057377305,0.00008867498,0.00032455687],"domain_scores_gemma":[0.9991015,0.000045589666,0.00008018669,0.00047863767,0.00017456092,0.000119514276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007869491,0.00014148073,0.00020860365,0.0003124185,0.00004283202,0.0000061370456,0.00028429044,0.00032594753,0.00001481414],"category_scores_gemma":[0.0009794341,0.0001384566,0.00004123653,0.00074475195,0.0006587158,0.0000020178572,0.00033463511,0.00014921205,0.0000100824645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008108922,0.00006173589,0.0036958128,0.0000088991255,0.000016667509,3.5626806e-7,0.00000605949,0.0000011304846,0.84644055,0.003788018,0.00006146781,0.14583823],"study_design_scores_gemma":[0.00044753705,0.0015524676,0.0040920936,0.000006222147,0.000010983052,0.000010093417,0.0000133239355,0.0001706005,0.9116639,0.011752235,0.0701298,0.00015077574],"about_ca_topic_score_codex":0.000028526747,"about_ca_topic_score_gemma":0.000040999526,"teacher_disagreement_score":0.26178074,"about_ca_system_score_codex":0.000012594652,"about_ca_system_score_gemma":0.00005776796,"threshold_uncertainty_score":0.5646096},"labels":[],"label_agreement":null},{"id":"W2810166551","doi":"10.1007/978-1-4939-8600-2_18","title":"In Vitro Porcine Colon Culture","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Colorectal Cancer Surgical Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"In vitro; Chemistry; Biochemistry","score_opus":0.027203253071317594,"score_gpt":0.4552421320291395,"score_spread":0.4280388789578219,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810166551","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85750324,0.0021593946,0.11417008,0.0022833773,0.0008212148,0.00093321374,0.0000090676685,0.000062216684,0.022058196],"genre_scores_gemma":[0.31769964,0.000036935373,0.67934746,0.002149102,0.00011236942,0.00008108762,0.00002327705,0.000018381319,0.00053172215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847674,0.00058339717,0.000235184,0.00035065424,0.000060144706,0.00029386036],"domain_scores_gemma":[0.9995124,0.000084439096,0.000042652544,0.00024102969,0.000048755806,0.00007074207],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051656755,0.0001416453,0.0004131117,0.0001603242,0.000014179641,0.000002580245,0.00008360227,0.00022898767,0.00019595829],"category_scores_gemma":[0.00040553443,0.00010991076,0.00006983809,0.0004780849,0.00016736578,0.000014007766,0.00007315129,0.0002227864,0.000024744171],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009691295,0.00013303719,0.009393652,0.000009675557,0.000028108854,0.00045480276,0.00014003683,3.0701256e-7,0.9722042,0.00033974627,0.000053740838,0.016273582],"study_design_scores_gemma":[0.0029494567,0.0014564274,0.006763162,0.000026411315,0.000027760138,0.00010127935,0.000023073213,0.00009874317,0.95069766,0.005098425,0.032615576,0.00014199839],"about_ca_topic_score_codex":0.00009476819,"about_ca_topic_score_gemma":0.000026118849,"teacher_disagreement_score":0.5651774,"about_ca_system_score_codex":0.00016772382,"about_ca_system_score_gemma":0.000041447336,"threshold_uncertainty_score":0.4482031},"labels":[],"label_agreement":null},{"id":"W2810223632","doi":"10.1007/978-1-4939-8559-3_3","title":"Methods for Expression and Purification of Biologically Active Recombinant Progranulin","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Recombinant DNA; Affinity chromatography; High-performance liquid chromatography; Chromatography; Biology; Biological activity; Chemistry; Biochemistry; Molecular biology; In vitro; Gene; Enzyme","score_opus":0.08010125367379553,"score_gpt":0.5093588421734598,"score_spread":0.42925758849966433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810223632","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17577802,0.00034039875,0.822161,0.00057309726,0.00008258412,0.00090142194,0.0000023125153,0.000014987959,0.00014617617],"genre_scores_gemma":[0.049793888,0.0001102645,0.94967383,0.00010711137,0.000031185587,0.00022180387,0.000016521137,0.000013170057,0.000032233158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969888,0.0019443559,0.0003395131,0.00040396306,0.000049576905,0.00027379175],"domain_scores_gemma":[0.99882764,0.00050308945,0.000118667114,0.00027166758,0.00020565366,0.00007330114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026261508,0.00011982817,0.0004135033,0.00015189151,0.00003591877,0.0000039288498,0.00011830477,0.00028415,0.000034802506],"category_scores_gemma":[0.0021264874,0.00008046447,0.00007048415,0.00022350215,0.00039429884,0.000017894592,0.00010793507,0.00016816547,9.3246945e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004119712,0.000068043955,0.0007382295,0.000025346628,0.000014698113,7.3695213e-7,0.00006688262,5.8057438e-8,0.65690464,0.0007067608,0.0000033639983,0.34105927],"study_design_scores_gemma":[0.0011469391,0.0023175164,0.015142948,0.00005900821,0.000018517108,0.000008744954,0.00002466451,0.00046929915,0.95747125,0.020620491,0.002629675,0.000090921334],"about_ca_topic_score_codex":0.000018588302,"about_ca_topic_score_gemma":7.9836974e-7,"teacher_disagreement_score":0.34096834,"about_ca_system_score_codex":0.000035512607,"about_ca_system_score_gemma":0.000039453844,"threshold_uncertainty_score":0.32812458},"labels":[],"label_agreement":null},{"id":"W2810374473","doi":"10.1007/978-1-4939-8591-3_3","title":"AFM-Based Single-Molecule Force Spectroscopy of Proteins","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Force Microscopy Techniques and Applications","field":"Physics and Astronomy","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Division of Molecular and Cellular Biosciences","keywords":"Force spectroscopy; Atomic force microscopy; Nanotechnology; Folding (DSP implementation); Materials science; Molecule; Protein folding; Biophysics; Chemistry; Biochemistry","score_opus":0.016444756348355113,"score_gpt":0.39886709512453344,"score_spread":0.3824223387761783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810374473","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038824145,0.0000313239,0.95041454,0.000098150864,0.00003547033,0.00037749048,0.00001791731,0.000029347118,0.010171624],"genre_scores_gemma":[0.24701628,2.5606693e-7,0.75265026,0.000097057025,0.000039246897,0.00010641741,0.000018437224,0.000016216978,0.000055812896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889165,0.00023983853,0.00027586808,0.00028717873,0.000039082268,0.00026635887],"domain_scores_gemma":[0.9993359,0.000046186917,0.00012649647,0.00039346138,0.000062837484,0.000035162433],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034576503,0.00013883642,0.00023657484,0.00010138094,0.00004007901,0.000008001061,0.00024149111,0.000080774276,0.00019819273],"category_scores_gemma":[0.000018808127,0.00013306315,0.00009788824,0.0002874322,0.00029174986,0.000012513537,0.00006554734,0.00011681697,0.000005994929],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010764689,0.00010469193,0.0009905854,0.000005171536,0.000009800625,2.9638974e-7,0.000019366535,0.000004325867,0.9450302,0.051381417,0.000020613847,0.0024227279],"study_design_scores_gemma":[0.00020969466,0.00032477514,0.000028521177,0.00001531243,0.000008166095,2.686778e-7,0.000013075934,0.00036780653,0.9538094,0.042763945,0.002336525,0.00012252231],"about_ca_topic_score_codex":0.000117451746,"about_ca_topic_score_gemma":0.000003113125,"teacher_disagreement_score":0.20819214,"about_ca_system_score_codex":0.000020959757,"about_ca_system_score_gemma":0.000044402972,"threshold_uncertainty_score":0.5426158},"labels":[],"label_agreement":null},{"id":"W2810608716","doi":"10.1007/978-1-4939-8559-3_13","title":"Methods to Investigate the Molecular Basis of Progranulin Action on Neurons In Vivo Using Caenorhabditis elegans","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Centre Hospitalier de l’Université de Montréal; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Caenorhabditis elegans; In vivo; Action (physics); Biology; Neuroscience; Computational biology; Genetics; Gene; Physics","score_opus":0.04557053396470631,"score_gpt":0.4133110296533844,"score_spread":0.36774049568867806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810608716","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4761123,0.00021013556,0.52255255,0.00031223314,0.00027280816,0.00037500155,0.0000101211035,0.000008896099,0.00014598417],"genre_scores_gemma":[0.27057806,0.00004264738,0.7273276,0.0017953742,0.000102927326,0.000057495206,0.0000125209845,0.000054883007,0.000028498367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99444425,0.0034496305,0.00058897963,0.0008007029,0.00013523283,0.000581228],"domain_scores_gemma":[0.99852335,0.000112838476,0.00018973571,0.0009088833,0.00013852092,0.00012666678],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022461333,0.00034868662,0.00045075413,0.00032035843,0.00008335178,0.00002077997,0.0005767432,0.00039256862,0.000025268606],"category_scores_gemma":[0.0010231099,0.00030960282,0.00016091877,0.00062237855,0.00053387845,0.0000042123306,0.00028084413,0.0003201502,0.0000032864868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076244236,0.00008762561,0.0016692186,0.000017894203,0.00004234255,0.00001006751,0.00033240614,0.0016285563,0.98171,0.0005696696,0.000023345277,0.013832608],"study_design_scores_gemma":[0.00041510933,0.00095846236,0.0008227959,0.000025465966,0.000038871323,0.000021804546,0.000084045525,0.001192262,0.9880078,0.0023066523,0.0058155437,0.00031122495],"about_ca_topic_score_codex":0.00041073348,"about_ca_topic_score_gemma":0.00029582376,"teacher_disagreement_score":0.20553423,"about_ca_system_score_codex":0.000048020986,"about_ca_system_score_gemma":0.00012304947,"threshold_uncertainty_score":0.9999356},"labels":[],"label_agreement":null},{"id":"W2810646761","doi":"10.1007/978-1-4939-8559-3_22","title":"Methods to Investigate the Roles of Progranulin in Angiogenesis Using In Vitro Strategies and Transgenic Mouse Models","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Angiogenesis; Transgene; Genetically modified mouse; In vitro; In vivo; Biology; Cell biology; Endothelial stem cell; Cancer research; Gene; Genetics","score_opus":0.04746154071116468,"score_gpt":0.406572645499401,"score_spread":0.35911110478823627,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810646761","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56377816,0.0015694407,0.4342344,0.00007028336,0.000022134702,0.0002804798,0.0000058310557,0.0000033977576,0.00003586759],"genre_scores_gemma":[0.41073555,0.00005334362,0.5889262,0.0001814762,0.000021515027,0.00005355999,0.0000065695035,0.0000176495,0.000004165252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996738,0.0019271803,0.0004288773,0.0004865086,0.00005073464,0.00036871157],"domain_scores_gemma":[0.99938947,0.00005371591,0.00008013303,0.00036614636,0.000050614617,0.000059907437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021066188,0.00021136507,0.00035937352,0.0002451397,0.000031534313,0.000018350313,0.0002850092,0.00026892117,0.0000023560008],"category_scores_gemma":[0.00016792733,0.00016866288,0.00008777096,0.0004489108,0.0004196148,0.000007793092,0.00015628799,0.0001260304,1.7531129e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015666793,0.000042712367,0.00044451348,0.000015992155,0.000023239723,0.0000020407306,0.0004162881,0.0010043713,0.9720647,0.0005944034,3.6822544e-7,0.025234735],"study_design_scores_gemma":[0.000446418,0.00027235723,0.00018462607,0.00001838472,0.000011700444,0.000004762809,0.00042851994,0.0035543963,0.9869047,0.0077741602,0.0002102207,0.00018978107],"about_ca_topic_score_codex":0.00034738096,"about_ca_topic_score_gemma":0.000649667,"teacher_disagreement_score":0.15469176,"about_ca_system_score_codex":0.000014287523,"about_ca_system_score_gemma":0.00010412809,"threshold_uncertainty_score":0.68778723},"labels":[],"label_agreement":null},{"id":"W2810660275","doi":"10.1007/978-1-4939-8603-3_14","title":"Monitoring Microtubule Dynamics in the Mouse Egg Using Photoactivatable-GFP-Tubulin","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Microtubule; Tubulin; Cell biology; Depolymerization; Green fluorescent protein; Microtubule nucleation; Microtubule organizing center; Dynamics (music); Chemistry; Biophysics; Biology; Biochemistry; Centrosome; Physics; Cell","score_opus":0.025159537404424788,"score_gpt":0.3740890387937847,"score_spread":0.3489295013893599,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810660275","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5971168,0.0006722129,0.40110373,0.00007009108,0.00024502393,0.00032237516,0.000016839276,0.000009711315,0.00044318286],"genre_scores_gemma":[0.37796974,0.0002802503,0.6201556,0.00078474364,0.0003933764,0.00008481569,0.00012166121,0.00007564441,0.00013420476],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996767,0.0013460285,0.00046609182,0.0006844391,0.00009013544,0.00064632273],"domain_scores_gemma":[0.99883795,0.00007285514,0.0001338026,0.00081589445,0.00008340168,0.00005611726],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016450587,0.00031885583,0.00033673306,0.0001986269,0.000104940664,0.00003506321,0.00070381636,0.00048695155,0.000012059783],"category_scores_gemma":[0.0002994993,0.0002750023,0.00013017117,0.0003466049,0.0002951311,0.0000062883682,0.0003094834,0.00038170887,0.0000051370603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006679677,0.00009685963,0.012249591,0.000012165661,0.00003354593,0.0000134137035,0.00012459118,0.000055278597,0.98355,0.0003222371,0.00001369688,0.0034618364],"study_design_scores_gemma":[0.0006284263,0.00023082014,0.0003137434,0.000024070932,0.000017991048,0.00005692232,0.0003799448,0.0028526161,0.990117,0.000628033,0.0044047306,0.00034570415],"about_ca_topic_score_codex":0.00047067818,"about_ca_topic_score_gemma":0.000390558,"teacher_disagreement_score":0.2191471,"about_ca_system_score_codex":0.00013799213,"about_ca_system_score_gemma":0.00009058818,"threshold_uncertainty_score":0.9999702},"labels":[],"label_agreement":null},{"id":"W2810886489","doi":"10.1007/978-1-4939-8559-3_2","title":"Chromatographic Methods for the Purification of Granulin Peptides","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Proteolysis; High-performance liquid chromatography; Peptide; Biochemistry; Chemistry; Biology; Cysteine; Denaturing high performance liquid chromatography; Haematopoiesis; Molecular biology; Cell biology; Chromatography; Gene; Stem cell; Enzyme","score_opus":0.027918363603420676,"score_gpt":0.4288572132370901,"score_spread":0.40093884963366944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2810886489","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028367825,0.0032811698,0.96708626,0.0002161002,0.00020682505,0.00050170417,0.00000993436,0.000008908353,0.00032127474],"genre_scores_gemma":[0.089682184,0.00016880906,0.90939134,0.00029265424,0.00014260471,0.00021477739,0.000034000896,0.000023360171,0.000050289498],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799865,0.0009645472,0.00034522652,0.00038987756,0.00003736815,0.0002643146],"domain_scores_gemma":[0.99891263,0.00018236443,0.00015183134,0.00056824257,0.00015216788,0.000032790107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024863419,0.00015639792,0.00023399366,0.00010841462,0.00007841466,0.00000822422,0.00038523,0.00024686134,0.000014011208],"category_scores_gemma":[0.000812814,0.00011425152,0.00018831053,0.00026186195,0.0005174753,0.0000017810676,0.00009980307,0.00008729097,0.0000011032377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059081398,0.000034877117,0.0005699017,0.000013853168,0.000051699382,1.715072e-7,0.000032347318,0.000004219076,0.9154259,0.005045473,0.00003088435,0.0787316],"study_design_scores_gemma":[0.00036107612,0.0005340832,0.0008964257,0.000008321167,0.000023688925,0.0000056992453,0.000045478464,0.0003476038,0.93065,0.009175251,0.057818662,0.00013370451],"about_ca_topic_score_codex":0.00003162656,"about_ca_topic_score_gemma":0.000021871423,"teacher_disagreement_score":0.07859789,"about_ca_system_score_codex":0.0000052740306,"about_ca_system_score_gemma":0.00004332871,"threshold_uncertainty_score":0.46590415},"labels":[],"label_agreement":null},{"id":"W2811135740","doi":"10.1007/978-1-4939-8603-3_1","title":"Growth In Vitro of Granulosa Cell–Oocyte Complexes of the Mouse","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; Canadian Institutes of Health Research","keywords":"Oocyte; Somatic cell; Cell biology; Biology; In vitro; Granulosa cell; Germ cell; Meiosis; Andrology; Embryo; Genetics; Medicine; Gene","score_opus":0.030753153867113935,"score_gpt":0.3845433580045642,"score_spread":0.35379020413745027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811135740","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94303155,0.00044980657,0.054584146,0.00030064676,0.00013102908,0.00029777217,0.000010746944,0.000006117506,0.0011881739],"genre_scores_gemma":[0.79902637,0.000010774446,0.20066172,0.00021647479,0.000022902961,0.000008621649,0.000007216109,0.00000622389,0.000039686613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997356,0.0017242039,0.00038606153,0.00030459982,0.00004586878,0.00018326801],"domain_scores_gemma":[0.9990728,0.0001435184,0.0001289165,0.00048670542,0.00014595629,0.000022109105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015871839,0.000104994484,0.00044682896,0.00012051965,0.00001561879,4.7122236e-7,0.00018401755,0.0001849441,0.000023915836],"category_scores_gemma":[0.0013017389,0.00006816927,0.000101394224,0.00030876786,0.0011481756,0.000007817049,0.000112438436,0.00020853808,0.0000013003116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018447329,0.00014698997,0.051845115,0.000043374737,0.0000179054,0.0000023047319,0.00015060086,1.8988742e-7,0.9441938,0.0004344624,0.000006564158,0.0013139592],"study_design_scores_gemma":[0.00059214875,0.00023398717,0.12633978,0.000008610178,0.00001460348,0.000005274038,0.000022186252,0.00001639806,0.8669662,0.0056143613,0.00013850974,0.00004793393],"about_ca_topic_score_codex":0.00017276115,"about_ca_topic_score_gemma":0.0000085036645,"teacher_disagreement_score":0.14607757,"about_ca_system_score_codex":0.00002123533,"about_ca_system_score_gemma":0.000042246767,"threshold_uncertainty_score":0.42305008},"labels":[],"label_agreement":null},{"id":"W2811415666","doi":"10.1007/978-1-4939-8559-3_1","title":"A Brief Overview of Progranulin in Health and Disease","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":65,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Neurodegeneration; Frontotemporal dementia; Disease; Phenotype; Inflammation; Biology; Neuroscience; Frontotemporal lobar degeneration; Dementia; Medicine; Gene; Pathology; Genetics; Immunology","score_opus":0.19691374251100863,"score_gpt":0.5694414612403016,"score_spread":0.37252771872929297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811415666","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003231982,0.9879655,0.009706811,0.0003492734,0.000047489553,0.0018243897,0.000017245096,0.000010200674,0.0000467572],"genre_scores_gemma":[0.0000011028112,0.7636161,0.2357641,0.00029629617,0.000028872695,0.00016483046,0.000064610846,0.000032627766,0.000031491963],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9925153,0.0052259844,0.0010226252,0.0006254935,0.00013320684,0.00047734813],"domain_scores_gemma":[0.9984557,0.0002626884,0.00028333132,0.00054192543,0.00004930753,0.00040706617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030241944,0.00029625176,0.0025175738,0.00046440947,0.000012960822,0.0000051061447,0.00020106901,0.00036326516,0.000047512138],"category_scores_gemma":[0.0019619262,0.00021438593,0.00025609785,0.00069885876,0.0004156666,0.000010181349,0.00026795286,0.0005640085,0.0000033969588],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005336104,0.00011239992,0.0003517973,0.0371981,0.000052619802,0.00007428705,0.000027678812,2.4683034e-8,0.000061359424,0.00062631577,0.000017185259,0.9614249],"study_design_scores_gemma":[0.0008864413,0.0008562897,0.00040556153,0.03068189,0.000106876636,0.00004034654,0.0000026233379,0.000020337651,0.000005651488,0.0024643415,0.9642939,0.00023575174],"about_ca_topic_score_codex":0.00020424547,"about_ca_topic_score_gemma":0.000009135507,"teacher_disagreement_score":0.96427673,"about_ca_system_score_codex":0.00015396115,"about_ca_system_score_gemma":0.0010343714,"threshold_uncertainty_score":0.87424046},"labels":[],"label_agreement":null},{"id":"W2811503031","doi":"10.1007/978-1-4939-8556-2_11","title":"The Role of Supercoiling in the Motor Activity of RNA Polymerases","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Agence Nationale de la Recherche","keywords":"DNA supercoil; Polymerase; RNA polymerase; Biophysics; Molecular motor; DNA polymerase; Chemistry; DNA; Biology; Physics; RNA; Biochemistry; Gene; DNA replication","score_opus":0.024805114036328332,"score_gpt":0.40266804627305314,"score_spread":0.3778629322367248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2811503031","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011959437,0.98390007,0.0028671785,0.000013127562,0.000117234864,0.00033107685,0.000050208135,0.000002724408,0.00075893593],"genre_scores_gemma":[0.0019021055,0.9790673,0.01865315,0.000032418924,0.00011836938,0.000092477276,0.00006465329,0.000038745795,0.00003074277],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99623173,0.0022316293,0.0006418568,0.00046410595,0.00009422356,0.0003364396],"domain_scores_gemma":[0.9981861,0.00042124157,0.00036452417,0.0009507926,0.00004843539,0.000028889794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019011189,0.000322668,0.0009222725,0.00008236377,0.000040320734,0.000007218549,0.0010348564,0.0006790965,0.0000055855953],"category_scores_gemma":[0.000776425,0.000192396,0.00045405727,0.00025157316,0.00057175197,0.0000014836451,0.00029675468,0.0003458097,5.558417e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023443947,0.000049713282,0.000024102948,0.0003831523,0.00006853754,0.0000020515913,0.00001632433,1.366665e-7,0.6257903,0.00008655618,0.000005617256,0.3735501],"study_design_scores_gemma":[0.00012497284,0.00015820732,0.0000038418543,0.00034224993,0.00008122801,0.000017376546,0.00004910197,0.0000040013047,0.623603,0.00038648065,0.37504977,0.0001797792],"about_ca_topic_score_codex":0.00006490461,"about_ca_topic_score_gemma":0.000015398558,"teacher_disagreement_score":0.37504417,"about_ca_system_score_codex":0.000017572465,"about_ca_system_score_gemma":0.00017338886,"threshold_uncertainty_score":0.7845681},"labels":[],"label_agreement":null},{"id":"W2835232122","doi":"10.1007/978-1-4939-8597-5_7","title":"Measuring Cardiomyocyte Contractility and Calcium Handling In Vitro","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; American Heart Association","keywords":"Contractility; Myofilament; Sarcomere; Myocyte; Calcium in biology; Calcium; Cardiac myocyte; Chemistry; Cardiology; Biomedical engineering; Internal medicine; Cell biology; Biology; Medicine","score_opus":0.03930091725841925,"score_gpt":0.3914501074475838,"score_spread":0.3521491901891646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2835232122","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76638865,0.0016839155,0.23035853,0.0002061647,0.00020714193,0.00020727646,0.0000016935751,0.000019214629,0.0009273777],"genre_scores_gemma":[0.8128472,0.000034115823,0.18650104,0.00043259008,0.00013626934,0.00002061397,0.0000047914873,0.000010779274,0.000012597844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979265,0.0010519782,0.00024165379,0.0003865878,0.000043049986,0.00035026565],"domain_scores_gemma":[0.9993703,0.00022749332,0.00004212113,0.00024785762,0.00005064588,0.00006161189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014368414,0.00013547487,0.00054514216,0.00017093636,0.00003734204,0.000003947987,0.00004391496,0.00023261303,0.000007497459],"category_scores_gemma":[0.00076425576,0.00012296856,0.00008947655,0.00019228921,0.00030704442,0.000017606537,0.00006452089,0.0003778437,0.0000028369795],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00060693617,0.000018759527,0.0043152496,0.00001502606,0.000044119115,0.0002337508,0.000070048074,0.0000029721843,0.9666516,0.00014804654,0.000001062756,0.02789239],"study_design_scores_gemma":[0.0012986922,0.0001791848,0.025516637,0.000024415716,0.000036347046,0.00027234133,0.000020417137,0.00036513654,0.96918386,0.0023133396,0.0006593317,0.00013032381],"about_ca_topic_score_codex":0.00010960092,"about_ca_topic_score_gemma":0.000010046461,"teacher_disagreement_score":0.046458524,"about_ca_system_score_codex":0.000059866165,"about_ca_system_score_gemma":0.000054677465,"threshold_uncertainty_score":0.5014512},"labels":[],"label_agreement":null},{"id":"W2867580975","doi":"10.1007/978-1-4939-7786-4_15","title":"Creating Leaf Cell Suspensions for Characterization of Mesophyll and Bundle Sheath Cellular Features","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Plasmodesma; Chloroplast; Organelle; Vascular bundle; Arabidopsis; Photosynthesis; C4 photosynthesis; Biology; Botany; Biophysics; Cell biology; Cell wall; Gene; Biochemistry","score_opus":0.012547485019735826,"score_gpt":0.3337779411909108,"score_spread":0.32123045617117496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2867580975","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44924504,0.0002561425,0.5497962,0.000029986035,0.00009539874,0.00020496405,0.00001585708,0.000004556245,0.00035187093],"genre_scores_gemma":[0.67298824,0.00008687002,0.32633898,0.00018199348,0.000077796314,0.000040031595,0.00011339477,0.000022181943,0.00015049241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988477,0.00022501037,0.00024169288,0.00040127712,0.00003897285,0.00024533982],"domain_scores_gemma":[0.9993939,0.00004670759,0.00012403494,0.00026751665,0.0001168415,0.000051001654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056114304,0.00015410385,0.0002467669,0.000076995064,0.00006291048,0.00000806068,0.00014623611,0.0002475462,0.0000094308525],"category_scores_gemma":[0.00028759838,0.00014324185,0.00006691024,0.00009641353,0.00015270714,0.0000024870158,0.00012879909,0.00006681147,3.4780436e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072044786,0.00005859611,0.00008548829,0.000035258225,0.00001451454,7.2803977e-7,0.00006669835,8.6227436e-7,0.9958462,0.0014688338,0.000002473157,0.0023482742],"study_design_scores_gemma":[0.00045615234,0.00077013916,0.00010142328,0.000015375635,0.000022615834,0.000007777272,0.000039296887,0.00013393282,0.99229795,0.0038079373,0.0021991425,0.00014823995],"about_ca_topic_score_codex":0.000017563609,"about_ca_topic_score_gemma":0.000008520631,"teacher_disagreement_score":0.22374322,"about_ca_system_score_codex":0.00000598794,"about_ca_system_score_gemma":0.000044617642,"threshold_uncertainty_score":0.5841233},"labels":[],"label_agreement":null},{"id":"W2883926931","doi":"10.1007/978-1-4939-8685-9_8","title":"Fly Models of Vibrio cholerae Infection and Colonization","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Massachusetts Amherst; Ryerson University","keywords":"Vibrio cholerae; Colonization; Biology; Context (archaeology); Virulence; Host (biology); Drosophila (subgenus); Microbiology; Cholera; Evolutionary biology; Ecology; Gene; Genetics; Bacteria","score_opus":0.03207277314738245,"score_gpt":0.3450215339804436,"score_spread":0.31294876083306117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2883926931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974829,0.00008636439,0.024187343,0.000097555196,0.00014736847,0.00009490293,0.000004350366,0.000011728952,0.00054135366],"genre_scores_gemma":[0.95045054,0.000053243115,0.049150426,0.00022921263,0.0000873413,0.000007445502,0.000011063172,5.9435575e-7,0.00001012056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990615,0.00042519934,0.0001825994,0.00017905082,0.00002952996,0.00012208834],"domain_scores_gemma":[0.9997258,0.00007785617,0.000075262775,0.000033422955,0.00006743545,0.000020226573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005214372,0.00007062292,0.00014998132,0.000020803633,0.00004700903,0.000011708108,0.000064795866,0.00013112692,0.000061159815],"category_scores_gemma":[0.00008873789,0.000030203133,0.000027115053,0.00021739723,0.00016454562,0.00004672025,0.00004864446,0.000046447232,0.0000010458591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014168946,0.000017190878,0.0073256735,0.0000021414219,0.000003789314,2.1585944e-7,0.000036837635,0.0000031926138,0.95226693,0.002914081,0.0000015409016,0.037414227],"study_design_scores_gemma":[0.0001177495,0.0006927343,0.101593,0.00001409088,0.0000060442712,0.000004221047,0.000011543402,0.00061779615,0.86973053,0.026013969,0.0010793294,0.00011898143],"about_ca_topic_score_codex":0.00057533645,"about_ca_topic_score_gemma":0.00028103232,"teacher_disagreement_score":0.09426733,"about_ca_system_score_codex":0.000007278347,"about_ca_system_score_gemma":0.0000037166155,"threshold_uncertainty_score":0.1231648},"labels":[],"label_agreement":null},{"id":"W2884273041","doi":"10.1007/978-1-4939-8661-3_9","title":"Ultrasound and Microbubble-Mediated Blood-Brain Barrier Disruption for Targeted Delivery of Therapeutics to the Brain","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"","keywords":"Blood–brain barrier; Parenchyma; Medicine; Neuroscience; Microbubbles; Focused ultrasound; Ultrasound; Central nervous system; Pathology; Biology; Radiology","score_opus":0.015590366765466636,"score_gpt":0.32702716391288,"score_spread":0.31143679714741335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2884273041","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39188132,0.00061935995,0.60653573,0.00043107063,0.000073422896,0.0003120957,0.000058084774,0.000028356832,0.00006053745],"genre_scores_gemma":[0.34480584,0.00008849479,0.65253097,0.002168902,0.000082946106,0.00017672316,0.00006527229,0.000042291824,0.0000385599],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991601,0.00022899314,0.00020482125,0.0001777666,0.000027658323,0.00020065492],"domain_scores_gemma":[0.99854094,0.0011209549,0.000027882503,0.00022263038,0.000051093684,0.00003650758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006113058,0.000117240044,0.00016845837,0.00008297333,0.00004873094,0.0000092547825,0.00014887175,0.00013525005,0.000012234308],"category_scores_gemma":[0.00027780986,0.00009137027,0.000042325217,0.00021975383,0.00014905435,0.000013414285,0.000020671858,0.00008976409,0.0000024092046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010250896,0.000013575577,0.00037356713,0.000010260217,0.00006207077,1.6540189e-7,0.00044822422,0.000083383726,0.99271333,0.00088691845,0.00007980588,0.0053184675],"study_design_scores_gemma":[0.00058565935,0.00019927263,0.00153816,0.000011281716,0.00006175797,0.000016264228,0.00013322827,0.0018077609,0.92201173,0.0052815573,0.06811768,0.00023565444],"about_ca_topic_score_codex":0.000014280396,"about_ca_topic_score_gemma":0.000044630393,"teacher_disagreement_score":0.070701584,"about_ca_system_score_codex":0.000011350601,"about_ca_system_score_gemma":0.0000124776325,"threshold_uncertainty_score":0.37259716},"labels":[],"label_agreement":null},{"id":"W2885257850","doi":"10.1007/978-1-4939-8742-9_11","title":"Screening, Isolation, and Identification of Zeaxanthin-Producing Bacteria","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antioxidant Activity and Oxidative Stress","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Zeaxanthin; Food science; Carotenoid; Biology; Isolation (microbiology); Xanthophyll; Nutraceutical; Bacteria; Biotechnology; Chemistry; Lutein; Microbiology; Genetics","score_opus":0.03354076030313082,"score_gpt":0.4183237292028227,"score_spread":0.3847829688996919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885257850","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43955162,0.00009564233,0.5599504,0.000119000964,0.00005822789,0.00008427985,0.000002035944,0.0000067491073,0.00013203587],"genre_scores_gemma":[0.49403217,0.000015301666,0.50579184,0.00005760824,0.000034805373,0.0000028196735,0.000008706849,0.000005378079,0.00005134926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99885714,0.00047596142,0.0002597484,0.00025406928,0.00003937607,0.00011369306],"domain_scores_gemma":[0.9994438,0.00009043572,0.00013801095,0.0002075113,0.00009406146,0.000026132084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011083867,0.000075999575,0.00022038662,0.00014699809,0.000030961077,0.000004260988,0.00004794322,0.00009879788,0.00004063614],"category_scores_gemma":[0.0007875205,0.000069589085,0.000028613202,0.00017450812,0.0003024202,0.00003799093,0.000047446734,0.00009658811,0.0000012434298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000645853,0.000024858156,0.035577446,0.000024034136,0.000020746245,0.000001718715,0.00025668304,3.168122e-7,0.9343562,0.001281626,0.0000036873496,0.028388107],"study_design_scores_gemma":[0.0002752091,0.00014373593,0.23661514,0.00003357957,0.000019994188,0.000012273226,0.00004546123,0.00038246007,0.76073146,0.001492751,0.00019507205,0.000052861218],"about_ca_topic_score_codex":0.000043971337,"about_ca_topic_score_gemma":0.0000050779117,"teacher_disagreement_score":0.20103769,"about_ca_system_score_codex":0.000007769694,"about_ca_system_score_gemma":0.00001597,"threshold_uncertainty_score":0.28377604},"labels":[],"label_agreement":null},{"id":"W2885357425","doi":"10.1007/978-1-4939-8612-5_8","title":"Screening for Rho GTPase Modulators in Actin-Dependent Processes Exemplified by Phagocytosis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; St. Michael's Hospital; Hospital for Sick Children; University of Toronto","funders":"","keywords":"GTPase; Cell biology; CDC42; GTPase-activating protein; Guanine nucleotide exchange factor; Biology; Small GTPase; Actin remodeling; Actin cytoskeleton; Cell; Signal transduction; Biochemistry; Cytoskeleton; G protein","score_opus":0.03017694981068502,"score_gpt":0.38813627798899586,"score_spread":0.35795932817831083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885357425","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24507602,0.001192664,0.75288725,0.00010795884,0.00009888032,0.0004852258,0.000031212574,0.00001624809,0.00010452751],"genre_scores_gemma":[0.52483857,0.00003459601,0.4737848,0.00062026636,0.00012143138,0.0002666614,0.00019200356,0.000041466676,0.00010022467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777454,0.0005271057,0.0004278263,0.0007062652,0.0000835085,0.00048073786],"domain_scores_gemma":[0.9991665,0.00007584874,0.00014605011,0.000363387,0.00016101355,0.000087203116],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001242,0.0002559491,0.00031436715,0.00019618294,0.000077364326,0.0000199638,0.00027009565,0.0003782744,0.000021959104],"category_scores_gemma":[0.0011231609,0.00025926076,0.00009826972,0.00030306523,0.000164641,0.000005952638,0.00014042722,0.00013500688,0.0000017791455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024860885,0.000071469505,0.0011451356,0.000042210948,0.000029977784,0.0000037055158,0.00004367292,0.00008340012,0.9779403,0.00019996405,0.000046363974,0.02014514],"study_design_scores_gemma":[0.0012938305,0.00036474163,0.00009480262,0.000030985702,0.000012123623,0.000007624391,0.000059220376,0.00046096178,0.98855734,0.0014143417,0.0073965364,0.00030749533],"about_ca_topic_score_codex":0.00006521054,"about_ca_topic_score_gemma":0.00007486786,"teacher_disagreement_score":0.27976254,"about_ca_system_score_codex":0.000030048757,"about_ca_system_score_gemma":0.00010206441,"threshold_uncertainty_score":0.99998593},"labels":[],"label_agreement":null},{"id":"W28854146","doi":"10.1007/978-1-59745-519-0_12","title":"Differential Scanning Calorimetry in the Study of Lipid Phase Transitions in Model and Biological Membranes","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":76,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Thermotropic crystal; Differential scanning calorimetry; Phase transition; Membrane; Phase (matter); Biological membrane; Calorimetry; Chemistry; Lipid bilayer phase behavior; Materials science; Lipid bilayer; Thermodynamics; Organic chemistry; Biochemistry; Physics","score_opus":0.09415110145745946,"score_gpt":0.4733187833572072,"score_spread":0.3791676818997477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W28854146","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31659788,0.6319599,0.04910885,0.000013145758,0.00025994197,0.0018967816,0.00007095583,0.00000764737,0.00008488397],"genre_scores_gemma":[0.06914841,0.88741904,0.041916743,0.00013977343,0.00027721107,0.00043716657,0.00056533946,0.00008254462,0.000013742083],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99479747,0.0029244188,0.0009710832,0.00078200357,0.00009747599,0.0004275413],"domain_scores_gemma":[0.9990646,0.00015034295,0.00020316092,0.0005029454,0.000028444072,0.000050462728],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014835461,0.00046610675,0.0014692314,0.0005019277,0.000035969006,0.000010471659,0.00048654078,0.0009278735,0.000009395208],"category_scores_gemma":[0.00018249109,0.00030702597,0.000252335,0.0005270119,0.0002560014,0.0000025868496,0.00015773435,0.0006646462,1.6220173e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014722547,0.0015722096,0.00037855108,0.0012266582,0.000116300565,0.00008978862,0.00064689317,0.00005436856,0.4390124,0.0001294814,0.0000018334443,0.5566243],"study_design_scores_gemma":[0.09146481,0.03997935,0.0030065833,0.0138497455,0.009987609,0.00272718,0.014236459,0.0023846247,0.33502117,0.0029404582,0.46582004,0.018581968],"about_ca_topic_score_codex":0.00005247173,"about_ca_topic_score_gemma":0.00010835973,"teacher_disagreement_score":0.5380423,"about_ca_system_score_codex":0.000019859932,"about_ca_system_score_gemma":0.00009516405,"threshold_uncertainty_score":0.9999382},"labels":[],"label_agreement":null},{"id":"W2885481610","doi":"10.1007/978-1-4939-8742-9_10","title":"Purification and Identification of Astaxanthin and Its Novel Derivative Produced by Radio-tolerant Sphingomonas astaxanthinifaciens","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Astaxanthin; Canthaxanthin; Carotenoid; Strain (injury); Identification (biology); Nutraceutical; Ingredient; Biology; Chemistry; Food science; Botany","score_opus":0.01702152187247736,"score_gpt":0.3507281233693329,"score_spread":0.33370660149685555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2885481610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52156055,0.00078133435,0.4772191,0.000109619774,0.00006592775,0.00020491377,0.000027457665,0.0000050320755,0.000026055517],"genre_scores_gemma":[0.88834196,0.00020434875,0.11119947,0.00010246182,0.000026777361,0.00003790773,0.000042015115,0.000017736716,0.000027323154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846727,0.0002722439,0.00037937736,0.0005853426,0.0000651019,0.00023068777],"domain_scores_gemma":[0.9992238,0.000031946125,0.0002472348,0.00027903361,0.00015574464,0.00006223837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012662689,0.00016885983,0.00023593534,0.00008897481,0.000060695736,0.000013316769,0.00016459021,0.00021086088,0.000004537626],"category_scores_gemma":[0.00081225246,0.00016210967,0.000030182166,0.00015443949,0.0002624654,0.0000066591347,0.0001243998,0.00009377958,5.4996434e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005271114,0.00006194704,0.000069806905,0.000031192845,0.000024437333,4.578354e-7,0.00022622297,0.000001648704,0.9932932,0.0025785244,0.0000026973728,0.0036571252],"study_design_scores_gemma":[0.0004024898,0.00031929938,0.00015853006,0.00001446483,0.000014745699,0.00001870938,0.00008915496,0.0009548889,0.9955991,0.0012851654,0.0009734275,0.0001700312],"about_ca_topic_score_codex":0.000017371176,"about_ca_topic_score_gemma":0.0000036759711,"teacher_disagreement_score":0.3667814,"about_ca_system_score_codex":0.000008936982,"about_ca_system_score_gemma":0.000046950092,"threshold_uncertainty_score":0.661064},"labels":[],"label_agreement":null},{"id":"W2886011478","doi":"10.1007/978-1-4939-8612-5_9","title":"An In Vitro Kinase Assay to Assess Rac1 Phosphorylation by ERK","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Phosphorylation; RAC1; Kinase; MAPK/ERK pathway; Biochemistry; Protein kinase A; GTPase; Biology; Molecular biology; Chemistry; Cell biology; Signal transduction","score_opus":0.022887910400136373,"score_gpt":0.3863650042830952,"score_spread":0.36347709388295885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2886011478","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20328112,0.0005692231,0.79522127,0.00013220569,0.00014667094,0.00031179676,0.0000146457205,0.000015369367,0.00030771727],"genre_scores_gemma":[0.42075542,0.000010222451,0.5777576,0.001001967,0.000096933785,0.00007484151,0.00023862906,0.000026789392,0.000037612313],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99672115,0.0017645377,0.00036818068,0.00065987295,0.00008597551,0.00040026967],"domain_scores_gemma":[0.9991399,0.00003895898,0.00008974357,0.00050457113,0.00009486987,0.0001319566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022239254,0.00021628107,0.00025873978,0.00019654138,0.00005030137,0.00002189868,0.00027359303,0.00037303855,0.000038775983],"category_scores_gemma":[0.0005576323,0.00022673876,0.00006567068,0.00037146333,0.00011981748,0.0000049032665,0.0001113204,0.00015317385,0.0000098834835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019745683,0.000083962004,0.0008206471,0.000004742964,0.0000100551115,0.000008407457,0.00003541637,0.00008431492,0.9707789,0.00029266844,0.00005911333,0.027624313],"study_design_scores_gemma":[0.00054065854,0.00033991376,0.00038086434,0.000010488968,0.000005287692,0.0000047202097,0.000022392505,0.0010968938,0.9845948,0.0011328579,0.011594599,0.00027650883],"about_ca_topic_score_codex":0.000059811293,"about_ca_topic_score_gemma":0.000037602207,"teacher_disagreement_score":0.21747428,"about_ca_system_score_codex":0.00004658171,"about_ca_system_score_gemma":0.00006264322,"threshold_uncertainty_score":0.92461383},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W2887425559","doi":"10.1007/978-1-4939-8588-3_8","title":"Methods to Study TCDD-Inducible Poly-ADP-Ribose Polymerase (TIPARP) Mono-ADP-Ribosyltransferase Activity","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"PARP inhibition in cancer therapy","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Poly ADP ribose polymerase; Polymerase; ADP-ribosylation; Regulator; Transcription factor; Chemistry; Function (biology); Biochemistry; Cell biology; Molecular biology; Biology; Enzyme; Gene; NAD+ kinase","score_opus":0.062395918082453206,"score_gpt":0.5081017112381588,"score_spread":0.44570579315570563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887425559","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36247164,0.0006892829,0.6315735,0.0017926939,0.00083005696,0.0013408451,0.000024693836,0.00013162478,0.0011456333],"genre_scores_gemma":[0.2612732,0.000025172198,0.7329766,0.0044839387,0.00047908598,0.00048239526,0.0000141244645,0.00010179102,0.00016369825],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98892456,0.007330091,0.00083737756,0.0015415385,0.00028768549,0.0010787615],"domain_scores_gemma":[0.99662083,0.0007036642,0.00016690428,0.0017167507,0.00023982646,0.0005519941],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0054894686,0.0006310044,0.001315203,0.00088880846,0.00018519134,0.000032978285,0.00048464636,0.0005030311,0.0008228227],"category_scores_gemma":[0.001144754,0.00060207734,0.00029938994,0.0015996424,0.0004168946,0.00008840822,0.00021366718,0.0008416417,0.000089502544],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012162363,0.0010214396,0.0035402216,0.000017364893,0.00023273556,0.0001535947,0.00096944947,0.0000028973075,0.7888181,0.0002699717,0.00007820643,0.20367976],"study_design_scores_gemma":[0.004662928,0.0038236403,0.003111802,0.00005251463,0.00015161994,0.00010319205,0.00025532613,0.00014705097,0.97677183,0.002270376,0.008070142,0.0005795957],"about_ca_topic_score_codex":0.00065031927,"about_ca_topic_score_gemma":0.00005459612,"teacher_disagreement_score":0.20310016,"about_ca_system_score_codex":0.00032516103,"about_ca_system_score_gemma":0.0002849218,"threshold_uncertainty_score":0.9996431},"labels":[],"label_agreement":null},{"id":"W2887491454","doi":"10.1007/978-1-4939-8745-0_24","title":"Zymographic Determination of Intrinsic Specific Activity of Oxidases in the Presence of Interfering Proteins","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Zymography; Peroxidase; Chemistry; Substrate (aquarium); Catalase; Biochemistry; Hydrogen peroxide; Enzyme; Oxidase test; Coomassie Brilliant Blue; Polyacrylamide gel electrophoresis; Chromatography; Electrophoresis; Staining; Biology","score_opus":0.02149876119543838,"score_gpt":0.3394955365020373,"score_spread":0.3179967753065989,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887491454","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.621323,0.0002954776,0.3780264,0.000011452708,0.00009357175,0.00017199558,0.0000061700907,0.000001130487,0.00007081856],"genre_scores_gemma":[0.8783499,0.000101839265,0.12145946,0.000015429134,0.00003798251,0.000019633508,0.0000059952226,0.0000066063317,0.0000031603322],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982008,0.001070838,0.00031116023,0.0002279053,0.00005092871,0.0001383729],"domain_scores_gemma":[0.99929506,0.00006495251,0.00019230437,0.00035038596,0.00008595023,0.000011343466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011504429,0.000099641926,0.00022979507,0.00019270569,0.000011100846,0.0000017227519,0.00024820335,0.00014861584,0.000006855229],"category_scores_gemma":[0.00044795152,0.00007989033,0.00007181187,0.00034186096,0.0003500635,0.000003757304,0.000108590786,0.00009158799,1.6756647e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015475061,0.00009382158,0.001899013,0.00003897895,0.000007514271,5.596314e-7,0.00012453049,0.0000039240704,0.96480906,0.0003577757,0.0000037277057,0.032506317],"study_design_scores_gemma":[0.0002813145,0.0004763071,0.008170912,0.000032512846,0.0000064099677,0.0000043773694,0.00004191088,0.00002711835,0.9897265,0.000636175,0.0005286997,0.00006778397],"about_ca_topic_score_codex":0.000087554705,"about_ca_topic_score_gemma":0.00008368561,"teacher_disagreement_score":0.2570269,"about_ca_system_score_codex":0.0000042498414,"about_ca_system_score_gemma":0.000021159489,"threshold_uncertainty_score":0.3257833},"labels":[],"label_agreement":null},{"id":"W2887670173","doi":"10.1007/978-1-4939-8745-0_22","title":"Fluorescent Protein Visualization Immediately After Gel Electrophoresis Using an In-Gel Trichloroethanol Photoreaction with Tryptophan","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; ExxonMobil Research and Engineering Company","keywords":"Tryptophan; Chemistry; Polyacrylamide gel electrophoresis; Polyacrylamide; Fluorescence; Chromatography; Gel electrophoresis; Gel electrophoresis of proteins; Acrylamide; Staining; Electrophoresis; Biochemistry; Amino acid; Monomer; Organic chemistry; Biology; Polymer chemistry; Polymer","score_opus":0.019027302193464053,"score_gpt":0.3865760685272031,"score_spread":0.36754876633373906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887670173","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47238335,0.000058569098,0.52715504,0.000011138733,0.000010593462,0.0002741452,0.0000037053367,0.000037628142,0.00006584171],"genre_scores_gemma":[0.32109115,0.000023544397,0.67806786,0.00005938649,0.000060452974,0.0006188029,0.000033549255,0.000037076912,0.000008181954],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984545,0.00026558738,0.00033055866,0.0005155837,0.00007766264,0.00035610655],"domain_scores_gemma":[0.9992851,0.00002812963,0.00015374116,0.00039076252,0.00008373187,0.000058547885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003646753,0.00020684549,0.0002468319,0.0002036563,0.000047556703,0.000014896029,0.00017822818,0.0002928416,0.00006145175],"category_scores_gemma":[0.000080104,0.00019178375,0.00003878775,0.00046810217,0.00014174027,0.00006187717,0.000051045223,0.00024463292,0.0000013678645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029590528,0.00013794153,0.0011099128,0.000018189701,0.000008468777,0.000009777511,0.00007780509,0.000009971492,0.99161804,0.000651999,2.4096414e-7,0.0060617425],"study_design_scores_gemma":[0.00045768885,0.00018084401,0.00011932307,0.00003655111,0.000011003211,0.000010787499,0.000028280485,0.0033216274,0.98826486,0.007067702,0.00027002816,0.00023132296],"about_ca_topic_score_codex":0.00017978043,"about_ca_topic_score_gemma":0.000050098934,"teacher_disagreement_score":0.1512922,"about_ca_system_score_codex":0.0002204879,"about_ca_system_score_gemma":0.00005796401,"threshold_uncertainty_score":0.7820715},"labels":[],"label_agreement":null},{"id":"W2887903949","doi":"10.1007/978-1-4939-8742-9_9","title":"Rapid and Selective Screening Method for Isolation and Identification of Carotenoid-Producing Bacteria","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Carotenoid; Nutraceutical; Bacteria; Isolation (microbiology); Microorganism; Biology; Food science; Identification (biology); Biotechnology; Microbiology; Botany","score_opus":0.018229488586611674,"score_gpt":0.3798059311057023,"score_spread":0.36157644251909066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2887903949","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23413745,0.00070854137,0.7646909,0.000067312714,0.000050818435,0.00030208187,0.000019490655,0.0000035730675,0.000019865345],"genre_scores_gemma":[0.13034803,0.00009284125,0.86924535,0.000088706875,0.00009013444,0.000060820905,0.000042075237,0.00001299273,0.000019078056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986863,0.00045195382,0.00027407578,0.00042613506,0.000019114417,0.00014242392],"domain_scores_gemma":[0.99942034,0.000054363256,0.0001441348,0.00022192717,0.00013208203,0.00002714906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013207638,0.00010265337,0.00018429915,0.00008510735,0.000060433253,0.0000090054355,0.00007843833,0.00015158892,0.0000021647277],"category_scores_gemma":[0.00046125756,0.00010470518,0.000032066935,0.00012483615,0.00014053976,0.000003488143,0.00007752474,0.000048232832,1.2299883e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004708368,0.0000098270175,0.00030433486,0.000014995631,0.000021569615,2.7251915e-8,0.00010791851,0.0000024781684,0.928766,0.00088514725,0.000009914067,0.06983071],"study_design_scores_gemma":[0.0003429964,0.0001606247,0.006325732,0.0000055214286,0.000026116755,0.0000062200293,0.00003260439,0.00064148713,0.9870641,0.002508782,0.0027789187,0.000106856634],"about_ca_topic_score_codex":0.00003718456,"about_ca_topic_score_gemma":0.000009412174,"teacher_disagreement_score":0.104554445,"about_ca_system_score_codex":0.0000036239408,"about_ca_system_score_gemma":0.000017951226,"threshold_uncertainty_score":0.4269753},"labels":[],"label_agreement":null},{"id":"W2888789956","doi":"10.1007/978-1-4939-8651-4_3","title":"Recent Advances and Clinical Applications of Exon Inclusion for Spinal Muscular Atrophy","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"SMN1; Spinal muscular atrophy; SMA*; Morpholino; Exon; Exon skipping; Motor neuron; Biology; Alternative splicing; Molecular biology; Gene knockdown; Cancer research; Medicine; Neuroscience; Genetics; Gene; Spinal cord","score_opus":0.12304126368123822,"score_gpt":0.5877653257518548,"score_spread":0.46472406207061656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888789956","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008148104,0.57925314,0.4187033,0.00003521269,0.000066465545,0.00185367,0.000008784186,0.00000546138,0.000065832806],"genre_scores_gemma":[2.2787286e-7,0.6180508,0.38131157,0.000053935983,0.00006779092,0.0004170479,0.000059945884,0.000027271179,0.000011397379],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9961378,0.0018268388,0.0009102561,0.0007049216,0.00012689264,0.00029330121],"domain_scores_gemma":[0.9984524,0.00039092966,0.0002831689,0.00058506464,0.00017346913,0.00011493261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00241713,0.00026092058,0.0016959701,0.000321684,0.000065389686,0.0000031480738,0.00024488627,0.00053242134,0.000015124183],"category_scores_gemma":[0.0009895106,0.00020070533,0.000561536,0.00039215945,0.0005328168,0.000007234697,0.0006528426,0.0003751815,0.0000018223658],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065056396,0.00013075852,0.0000310331,0.00739335,0.00012725714,0.000005586199,0.0000048542533,3.8034237e-8,0.0002868637,0.00021445935,0.000005817912,0.9917349],"study_design_scores_gemma":[0.00067135156,0.0014646269,0.000007122384,0.0011194253,0.0005682614,0.000033302276,0.0000052770292,0.000010236374,0.00013898195,0.0022647858,0.9935662,0.0001504338],"about_ca_topic_score_codex":0.0000030979331,"about_ca_topic_score_gemma":0.0000022473814,"teacher_disagreement_score":0.9935604,"about_ca_system_score_codex":0.000034188455,"about_ca_system_score_gemma":0.0002596902,"threshold_uncertainty_score":0.8184526},"labels":[],"label_agreement":null},{"id":"W2888821560","doi":"10.1007/978-1-4939-8651-4_1","title":"Invention and Early History of Exon Skipping and Splice Modulation","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; Exon; splice; RNA splicing; Alternative splicing; Spinal muscular atrophy; Duchenne muscular dystrophy; Splice site mutation; Genetics; Biology; Computational biology; Antisense therapy; Bioinformatics; Medicine; RNA; Gene","score_opus":0.12039137040258119,"score_gpt":0.4858962177079389,"score_spread":0.3655048473053577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888821560","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008459881,0.90367883,0.094289705,0.000008756119,0.00009866178,0.00061927194,0.0000010741516,0.0000062967883,0.00045139037],"genre_scores_gemma":[0.000012929272,0.85696745,0.14276432,0.00002511449,0.000022205406,0.000039914834,0.000015789145,0.000024698315,0.00012761152],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997558,0.0013839349,0.00040310877,0.0004067973,0.000077262885,0.00017091329],"domain_scores_gemma":[0.9993336,0.00011454605,0.00016906712,0.00027043073,0.000052582178,0.000059754842],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010970106,0.00017409377,0.0009351314,0.0004026066,0.0000106825055,0.0000018881816,0.000064570115,0.00035242547,0.000011059813],"category_scores_gemma":[0.00036006237,0.00015224278,0.00014061881,0.00014854799,0.00029997827,0.000009737283,0.0001160692,0.0002484693,8.717801e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010359643,0.000025408928,0.0001971322,0.005751822,0.00007301775,0.000009813168,0.000057473702,3.8791786e-8,0.007874005,0.00025741398,0.000009216243,0.9857343],"study_design_scores_gemma":[0.0006520172,0.0005510369,0.0005315943,0.0032731385,0.00045325005,0.00011542129,0.00001036509,0.000085656655,0.0002065702,0.0016414775,0.9922496,0.00022987553],"about_ca_topic_score_codex":0.00005316932,"about_ca_topic_score_gemma":0.000002113726,"teacher_disagreement_score":0.99224037,"about_ca_system_score_codex":0.00008301215,"about_ca_system_score_gemma":0.0001459402,"threshold_uncertainty_score":0.62082803},"labels":[],"label_agreement":null},{"id":"W2888872758","doi":"10.1007/978-1-4939-8799-3_2","title":"Computational Methods for Analysis of the DNA-Binding Preferences of Cys2His2 Zinc-Finger Proteins","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University; McGill University and Génome Québec Innovation Centre","funders":"","keywords":"Zinc finger; Computational biology; DNA; Sequence (biology); Biology; DNA-binding protein; Genetics; Computer science; Transcription factor; Gene","score_opus":0.02913999160897244,"score_gpt":0.4060370223884317,"score_spread":0.37689703077945924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888872758","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39633796,0.000105895284,0.60303354,0.000029382296,0.00009040079,0.00021988558,0.00003705529,0.0000017506464,0.0001441146],"genre_scores_gemma":[0.22116025,0.000007224712,0.7785904,0.00005674609,0.00002226737,0.00004315789,0.000079455865,0.000011439375,0.000029073743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980092,0.0009284248,0.0004587985,0.0003451017,0.00005571187,0.00020278426],"domain_scores_gemma":[0.99889153,0.00015547457,0.00033380225,0.00039342357,0.00020009531,0.000025679361],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016064083,0.00014178861,0.00037942355,0.00017459485,0.000049635215,0.000005319787,0.00041215096,0.00021753494,0.000015317513],"category_scores_gemma":[0.00055541546,0.00011025309,0.0002714356,0.00039351897,0.00034817468,0.0000013409682,0.00021850156,0.000069162124,1.59379e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003404917,0.00004435986,0.0032461165,0.000021818621,0.0004382108,6.674494e-8,0.00009937105,0.00089165184,0.9824872,0.0028328388,0.000004890442,0.009899411],"study_design_scores_gemma":[0.00030457406,0.00035012545,0.0021225302,0.0000108057075,0.00021536567,0.000001433667,0.000040985684,0.017850582,0.959398,0.018624155,0.00093936484,0.00014210948],"about_ca_topic_score_codex":0.00002289872,"about_ca_topic_score_gemma":0.000041130734,"teacher_disagreement_score":0.17555684,"about_ca_system_score_codex":0.000014635375,"about_ca_system_score_gemma":0.00008923105,"threshold_uncertainty_score":0.44959906},"labels":[],"label_agreement":null},{"id":"W2888900018","doi":"10.1007/978-1-4939-8651-4_28","title":"Systemic and ICV Injections of Antisense Oligos into SMA Mice and Evaluation","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research; Ministry of Education, India; Ministry of Earth Sciences","keywords":"SMA*; Chemistry; Pharmacology; Biology; Computer science; Algorithm","score_opus":0.03997114412849086,"score_gpt":0.4808754055578225,"score_spread":0.44090426142933165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888900018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8098405,0.003668274,0.18552347,0.00014071069,0.00006002281,0.0004184525,9.066628e-7,0.000005901237,0.00034174623],"genre_scores_gemma":[0.76920545,0.0003450969,0.23026375,0.0001077631,0.000018869263,0.00002714785,0.0000038819876,0.000009759638,0.000018272312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981981,0.0011402846,0.00019197725,0.00024749694,0.00008488874,0.00013727922],"domain_scores_gemma":[0.99946743,0.00010172737,0.000042251748,0.000183377,0.00015432328,0.00005090145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013397681,0.000077037585,0.00022431322,0.00021089872,0.00003085965,0.0000031541915,0.000037066588,0.00011104915,0.0000138738915],"category_scores_gemma":[0.00067140936,0.00006818593,0.000027509472,0.00021175883,0.0003544521,0.00000769149,0.00006858654,0.00010112657,0.0000011333806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039418985,0.000024830917,0.009900489,0.0000776471,0.000030729774,0.00000513042,0.00023731038,7.428861e-7,0.91561884,0.00030750767,0.0000039681618,0.073753394],"study_design_scores_gemma":[0.0029172583,0.0015351746,0.02235804,0.00014142694,0.00019908231,0.00073215907,0.00052327255,0.004795318,0.95949733,0.0063850163,0.0007337908,0.00018215363],"about_ca_topic_score_codex":0.00012863104,"about_ca_topic_score_gemma":0.000020398764,"teacher_disagreement_score":0.073571235,"about_ca_system_score_codex":0.000016189684,"about_ca_system_score_gemma":0.00006598891,"threshold_uncertainty_score":0.27805415},"labels":[],"label_agreement":null},{"id":"W2888908231","doi":"10.1007/7651_2018_191","title":"Preparation and Characterization of Simvastatin Nanocapsules: Encapsulation of Hydrophobic Drugs in Calcium Alginate","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Lipids, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute for Medical Research Development; Research Manitoba","keywords":"Nanocarriers; Chemistry; Nanocapsules; Drug delivery; Drug; Simvastatin; Emulsion; Micelle; Pharmacology; Nanotechnology; Materials science; Nanoparticle; Biochemistry; Organic chemistry; Aqueous solution","score_opus":0.011385242348059538,"score_gpt":0.3637378838521917,"score_spread":0.35235264150413215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2888908231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7646836,0.0003770148,0.23398961,0.000017481503,0.000608385,0.00018976594,0.000012857557,0.000002745848,0.00011851085],"genre_scores_gemma":[0.927403,0.00015622802,0.07178931,0.000060827948,0.000354073,0.000027552105,0.00014904831,0.000015095665,0.000044875007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984164,0.0006131709,0.00042593572,0.00032325834,0.000052904004,0.00016830326],"domain_scores_gemma":[0.9994084,0.000022275375,0.00021351271,0.00022937091,0.0000990831,0.000027308803],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074834283,0.00012622241,0.00027583574,0.00017191033,0.000014493572,0.0000032168778,0.00009199633,0.00020295734,0.0000075725247],"category_scores_gemma":[0.00011271082,0.00012915365,0.00004289667,0.00020813466,0.00023067216,0.000005417112,0.00006812215,0.000058523194,3.647015e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012021119,0.000036457615,0.0018585026,0.000030436095,0.000011817848,4.3708383e-8,0.00049888255,0.000012841712,0.9895689,0.00040857604,0.0000050042077,0.0074483347],"study_design_scores_gemma":[0.0006371232,0.00032097357,0.009647971,0.00002118674,0.0000106531215,0.0000023359019,0.000038626153,0.0006883912,0.9838893,0.00058846973,0.004035158,0.00011983897],"about_ca_topic_score_codex":0.000078877776,"about_ca_topic_score_gemma":0.000018147879,"teacher_disagreement_score":0.16271937,"about_ca_system_score_codex":0.0000117436975,"about_ca_system_score_gemma":0.00005659175,"threshold_uncertainty_score":0.52667326},"labels":[],"label_agreement":null},{"id":"W2889028385","doi":"10.1007/978-1-4939-8651-4_7","title":"Quantitative Evaluation of Exon Skipping in Immortalized Muscle Cells In Vitro","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research; National Center of Neurology and Psychiatry","keywords":"Exon skipping; Duchenne muscular dystrophy; Dystrophin; Medicine; Exon; Muscular dystrophy; Clinical trial; Bioinformatics; Computational biology; Pharmacology; Biology; Genetics; Internal medicine; Alternative splicing; Gene","score_opus":0.04445751645683005,"score_gpt":0.442468304607732,"score_spread":0.39801078815090196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889028385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89352304,0.00086130714,0.10405597,0.00002865287,0.0001756505,0.00031957836,0.0000062105937,0.0000033854797,0.0010262005],"genre_scores_gemma":[0.83302313,0.0000496418,0.16661163,0.00015477961,0.00001907758,0.000064539054,0.000059764385,0.000013216857,0.0000042448855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959278,0.0027675717,0.00044216574,0.00047688305,0.000080181846,0.00030538006],"domain_scores_gemma":[0.9993069,0.00008194042,0.00014058361,0.0003265767,0.00011705377,0.000026931868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029501738,0.00016005589,0.00032706044,0.00025376535,0.000017705075,0.0000024368999,0.00019554415,0.0003135071,0.000034393117],"category_scores_gemma":[0.0007975913,0.00016605802,0.00007773272,0.00033607899,0.00030392574,0.0000036804943,0.00010850036,0.00013779658,0.0000025331765],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041508698,0.00010870024,0.0010052026,0.000011244823,0.000017977225,0.0000019242323,0.00017093464,0.00026519282,0.98694444,0.00040039432,0.00000386866,0.010655021],"study_design_scores_gemma":[0.0017275588,0.00040223272,0.008565774,0.00001729808,0.000012190312,6.2738604e-7,0.00021859408,0.0025826523,0.978746,0.0073847226,0.00016596234,0.00017640216],"about_ca_topic_score_codex":0.00022992873,"about_ca_topic_score_gemma":0.0003383002,"teacher_disagreement_score":0.062555656,"about_ca_system_score_codex":0.000027665184,"about_ca_system_score_gemma":0.000101839156,"threshold_uncertainty_score":0.6771649},"labels":[],"label_agreement":null},{"id":"W2889177969","doi":"10.1007/978-1-4939-8651-4_32","title":"Morpholino-Mediated Exon Skipping Targeting Human ACVR1/ALK2 for Fibrodysplasia Ossificans Progressiva","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heterotopic Ossification and Related Conditions","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Fibrodysplasia ossificans progressiva; Morpholino; Myositis ossificans; Heterotopic ossification; Exon; Medicine; Ossification; Bioinformatics; Cancer research; Gene knockdown; Biology; Pathology; Genetics; Gene; Surgery","score_opus":0.0440539712513361,"score_gpt":0.4611845499549108,"score_spread":0.41713057870357473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889177969","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16745141,0.00027917424,0.82615465,0.0015845371,0.00044579932,0.0013733617,0.000020724345,0.00013943641,0.0025509093],"genre_scores_gemma":[0.2058875,0.000012196259,0.79176617,0.0008071196,0.0002741628,0.00040686718,0.00039110493,0.000039114082,0.00041575404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979829,0.00051820243,0.0005156414,0.00047309895,0.00007432738,0.00043578623],"domain_scores_gemma":[0.99900013,0.00019738094,0.00015333443,0.00036477603,0.00015702886,0.000127347],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008625152,0.00018581681,0.00036714575,0.00026384962,0.00017679426,0.000016006941,0.00015045557,0.00040667976,0.00022247482],"category_scores_gemma":[0.0009985031,0.00015902141,0.0001301482,0.00032486502,0.000365566,0.000023997763,0.000044533343,0.00032717647,0.000024844932],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003335905,0.000096545125,0.0026219233,0.0000429209,0.00006479035,0.000022771615,0.00023480861,0.0000011362017,0.98595893,0.0025069,0.00014992562,0.008265957],"study_design_scores_gemma":[0.005041824,0.0015407718,0.008819158,0.00030328074,0.00017735298,0.00011697256,0.00036027885,0.0035095415,0.8676241,0.0075354436,0.10432001,0.0006512808],"about_ca_topic_score_codex":0.000013714828,"about_ca_topic_score_gemma":0.000002500919,"teacher_disagreement_score":0.118334875,"about_ca_system_score_codex":0.000060586968,"about_ca_system_score_gemma":0.00007875315,"threshold_uncertainty_score":0.6484705},"labels":[],"label_agreement":null},{"id":"W2889188774","doi":"10.1007/978-1-4939-8651-4_36","title":"Exon Skipping Using Antisense Oligonucleotides for Laminin-Alpha2-Deficient Muscular Dystrophy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Nippon Shinyaku; National Center of Neurology and Psychiatry; Sarepta Therapeutics; Japan Agency for Medical Research and Development","keywords":"Laminin; Duchenne muscular dystrophy; Myogenesis; Congenital muscular dystrophy; Exon skipping; Muscular dystrophy; Morpholino; Exon; Biology; Dystrophin; Skeletal muscle; Molecular biology; mdx mouse; Cell biology; Extracellular matrix; Endocrinology; Biochemistry; Genetics; Gene; Zebrafish","score_opus":0.03027316427913046,"score_gpt":0.411918115245168,"score_spread":0.38164495096603757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889188774","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49314812,0.00052331924,0.5054244,0.000035901143,0.00032476813,0.00025929624,0.000011896805,0.0000135300925,0.00025875005],"genre_scores_gemma":[0.46167952,0.000047478265,0.5371978,0.000667886,0.00020819431,0.000048826845,0.00007507571,0.000043358115,0.00003182974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972208,0.0008531473,0.0004118626,0.0008212964,0.00006167194,0.000631214],"domain_scores_gemma":[0.9989594,0.00008203786,0.00014905652,0.0005855615,0.00014182155,0.00008212972],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010298109,0.00030346948,0.00039352462,0.00017659139,0.00016202904,0.000015004824,0.00031231908,0.00043742437,0.000020743704],"category_scores_gemma":[0.0006297049,0.00030337067,0.00022929074,0.0002241272,0.0005485862,0.000004156657,0.00022003416,0.00014406737,0.000004992031],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020980235,0.000080059566,0.000713457,0.000026719197,0.00007073237,0.000006539564,0.000053114236,0.000206075,0.99019414,0.0019619043,0.000033483782,0.0064439494],"study_design_scores_gemma":[0.0013973636,0.00117749,0.0008695914,0.000027464208,0.000048718673,0.000027566048,0.000118832104,0.0024253882,0.9763912,0.0049286233,0.012071501,0.0005162602],"about_ca_topic_score_codex":0.00004062355,"about_ca_topic_score_gemma":0.000013975021,"teacher_disagreement_score":0.031773433,"about_ca_system_score_codex":0.000023293109,"about_ca_system_score_gemma":0.00007834934,"threshold_uncertainty_score":0.9999418},"labels":[],"label_agreement":null},{"id":"W2889214184","doi":"10.1007/978-1-4939-8651-4_4","title":"Nusinersen in the Treatment of Spinal Muscular Atrophy","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research; Ministry of Education, India; Ministry of Earth Sciences","keywords":"SMN1; Spinal muscular atrophy; Antisense therapy; SMA*; Exon; Motor neuron; RNA splicing; Exon skipping; Medicine; Genetic enhancement; Biology; Alternative splicing; Gene; Genetics; Bioinformatics; Neuroscience; Disease; Oligonucleotide; Internal medicine; RNA","score_opus":0.12353671564480892,"score_gpt":0.5416256635370846,"score_spread":0.4180889478922757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889214184","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021723108,0.97427917,0.022898562,0.00006686834,0.00010920787,0.0018087889,0.0000058212486,0.0000056401273,0.0006087112],"genre_scores_gemma":[0.0000044345998,0.87421095,0.12524089,0.00007918867,0.000070775815,0.00026721132,0.000048066002,0.00003982955,0.000038613332],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9939616,0.0042067734,0.0006651338,0.0005689822,0.00017552299,0.00042201456],"domain_scores_gemma":[0.9985992,0.00019545328,0.0001583146,0.00093594124,0.000054306707,0.00005681951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012200264,0.00036920985,0.0018681675,0.0005602538,0.000018262439,0.000005150267,0.0003459955,0.00043722722,0.0000379805],"category_scores_gemma":[0.00024598776,0.00021194952,0.00084434665,0.0008040875,0.00039575706,0.0000043836158,0.00006506299,0.00032309303,0.000012425495],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004259883,0.00044351188,0.00003821631,0.0023108923,0.00020234843,0.00038496067,0.00007023554,3.0612404e-7,0.0006052937,0.00025767964,0.000008207235,0.99563575],"study_design_scores_gemma":[0.00088384247,0.002779052,0.00003193377,0.0011038362,0.00052647037,0.00016604093,0.000029774852,0.0000064433248,0.00020586171,0.00029385582,0.99380565,0.00016722259],"about_ca_topic_score_codex":0.00009113791,"about_ca_topic_score_gemma":0.000009613819,"teacher_disagreement_score":0.9954685,"about_ca_system_score_codex":0.00010210236,"about_ca_system_score_gemma":0.00029598476,"threshold_uncertainty_score":0.864305},"labels":[],"label_agreement":null},{"id":"W2889247263","doi":"10.1007/978-1-4939-8651-4_16","title":"Systemic Injection of Peptide-PMOs into Humanized DMD Mice and Evaluation by RT-PCR and ELISA","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Duchenne muscular dystrophy; Exon skipping; Morpholino; Exon; Medicine; Peptide; Cardiomyopathy; Molecular biology; Chemistry; Heart failure; Internal medicine; Biochemistry; Gene knockdown; Biology; Gene","score_opus":0.015538242520959585,"score_gpt":0.3825308926468831,"score_spread":0.3669926501259235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889247263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8425812,0.0041862866,0.15246317,0.000037818885,0.00012140514,0.0002756166,0.0000044590097,0.00000620219,0.00032380907],"genre_scores_gemma":[0.9397122,0.00023933519,0.059577405,0.00024106738,0.000049111273,0.000052361578,0.000087845125,0.00001486929,0.000025757434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99766976,0.0013560171,0.00028735262,0.0004531187,0.000052846728,0.00018092652],"domain_scores_gemma":[0.99940896,0.000051798,0.0001345628,0.0002372985,0.00012867946,0.000038690574],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013117052,0.00015372808,0.000248147,0.00008704862,0.000061718274,0.0000055272626,0.00010505232,0.00032125722,0.000014992236],"category_scores_gemma":[0.00043140817,0.00015066992,0.00003834928,0.00010404505,0.0004312411,0.0000038370013,0.00012596732,0.00009266533,9.372872e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015755779,0.000028149054,0.0024228075,0.000036653197,0.000041717205,2.2105154e-7,0.00014733941,0.000005003309,0.9813816,0.00023661646,0.000101802645,0.015440509],"study_design_scores_gemma":[0.0016911351,0.001280599,0.0019181635,0.000027839244,0.00005848007,0.000034532753,0.00028227823,0.00059627596,0.9844388,0.008458874,0.0009526327,0.0002604261],"about_ca_topic_score_codex":0.00011950577,"about_ca_topic_score_gemma":0.000052515916,"teacher_disagreement_score":0.097131014,"about_ca_system_score_codex":0.000013427494,"about_ca_system_score_gemma":0.000039060305,"threshold_uncertainty_score":0.6144141},"labels":[],"label_agreement":null},{"id":"W2889267042","doi":"10.1007/978-1-4939-8651-4_2","title":"An Overview of Recent Advances and Clinical Applications of Exon Skipping and Splice Modulation for Muscular Dystrophy and Various Genetic Diseases","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":58,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Exon skipping; Exon; Duchenne muscular dystrophy; Medicine; Myopathy; Antisense therapy; Muscular dystrophy; Alternative splicing; Bioinformatics; Genetics; Pathology; Biology; Internal medicine; Gene; Oligonucleotide","score_opus":0.0752195682599314,"score_gpt":0.5048456155383455,"score_spread":0.42962604727841414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889267042","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016336563,0.6891119,0.30843937,0.000003422996,0.000039064824,0.0007032682,0.000060808765,0.0000026670107,0.0000058213386],"genre_scores_gemma":[0.00015925417,0.7994238,0.19988225,0.000029707098,0.000052116873,0.00019343529,0.00023757809,0.000020992898,8.122825e-7],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971436,0.0012332035,0.0006940948,0.0007157409,0.000035051955,0.00017827428],"domain_scores_gemma":[0.99874794,0.00019668641,0.00043996403,0.00044990727,0.000090449634,0.000075025695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058830524,0.00025732775,0.0010013207,0.000108608,0.00004036369,0.0000036965325,0.00016052571,0.00050668715,0.0000023260682],"category_scores_gemma":[0.00027014193,0.00023092731,0.00016393575,0.000121282224,0.00055058603,0.000003854805,0.00014650005,0.00010134233,5.5193734e-8],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049836086,0.00009560843,0.00031273917,0.004703527,0.00013462231,3.0036185e-7,0.000007354653,0.0000053838176,0.0072981054,0.0002683648,0.0000010126392,0.98712313],"study_design_scores_gemma":[0.0019144868,0.003952951,0.0029114229,0.0012848399,0.0018859174,0.000034272467,0.000049477043,0.00046032938,0.0013121688,0.020100422,0.9650084,0.0010853303],"about_ca_topic_score_codex":0.000007677842,"about_ca_topic_score_gemma":0.000008161312,"teacher_disagreement_score":0.9860378,"about_ca_system_score_codex":0.0000053166154,"about_ca_system_score_gemma":0.0000802646,"threshold_uncertainty_score":0.94169426},"labels":[],"label_agreement":null},{"id":"W2889344236","doi":"10.1007/978-1-4939-8651-4_27","title":"In Vitro Evaluation of Antisense-Mediated Exon Inclusion for Spinal Muscular Atrophy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Spinal muscular atrophy; SMN1; SMA*; Antisense therapy; Morpholino; Exon; Molecular biology; Genetic enhancement; Cancer research; Exon skipping; RNA splicing; Blot; Oligonucleotide; Medicine; Biology; Locked nucleic acid; Chemistry; Alternative splicing; RNA; Pathology; Gene knockdown; Cell culture; Gene; Disease; Genetics","score_opus":0.06867375818795222,"score_gpt":0.5044668416205138,"score_spread":0.43579308343256157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889344236","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6277068,0.0013890855,0.36922428,0.00032387814,0.00012124523,0.0010508831,0.000003841942,0.0000062904724,0.00017364025],"genre_scores_gemma":[0.6001786,0.00006579366,0.39919683,0.00033545133,0.00004727958,0.00010531102,0.00004173161,0.000021264392,0.000007762327],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996879,0.0017389049,0.00038164103,0.00038955544,0.00028467216,0.00032624844],"domain_scores_gemma":[0.9990383,0.00012064732,0.00008109902,0.00034165257,0.00035852508,0.00005977079],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0040082466,0.00013292395,0.00040117424,0.0004624409,0.000041542393,0.0000021075089,0.00012588759,0.00020553598,0.000046661447],"category_scores_gemma":[0.0021111944,0.000120171215,0.0001344036,0.00048660205,0.00025665184,0.000013811894,0.00022871708,0.00016154649,0.0000030940262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007542429,0.00013181787,0.0005859597,0.00005994695,0.000026655676,0.000017151136,0.000093270224,0.0000054886345,0.92447317,0.00010594468,0.0000056455406,0.07374072],"study_design_scores_gemma":[0.004562777,0.0012826655,0.0027201197,0.000041638952,0.000074425174,0.000017157154,0.000035074285,0.008457015,0.97577274,0.005162427,0.0017595497,0.00011440074],"about_ca_topic_score_codex":0.0000694233,"about_ca_topic_score_gemma":0.000010580992,"teacher_disagreement_score":0.073626325,"about_ca_system_score_codex":0.000067688394,"about_ca_system_score_gemma":0.00018265196,"threshold_uncertainty_score":0.49004397},"labels":[],"label_agreement":null},{"id":"W2889364070","doi":"10.1007/978-1-4939-8585-2_2","title":"Imaging Platelets and Megakaryocytes by High-Resolution Laser Fluorescence Microscopy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Hospital for Sick Children","keywords":"Platelet; Fluorescence microscope; Immunofluorescence; Microscopy; Staining; Confocal microscopy; Fluorescence; Confocal; Megakaryocyte; Pathology; Biophysics; Chemistry; Antibody; Cell biology; Biology; Optics; Immunology; Medicine","score_opus":0.010564206200758437,"score_gpt":0.36250894838402736,"score_spread":0.35194474218326893,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889364070","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80419075,0.0030297406,0.19151406,0.00055160455,0.00015076615,0.00021460722,0.000011951559,0.000030738385,0.00030576735],"genre_scores_gemma":[0.30360383,0.00018747982,0.69521224,0.00081262685,0.000024966961,0.000017015996,0.000059456128,0.000017922053,0.00006444184],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988364,0.00026780626,0.00018413397,0.00036202613,0.00004611539,0.0003035174],"domain_scores_gemma":[0.99958736,0.00007234373,0.000047283884,0.00018877567,0.000035358767,0.00006891016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032109133,0.00015216124,0.00030819722,0.00010752959,0.00005253133,0.0000092523305,0.00006128374,0.00011868229,0.000032492877],"category_scores_gemma":[0.00014859252,0.00012828184,0.00003205689,0.00013906896,0.0002974168,0.000027361672,0.00006205549,0.00012634862,0.000010774885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000116968906,0.00007604002,0.015216994,0.000011396506,0.00003733831,0.00022362656,0.000042171992,2.0833616e-7,0.9523627,0.00017745017,0.0002398992,0.031495195],"study_design_scores_gemma":[0.0020803993,0.00033105598,0.0033064503,0.000041796433,0.000043817126,0.00019559007,0.000017705539,0.0006634661,0.9862086,0.0036988393,0.00325465,0.00015762234],"about_ca_topic_score_codex":0.00021442218,"about_ca_topic_score_gemma":0.0000073555566,"teacher_disagreement_score":0.5036982,"about_ca_system_score_codex":0.000036050285,"about_ca_system_score_gemma":0.000021317648,"threshold_uncertainty_score":0.5231182},"labels":[],"label_agreement":null},{"id":"W2889367200","doi":"10.1007/978-1-4939-8651-4_23","title":"In Vivo Evaluation of Multiple Exon Skipping with Peptide-PMOs in Cardiac and Skeletal Muscles in Dystrophic Dogs","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Exon skipping; Exon; Morpholino; Duchenne muscular dystrophy; Muscular dystrophy; Medicine; Exon trapping; Dystrophin; Alternative splicing; Biology; Genetics; Gene knockdown; Gene; Internal medicine","score_opus":0.018670150884756626,"score_gpt":0.36248096613016867,"score_spread":0.343810815245412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889367200","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98301405,0.0010886623,0.015017017,0.000049813214,0.00008598491,0.00039927402,0.0000056607823,0.0000029155854,0.00033662125],"genre_scores_gemma":[0.9514044,0.000100804675,0.048225794,0.000098838915,0.000031849962,0.00009619693,0.000022529737,0.000015156011,0.0000044224944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966711,0.0020655012,0.00035960542,0.0005150585,0.00007794261,0.00031078787],"domain_scores_gemma":[0.99943274,0.000081721766,0.00010134844,0.0002807653,0.00007264371,0.000030774987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021482967,0.00017971642,0.00037008818,0.0002665754,0.000018150875,0.0000032225626,0.00013216148,0.00031576602,0.000014348916],"category_scores_gemma":[0.00055111333,0.00017022049,0.00004802747,0.00028209024,0.00037933685,0.0000063532016,0.000110610206,0.00016823565,4.2618524e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020330808,0.000071120456,0.08608069,0.000021532109,0.000018322837,0.00000422554,0.0001650115,0.0003203459,0.9070536,0.00013142069,0.0000026042817,0.0059278198],"study_design_scores_gemma":[0.0055761356,0.0013594344,0.20219731,0.00011294769,0.000033318487,0.00000877913,0.00047328568,0.00335133,0.7797537,0.0061382875,0.00046981557,0.00052566896],"about_ca_topic_score_codex":0.00059207156,"about_ca_topic_score_gemma":0.0021311515,"teacher_disagreement_score":0.12729992,"about_ca_system_score_codex":0.000028242432,"about_ca_system_score_gemma":0.000084457555,"threshold_uncertainty_score":0.694139},"labels":[],"label_agreement":null},{"id":"W2889393717","doi":"10.1007/978-1-4939-8651-4_5","title":"Tips to Design Effective Splice-Switching Antisense Oligonucleotides for Exon Skipping and Exon Inclusion","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research; Ministry of Education, India; Ministry of Earth Sciences","keywords":"Exon; Exon skipping; Spinal muscular atrophy; Duchenne muscular dystrophy; Muscular dystrophy; Limb-girdle muscular dystrophy; Dystrophin; mdx mouse; RNA splicing; Splice site mutation; Dysferlin; Medicine; Alternative splicing; Genetics; Biology; Mutation; Gene; RNA","score_opus":0.041243641048730045,"score_gpt":0.46261569282538295,"score_spread":0.42137205177665293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889393717","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3658861,0.00066560286,0.63149565,0.00030680257,0.00007120927,0.0014309733,9.2932896e-7,0.000018208011,0.00012454206],"genre_scores_gemma":[0.2096294,0.00010138121,0.7888898,0.0011021972,0.000066886016,0.00015142525,0.0000034153902,0.000035708283,0.00001975006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997411,0.0012811259,0.00023239311,0.0005473806,0.000099009674,0.00042905108],"domain_scores_gemma":[0.9988023,0.00060273363,0.00004495283,0.0002932851,0.0001110978,0.00014564567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002313307,0.00018020463,0.000391943,0.0003276255,0.00018326336,0.000009224548,0.00011187885,0.00016432522,0.000012191826],"category_scores_gemma":[0.0017891193,0.00015799954,0.00007675638,0.00028784032,0.00013685602,0.000016062726,0.00053246587,0.00018665855,0.0000058154983],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031982097,0.000037759564,0.0007593694,0.000052139236,0.000030984163,0.000027776334,0.00048667012,0.0000044740186,0.7503772,0.00013673477,0.00001929694,0.24774782],"study_design_scores_gemma":[0.0018807175,0.0025766534,0.0032428575,0.00013267837,0.000055589746,0.00011211319,0.00012106316,0.002994173,0.9785087,0.0059575494,0.0041949665,0.00022292315],"about_ca_topic_score_codex":0.000037724625,"about_ca_topic_score_gemma":0.000010380166,"teacher_disagreement_score":0.24752489,"about_ca_system_score_codex":0.000040989133,"about_ca_system_score_gemma":0.00004483453,"threshold_uncertainty_score":0.64430344},"labels":[],"label_agreement":null},{"id":"W2889425597","doi":"10.1007/978-1-4939-8651-4_8","title":"Direct Reprogramming of Human DMD Fibroblasts into Myotubes for In Vitro Evaluation of Antisense-Mediated Exon Skipping and Exons 45–55 Skipping Accompanied by Rescue of Dystrophin Expression","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Exon skipping; Dystrophin; Exon; Duchenne muscular dystrophy; Myogenesis; Biology; Medicine; Bioinformatics; Alternative splicing; Molecular biology; Genetics; Gene","score_opus":0.026343333758463004,"score_gpt":0.40308126890916685,"score_spread":0.37673793515070386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889425597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9236561,0.0014059722,0.074280545,0.000016141781,0.000062420986,0.00048954575,0.000018290193,0.0000056368476,0.000065368185],"genre_scores_gemma":[0.86324996,0.000045364697,0.13638936,0.000020147203,0.000022137592,0.000064212334,0.00018907007,0.00001764559,0.0000020704138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99692166,0.0015348068,0.0006352018,0.00054082065,0.00009194944,0.0002755906],"domain_scores_gemma":[0.998904,0.00016947668,0.00029428917,0.0003787825,0.00021493029,0.000038528648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022724268,0.00018954942,0.00051397085,0.00021389691,0.000049599832,0.000003183687,0.0001769436,0.00035935018,0.000004789022],"category_scores_gemma":[0.001548794,0.00018785239,0.0000962762,0.00020643958,0.00047841432,0.000006339905,0.00016804467,0.00010035307,8.04452e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000505518,0.00010941561,0.001084084,0.000117313146,0.000043663676,3.629474e-7,0.0002458828,0.00005022223,0.9868019,0.000036877125,0.000008902206,0.010995848],"study_design_scores_gemma":[0.0015299168,0.0006132677,0.0014461377,0.000112675305,0.000029763944,0.0000011591375,0.00019007952,0.00071021914,0.9939444,0.0012151933,0.000044459266,0.00016269331],"about_ca_topic_score_codex":0.00016177955,"about_ca_topic_score_gemma":0.000064488944,"teacher_disagreement_score":0.06210882,"about_ca_system_score_codex":0.000015692343,"about_ca_system_score_gemma":0.000054879984,"threshold_uncertainty_score":0.76603985},"labels":[],"label_agreement":null},{"id":"W2889462798","doi":"10.1007/978-1-4939-8651-4_9","title":"In Vitro Multiexon Skipping by Antisense PMOs in Dystrophic Dog and Exon 7-Deleted DMD Patient","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institutes of Health","keywords":"Exon skipping; Exon; Duchenne muscular dystrophy; Morpholino; Dystrophin; Myogenesis; Molecular biology; Biology; Muscular dystrophy; Antisense therapy; Cell biology; Chemistry; Alternative splicing; Genetics; Myocyte; Gene knockdown; Cell culture; Oligonucleotide; Gene","score_opus":0.008910248923750346,"score_gpt":0.3443169859649195,"score_spread":0.33540673704116913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889462798","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9405754,0.0016359853,0.05689251,0.00015117726,0.00020285785,0.000301882,0.000012792016,0.000008220295,0.00021912507],"genre_scores_gemma":[0.91508096,0.00019880293,0.08342998,0.0010620033,0.000039664654,0.000059128157,0.000091461225,0.000024116156,0.000013906278],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968877,0.0014404581,0.00041721686,0.0007121946,0.00004716328,0.0004952574],"domain_scores_gemma":[0.99938244,0.00006414547,0.000101962374,0.0003489272,0.000038406917,0.00006412048],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006027912,0.0002512076,0.0003648109,0.00020413374,0.00004038811,0.0000071355325,0.0001642488,0.00047761563,0.00001362964],"category_scores_gemma":[0.00036429503,0.00025363642,0.000058131143,0.00024583327,0.00038058046,0.0000050461535,0.00020288766,0.000249984,0.0000026624007],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038040875,0.000108,0.0020821134,0.0000133597,0.000017065468,0.000025570022,0.00009787322,0.000015876705,0.9814402,0.000055635195,0.000041810996,0.015722115],"study_design_scores_gemma":[0.0017278271,0.0007210287,0.0019198116,0.000018542018,0.0000058717123,0.000014584737,0.00008585557,0.00058199256,0.99046016,0.0013130637,0.0028242778,0.00032699358],"about_ca_topic_score_codex":0.00023126112,"about_ca_topic_score_gemma":0.000082363345,"teacher_disagreement_score":0.026537467,"about_ca_system_score_codex":0.000024706009,"about_ca_system_score_gemma":0.000034252593,"threshold_uncertainty_score":0.9999916},"labels":[],"label_agreement":null},{"id":"W2889479076","doi":"10.1007/978-1-4939-8651-4_10","title":"Creation of DMD Muscle Cell Model Using CRISPR-Cas9 Genome Editing to Test the Efficacy of Antisense-Mediated Exon Skipping","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research; Alberta Innovates","keywords":"Exon skipping; Duchenne muscular dystrophy; Genome editing; Exon; CRISPR; Dystrophin; Biology; Mutation; Cell culture; Cancer research; Gene; Molecular biology; Genetics; Alternative splicing","score_opus":0.021384216357327873,"score_gpt":0.4095568078614546,"score_spread":0.38817259150412675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889479076","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46237835,0.00029689583,0.5368874,0.000020998426,0.00008301866,0.00014970836,0.000010677648,0.000004402231,0.00016853657],"genre_scores_gemma":[0.6356558,0.000024024092,0.36407837,0.00007465965,0.00010995843,0.000006240028,0.00002165553,0.000020420284,0.000008854922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855,0.00027622472,0.00043842706,0.00035991182,0.0000748335,0.00030057886],"domain_scores_gemma":[0.9990594,0.00015390139,0.00015284884,0.0004336881,0.0001481459,0.00005203287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008700427,0.00017217947,0.00026987103,0.00013720595,0.00004636549,0.0000056929925,0.00024521572,0.00020172537,0.000006362313],"category_scores_gemma":[0.0011404038,0.00015327231,0.000093972194,0.00028650608,0.0001483984,0.0000020681475,0.00019095383,0.00010570127,9.781785e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019368552,0.0000577714,0.0004624207,0.0000255984,0.000016112877,0.0000012449626,0.00020223671,0.022359617,0.97472626,0.000019048359,0.000003854073,0.0021064891],"study_design_scores_gemma":[0.00038076224,0.00033324127,0.001156746,0.000022597134,0.000025004678,0.000004803209,0.00008586649,0.025523338,0.9718384,0.000083760635,0.00039434124,0.00015115067],"about_ca_topic_score_codex":0.000046920395,"about_ca_topic_score_gemma":0.000011827189,"teacher_disagreement_score":0.17327747,"about_ca_system_score_codex":0.00001556121,"about_ca_system_score_gemma":0.000048051545,"threshold_uncertainty_score":0.62502635},"labels":[],"label_agreement":null},{"id":"W2889530907","doi":"10.1007/978-1-4939-8651-4_17","title":"In Vivo Evaluation of Single-Exon and Multiexon Skipping in mdx52 Mice","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Japan Agency for Medical Research and Development","keywords":"Exon skipping; Exon; Morpholino; Duchenne muscular dystrophy; In vivo; RNA splicing; Medicine; Oligonucleotide; Alternative splicing; Pharmacology; Computational biology; Bioinformatics; Gene; Genetics; Biology; RNA; Internal medicine; Gene knockdown","score_opus":0.03609506866831307,"score_gpt":0.4127772378265778,"score_spread":0.37668216915826475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889530907","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9386835,0.0012514857,0.05851047,0.0000735356,0.00015109158,0.0002496411,0.000002743734,0.0000026669532,0.0010748311],"genre_scores_gemma":[0.899625,0.000061545055,0.099899806,0.00030849795,0.000033891614,0.000036506575,0.000014141913,0.0000115162775,0.000009073521],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972354,0.00169664,0.00033264272,0.00042975805,0.00005694523,0.00024859497],"domain_scores_gemma":[0.99949694,0.00006567746,0.00009743077,0.00023352866,0.00008066275,0.000025792859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002071875,0.00013884206,0.00024656468,0.00020586498,0.000016160786,0.0000025388144,0.00012852876,0.0003262289,0.000026911124],"category_scores_gemma":[0.0008528789,0.00014495077,0.000038617854,0.00020730328,0.0002853656,0.000004067004,0.00011639151,0.00010882941,6.49318e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015361713,0.00011360964,0.006029857,0.000014102405,0.000011319106,0.0000013216958,0.00012930925,0.00008057548,0.9834721,0.0002000591,0.000008024987,0.009786079],"study_design_scores_gemma":[0.001947654,0.0004267985,0.005743105,0.000025685697,0.000011455836,0.0000036719855,0.00011319283,0.0015107039,0.9841421,0.00537713,0.000525579,0.00017290785],"about_ca_topic_score_codex":0.00017918024,"about_ca_topic_score_gemma":0.0005246852,"teacher_disagreement_score":0.04138933,"about_ca_system_score_codex":0.000023343764,"about_ca_system_score_gemma":0.00004879191,"threshold_uncertainty_score":0.59109205},"labels":[],"label_agreement":null},{"id":"W2889641340","doi":"10.1007/978-1-4939-8645-3_15","title":"Methods for Assessing Serpins as Neuroprotective Therapeutics","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spinal Cord Injury Research","field":"Medicine","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Neuroprotection; Medicine; Pharmacology","score_opus":0.15692264950292917,"score_gpt":0.621193665487083,"score_spread":0.4642710159841538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889641340","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03467837,0.0004567275,0.9588162,0.0010207111,0.0003495969,0.001034269,0.0000019250053,0.000052406645,0.0035898127],"genre_scores_gemma":[0.009714699,0.000019390092,0.98657256,0.0030979137,0.00017381068,0.00018985689,0.00000611702,0.000056594006,0.00016904743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99492854,0.0035587538,0.00032723043,0.00055517245,0.00009627341,0.0005340214],"domain_scores_gemma":[0.9981083,0.00080158125,0.0000880904,0.0005258234,0.00037807625,0.00009810568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041994536,0.00020297825,0.00047072678,0.00033994406,0.00009223829,0.000024001816,0.00023556473,0.00028703242,0.00007063371],"category_scores_gemma":[0.0035329498,0.00017274027,0.00014632335,0.00059393304,0.00041610992,0.000034952784,0.00014912248,0.0005074453,0.000015435055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005266516,0.00004345841,0.00044355792,0.000020260683,0.00005410788,0.000013760862,0.00003962467,2.0336725e-7,0.6799701,0.0017243134,0.000003115325,0.31716087],"study_design_scores_gemma":[0.000958803,0.0056268037,0.0013921882,0.000033054184,0.00006966254,0.00010648656,0.00009272036,0.0024049338,0.92026764,0.039642077,0.029217888,0.0001877258],"about_ca_topic_score_codex":0.00004440393,"about_ca_topic_score_gemma":0.000002058521,"teacher_disagreement_score":0.31697315,"about_ca_system_score_codex":0.000108509346,"about_ca_system_score_gemma":0.00021709959,"threshold_uncertainty_score":0.70441437},"labels":[],"label_agreement":null},{"id":"W2889790527","doi":"10.1007/978-1-4939-8730-6_5","title":"Inducible Protein Production in 293 Cells Using the piggyBac Transposon System","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"","keywords":"Transposable element; Transgene; Cell culture; Cell biology; Computational biology; Biology; Protein expression; Computer science; Genetics; Gene; Mutant","score_opus":0.02531995318890794,"score_gpt":0.3758752990107363,"score_spread":0.35055534582182835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2889790527","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77908486,0.0006205039,0.21853699,0.00007758989,0.0006866397,0.00058461603,0.0000051183224,0.000016450129,0.0003872594],"genre_scores_gemma":[0.8997529,0.000019557134,0.09947809,0.0001645211,0.0003291016,0.00013319711,0.000013993976,0.000029874727,0.00007875603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969887,0.0015977955,0.0003515625,0.0006170932,0.00007218103,0.00037267187],"domain_scores_gemma":[0.99918276,0.000012978193,0.0001121165,0.0005648614,0.00007697798,0.0000502961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001174846,0.00020527795,0.0002207395,0.00013102399,0.00010981485,0.000017012158,0.00026293495,0.00031229664,0.000013612277],"category_scores_gemma":[0.00015963154,0.00015764454,0.00010162867,0.00036585247,0.00023226859,0.000004333561,0.00010114787,0.00020245479,0.000004192622],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009432074,0.000061708255,0.00088158343,0.000033333847,0.000018572498,0.0000054013585,0.000070902715,0.00034961724,0.99626994,0.00022889186,0.00003666922,0.0019490839],"study_design_scores_gemma":[0.00033575113,0.00034432835,0.00013514808,0.000066182205,0.000011613755,0.00001796038,0.00011891761,0.00033182753,0.9956669,0.0005269771,0.0022472322,0.0001971492],"about_ca_topic_score_codex":0.00021712233,"about_ca_topic_score_gemma":0.00007545188,"teacher_disagreement_score":0.12066808,"about_ca_system_score_codex":0.000051181316,"about_ca_system_score_gemma":0.000082288956,"threshold_uncertainty_score":0.64285576},"labels":[],"label_agreement":null},{"id":"W2890351601","doi":"10.1007/978-1-4939-8730-6_1","title":"Transient Gene Expression in Suspension HEK293-EBNA1 Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"HEK 293 cells; Transfection; Recombinant DNA; Polyethylenimine; Molecular biology; Cell culture; Gene; Embryo; Gene expression; Chemistry; Biology; Cell biology; Biochemistry; Genetics","score_opus":0.020399379752752023,"score_gpt":0.36411609672702017,"score_spread":0.34371671697426814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890351601","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5746168,0.0006132025,0.4235423,0.00005657742,0.0003541748,0.0001768156,0.0000044937233,0.000007124333,0.00062852923],"genre_scores_gemma":[0.49316102,0.00026434788,0.5053217,0.00079994614,0.00015785056,0.000041926454,0.00006505315,0.000030231307,0.00015792905],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975291,0.0009137691,0.0003855569,0.0006673218,0.00006897356,0.00043529822],"domain_scores_gemma":[0.99924403,0.000028285784,0.00007288921,0.00050919806,0.00007596583,0.00006965053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008210014,0.00022471594,0.000289596,0.00018371489,0.000035974554,0.000010085101,0.00031870263,0.0004022374,0.00006204149],"category_scores_gemma":[0.00011001139,0.00020689369,0.0001066628,0.00020012163,0.00019323871,0.0000032512046,0.00017910228,0.00017428497,0.000023447798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015403447,0.00007393443,0.00083716237,0.00000558672,0.000010106419,0.0000265457,0.00008819034,0.000041947886,0.9922813,0.000033612512,0.00016813404,0.006279447],"study_design_scores_gemma":[0.00060221733,0.0006401628,0.00052530004,0.000025902882,0.0000051872125,0.000013792032,0.00004586373,0.000109886525,0.98961353,0.0005910739,0.0075846734,0.0002424092],"about_ca_topic_score_codex":0.000047883346,"about_ca_topic_score_gemma":0.00010103655,"teacher_disagreement_score":0.081779405,"about_ca_system_score_codex":0.000023885223,"about_ca_system_score_gemma":0.000049739076,"threshold_uncertainty_score":0.843688},"labels":[],"label_agreement":null},{"id":"W2890556596","doi":"10.1007/978-1-4939-8712-2_18","title":"Isolation of Human Skin Lymphatic Endothelial Cells and 3D Reconstruction of the Lymphatic Vasculature In Vitro","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lymphatic System and Diseases","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Lymphatic system; Lymphangiogenesis; Lymphatic Endothelium; Lymphatic vessel; Vascular endothelial growth factor C; Pathology; Endothelium; Biology; In vitro; Cell biology; Medicine; Cancer research; Vascular endothelial growth factor A; Cancer; Vascular endothelial growth factor; VEGF receptors; Endocrinology; Metastasis","score_opus":0.013939173079365255,"score_gpt":0.34461134067399957,"score_spread":0.3306721675946343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890556596","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92560345,0.000516344,0.07243981,0.000033725984,0.0002946117,0.0004210829,0.0000085002375,0.0000063298876,0.0006761511],"genre_scores_gemma":[0.8199809,0.000010638179,0.17983979,0.00008252174,0.00004480025,0.000012384852,0.0000040060268,0.000009172526,0.000015765867],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980245,0.0010842088,0.00045464883,0.00021294612,0.00008288839,0.00014079172],"domain_scores_gemma":[0.9992269,0.00017126939,0.00020285006,0.0002986021,0.00006760355,0.000032772583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007409841,0.00011220758,0.00040862098,0.00018786204,0.00002248953,0.0000027908175,0.0000792831,0.00015938451,0.000016456921],"category_scores_gemma":[0.00038294747,0.000078929705,0.00008885677,0.00026330093,0.0003649575,0.000021708758,0.00004543097,0.000019697069,6.893968e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094646995,0.000057770434,0.024770267,0.0001399971,0.000031936,0.0000018334113,0.00029233057,0.0000018698897,0.95850694,0.0003009191,7.935803e-7,0.01580069],"study_design_scores_gemma":[0.0022969279,0.00017136076,0.020298298,0.00018800716,0.00009362313,0.00005304131,0.000141974,0.0009603599,0.97186095,0.003844613,0.000013538785,0.00007730924],"about_ca_topic_score_codex":0.00014182003,"about_ca_topic_score_gemma":0.000011733464,"teacher_disagreement_score":0.10739998,"about_ca_system_score_codex":0.00005332303,"about_ca_system_score_gemma":0.00008278416,"threshold_uncertainty_score":0.321866},"labels":[],"label_agreement":null},{"id":"W2890651839","doi":"10.1007/978-1-4939-8706-1_10","title":"A Method to Monitor Protein Turnover by Flow Cytometry and to Screen for Factors that Control Degradation by Fluorescence-Activated Cell Sorting","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Flow cytometry; Protein degradation; Protein turnover; Cell sorting; Sorting; Protein quality; Proteasome; Cell biology; Proteome; Degradation (telecommunications); Ubiquitin; Green fluorescent protein; Chemistry; Computational biology; Computer science; Biology; Biochemistry; Protein biosynthesis; Molecular biology; Gene","score_opus":0.02122087137244844,"score_gpt":0.35421224999879736,"score_spread":0.3329913786263489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890651839","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33627042,0.00022972503,0.6618821,0.00012785457,0.00005967003,0.0011661486,0.00019787769,0.000015035483,0.000051154868],"genre_scores_gemma":[0.26835087,0.000003556396,0.73042965,0.00049506617,0.000070764705,0.00029512166,0.00019796415,0.000041375853,0.00011562073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99717385,0.0010556903,0.0003388376,0.00079437724,0.00009559583,0.00054167496],"domain_scores_gemma":[0.9990675,0.00013010441,0.00014220597,0.00032781195,0.00012424991,0.00020811839],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014311676,0.00031460295,0.0003836424,0.00016534032,0.00010301216,0.000035855675,0.00027286125,0.0004138565,0.000013241602],"category_scores_gemma":[0.000725924,0.00028845688,0.000089129644,0.0002785121,0.00009024566,0.000006503303,0.00015910126,0.00015234282,0.0000024334443],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003020924,0.000042691336,0.0013305508,0.000018933179,0.000039196326,6.3186945e-7,0.00007027908,0.0000031750376,0.96266425,0.00001838163,0.00030858704,0.035201255],"study_design_scores_gemma":[0.0009519806,0.001202739,0.00012270632,0.000019028812,0.000016926626,0.0000021782557,0.00006586683,0.00025446905,0.98584217,0.00020370913,0.010962853,0.00035538178],"about_ca_topic_score_codex":0.000106674735,"about_ca_topic_score_gemma":0.000007699391,"teacher_disagreement_score":0.06854755,"about_ca_system_score_codex":0.000032909513,"about_ca_system_score_gemma":0.000033975866,"threshold_uncertainty_score":0.9999568},"labels":[],"label_agreement":null},{"id":"W2890752663","doi":"10.1007/978-1-4939-8648-4_21","title":"Fc Engineering: Tailored Synthetic Human IgG1-Fc Repertoire for High-Affinity Interaction with FcRn at pH 6.0","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Natural Science Foundation of China","keywords":"Fragment crystallizable region; Neonatal Fc receptor; Antibody; Effector; Protein engineering; Chemistry; Affinities; Immunoglobulin Fc Fragments; Binding affinities; Receptor; Immunoglobulin G; Affinity maturation; Immune system; Cell biology; Mutant; Biophysics; Molecular biology; Computational biology; Immunology; Biochemistry; Biology; Enzyme","score_opus":0.04075257535647589,"score_gpt":0.43206696826200286,"score_spread":0.39131439290552694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2890752663","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79318744,0.0002303804,0.20297046,0.0016820552,0.00028877397,0.00058716064,0.000017880511,0.000055559263,0.0009803186],"genre_scores_gemma":[0.4959116,0.00002239006,0.5015136,0.00043922281,0.00026749843,0.0001534418,0.00015576999,0.000048167978,0.0014883457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983156,0.00036342282,0.00030156714,0.00046946012,0.00011648951,0.00043351596],"domain_scores_gemma":[0.99893326,0.0003557933,0.000074885145,0.00037152204,0.00014741966,0.000117139156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076930237,0.00021091118,0.0004372307,0.00022065516,0.00011415852,0.0000094018515,0.00015093911,0.00019554578,0.00020739045],"category_scores_gemma":[0.00061055145,0.00015555986,0.00010468723,0.00020149049,0.00028362393,0.000022160038,0.00012969671,0.00029349493,0.000027624445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019067168,0.00010838201,0.0015840334,0.000102901795,0.0001212694,0.00006593828,0.00011063661,0.0000100053185,0.9836303,0.0033475186,0.00013232444,0.0088799475],"study_design_scores_gemma":[0.0017494373,0.0058725313,0.0024794282,0.00015855818,0.0000791092,0.0002660692,0.000042869717,0.0019126766,0.93250257,0.0019392027,0.05266157,0.00033598463],"about_ca_topic_score_codex":0.00017688995,"about_ca_topic_score_gemma":0.000098634046,"teacher_disagreement_score":0.29854313,"about_ca_system_score_codex":0.000118398995,"about_ca_system_score_gemma":0.000041655458,"threshold_uncertainty_score":0.6343547},"labels":[],"label_agreement":null},{"id":"W2891792998","doi":"10.1007/978-1-4939-8645-3_3","title":"Serpin Phage Display: The Use of a T7 System to Probe Reactive Center Loop Libraries with Different Serine Proteinases","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Canadian Blood Services; University of Toronto","funders":"","keywords":"Serpin; Phage display; Bacteriophage; Protein engineering; Hypervariable region; Capsid; Biology; Computational biology; Phagemid; Molecular biology; Virus; Biochemistry; Genetics; Escherichia coli; Antibody; Enzyme","score_opus":0.05803383427505731,"score_gpt":0.3992068671911623,"score_spread":0.34117303291610496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891792998","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.757968,0.00015742742,0.23833248,0.0018216297,0.000060560094,0.0013308905,0.00003777052,0.000021070806,0.00027013314],"genre_scores_gemma":[0.38267875,0.000018432276,0.6147123,0.0009095333,0.000121973506,0.00037761484,0.000045027988,0.000042399926,0.0010939768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789804,0.001007215,0.00027364248,0.00033145747,0.00015129958,0.0003383408],"domain_scores_gemma":[0.9990276,0.00027077433,0.00008144545,0.00038799053,0.00013087557,0.000101284495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035257018,0.00019282954,0.0004583838,0.00013306658,0.00005263309,0.000015495703,0.00017574409,0.000090591224,0.000028382681],"category_scores_gemma":[0.00025893675,0.00009420717,0.00007061442,0.00029060905,0.00047320867,0.00003647621,0.00025583614,0.00022805974,0.0000047500102],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0046631657,0.00031927557,0.041087512,0.00044067958,0.00025846783,0.00021251035,0.0005686879,0.0000031484499,0.9309732,0.011493623,0.00006011244,0.009919658],"study_design_scores_gemma":[0.00096788985,0.0035061887,0.01587295,0.0004925175,0.00004445548,0.00019545446,0.00017561145,0.00045050468,0.96442556,0.00020697709,0.013482178,0.00017968995],"about_ca_topic_score_codex":0.0002979151,"about_ca_topic_score_gemma":0.00005608013,"teacher_disagreement_score":0.37637982,"about_ca_system_score_codex":0.000036278267,"about_ca_system_score_gemma":0.000060411217,"threshold_uncertainty_score":0.3841657},"labels":[],"label_agreement":null},{"id":"W2891834190","doi":"10.1007/978-1-4939-8706-1_22","title":"Exploring the Rampant Expansion of Ubiquitin Proteomics","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research; Michael Smith Health Research BC","keywords":"Ubiquitin; Ubiquitin ligase; Proteomics; Proteasome; Cell biology; Deubiquitinating enzyme; Computational biology; Biology; Ubiquitin-Protein Ligases; Quantitative proteomics; Ubiquitin-conjugating enzyme; Gene; Genetics","score_opus":0.15974148550587564,"score_gpt":0.4281863203637513,"score_spread":0.2684448348578757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891834190","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005602976,0.7999634,0.19726412,0.000014237265,0.000460069,0.0013369225,0.000043476557,0.000012399454,0.00034507387],"genre_scores_gemma":[0.000008347882,0.71297085,0.28564665,0.00006064294,0.00023721933,0.00081109477,0.00014940329,0.00007017386,0.00004559042],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9937208,0.0038490254,0.0009786774,0.0008190904,0.00010904126,0.0005233479],"domain_scores_gemma":[0.99791604,0.00017865842,0.00054268865,0.0011909734,0.000100969344,0.00007065671],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003117129,0.00052574906,0.0013410648,0.00020842218,0.00006658625,0.000014547149,0.000928064,0.0006601921,0.000010841806],"category_scores_gemma":[0.00095774466,0.00035894875,0.00060934055,0.00035482284,0.00043145393,0.0000028626234,0.00067314896,0.0004983841,0.0000133875865],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003029077,0.000038278,0.0000030954582,0.0020959172,0.00013850177,0.00000784302,0.000061466766,0.000001377893,0.23256171,0.00068035326,0.000028698336,0.7643525],"study_design_scores_gemma":[0.00014929404,0.0003245218,6.7416016e-7,0.0011668436,0.000101682825,0.00004075835,0.000019611864,0.000003197668,0.33906305,0.00045181825,0.6583529,0.00032562343],"about_ca_topic_score_codex":0.000019629722,"about_ca_topic_score_gemma":0.000004708851,"teacher_disagreement_score":0.7640268,"about_ca_system_score_codex":0.000033358676,"about_ca_system_score_gemma":0.0003200976,"threshold_uncertainty_score":0.9998863},"labels":[],"label_agreement":null},{"id":"W2891998698","doi":"10.1007/978-1-4939-8706-1_8","title":"Generating Intracellular Modulators of E3 Ligases and Deubiquitinases from Phage-Displayed Ubiquitin Variant Libraries","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Ubiquitin; Biology; Ubiquitin-Protein Ligases; Cell biology; Ubiquitin ligase; Computational biology; Target protein; Phage display; Ubiquitins; Deubiquitinating enzyme; Biochemistry; Gene","score_opus":0.017923009254083706,"score_gpt":0.3234353911762407,"score_spread":0.305512381922157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2891998698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6494715,0.003996558,0.3457645,0.000046293997,0.0001363717,0.00019563528,0.000072595656,0.00001646736,0.0003001024],"genre_scores_gemma":[0.5032331,0.00010180214,0.49585322,0.00034114817,0.00024330815,0.0000362421,0.00012586075,0.00003340141,0.000031958705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969035,0.0012645461,0.00056846376,0.0007313932,0.00008978387,0.00044232194],"domain_scores_gemma":[0.9988654,0.00016866077,0.00022955753,0.00052047306,0.00009987663,0.000115985764],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009516288,0.00031944236,0.0004719128,0.00013754169,0.00009877433,0.00003412122,0.00031768286,0.00041894603,0.00007895233],"category_scores_gemma":[0.00091275695,0.00030930009,0.0001053536,0.00018526378,0.0006531903,0.000008892342,0.00043124534,0.00017799062,0.0000025580287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109271794,0.000059916892,0.0017877773,0.000027212443,0.000078735204,0.000029853869,0.0002127017,0.000023536184,0.9800288,0.0029554528,0.000018573983,0.014668157],"study_design_scores_gemma":[0.00060079293,0.00059950433,0.00024212347,0.000040098083,0.000032026448,0.000030610077,0.00008960892,0.0010015452,0.9853299,0.010003063,0.0017086789,0.00032204966],"about_ca_topic_score_codex":0.00015766146,"about_ca_topic_score_gemma":0.000029953262,"teacher_disagreement_score":0.15008873,"about_ca_system_score_codex":0.000009800769,"about_ca_system_score_gemma":0.00009678278,"threshold_uncertainty_score":0.9999359},"labels":[],"label_agreement":null},{"id":"W2892221313","doi":"10.1007/978-1-4939-8706-1_13","title":"Small-Angle X-Ray Scattering for the Study of Proteins in the Ubiquitin Pathway","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Small-angle X-ray scattering; Scattering; Ubiquitin; Complement (music); Protocol (science); Computational biology; Crystallography; Physics; Biology; Biophysics; Chemistry; Optics; Medicine; Biochemistry; Gene; Pathology; Phenotype","score_opus":0.05255608023894904,"score_gpt":0.3726181919534098,"score_spread":0.32006211171446075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2892221313","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5288705,0.000062823,0.46980062,0.00011756043,0.00025852618,0.00073199294,0.0000026413757,0.000006062337,0.00014923543],"genre_scores_gemma":[0.72762454,8.863232e-7,0.27166274,0.00029488464,0.00009019473,0.0003081795,0.000001165626,0.000008029499,0.000009396022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977919,0.0014670477,0.00025203012,0.00023415138,0.000053406224,0.00020145255],"domain_scores_gemma":[0.99909484,0.00040045968,0.00008994628,0.00036364482,0.00004215285,0.000008944703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035350558,0.000090963986,0.00016973629,0.0000645421,0.000066913846,0.000012726642,0.0003819511,0.00007409096,0.000030602034],"category_scores_gemma":[0.00040135087,0.000048757112,0.00003527537,0.00019171656,0.00016739042,0.000014037303,0.00008349157,0.00009386661,0.0000017343222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039148013,0.000054670218,0.00067288737,0.000008323748,0.0000049570895,0.0000016086358,0.0017724205,0.00003063932,0.9881982,0.0014202266,0.0000036600272,0.0077932295],"study_design_scores_gemma":[0.0004582889,0.001022643,0.0029472853,0.0000086395075,0.000011507654,0.000003314629,0.0013275588,0.0001125693,0.98635423,0.006716155,0.0009590055,0.00007880416],"about_ca_topic_score_codex":0.00020035688,"about_ca_topic_score_gemma":0.000467424,"teacher_disagreement_score":0.198754,"about_ca_system_score_codex":0.000012069819,"about_ca_system_score_gemma":0.000017627946,"threshold_uncertainty_score":0.19882573},"labels":[],"label_agreement":null},{"id":"W2895580950","doi":"10.1007/978-1-4939-8814-3_26","title":"Two-Dimensional Biochemical Purification for Global Proteomic Analysis of Macromolecular Protein Complexes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Macromolecule; Chemistry; Computational biology; Biochemistry; Biology","score_opus":0.016058094193642014,"score_gpt":0.3636091218602476,"score_spread":0.34755102766660556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895580950","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38426837,0.00028296327,0.61454904,0.000058278096,0.000058679107,0.0005471604,0.0000669383,0.000005854752,0.00016273448],"genre_scores_gemma":[0.34490725,0.000002476484,0.65420496,0.00019024323,0.000065759574,0.00013311603,0.000465377,0.000013225803,0.000017557213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981321,0.00035317653,0.00058178423,0.00048975233,0.000079168065,0.0003640156],"domain_scores_gemma":[0.998933,0.000024323155,0.00024756018,0.0005251912,0.00020074053,0.00006914452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010098949,0.00021638045,0.00043281875,0.0001556385,0.00004913214,0.000010536787,0.00033279348,0.00032158033,0.00001577655],"category_scores_gemma":[0.00019948941,0.00020899645,0.00027628802,0.00054508727,0.00040036745,0.0000023091507,0.00017242394,0.00008770085,0.0000015271603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018035146,0.00006604356,0.00049030996,0.000018711753,0.00042368888,6.139268e-7,0.000013142987,0.00029365614,0.9868168,0.008266469,0.000042875006,0.0033873268],"study_design_scores_gemma":[0.0007858468,0.00043325982,0.0003725215,0.000011375694,0.00017263096,0.000005534105,0.0000084773565,0.009333789,0.9730769,0.014999311,0.0005554841,0.00024488402],"about_ca_topic_score_codex":0.00002948616,"about_ca_topic_score_gemma":0.000018973858,"teacher_disagreement_score":0.039655946,"about_ca_system_score_codex":0.00003184312,"about_ca_system_score_gemma":0.00008270278,"threshold_uncertainty_score":0.8522628},"labels":[],"label_agreement":null},{"id":"W2895804975","doi":"10.1007/978-1-4939-8805-1_5","title":"Detecting Stem Cell Marker Expression Using the NanoString nCounter System","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; McMaster University; Population Health Research Institute; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Embryonic stem cell; Induced pluripotent stem cell; Stem cell; Progenitor cell; Neural stem cell; Cell biology; Biology; Transcription factor; Cell; Neuroscience; Genetics; Gene","score_opus":0.028341854963334228,"score_gpt":0.3748701375692835,"score_spread":0.34652828260594926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895804975","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44778308,0.00079855195,0.5494416,0.000017854003,0.00033959124,0.0002529477,0.0000032602736,0.0000142328445,0.001348908],"genre_scores_gemma":[0.7670141,0.000020477502,0.23230034,0.00012961598,0.00021985383,0.0000365379,0.0000074065965,0.000047185964,0.00022448966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995668,0.0025376999,0.00038993766,0.0006557904,0.00014161361,0.0006069422],"domain_scores_gemma":[0.9988064,0.0001048937,0.0001476683,0.0007464485,0.00012223057,0.000072314324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024997813,0.00024227229,0.00024994093,0.00013148664,0.00019774376,0.000034414166,0.00056637696,0.00036315774,0.000013286897],"category_scores_gemma":[0.0001157068,0.00017955064,0.00012383662,0.00025682678,0.0002481686,0.000003931809,0.00066498196,0.00027918076,0.000010255588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007627635,0.00001645966,0.0017226206,0.000041182117,0.000019935498,0.000015260412,0.00004809106,0.000052794156,0.9937371,0.000021521077,0.00001815999,0.0042305836],"study_design_scores_gemma":[0.0003673547,0.00016164093,0.00007168805,0.000057818226,0.00001097905,0.00005659399,0.00033383424,0.0025055886,0.99202585,0.000029003917,0.0041724164,0.0002072109],"about_ca_topic_score_codex":0.000039959163,"about_ca_topic_score_gemma":0.000009651955,"teacher_disagreement_score":0.31923103,"about_ca_system_score_codex":0.00007605431,"about_ca_system_score_gemma":0.00006937435,"threshold_uncertainty_score":0.73218626},"labels":[],"label_agreement":null},{"id":"W2895954009","doi":"10.1007/978-1-4939-8805-1_2","title":"Isolation and Culture of Glioblastoma Brain Tumor Stem Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotchkiss Brain Institute; University of Calgary","funders":"China Scholarship Council; Stem Cell Network","keywords":"Glioblastoma; Cancer stem cell; Stem cell; Neural stem cell; Brain tumor; Cancer research; Population; Isolation (microbiology); In vitro; Brain cancer; Biology; Medicine; Immunology; Cancer; Bioinformatics; Pathology; Internal medicine; Cell biology; Genetics","score_opus":0.018045256714273167,"score_gpt":0.3792586292907709,"score_spread":0.36121337257649777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895954009","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23138118,0.0012908694,0.76576513,0.0002803353,0.00019721486,0.000215994,0.000007656843,0.000011793624,0.00084979687],"genre_scores_gemma":[0.0871382,0.000045847628,0.9114807,0.00095750246,0.00007125645,0.000008866626,0.0000026087016,0.000013279018,0.00028173623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990045,0.0003773429,0.00020983907,0.00022053062,0.000043001328,0.00014478785],"domain_scores_gemma":[0.99956274,0.0000676441,0.00007919097,0.0001778858,0.00006358576,0.00004893128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060386484,0.000092843824,0.00029250394,0.00011026111,0.000013998526,0.0000024530232,0.000043701162,0.00009614911,0.000046184636],"category_scores_gemma":[0.00007193934,0.000074562675,0.0000494782,0.00019825717,0.00017750805,0.000010273929,0.00004400488,0.000099460776,0.0000021624626],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013687758,0.000024086497,0.00073456235,0.000042059717,0.000021956424,0.000010721429,0.00034388484,5.3586194e-7,0.9519707,0.00031206035,0.00014389236,0.04625867],"study_design_scores_gemma":[0.0007235272,0.0010082367,0.00020849274,0.0000307447,0.000034744608,0.000036945912,0.00010093015,0.00013497002,0.9788762,0.000870793,0.017903602,0.00007083789],"about_ca_topic_score_codex":0.00003341901,"about_ca_topic_score_gemma":0.000015362437,"teacher_disagreement_score":0.14571555,"about_ca_system_score_codex":0.000018824012,"about_ca_system_score_gemma":0.000029161161,"threshold_uncertainty_score":0.30405775},"labels":[],"label_agreement":null},{"id":"W2895980603","doi":"10.1007/978-1-4939-8760-3_26","title":"Imaging SNAP-29 in Drosophila","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Snap; Exocytosis; Endocytosis; Cell biology; Endocytic cycle; Drosophila melanogaster; Intracellular; Biology; Live cell imaging; Cell; Membrane; Genetics","score_opus":0.01487225162539401,"score_gpt":0.34823666488673083,"score_spread":0.3333644132613368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2895980603","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3040639,0.00098282,0.69206536,0.00017014901,0.00025716212,0.00014067888,0.000003138318,0.000010368704,0.002306416],"genre_scores_gemma":[0.70292866,0.000103762686,0.29508623,0.00083370664,0.00023700547,0.00003481065,0.000640388,0.00003755329,0.00009789393],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819684,0.00051158195,0.0003246468,0.00053058664,0.000052686813,0.00038365723],"domain_scores_gemma":[0.9994354,0.00001709298,0.000057951296,0.00038881524,0.000047256402,0.00005344477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000985324,0.0001828586,0.00022328731,0.00017476335,0.000032311294,0.000009029867,0.0002344081,0.0002447014,0.000047645724],"category_scores_gemma":[0.00013323111,0.00018918069,0.00009403092,0.00023865857,0.00025177657,0.0000025382478,0.00008723441,0.0001706166,0.000009297502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055399232,0.000037723967,0.035643198,0.000005611835,0.000009046564,0.00002898706,0.00005002292,0.000007136779,0.9564661,0.0010731859,0.0000069343764,0.006616662],"study_design_scores_gemma":[0.0009443929,0.0002255609,0.0066318978,0.00001694856,0.0000095847145,0.00002764159,0.00003957842,0.00035205492,0.93602204,0.008816481,0.046562843,0.00035096667],"about_ca_topic_score_codex":0.00006400195,"about_ca_topic_score_gemma":0.00014546055,"teacher_disagreement_score":0.39886478,"about_ca_system_score_codex":0.00002065065,"about_ca_system_score_gemma":0.0000423643,"threshold_uncertainty_score":0.7714565},"labels":[],"label_agreement":null},{"id":"W2896008585","doi":"10.1007/978-1-4939-8728-3_13","title":"From RNA-seq to Biological Inference: Using Compositional Data Analysis in Meta-Transcriptomics","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Geochemistry and Geologic Mapping","field":"Computer Science","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences Centre; Lawson Health Research Institute; Western University","funders":"","keywords":"Transcriptome; Inference; Computational biology; Computer science; RNA-Seq; Exploratory analysis; Data mining; Bayesian probability; Exploratory data analysis; Biology; Artificial intelligence; Data science; Gene; Gene expression; Genetics","score_opus":0.1870081359447212,"score_gpt":0.45475850604500556,"score_spread":0.26775037010028435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896008585","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.063406646,0.00015228037,0.9346159,0.0011133122,0.00015408153,0.0000969275,0.00004107123,0.00002796666,0.000391807],"genre_scores_gemma":[0.18006788,0.000004069195,0.8188554,0.00090109097,0.000042189444,0.000010198378,0.00011197785,0.0000017369921,0.0000054560833],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9966739,0.0014955787,0.00042124232,0.0009611852,0.00008264515,0.00036546262],"domain_scores_gemma":[0.9981962,0.0004301355,0.00008449488,0.0011285706,0.000082970495,0.00007765325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002040178,0.00019084298,0.00058425963,0.0003102069,0.000050476658,0.000037927537,0.0018637559,0.0002491718,0.0001343212],"category_scores_gemma":[0.0007382489,0.00015831405,0.00012062583,0.001526021,0.00018523412,0.00007223873,0.0010957754,0.00023626283,0.000006017988],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014897477,0.00006067198,0.0061517637,0.000002122897,0.0005020854,0.000034363766,0.00019898466,0.0019555937,0.9792738,0.008652146,0.000008192996,0.0031453774],"study_design_scores_gemma":[0.00056194677,0.00019121899,0.0061573293,0.000015550084,0.0005004516,0.000013700042,0.000056284873,0.46445355,0.2558422,0.2668124,0.004660232,0.00073510886],"about_ca_topic_score_codex":0.00059089187,"about_ca_topic_score_gemma":0.000078424164,"teacher_disagreement_score":0.7234316,"about_ca_system_score_codex":0.000034793116,"about_ca_system_score_gemma":0.000054027925,"threshold_uncertainty_score":0.645586},"labels":[],"label_agreement":null},{"id":"W2896069353","doi":"10.1007/978-1-4939-8805-1_16","title":"In Vitro Assays for Screening Small Molecules","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"In vitro; In vivo; Cancer research; Small molecule; In vitro toxicology; Cancer stem cell; Population; Cancer; Metastasis; Biology; Chemistry; Medicine; Biochemistry; Genetics","score_opus":0.05993061704190337,"score_gpt":0.43901426114992176,"score_spread":0.37908364410801837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896069353","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012344272,0.0009850038,0.9832882,0.0008529624,0.00026615112,0.00043519025,0.000011192204,0.000016850783,0.001800145],"genre_scores_gemma":[0.0074002882,0.000031214513,0.9896292,0.0025135837,0.00014444471,0.000104872146,0.000023797582,0.000027685106,0.00012492697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984398,0.00044402445,0.00029816708,0.0003865477,0.000045771565,0.00038569878],"domain_scores_gemma":[0.9993286,0.00019141893,0.000061080354,0.00028035307,0.00006799719,0.000070539965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001490891,0.00014701688,0.0004273417,0.00026903418,0.000022559565,0.0000053648323,0.00010885783,0.00017312744,0.000047883277],"category_scores_gemma":[0.000605316,0.00013376922,0.0001265042,0.00028388586,0.00014414515,0.000011800619,0.00006699385,0.00017111683,0.000003417771],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037912052,0.000044308326,0.00031013513,0.000027143917,0.000028439948,0.000035659366,0.000059436363,0.0000035071307,0.86022925,0.0011337805,0.00003830381,0.13771091],"study_design_scores_gemma":[0.0018684422,0.00038081227,0.0001964363,0.000029314055,0.00004273483,0.000025814787,0.00004119804,0.0009118303,0.93987584,0.0046297098,0.051853742,0.00014413225],"about_ca_topic_score_codex":0.00018217336,"about_ca_topic_score_gemma":0.000056422625,"teacher_disagreement_score":0.13756678,"about_ca_system_score_codex":0.00004921798,"about_ca_system_score_gemma":0.000056102563,"threshold_uncertainty_score":0.54549503},"labels":[],"label_agreement":null},{"id":"W2896080601","doi":"10.1007/978-1-4939-8805-1_14","title":"EPH Profiling of BTIC Populations in Glioblastoma Multiforme Using CyTOF","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; Amgen (Canada); Population Health Research Institute; McMaster University; University of Toronto","funders":"","keywords":"Glioblastoma; Mass cytometry; Computational biology; Flow cytometry; Biology; Cancer research; Phenotype; Immunology; Genetics; Gene","score_opus":0.06438363785217147,"score_gpt":0.4152901762897059,"score_spread":0.3509065384375344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896080601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55321217,0.00018027822,0.44617715,0.0000112959015,0.0001709226,0.00013496919,0.0000059844633,0.000004489861,0.00010276625],"genre_scores_gemma":[0.51777613,0.000007818818,0.4820581,0.00006339777,0.000047885704,0.000007896346,0.0000157617,0.000016292071,0.0000067020055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99822915,0.0005275108,0.0004720799,0.0003889138,0.000054127417,0.0003282012],"domain_scores_gemma":[0.9994011,0.000028380613,0.00011445336,0.00032769266,0.00008577625,0.000042588497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006835153,0.00017156223,0.00029137614,0.00022019078,0.000035984827,0.0000054099105,0.00020773963,0.00031407236,0.0000102524555],"category_scores_gemma":[0.0003467222,0.00017324177,0.000095694224,0.00031081305,0.00024719365,0.0000032380894,0.00009080902,0.00013748162,0.0000012362344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000111241025,0.000080332364,0.036131993,0.000018392704,0.000014749138,0.000003853563,0.000058544043,0.00031392666,0.9596727,0.0006060835,7.283472e-7,0.002987489],"study_design_scores_gemma":[0.00066535856,0.00041999808,0.0013365519,0.000026911488,0.000012057268,0.0000118737735,0.00003953496,0.005875366,0.98959357,0.0016549991,0.00017549189,0.0001883173],"about_ca_topic_score_codex":0.00019113667,"about_ca_topic_score_gemma":0.00030896376,"teacher_disagreement_score":0.035880957,"about_ca_system_score_codex":0.000029148552,"about_ca_system_score_gemma":0.00006886701,"threshold_uncertainty_score":0.7064594},"labels":[],"label_agreement":null},{"id":"W2896101588","doi":"10.1007/978-1-4939-8805-1_19","title":"In Vivo Murine Models of Brain Metastasis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Brain Metastases and Treatment","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Population Health Research Institute","funders":"","keywords":"Brain metastasis; In vivo; Metastasis; Medicine; Central nervous system; Primary tumor; Disease; Cancer; Lung; Lung cancer; Pathology; Neuroscience; Cancer research; Biology; Internal medicine","score_opus":0.04580750224174841,"score_gpt":0.43866308061057663,"score_spread":0.39285557836882823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896101588","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11258719,0.00092529115,0.88103515,0.0020145613,0.00014771368,0.00037801324,0.000022331229,0.000012730024,0.002877039],"genre_scores_gemma":[0.0955569,0.000034721896,0.90267605,0.0014913048,0.00003625018,0.000035294266,0.000008640766,0.000018256895,0.0001426121],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776995,0.0011450696,0.0003992746,0.00033275632,0.000072996736,0.00027993633],"domain_scores_gemma":[0.99914145,0.00025710178,0.0000809373,0.00040461344,0.000055283846,0.000060587416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017879553,0.00015432062,0.0005652105,0.0003269398,0.000010871713,0.000001778907,0.000097987206,0.00012486802,0.00032214966],"category_scores_gemma":[0.00041048642,0.00012369838,0.00011912126,0.00040810456,0.00023197598,0.000021923164,0.00008316399,0.00013145989,0.000003825314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026627752,0.0005366087,0.0019828507,0.00006447083,0.0002288713,0.0002954282,0.00024757846,0.00005841198,0.92059845,0.03690269,0.00020652375,0.038611818],"study_design_scores_gemma":[0.0030984534,0.0014281692,0.00037179526,0.000051575924,0.00009943968,0.00008019128,0.00006470792,0.0016655701,0.9269362,0.057891298,0.008148284,0.00016428952],"about_ca_topic_score_codex":0.00026744485,"about_ca_topic_score_gemma":0.000041969273,"teacher_disagreement_score":0.03844753,"about_ca_system_score_codex":0.00004317688,"about_ca_system_score_gemma":0.000045377823,"threshold_uncertainty_score":0.5044274},"labels":[],"label_agreement":null},{"id":"W2896134031","doi":"10.1007/978-1-4939-8823-5_6","title":"Quantitation of Tapentadol by Liquid Chromatography: Tandem Mass Spectrometry","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pharmacological Effects and Assays","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Office of the Chief Medical Examiner","funders":"","keywords":"Tapentadol; Chemistry; Chromatography; Tramadol; Mass spectrometry; Tandem mass spectrometry; Liquid chromatography–mass spectrometry; Analgesic; Agonist; Extraction (chemistry); Pharmacology; Opioid; Receptor; Medicine; Biochemistry","score_opus":0.025109543155518277,"score_gpt":0.37658044080015957,"score_spread":0.3514708976446413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896134031","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8578685,0.0004758234,0.13975582,0.0002810658,0.00016413005,0.00018707853,0.000016045207,0.000029530878,0.001222031],"genre_scores_gemma":[0.8239374,0.000053137137,0.17541589,0.00046624758,0.00006905241,0.000015935882,0.000030944506,0.0000011611278,0.000010199915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99804974,0.0010353992,0.0002623296,0.0003002291,0.00007416822,0.00027812374],"domain_scores_gemma":[0.9993467,0.0003826456,0.00011793944,0.000053390686,0.000043529704,0.000055792905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009930405,0.00012792338,0.0002750512,0.000038421207,0.000048094433,0.000008025288,0.00024831685,0.00016419655,0.0004947435],"category_scores_gemma":[0.0001829858,0.000052322026,0.00010444237,0.0006461454,0.0002462331,0.000027432994,0.000060037233,0.00012363495,0.0000077523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040229843,0.00007040236,0.0029677365,0.0000032765738,0.000015444519,0.0000030727995,0.000007164691,3.347511e-7,0.9846928,0.0015934161,0.00007385958,0.010532258],"study_design_scores_gemma":[0.00018857075,0.0020739278,0.0046928725,0.000008361393,0.000009826492,0.0000020639752,0.000028879092,0.00008658054,0.9831633,0.006546302,0.003059469,0.00013984977],"about_ca_topic_score_codex":0.00006980251,"about_ca_topic_score_gemma":0.000012877668,"teacher_disagreement_score":0.03566007,"about_ca_system_score_codex":0.000013807739,"about_ca_system_score_gemma":0.000004066036,"threshold_uncertainty_score":0.5417095},"labels":[],"label_agreement":null},{"id":"W2896255045","doi":"10.1007/978-1-4939-8805-1_7","title":"In Vitro Self-Renewal Assays for Brain Tumor Stem Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"Stem cell; Biology; Cancer stem cell; Cell biology; Population; Cell division; Cancer research; Cell; Immunology; Genetics; Medicine","score_opus":0.02835099183723636,"score_gpt":0.4054423753756526,"score_spread":0.3770913835384162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896255045","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06375682,0.000794112,0.93035865,0.0014859239,0.000988424,0.0008976641,0.000032311844,0.00004116084,0.0016449159],"genre_scores_gemma":[0.012474502,0.000020241263,0.9820727,0.0046834857,0.00022516899,0.00013299187,0.000011644795,0.000034570367,0.00034470996],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979129,0.00076627574,0.00036211606,0.00045125655,0.0000650819,0.00044238294],"domain_scores_gemma":[0.9990677,0.00035363922,0.00008232229,0.00033900145,0.00006580663,0.000091530324],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021189528,0.00017577584,0.00052702456,0.00024752217,0.000022815444,0.0000059087124,0.00012927517,0.00015993038,0.00006484821],"category_scores_gemma":[0.00017269548,0.00015633604,0.00013975782,0.00030719957,0.00011300824,0.000014816393,0.000068342015,0.00017521581,0.000009774203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034123598,0.00010345351,0.00015691211,0.000054997305,0.000041306233,0.000059142996,0.00013071334,0.000001022907,0.9665024,0.00055205374,0.0003486086,0.03170813],"study_design_scores_gemma":[0.001973431,0.00049163384,0.00001835165,0.000016311964,0.000043253593,0.00002795131,0.000041844854,0.00017456683,0.8987423,0.002266332,0.09606299,0.00014104162],"about_ca_topic_score_codex":0.0001295102,"about_ca_topic_score_gemma":0.00004271678,"teacher_disagreement_score":0.09571438,"about_ca_system_score_codex":0.00012000289,"about_ca_system_score_gemma":0.0001252071,"threshold_uncertainty_score":0.6375199},"labels":[],"label_agreement":null},{"id":"W2896313588","doi":"10.1007/978-1-4939-8805-1_1","title":"Introduction to Brain Tumor Stem Cells","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"Cancer stem cell; Stem cell; Neural stem cell; Biology; Cancer; Cancer research; Brain tumor; Cancer cell; Tumor initiation; Population; Neuroscience; Pathology; Medicine; Cell biology; Metastasis; Genetics","score_opus":0.060750509078815046,"score_gpt":0.46198226174748647,"score_spread":0.4012317526686714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896313588","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000019677257,0.7064038,0.29039454,0.0004695313,0.0014857333,0.00093318935,0.000020065907,0.00002477535,0.0002663918],"genre_scores_gemma":[8.458291e-9,0.5389351,0.45795754,0.0008313182,0.0010630575,0.00013699646,0.000034818477,0.000051243915,0.0009898718],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99557483,0.002203064,0.00072777574,0.00095698907,0.00009439742,0.0004429403],"domain_scores_gemma":[0.99844515,0.00021850217,0.00022679204,0.0008622689,0.000073169875,0.00017412085],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024446412,0.00041294243,0.0022743815,0.0005720884,0.000022759486,0.000010346925,0.00022130036,0.00037629367,0.0002738168],"category_scores_gemma":[0.00030796434,0.00032715657,0.0004998098,0.0007631151,0.00010968493,0.000008634055,0.00016927534,0.00048264282,0.00018997655],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022238857,0.000040691655,4.3730245e-7,0.0034025272,0.00012389958,0.00006576125,0.00001835436,2.8168552e-7,0.012954037,0.000158041,0.0067124492,0.9765013],"study_design_scores_gemma":[0.00021970361,0.00039759182,1.1136488e-7,0.001223444,0.0005009565,0.00017197133,0.0000073388615,6.866052e-7,0.01362538,0.00007518223,0.98350644,0.0002712106],"about_ca_topic_score_codex":0.00003107006,"about_ca_topic_score_gemma":0.0000058432715,"teacher_disagreement_score":0.97679394,"about_ca_system_score_codex":0.000254729,"about_ca_system_score_gemma":0.0002693982,"threshold_uncertainty_score":0.99991804},"labels":[],"label_agreement":null},{"id":"W2896425032","doi":"10.1007/978-1-4939-8760-3_24","title":"Visualization of SNARE-Mediated Organelle Membrane Hemifusion by Electron Microscopy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Lipid bilayer fusion; Organelle; Vacuole; Cell biology; Electron tomography; Vesicle fusion; Vesicle; Biophysics; Organelle biogenesis; Electron microscope; Membrane; Chemistry; Biology; Biogenesis; Materials science; Transmission electron microscopy; Biochemistry; Nanotechnology; Scanning transmission electron microscopy; Cytoplasm; Synaptic vesicle","score_opus":0.008153448819884572,"score_gpt":0.376222350307687,"score_spread":0.36806890148780247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896425032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7595848,0.0004360685,0.2390303,0.00004276882,0.00027856027,0.00022495446,0.000023509594,0.000014722218,0.00036431622],"genre_scores_gemma":[0.82099783,0.00030905486,0.17598404,0.000738708,0.00022888609,0.000032833417,0.0013539364,0.00007192124,0.00028279325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808186,0.0005918036,0.0003929078,0.0004976617,0.00007873596,0.00035704733],"domain_scores_gemma":[0.9992153,0.000032518445,0.00015611594,0.00039568875,0.00013951646,0.000060862792],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005256284,0.00021900825,0.0003136206,0.00011469882,0.00004316327,0.000005947973,0.00026142798,0.00044052702,0.00010191505],"category_scores_gemma":[0.0003017792,0.0002019277,0.00008090231,0.00033074903,0.00026095318,0.0000028298937,0.00012975564,0.000112531736,0.000004775417],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012136821,0.00007022827,0.001730436,0.000020186124,0.000022489992,0.0000013918861,0.000039565748,0.0000011552625,0.99662596,0.0001005928,0.0002178726,0.0010487348],"study_design_scores_gemma":[0.00066747336,0.00071492686,0.00011280105,0.0000101148225,0.000022561326,0.000011724233,0.000014394949,0.000018685461,0.98483527,0.00010038585,0.01328173,0.00020995157],"about_ca_topic_score_codex":0.000042546893,"about_ca_topic_score_gemma":0.000015291922,"teacher_disagreement_score":0.06304627,"about_ca_system_score_codex":0.000016993936,"about_ca_system_score_gemma":0.000068144866,"threshold_uncertainty_score":0.8234373},"labels":[],"label_agreement":null},{"id":"W2896520419","doi":"10.1007/978-1-4939-8805-1_8","title":"Differentiation of Brain Tumor Initiating Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"Neural stem cell; Stem cell; Biology; Neurosphere; Multipotent Stem Cell; Cell biology; Cellular differentiation; Lineage (genetic); Neuroepithelial cell; Adult stem cell; Gene; Progenitor cell; Genetics","score_opus":0.03377464517220272,"score_gpt":0.4198638135364131,"score_spread":0.38608916836421037,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896520419","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23359305,0.00023006779,0.7635941,0.00019444968,0.00025421017,0.00014786099,0.000004924349,0.000010139371,0.0019712064],"genre_scores_gemma":[0.22591564,0.000011597034,0.77291036,0.0010114791,0.00007508358,0.000010195555,0.000010250772,0.000012029077,0.00004337985],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998812,0.00049590465,0.00027673994,0.00019566354,0.000050822993,0.00016887237],"domain_scores_gemma":[0.99943095,0.0001518465,0.000111196234,0.00020084578,0.00006700606,0.000038147176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007584378,0.00008531986,0.0002989477,0.0001446909,0.00001385493,0.000002060649,0.000057508158,0.00006920533,0.00017496657],"category_scores_gemma":[0.00042227004,0.0000740484,0.0000739188,0.00020914726,0.00012298462,0.0000087191365,0.000046682868,0.000101709324,0.000004025575],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042164153,0.000042943582,0.002255917,0.000037493573,0.000024163177,0.00000767541,0.00011375321,6.884961e-7,0.9543954,0.00072893564,0.000029652334,0.04232117],"study_design_scores_gemma":[0.0006636965,0.0003431321,0.0016290062,0.000032496264,0.000034548433,0.000008820164,0.00003777568,0.00015656637,0.99275535,0.0015893572,0.0026829154,0.00006630967],"about_ca_topic_score_codex":0.00006798001,"about_ca_topic_score_gemma":0.000011819994,"teacher_disagreement_score":0.04225486,"about_ca_system_score_codex":0.0000255124,"about_ca_system_score_gemma":0.00004199945,"threshold_uncertainty_score":0.30196062},"labels":[],"label_agreement":null},{"id":"W2896595890","doi":"10.1007/978-1-4939-8864-8_12","title":"X-Ray Absorption Spectroscopy of Metalloproteins","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"X-ray Spectroscopy and Fluorescence Analysis","field":"Physics and Astronomy","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Saskatchewan; Canadian Light Source","keywords":"X-ray absorption spectroscopy; Metalloprotein; Absorption spectroscopy; Spectroscopy; Absorption (acoustics); Nanotechnology; Chemistry; Materials science; Metal; Physics; Optics","score_opus":0.013025994337088327,"score_gpt":0.3749375323616669,"score_spread":0.36191153802457854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896595890","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13248588,0.000082972314,0.8622282,0.00005950303,0.0001021319,0.000119803095,0.0000054157354,0.000010498895,0.004905609],"genre_scores_gemma":[0.39577183,0.000003216841,0.60400003,0.000038287606,0.00010164656,0.000017112421,0.000011686204,0.000008994146,0.000047216097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985176,0.0004935385,0.0003209428,0.00031844364,0.00006446607,0.00028502356],"domain_scores_gemma":[0.99936295,0.000048511458,0.00013520502,0.00035347778,0.00006168691,0.000038164108],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007367321,0.0001457392,0.00035938833,0.00018267705,0.000036765767,0.000007983273,0.00022832103,0.00007867843,0.0008601926],"category_scores_gemma":[0.00003347872,0.00013050907,0.00016050407,0.00043012484,0.00027039918,0.00003483928,0.000059698094,0.00015473676,0.000027901342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017967399,0.000071081326,0.010541272,0.0000030146775,0.00008176097,8.7833916e-7,0.000071414535,0.000011258476,0.9404031,0.043967467,0.000005344076,0.0048254216],"study_design_scores_gemma":[0.00021216547,0.00019888587,0.0012229643,0.000008036866,0.00004231655,1.9350048e-7,0.00005781775,0.00048428218,0.93415934,0.063020155,0.0004689986,0.00012485981],"about_ca_topic_score_codex":0.00030996473,"about_ca_topic_score_gemma":0.000010176553,"teacher_disagreement_score":0.26328593,"about_ca_system_score_codex":0.000016910197,"about_ca_system_score_gemma":0.000031511314,"threshold_uncertainty_score":0.94185054},"labels":[],"label_agreement":null},{"id":"W2896641064","doi":"10.1007/978-1-4939-8820-4_13","title":"Induction of Cu/Zn Superoxide Dismutase (SOD1) Aggregation in Living Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Vancouver Coastal Health","funders":"Canadian Institutes of Health Research; ALS Society of Canada","keywords":"SOD1; Amyotrophic lateral sclerosis; Superoxide dismutase; Protein aggregation; Chemistry; Dismutase; Cell biology; Biophysics; Nucleation; Biochemistry; Biology; Disease; Medicine; Pathology; Enzyme","score_opus":0.042901575072985115,"score_gpt":0.42771918588415936,"score_spread":0.38481761081117427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896641064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8269002,0.00017861018,0.17200246,0.00027007816,0.00014915442,0.00026904454,0.0000018874911,0.000011957166,0.00021665326],"genre_scores_gemma":[0.64538354,0.00007041028,0.35426587,0.00012727047,0.000065183594,0.000020944646,0.000007876521,0.000014986359,0.000043949505],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973628,0.0014777187,0.00039819974,0.00032564148,0.000121037854,0.00031463112],"domain_scores_gemma":[0.9992257,0.00022365326,0.00007610015,0.00031107015,0.00009833415,0.00006515545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017999333,0.000118345655,0.00033732087,0.0003599208,0.000019120367,0.0000041250337,0.000119215474,0.000250071,0.00015950856],"category_scores_gemma":[0.0012607404,0.000101147445,0.000057804868,0.00053666567,0.00030848285,0.000038884547,0.00011948659,0.0003085258,0.000012302064],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006748306,0.00008784794,0.020055672,0.000026573201,0.000013191959,0.00001757101,0.00028949446,0.0000060946727,0.937826,0.00024878146,0.000007673991,0.041353658],"study_design_scores_gemma":[0.00065730925,0.0005895732,0.06606369,0.00019348686,0.000012407806,0.000014328876,0.000069128175,0.00081565627,0.9293209,0.0019168102,0.00023588286,0.00011088943],"about_ca_topic_score_codex":0.0006020845,"about_ca_topic_score_gemma":0.000058396177,"teacher_disagreement_score":0.1822634,"about_ca_system_score_codex":0.00012654351,"about_ca_system_score_gemma":0.000061825005,"threshold_uncertainty_score":0.41246733},"labels":[],"label_agreement":null},{"id":"W2896701276","doi":"10.1007/978-1-4939-8772-6_11","title":"LiveFly: A Toolbox for the Analysis of Transcription Dynamics in Live Drosophila Embryos","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Agence Nationale de la Recherche","keywords":"Toolbox; Drosophila (subgenus); Dynamics (music); Embryo; Biology; Cell biology; Computational biology; Genetics; Computer science; Sociology; Gene","score_opus":0.017636783070100144,"score_gpt":0.35410299957860225,"score_spread":0.3364662165085021,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896701276","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32511353,0.0013442903,0.6728963,0.0001373366,0.00010557628,0.00028107633,0.000024564753,0.000003970687,0.0000933297],"genre_scores_gemma":[0.8029955,0.00014426802,0.19616982,0.00022615094,0.00008818876,0.000105615174,0.00018225575,0.000023322287,0.00006489535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977401,0.00086143933,0.00048929366,0.0005130331,0.00006866041,0.00032748646],"domain_scores_gemma":[0.9988898,0.00014057456,0.0001670717,0.00062181463,0.00014414988,0.000036608173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016259588,0.00019441031,0.0004808293,0.0003880475,0.000046875888,0.000007461242,0.00037837724,0.00033419198,0.000019710473],"category_scores_gemma":[0.00027727432,0.00016159311,0.0004311938,0.0010497159,0.0003453688,0.000002094844,0.00006926177,0.000108899556,8.35303e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015002732,0.00006885223,0.0102103455,0.000011960328,0.0010271147,0.0000013662519,0.00013720054,0.0032131055,0.9728951,0.0014690651,0.000011673225,0.010804181],"study_design_scores_gemma":[0.0018808463,0.0012953978,0.03271198,0.00002796415,0.0028249524,0.0000076199567,0.0008122294,0.34179384,0.60792464,0.006538453,0.0034085112,0.0007735821],"about_ca_topic_score_codex":0.00012080833,"about_ca_topic_score_gemma":0.002106253,"teacher_disagreement_score":0.47788197,"about_ca_system_score_codex":0.000055852768,"about_ca_system_score_gemma":0.000051880375,"threshold_uncertainty_score":0.6589576},"labels":[],"label_agreement":null},{"id":"W2896735041","doi":"10.1007/978-1-4939-8736-8_1","title":"Predicting the Effect of Mutations on Protein Folding and Protein-Protein Interactions","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; Artificial Intelligence in Medicine (Canada); University of Toronto","funders":"","keywords":"Protein folding; Folding (DSP implementation); Computational biology; Chemistry; Biology; Biochemistry; Engineering","score_opus":0.009120102322853724,"score_gpt":0.3663427101280604,"score_spread":0.3572226078052067,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896735041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7001799,0.00018140534,0.29796973,0.00011074391,0.00007373273,0.0008856564,0.000008420847,0.00000954145,0.0005808859],"genre_scores_gemma":[0.84206533,0.000002317931,0.15730397,0.000066802946,0.000101585116,0.00032877392,0.000020684522,0.000021273514,0.00008924422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99770916,0.0012811493,0.00029514026,0.00039811325,0.00006558953,0.00025087214],"domain_scores_gemma":[0.9992343,0.00009205939,0.00015949298,0.0004126073,0.000061505285,0.000039999388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010210548,0.00019469473,0.00022735611,0.000104889026,0.00012043018,0.000013313935,0.00021514884,0.00019360945,0.000007555499],"category_scores_gemma":[0.0012101786,0.0001385683,0.00008011312,0.00018479377,0.00039056796,0.000003691557,0.00017752795,0.00023669921,0.0000010750533],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014065915,0.000011376571,0.0011324529,0.000026553764,0.000044781555,0.0000018468427,0.000048062368,0.000016342276,0.9821402,0.0023495222,0.0000015620915,0.01408665],"study_design_scores_gemma":[0.00044160956,0.0019956983,0.0002152183,0.0000694525,0.00001744914,0.000014419532,0.00002422943,0.00039172298,0.99039114,0.0056004105,0.00070342654,0.0001352521],"about_ca_topic_score_codex":0.000051859275,"about_ca_topic_score_gemma":0.000033487828,"teacher_disagreement_score":0.14188546,"about_ca_system_score_codex":0.000015235219,"about_ca_system_score_gemma":0.000031144238,"threshold_uncertainty_score":0.5650651},"labels":[],"label_agreement":null},{"id":"W2896754820","doi":"10.1007/978-1-4939-8728-3_18","title":"Analyzing Metabolic Pathways in Microbiomes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"","keywords":"Microbiome; Metabolic pathway; Biology; Computational biology; Function (biology); Differential (mechanical device); Enzyme; Bioinformatics; Evolutionary biology; Biochemistry","score_opus":0.013832193073343674,"score_gpt":0.33333149114743515,"score_spread":0.3194992980740915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896754820","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54164034,0.003915085,0.4533959,0.000073677154,0.0005358339,0.00014116662,0.0000061424616,0.000017099575,0.00027477523],"genre_scores_gemma":[0.41247767,0.0003483549,0.5863156,0.0002173582,0.00041869353,0.000027243108,0.000057714456,0.00003277867,0.00010462397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981284,0.0005457768,0.0003323789,0.00056604436,0.000029659228,0.00039771793],"domain_scores_gemma":[0.99941,0.000008006639,0.00006460738,0.00041816637,0.000054367876,0.00004487938],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011837367,0.00020081544,0.00029973785,0.00031929248,0.000029261917,0.000010553152,0.0002327193,0.0002765713,0.00001802091],"category_scores_gemma":[0.00034363344,0.00019304892,0.00008857189,0.0005154409,0.00016570093,0.000002570771,0.00013030236,0.00015439535,0.0000089937585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024366842,0.000037410828,0.0019847467,0.0000067011333,0.000023430695,0.0000034823056,0.00003933916,0.000027558177,0.97691476,0.00077582424,0.00002844011,0.020133924],"study_design_scores_gemma":[0.00036731965,0.000113997725,0.0014669498,0.000009932966,0.0000090283,0.000021996371,0.000015280097,0.000038908795,0.9551371,0.00050383963,0.042095672,0.00021999763],"about_ca_topic_score_codex":0.000065991946,"about_ca_topic_score_gemma":0.000052975767,"teacher_disagreement_score":0.13291965,"about_ca_system_score_codex":0.000014246613,"about_ca_system_score_gemma":0.000036204125,"threshold_uncertainty_score":0.7872307},"labels":[],"label_agreement":null},{"id":"W2896843491","doi":"10.1007/978-1-4939-8728-3_17","title":"Bayesian Inference of Microbial Community Structure from Metagenomic Data Using BioMiCo","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Interpretability; Metagenomics; Computer science; Community structure; Inference; Data mining; Sample (material); Bayesian probability; Bayesian inference; Set (abstract data type); Prior probability; Machine learning; Artificial intelligence; Ecology; Biology","score_opus":0.07280853400990732,"score_gpt":0.44918616993463883,"score_spread":0.3763776359247315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896843491","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5488704,0.00039282118,0.44996297,0.00001981721,0.00019059281,0.000112730784,0.00041725184,0.000004103394,0.000029303565],"genre_scores_gemma":[0.5022449,0.000021362926,0.4966278,0.00026785914,0.00008327558,9.030317e-7,0.00073266524,0.000017442551,0.0000038102617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99617654,0.002452802,0.00045956398,0.00052153674,0.000036614925,0.00035296674],"domain_scores_gemma":[0.997942,0.00008013743,0.00021428149,0.0016127819,0.00008470337,0.00006611474],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010389213,0.00022620284,0.000416721,0.0001264421,0.000099778146,0.000011126062,0.001087166,0.00044549044,0.000069602196],"category_scores_gemma":[0.0003829461,0.00022174699,0.00006624046,0.00018299604,0.00051636045,0.0000042347774,0.0010707105,0.00032629323,0.0000018013739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007012087,0.000048917238,0.003352567,0.000016398959,0.000075790005,0.000001197448,0.00010199215,0.0000089673695,0.9936761,0.00007844841,0.000029347968,0.0025401],"study_design_scores_gemma":[0.00056136795,0.00023437706,0.002056232,0.000017403994,0.000040473344,0.000009940289,0.000053004846,0.00040553935,0.99178135,0.0020729974,0.002535563,0.00023176627],"about_ca_topic_score_codex":0.0026377272,"about_ca_topic_score_gemma":0.0010650039,"teacher_disagreement_score":0.046664834,"about_ca_system_score_codex":0.000026511,"about_ca_system_score_gemma":0.00020813703,"threshold_uncertainty_score":0.904258},"labels":[],"label_agreement":null},{"id":"W2896885793","doi":"10.1007/978-1-4939-8805-1_12","title":"Embryonic Stem Cell Models of Human Brain Tumors","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Manitoba","funders":"","keywords":"Medulloblastoma; Embryonic stem cell; Neural stem cell; Nod; Cancer research; Pathology; Human brain; Biology; Brain tumor; Stem cell; Medicine; Neuroscience; Cell biology; Gene; Genetics","score_opus":0.035122279698952374,"score_gpt":0.39408780739456056,"score_spread":0.3589655276956082,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896885793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5077983,0.0009177657,0.48488492,0.00011521261,0.00009624464,0.00026314709,0.000011215013,0.00001057886,0.00590261],"genre_scores_gemma":[0.79482085,0.000050867817,0.20274955,0.00034645005,0.00010310319,0.00004640766,0.00006359531,0.00005774967,0.0017614183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965243,0.0017101916,0.00043511,0.00065466756,0.00012701188,0.0005487704],"domain_scores_gemma":[0.9987747,0.0000655076,0.00015227399,0.00076721696,0.00014314754,0.00009715524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018004589,0.00022969852,0.00037989218,0.00022057086,0.000056543468,0.000008223462,0.0006164481,0.00036096651,0.000030879863],"category_scores_gemma":[0.00008645055,0.00022535761,0.00015167701,0.0002832053,0.00049875403,0.000003170504,0.0004651111,0.00020674353,0.000010285293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048213107,0.00007801334,0.0004794555,0.000037762395,0.000028445813,0.000010640433,0.00004761706,0.00007801388,0.9949384,0.0014710029,0.00016425068,0.002618213],"study_design_scores_gemma":[0.0006040256,0.00096194504,0.00011782481,0.000015551277,0.0000070368424,0.000010761227,0.000048306436,0.0006099567,0.9911673,0.0040300367,0.0022013765,0.00022589769],"about_ca_topic_score_codex":0.00004864366,"about_ca_topic_score_gemma":0.000025140962,"teacher_disagreement_score":0.28702256,"about_ca_system_score_codex":0.000027176873,"about_ca_system_score_gemma":0.00010804931,"threshold_uncertainty_score":0.9189817},"labels":[],"label_agreement":null},{"id":"W2896919328","doi":"10.1007/978-1-4939-8728-3_4","title":"Culture and Molecular Profiling of the Respiratory Tract Microbiota","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Microbiome; Profiling (computer programming); Biology; Computational biology; Metagenomics; Respiratory tract; 16S ribosomal RNA; Microbiology; Gene; Bioinformatics; Genetics; Respiratory system; Computer science","score_opus":0.019392535053091808,"score_gpt":0.389704373323599,"score_spread":0.3703118382705072,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896919328","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87323004,0.004338411,0.120878585,0.00017658704,0.00026116482,0.000402887,0.00002015106,0.000007797734,0.000684355],"genre_scores_gemma":[0.45635384,0.00011903257,0.5403109,0.0029304482,0.00011815644,0.000021007456,0.00002399594,0.00004128855,0.00008130142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977891,0.0010031941,0.00034961605,0.00048057042,0.000045055902,0.00033247867],"domain_scores_gemma":[0.99913126,0.000018584788,0.00015186146,0.0005447177,0.000098563614,0.000054981716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089584297,0.00019633939,0.00026232467,0.00007176698,0.00006899139,0.000007745435,0.00032642894,0.00040940786,0.000007277829],"category_scores_gemma":[0.00027147948,0.00014637435,0.0001086631,0.00021216864,0.00055681646,0.0000018566349,0.00027495323,0.0002229423,0.0000013160462],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002877354,0.00004466865,0.009831502,0.00003084672,0.000022666058,0.0000019143642,0.000051568146,0.0000012528046,0.987159,0.0015654742,0.00006454241,0.0011977801],"study_design_scores_gemma":[0.0004446445,0.0003471624,0.0049237297,0.0000215198,0.000015482672,0.000025709985,0.000035382465,0.0000053891467,0.97767645,0.00085903995,0.015482637,0.0001628497],"about_ca_topic_score_codex":0.00001819359,"about_ca_topic_score_gemma":0.000012634031,"teacher_disagreement_score":0.41943234,"about_ca_system_score_codex":0.000014488237,"about_ca_system_score_gemma":0.000112204034,"threshold_uncertainty_score":0.5968973},"labels":[],"label_agreement":null},{"id":"W2896929167","doi":"10.1007/978-1-4939-8805-1_15","title":"Pooled Lentiviral CRISPR-Cas9 Screens for Functional Genomics in Mammalian Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":35,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Institute for Advanced Research; University of Toronto","funders":"Canadian Institutes of Health Research; Canada Research Chairs; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"CRISPR; Functional genomics; Cas9; Gene knockout; Biology; Computational biology; Gene; Genome editing; Guide RNA; Genetic screen; Genomics; Drug discovery; Function (biology); Genetics; Phenotype; Genome; Bioinformatics","score_opus":0.02085657723877584,"score_gpt":0.4020531646386547,"score_spread":0.3811965873998789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2896929167","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14730987,0.0006327648,0.8507719,0.00009410885,0.000514779,0.0003006947,0.000023009232,0.0000091905595,0.000343702],"genre_scores_gemma":[0.25187418,0.000042403743,0.74670875,0.0005053232,0.00036752556,0.000095104144,0.00012855502,0.00004705294,0.00023107341],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832237,0.00028484783,0.00033691482,0.0005448505,0.000046329173,0.00046467182],"domain_scores_gemma":[0.99942136,0.000043501062,0.00005562605,0.0003513133,0.00006808145,0.000060094106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008387345,0.00021322802,0.00024864668,0.0001665153,0.00003959277,0.0000117144455,0.00021009563,0.00032422962,0.000026229516],"category_scores_gemma":[0.00017364675,0.00022986475,0.00013054315,0.00015217061,0.00014306979,0.0000020633663,0.00013983672,0.00013302216,0.000006263735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012116018,0.000039704486,0.0010851428,0.000012256237,0.000031662126,0.000004036787,0.00002770711,0.00041018415,0.98913026,0.0004680375,0.00016715452,0.008502673],"study_design_scores_gemma":[0.00096018845,0.00039106206,0.0014390877,0.0000062778035,0.000016709162,0.0000091366,0.00004027782,0.0010191051,0.9631652,0.0011869301,0.031498842,0.00026718856],"about_ca_topic_score_codex":0.000037415928,"about_ca_topic_score_gemma":0.00014475625,"teacher_disagreement_score":0.104564324,"about_ca_system_score_codex":0.00003279989,"about_ca_system_score_gemma":0.000057282534,"threshold_uncertainty_score":0.93736124},"labels":[],"label_agreement":null},{"id":"W2897004029","doi":"10.1007/978-1-4939-8728-3_16","title":"Constructing and Analyzing Microbiome Networks in R","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"","keywords":"Microbiome; Computational biology; Operational taxonomic unit; Dysbiosis; Human Microbiome Project; Biology; Function (biology); Computer science; Network theory; Human microbiome; Ecology; Evolutionary biology; Bioinformatics; Genetics; Bacteria","score_opus":0.010609325789916198,"score_gpt":0.33671600583339234,"score_spread":0.32610668004347615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897004029","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17377228,0.0015427839,0.82315534,0.000060963688,0.00020318752,0.000120325174,0.0000027666315,0.0000054291168,0.0011369121],"genre_scores_gemma":[0.3882596,0.000104099425,0.61097294,0.00043847132,0.00013415904,0.00000958603,0.000039353672,0.00001667469,0.000025144276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985366,0.0003574808,0.00035888265,0.00034882023,0.00002005123,0.00037815416],"domain_scores_gemma":[0.99953085,0.000038254406,0.00009241329,0.0002552973,0.000032116455,0.000051046944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001130972,0.00016030163,0.0002383925,0.00014547977,0.000037192898,0.000017388626,0.00015952098,0.00032628482,0.000009179286],"category_scores_gemma":[0.00010678498,0.00015999425,0.00004430739,0.00022922862,0.00035057316,0.000002323743,0.00023936172,0.00018362202,0.0000012383106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039300874,0.000014953804,0.027692873,0.0000099403005,0.0000325259,0.0000063263305,0.00006165647,0.00007352223,0.8538718,0.003198453,0.000029827741,0.11496877],"study_design_scores_gemma":[0.007487633,0.0021173107,0.008132042,0.0002614087,0.00009032894,0.0007081746,0.0012651641,0.08182823,0.8151921,0.04774556,0.03205568,0.0031163867],"about_ca_topic_score_codex":0.000030098092,"about_ca_topic_score_gemma":0.00014083202,"teacher_disagreement_score":0.21448731,"about_ca_system_score_codex":0.000019532185,"about_ca_system_score_gemma":0.000024645793,"threshold_uncertainty_score":0.6524376},"labels":[],"label_agreement":null},{"id":"W2897038228","doi":"10.1007/978-1-4939-8669-9_19","title":"Cell-Specific Markers for the Identification of Retinal Cells and Subcellular Organelles by Immunofluorescence Microscopy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research; Health Canada; National Institutes of Health","keywords":"Immunofluorescence; Retina; Biology; Retinal; Cell biology; Fluorescence microscope; Organelle; Confocal microscopy; Antibody; Cell; Cell type; Protein subcellular localization prediction; Fluorescence; Biochemistry; Immunology; Neuroscience","score_opus":0.00827755114142421,"score_gpt":0.3215008237386339,"score_spread":0.3132232725972097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897038228","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2689569,0.010579681,0.71968603,0.00011188396,0.00022107322,0.00033671805,0.000016578384,0.0000035196374,0.00008762878],"genre_scores_gemma":[0.4169511,0.0044058296,0.57761663,0.00020300808,0.000060675695,0.00008688787,0.00016276597,0.00004223793,0.00047089736],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986307,0.00032387974,0.00037520938,0.0003905486,0.000049679864,0.00022997549],"domain_scores_gemma":[0.99929243,0.00009251768,0.00016526511,0.000323159,0.00009970414,0.00002694073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012444963,0.0001488317,0.00016172518,0.000049480717,0.00008121507,0.000015347654,0.00028731287,0.00017422937,0.000012272599],"category_scores_gemma":[0.00013030846,0.00012131308,0.000060778195,0.00012538218,0.0005411378,0.0000020101888,0.00010473612,0.000069603884,0.0000016074403],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022697037,0.000025963336,0.0014389851,0.00002054297,0.000019347857,3.1461624e-7,0.000055967364,0.0000010451736,0.9936823,0.00010853197,0.0019075072,0.002512479],"study_design_scores_gemma":[0.00038140418,0.0002523302,0.00048339186,0.000005952675,0.000012356715,0.0000021708588,0.0001285826,0.000059585404,0.96758133,0.00047594006,0.030477958,0.00013902542],"about_ca_topic_score_codex":0.000014498554,"about_ca_topic_score_gemma":0.0000011871401,"teacher_disagreement_score":0.14799419,"about_ca_system_score_codex":0.0000075964217,"about_ca_system_score_gemma":0.00003328135,"threshold_uncertainty_score":0.4947004},"labels":[],"label_agreement":null},{"id":"W2897049273","doi":"10.1007/978-1-4939-8728-3_5","title":"Methods and Strategies to Examine the Human Breastmilk Microbiome","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Ottawa; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Microbiome; Computational biology; Metagenomics; DNA sequencing; Human Microbiome Project; Biology; Human microbiome; Gut microbiome; Bioinformatics; Genetics; DNA; Gene","score_opus":0.025574433038433157,"score_gpt":0.45664719978817503,"score_spread":0.4310727667497419,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897049273","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.357953,0.0011244696,0.6388658,0.000625755,0.00018881957,0.00029690485,0.000010561166,0.000012525221,0.00092212635],"genre_scores_gemma":[0.10561575,0.00005353686,0.89104944,0.0027191208,0.00019989231,0.00004257248,0.00004271319,0.000034076977,0.00024289389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99659455,0.0019294004,0.00033122863,0.0006243823,0.000033554203,0.00048689262],"domain_scores_gemma":[0.99908364,0.000063300635,0.00007728261,0.0005875027,0.00008405918,0.00010420551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022589692,0.00024197224,0.00029034866,0.00013799536,0.00015913228,0.00003724696,0.00037097756,0.00029408257,0.000031536227],"category_scores_gemma":[0.00016228849,0.00018316826,0.00006484012,0.00026324496,0.0005156478,0.0000027692352,0.00039596608,0.00018086587,0.0000074763784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024513824,0.000025804875,0.0005079638,0.000012079026,0.00003079903,0.000002134203,0.00015510857,0.0000012906913,0.98165995,0.0031584392,0.00018475339,0.0142371785],"study_design_scores_gemma":[0.00043388194,0.00075736304,0.008765701,0.000011810657,0.000017579665,0.00008821453,0.00019450365,0.000007837763,0.8982021,0.003612901,0.08761846,0.00028964033],"about_ca_topic_score_codex":0.0001471758,"about_ca_topic_score_gemma":0.00015826254,"teacher_disagreement_score":0.25233725,"about_ca_system_score_codex":0.000017325714,"about_ca_system_score_gemma":0.00007575859,"threshold_uncertainty_score":0.74693847},"labels":[],"label_agreement":null},{"id":"W2897106627","doi":"10.1007/978-1-4939-8728-3_14","title":"Subsampled Assemblies and Hybrid Nucleotide Composition/Differential Coverage Binning for Genome-Resolved Metagenomics","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Metagenomics; Genome; Contig; Computational biology; Biology; Sequence assembly; Reference genome; Data mining; Computer science; Genetics; Gene","score_opus":0.023924306042406557,"score_gpt":0.34481458156887534,"score_spread":0.32089027552646876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897106627","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48740008,0.0011144187,0.51086015,0.000047980244,0.00018135483,0.00024296955,0.000055492026,0.0000038287635,0.00009369919],"genre_scores_gemma":[0.61710924,0.00029087547,0.38179302,0.00034570706,0.00020488423,0.00006268818,0.00013763484,0.000034367193,0.000021564128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981391,0.0004143379,0.0003604605,0.0006195853,0.000043338092,0.00042320738],"domain_scores_gemma":[0.9992391,0.00010714169,0.000121643534,0.00034618517,0.00011301957,0.00007292199],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006168261,0.00026715308,0.00039777707,0.00012369065,0.0001637741,0.000034690693,0.0002296686,0.00016081212,0.0000127458225],"category_scores_gemma":[0.00016401606,0.00026604545,0.0001293609,0.00008075433,0.00032045625,0.0000010986873,0.00030471385,0.00009233193,0.0000013957209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015268484,0.000034465345,0.0012310782,0.000014797594,0.0001776143,0.000002350652,0.000058671456,0.000040856397,0.99297947,0.0009927688,0.000020535488,0.0042946916],"study_design_scores_gemma":[0.0013902938,0.00071714557,0.0029859317,0.00000593436,0.00007364911,0.000018407716,0.00003067213,0.0004873483,0.96636355,0.0071758055,0.020337326,0.00041396133],"about_ca_topic_score_codex":0.000026952943,"about_ca_topic_score_gemma":0.000021332451,"teacher_disagreement_score":0.12970915,"about_ca_system_score_codex":0.000017799885,"about_ca_system_score_gemma":0.000036112087,"threshold_uncertainty_score":0.9999792},"labels":[],"label_agreement":null},{"id":"W2897117792","doi":"10.1007/978-1-4939-8805-1_4","title":"Bioinformatic Strategies for the Genomic and Epigenomic Characterization of Brain Tumors","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Epigenomics; DNA methylation; Computational biology; Biology; Genomics; Identification (biology); Gene expression profiling; Gene; Genetics; Evolutionary biology; Gene expression; Genome","score_opus":0.02419292163398892,"score_gpt":0.37902861333420657,"score_spread":0.35483569170021767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897117792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64453924,0.00021314724,0.35433638,0.0004087249,0.0000552705,0.00037848062,0.0000067667033,0.0000046377995,0.000057333797],"genre_scores_gemma":[0.72391796,0.000052581865,0.27537414,0.00048154854,0.00003698445,0.00009154892,0.000029916939,0.000009717753,0.0000055904147],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994122,0.00012593954,0.00021535109,0.000107888736,0.000019142519,0.00011949512],"domain_scores_gemma":[0.9994717,0.0002293984,0.00008462786,0.00015248841,0.000041850126,0.000019898098],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005033138,0.00007601056,0.0002046429,0.00009087418,0.000028060113,0.0000061599676,0.000047274585,0.00005455512,0.000010015947],"category_scores_gemma":[0.00014584663,0.000048056314,0.000039805836,0.000078508434,0.00017304585,0.000014741829,0.000027227683,0.000033242228,0.0000010623502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039455794,0.000025965212,0.003540943,0.000033102264,0.000045316607,0.0000013984757,0.00045235275,0.0000010861268,0.969298,0.0048680706,0.0000023356115,0.021691993],"study_design_scores_gemma":[0.0023106262,0.0014955149,0.17624354,0.000059228252,0.00013361353,0.000036727768,0.0005789113,0.0034106665,0.80488604,0.008310519,0.0023886587,0.00014595842],"about_ca_topic_score_codex":0.000020622334,"about_ca_topic_score_gemma":0.000004457801,"teacher_disagreement_score":0.1727026,"about_ca_system_score_codex":0.000016764605,"about_ca_system_score_gemma":0.000041796226,"threshold_uncertainty_score":0.19596796},"labels":[],"label_agreement":null},{"id":"W2897152552","doi":"10.1007/978-1-4939-8669-9_14","title":"Generation and Analysis of Xenopus laevis Models of Retinal Degeneration Using CRISPR/Cas9","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Xenopus; CRISPR; Gene knockdown; Cas9; Genome editing; Biology; Computational biology; Gene knockout; Transgene; Model organism; Gene; Genetics; Gene knockin; Point mutation; Mutation","score_opus":0.044285326377180904,"score_gpt":0.4513800128831154,"score_spread":0.4070946865059345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897152552","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4650532,0.0008291167,0.53397423,0.0000057141915,0.000044211465,0.000048068596,0.0000066856146,0.0000015133013,0.000037250316],"genre_scores_gemma":[0.5451243,0.00006895448,0.45467755,0.000023904991,0.00004187265,0.0000031602528,0.000048487538,0.00000739984,0.00000437307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884176,0.00033239994,0.00033480523,0.00029623555,0.00004938037,0.00014541892],"domain_scores_gemma":[0.99946004,0.000016291655,0.00010772996,0.00026088956,0.00012502166,0.000029998128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063450565,0.00011544736,0.00028009267,0.00024382875,0.000022587494,0.0000042265797,0.0000849203,0.00017888892,0.000006911903],"category_scores_gemma":[0.00012298475,0.00011794488,0.000080578226,0.0003363661,0.00013758421,0.0000024908875,0.00007599842,0.00004722519,5.382532e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020330783,0.000015520944,0.0023360455,0.0000112789285,0.0001352888,5.1039456e-7,0.00006446582,0.016499577,0.97770286,0.00061116175,0.0000025119743,0.002600446],"study_design_scores_gemma":[0.00014456772,0.00018062198,0.0002684536,0.000003969227,0.00015573978,0.0000034248592,0.00001391016,0.17743137,0.8214092,0.00024826228,0.00004877499,0.00009168054],"about_ca_topic_score_codex":0.00006104619,"about_ca_topic_score_gemma":0.00004766045,"teacher_disagreement_score":0.1609318,"about_ca_system_score_codex":0.00000867933,"about_ca_system_score_gemma":0.000026517537,"threshold_uncertainty_score":0.4809653},"labels":[],"label_agreement":null},{"id":"W2897165899","doi":"10.1007/978-1-4939-8728-3_3","title":"Characterization of Eukaryotic Microbiome Using 18S Amplicon Sequencing","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Amplicon; Biology; 18S ribosomal RNA; Computational biology; Microbiome; Hypervariable region; Multicellular organism; Ribosomal RNA; DNA sequencing; Evolutionary biology; 16S ribosomal RNA; Human microbiome; Genetics; Gene; Polymerase chain reaction","score_opus":0.036910588441825494,"score_gpt":0.3990132278294325,"score_spread":0.362102639387607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897165899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56612265,0.000105809406,0.4333742,0.000021444333,0.00016374887,0.00012389214,0.000011848152,0.000004827237,0.00007156596],"genre_scores_gemma":[0.50461537,0.000041101724,0.4944342,0.0005390338,0.00012678312,0.0000060868515,0.00016967744,0.00002949665,0.000038268525],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981661,0.00063967623,0.00040040314,0.00041925893,0.000031425323,0.0003431604],"domain_scores_gemma":[0.9992688,0.000014705241,0.0001836886,0.00037136022,0.000112109505,0.000049355265],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072739663,0.00016754666,0.00028060065,0.00017506514,0.000047250694,0.0000067620945,0.0002014458,0.0003049523,0.000024644161],"category_scores_gemma":[0.000110692396,0.00017158147,0.000076815595,0.00025313275,0.00026093007,0.0000028686472,0.00013941932,0.0001010981,0.0000037162606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003315363,0.000024144081,0.0031568941,0.00003188126,0.000021526523,0.000001670235,0.00006252923,0.000004171237,0.9949945,0.00029302065,0.00000251248,0.0013739876],"study_design_scores_gemma":[0.00031300247,0.00027965062,0.0030820407,0.000025942667,0.0000125608185,0.000035337725,0.000016077975,0.00012801726,0.9944138,0.0002582959,0.0012654465,0.00016981641],"about_ca_topic_score_codex":0.00007041419,"about_ca_topic_score_gemma":0.000017223476,"teacher_disagreement_score":0.061507326,"about_ca_system_score_codex":0.00004860528,"about_ca_system_score_gemma":0.00015229177,"threshold_uncertainty_score":0.699689},"labels":[],"label_agreement":null},{"id":"W2897187557","doi":"10.1007/978-1-4939-8728-3_6","title":"Quantification of Vitamin B12-Related Proteins in Marine Microbial Systems Using Selected Reaction Monitoring Mass Spectrometry","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Mass spectrometry; Computational biology; Vitamin B12; Chemistry; Proteomics; Selected reaction monitoring; Biology; Chromatography; Biochemistry; Environmental chemistry; Tandem mass spectrometry","score_opus":0.02460713548546498,"score_gpt":0.37706581172350084,"score_spread":0.35245867623803584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897187557","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4505701,0.00002739159,0.5489306,0.0000085445445,0.00006341067,0.00020686659,0.0000038978246,0.000033864824,0.00015533253],"genre_scores_gemma":[0.361325,0.000013189919,0.63848424,0.0000011373999,0.000035672227,0.000074593256,0.000024614521,0.000017393415,0.000024135134],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985898,0.00024819406,0.0005189472,0.00036748027,0.000046750705,0.00022882287],"domain_scores_gemma":[0.9991433,0.000060657192,0.0002857738,0.0003748228,0.00011282677,0.000022607544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006102577,0.00013704333,0.00027047578,0.00025367166,0.00003408663,0.000007064285,0.00017367226,0.0003131797,0.000014295723],"category_scores_gemma":[0.0002083488,0.0001526354,0.000035675224,0.00081557874,0.00010330337,0.000030647643,0.00006318709,0.00029765585,0.0000010959582],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027405385,0.000050263192,0.0055093956,0.000044236298,0.000013290623,0.0000016925117,0.000022051358,0.00006172809,0.9915953,0.0011700683,1.994204e-7,0.001504337],"study_design_scores_gemma":[0.0002472238,0.000036517926,0.00038087653,0.000067706584,0.000009503706,0.000012438497,0.000029957244,0.0023004329,0.99376506,0.0029610384,0.00005249851,0.00013676041],"about_ca_topic_score_codex":0.00039134332,"about_ca_topic_score_gemma":0.000005683188,"teacher_disagreement_score":0.089553684,"about_ca_system_score_codex":0.00021134087,"about_ca_system_score_gemma":0.00003485936,"threshold_uncertainty_score":0.62242913},"labels":[],"label_agreement":null},{"id":"W2897286719","doi":"10.1007/978-1-4939-8805-1_20","title":"Cellular Magnetic Resonance Imaging for Tracking Metastatic Cancer Cells in the Brain","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Communication and Nanonetworks","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"","keywords":"Magnetic resonance imaging; In vivo; Cancer cell; Iron oxide nanoparticles; Cell; Tracking (education); Biomedical engineering; Cancer; Materials science; Nuclear magnetic resonance; Chemistry; Nanoparticle; Medicine; Nanotechnology; Biology; Radiology; Physics; Psychology; Internal medicine; Biochemistry","score_opus":0.028454874561559425,"score_gpt":0.37090545242972256,"score_spread":0.34245057786816313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897286719","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0040972647,0.029917708,0.9642068,0.00049474544,0.00026348207,0.0004241364,0.0000057891734,0.000035563215,0.0005544967],"genre_scores_gemma":[0.13068616,0.0002863276,0.86659706,0.00190961,0.00006077802,0.00037192742,0.000011280996,0.000049560007,0.000027292808],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977762,0.0012656614,0.00031428636,0.00022855932,0.000052904838,0.0003623571],"domain_scores_gemma":[0.99887663,0.0005322899,0.000035607343,0.0004984612,0.00003258556,0.00002443644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020045724,0.00015573831,0.00022316209,0.00014522734,0.00004358453,0.000020641175,0.0004864006,0.00007518694,0.00003620927],"category_scores_gemma":[0.00015280436,0.00013431841,0.00006960046,0.00041559016,0.00012538476,0.000021846978,0.0000485046,0.00024263519,0.000003016773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008634582,0.000015652886,0.0001639254,0.000018031717,0.0000056840477,0.000011181176,0.0003990868,0.00088389014,0.7971046,0.0016058767,0.00017712572,0.1996063],"study_design_scores_gemma":[0.0011870202,0.000101488426,0.00044227217,0.000081995,0.000030764542,0.000009857488,0.00014356722,0.2719108,0.5526438,0.010221481,0.16277589,0.0004511064],"about_ca_topic_score_codex":0.000043334443,"about_ca_topic_score_gemma":0.00010200015,"teacher_disagreement_score":0.2710269,"about_ca_system_score_codex":0.000040031104,"about_ca_system_score_gemma":0.000016613441,"threshold_uncertainty_score":0.54773456},"labels":[],"label_agreement":null},{"id":"W2897295251","doi":"10.1007/978-1-4939-8772-6_16","title":"Modelling Time-Dependent Acquisition of Positional Information","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Morphogen; Python (programming language); Computer science; Bistability; Computation; Epigenetics; Biology; Gene; Programming language; Physics; Genetics","score_opus":0.009868347373742469,"score_gpt":0.3306870006800276,"score_spread":0.3208186533062851,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897295251","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22933964,0.00011398356,0.76905346,0.000044510998,0.00009487699,0.0001023994,0.000011209412,0.0000056741283,0.0012342292],"genre_scores_gemma":[0.45051834,0.000018685292,0.54845226,0.00029102396,0.000060004975,0.000014979434,0.0005763354,0.000006824599,0.00006151575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893177,0.00035629072,0.00030429577,0.00019459927,0.000051969968,0.00016110775],"domain_scores_gemma":[0.99956566,0.000016678545,0.00011170499,0.00016741507,0.000112825364,0.000025738002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006863758,0.00010573038,0.00013534546,0.00012143285,0.000036745434,0.0000040937357,0.0001161174,0.00026141238,0.00005408773],"category_scores_gemma":[0.00004491761,0.00010548998,0.000050821465,0.00010728371,0.0001663796,0.0000071170252,0.00008789142,0.000054609838,0.000023961433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010800003,0.000022622287,0.00080237864,0.000005368098,0.000026384228,3.528719e-7,0.000028484717,0.0016788658,0.9887116,0.001022441,0.000021827065,0.00757169],"study_design_scores_gemma":[0.00036996813,0.00030394053,0.0007242334,0.000008527923,0.0000069366797,0.000015449119,0.000011665316,0.0040420503,0.9876199,0.005252369,0.001510946,0.0001340293],"about_ca_topic_score_codex":0.000010307328,"about_ca_topic_score_gemma":0.0000012837029,"teacher_disagreement_score":0.2211787,"about_ca_system_score_codex":0.000016495445,"about_ca_system_score_gemma":0.000042300268,"threshold_uncertainty_score":0.43017563},"labels":[],"label_agreement":null},{"id":"W2897322335","doi":"10.1007/978-1-4939-8728-3_11","title":"Predicting the Functional Potential of the Microbiome from Marker Genes Using PICRUSt","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":249,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Genome; Biology; Metagenomics; Computational biology; Gene; Taxon; Microbiome; Evolutionary biology; Phylogenetics; Genetics; Ecology","score_opus":0.021924909221405445,"score_gpt":0.3218194195309742,"score_spread":0.29989451030956876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897322335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77766824,0.0022896118,0.21892336,0.000086921646,0.0007337988,0.00012830082,0.000034867673,0.000001305513,0.00013360199],"genre_scores_gemma":[0.81871873,0.000060580966,0.18043523,0.0003324874,0.0003724338,0.000010555756,0.000014482391,0.000017323084,0.000038165897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984192,0.000700739,0.00026734592,0.00032139182,0.000051141647,0.00024016685],"domain_scores_gemma":[0.9992878,0.000045589382,0.00013319844,0.0004238238,0.00009076226,0.000018822919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061631674,0.00014157627,0.0001640922,0.000033206838,0.00014259176,0.0000073544284,0.0003194761,0.00016811104,0.00002333019],"category_scores_gemma":[0.00013180585,0.00008993453,0.00013116436,0.00013086082,0.00053361437,3.988014e-7,0.00051613426,0.000093448434,7.5454335e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042356885,0.00001583805,0.034231275,0.000002500713,0.00010882872,4.3415616e-7,0.000034263616,0.00013957547,0.9631853,0.00007470361,0.000019780065,0.0021451546],"study_design_scores_gemma":[0.00030460686,0.00008495698,0.04791969,0.000007298435,0.000046617293,0.000014486959,0.000090113324,0.00051410793,0.9450067,0.0012619788,0.0046267477,0.00012266316],"about_ca_topic_score_codex":0.00021910883,"about_ca_topic_score_gemma":0.000043421358,"teacher_disagreement_score":0.041050524,"about_ca_system_score_codex":0.000010503605,"about_ca_system_score_gemma":0.000058681027,"threshold_uncertainty_score":0.36674237},"labels":[],"label_agreement":null},{"id":"W2897410958","doi":"10.1007/978-1-4939-8728-3_9","title":"Processing a 16S rRNA Sequencing Dataset with the Microbiome Helper Workflow","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Workflow; Microbiome; Scripting language; Computational biology; Metagenomics; Computer science; Pipeline (software); Biology; 16S ribosomal RNA; Data science; World Wide Web; Bioinformatics; Genetics; Database; Bacteria; Gene","score_opus":0.02388244169054871,"score_gpt":0.3560488101666024,"score_spread":0.3321663684760537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897410958","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40698552,0.004604045,0.58649325,0.00066384964,0.0001828623,0.00034731594,0.00011362216,0.000006841837,0.00060264627],"genre_scores_gemma":[0.31565017,0.00008614958,0.6812437,0.0023542335,0.000256059,0.000067309156,0.00021499337,0.000041718635,0.000085686515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99828714,0.00049274246,0.00021368897,0.00053867215,0.000049709688,0.0004180223],"domain_scores_gemma":[0.9992071,0.000032477168,0.00009669734,0.0005332365,0.000086053384,0.000044465276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008432263,0.00022753478,0.00022369767,0.00006500632,0.00015355568,0.000026990476,0.00039578715,0.00017012806,0.000010698467],"category_scores_gemma":[0.00008279262,0.00014995834,0.000050295563,0.00023625448,0.00056628254,8.79901e-7,0.00029126144,0.00013741065,0.0000050697877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057433328,0.000014551081,0.0010514426,0.000008287682,0.00005938291,0.0000064612896,0.00012504603,0.000022750808,0.98416424,0.000064220476,0.00034202196,0.01408414],"study_design_scores_gemma":[0.000561067,0.0005519464,0.0006042638,0.000022386403,0.00003770452,0.00008522087,0.00019435021,0.00009685096,0.8725069,0.0007605317,0.124208674,0.0003700821],"about_ca_topic_score_codex":0.000038724676,"about_ca_topic_score_gemma":0.0001136544,"teacher_disagreement_score":0.123866655,"about_ca_system_score_codex":0.000023157825,"about_ca_system_score_gemma":0.00010464271,"threshold_uncertainty_score":0.61151236},"labels":[],"label_agreement":null},{"id":"W2897464952","doi":"10.1007/978-1-4939-8760-3_19","title":"A Cell-Free Content Mixing Assay for SNARE-Mediated Multivesicular Body-Vacuole Membrane Fusion","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; University of Alberta","funders":"","keywords":"Vacuole; Lipid bilayer fusion; Cell biology; Lysosome; Endosome; Organelle; Endocytosis; Biology; Vesicle; Membrane; Chemistry; Cell; Biochemistry; Cytoplasm; Intracellular; Enzyme","score_opus":0.02529913237930887,"score_gpt":0.3310248480988365,"score_spread":0.3057257157195276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897464952","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16514264,0.0013079977,0.8316977,0.0001877198,0.00039326877,0.0006448903,0.000049554903,0.00002586442,0.00055038626],"genre_scores_gemma":[0.2586537,0.00023729331,0.7340614,0.0008792017,0.00037848888,0.00024267824,0.0050631175,0.00009553423,0.00038856105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99716085,0.00085144996,0.0004968742,0.0008158457,0.00010741664,0.0005675494],"domain_scores_gemma":[0.99866533,0.00011170422,0.00016038046,0.0007206646,0.00022246515,0.000119447075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018210659,0.00033015184,0.00041483023,0.00015869201,0.00011306777,0.00001578742,0.00045127125,0.00058032986,0.0000601781],"category_scores_gemma":[0.00075538154,0.00031410786,0.0002742722,0.00019950049,0.00026333678,0.0000046176897,0.00017224775,0.00017366683,0.0000070078386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031990773,0.00012147307,0.001052355,0.00003949563,0.00005737754,0.000014576026,0.00008374928,0.00001087372,0.9962781,0.0003157613,0.000053649164,0.0016526674],"study_design_scores_gemma":[0.002494971,0.00076797826,0.00051642524,0.000017256856,0.000044280285,0.000008916,0.00007996479,0.0013551516,0.9450669,0.00053307106,0.048734564,0.0003804959],"about_ca_topic_score_codex":0.00006196907,"about_ca_topic_score_gemma":0.000051543502,"teacher_disagreement_score":0.09763627,"about_ca_system_score_codex":0.000030219024,"about_ca_system_score_gemma":0.00006534928,"threshold_uncertainty_score":0.9999311},"labels":[],"label_agreement":null},{"id":"W2897560238","doi":"10.1007/978-1-4939-8805-1_11","title":"Cell Cycle Dynamics in Glioma Cancer Stem Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"","keywords":"Cancer stem cell; Biology; Stem cell; Cell cycle; Cancer cell; Cancer; Asymmetric cell division; Tumor initiation; Cell; Cancer research; Neuroscience; Population; Cell division; Metastasis; Cell biology; Genetics; Medicine","score_opus":0.02265495214381154,"score_gpt":0.4044101260106984,"score_spread":0.3817551738668869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897560238","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5167785,0.0034348848,0.4704485,0.0004982969,0.0010034865,0.00043794487,0.000027412607,0.000029851639,0.0073411088],"genre_scores_gemma":[0.21137393,0.00035517017,0.78620267,0.0012367327,0.00015459265,0.000085377214,0.000011333027,0.00004853544,0.00053165044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982789,0.0005291868,0.00032137867,0.0004084945,0.00006927334,0.00039275017],"domain_scores_gemma":[0.9993562,0.000071461014,0.00007444865,0.00035736087,0.000054235592,0.00008629059],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079502445,0.00016289073,0.00043422516,0.00027768427,0.000018520552,0.0000052742284,0.00012951966,0.00020076463,0.00018959166],"category_scores_gemma":[0.000024726867,0.00014722417,0.00008976934,0.00053080556,0.00021013025,0.000012965099,0.00008778195,0.00023127056,0.000016546734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010500227,0.00010117108,0.0042221034,0.000051266095,0.000019977106,0.00012834017,0.000110584246,0.000018316654,0.9048396,0.0006310436,0.000056959816,0.08971566],"study_design_scores_gemma":[0.0014206773,0.00029438725,0.00029818885,0.000041285442,0.00004198178,0.000016898774,0.00013531267,0.001857496,0.9856267,0.0010540066,0.009037367,0.00017570662],"about_ca_topic_score_codex":0.0011178952,"about_ca_topic_score_gemma":0.0007461228,"teacher_disagreement_score":0.3157542,"about_ca_system_score_codex":0.00031665168,"about_ca_system_score_gemma":0.00010965079,"threshold_uncertainty_score":0.6003628},"labels":[],"label_agreement":null},{"id":"W2897766421","doi":"10.1007/978-1-4939-8728-3_8","title":"16S rRNA Gene Analysis with QIIME2","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":629,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Phylogenetic tree; Biology; Taxonomic rank; 16S ribosomal RNA; Metagenomics; Phylogenetic diversity; Computational biology; Phylogenetics; Tree (set theory); Gene; Ecology; Genetics; Mathematics","score_opus":0.014621595678184067,"score_gpt":0.3630929429158632,"score_spread":0.34847134723767914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897766421","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44174272,0.00003309796,0.5502641,0.00011860547,0.00006711768,0.000086913096,0.0000026770385,0.000016258346,0.007668464],"genre_scores_gemma":[0.3440905,0.0000068667737,0.6545484,0.0011842601,0.000018137525,0.000011528439,0.000025902913,0.000008125676,0.00010626768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970166,0.002125444,0.00017669024,0.00033263257,0.00003132397,0.0003172871],"domain_scores_gemma":[0.99923205,0.00015417776,0.00006822318,0.0004877036,0.0000111459,0.00004669491],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009329964,0.00013124714,0.00029926686,0.0001194531,0.00010009594,0.0000039601364,0.00039474806,0.00019608282,0.0047115455],"category_scores_gemma":[0.00008565588,0.000106989944,0.00006956235,0.0008364898,0.0008864318,0.000020843989,0.00031601544,0.000233541,0.00016708675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052076826,0.000051842926,0.05024681,7.897799e-7,0.00012906696,0.000010466232,0.00013728162,0.00026175886,0.94484216,0.0005897896,0.00006878418,0.003609195],"study_design_scores_gemma":[0.0010678737,0.001871042,0.15908785,0.0000044744934,0.0004091385,0.000049525923,0.0000617615,0.0012746069,0.7607365,0.032735284,0.041899294,0.0008026071],"about_ca_topic_score_codex":0.0005295886,"about_ca_topic_score_gemma":0.0023639114,"teacher_disagreement_score":0.18410559,"about_ca_system_score_codex":0.000047248956,"about_ca_system_score_gemma":0.000009269828,"threshold_uncertainty_score":0.9961983},"labels":[],"label_agreement":null},{"id":"W2897889083","doi":"10.1007/978-1-4939-8805-1_6","title":"Flow Cytometric Analysis of Brain Tumor Stem Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University","funders":"","keywords":"Flow cytometry; Cancer stem cell; Stem cell; Computational biology; Population; Biology; Cell biology; Molecular biology; Medicine","score_opus":0.03365578012285116,"score_gpt":0.41840445183815517,"score_spread":0.384748671715304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897889083","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14848141,0.0010999352,0.84861803,0.00016299088,0.0002425187,0.00018435204,0.000025466938,0.000014365114,0.0011709136],"genre_scores_gemma":[0.07383286,0.000045612414,0.92451966,0.0012558512,0.000056791087,0.0000150013575,0.000013658072,0.000018154402,0.00024243082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980773,0.0007619244,0.0004118777,0.0003712954,0.000100908816,0.00027669972],"domain_scores_gemma":[0.9988773,0.00030367062,0.00013336928,0.0004800532,0.00011892846,0.000086712076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017271462,0.00013844212,0.00079516554,0.0016996477,0.0000153925,0.0000032305877,0.00013254149,0.0001107637,0.00035648755],"category_scores_gemma":[0.00025085633,0.00011686682,0.0002918515,0.0043754857,0.00020570916,0.000008759277,0.00007488909,0.00013482959,0.00000818281],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008108854,0.00007426978,0.0037013493,0.000029824685,0.00060690835,0.000034503093,0.00007678661,0.000036547404,0.88020855,0.00015857033,0.00007366818,0.114917934],"study_design_scores_gemma":[0.00073035,0.0005306245,0.0016929191,0.000013107443,0.00097003166,0.000008933842,0.000045393983,0.002489941,0.97981864,0.00015578653,0.0134211555,0.00012309823],"about_ca_topic_score_codex":0.00011941989,"about_ca_topic_score_gemma":0.00002745626,"teacher_disagreement_score":0.114794835,"about_ca_system_score_codex":0.000057112124,"about_ca_system_score_gemma":0.00006737991,"threshold_uncertainty_score":0.47656903},"labels":[],"label_agreement":null},{"id":"W2897897041","doi":"10.1007/978-1-4939-8772-6_10","title":"Live Imaging of mRNA Transcription in Drosophila Embryos","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Agence Nationale de la Recherche","keywords":"Live cell imaging; Drosophila melanogaster; Embryo; Biology; Confocal; Cell biology; Messenger RNA; Transcription (linguistics); Developmental biology; Computational biology; Fluorescence microscope; RNA; Genetics; Fluorescence; Gene; Cell; Physics; Optics","score_opus":0.02096823506156954,"score_gpt":0.3874232708231019,"score_spread":0.3664550357615324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897897041","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.64555633,0.0010271457,0.35226938,0.00011929038,0.000084456784,0.0001508542,0.000003209522,0.000004227029,0.00078509934],"genre_scores_gemma":[0.73430383,0.00013016275,0.26506844,0.0002433629,0.000074663556,0.000025075533,0.000025023088,0.000019157158,0.00011030907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979909,0.0008545333,0.00032849816,0.00039214917,0.00006615498,0.00036776884],"domain_scores_gemma":[0.9994583,0.000031600397,0.00006679525,0.00031037937,0.00007956241,0.00005333427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012334649,0.00013612249,0.00023438911,0.00020647273,0.000023550958,0.000005921002,0.0002469928,0.00017292754,0.000024968629],"category_scores_gemma":[0.0002973687,0.00013407302,0.00008654724,0.00021960815,0.0002923948,0.0000030922965,0.000094502044,0.00016022618,0.0000039773226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010095657,0.000044448727,0.013455155,0.000012976086,0.000013089564,0.000011814382,0.0000718621,0.000011809283,0.9671795,0.00047730436,0.000012029173,0.018609077],"study_design_scores_gemma":[0.0006770942,0.00036075804,0.004199736,0.000024303698,0.0000043261903,0.000012796488,0.000069727306,0.00092234206,0.9897648,0.00265201,0.0011633208,0.0001487586],"about_ca_topic_score_codex":0.00018042275,"about_ca_topic_score_gemma":0.00006640709,"teacher_disagreement_score":0.08874746,"about_ca_system_score_codex":0.000020028032,"about_ca_system_score_gemma":0.00005529338,"threshold_uncertainty_score":0.5467339},"labels":[],"label_agreement":null},{"id":"W2897907254","doi":"10.1007/978-1-4939-8805-1_13","title":"Chromatin Immunoprecipitation (ChIP) Protocols for the Cancer and Developmental Biology Laboratory","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; University of Alberta","funders":"","keywords":"Chromatin immunoprecipitation; Biology; Chromatin; Enhancer; ChIP-sequencing; Promoter; Histone; Transcription factor; ChIP-on-chip; ChIA-PET; Chromatin remodeling; Gene; Immunoprecipitation; Cell biology; Molecular biology; Computational biology; Genetics; Gene expression","score_opus":0.01851578270127611,"score_gpt":0.3943501640434276,"score_spread":0.37583438134215147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897907254","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3531528,0.0012484704,0.6414655,0.00023934498,0.00021892005,0.003430273,0.00007060325,0.000009726514,0.00016438506],"genre_scores_gemma":[0.051044166,0.00015656248,0.9402151,0.0007540729,0.00018460161,0.007445974,0.00010349658,0.000038449747,0.000057587218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99862677,0.00035035695,0.00029025465,0.00042166054,0.00002753506,0.0002834525],"domain_scores_gemma":[0.99936146,0.00010939933,0.00011485222,0.00026955473,0.00011114831,0.000033565848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010107771,0.00017311564,0.00018890458,0.000052714266,0.00012514912,0.000019002226,0.0002842102,0.0002469779,0.000013848449],"category_scores_gemma":[0.000367493,0.00013560717,0.00004648289,0.000112103095,0.00035243813,0.000002092995,0.00019167596,0.000088705834,0.0000016015566],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005487946,0.000018451527,0.0021178517,0.0000151027025,0.00005771431,2.229268e-7,0.00009911692,0.0000067283004,0.9690101,0.0015778954,0.000049918803,0.026992029],"study_design_scores_gemma":[0.0011075087,0.00064018916,0.0026252838,0.000019312745,0.000019953317,0.0000091051215,0.00014605293,0.0013354465,0.93662655,0.006272376,0.05088666,0.00031158072],"about_ca_topic_score_codex":0.000034512064,"about_ca_topic_score_gemma":0.00009976987,"teacher_disagreement_score":0.30210865,"about_ca_system_score_codex":0.000031271797,"about_ca_system_score_gemma":0.00013429413,"threshold_uncertainty_score":0.55299},"labels":[],"label_agreement":null},{"id":"W2897965711","doi":"10.1007/978-1-4939-8736-8_6","title":"Detecting Amino Acid Coevolution with Bayesian Graphical Models","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research; Government of Canada; Ontario Genomics Institute; Genome Canada","keywords":"Graphical model; Phylogenetic tree; Computational biology; Substitution (logic); Computer science; Protein superfamily; Bayesian probability; Amino acid substitution; Coevolution; Bayesian network; Protein sequencing; Artificial intelligence; Coding (social sciences); Biology; Peptide sequence; Evolutionary biology; Genetics; Mutation; Gene; Mathematics","score_opus":0.01870307091279107,"score_gpt":0.3341647214752569,"score_spread":0.31546165056246583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2897965711","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3200967,0.0009769467,0.67767906,0.000059135968,0.00011405651,0.0001314144,0.0000040022383,0.000005510294,0.000933147],"genre_scores_gemma":[0.5812707,0.000052118066,0.41830388,0.00021079055,0.00009270201,0.000028688848,0.00000844005,0.000018875982,0.0000138270725],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981876,0.00052604167,0.00024970423,0.0005668202,0.000058220863,0.00041162808],"domain_scores_gemma":[0.9993177,0.000026997332,0.00008319536,0.0004015081,0.000104131366,0.00006644979],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000639853,0.00021658518,0.00024643107,0.000108445194,0.00010234579,0.000010276501,0.00022064675,0.00027156374,0.0000054928955],"category_scores_gemma":[0.00012583773,0.00018752446,0.00007786371,0.00021310322,0.00040751367,8.3911e-7,0.0001813998,0.0001411197,0.0000016674666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009153451,0.000025852976,0.004231292,0.0000048259476,0.00006301783,0.000004329332,0.000060864895,0.00008813097,0.9846822,0.001509758,0.000007989306,0.009230227],"study_design_scores_gemma":[0.0006960282,0.0013743574,0.0020331845,0.000010819703,0.00002779361,0.000050116287,0.00008306692,0.0017781953,0.9747564,0.016420517,0.0023993046,0.0003702043],"about_ca_topic_score_codex":0.00004080232,"about_ca_topic_score_gemma":0.00013641083,"teacher_disagreement_score":0.26117396,"about_ca_system_score_codex":0.000015931488,"about_ca_system_score_gemma":0.00004355326,"threshold_uncertainty_score":0.7647026},"labels":[],"label_agreement":null},{"id":"W2898076817","doi":"10.1007/978-1-4939-8820-4_4","title":"Differential Scanning Fluorimetry and Hydrogen Deuterium Exchange Mass Spectrometry to Monitor the Conformational Dynamics of NBD1 in Cystic Fibrosis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; Canadian Institutes of Health Research","keywords":"ΔF508; Endoplasmic reticulum; Cystic fibrosis transmembrane conductance regulator; Chemistry; Hydrogen–deuterium exchange; Biophysics; Cystic fibrosis; Folding (DSP implementation); Zebrafish; Transmembrane domain; Intracellular; Mutant; Biochemistry; Mass spectrometry; Cell biology; Membrane; Biology; Chromatography; Genetics","score_opus":0.015315247338786479,"score_gpt":0.38465344804294166,"score_spread":0.3693382007041552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2898076817","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47547963,0.00043226642,0.52335256,0.00023601163,0.00009401244,0.00027824947,0.000023147255,0.0000065009453,0.00009760766],"genre_scores_gemma":[0.41982317,0.000019494,0.5799249,0.00007117467,0.0000689504,0.000043807984,0.000022994373,0.000011454458,0.00001406441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825984,0.00059459923,0.0003665021,0.00025928483,0.00016639996,0.00035335208],"domain_scores_gemma":[0.99895173,0.0005247746,0.00007876824,0.0002697493,0.000082935614,0.00009203456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008746749,0.00014399417,0.0003847816,0.00048821807,0.000037251317,0.0000108498125,0.00017685827,0.000118891694,0.00008939457],"category_scores_gemma":[0.001289292,0.00010860594,0.000050457464,0.0005930419,0.00039595715,0.00003073014,0.00020119848,0.00021768245,0.0000032310525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032584972,0.000030607687,0.01380556,0.00009707879,0.00003823762,0.000009196822,0.00018303095,0.000009495661,0.96861964,0.0005545653,0.0000052046144,0.0163215],"study_design_scores_gemma":[0.0016702331,0.0016923842,0.06093238,0.00019807329,0.000046524958,0.00006439695,0.00030469114,0.017586991,0.9115166,0.0053663175,0.00038296758,0.00023846434],"about_ca_topic_score_codex":0.00008682987,"about_ca_topic_score_gemma":0.000020491168,"teacher_disagreement_score":0.057103094,"about_ca_system_score_codex":0.00012703819,"about_ca_system_score_gemma":0.000039384915,"threshold_uncertainty_score":0.44288218},"labels":[],"label_agreement":null},{"id":"W2900608547","doi":"10.1007/978-1-4939-8944-7_15","title":"Genotyping-by-Sequencing on the Ion Torrent Platform in Barley","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Genome; Reference genome; Biology; Genotyping; Ion semiconductor sequencing; Genetics; Personal genomics; DNA sequencing; Genome project; Cancer genome sequencing; Computational biology; Single-nucleotide polymorphism; SNP array; Whole genome sequencing; Gene; Genotype","score_opus":0.04770238840547023,"score_gpt":0.33674453455882875,"score_spread":0.2890421461533585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900608547","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9885996,0.00044546626,0.0071044657,0.0010954969,0.0003566099,0.00017370461,0.000006989468,0.000012918178,0.0022047306],"genre_scores_gemma":[0.97704494,0.00007927414,0.02054405,0.002000291,0.00021803682,0.00003297466,0.000026815624,0.0000017599176,0.000051828058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847287,0.00061515014,0.00021920943,0.0003081161,0.000051718805,0.00033292614],"domain_scores_gemma":[0.9995109,0.00029565982,0.000046083573,0.00008831368,0.00002397292,0.000035078563],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012489813,0.00012795223,0.0001737046,0.000025145557,0.000083799634,0.0000144336,0.00027023794,0.00019021571,0.00018116429],"category_scores_gemma":[0.00014611684,0.00004396812,0.00005268634,0.00026510397,0.00014460947,0.000010520509,0.00008180259,0.00019543804,0.00001825018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017373455,0.00001947619,0.0016475444,7.183112e-7,0.0000023227121,0.000004492727,0.000062927844,0.0000021717922,0.91498876,0.002580624,0.00004903159,0.08062454],"study_design_scores_gemma":[0.00019827351,0.001186433,0.009372563,0.000024259727,0.000004533483,0.00001071341,0.00017645885,0.00023461641,0.9307226,0.03630512,0.021490289,0.00027415273],"about_ca_topic_score_codex":0.00021839364,"about_ca_topic_score_gemma":0.0005347621,"teacher_disagreement_score":0.08035039,"about_ca_system_score_codex":0.000038959424,"about_ca_system_score_gemma":0.000008434068,"threshold_uncertainty_score":0.19836219},"labels":[],"label_agreement":null},{"id":"W2900708610","doi":"10.1007/978-1-4939-8931-7_6","title":"Assessing Functional Roles of the Senescence-Associated Secretory Phenotype (SASP)","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research; Université de Montréal; Institut Du Cancer de Montréal; Mitacs","keywords":"Senescence; Paracrine signalling; Autocrine signalling; Biology; Cell biology; Proinflammatory cytokine; Phenotype; Secretion; Context (archaeology); Angiogenesis; Cancer cell; Tumor microenvironment; Cell type; Cell; Immune system; Cancer; Immunology; Cancer research; Inflammation; Cell culture; Genetics; Receptor; Endocrinology; Gene","score_opus":0.0448137691120977,"score_gpt":0.39871416302827983,"score_spread":0.3539003939161821,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900708610","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6127356,0.00067670713,0.38347462,0.00038935416,0.00078445725,0.0001997504,0.0000041126837,0.000036722944,0.0016986838],"genre_scores_gemma":[0.80221236,0.00001810212,0.19645484,0.0010046507,0.00013221797,0.000008579597,0.000014948749,0.00002085274,0.0001334225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99757737,0.0012806909,0.00035896566,0.00032701646,0.00015529704,0.00030064373],"domain_scores_gemma":[0.9989251,0.00024366437,0.00017504478,0.00039447309,0.00020427715,0.000057479716],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012356838,0.00015744257,0.0003822477,0.00013809024,0.00008001444,0.000008253349,0.0001770619,0.0002500358,0.0001309462],"category_scores_gemma":[0.001455364,0.00011252828,0.00012634443,0.0005250238,0.0005960629,0.000033959815,0.00010328528,0.00028219103,0.0000054605907],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059344642,0.00008405324,0.07155936,0.00001796329,0.00004775719,0.000008377211,0.00017542187,0.0000029871026,0.90073186,0.0008757912,0.00003386082,0.026403222],"study_design_scores_gemma":[0.0012029181,0.00026424916,0.3945027,0.00018713671,0.00009731289,0.000036108926,0.00037300683,0.0007365809,0.5956167,0.0044094627,0.002325928,0.00024793568],"about_ca_topic_score_codex":0.00006582719,"about_ca_topic_score_gemma":0.000049091697,"teacher_disagreement_score":0.32294333,"about_ca_system_score_codex":0.000075255,"about_ca_system_score_gemma":0.00022225636,"threshold_uncertainty_score":0.45887703},"labels":[],"label_agreement":null},{"id":"W2900730055","doi":"10.1007/978-1-4939-8618-7_10","title":"miRNet—Functional Analysis and Visual Exploration of miRNA–Target Interactions in a Network Context","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":265,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Fonds de recherche du Québec – Nature et technologies; McGill University","keywords":"Context (archaeology); Computer science; microRNA; Biology; Genetics; Paleontology","score_opus":0.029887281864244726,"score_gpt":0.3986795137081915,"score_spread":0.36879223184394677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900730055","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39908102,0.0004955287,0.6000795,0.00004708609,0.00010099791,0.00010688662,0.000004435029,0.0000030805784,0.000081449325],"genre_scores_gemma":[0.790465,0.000032889202,0.20899695,0.00013249848,0.00010087019,0.000036939087,0.00019560909,0.000010840491,0.000028439918],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981953,0.00082395953,0.00036706243,0.00037406394,0.000047518348,0.00019210379],"domain_scores_gemma":[0.99946165,0.00006849696,0.00014001374,0.00018657692,0.000102127626,0.00004114591],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006528078,0.00012990079,0.00025159298,0.00028800304,0.000027968774,0.00000677314,0.00007271261,0.00014123096,0.00006010246],"category_scores_gemma":[0.0002796664,0.0001359147,0.00009496476,0.0005620781,0.00020885606,0.000008055737,0.000094373594,0.00008253846,0.00000140971],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016635461,0.0000669608,0.04786089,0.0000074346817,0.00018658004,0.0000014469015,0.000050046743,0.0005610335,0.9458466,0.0005314031,0.000038510112,0.0046827523],"study_design_scores_gemma":[0.0010824883,0.00041597415,0.08801125,0.000026719148,0.00014338539,0.000008648288,0.00012146654,0.007190466,0.8916449,0.0072536515,0.003788948,0.00031211058],"about_ca_topic_score_codex":0.00007622329,"about_ca_topic_score_gemma":0.0008488664,"teacher_disagreement_score":0.39138395,"about_ca_system_score_codex":0.000022616166,"about_ca_system_score_gemma":0.00004928246,"threshold_uncertainty_score":0.55424404},"labels":[],"label_agreement":null},{"id":"W2900935567","doi":"10.1007/978-1-4939-8885-3_2","title":"An Economical, Quantitative, and Robust Protocol for High-Throughput T Cell Receptor Sequencing from Tumor or Blood","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Rosetrees Trust; National Institute for Health and Care Research; Cancer Research UK; Francis Crick Institute","keywords":"Biology; Complementary DNA; T-cell receptor; Computational biology; Receptor; DNA sequencing; Immune system; DNA; T cell; Gene; Immunology; Genetics","score_opus":0.12476649692176618,"score_gpt":0.48898686531799096,"score_spread":0.3642203683962248,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900935567","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41542757,0.000055564105,0.53090876,0.00023750043,0.00012762676,0.05273102,0.000049393824,0.000050034065,0.00041253568],"genre_scores_gemma":[0.00080586853,0.0000069397947,0.95831823,0.00053980696,0.00019899895,0.03982682,0.00003923915,0.000056666497,0.00020743177],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970966,0.0012595075,0.00041439536,0.00072592555,0.000064202,0.00043937884],"domain_scores_gemma":[0.9983806,0.0007437891,0.00011417487,0.00048539683,0.0001266465,0.00014938551],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015441097,0.00021843026,0.00055944896,0.00017062559,0.00006598734,0.000025551064,0.00019057663,0.00021756665,0.001846358],"category_scores_gemma":[0.0006225268,0.00017387538,0.00006493996,0.00016955787,0.00048199235,0.000045565183,0.00009160788,0.00026620502,0.000008843256],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002168697,0.00016115388,0.00068602315,0.0000771811,0.00006992018,0.00002552494,0.00024886796,0.000005184803,0.9893166,0.00090867135,0.00004788239,0.006284313],"study_design_scores_gemma":[0.0056187594,0.0061079655,0.00009157811,0.000048517268,0.000037900645,0.000018046054,0.0001484519,0.0017329162,0.9695404,0.005673498,0.01076237,0.00021956986],"about_ca_topic_score_codex":0.00031489748,"about_ca_topic_score_gemma":0.000073650466,"teacher_disagreement_score":0.42740947,"about_ca_system_score_codex":0.000111470545,"about_ca_system_score_gemma":0.0002465344,"threshold_uncertainty_score":0.9990661},"labels":[],"label_agreement":null},{"id":"W2900946303","doi":"10.1007/978-1-4939-8931-7_15","title":"Quantification of Aneuploidy in Mammalian Systems","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"KWF Kankerbestrijding","keywords":"Aneuploidy; Biology; Computational biology; Single cell sequencing; DNA sequencing; Massive parallel sequencing; Genome; Chromosome; Karyotype; Genetics; Comparative genomic hybridization; Whole genome sequencing; Isolation (microbiology); Bioinformatics; DNA; Gene; Exome sequencing; Phenotype","score_opus":0.026401139854139947,"score_gpt":0.381641550248235,"score_spread":0.35524041039409504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2900946303","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44743592,0.0014928827,0.549592,0.00005579288,0.0004138457,0.00020122486,0.000015821037,0.000003461045,0.00078906526],"genre_scores_gemma":[0.8483115,0.00014400725,0.15116377,0.00011780062,0.00010133336,0.000036096877,0.00006038863,0.000018093137,0.000047023354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985805,0.00044883284,0.0003676611,0.00034747485,0.00003775223,0.00021775633],"domain_scores_gemma":[0.999315,0.000047623696,0.00011396621,0.0004115798,0.00007827354,0.000033550048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008743232,0.00011435594,0.00021610758,0.00014155783,0.000013600599,0.000006008962,0.00020458928,0.0002233195,0.0000073647407],"category_scores_gemma":[0.00041104166,0.00011946963,0.000047735004,0.00019891516,0.00018258615,0.0000010774428,0.00009151883,0.00007359634,0.0000032742967],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047758564,0.000046080575,0.012662126,0.000017763972,0.00000919157,0.0000031656868,0.000028929708,0.00017197362,0.97875077,0.0050182184,0.000035264304,0.0032087767],"study_design_scores_gemma":[0.00047363775,0.0004264272,0.0041632815,0.000015363266,0.000006699343,0.00000862822,0.00005192798,0.00047202173,0.97989655,0.0012220019,0.013095056,0.00016840946],"about_ca_topic_score_codex":0.0003077501,"about_ca_topic_score_gemma":0.00018072921,"teacher_disagreement_score":0.40087557,"about_ca_system_score_codex":0.00002062986,"about_ca_system_score_gemma":0.000059954822,"threshold_uncertainty_score":0.487183},"labels":[],"label_agreement":null},{"id":"W2901056248","doi":"10.1007/978-1-4939-8944-7_5","title":"Isolated Microspore Culture in Barley","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Université Laval","keywords":"Microspore; Doubled haploidy; Stamen; Biology; Production (economics); Yield (engineering); Agronomy; Botany; Ploidy; Genetics; Physics; Gene; Economics","score_opus":0.012891358057260684,"score_gpt":0.3624026877329537,"score_spread":0.34951132967569304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901056248","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33308545,0.0060398635,0.6577653,0.00026801566,0.00042942422,0.000284219,0.000015531632,0.000018714538,0.0020934404],"genre_scores_gemma":[0.37941554,0.0004426408,0.6149882,0.0017262489,0.00050399976,0.00005232314,0.00076999824,0.00004358883,0.0020574175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984674,0.00049588876,0.00025389277,0.00045390267,0.000034475026,0.0002944348],"domain_scores_gemma":[0.9995363,0.000008417782,0.000057754965,0.00028929758,0.0000634653,0.000044766708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045292138,0.0001730383,0.00020499008,0.0000882002,0.000038163944,0.000010028976,0.00021383663,0.0004987959,0.00002322637],"category_scores_gemma":[0.00016383392,0.00014414718,0.000058701175,0.00022315569,0.00015751676,0.000002317103,0.00008843844,0.00015894219,0.000011725204],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005548648,0.000034080418,0.004956489,0.0000041166873,0.00001638632,0.000018693576,0.0001219628,0.000006183501,0.98905796,0.00028914577,0.00067747914,0.004762005],"study_design_scores_gemma":[0.00047199446,0.00031781377,0.0006325215,0.000011567997,0.0000058419437,0.000046797668,0.000027902359,0.000115368064,0.8826368,0.00055084686,0.114979886,0.00020265533],"about_ca_topic_score_codex":0.00014361425,"about_ca_topic_score_gemma":0.0011143686,"teacher_disagreement_score":0.114302404,"about_ca_system_score_codex":0.000019520949,"about_ca_system_score_gemma":0.00005436623,"threshold_uncertainty_score":0.58781517},"labels":[],"label_agreement":null},{"id":"W2901255629","doi":"10.1007/978-1-4939-8793-1_5","title":"Lysis Buffer Choices Are Key Considerations to Ensure Effective Sample Solubilization for Protein Electrophoresis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"Canadian Institutes of Health Research; Saskatchewan Health Research Foundation","keywords":"Lysis; Lysis buffer; Chemistry; Buffer (optical fiber); Solubilization; Molecular biology; Protein purification; Biochemistry; Cell biology; Biology","score_opus":0.024678531521923074,"score_gpt":0.41397393667267274,"score_spread":0.3892954051507497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901255629","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21307842,0.00030490276,0.7836566,0.00044245514,0.00006678765,0.0022639472,0.000055497367,0.000016944769,0.00011447392],"genre_scores_gemma":[0.28455982,0.00001204931,0.7121914,0.0005409253,0.00020057702,0.0022499987,0.00011258176,0.000044195338,0.0000884607],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99615616,0.0019956483,0.00033402359,0.0008176086,0.00010598598,0.00059055217],"domain_scores_gemma":[0.99843645,0.0002879739,0.00008409427,0.0005745794,0.0004905305,0.00012636051],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0015914553,0.00024304107,0.00034805256,0.0002566759,0.00018411296,0.00003514233,0.00023281893,0.0004130109,0.000054814536],"category_scores_gemma":[0.011310331,0.00023484444,0.0001292529,0.00039632642,0.00019757422,0.000003946987,0.00019658326,0.00015494315,0.00000879506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001766295,0.000061000468,0.0013557343,0.00002661079,0.000082812774,0.000002105113,0.00005499445,0.000040164476,0.9916104,0.0012755862,0.00013449267,0.005179436],"study_design_scores_gemma":[0.00050915394,0.0014160979,0.00083277747,0.000017258924,0.000016586422,0.000004347589,0.000016314209,0.00025042292,0.975875,0.008388961,0.012411929,0.00026115667],"about_ca_topic_score_codex":0.00016192817,"about_ca_topic_score_gemma":0.00079165597,"teacher_disagreement_score":0.07148141,"about_ca_system_score_codex":0.00006896049,"about_ca_system_score_gemma":0.00013799286,"threshold_uncertainty_score":0.9970178},"labels":[],"label_agreement":null},{"id":"W2901616228","doi":"10.1007/978-1-4939-8618-7_13","title":"Toward Large-Scale Computational Prediction of Protein Complexes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Protein–protein interaction; Proteome; Computational biology; Multiprotein complex; Computer science; Variety (cybernetics); Scale (ratio); Proteomics; Biology; Bioinformatics; Artificial intelligence; Biochemistry; Physics","score_opus":0.021106947606287205,"score_gpt":0.3394966391987064,"score_spread":0.31838969159241914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901616228","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0868853,0.00029162242,0.9111333,0.000067106965,0.00014496519,0.00022790805,0.00006242009,0.000007912118,0.0011794405],"genre_scores_gemma":[0.3167681,0.0000073010688,0.68264264,0.00020761437,0.000103045364,0.000021256626,0.00019807884,0.0000115891935,0.000040357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874246,0.0003166255,0.00038369754,0.0002518187,0.000057495734,0.0002479306],"domain_scores_gemma":[0.99946046,0.000017375183,0.00012873982,0.00024348647,0.000108339846,0.00004157241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007998708,0.00012803554,0.00020556354,0.000077643206,0.000036578105,0.0000058109536,0.0001892688,0.00023727326,0.000031420746],"category_scores_gemma":[0.00006971525,0.00012311943,0.00007704038,0.00012833587,0.00024809956,0.0000020720151,0.00015841937,0.000100082565,0.0000037254297],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005994417,0.00006169105,0.0012356756,0.00002237324,0.000039587834,6.9797443e-7,0.00014781735,0.00023472743,0.9863945,0.0053950306,0.000118872515,0.0062890677],"study_design_scores_gemma":[0.0018178271,0.0015114713,0.0025061597,0.000042781383,0.000022536837,0.000028867707,0.00019232526,0.023991717,0.86146814,0.08030142,0.027750716,0.00036602985],"about_ca_topic_score_codex":0.000009206656,"about_ca_topic_score_gemma":0.000011800008,"teacher_disagreement_score":0.22988282,"about_ca_system_score_codex":0.000010469177,"about_ca_system_score_gemma":0.000047396425,"threshold_uncertainty_score":0.5020665},"labels":[],"label_agreement":null},{"id":"W2901784834","doi":"10.1007/978-1-4939-8944-7_7","title":"Virus-Induced Gene Silencing (VIGS) for Functional Characterization of Disease Resistance Genes in Barley Seedlings","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Russian Science Foundation; Science Foundation Ireland","keywords":"Gene silencing; Biology; Gene; Functional genomics; Genetics; Candidate gene; Phenotype; Plant disease resistance; Function (biology); Computational biology; Genome; Genomics","score_opus":0.06170664329223734,"score_gpt":0.3643681599580455,"score_spread":0.30266151666580815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901784834","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96612644,0.00024138724,0.03273118,0.00023634879,0.0001246372,0.00027735828,0.00022478438,0.000012080329,0.000025794167],"genre_scores_gemma":[0.9124965,0.00027373235,0.08579559,0.00037111473,0.0002958767,0.00022331673,0.0004593984,0.000003429051,0.000081058024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99850225,0.00053059607,0.0002725513,0.00032773198,0.00008765842,0.0002792286],"domain_scores_gemma":[0.99929225,0.00039066316,0.00009285689,0.000059730803,0.00011531318,0.00004919168],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009817003,0.000110737965,0.00022526759,0.00005319654,0.000073129115,0.000007846757,0.00016624262,0.000094890405,0.000028622166],"category_scores_gemma":[0.00073152356,0.000053929474,0.000058378526,0.00035712204,0.000118475386,0.000038029182,0.0000919996,0.00007604025,0.0000015951704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025001809,0.000034982586,0.0019925274,0.000011483267,0.000008926878,0.0000022743793,0.00005401056,0.0000014085633,0.98725,0.0002064709,0.000004508908,0.010183428],"study_design_scores_gemma":[0.00015164014,0.00014312055,0.087874584,0.00002218618,0.000004210317,3.153321e-7,0.000028490771,0.00018053179,0.9088373,0.0017287126,0.0009201698,0.000108743574],"about_ca_topic_score_codex":0.000069058384,"about_ca_topic_score_gemma":0.0003672447,"teacher_disagreement_score":0.08588205,"about_ca_system_score_codex":0.000032110114,"about_ca_system_score_gemma":0.000019946061,"threshold_uncertainty_score":0.21991801},"labels":[],"label_agreement":null},{"id":"W2901979548","doi":"10.1007/978-1-4939-8757-3_7","title":"High-Throughput Solid-Phase Microextraction–Liquid Chromatography–Mass Spectrometry for Microbial Untargeted Metabolomics","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; University of Toronto","funders":"","keywords":"Metabolome; Metabolomics; Chromatography; Mass spectrometry; Sample preparation; Chemistry; Solid-phase microextraction; Analyte; Biomarker discovery; Chemometrics; Gas chromatography–mass spectrometry; Proteomics; Biochemistry","score_opus":0.01563487422098674,"score_gpt":0.39032955715718315,"score_spread":0.3746946829361964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2901979548","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28490984,0.0025202115,0.71014863,0.00022039858,0.0012907884,0.0005469188,0.00015659745,0.00003241108,0.00017416838],"genre_scores_gemma":[0.10117845,0.0007382451,0.8955778,0.0008978729,0.00083758397,0.00016346869,0.0004113617,0.00008994536,0.000105297346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961604,0.0007248246,0.00079731987,0.0012362947,0.00009785557,0.0009832914],"domain_scores_gemma":[0.99833924,0.000112641275,0.00033503727,0.00080612354,0.00027170454,0.00013527484],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015685632,0.0005414995,0.00090076186,0.0005548856,0.00021946886,0.00003725145,0.00054123567,0.0005977881,0.00007723758],"category_scores_gemma":[0.0006825185,0.0005389199,0.00044636655,0.0007321883,0.00061307556,0.000008781565,0.00026009243,0.00028661967,0.000009582043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008882853,0.00024816237,0.00013212563,0.00002294805,0.00050652603,0.0000061642213,0.000026577294,0.0000066473845,0.9908503,0.0054752277,0.00059030787,0.0012466728],"study_design_scores_gemma":[0.0029602086,0.0025290158,0.00007591628,0.0000069075268,0.000115610404,0.000031422147,0.000046485467,0.000041346622,0.9196134,0.0050233654,0.06901123,0.0005450605],"about_ca_topic_score_codex":0.000058585483,"about_ca_topic_score_gemma":0.000056450906,"teacher_disagreement_score":0.18542911,"about_ca_system_score_codex":0.000056211382,"about_ca_system_score_gemma":0.000117191004,"threshold_uncertainty_score":0.9997062},"labels":[],"label_agreement":null},{"id":"W2903578356","doi":"10.1007/978-1-4939-8935-5_23","title":"Microtomy: Cutting Formalin-Fixed, Paraffin-Embedded Sections","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; London Health Sciences Centre","funders":"","keywords":"Microtome; H&E stain; Pathology; Staining; Histology; Eosin; Haematoxylin; Biomedical engineering; Medicine","score_opus":0.04380334157936632,"score_gpt":0.48306437075815506,"score_spread":0.43926102917878873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903578356","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000012362456,0.5200589,0.47775528,0.000022583858,0.0002106202,0.0010314093,0.000058650778,0.00005463771,0.00079559913],"genre_scores_gemma":[0.000002074724,0.5367546,0.46026218,0.00026436098,0.00023448262,0.0012262707,0.0009529611,0.000101998565,0.00020107841],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.993672,0.002461104,0.0012553374,0.0016151574,0.00008704911,0.00090932695],"domain_scores_gemma":[0.9973004,0.000113811526,0.0006307367,0.0016579466,0.0001394751,0.0001576343],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017716155,0.00087308907,0.0016407608,0.00044971902,0.00018239813,0.000037446767,0.0011141773,0.0022830192,0.000036422483],"category_scores_gemma":[0.0004247896,0.0008055931,0.0009891728,0.0006822903,0.00048554636,0.000003336439,0.00080039207,0.0007807812,0.000050548784],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030456164,0.00027155856,0.000025936126,0.0018142734,0.0006999382,0.0000414981,0.00002897817,0.00000450689,0.2123963,0.009034723,0.0018837329,0.7737681],"study_design_scores_gemma":[0.00023020105,0.00028421122,4.0870432e-7,0.00050832663,0.00023075295,0.00021560071,0.000006774588,0.000011096384,0.048848044,0.0015652884,0.94731545,0.00078386965],"about_ca_topic_score_codex":0.000026258365,"about_ca_topic_score_gemma":0.00001898612,"teacher_disagreement_score":0.9454317,"about_ca_system_score_codex":0.00008167082,"about_ca_system_score_gemma":0.0003506971,"threshold_uncertainty_score":0.9994395},"labels":[],"label_agreement":null},{"id":"W2903681786","doi":"10.1007/978-1-4939-8994-2_8","title":"Free Dyadic Social Interaction Test in Mice","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroendocrine regulation and behavior","field":"Psychology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Identification (biology); Affect (linguistics); Psychology; Test (biology); Quarter (Canadian coin); Biology; Communication; Ecology","score_opus":0.05737362487188578,"score_gpt":0.49952271502661655,"score_spread":0.44214909015473075,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903681786","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78631926,0.00011474051,0.19484517,0.003367371,0.0025670468,0.00036262782,0.000014126372,0.00008062092,0.012329066],"genre_scores_gemma":[0.76481986,0.000002119327,0.23103201,0.0017112141,0.0004119515,0.00012426495,0.000021244914,0.000047444086,0.0018298988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975894,0.0014070254,0.00030524566,0.0003592761,0.000039878694,0.00029915027],"domain_scores_gemma":[0.99936557,0.0002396192,0.00008115613,0.00025053366,0.0000341011,0.000029031244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041401736,0.00012358332,0.00020784426,0.00030676564,0.00003097536,0.000007186988,0.00022725345,0.00013236313,0.00078677764],"category_scores_gemma":[0.00035884115,0.0001252957,0.00005879236,0.00035067584,0.00017518122,0.000022642493,0.00009034571,0.0002687548,0.00007889086],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005936613,0.00023499405,0.02576465,0.0000029170233,0.000008414979,0.0001030583,0.00039839756,3.051981e-7,0.89371455,0.0064314418,0.0008038137,0.07247807],"study_design_scores_gemma":[0.0057674106,0.0013384864,0.38409135,0.000029060102,0.000056476205,0.0004215542,0.0006674597,0.00019632491,0.4228807,0.026946584,0.15676,0.00084457046],"about_ca_topic_score_codex":0.00016160554,"about_ca_topic_score_gemma":0.00015868171,"teacher_disagreement_score":0.47083384,"about_ca_system_score_codex":0.000049925115,"about_ca_system_score_gemma":0.000013318924,"threshold_uncertainty_score":0.86146635},"labels":[],"label_agreement":null},{"id":"W2903854772","doi":"10.1007/978-1-4939-8910-2_16","title":"CRISPR-Mediated Approaches to Regulate YAP/TAZ Levels","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; National Cancer Institute; Canadian Institutes of Health Research","keywords":"CRISPR; YAP1; Biology; Hippo signaling pathway; Genome editing; Gene; Computational biology; Cas9; Gene knockout; Genetics; Transcription factor","score_opus":0.1210909090919635,"score_gpt":0.39532687337802563,"score_spread":0.2742359642860621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903854772","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35728934,0.00042586128,0.63930017,0.00039221178,0.00034219748,0.00029090286,0.00003089396,0.00003783096,0.0018905705],"genre_scores_gemma":[0.3723692,0.000015981628,0.6246309,0.0017880014,0.0003558987,0.00009214942,0.00013467668,0.000067542314,0.00054561504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962299,0.0014589196,0.00048637966,0.0009922921,0.00011126678,0.00072128075],"domain_scores_gemma":[0.9986351,0.00007852615,0.000112194844,0.0008534843,0.00010676618,0.00021388866],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019371471,0.00035978138,0.00043343822,0.00024017523,0.00009728445,0.000024163206,0.00053921196,0.00059816573,0.000067539375],"category_scores_gemma":[0.0010343945,0.0003423758,0.00015784311,0.0004549268,0.00033848785,0.0000030249955,0.00032988243,0.00023749289,0.00009565164],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090969,0.000060267692,0.00056325324,0.000010372696,0.0000598743,0.000013555741,0.00014461632,0.000046042507,0.98539525,0.00095931045,0.000061604864,0.01259487],"study_design_scores_gemma":[0.0005174662,0.0007627015,0.0004631282,0.00001760253,0.000016727874,0.000023013603,0.000046015964,0.00022961172,0.9495708,0.0025321967,0.045378063,0.00044271283],"about_ca_topic_score_codex":0.000041570234,"about_ca_topic_score_gemma":0.000042170734,"teacher_disagreement_score":0.045316458,"about_ca_system_score_codex":0.00002958121,"about_ca_system_score_gemma":0.00010918766,"threshold_uncertainty_score":0.99990284},"labels":[],"label_agreement":null},{"id":"W2903943851","doi":"10.1007/978-1-4939-8922-5_12","title":"Engineered Thymidine-Active Deoxycytidine Kinase for Bystander Killing of Malignant Cells","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Blood Services","funders":"Canadian Institutes of Health Research","keywords":"Suicide gene; Deoxycytidine kinase; Bystander effect; Thymidine kinase; Cytotoxic T cell; Gene delivery; Cancer cell; Transduction (biophysics); Biology; Transgene; Cancer research; Genetic enhancement; Cell biology; Chemistry; Deoxycytidine; Cancer; Biochemistry; Immunology; Gene; In vitro; Genetics","score_opus":0.03282901962624104,"score_gpt":0.4023880713971003,"score_spread":0.3695590517708593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903943851","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33163765,0.0009886379,0.6665246,0.000055551467,0.00018747103,0.00041512414,0.00005426496,0.000008357992,0.00012838481],"genre_scores_gemma":[0.34660476,0.00028479495,0.65216035,0.00024341406,0.0002279898,0.00015674994,0.00011836928,0.00007461565,0.00012897114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99770993,0.00070156297,0.0003995908,0.0005755763,0.00009056037,0.00052279537],"domain_scores_gemma":[0.99885297,0.00012185667,0.00012220067,0.0005561409,0.00026063988,0.000086197484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013890095,0.0002450494,0.0003818874,0.00019154247,0.000046766465,0.0000064431515,0.00036067292,0.00033091524,0.000039979324],"category_scores_gemma":[0.00036686653,0.00022800453,0.00017393133,0.00025390068,0.00029720078,0.0000024157857,0.00014370307,0.00013087723,0.0000023257887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001854381,0.000086344284,0.000047510264,0.00002926724,0.00011048318,0.0000042348333,0.000053059266,0.00011584833,0.9857555,0.0002866156,0.000046070563,0.011610657],"study_design_scores_gemma":[0.0010785491,0.0046675866,0.00001217111,0.00001678542,0.000016614995,0.000004293116,0.000048984984,0.000663224,0.9867662,0.0013637949,0.005118821,0.00024296349],"about_ca_topic_score_codex":0.000017573053,"about_ca_topic_score_gemma":0.000035373632,"teacher_disagreement_score":0.014967116,"about_ca_system_score_codex":0.000034183533,"about_ca_system_score_gemma":0.00011957117,"threshold_uncertainty_score":0.9297755},"labels":[],"label_agreement":null},{"id":"W2903963813","doi":"10.1007/978-1-4939-8994-2_29","title":"Description of Ovariectomy Protocol in Mice","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Estrogen and related hormone effects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":137,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Menopause; Isoflurane; Estrogen; Surgical Menopause; Medicine; Physiology; Guideline; Protocol (science); Bioinformatics; Gynecology; Endocrinology; Biology; Pathology; Alternative medicine; Anesthesia","score_opus":0.01779242734869368,"score_gpt":0.39158653419379297,"score_spread":0.3737941068450993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2903963813","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46922722,0.0002666006,0.5164639,0.00004190995,0.00017512905,0.0106885,0.0000027226622,0.000011117935,0.0031229083],"genre_scores_gemma":[0.27940118,0.000014781725,0.71209747,0.00020802746,0.00009787388,0.008012585,0.000030478774,0.000033906366,0.000103697865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979797,0.0010212295,0.000331728,0.0003559921,0.000043302272,0.00026805833],"domain_scores_gemma":[0.99951077,0.00002614108,0.00010020471,0.00026473578,0.000061403116,0.000036738566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096999557,0.00014490326,0.00022391576,0.00016038843,0.000017087521,0.000004139406,0.00019024247,0.00041385888,0.000013968317],"category_scores_gemma":[0.00028437897,0.00013154399,0.00007238812,0.00028360033,0.0002463582,0.000002194649,0.00011341573,0.00016550187,0.000004246233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002262553,0.00008198025,0.0060856882,0.000019658934,0.000020781039,0.000007190968,0.000036077105,0.000008804834,0.9871859,0.0005441374,0.000023994402,0.005759561],"study_design_scores_gemma":[0.001068052,0.0008372226,0.0012764557,0.00002156558,0.0000058438864,0.000015230689,0.000012340693,0.00011962973,0.99021953,0.0017569347,0.004525181,0.00014203035],"about_ca_topic_score_codex":0.000062863415,"about_ca_topic_score_gemma":0.000022346137,"teacher_disagreement_score":0.19563356,"about_ca_system_score_codex":0.0000170919,"about_ca_system_score_gemma":0.000058890542,"threshold_uncertainty_score":0.5364208},"labels":[],"label_agreement":null},{"id":"W2904397976","doi":"10.1007/978-1-4939-8955-3_18","title":"Heter-LP: A Heterogeneous Label Propagation Method for Drug Repositioning","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Computer science; Task (project management); Drug; Heterogeneous network; Machine learning; Data mining; Drug target; Artificial intelligence; Engineering; Medicine; Pharmacology","score_opus":0.028807137691460188,"score_gpt":0.4295152393717107,"score_spread":0.4007081016802505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904397976","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004884767,0.0001762485,0.9925172,0.0006750809,0.00068581634,0.0005598252,0.000004587681,0.00011495967,0.00038153323],"genre_scores_gemma":[0.004947518,0.0000018783101,0.9933764,0.0012612019,0.000109902816,0.00022200949,0.000015210214,0.000023102513,0.000042799435],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99422497,0.0038674532,0.0005086726,0.0008434613,0.00012759343,0.00042786103],"domain_scores_gemma":[0.9975661,0.00131141,0.00020518563,0.0006087029,0.00023848501,0.000070125396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045218053,0.00021583227,0.000334355,0.00030409195,0.00014405404,0.00009105689,0.00071484025,0.00013402829,0.000005443501],"category_scores_gemma":[0.0009516248,0.00021462343,0.00012534132,0.00060128904,0.00011944018,0.00014721452,0.00036558602,0.00015798173,0.000006396885],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040735325,0.00009541258,0.00006679071,0.000025903933,0.000047445992,0.000021707106,0.00052195,0.004395761,0.52878815,0.12703484,0.00002746504,0.33893383],"study_design_scores_gemma":[0.00039794677,0.00021517019,0.000035235582,0.000015265949,0.000007830232,0.000078449324,0.0000046920018,0.48235604,0.3540686,0.1613615,0.0012626693,0.00019659549],"about_ca_topic_score_codex":0.000039849467,"about_ca_topic_score_gemma":0.0000118300495,"teacher_disagreement_score":0.4779603,"about_ca_system_score_codex":0.00010337695,"about_ca_system_score_gemma":0.0001046898,"threshold_uncertainty_score":0.875209},"labels":[],"label_agreement":null},{"id":"W2904789704","doi":"10.1007/978-1-4939-8935-5_21","title":"Laboratory Safety: Chemical and Physical Hazards","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Chemical Safety and Risk Management","field":"Chemical Engineering","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre","funders":"","keywords":"Physical hazard; Biological hazard; Risk analysis (engineering); Work (physics); Environmental science; Engineering; Business; Occupational safety and health; Environmental health; Medicine; Mechanical engineering","score_opus":0.021782038841113696,"score_gpt":0.39877571975306153,"score_spread":0.37699368091194785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904789704","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007124383,0.8121539,0.18643004,0.00002857285,0.00016014911,0.00028245128,0.000037152866,0.00007323446,0.0008274325],"genre_scores_gemma":[6.5934023e-7,0.7880418,0.2113272,0.00007693095,0.00027344684,0.0000771607,0.00008195076,0.00006625824,0.00005464706],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99730563,0.0006718292,0.0006107339,0.0008207296,0.00009659579,0.0004944974],"domain_scores_gemma":[0.9985916,0.00057202205,0.000146,0.00052424247,0.000030834173,0.00013530074],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008083799,0.0005175343,0.001826736,0.00013653,0.000025401028,0.000011414137,0.00043416233,0.0008121938,0.000041728723],"category_scores_gemma":[0.00062808394,0.00041561405,0.00034717936,0.00045550283,0.00031393193,0.000016972255,0.00063349033,0.00088335236,0.000033874603],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011039758,0.00006441094,4.2391153e-7,0.0038189192,0.00018127607,0.00003039492,0.000023269598,0.0000010761358,0.024139762,0.005643877,0.000060348448,0.9660252],"study_design_scores_gemma":[0.00021203885,0.000026631526,7.509334e-8,0.0011388299,0.00025596828,0.000009027644,0.0000025327802,0.00036023458,0.0077597424,0.0018100704,0.98793536,0.00048946956],"about_ca_topic_score_codex":0.000007185118,"about_ca_topic_score_gemma":3.383514e-7,"teacher_disagreement_score":0.98787504,"about_ca_system_score_codex":0.00016409214,"about_ca_system_score_gemma":0.00005731959,"threshold_uncertainty_score":0.9998296},"labels":[],"label_agreement":null},{"id":"W2904858067","doi":"10.1007/978-1-4939-8994-2_28","title":"OVA-Induced Allergic Airway Inflammation Mouse Model","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":101,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Ovalbumin; Medicine; Asthma; Immunology; Inflammation; Airway hyperresponsiveness; Airway; Sensitization; Mucus; Allergy; Allergic inflammation; Eosinophilic; Pathology; Biology; Anesthesia; Immune system","score_opus":0.03451117818508783,"score_gpt":0.403203638191383,"score_spread":0.3686924600062952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904858067","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4947936,0.00011861201,0.5030676,0.00024510804,0.00009847155,0.00017770551,0.0000017301633,0.000039620038,0.001457528],"genre_scores_gemma":[0.27557543,0.000016098018,0.72165126,0.0018765804,0.000224439,0.000051465697,0.000021863567,0.000034076806,0.0005487753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985511,0.00054665323,0.00027385887,0.00030061195,0.00007426777,0.0002535215],"domain_scores_gemma":[0.9993461,0.000045099165,0.000066954475,0.00034692648,0.00009147994,0.000103448954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005411325,0.00014322193,0.00027607768,0.0001865478,0.00004005976,0.0000046469654,0.000101031925,0.00023100761,0.00007237467],"category_scores_gemma":[0.00039280258,0.00011607105,0.000091946014,0.00017136957,0.00014930303,0.000030100971,0.00006404966,0.00015843,0.000030201865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009144246,0.00004356467,0.000458391,0.000014040046,0.000020297537,0.00001907171,0.00007562993,0.000069278256,0.9490053,0.0015593185,0.000027520262,0.048616145],"study_design_scores_gemma":[0.0009985104,0.00050444034,0.0003815741,0.000019200319,0.00002913831,0.000009826153,0.000039856706,0.014257779,0.97659785,0.0027589628,0.00423585,0.00016703206],"about_ca_topic_score_codex":0.0000072109383,"about_ca_topic_score_gemma":0.0000037984378,"teacher_disagreement_score":0.21921816,"about_ca_system_score_codex":0.000039598734,"about_ca_system_score_gemma":0.00010936343,"threshold_uncertainty_score":0.47332403},"labels":[],"label_agreement":null},{"id":"W2904954576","doi":"10.1007/978-1-4939-8861-7_19","title":"Rapid Imaging of BCL-2 Family Interactions in Live Cells Using FLIM-FRET","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; Institut National d'Optique; McMaster University; Sunnybrook Hospital; University of Toronto","funders":"","keywords":"Förster resonance energy transfer; Fluorescence-lifetime imaging microscopy; Live cell imaging; Fluorescence; Biophysics; Fluorescent protein; Green fluorescent protein; Chemistry; Cell biology; Biology; Cell; Physics; Gene; Optics; Biochemistry","score_opus":0.027311036950692195,"score_gpt":0.4313164246609325,"score_spread":0.4040053877102403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2904954576","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20013657,0.0014206814,0.7976192,0.000023039012,0.00024065375,0.00020474265,0.000011111426,0.000013385943,0.00033058386],"genre_scores_gemma":[0.13406403,0.00015238672,0.8653661,0.00027077025,0.00005807122,0.000020926936,0.000020280231,0.000029861048,0.000017566384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99787724,0.00075522775,0.00044790166,0.00050779997,0.00004648444,0.00036532708],"domain_scores_gemma":[0.9991559,0.00004964676,0.00016222472,0.00048112898,0.00011161829,0.000039481583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007174843,0.00020481776,0.0003092974,0.00025838902,0.000033953493,0.0000066352254,0.00032089782,0.0001611678,0.000021439664],"category_scores_gemma":[0.00022066403,0.00021635048,0.00009240473,0.00027078658,0.00051144656,0.0000064385495,0.00026353332,0.00021667682,0.0000025615373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054589273,0.000053473137,0.0035898073,0.000009536599,0.00001311138,0.000007785058,0.000085051535,0.000020229836,0.9845772,0.000086112836,0.00003171699,0.011471412],"study_design_scores_gemma":[0.00027628947,0.0001666696,0.00024889232,0.00004852003,0.000008121399,0.000013233275,0.00014134929,0.0006899284,0.99391186,0.0016174769,0.0026724464,0.00020521501],"about_ca_topic_score_codex":0.00014094742,"about_ca_topic_score_gemma":0.00004659214,"teacher_disagreement_score":0.06774687,"about_ca_system_score_codex":0.000051055416,"about_ca_system_score_gemma":0.000065685825,"threshold_uncertainty_score":0.8822517},"labels":[],"label_agreement":null},{"id":"W2905385734","doi":"10.1007/978-1-4939-8958-4_4","title":"Monoclonal Antibodies for the Treatment of Melanoma: Present and Future Strategies","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":67,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Quest University Canada; University of British Columbia","funders":"","keywords":"Ipilimumab; Nivolumab; Monoclonal antibody; Pembrolizumab; Medicine; Melanoma; Antibody; Adverse effect; Immunotherapy; TIGIT; Immunology; Monoclonal; Oncology; Immune system; Internal medicine; Cancer research","score_opus":0.1160249317433525,"score_gpt":0.5236938188093235,"score_spread":0.40766888706597104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905385734","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000040744897,0.96855253,0.028298471,0.00022769645,0.00022225358,0.0022460658,0.000047290825,0.000008057514,0.00035688467],"genre_scores_gemma":[1.9348956e-7,0.8040353,0.19451258,0.000010962646,0.0006240241,0.00037909308,0.000060199898,0.000031344207,0.00034631594],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99755496,0.0011854357,0.00044560852,0.00042593203,0.00008598671,0.00030209104],"domain_scores_gemma":[0.9979159,0.0012650791,0.00015933941,0.00052746607,0.000084045256,0.00004814518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000932192,0.00031976277,0.001654691,0.00020393208,0.00003774098,0.000011893894,0.00017528128,0.00042560083,0.00010175626],"category_scores_gemma":[0.000056089608,0.00016565232,0.00045411,0.00016778837,0.00055117905,0.000007803137,0.00006527281,0.00018321743,7.573992e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010924149,0.00010294405,0.00001315277,0.002744962,0.0008194027,0.000016760263,0.00014550034,1.03931896e-7,0.0022629988,0.0009988856,0.00003405489,0.992752],"study_design_scores_gemma":[0.000631251,0.0019880827,0.0000119168135,0.00034497227,0.00063134276,0.00007581426,0.00009049881,0.000017947155,0.0013395468,0.0013305257,0.99341327,0.00012480334],"about_ca_topic_score_codex":0.00004714926,"about_ca_topic_score_gemma":0.0000060124157,"teacher_disagreement_score":0.99337924,"about_ca_system_score_codex":0.00007720322,"about_ca_system_score_gemma":0.00026669845,"threshold_uncertainty_score":0.6755105},"labels":[],"label_agreement":null},{"id":"W2905733033","doi":"10.1007/978-1-4939-8940-9_18","title":"Quantitating Phage Efficacy in Ready-To-Eat Meats","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Parmalat (Canada); Agriculture and Agri-Food Canada","funders":"","keywords":"Listeria monocytogenes; Bacteriophage; Listeria; Food science; Human decontamination; Protocol (science); Biology; Biotechnology; Microbiology; Bacteria; Medicine; Escherichia coli; Genetics","score_opus":0.03491622914026249,"score_gpt":0.4386084171305935,"score_spread":0.403692187990331,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905733033","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6735944,0.000033532393,0.31896406,0.00019522329,0.0003031174,0.00017840709,0.000005350472,0.000017198356,0.0067087044],"genre_scores_gemma":[0.30364266,0.0000040525642,0.6953741,0.00077092176,0.000020633555,0.000016093936,0.0000055893015,0.000012662296,0.00015330465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984739,0.0006026714,0.0002355009,0.0003509835,0.000032123735,0.00030482246],"domain_scores_gemma":[0.9995525,0.0001316852,0.000042272583,0.00022487267,0.000006231537,0.000042477914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006733772,0.00011161856,0.00016938032,0.00009635946,0.000041088388,0.000011825838,0.0002001534,0.00009753148,0.00085562817],"category_scores_gemma":[0.00033842528,0.00010584141,0.000037021644,0.00035437028,0.00015340345,0.000041465933,0.00021129484,0.00015768244,0.00044091893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001239256,0.00006280209,0.0017498913,0.0000013061182,0.0000030855806,0.000015623302,0.00037230353,0.000033560646,0.9570718,0.00019888835,0.000027950155,0.040450428],"study_design_scores_gemma":[0.0004915194,0.00032113382,0.06465111,0.000036022677,0.0000073211227,0.000023313234,0.00008951435,0.00028466905,0.89952874,0.0007851595,0.033490516,0.00029098376],"about_ca_topic_score_codex":0.0008153927,"about_ca_topic_score_gemma":0.0007605127,"teacher_disagreement_score":0.37641,"about_ca_system_score_codex":0.000090388574,"about_ca_system_score_gemma":0.0000046079967,"threshold_uncertainty_score":0.9368529},"labels":[],"label_agreement":null},{"id":"W2905770533","doi":"10.1007/978-1-4939-8940-9_8","title":"Immobilization of Intact Phage and Phage-Derived Proteins for Detection and Biocontrol Purposes","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Alberta; University of Guelph; Alberta Glycomics Centre; Agriculture and Agri-Food Canada","funders":"National Institutes of Health; Public Health Agency; McMaster University","keywords":"Phage display; Bacteriophage; Phagemid; Biology; Computational biology; Microbiology; Chemistry; Gene; Genetics; Antibody; Escherichia coli","score_opus":0.011960767204448637,"score_gpt":0.3497462887793189,"score_spread":0.33778552157487024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2905770533","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4457277,0.000053059284,0.5537162,0.00002362712,0.00005923906,0.00035573068,0.0000045821353,0.000005296191,0.000054600434],"genre_scores_gemma":[0.68363076,0.000017307226,0.3161834,0.00006368458,0.000012935586,0.000066909524,0.0000025191173,0.000006446491,0.000016087139],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992468,0.0002382365,0.00016028874,0.00021984415,0.000015570524,0.00011927084],"domain_scores_gemma":[0.9997295,0.00006503558,0.0000772937,0.00009313895,0.000011633338,0.000023393042],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032739268,0.00007884892,0.00013746541,0.000048709546,0.000049032555,0.000008437106,0.000048768536,0.00008437167,0.00008191582],"category_scores_gemma":[0.00015197985,0.000070669834,0.000025435793,0.000089509784,0.00027403672,0.000053493783,0.00006980908,0.0000481025,0.000001384959],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040809133,0.000019298825,0.0002829892,0.0000076141755,0.0000075529506,3.2183277e-7,0.000099314355,0.0000017426348,0.9187189,0.00003829745,8.796339e-7,0.080782294],"study_design_scores_gemma":[0.00038860567,0.0004192625,0.0066297916,0.0000061225624,0.000012263033,0.000009664671,0.000024331046,0.0007242427,0.9896831,0.0009152694,0.0011185715,0.0000687603],"about_ca_topic_score_codex":0.00027375188,"about_ca_topic_score_gemma":0.00020276426,"teacher_disagreement_score":0.23790304,"about_ca_system_score_codex":0.000029837058,"about_ca_system_score_gemma":0.0000035550383,"threshold_uncertainty_score":0.2881832},"labels":[],"label_agreement":null},{"id":"W2906559645","doi":"10.1007/978-1-4939-8940-9_13","title":"Use of Greater Wax Moth Larvae (Galleria mellonella) as an Alternative Animal Infection Model for Analysis of Bacterial Pathogenesis","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect symbiosis and bacterial influences","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Alberta","funders":"University of Alberta","keywords":"Galleria mellonella; Biology; Innate immune system; Microbiology; Pathogenesis; Insect; Larva; Disease; Animal model; Immune system; Immunology; Ecology; Medicine; Virulence; Pathology","score_opus":0.0920670582428258,"score_gpt":0.3775765100378399,"score_spread":0.2855094517950141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906559645","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97781104,0.000009231013,0.021559743,0.000027824297,0.00016303951,0.00021414844,0.00018393523,0.000010663557,0.000020350415],"genre_scores_gemma":[0.89058506,0.000020154566,0.109053716,0.000080798345,0.00010887055,0.000025101577,0.00011687777,0.0000019170732,0.0000075217968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802285,0.00084848516,0.00043797892,0.00039001467,0.00006808807,0.0002325621],"domain_scores_gemma":[0.9991941,0.00016905426,0.00026197906,0.00010001652,0.00023092808,0.0000439221],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080401247,0.00016259395,0.00051192974,0.00009697573,0.000054386273,0.000022027565,0.00018369003,0.00022082635,0.00026681816],"category_scores_gemma":[0.00019405043,0.000074574295,0.00023145664,0.0004671784,0.00021568815,0.00009263071,0.000071423885,0.00003610187,6.0766735e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041395123,0.00008650774,0.009580732,0.000003946042,0.00019181112,5.3768287e-7,0.00019900397,0.00011625095,0.98371226,0.000707048,9.4792273e-7,0.0049869944],"study_design_scores_gemma":[0.00014758145,0.0017504733,0.03900846,0.000006622028,0.00018183303,8.1386395e-7,0.000023338673,0.01919439,0.93746656,0.0019587707,0.00009282301,0.00016834582],"about_ca_topic_score_codex":0.002315274,"about_ca_topic_score_gemma":0.00093780854,"teacher_disagreement_score":0.08749397,"about_ca_system_score_codex":0.000015265998,"about_ca_system_score_gemma":0.000010948794,"threshold_uncertainty_score":0.35000172},"labels":[],"label_agreement":null},{"id":"W2906648455","doi":"10.1007/978-1-4939-8940-9_16","title":"Duckweed (Lemna minor) and Alfalfa (Medicago sativa) as Bacterial Infection Model Systems","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Medicago sativa; Virulence; Innate immune system; Pathogenesis; Lemna minor; Animal model; Host (biology); Microbiology; Immune system; Botany; Ecology; Gene; Immunology; Genetics; Aquatic plant","score_opus":0.03009819946730697,"score_gpt":0.3432934218661151,"score_spread":0.31319522239880815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906648455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97191435,0.000120587916,0.02555979,0.00033258437,0.000669271,0.00016249676,0.000023366696,0.00003007171,0.0011874794],"genre_scores_gemma":[0.9584664,0.00011274876,0.040342648,0.00031508674,0.00032484843,0.00003637398,0.00011929923,0.0000024121007,0.00028016814],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99819916,0.0009789945,0.00024706463,0.00028642273,0.00004469721,0.0002436578],"domain_scores_gemma":[0.99949694,0.00021679519,0.000090638285,0.00007765144,0.000057006626,0.000060974184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072003435,0.00013713546,0.00022660964,0.00003837936,0.0001277728,0.000038803057,0.00013068145,0.00021831802,0.00013807137],"category_scores_gemma":[0.0003041759,0.00006139961,0.00004645646,0.00017890606,0.00018959801,0.000054595148,0.000113493246,0.00014643188,0.000016839216],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003692978,0.000035754154,0.0012106989,0.0000030697208,0.000013640066,0.0000023080481,0.000043761855,0.0000028339507,0.97233665,0.00044989304,0.00010192993,0.025762541],"study_design_scores_gemma":[0.0010558281,0.0024439357,0.043015074,0.00012963475,0.0000645015,0.0004831046,0.0003279099,0.011159937,0.7235518,0.011876956,0.20486662,0.0010247087],"about_ca_topic_score_codex":0.003953149,"about_ca_topic_score_gemma":0.00054903515,"teacher_disagreement_score":0.24878484,"about_ca_system_score_codex":0.0000274479,"about_ca_system_score_gemma":0.000011939417,"threshold_uncertainty_score":0.5976005},"labels":[],"label_agreement":null},{"id":"W2906716563","doi":"10.1007/978-1-4939-8976-8_32","title":"Mice with Chimeric Human Livers and Their Applications","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"In vivo; Human liver; Hepatitis C virus; Virology; Viral life cycle; Biology; Humanized mouse; Medicine; Immunology; Computational biology; Cancer research; Virus; In vitro; Viral replication; Genetics","score_opus":0.10418894800111804,"score_gpt":0.5282698584359302,"score_spread":0.42408091043481216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906716563","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000056212807,0.74945146,0.2459635,0.000018411234,0.000016925092,0.0012530995,0.000015296893,0.000020847425,0.0032548609],"genre_scores_gemma":[8.6226436e-7,0.6673669,0.331785,0.00007747054,0.000053333777,0.00048505148,0.00009228108,0.000043834574,0.00009526489],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967965,0.001838484,0.00035110745,0.0006070174,0.00006607422,0.0003408027],"domain_scores_gemma":[0.99879825,0.00030544278,0.00013406316,0.00057329144,0.00006609467,0.00012286028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009850967,0.0003081408,0.0013594516,0.00042671172,0.000058077516,0.000009478539,0.00023119722,0.0004171931,0.00005404209],"category_scores_gemma":[0.00016026454,0.0002017207,0.0001333633,0.00057202304,0.0005657981,0.000008798146,0.00016572238,0.00059070904,0.000026945176],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000048127686,0.000034527402,0.00004806899,0.002093836,0.00017988318,0.00002504207,0.000037453163,9.471096e-9,0.0010731808,0.00027222774,0.00001553355,0.9962154],"study_design_scores_gemma":[0.00023062015,0.00039121776,0.000003969225,0.0011820134,0.00018856996,0.000075940916,0.000009020431,0.0000037308944,0.0001627686,0.00025179327,0.99730575,0.00019458235],"about_ca_topic_score_codex":0.000081104896,"about_ca_topic_score_gemma":0.000017687516,"teacher_disagreement_score":0.99729025,"about_ca_system_score_codex":0.000086327884,"about_ca_system_score_gemma":0.00021257365,"threshold_uncertainty_score":0.82259315},"labels":[],"label_agreement":null},{"id":"W2906863358","doi":"10.1007/978-1-4939-9036-8_3","title":"A Laboratory Model to Study T-Cell Motility","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Cell biology; Motility; Biology; Signal transduction; Integrin; T-cell receptor; T cell; Immune system; Cell migration; Immunology; Immunological synapse; Receptor; Cell; Genetics","score_opus":0.04637212478106186,"score_gpt":0.466315529519689,"score_spread":0.4199434047386272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2906863358","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6401067,0.00013574585,0.35591513,0.00018500813,0.000063630956,0.0011794212,0.0000038100513,0.0000309818,0.0023795718],"genre_scores_gemma":[0.3930527,0.000004379612,0.6051147,0.0010935493,0.000010051875,0.000076463155,0.0000049300356,0.000029226245,0.0006139868],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965231,0.0017647443,0.00035283613,0.000697211,0.00020907795,0.00045303704],"domain_scores_gemma":[0.99845743,0.00017684906,0.000040212963,0.0009576547,0.0001516741,0.00021616438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025144052,0.00018920818,0.00049516023,0.00038342463,0.000019758778,0.000007762876,0.00026264138,0.00018819934,0.00025506126],"category_scores_gemma":[0.0006920527,0.00016920251,0.00008668185,0.0007373031,0.000056851743,0.000012914037,0.00033824932,0.00045981485,0.00021117092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014600997,0.00066247943,0.070643105,0.000041497227,0.000022034134,0.00011759513,0.00020310651,0.00025639636,0.92406565,0.0001094044,0.000021474842,0.0037112297],"study_design_scores_gemma":[0.004246466,0.0026971938,0.021411698,0.000025231098,0.000044494594,0.000010896049,0.00040874665,0.01620152,0.9512597,0.0019256992,0.0014240707,0.00034428365],"about_ca_topic_score_codex":0.000032196953,"about_ca_topic_score_gemma":0.000003773709,"teacher_disagreement_score":0.24919958,"about_ca_system_score_codex":0.00010459726,"about_ca_system_score_gemma":0.00017418661,"threshold_uncertainty_score":0.68998784},"labels":[],"label_agreement":null},{"id":"W2907286223","doi":"10.1007/978-1-4939-8976-8_17","title":"Investigating Hepatitis C Virus Infection Using Super-Resolution Microscopy","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Wellcome Trust","keywords":"Resolution (logic); Microscopy; Hepatitis C virus; Immunostaining; Virology; Virus; Protocol (science); High resolution; Nanoscopic scale; Hepatitis a virus; Biology; Materials science; Computer science; Optics; Nanotechnology; Physics; Medicine; Pathology; Artificial intelligence; Immunology; Geology; Immunohistochemistry","score_opus":0.025787334182253537,"score_gpt":0.4288399829644186,"score_spread":0.40305264878216507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907286223","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40925118,0.00028017114,0.5899809,0.000015082719,0.00019421987,0.00015984107,0.000006957074,0.00003170941,0.00007994018],"genre_scores_gemma":[0.029512536,0.00023770837,0.9693996,0.000508875,0.00017674835,0.000037984162,0.000065109474,0.00004357952,0.000017890547],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99764794,0.0008623315,0.00036736444,0.0006143159,0.000057824065,0.00045021783],"domain_scores_gemma":[0.9992105,0.000023484048,0.00013034743,0.00044079122,0.00012704385,0.00006787751],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00077127456,0.0002418316,0.00024207508,0.00016699162,0.00012610457,0.000018563122,0.00020473526,0.00043145136,0.000016136837],"category_scores_gemma":[0.0007024982,0.0002641216,0.00008278358,0.00031105193,0.0006258051,0.000008041869,0.00024251398,0.00020957195,0.000004822293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015631038,0.000025609936,0.048962068,0.000008197432,0.0000128627735,0.0000020317045,0.000032084234,0.000035382593,0.9460876,0.00016044221,0.000029804653,0.004628283],"study_design_scores_gemma":[0.00020934957,0.00040107782,0.0011282371,0.000032252843,0.000010062431,0.000026736423,0.000004621898,0.0010968749,0.9911869,0.0026970017,0.0029308368,0.00027600635],"about_ca_topic_score_codex":0.0016084302,"about_ca_topic_score_gemma":0.0005029892,"teacher_disagreement_score":0.37973866,"about_ca_system_score_codex":0.00008558566,"about_ca_system_score_gemma":0.00007906923,"threshold_uncertainty_score":0.9999811},"labels":[],"label_agreement":null},{"id":"W2907953302","doi":"10.1007/978-1-4939-9036-8_17","title":"Modified Intravital Microscopy to Assess Vascular Health and T-Cell Motility","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Atherosclerosis and Cardiovascular Diseases","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Paul's Hospital; University of British Columbia; University of Northern British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Microcirculation; Intravital microscopy; Immune system; Motility; Pathology; Lymph node; Medicine; Biomedical engineering; Biology; Cell biology; Immunology; Radiology","score_opus":0.026027316221616578,"score_gpt":0.36500633071362837,"score_spread":0.3389790144920118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907953302","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58658296,0.0154899815,0.39663592,0.00007587887,0.00040776824,0.0005255887,0.000032313506,0.00003662181,0.00021295265],"genre_scores_gemma":[0.8058039,0.00045161252,0.19063665,0.002588714,0.000019119316,0.00009926815,0.00014993815,0.000052040457,0.00019873961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9953225,0.0028602357,0.00038493457,0.00076495414,0.00003616653,0.0006311687],"domain_scores_gemma":[0.99895734,0.00014290742,0.00008624972,0.0006699235,0.00004250925,0.000101088415],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019701992,0.00026685483,0.00071872247,0.00015304457,0.000075033444,0.00001753524,0.00027710863,0.00034215383,0.000094718744],"category_scores_gemma":[0.00015895371,0.0002469174,0.00024319782,0.0002201501,0.00014885345,0.000029404082,0.00027401675,0.00031571958,0.0000869251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047771046,0.0001597516,0.02015882,0.000057250345,0.00013281198,0.0000021648434,0.00021072302,0.000035339475,0.9675663,0.0012324036,0.000037701444,0.01035898],"study_design_scores_gemma":[0.008562758,0.0018266495,0.06898556,0.00015633869,0.0001326295,0.000046222907,0.0014098318,0.00006918306,0.87508494,0.004038037,0.038429473,0.0012583735],"about_ca_topic_score_codex":0.00009519924,"about_ca_topic_score_gemma":0.0000049405194,"teacher_disagreement_score":0.21922094,"about_ca_system_score_codex":0.00005905371,"about_ca_system_score_gemma":0.000098251236,"threshold_uncertainty_score":0.99999833},"labels":[],"label_agreement":null},{"id":"W2907976376","doi":"10.1007/978-1-4939-8991-1_21","title":"Gene Replacement by Intron Targeting with CRISPR-Cas9","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"","keywords":"CRISPR; Genome editing; Cas9; Gene; Intron; Biology; Genetics; Computational biology; Homology directed repair; Genome; Gene knockout; DNA; Gene targeting; Homology (biology); Homologous recombination; DNA repair; Nucleotide excision repair","score_opus":0.00591489628406061,"score_gpt":0.3773505685823677,"score_spread":0.3714356722983071,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2907976376","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27946272,0.0023998104,0.71710765,0.00007758111,0.00017008689,0.00023842324,0.000006006479,0.00001318436,0.00052451575],"genre_scores_gemma":[0.2485985,0.00013541234,0.75005203,0.00043643956,0.000072688235,0.000057352983,0.00020098715,0.00005120593,0.00039537845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982838,0.00033952235,0.00027975067,0.0006033727,0.00007251627,0.0004210493],"domain_scores_gemma":[0.999316,0.00002776514,0.00006989415,0.0004784399,0.000040709554,0.000067229725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007538623,0.00022895486,0.00025923934,0.00007260024,0.00002430692,0.000011268931,0.0002167839,0.00022095052,0.000056943416],"category_scores_gemma":[0.00010875185,0.00020471335,0.00006437706,0.00013266123,0.0000539286,0.0000017611286,0.00015182137,0.00017018671,0.000009500072],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097217446,0.000029794259,0.0058043725,0.000016205815,0.000047265527,0.0000042286706,0.00002259336,0.00085840677,0.9895363,0.000076908145,0.00032003582,0.0031866773],"study_design_scores_gemma":[0.00077012856,0.0006396492,0.00013369623,0.0000085276315,0.000011495336,0.000016930095,0.00004987076,0.00030679966,0.9615344,0.00009083547,0.036155768,0.0002819059],"about_ca_topic_score_codex":0.000024825475,"about_ca_topic_score_gemma":0.0000045809365,"teacher_disagreement_score":0.035835735,"about_ca_system_score_codex":0.000024086356,"about_ca_system_score_gemma":0.000031852207,"threshold_uncertainty_score":0.8347968},"labels":[],"label_agreement":null},{"id":"W2908238701","doi":"10.1007/978-1-4939-8991-1_24","title":"Biolistic Delivery of CRISPR/Cas9 with Ribonucleoprotein Complex in Wheat","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"","keywords":"CRISPR; Ribonucleoprotein; Cas9; Genome editing; Subgenomic mRNA; Biology; Genome; Computational biology; Genome engineering; DNA; Genetics; Gene; RNA","score_opus":0.014951989416616086,"score_gpt":0.3974300456125697,"score_spread":0.38247805619595365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908238701","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5797276,0.0008863902,0.41849235,0.000032647647,0.000069313006,0.0002602303,0.000007864134,0.000005724191,0.0005178874],"genre_scores_gemma":[0.68941855,0.000055566088,0.31027982,0.0001017782,0.000017822467,0.000022401284,0.000041682837,0.000023897948,0.00003847532],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845695,0.0003567478,0.00033575812,0.00045004633,0.00006189264,0.00033860045],"domain_scores_gemma":[0.99932486,0.000042953354,0.000069036636,0.0004655176,0.000050503662,0.000047147856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051968655,0.00020284066,0.00036487106,0.00018217933,0.000009957522,0.000004786022,0.00023248863,0.00022950552,0.000041267274],"category_scores_gemma":[0.000090166075,0.00018504103,0.0000709851,0.00023861634,0.00010731288,0.0000017656185,0.00013472585,0.00015159235,0.0000041807048],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010990454,0.000046296413,0.018415816,0.00005075806,0.000025821748,0.000010226276,0.000025496662,0.0019386683,0.97513944,0.00033985346,0.000007701141,0.0038900482],"study_design_scores_gemma":[0.0011589393,0.0006202069,0.010205595,0.000043338896,0.00001103831,0.00002076739,0.00006419473,0.0009216268,0.9836817,0.00035816574,0.0026251425,0.0002893115],"about_ca_topic_score_codex":0.00016168336,"about_ca_topic_score_gemma":0.00010104192,"teacher_disagreement_score":0.10969098,"about_ca_system_score_codex":0.000017533926,"about_ca_system_score_gemma":0.00004966447,"threshold_uncertainty_score":0.75457543},"labels":[],"label_agreement":null},{"id":"W2908252111","doi":"10.1007/978-1-4939-9036-8_1","title":"An Introduction to LFA-1/ICAM-1 Interactions in T-Cell Motility","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Lee Kong Chian School of Medicine, Nanyang Technological University; Ministry of Education, India; Ministry of Earth Sciences; Nanyang Technological University","keywords":"ICAM-1; Motility; Cell biology; Biology; Cell adhesion molecule","score_opus":0.03429302332067758,"score_gpt":0.47215389189784834,"score_spread":0.43786086857717077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908252111","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6900581,0.000056614423,0.30402583,0.0029008288,0.00036249164,0.0007289759,0.0000019720183,0.000032465654,0.001832721],"genre_scores_gemma":[0.43036944,0.000009506894,0.56796306,0.0006750157,0.000104132785,0.00006365881,0.00004006576,0.00002724805,0.00074786873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964773,0.001831647,0.00039816136,0.000744863,0.00013362954,0.00041437295],"domain_scores_gemma":[0.998615,0.00017945719,0.000045774148,0.00088766235,0.000096116935,0.00017597654],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018914563,0.00016183527,0.0004005711,0.0007657062,0.000018217532,0.000010761024,0.00020619984,0.00014888823,0.0008210807],"category_scores_gemma":[0.00083214033,0.00015499347,0.00008053623,0.0008365839,0.00007569155,0.000040672247,0.00013929392,0.00064419885,0.00017424776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019010612,0.000352793,0.04726569,0.00003674351,0.000007384382,0.000043386455,0.00009619153,0.00014206066,0.937448,0.00033663437,0.0000595897,0.014021387],"study_design_scores_gemma":[0.0016379067,0.0011223351,0.058433063,0.000027886414,0.000014429432,0.000066555986,0.00023850918,0.0034996187,0.9078798,0.0016750798,0.025164612,0.00024015663],"about_ca_topic_score_codex":0.00017792635,"about_ca_topic_score_gemma":0.00006856915,"teacher_disagreement_score":0.26393723,"about_ca_system_score_codex":0.00022506014,"about_ca_system_score_gemma":0.000079392354,"threshold_uncertainty_score":0.89902574},"labels":[],"label_agreement":null},{"id":"W2908499227","doi":"10.1007/978-1-4939-9036-8_4","title":"Quantification of T-Cell Migratory Phenotypes Using High-Content Analysis","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Lee Kong Chian School of Medicine, Nanyang Technological University; Ministry of Education, India; Ministry of Earth Sciences; Nanyang Technological University","keywords":"Phenotype; Biology; Population; High-content screening; Computational biology; Cell; Cell biology; Genetics; Medicine; Gene","score_opus":0.03170586595400255,"score_gpt":0.37511553399077685,"score_spread":0.3434096680367743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908499227","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4934911,0.0006335928,0.50555485,0.0000063080115,0.00002184338,0.00010812862,0.0000023345483,0.000006053657,0.00017577336],"genre_scores_gemma":[0.5574642,0.00004991853,0.4422103,0.0000724045,0.00001004791,0.000008224101,0.000087715154,0.000013005177,0.0000842349],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978818,0.00084711955,0.00045438277,0.0005310638,0.00007112021,0.00021446936],"domain_scores_gemma":[0.99874,0.00003884039,0.00025464655,0.00079880754,0.0001341355,0.000033564127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010470402,0.00016906434,0.0004438815,0.0003973398,0.000015120858,0.0000069153216,0.0002837023,0.0002537874,0.000031356227],"category_scores_gemma":[0.00013489349,0.0001659441,0.0002812976,0.0006111743,0.00010300305,0.0000029145995,0.00012730854,0.00010087066,0.0000034276632],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027381004,0.00007693967,0.02952337,0.000016114074,0.00025472578,0.0000012661997,0.000013025641,0.0005375066,0.9681135,0.00026412585,0.0000063610987,0.0011657076],"study_design_scores_gemma":[0.0002169041,0.00011606654,0.0017486814,0.0000041131884,0.00025240303,8.666385e-7,0.00003766282,0.0012656685,0.9954855,0.00030770147,0.00039037806,0.00017409133],"about_ca_topic_score_codex":0.00036900904,"about_ca_topic_score_gemma":0.000050481412,"teacher_disagreement_score":0.06397307,"about_ca_system_score_codex":0.00002226589,"about_ca_system_score_gemma":0.000040853894,"threshold_uncertainty_score":0.6767004},"labels":[],"label_agreement":null},{"id":"W2908613263","doi":"10.1007/978-1-4939-8988-1_11","title":"CalCleaveMKL: a Tool for Calpain Cleavage Prediction","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"","keywords":"Calpain; Cleavage (geology); Proteolysis; Computer science; Protease; Computational biology; Artificial intelligence; Machine learning; Biological system; Biology; Chemistry; Biochemistry; Enzyme","score_opus":0.01124230318154624,"score_gpt":0.3498787027799685,"score_spread":0.3386363995984223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2908613263","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1363517,0.00020231132,0.8614267,0.00012920717,0.00052085094,0.00079801236,0.000022902392,0.00002344709,0.0005248515],"genre_scores_gemma":[0.20739944,0.000046376634,0.78618205,0.0017015294,0.0003364957,0.0004440762,0.0007055695,0.00007580146,0.003108649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824697,0.00061328936,0.00029959957,0.00050171395,0.000055629014,0.0002827908],"domain_scores_gemma":[0.9993877,0.000059959933,0.00007666875,0.00037443655,0.00005541142,0.000045854824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011329983,0.00016028585,0.00020121131,0.000108992754,0.0000377519,0.000010647001,0.0001243415,0.00038764763,0.000045037672],"category_scores_gemma":[0.00037946,0.00015303813,0.0001532374,0.00013284001,0.00006368899,0.0000027737697,0.000072794035,0.00011179657,0.00001109677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001873966,0.000039800176,0.0050913733,0.000024247029,0.00002911084,9.751413e-7,0.000013147779,0.00019379008,0.9691164,0.0016048753,0.0003859259,0.023312991],"study_design_scores_gemma":[0.0015990096,0.0007072512,0.0020967068,0.000013495503,0.000016176657,0.000017188097,0.000031090054,0.0030161173,0.81918603,0.0023071584,0.1707417,0.00026809005],"about_ca_topic_score_codex":0.000008519095,"about_ca_topic_score_gemma":0.000004951585,"teacher_disagreement_score":0.17035578,"about_ca_system_score_codex":0.00003110947,"about_ca_system_score_gemma":0.000047156045,"threshold_uncertainty_score":0.62407136},"labels":[],"label_agreement":null},{"id":"W2909343545","doi":"10.1007/978-1-4939-9068-9_6","title":"A Specialized Method to Resolve Fine 3D Features of Astrocytes in Nonhuman Primate (Marmoset, Callithrix jacchus) and Human Fixed Brain Samples","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Marmoset; Callithrix; Immunolabeling; Neuroscience; STED microscopy; Biology; Primate; Astrocyte; Confocal microscopy; Microglia; Human brain; Cell biology; Central nervous system; Computer science; Immunology; Immunohistochemistry; Superresolution; Artificial intelligence","score_opus":0.03879728981711413,"score_gpt":0.4079041462316846,"score_spread":0.36910685641457047,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909343545","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4647757,0.000039447328,0.53313214,0.00054462656,0.0001515944,0.0007522804,0.000023028048,0.00003692027,0.0005442958],"genre_scores_gemma":[0.018407632,0.00000971654,0.97917515,0.0020364113,0.000028308486,0.0000526306,0.000012456864,0.00003435796,0.00024335441],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.994084,0.004003249,0.0006070849,0.00079120015,0.00015107734,0.000363375],"domain_scores_gemma":[0.99822515,0.0010351664,0.0001947336,0.00042477975,0.000035885532,0.000084284526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017433146,0.00024734487,0.000561443,0.0005224965,0.000053929507,0.000031414293,0.00032446743,0.00015104341,0.0001258718],"category_scores_gemma":[0.0016538472,0.00023615749,0.000069519265,0.0004967038,0.00009029302,0.000050328956,0.00023778359,0.0002782517,0.000006047159],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102972816,0.00003964885,0.00031971704,0.00002449925,0.0000027342226,0.000019858036,0.00018350799,0.0001238736,0.9291999,0.063501984,0.000020049085,0.006461275],"study_design_scores_gemma":[0.0011583805,0.00035691133,0.0026722797,0.000022758351,0.000004506328,0.00001817998,0.00001205175,0.00020294517,0.98915833,0.004078849,0.002110666,0.00020415249],"about_ca_topic_score_codex":0.000059971917,"about_ca_topic_score_gemma":0.00016888921,"teacher_disagreement_score":0.44636807,"about_ca_system_score_codex":0.000028978997,"about_ca_system_score_gemma":0.00003318216,"threshold_uncertainty_score":0.9630223},"labels":[],"label_agreement":null},{"id":"W2909552796","doi":"10.1007/978-1-4939-8988-1_4","title":"FRET-Based Assays to Determine Calpain Activity","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Calpain; Förster resonance energy transfer; Proteases; Chemistry; Kinetics; Enzyme kinetics; Enzyme; Cleavage (geology); Substrate (aquarium); Fluorometer; Biophysics; Peptide; Biochemistry; Active site; Fluorescence; Biology","score_opus":0.015747346923953458,"score_gpt":0.35893893799151066,"score_spread":0.3431915910675572,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909552796","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37524244,0.00006966207,0.62331593,0.00027421766,0.0002627407,0.00034827038,0.000005061804,0.000014353403,0.00046733647],"genre_scores_gemma":[0.54068846,0.000003605671,0.45635954,0.0020065433,0.000082255814,0.00009283747,0.000064994405,0.000032634198,0.0006691805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99764913,0.0011915311,0.000214078,0.00056083914,0.000075032265,0.0003093936],"domain_scores_gemma":[0.9991859,0.000066914836,0.00006825474,0.00052311784,0.000054013115,0.000101752434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012282797,0.00018960486,0.00023882478,0.00016289622,0.000028839157,0.000010670998,0.00017645895,0.00035066713,0.00011964619],"category_scores_gemma":[0.00039035513,0.00017955495,0.00012510415,0.0002294024,0.00005524458,0.0000019341824,0.000115427785,0.00014659733,0.0000349207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001535571,0.000051448707,0.004549088,0.000012246521,0.000015190602,0.000003714963,0.0000059799077,0.0008749522,0.9572079,0.00016693663,0.00008026851,0.03687871],"study_design_scores_gemma":[0.0007826724,0.0005017048,0.0031584061,0.000011151542,0.0000074369523,0.0000063451357,0.0000065076683,0.0036257457,0.95849305,0.00042626003,0.03270515,0.000275549],"about_ca_topic_score_codex":0.00003173843,"about_ca_topic_score_gemma":0.000027806042,"teacher_disagreement_score":0.1669564,"about_ca_system_score_codex":0.00003766401,"about_ca_system_score_gemma":0.000071531635,"threshold_uncertainty_score":0.73220384},"labels":[],"label_agreement":null},{"id":"W2909785500","doi":"10.1007/978-1-4939-8988-1_20","title":"Genetic Models of Calpain Deficiency and Ectopic Expression","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Calpain; Ectopic expression; Biology; Gene; Transgene; Recombinant DNA; Genotype; Mutation; Cell biology; Function (biology); Genetics; Biochemistry; Enzyme","score_opus":0.012261597256331738,"score_gpt":0.3279160232729696,"score_spread":0.31565442601663785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2909785500","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46871045,0.0011856977,0.52949804,0.000017274859,0.00007879523,0.00014979985,0.000001297178,0.0000034169425,0.00035523612],"genre_scores_gemma":[0.65201813,0.000077360666,0.34759805,0.00010754198,0.000018027298,0.000016545548,0.000013869417,0.0000109060275,0.00013957632],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986964,0.0005530148,0.0002241819,0.00032744635,0.000046481033,0.00015250205],"domain_scores_gemma":[0.9995585,0.000028230314,0.000072509065,0.000271619,0.00003401772,0.00003514454],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048347426,0.000105539206,0.00016627442,0.000089620255,0.000015693195,0.0000033608644,0.00008777964,0.00021673975,0.000023237984],"category_scores_gemma":[0.00009461428,0.000092480084,0.0000526625,0.00009453396,0.00008266926,0.0000018290193,0.000104109684,0.000068834925,0.0000011246358],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032405605,0.000024098343,0.007253938,0.00002509373,0.0000051335837,7.52331e-7,0.000021082404,0.001001823,0.9809793,0.0011711456,0.000006689377,0.009478504],"study_design_scores_gemma":[0.00067657797,0.00031699197,0.0045696013,0.000019970923,0.0000074205313,0.000014968929,0.00003477004,0.004690573,0.9776608,0.010514156,0.0013200408,0.00017415949],"about_ca_topic_score_codex":0.00001619633,"about_ca_topic_score_gemma":0.0000026480784,"teacher_disagreement_score":0.18330766,"about_ca_system_score_codex":0.00000709325,"about_ca_system_score_gemma":0.000026861315,"threshold_uncertainty_score":0.37712282},"labels":[],"label_agreement":null},{"id":"W2910337496","doi":"10.1007/978-1-4939-9007-8_3","title":"Generation of Definitive Neural Progenitor Cells from Human Pluripotent Stem Cells for Transplantation into Spinal Cord Injury","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Western Hospital; University Health Network; St. Michael's Hospital; University of Toronto; Krembil Foundation","funders":"","keywords":"Induced pluripotent stem cell; Transplantation; Progenitor cell; Spinal cord injury; Neural stem cell; Neuroscience; Spinal cord; Stem cell; Progenitor; Biology; Cell biology; Medicine; Embryonic stem cell; Surgery","score_opus":0.09753353744816222,"score_gpt":0.39848928923887644,"score_spread":0.3009557517907142,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2910337496","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62452817,0.000020929017,0.3740496,0.000010913764,0.0007104338,0.00057746365,0.00008093654,0.000014206625,0.0000073519777],"genre_scores_gemma":[0.8397163,0.00002572072,0.15971214,0.0003468897,0.00005066146,0.000087939356,0.000017436563,0.000031756663,0.000011167089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99692315,0.0015542288,0.00047564704,0.00066128356,0.00012024929,0.0002654452],"domain_scores_gemma":[0.99907434,0.00036715018,0.0002241838,0.00023337943,0.00005063545,0.000050306393],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035671893,0.00020583815,0.00034518534,0.00016249043,0.00006121085,0.00001562511,0.00023500509,0.00014272988,0.000014239782],"category_scores_gemma":[0.000054657674,0.00019923093,0.00012813552,0.00016934294,0.000078997546,0.000044038392,0.000048177862,0.00013964437,0.0000070128176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055054907,0.00007793114,0.000037826518,0.000045099234,0.000005756628,0.000015659445,0.000058783706,0.000090565496,0.9889446,0.0029125677,9.568084e-7,0.007259729],"study_design_scores_gemma":[0.00060628186,0.002811309,0.000040448318,0.000013862434,0.000032606436,0.000004924121,0.000013008054,0.0023222,0.9929183,0.0009991511,0.000060060596,0.0001778446],"about_ca_topic_score_codex":0.00002836483,"about_ca_topic_score_gemma":0.000005609427,"teacher_disagreement_score":0.21518813,"about_ca_system_score_codex":0.000024564519,"about_ca_system_score_gemma":0.000028468068,"threshold_uncertainty_score":0.81244016},"labels":[],"label_agreement":null},{"id":"W2911094139","doi":"10.1007/978-1-4939-8988-1_2","title":"Bacterial Expression and Purification of Calpains","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Calpain Protease Function and Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Calpain; Recombinant DNA; Escherichia coli; Protease; Gene isoform; Enzyme; Chemistry; Biochemistry; Biology; Gene","score_opus":0.011866442293053005,"score_gpt":0.3349820342266046,"score_spread":0.3231155919335516,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911094139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6176084,0.00024058034,0.3815064,0.000042255295,0.00016774834,0.00017627134,0.0000025816933,0.000003834146,0.00025185],"genre_scores_gemma":[0.64272636,0.000058973943,0.35664102,0.00010994543,0.000055984212,0.00002573738,0.000125308,0.000014407195,0.00024223849],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988605,0.0005380272,0.00019562227,0.0002649538,0.000034360037,0.000106587075],"domain_scores_gemma":[0.9996008,0.000022692137,0.000081228245,0.00023220852,0.00003456575,0.000028499946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056168,0.00008342557,0.00013586297,0.0000721172,0.0000124708085,0.0000035795874,0.00006441963,0.00021288331,0.000045086177],"category_scores_gemma":[0.00015158624,0.00007468978,0.0000413666,0.000070089285,0.00006857172,0.0000016892521,0.00007043523,0.000055919903,0.0000016653834],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008930987,0.000022113045,0.0056051696,0.000015862232,0.0000070892775,2.3350532e-7,0.000015821897,0.000020925305,0.9857932,0.000803027,0.000013514055,0.007613772],"study_design_scores_gemma":[0.0005284069,0.00016948547,0.0053928704,0.000010320488,0.0000038159233,0.000004460595,0.00001917816,0.00014735186,0.98259515,0.00073964783,0.010298746,0.00009056637],"about_ca_topic_score_codex":0.000007766541,"about_ca_topic_score_gemma":0.0000018174466,"teacher_disagreement_score":0.02511793,"about_ca_system_score_codex":0.0000062237536,"about_ca_system_score_gemma":0.000021041375,"threshold_uncertainty_score":0.3045761},"labels":[],"label_agreement":null},{"id":"W2911431071","doi":"10.1007/978-1-4939-9124-2_21","title":"Generation and Analysis of Viral Vector-Mediated Rodent Models for Parkinson’s Disease","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Parkinson's Disease Mechanisms and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Toronto Western Hospital","funders":"","keywords":"Rodent model; Rodent; Parkinson's disease; Dopaminergic; Disease; Vector (molecular biology); Neuroscience; Viral vector; Medicine; Biology; Pathology; Dopamine; Internal medicine","score_opus":0.038113559630266136,"score_gpt":0.37903229845106834,"score_spread":0.3409187388208022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911431071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5171618,0.0009342987,0.48134816,0.00004939175,0.000057367695,0.00034788193,0.00006988284,0.0000070422043,0.000024182576],"genre_scores_gemma":[0.7159591,0.00006934267,0.28323165,0.00017700037,0.000011059812,0.0000882168,0.0004282869,0.0000108362665,0.000024575387],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9988742,0.00029355657,0.00022996789,0.00036390556,0.00006730076,0.00017107518],"domain_scores_gemma":[0.99941957,0.00008474837,0.000081511665,0.00025075368,0.000050645936,0.00011277194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037114244,0.00012558996,0.00045336832,0.00031819733,0.0000141123555,0.0000039964452,0.00004400076,0.000095212876,0.000024970868],"category_scores_gemma":[0.00011791953,0.00010619115,0.00015960107,0.00024347985,0.000031457548,0.000020508314,0.000030820796,0.000046206016,9.1082325e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048234893,0.0002764355,0.11787307,0.00006061542,0.0012596902,0.000024454615,0.00006086826,0.0012701227,0.86403096,0.0058661536,0.0000032862567,0.008791974],"study_design_scores_gemma":[0.004522815,0.00070093456,0.16838112,0.000026002715,0.0034528207,0.0000020075684,0.000019509613,0.72772104,0.08438233,0.009083388,0.0014349759,0.0002730165],"about_ca_topic_score_codex":0.00003657459,"about_ca_topic_score_gemma":0.000006779748,"teacher_disagreement_score":0.77964866,"about_ca_system_score_codex":0.000042109663,"about_ca_system_score_gemma":0.00004570237,"threshold_uncertainty_score":0.43303496},"labels":[],"label_agreement":null},{"id":"W2911478927","doi":"10.1007/978-1-4939-9030-6_17","title":"Expression and Characterization of MICU2, a Ca2+ Sensor Protein","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Uniporter; Cytoplasm; Cell biology; Mitochondrion; In vitro; Chemistry; Biophysics; Biology; Biochemistry; Cytosol; Enzyme","score_opus":0.012530593460427184,"score_gpt":0.3218068394743146,"score_spread":0.3092762460138874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911478927","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6679743,0.000109227345,0.33117566,0.000036704456,0.00017303249,0.00027285653,0.0000073751326,0.0000042222873,0.00024663095],"genre_scores_gemma":[0.18553554,0.000079312726,0.81246674,0.00042893845,0.000091113,0.000072719646,0.00024286188,0.000032766002,0.0010500223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984421,0.0007788148,0.00023474942,0.00035472782,0.00003313098,0.00015648629],"domain_scores_gemma":[0.99952817,0.000017439443,0.00010678047,0.00027226622,0.000041321757,0.000034044162],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038886748,0.00011759839,0.00021515507,0.00008865836,0.000012703341,0.0000033754593,0.0000843159,0.000286674,0.00005004956],"category_scores_gemma":[0.00014497411,0.00010732119,0.00004565941,0.00008405134,0.000070278606,0.0000018536458,0.00009821662,0.000088687404,0.0000040362306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011485387,0.00002356996,0.0038902627,0.000023600334,0.000007978761,0.000001876977,0.000028641058,0.000002343569,0.99349195,0.00042083612,0.0000029387347,0.0019911285],"study_design_scores_gemma":[0.00054337195,0.00030588906,0.0008020972,0.000016260448,0.0000038238395,0.0000149490825,0.000015169449,0.000030544845,0.99138707,0.00024104585,0.0065258658,0.00011390785],"about_ca_topic_score_codex":0.000006847916,"about_ca_topic_score_gemma":0.0000016494814,"teacher_disagreement_score":0.48243877,"about_ca_system_score_codex":0.0000044149315,"about_ca_system_score_gemma":0.000022742572,"threshold_uncertainty_score":0.4376431},"labels":[],"label_agreement":null},{"id":"W2911724799","doi":"10.1007/978-1-4939-9027-6_13","title":"Gas Chromatography-Mass Spectrometry and Analysis of the Serum Metabolomic Profile Through Extraction and Derivatization of Polar Metabolites","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Health Services; Institute of Cancer Research; University of Calgary","funders":"","keywords":"Metabolome; Derivatization; Metabolomics; Metabolite; Chromatography; Mass spectrometry; Chemistry; Gas chromatography–mass spectrometry; Gas chromatography; Biochemistry","score_opus":0.008550741745445395,"score_gpt":0.3207158590298855,"score_spread":0.3121651172844401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911724799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7973442,0.010886375,0.19105202,0.000061457475,0.00010762843,0.00025614694,0.000054519136,0.0000036218478,0.0002340067],"genre_scores_gemma":[0.62300843,0.002124558,0.3747166,0.00005788868,0.000010870808,0.000012060681,0.000036736044,0.000012810979,0.000020018182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814355,0.00068072876,0.00042367738,0.00044577676,0.000083576124,0.00022266411],"domain_scores_gemma":[0.9990488,0.000081539154,0.00033041227,0.00043603906,0.000077625264,0.000025539039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007730204,0.00019376318,0.00064968516,0.00037144858,0.00003604091,0.0000073954643,0.00016710062,0.00019577614,0.000027156337],"category_scores_gemma":[0.00028609022,0.00014782151,0.00019284939,0.0012267146,0.00024251071,0.0000075169187,0.00018533751,0.00011751995,1.4727205e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023289587,0.000026997117,0.1913229,0.00003154452,0.00079618196,1.6125654e-7,0.000033185726,0.00001586674,0.8010335,0.0060797944,0.0000014237976,0.0006351892],"study_design_scores_gemma":[0.000321179,0.000118933654,0.14698778,0.0000050079543,0.00039094745,0.00000334735,0.00008522507,0.00019642872,0.8483852,0.0028554534,0.00052031124,0.00013017548],"about_ca_topic_score_codex":0.00004969299,"about_ca_topic_score_gemma":0.000013601018,"teacher_disagreement_score":0.18366459,"about_ca_system_score_codex":0.0000063894877,"about_ca_system_score_gemma":0.00002454735,"threshold_uncertainty_score":0.60279864},"labels":[],"label_agreement":null},{"id":"W2911867574","doi":"10.1007/978-1-4939-9030-6_20","title":"Monitoring Interactions Between S100B and the Dopamine D2 Receptor Using NMR Spectroscopy","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Dopamine receptor D2; Dopamine; Nuclear magnetic resonance spectroscopy; Biophysics; Chemistry; Intracellular; Receptor; Dopamine receptor; Neuroscience; Biochemistry; Biology; Stereochemistry","score_opus":0.02554663089892273,"score_gpt":0.40313989864321587,"score_spread":0.37759326774429314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2911867574","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7217634,0.0013472235,0.27565804,0.00015425243,0.00032835023,0.0002741855,0.000005364291,0.000008155864,0.00046108026],"genre_scores_gemma":[0.47432357,0.00019683207,0.524687,0.00013511561,0.00036796453,0.000034353965,0.000022168897,0.00003122201,0.0002017503],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981857,0.0007876996,0.00025922855,0.00042406542,0.000048359427,0.0002949413],"domain_scores_gemma":[0.99932534,0.00010334656,0.00009683092,0.00039035606,0.00003667503,0.000047471076],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008759562,0.00018105292,0.00028611146,0.00008088756,0.00006613707,0.000023623375,0.00020917629,0.00016875833,0.00003101969],"category_scores_gemma":[0.00021403063,0.00013616301,0.000095130104,0.00014080995,0.00019149091,0.0000040050472,0.00023311863,0.00024106525,0.0000061619185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006705761,0.00001273853,0.031916242,0.000007210423,0.000048796213,0.0000011167649,0.000026837362,0.00002071489,0.96223676,0.00043304707,0.000003718742,0.0052257525],"study_design_scores_gemma":[0.0010232743,0.00016843266,0.0013952228,0.000027101129,0.000020987076,0.000013566433,0.00009645546,0.00016596734,0.98682255,0.00095959316,0.009113577,0.00019328074],"about_ca_topic_score_codex":0.000083966144,"about_ca_topic_score_gemma":0.000005176387,"teacher_disagreement_score":0.24902898,"about_ca_system_score_codex":0.000022842416,"about_ca_system_score_gemma":0.000030267298,"threshold_uncertainty_score":0.55525666},"labels":[],"label_agreement":null},{"id":"W2912012071","doi":"10.1007/978-1-4939-9030-6_16","title":"Characterization of the EF-Hand Calcium-Binding Domains of Human Plastins","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Adhesion Molecules Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"EF hand; Calmodulin; Actin; Calcium-binding protein; Calponin; Binding domain; Linker; Cytoskeleton; Cell biology; Chemistry; Actin cytoskeleton; Calcium; Biophysics; Biochemistry; Biology; Binding site; Cell","score_opus":0.04129651803304486,"score_gpt":0.43002597522012453,"score_spread":0.3887294571870797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912012071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8870101,0.000025421341,0.11143255,0.00008839869,0.00010832196,0.00043617527,0.000007510492,0.000004872692,0.00088662666],"genre_scores_gemma":[0.9416192,0.000007700027,0.057751063,0.00008225324,0.000015450252,0.000012229537,0.000035804896,0.000021259571,0.0004550427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99807465,0.0009389377,0.0003778872,0.00023881264,0.00015319715,0.0002164939],"domain_scores_gemma":[0.99909633,0.0001744479,0.00016718822,0.00043703895,0.00008389462,0.00004111157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008860162,0.00010569421,0.00038287503,0.00023472778,0.000026690175,0.00000299275,0.00019709938,0.00016787046,0.00015204234],"category_scores_gemma":[0.0004340415,0.000075218624,0.000113257905,0.0004103988,0.00023717129,0.000010169965,0.00019008217,0.00024240886,0.0000056615545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052530893,0.000064576794,0.047977626,0.0000932849,0.000024187488,0.000005623786,0.000094692776,0.0000023827097,0.94886905,0.0012764288,8.7813635e-7,0.0015387308],"study_design_scores_gemma":[0.0008414037,0.00030653135,0.037023578,0.0000740313,0.000017662074,0.0000090757785,0.0000244793,0.00014288926,0.96093005,0.00023521221,0.00033427027,0.000060833612],"about_ca_topic_score_codex":0.000027673837,"about_ca_topic_score_gemma":0.0000032388073,"teacher_disagreement_score":0.05460907,"about_ca_system_score_codex":0.00004170982,"about_ca_system_score_gemma":0.0000677317,"threshold_uncertainty_score":0.30673265},"labels":[],"label_agreement":null},{"id":"W2912153281","doi":"10.1007/978-1-4939-9048-1_3","title":"Quantification of Viable but Non-Culturable Cells of Legionella pneumophila","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Legionella pneumophila; Legionella; Microbiology; Biology; Legionnaires' disease; Bacteria; Genetics","score_opus":0.02019356753688328,"score_gpt":0.36416472658178795,"score_spread":0.34397115904490466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912153281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8204896,0.00047820804,0.17624208,0.000063743835,0.00020496624,0.00033138675,0.00001250216,0.0000037878922,0.002173741],"genre_scores_gemma":[0.889465,0.00022745905,0.10925962,0.000058617163,0.000028249538,0.000018516657,0.000066542656,0.00002073096,0.0008552715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982243,0.00047910612,0.00043372702,0.0004509712,0.00010314584,0.0003087501],"domain_scores_gemma":[0.9989349,0.00005891115,0.0001922997,0.0005985494,0.00016631698,0.00004899699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010066947,0.00015916684,0.00036805414,0.00014226677,0.00001978709,0.0000052713067,0.00036752023,0.00031415932,0.00001620271],"category_scores_gemma":[0.0001142973,0.00014192249,0.000135836,0.00027296456,0.00019514015,0.0000034710529,0.00015821937,0.0001466817,0.000013049501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007588821,0.00009772526,0.0044205673,0.00007834307,0.000035810564,0.0000018378361,0.000029107163,0.00046350513,0.9932718,0.000764813,0.000048370563,0.0007122143],"study_design_scores_gemma":[0.0005190116,0.00031891433,0.00035416058,0.000019600828,0.000008382337,0.0000050972412,0.00008699686,0.00033896338,0.99478495,0.00063511357,0.0027781874,0.00015060524],"about_ca_topic_score_codex":0.00013558216,"about_ca_topic_score_gemma":0.0000043062123,"teacher_disagreement_score":0.068975404,"about_ca_system_score_codex":0.000012519993,"about_ca_system_score_gemma":0.0000877572,"threshold_uncertainty_score":0.5787431},"labels":[],"label_agreement":null},{"id":"W2912391906","doi":"10.1007/978-1-4939-9124-2_7","title":"Alpha-Synuclein Proximity Ligation Assay (AS-PLA) in Brain Sections to Probe for Alpha-Synuclein Oligomers","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Parkinson's Disease Mechanisms and Treatments","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Neurological Institute and Hospital; McGill University","funders":"Medical Research Council; Parkinson's UK","keywords":"Alpha-synuclein; Synucleinopathies; Alpha (finance); Proximity ligation assay; Ligation; Chemistry; Pathology; Molecular biology; Neuroscience; Medicine; Biology; Parkinson's disease; Biochemistry; Disease; Surgery","score_opus":0.02252782725675052,"score_gpt":0.39028983563306074,"score_spread":0.36776200837631023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912391906","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52680963,0.00013888051,0.46706092,0.0020777518,0.0003225976,0.0027297204,0.00003190307,0.00005725925,0.0007712974],"genre_scores_gemma":[0.37996814,0.000011767705,0.61577374,0.0025302796,0.000039778093,0.0010329806,0.00009914852,0.0000604056,0.0004837921],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99709135,0.00095424993,0.00045235088,0.00080066634,0.00013940348,0.0005620046],"domain_scores_gemma":[0.9987926,0.00030052953,0.0001174815,0.00048656348,0.000086536755,0.0002163065],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018553179,0.0002972643,0.0006160272,0.00054445484,0.000052904226,0.000015963271,0.00015906472,0.0003270518,0.000105291445],"category_scores_gemma":[0.0010901882,0.00027969354,0.00019462347,0.0006011391,0.00004964531,0.00006273588,0.000090636364,0.0002484807,0.000072689785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004011768,0.000519331,0.012930514,0.000085465064,0.00014596262,0.00006836954,0.00020403684,0.000046880297,0.9520887,0.007125567,0.0000664836,0.026317513],"study_design_scores_gemma":[0.010728733,0.0039258185,0.049509414,0.0002955424,0.0002637356,0.00009430292,0.00028678554,0.0037668706,0.83324707,0.051370263,0.045603603,0.0009078411],"about_ca_topic_score_codex":0.00019307745,"about_ca_topic_score_gemma":0.000051619176,"teacher_disagreement_score":0.14871277,"about_ca_system_score_codex":0.00028738126,"about_ca_system_score_gemma":0.0001540726,"threshold_uncertainty_score":0.99996555},"labels":[],"label_agreement":null},{"id":"W2912740155","doi":"10.1007/978-1-4939-8979-9_10","title":"Expansion and Determination of Antigen-Reactive T Cells by Flow Cytometry","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Sciences North","funders":"","keywords":"Epitope; Antigen; Flow cytometry; T cell; CD8; Cytotoxic T cell; Antigen-presenting cell; Human leukocyte antigen; Biology; Chemistry; Cell biology; Immunology; Molecular biology; In vitro; Immune system; Biochemistry","score_opus":0.009654594884398127,"score_gpt":0.31351097015215446,"score_spread":0.30385637526775633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2912740155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72387713,0.004477779,0.2702735,0.000035474874,0.0006314107,0.00024406353,0.00001928359,0.000019070876,0.00042226104],"genre_scores_gemma":[0.80173707,0.00034031708,0.1970989,0.00014679742,0.00000578379,0.000017571929,0.00010136142,0.000022624648,0.0005296016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731964,0.0014983354,0.00037143566,0.00045168554,0.00001967777,0.00033920686],"domain_scores_gemma":[0.99901724,0.00041118712,0.00018041652,0.00032160504,0.00005437429,0.00001515136],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072710396,0.00020108146,0.00050160283,0.00030476294,0.000035089124,0.000003485461,0.00020300865,0.00062170497,0.0001912796],"category_scores_gemma":[0.000109939494,0.00018121724,0.00007482422,0.0002277386,0.00032705226,0.000039382725,0.00016242778,0.0003307748,0.00005954471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106739135,0.00010515323,0.0026337157,0.000018326877,0.000044581102,0.000003776438,0.00015234301,0.000001147478,0.94814974,0.00021068651,0.000026181884,0.048547596],"study_design_scores_gemma":[0.001138855,0.00041947427,0.00033171737,0.000016514436,0.000015779204,0.000030733583,0.000114885624,0.000061661405,0.99231935,0.0008876411,0.0044784653,0.00018491944],"about_ca_topic_score_codex":0.00007885013,"about_ca_topic_score_gemma":0.0000025401976,"teacher_disagreement_score":0.0778599,"about_ca_system_score_codex":0.000025408077,"about_ca_system_score_gemma":0.000027150068,"threshold_uncertainty_score":0.73898244},"labels":[],"label_agreement":null},{"id":"W2913330875","doi":"10.1007/978-1-4939-9021-4_15","title":"Decellularizing and Recellularizing Adult Mouse Kidneys","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"","keywords":"Decellularization; Extracellular matrix; Scaffold; Sodium dodecyl sulfate; Cell biology; Lysis; Chemistry; Extracellular; Matrix (chemical analysis); Anatomy; Biomedical engineering; Biophysics; Biology; Biochemistry; Medicine; Chromatography","score_opus":0.014510067550525576,"score_gpt":0.3564631243431521,"score_spread":0.3419530567926265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913330875","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29511443,0.00830554,0.694735,0.00062112237,0.0004268085,0.00026415644,9.166432e-7,0.00004844424,0.00048362542],"genre_scores_gemma":[0.051145915,0.00021144822,0.94494075,0.00040438492,0.00009898502,0.000016288808,0.000026553851,0.000038639144,0.0031170396],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986341,0.00037315267,0.00025593644,0.0003787241,0.00006844397,0.00028965087],"domain_scores_gemma":[0.9993716,0.0001143232,0.00004405874,0.0002944991,0.00004806241,0.00012748114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075375574,0.00017637789,0.000443408,0.00021868701,0.000021561085,0.000005790903,0.00006514839,0.00020872774,0.00004597994],"category_scores_gemma":[0.00059635454,0.0001426786,0.000051504463,0.00020581229,0.00009121967,0.000014002693,0.00006176262,0.00037296955,0.000012966703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021242504,0.00002322856,0.012315347,0.00007123063,0.000035949444,0.00006087136,0.00011396785,0.000026345102,0.9686411,0.007373068,0.000011919737,0.011305724],"study_design_scores_gemma":[0.0022426452,0.0004825126,0.00055791944,0.00015963193,0.000050126262,0.00016383534,0.000121554796,0.0045787664,0.9707327,0.0005223959,0.020116733,0.0002711873],"about_ca_topic_score_codex":0.000034249562,"about_ca_topic_score_gemma":8.330791e-7,"teacher_disagreement_score":0.25020579,"about_ca_system_score_codex":0.000035156423,"about_ca_system_score_gemma":0.00003012272,"threshold_uncertainty_score":0.58182645},"labels":[],"label_agreement":null},{"id":"W2913747038","doi":"10.1007/978-1-4939-9009-2_13","title":"Reptile Embryology and Regeneration","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Turtle Biology and Conservation","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Regeneration (biology); Biology; Anatomy; Immunohistochemistry; Pathology; Zoology; Medicine; Cell biology; Immunology","score_opus":0.011556594200916533,"score_gpt":0.33380584889036014,"score_spread":0.3222492546894436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913747038","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74879736,0.0001234545,0.24524774,0.00045719865,0.00016849823,0.000113840484,4.931456e-7,0.000012052438,0.005079403],"genre_scores_gemma":[0.23581721,0.000029218672,0.7606572,0.0021987872,0.000015440299,0.000027921562,0.00001692797,0.000007935171,0.0012293811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883914,0.0006394754,0.00011684092,0.00026043318,0.000017903338,0.00012621636],"domain_scores_gemma":[0.9997156,0.00007181851,0.000036359015,0.00015639678,0.0000024802266,0.000017334218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005741945,0.00006172427,0.00010342058,0.000027352871,0.000018650651,0.0000025331128,0.00007013289,0.00016277086,0.00056511245],"category_scores_gemma":[0.00008744333,0.000055265904,0.000014934569,0.00008565125,0.00011697269,0.000023788141,0.00009060228,0.00008510079,0.00008452991],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008300059,0.0000059528197,0.16483903,8.312757e-7,0.0000020837078,0.0000016674427,0.000031964748,0.000046977188,0.8101489,0.0050294576,0.000027332737,0.019857522],"study_design_scores_gemma":[0.001007405,0.00048697018,0.39345762,0.000006666245,0.000013648819,0.000068026886,0.00005673589,0.0045685866,0.41967124,0.13390075,0.046313517,0.00044885062],"about_ca_topic_score_codex":0.000053528216,"about_ca_topic_score_gemma":0.000028910676,"teacher_disagreement_score":0.51540947,"about_ca_system_score_codex":0.000020422785,"about_ca_system_score_gemma":0.0000038224907,"threshold_uncertainty_score":0.6187585},"labels":[],"label_agreement":null},{"id":"W2913994782","doi":"10.1007/978-1-4939-9027-6_14","title":"Metabolite Profiling of Clinical Cancer Biofluid Samples by NMR Spectroscopy","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Alberta Innovates - Health Solutions","keywords":"Metabolomics; Nuclear magnetic resonance spectroscopy; Metabolite; Proton NMR; Chemistry; Metabolite profiling; Nuclear magnetic resonance; Chromatography; Biochemistry","score_opus":0.03424310039713951,"score_gpt":0.44699721622870864,"score_spread":0.4127541158315691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2913994782","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6802753,0.025660114,0.29167518,0.00013448365,0.0006607508,0.00039020908,0.00012212862,0.000010413844,0.0010713905],"genre_scores_gemma":[0.089221604,0.007642591,0.90195626,0.00051185396,0.0001611742,0.000073674186,0.00015757301,0.000046700803,0.0002285685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99670017,0.001100828,0.0008521701,0.00077777193,0.000095658026,0.0004734249],"domain_scores_gemma":[0.9988003,0.0001211531,0.0003037558,0.0005987438,0.00009980492,0.000076239034],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021866367,0.00027484645,0.0009030215,0.00014138063,0.000026368318,0.000007892862,0.0003733846,0.00036745315,0.00007318176],"category_scores_gemma":[0.000672965,0.00024129872,0.00028027283,0.00028698833,0.00022693932,0.0000028303295,0.0002940988,0.00025050013,0.0000042408838],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102643724,0.00008039,0.09948562,0.000026330856,0.00019844525,9.0218686e-7,0.000007764793,0.000009332425,0.892125,0.0040804353,0.00010034848,0.0037827897],"study_design_scores_gemma":[0.0007978621,0.00035224197,0.0022243056,0.000007891009,0.000039926697,0.0000019434967,0.000032553755,0.000036927562,0.9554235,0.0015741253,0.03925748,0.00025129164],"about_ca_topic_score_codex":0.00010949143,"about_ca_topic_score_gemma":0.000010442724,"teacher_disagreement_score":0.61028105,"about_ca_system_score_codex":0.000012797606,"about_ca_system_score_gemma":0.00010127067,"threshold_uncertainty_score":0.9839876},"labels":[],"label_agreement":null},{"id":"W2914057372","doi":"10.1007/978-1-4939-9024-5_8","title":"Analyzing Recombinant Protein Production in Pichia pastoris with Targeted Proteomics","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; European Commission","keywords":"Pichia pastoris; Recombinant DNA; Proteomics; Computational biology; Production (economics); Biology; Biochemistry; Gene; Economics","score_opus":0.01201879471229596,"score_gpt":0.3384347568805144,"score_spread":0.32641596216821844,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914057372","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89555055,0.00060254376,0.10202322,0.00022216154,0.00020958547,0.0010969385,0.0000023320124,0.000008712591,0.00028397655],"genre_scores_gemma":[0.47573748,0.00005684536,0.5231317,0.0000422136,0.000057855836,0.00023559689,0.00005687244,0.000037409533,0.0006440158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973923,0.0010142797,0.00030507616,0.0007253105,0.00009068035,0.0004723745],"domain_scores_gemma":[0.9992492,0.000011469782,0.00008786509,0.000503049,0.000087663306,0.000060710787],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012648817,0.00020998291,0.0002855478,0.00023504069,0.000027626582,0.000013002101,0.0002563442,0.00027144147,0.000018387893],"category_scores_gemma":[0.00028376226,0.00017655948,0.000058043806,0.0004717394,0.00009003171,0.00000347935,0.00016409563,0.00033127208,0.000008801197],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002741804,0.00008839414,0.035740472,0.0000361013,0.000026404114,0.0000089367995,0.00003678444,0.00039687604,0.9583481,0.000093992836,0.0000056603203,0.0049441205],"study_design_scores_gemma":[0.000707875,0.0008702255,0.0020853644,0.000041134437,0.0000041141866,0.000012644457,0.000031968895,0.00018547116,0.99339813,0.00065644155,0.0017517918,0.00025481987],"about_ca_topic_score_codex":0.00007608758,"about_ca_topic_score_gemma":0.00007737969,"teacher_disagreement_score":0.42110848,"about_ca_system_score_codex":0.000048709062,"about_ca_system_score_gemma":0.00012494551,"threshold_uncertainty_score":0.71998864},"labels":[],"label_agreement":null},{"id":"W2914803085","doi":"10.1007/978-1-4939-9030-6_13","title":"Expression and Purification of Calmodulin for NMR and Other Biophysical Applications","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ion channel regulation and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; University Health Network","funders":"Canadian Institutes of Health Research","keywords":"Calmodulin; Recombinant DNA; Escherichia coli; Computational biology; Nuclear magnetic resonance spectroscopy; Chemistry; Biochemistry; Biology; Cell biology; Biophysics; Gene; Stereochemistry; Enzyme","score_opus":0.0194193999773666,"score_gpt":0.36028157839263913,"score_spread":0.34086217841527255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2914803085","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21732458,0.0003042217,0.78178936,0.000053807376,0.000049099614,0.00035550972,0.000009417738,0.0000032579046,0.000110742934],"genre_scores_gemma":[0.43719572,0.00005736441,0.56197643,0.00019099588,0.000088215784,0.00020361248,0.00008995614,0.000018088655,0.00017961462],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933296,0.00014942688,0.00014763817,0.00026173316,0.000022363089,0.00008586909],"domain_scores_gemma":[0.99967515,0.000034612367,0.00006393035,0.00016488147,0.00003768916,0.000023742425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002881108,0.000072028626,0.00011783427,0.0000537628,0.000016609865,0.0000030961235,0.00004531462,0.00015741559,0.000005481559],"category_scores_gemma":[0.000053431435,0.00006553003,0.000030077426,0.00005656193,0.00007331314,0.0000015280331,0.00003767518,0.000034540848,6.294602e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049337847,0.00002361674,0.0016437047,0.00002258719,0.0000061005835,1.8281323e-8,0.000015801927,0.000035374815,0.9847008,0.0038104497,0.0000100587295,0.009682153],"study_design_scores_gemma":[0.0005185949,0.00017517024,0.0006610363,0.0000061273577,0.0000056064105,0.000002357725,0.000030962954,0.0017793518,0.96585715,0.0028248157,0.028049137,0.00008968124],"about_ca_topic_score_codex":0.0000035864873,"about_ca_topic_score_gemma":5.9078167e-7,"teacher_disagreement_score":0.21987113,"about_ca_system_score_codex":0.0000034024395,"about_ca_system_score_gemma":0.000009486971,"threshold_uncertainty_score":0.26722372},"labels":[],"label_agreement":null},{"id":"W2915385961","doi":"10.1007/978-1-4939-9136-5_20","title":"Determination of Ligand Binding Affinity and Specificity of Purified START Domains by Thermal Shift Assays Using Circular Dichroism","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metal complexes synthesis and properties","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Circular dichroism; Chemistry; Ligand (biochemistry); Biophysics; Crystallography; Biochemistry; Biology; Receptor","score_opus":0.06052060300224348,"score_gpt":0.36371843374807683,"score_spread":0.30319783074583334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915385961","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7583411,0.0011193393,0.23978414,0.000025466687,0.00006175977,0.00022227863,0.000009141669,0.000004917222,0.00043186912],"genre_scores_gemma":[0.7200498,0.000030417816,0.2798529,0.00002845842,0.000008650921,0.000002585505,0.000006969301,0.0000112425305,0.000008956902],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802357,0.0010509612,0.00039468435,0.0002530073,0.000102659375,0.00017513007],"domain_scores_gemma":[0.9992098,0.00026124946,0.00018621761,0.0002606526,0.000043405613,0.00003864305],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018403019,0.00013141258,0.00055654516,0.00016169001,0.000021961589,0.0000048194174,0.00008581942,0.00016264139,0.00004156814],"category_scores_gemma":[0.0002859294,0.00010597204,0.00008086819,0.00013555601,0.00017380287,0.000026825768,0.00007456966,0.00014626246,7.4010046e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090796966,0.000055993165,0.014047412,0.00014620554,0.00003222845,0.000003956339,0.0001630147,0.0000039458855,0.98007905,0.00053519744,3.1359357e-7,0.00484186],"study_design_scores_gemma":[0.0005477148,0.00027142282,0.0050554033,0.000073952615,0.000051323033,0.000009748281,0.00007389837,0.00071777543,0.99193674,0.0010256481,0.0001322301,0.000104156206],"about_ca_topic_score_codex":0.00007794848,"about_ca_topic_score_gemma":0.0000018867486,"teacher_disagreement_score":0.040068775,"about_ca_system_score_codex":0.000024099862,"about_ca_system_score_gemma":0.00003684077,"threshold_uncertainty_score":0.43214142},"labels":[],"label_agreement":null},{"id":"W2915827996","doi":"10.1007/978-1-4939-9151-8_20","title":"Ultrasensitive Detection of Circulating Tumor DNA in Lymphoma via Targeted Hybridization Capture and Deep Sequencing of Barcoded Libraries","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"DNA; DNA sequencing; Computational biology; Lymphoma; Biology; Genetics; Immunology","score_opus":0.006985122642448207,"score_gpt":0.2719359951556075,"score_spread":0.2649508725131593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915827996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63212824,0.0010467373,0.36653647,0.000006022671,0.000065435095,0.00014810637,0.000009458696,0.0000022798874,0.00005722769],"genre_scores_gemma":[0.88206303,0.000059118487,0.11769066,0.00009114136,0.000014398339,0.000007821113,0.000056253826,0.000015906298,0.0000016803101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871105,0.00041034436,0.00034662022,0.00031850953,0.000040667608,0.00017283282],"domain_scores_gemma":[0.9994096,0.00011953694,0.000182688,0.0001921878,0.000068016685,0.000027966435],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000418477,0.00013059376,0.0002858023,0.00013667703,0.000012994722,0.0000048407824,0.0000725995,0.00016516371,0.00000297233],"category_scores_gemma":[0.0005611173,0.00014118337,0.000049315753,0.00018805472,0.00010557277,0.000004309291,0.0000787988,0.00006522559,1.5134673e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067890396,0.000017397426,0.008385046,0.000043631855,0.000020765427,0.0000070613746,0.00016771113,0.0012306918,0.98279864,0.000275068,1.2579991e-7,0.0069859447],"study_design_scores_gemma":[0.00065129396,0.00016662637,0.0048426064,0.000023882798,0.000010662817,0.00002568996,0.0002120932,0.0049237786,0.9873561,0.0016290472,0.000020504183,0.00013767733],"about_ca_topic_score_codex":0.00024464587,"about_ca_topic_score_gemma":0.00009684033,"teacher_disagreement_score":0.24993476,"about_ca_system_score_codex":0.00003461133,"about_ca_system_score_gemma":0.000089052504,"threshold_uncertainty_score":0.575729},"labels":[],"label_agreement":null},{"id":"W2916484252","doi":"10.1007/978-1-4939-9139-6_10","title":"MRI-Guided Focused Ultrasound for Targeted Delivery of rAAV to the Brain","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":48,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Brain Institute; Sunnybrook Health Science Centre","funders":"National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research","keywords":"Microbubbles; Gene delivery; Parenchyma; Blood–brain barrier; Transgene; In vivo; Medicine; Genetic enhancement; Transduction (biophysics); Pathology; Pharmacology; Central nervous system; Ultrasound; Biology; Gene; Internal medicine; Biophysics; Biochemistry; Radiology","score_opus":0.016737889139551144,"score_gpt":0.329601020988892,"score_spread":0.31286313184934084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916484252","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19392966,0.00034424267,0.8040516,0.0003812662,0.00015164784,0.0006021845,0.000025737441,0.00004038619,0.00047330777],"genre_scores_gemma":[0.1411257,0.000021475224,0.85776925,0.00066834287,0.00003126903,0.00023418845,0.00002878891,0.00003502956,0.000085964384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991071,0.00020833919,0.00024214604,0.00018704777,0.000035273664,0.00022005176],"domain_scores_gemma":[0.9984946,0.0010401667,0.00002858688,0.00036657523,0.00003875135,0.000031291624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006519644,0.00011496437,0.00022792854,0.000090654044,0.000021093001,0.000006177715,0.00026906637,0.000119878496,0.00004350223],"category_scores_gemma":[0.0002498245,0.00008996245,0.00008609124,0.00025438267,0.000034578134,0.000012117551,0.000022035867,0.00009947962,0.000015135776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006963534,0.000010700278,0.00034806778,0.00001588237,0.000036297726,1.2935756e-7,0.00015626241,0.0045817127,0.9860622,0.0033317318,0.00037391717,0.005076097],"study_design_scores_gemma":[0.0006524899,0.00010693826,0.00069399184,0.000010961246,0.00002134569,0.0000061905525,0.00006729311,0.0031726758,0.8678305,0.007982699,0.11921482,0.00024010698],"about_ca_topic_score_codex":0.000023963285,"about_ca_topic_score_gemma":0.000016857994,"teacher_disagreement_score":0.1188409,"about_ca_system_score_codex":0.000023194549,"about_ca_system_score_gemma":0.000015992504,"threshold_uncertainty_score":0.36685625},"labels":[],"label_agreement":null},{"id":"W2916917493","doi":"10.1007/978-1-4939-9139-6_21","title":"AAV-Mediated Gene Delivery to the Lung","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Cystic Fibrosis Canada","keywords":"Genetic enhancement; Gene delivery; Adeno-associated virus; Lung; Nasal administration; Vector (molecular biology); Gene; Virology; Medicine; Biology; Recombinant DNA; Genetics; Internal medicine","score_opus":0.01906799950803965,"score_gpt":0.3963332235713412,"score_spread":0.37726522406330154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2916917493","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8516642,0.002855974,0.14323,0.00078554184,0.0002953559,0.00066088466,0.000018993584,0.000015126751,0.0004739219],"genre_scores_gemma":[0.633372,0.0006178576,0.35140228,0.01210211,0.00034753315,0.00036342823,0.00038393118,0.00014935933,0.0012614968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965775,0.0018144799,0.0002831313,0.0006367642,0.00012253165,0.0005655751],"domain_scores_gemma":[0.99867696,0.00011436654,0.00005607457,0.0009537027,0.00009022834,0.000108663924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019608408,0.00022136708,0.00025593748,0.00015339366,0.000049048802,0.000017080176,0.00071337813,0.00029247787,0.00012515539],"category_scores_gemma":[0.00036703233,0.00017174915,0.00012445927,0.00039059803,0.0000978965,0.0000017409654,0.0004039772,0.00025824466,0.00015197363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005318128,0.000024024814,0.0027599945,0.0000059992076,0.00006544255,0.0000083259865,0.000038773822,0.00041956172,0.98869115,0.00006610541,0.00037121755,0.0070175864],"study_design_scores_gemma":[0.0006307216,0.0013545408,0.00049137644,0.000005418626,0.0000076188244,0.000011040751,0.000027945085,0.00043914656,0.9655565,0.0001688544,0.031052534,0.0002542965],"about_ca_topic_score_codex":0.00003714284,"about_ca_topic_score_gemma":0.00007698092,"teacher_disagreement_score":0.2182922,"about_ca_system_score_codex":0.000037892765,"about_ca_system_score_gemma":0.000118857075,"threshold_uncertainty_score":0.7003727},"labels":[],"label_agreement":null},{"id":"W2918121900","doi":"10.1007/978-1-4939-9118-1_13","title":"Tn7-Based Single-Copy Insertion Vectors for Acinetobacter baumannii","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Acinetobacter baumannii; Biology; Complementation; Gene; Genetics; Computational biology; Microbiology; Bacteria; Phenotype; Pseudomonas aeruginosa","score_opus":0.02048857984884651,"score_gpt":0.36291806506143376,"score_spread":0.34242948521258726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918121900","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53555083,0.00019012581,0.4630206,0.00008411025,0.00042088603,0.00039729828,0.000011275854,0.0000132161185,0.00031165732],"genre_scores_gemma":[0.47607398,0.000010957901,0.5224789,0.00072061474,0.000090329035,0.000045214736,0.00028925817,0.000049727034,0.00024105591],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99778295,0.0006020423,0.00039754054,0.0006955953,0.00006330368,0.0004585642],"domain_scores_gemma":[0.9989541,0.000100999176,0.00015028422,0.0006411705,0.000092332375,0.00006109419],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00076892826,0.00026805318,0.00035512753,0.0001331799,0.000032782747,0.000020154734,0.00031630683,0.00046516597,0.000056994868],"category_scores_gemma":[0.00043494528,0.0002575549,0.00017997819,0.00015484559,0.00012025369,0.000004007706,0.000086711996,0.00012847812,0.000014698489],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003143566,0.00007466232,0.048255544,0.000040529427,0.000034448636,0.0000019427089,0.000008538514,0.00007227516,0.9478523,0.00035564313,0.000077668024,0.0029120517],"study_design_scores_gemma":[0.0012320117,0.0008412067,0.008173578,0.000027773342,0.000016959239,0.0000040984814,0.000016302552,0.00022753405,0.9587246,0.00078784634,0.029603323,0.0003447281],"about_ca_topic_score_codex":0.000011647734,"about_ca_topic_score_gemma":0.000015407943,"teacher_disagreement_score":0.059476856,"about_ca_system_score_codex":0.000049703598,"about_ca_system_score_gemma":0.0000726805,"threshold_uncertainty_score":0.99998766},"labels":[],"label_agreement":null},{"id":"W2918311254","doi":"10.1007/978-1-4939-9012-2_9","title":"Dental Pulp Stem Cells: Isolation, Characterization, Expansion, and Odontoblast Differentiation for Tissue Engineering","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Dental pulp stem cells; Stem cell; Tissue engineering; Cell biology; Progenitor cell; Mesenchymal stem cell; Regeneration (biology); Pulp (tooth); Biology; Biomedical engineering; Dentistry; Medicine","score_opus":0.020628250892080636,"score_gpt":0.3625977117131474,"score_spread":0.3419694608210668,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918311254","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44740644,0.00011479586,0.5516328,0.00005139766,0.00014788494,0.00060352584,0.000004100147,0.000014350736,0.000024688628],"genre_scores_gemma":[0.55422354,0.00006655957,0.44427,0.00013168567,0.00007999914,0.00014038495,0.00019198256,0.000051199764,0.00084465183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987223,0.00028380737,0.00029624844,0.00034642106,0.00009207965,0.00025910183],"domain_scores_gemma":[0.9993356,0.00021446947,0.000067249224,0.00020680332,0.000095275216,0.000080610465],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007155607,0.00013445801,0.00029967498,0.00020823706,0.000024619307,0.000014973845,0.00007034679,0.00017793305,0.00006837379],"category_scores_gemma":[0.00014411686,0.00012378929,0.00003736955,0.00017396086,0.000024075602,0.000038783102,0.00006358754,0.00013189018,0.000008642045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005438565,0.000026113235,0.028291952,0.00014652265,0.000018588398,0.000002858883,0.000081055754,0.000013869219,0.9573682,0.0004867108,0.0000020166653,0.013507725],"study_design_scores_gemma":[0.0010750463,0.00035672684,0.025911214,0.00005645895,0.000019401206,0.000017140403,0.000045178145,0.022266453,0.9476563,0.000091277696,0.0023578058,0.00014699444],"about_ca_topic_score_codex":0.000010042822,"about_ca_topic_score_gemma":0.0000032453345,"teacher_disagreement_score":0.107362784,"about_ca_system_score_codex":0.000056453187,"about_ca_system_score_gemma":0.00002734646,"threshold_uncertainty_score":0.50479805},"labels":[],"label_agreement":null},{"id":"W2918403649","doi":"10.1007/978-1-4939-9012-2_36","title":"Protocol GenoDENT: Implementation of a New NGS Panel for Molecular Diagnosis of Genetic Disorders with Orodental Involvement","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bone and Dental Protein Studies","field":"Medicine","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"European Organisation for Rare Diseases; DNA Genotek","keywords":"Amelogenesis imperfecta; Craniofacial; Phenotype; Biology; Bioinformatics; Genetics; Medicine; Gene; Enamel paint; Dentistry","score_opus":0.03926557072621405,"score_gpt":0.43038882704919706,"score_spread":0.391123256322983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918403649","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48203143,0.00041729893,0.46510774,0.00016786058,0.000037058806,0.052130956,0.000011331827,0.000009420728,0.00008690522],"genre_scores_gemma":[0.13110723,0.000028588667,0.82419103,0.0003382136,0.000011856724,0.044219546,0.00003264843,0.000034922632,0.000035969984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866,0.00018524451,0.0004722193,0.0003205778,0.00013044164,0.00023147381],"domain_scores_gemma":[0.999337,0.000058528556,0.0002189763,0.0002655639,0.000063878346,0.0000560319],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003377134,0.00016787679,0.0004912199,0.00014368117,0.000013456461,0.0000024348672,0.00009630806,0.0000898917,0.00007508605],"category_scores_gemma":[0.00005100661,0.0001337671,0.00012334403,0.00019520996,0.00009848657,0.000016554963,0.00009783241,0.0000741735,0.0000010175897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044983882,0.00020272561,0.36166486,0.00054060447,0.00022455622,0.000005972781,0.00040795724,0.000027246486,0.5874633,0.00042757898,0.00001875093,0.048566613],"study_design_scores_gemma":[0.007800588,0.0041145324,0.030075138,0.00011164113,0.00014413091,0.0000072737807,0.0010163059,0.000045925237,0.95094794,0.004050292,0.0014960882,0.00019015023],"about_ca_topic_score_codex":0.0006953817,"about_ca_topic_score_gemma":0.000088623405,"teacher_disagreement_score":0.36348462,"about_ca_system_score_codex":0.000041257535,"about_ca_system_score_gemma":0.00009292734,"threshold_uncertainty_score":0.5454864},"labels":[],"label_agreement":null},{"id":"W2918649353","doi":"10.1007/978-1-4939-9130-3_1","title":"Quantification of Oxysterol Nuclear Receptor Ligands by LC/MS/MS","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Oxysterol; Chemistry; Pharmacology; Computational biology; Medicine; Biology; Biochemistry","score_opus":0.01987820190491569,"score_gpt":0.3678115659741089,"score_spread":0.34793336406919323,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918649353","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8912875,0.0010011279,0.10449347,0.0006716104,0.0007037458,0.00041835188,0.000012637406,0.00003107095,0.0013804532],"genre_scores_gemma":[0.572046,0.00020698078,0.42442203,0.001794429,0.00014772492,0.000031161086,0.00013681606,0.00006959163,0.0011453024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984052,0.00047641541,0.00042966206,0.0003689848,0.00008979827,0.00022992304],"domain_scores_gemma":[0.9991059,0.000094291616,0.00015047153,0.0005194731,0.00006195349,0.000067951354],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010740662,0.00014873162,0.0005406034,0.00016389102,0.00001226553,0.00000512137,0.00015044797,0.00027078073,0.00025807964],"category_scores_gemma":[0.00023679445,0.00012652531,0.00011261588,0.00022996827,0.00009483329,0.000022919105,0.00005659514,0.00022984607,0.00007318827],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107566106,0.000101737525,0.0061892397,0.00006226622,0.00003397386,0.0000010796247,0.00015753481,0.0000017818378,0.97423625,0.0013206112,0.00023069784,0.017557252],"study_design_scores_gemma":[0.001723171,0.00038332416,0.0063119023,0.00006332968,0.000045306813,0.0000111723675,0.000056541194,0.00020614376,0.8443173,0.00030098076,0.14643064,0.00015017301],"about_ca_topic_score_codex":0.00005032921,"about_ca_topic_score_gemma":0.0000010286598,"teacher_disagreement_score":0.31992856,"about_ca_system_score_codex":0.000021899506,"about_ca_system_score_gemma":0.00002360001,"threshold_uncertainty_score":0.5159552},"labels":[],"label_agreement":null},{"id":"W2918817767","doi":"10.1007/978-1-4939-9130-3_9","title":"Quantifying Cellular Cholesterol Efflux","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cholesterol and Lipid Metabolism","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Efflux; ABCA1; Cholesterol; ABCG1; Reverse cholesterol transport; ATP-binding cassette transporter; Flux (metallurgy); Biochemistry; Biology; Cell biology; Transporter; Chemistry; Lipoprotein; Gene","score_opus":0.040163954938963256,"score_gpt":0.41195133013784324,"score_spread":0.37178737519888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918817767","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7223567,0.0007307466,0.27292553,0.00034105027,0.00085698836,0.00041226452,0.0000015582687,0.00004642921,0.002328726],"genre_scores_gemma":[0.4292149,0.000041489202,0.5668028,0.002912608,0.00017879777,0.000033991706,0.0000294402,0.00005009173,0.00073587906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978218,0.0007832334,0.00037982326,0.0005013421,0.00009884845,0.00041491637],"domain_scores_gemma":[0.9990301,0.00013028458,0.00008034557,0.0006108387,0.0000405298,0.00010791293],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012591551,0.0002122662,0.000610061,0.00026285995,0.00001874757,0.000011432795,0.00016427682,0.0002800036,0.00018734012],"category_scores_gemma":[0.00022178415,0.00018021888,0.00016237039,0.0002798574,0.00007593382,0.000028472343,0.00010840236,0.0004258957,0.00017276387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032628584,0.000062318635,0.09660642,0.000058848153,0.000029026478,0.000014850525,0.00009036002,0.0000074907143,0.8817876,0.0014975488,0.000007370796,0.019805528],"study_design_scores_gemma":[0.0043140277,0.0003564369,0.06483688,0.00012275833,0.00008856621,0.000103947896,0.0000762056,0.00057146215,0.8480022,0.0009697892,0.0801876,0.00037015526],"about_ca_topic_score_codex":0.000037262922,"about_ca_topic_score_gemma":0.000002996148,"teacher_disagreement_score":0.29387727,"about_ca_system_score_codex":0.00003413668,"about_ca_system_score_gemma":0.00004131586,"threshold_uncertainty_score":0.73491126},"labels":[],"label_agreement":null},{"id":"W2918964428","doi":"10.1007/978-1-4939-9012-2_12","title":"Multiwalled Carbon Nanotubes for Dental Applications","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbon Nanotubes in Composites","field":"Materials Science","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"University of Saskatchewan","keywords":"Biocompatibility; Materials science; Carbon nanotube; Polyethylene glycol; Drug delivery; Nanotechnology; Surface modification; Covalent bond; Membrane; Chemical engineering; Chemistry; Organic chemistry","score_opus":0.014975058796805886,"score_gpt":0.377794897107469,"score_spread":0.3628198383106631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2918964428","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.471881,0.0004628424,0.5249281,0.000045579356,0.00057475595,0.000951042,0.000012388285,0.00005236076,0.0010919152],"genre_scores_gemma":[0.16307603,0.0000061685546,0.8359349,0.00018048813,0.000047055146,0.0006208207,0.000014917998,0.000023859124,0.00009578451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982574,0.00051590777,0.00031410743,0.0005091059,0.00006651491,0.0003369814],"domain_scores_gemma":[0.9987001,0.0006560634,0.00007685351,0.0004883675,0.00003829055,0.000040320658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010376764,0.00015494639,0.00031836948,0.00014166493,0.000030052779,0.000019089905,0.0004105531,0.00017564528,0.00007527742],"category_scores_gemma":[0.00016384004,0.00014825824,0.00010025266,0.0001823919,0.000107067164,0.000019827752,0.00018052886,0.00009308692,0.000025487894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032133612,0.00004227499,0.0030017358,0.000018322233,0.00000689027,0.0000012766693,0.000034365905,0.000069028676,0.988344,0.0060720406,0.0000023547314,0.0023755396],"study_design_scores_gemma":[0.0006629302,0.00009785575,0.00008000825,0.000007633318,0.000011218031,0.000008304642,0.000019404446,0.0021543659,0.98623294,0.007494796,0.0030449955,0.00018552394],"about_ca_topic_score_codex":0.000066796936,"about_ca_topic_score_gemma":0.000012749087,"teacher_disagreement_score":0.31100675,"about_ca_system_score_codex":0.000069102716,"about_ca_system_score_gemma":0.000033930894,"threshold_uncertainty_score":0.6045796},"labels":[],"label_agreement":null},{"id":"W2919729982","doi":"10.1007/978-1-4939-9012-2_20","title":"Silver-Albumin Tissue Staining Protocol to Visualize Odontogenesis in Whole Embryos","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"dental development and anomalies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"National Research Council Canada; Western Economic Diversification Canada; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Stain; Histology; Biology; Anatomy; Staining; Biomedical engineering; Pathology; Computer science; Medicine; Genetics","score_opus":0.015878268618628795,"score_gpt":0.413010295725856,"score_spread":0.3971320271072272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919729982","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.830604,0.00019604567,0.1422953,0.00026474253,0.0003411477,0.021823686,0.000012004491,0.000029752198,0.0044332817],"genre_scores_gemma":[0.13716087,0.000010414122,0.8208933,0.002330794,0.00012630889,0.0309172,0.00017745516,0.00012353722,0.00826015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99754095,0.00072973483,0.0004342426,0.0006901144,0.00009155313,0.00051338266],"domain_scores_gemma":[0.99935967,0.000036521727,0.000081748236,0.00039371237,0.000040323943,0.000088032844],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010283149,0.00026858773,0.00036739217,0.00024892512,0.000026187157,0.000022645301,0.00036327317,0.00030447738,0.00008190377],"category_scores_gemma":[0.00022462485,0.00026751013,0.00007574332,0.00035083698,0.000056709247,0.0000048653164,0.0003878027,0.00012705158,0.00007760546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012384048,0.0000664795,0.04065639,0.000032940185,0.000018381003,0.000022610013,0.000093453804,0.000045791403,0.94092125,0.00022736711,0.00007981759,0.017711695],"study_design_scores_gemma":[0.0010054145,0.00046630672,0.0060585616,0.00003370854,0.000003226052,0.000008132719,0.00013761611,0.000026543099,0.84876,0.00032185126,0.14281677,0.00036185374],"about_ca_topic_score_codex":0.00005563517,"about_ca_topic_score_gemma":0.00007892554,"teacher_disagreement_score":0.6934432,"about_ca_system_score_codex":0.000045090223,"about_ca_system_score_gemma":0.00008131983,"threshold_uncertainty_score":0.9999777},"labels":[],"label_agreement":null},{"id":"W2919771635","doi":"10.1007/978-1-4939-9012-2_31","title":"Three-Dimensional Assessment of Crown Size and Eruption Space for Developing Third Molars: Data Collection Techniques Based on Cone-Beam Computed Tomography (CBCT)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Dental Radiography and Imaging","field":"Dentistry","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Molar; Cone beam computed tomography; Crown (dentistry); Impaction; Impacted tooth; Dentistry; Computed tomography; Orthodontics; Tooth eruption; Medicine; Radiology","score_opus":0.031629743685965266,"score_gpt":0.395076177922525,"score_spread":0.3634464342365597,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919771635","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1801135,0.00018152491,0.8183317,0.00007285928,0.00034519212,0.0006768472,0.000045721168,0.00004871423,0.00018394693],"genre_scores_gemma":[0.15764548,0.000005527133,0.8418226,0.00031108665,0.000010777856,0.000041568546,0.0001390458,0.000017674354,0.0000061997557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99817896,0.0005141076,0.00037040835,0.00057982013,0.00012671362,0.00022997161],"domain_scores_gemma":[0.9983136,0.0008647409,0.0002015608,0.0004928492,0.000095589516,0.000031632848],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017659611,0.00018812,0.0003860881,0.0004453345,0.00006168067,0.000026673797,0.00025572226,0.0001993805,0.000011764018],"category_scores_gemma":[0.00021854759,0.00018558114,0.000102697406,0.00058907474,0.0001321174,0.0000821268,0.0001719791,0.00021002327,5.2929647e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021148894,0.00012440386,0.089585386,0.00011626089,0.000094454736,0.000009306572,0.000008012856,0.00007186996,0.9002499,0.0031635987,0.00008628712,0.006279053],"study_design_scores_gemma":[0.002832536,0.00093992444,0.22835898,0.00039736668,0.00008396455,0.000053882075,0.00003395362,0.12371644,0.63115066,0.010740336,0.0011283476,0.0005635808],"about_ca_topic_score_codex":0.00009565622,"about_ca_topic_score_gemma":0.00003785675,"teacher_disagreement_score":0.26909918,"about_ca_system_score_codex":0.00005576153,"about_ca_system_score_gemma":0.00007013424,"threshold_uncertainty_score":0.7567779},"labels":[],"label_agreement":null},{"id":"W2919927751","doi":"10.1007/978-1-4939-9012-2_41","title":"Saliva and Gingival Crevicular Fluid (GCF) Collection for Biomarker Screening","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salivary Gland Disorders and Functions","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Saliva; Medicine; Biomarker; Dentistry; Pathological; Biological fluids; Biomarker discovery; Pathology; Internal medicine; Biology; Chemistry; Proteomics; Chromatography","score_opus":0.03509644560685113,"score_gpt":0.40257443496266904,"score_spread":0.3674779893558179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2919927751","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.113525555,0.0020665813,0.8815313,0.0005495958,0.0002569139,0.0006384236,0.0000037749894,0.000032225784,0.0013956141],"genre_scores_gemma":[0.043708477,0.0000909836,0.95449185,0.0010514453,0.00004454804,0.00008748793,0.00006649843,0.000027481921,0.00043123655],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99889404,0.00028583786,0.00021222055,0.00033292183,0.00004463074,0.0002303549],"domain_scores_gemma":[0.9994209,0.00022496648,0.000042284923,0.00020444008,0.00004816814,0.000059267462],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075914303,0.00012794136,0.0003181846,0.00021307518,0.000051490006,0.000008659426,0.000040506886,0.00017442441,0.000087273045],"category_scores_gemma":[0.0003574427,0.00010935668,0.00010222605,0.00026791514,0.000054255528,0.00001942753,0.000038493454,0.000100225036,0.0000034181678],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000519972,0.000076523145,0.14734447,0.00009534735,0.00013473953,0.000011555109,0.000068665344,0.000015709122,0.820267,0.002965324,0.00030878372,0.028191868],"study_design_scores_gemma":[0.038808648,0.007661115,0.29168823,0.0005700761,0.0011700866,0.001197223,0.0016740792,0.10124659,0.15876147,0.041126296,0.35380092,0.0022952578],"about_ca_topic_score_codex":0.00006012817,"about_ca_topic_score_gemma":0.0000028362792,"teacher_disagreement_score":0.6615056,"about_ca_system_score_codex":0.000018592078,"about_ca_system_score_gemma":0.000029809933,"threshold_uncertainty_score":0.44594362},"labels":[],"label_agreement":null},{"id":"W2920375176","doi":"10.1007/978-1-4939-9012-2_33","title":"In Vitro Caries Models for the Assessment of Novel Restorative Materials","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Dental materials and restorations","field":"Dentistry","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Restorative dentistry; Dentistry; Enamel paint; Biofilm; Materials science; Medicine; Biology","score_opus":0.05406888612399836,"score_gpt":0.45571321382304325,"score_spread":0.4016443276990449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920375176","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.282727,0.0001099374,0.7147938,0.0001283344,0.0013754998,0.00052729674,0.00013637186,0.0000045454635,0.00019718746],"genre_scores_gemma":[0.46803916,0.0000074736668,0.5315347,0.00009307429,0.000021894819,0.00015020536,0.000028831395,0.000011330904,0.00011339029],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985758,0.0006448136,0.0003677966,0.00019928504,0.00005433294,0.00015795344],"domain_scores_gemma":[0.9991613,0.0003727131,0.00013840653,0.0002706041,0.00004515563,0.00001183249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012349254,0.0001002491,0.00032248936,0.00008287233,0.000022944567,0.000019855053,0.00019533034,0.00013381128,0.000049738614],"category_scores_gemma":[0.00012064847,0.000069021386,0.00005032979,0.000107479485,0.00009614301,0.000048621154,0.000097597236,0.000069762784,0.0000020806394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062414154,0.000055366323,0.00013707565,0.000022444414,0.000020729976,0.0000027229441,0.000074612966,0.001137058,0.93902767,0.05935641,0.000010308731,0.00009320419],"study_design_scores_gemma":[0.00080419163,0.00006120351,0.0010263439,0.000012190317,0.000010571529,0.0000057016864,0.00014452658,0.0033012105,0.9782495,0.015678234,0.0006105932,0.00009572873],"about_ca_topic_score_codex":0.0002836452,"about_ca_topic_score_gemma":0.000048432386,"teacher_disagreement_score":0.18531214,"about_ca_system_score_codex":0.000042477594,"about_ca_system_score_gemma":0.00004776484,"threshold_uncertainty_score":0.28146103},"labels":[],"label_agreement":null},{"id":"W2920546862","doi":"10.1007/978-1-4939-9012-2_35","title":"In Vivo Rodent Models for Studying Dental Caries and Pulp Disease","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Oral microbiology and periodontitis research","field":"Dentistry","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Streptococcus sobrinus; Pulp (tooth); Streptococcus mutans; Dentistry; Biofilm; Oral microbiology; Carious lesion; Pulpitis; Medicine; In vivo; Lesion; Microbiology; Enamel paint; Biology; Pathology; Bacteria; Biotechnology","score_opus":0.04374410677468087,"score_gpt":0.42858023068354795,"score_spread":0.38483612390886707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920546862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.821075,0.0021578388,0.1755131,0.00008647815,0.0004145023,0.00054990314,0.000069767855,0.0000091483535,0.000124264],"genre_scores_gemma":[0.84483045,0.00006048064,0.15395519,0.00026289595,0.000027145763,0.00014218914,0.00002623988,0.00002160854,0.00067381817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979405,0.0009821831,0.0002376602,0.00043642096,0.000038928305,0.00036430583],"domain_scores_gemma":[0.9994082,0.00023963214,0.000036630645,0.00022818995,0.000026698126,0.00006064682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00097456685,0.00013445543,0.00031179358,0.00017340352,0.00004029192,0.000025001664,0.00018887514,0.00018854426,0.00014785922],"category_scores_gemma":[0.00017526218,0.00012767702,0.00006462771,0.00011835514,0.00014745387,0.0000670311,0.0002301958,0.00021341603,0.000010452854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022741983,0.000054681826,0.32409054,0.000057821322,0.00002635557,0.00010847748,0.00012682701,0.00017683113,0.6673797,0.0062654424,0.00002557537,0.0014603424],"study_design_scores_gemma":[0.014350449,0.0012966688,0.13314192,0.00023201527,0.00011574868,0.0002862339,0.0017438487,0.022784835,0.5702973,0.23834209,0.015209949,0.0021989355],"about_ca_topic_score_codex":0.00027173528,"about_ca_topic_score_gemma":0.00043754771,"teacher_disagreement_score":0.23207666,"about_ca_system_score_codex":0.00004451509,"about_ca_system_score_gemma":0.000037022943,"threshold_uncertainty_score":0.52065176},"labels":[],"label_agreement":null},{"id":"W2920886719","doi":"10.1007/978-1-4939-9154-9_23","title":"High-Throughput Screening for Inhibitors of Wall Teichoic Acid Biosynthesis in Staphylococcus aureus","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research; Canada Research Chairs","keywords":"Teichoic acid; Staphylococcus aureus; Antibiotics; Microbiology; Virulence; Antibiotic resistance; Pathogen; Biology; Bacteria; Gene; Genetics","score_opus":0.0225307434069384,"score_gpt":0.372695912771949,"score_spread":0.35016516936501063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920886719","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5528466,0.00079154724,0.44439787,0.00036316778,0.0002215486,0.001153888,0.000025917981,0.000025481839,0.00017396778],"genre_scores_gemma":[0.33636758,0.000036405872,0.6629898,0.00038166484,0.000036279067,0.00006852761,0.000020969846,0.000044832355,0.000053935073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99665755,0.000992778,0.00088703405,0.0006993464,0.00013197429,0.00063131267],"domain_scores_gemma":[0.9977575,0.00107188,0.00028908742,0.00066771684,0.00013176883,0.00008204682],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024103243,0.00031927714,0.0011013828,0.000644225,0.000021656453,0.000005108051,0.0002898865,0.00057106843,0.00006595133],"category_scores_gemma":[0.0020861786,0.00029555307,0.00028320734,0.0007569368,0.00024163023,0.000039014467,0.00012803692,0.00043541123,0.000006964071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00054954947,0.00012633736,0.047443833,0.00019758298,0.000076040444,0.000024660447,0.00011639772,0.00008561786,0.9338174,0.0012461996,0.00003263807,0.016283756],"study_design_scores_gemma":[0.0025572032,0.00056727073,0.007319022,0.0003270445,0.00005333064,0.0000030453584,0.00013742692,0.00019034906,0.98328143,0.0030357675,0.002227803,0.00030029615],"about_ca_topic_score_codex":0.0002682727,"about_ca_topic_score_gemma":0.00006547323,"teacher_disagreement_score":0.21859194,"about_ca_system_score_codex":0.0001529578,"about_ca_system_score_gemma":0.00013566812,"threshold_uncertainty_score":0.99994963},"labels":[],"label_agreement":null},{"id":"W2920916473","doi":"10.1007/978-1-4939-9154-9_15","title":"Enzymatic Synthesis of Repeating Unit Oligosaccharides of Escherichia coli O104","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Glycosyltransferase; Transferase; Escherichia coli; Biochemistry; Sialyltransferase; Enzyme; Bloody diarrhea; Acetylglucosamine; Chemistry; Antigen; Polysaccharide; Pathogen; Microbiology; Biology; Diarrhea; Gene; Medicine; Immunology","score_opus":0.02317577121609967,"score_gpt":0.38170815664812097,"score_spread":0.3585323854320213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920916473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85364836,0.00048092983,0.14295341,0.00004439518,0.00007658518,0.0003400559,0.000010800801,0.0000053829754,0.002440097],"genre_scores_gemma":[0.6452232,0.00004960088,0.35442242,0.00005697605,0.000011416433,0.000037712525,0.00001739298,0.000017728022,0.00016353698],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976405,0.0011401521,0.00050198875,0.00034391927,0.00010843608,0.00026504078],"domain_scores_gemma":[0.9988707,0.00016936954,0.00022080538,0.0005535196,0.00013886463,0.00004676909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015258093,0.00014866723,0.0003909803,0.00017810462,0.000016946266,0.0000044353474,0.00031424148,0.0002551152,0.00012220646],"category_scores_gemma":[0.0019357459,0.00014052523,0.00011944379,0.00031615037,0.00014647038,0.0000024683895,0.00019373585,0.00014162187,0.00000620947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006980657,0.000052609026,0.011761445,0.00011453235,0.00005052004,0.0000017451636,0.000032968295,0.00011865054,0.9796616,0.0013738103,0.000005330329,0.0067569925],"study_design_scores_gemma":[0.00032998316,0.0002643099,0.0014425109,0.0000455783,0.000009872013,0.000003009767,0.000089935405,0.0004990734,0.9954729,0.00078292686,0.0009269034,0.00013298921],"about_ca_topic_score_codex":0.00010731898,"about_ca_topic_score_gemma":0.000010790798,"teacher_disagreement_score":0.211469,"about_ca_system_score_codex":0.00000995776,"about_ca_system_score_gemma":0.00009503004,"threshold_uncertainty_score":0.57304525},"labels":[],"label_agreement":null},{"id":"W2920916964","doi":"10.1007/978-1-4939-9154-9_12","title":"Utilization of Fluorescently Tagged Synthetic Acceptor Molecules for In Vitro Characterization of a Dual-Domain Glycosyltransferase Enzyme, KpsC, from Escherichia coli","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Glycomics Network; Canadian Institutes of Health Research; University of Alberta","keywords":"Glycosyltransferase; Escherichia coli; Enzyme; Biochemistry; Chemistry; In vitro; Acceptor; Fluorescence; Combinatorial chemistry; Gene","score_opus":0.01988356784431369,"score_gpt":0.34904276517559785,"score_spread":0.3291591973312842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920916964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57021177,0.00017428093,0.42835325,0.000043060707,0.00007548067,0.0009444456,0.00015425173,0.0000041209864,0.000039340703],"genre_scores_gemma":[0.76412475,0.00009232525,0.23410459,0.00009417087,0.000022307484,0.0002034744,0.0012898397,0.00003642384,0.000032094053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971432,0.0011786415,0.00065685157,0.00055112975,0.00013376097,0.0003363894],"domain_scores_gemma":[0.9990064,0.00011029665,0.00020244924,0.00045820352,0.0001709039,0.000051739346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009152589,0.00022237895,0.00047986806,0.0002725569,0.000018852226,0.000008623159,0.00025305946,0.00038896452,0.00008743792],"category_scores_gemma":[0.000532712,0.00022781553,0.00014776317,0.00037513126,0.00012765972,0.0000071370296,0.00009136205,0.00014220584,0.0000023393854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013398746,0.00019799902,0.0012902346,0.00008755368,0.000044357752,0.0000021216897,0.000090219175,0.000052491065,0.98996764,0.00051411055,0.0000017609018,0.006411616],"study_design_scores_gemma":[0.0020609945,0.00036900648,0.0018004131,0.00003426444,0.000011393672,8.29192e-7,0.000050895374,0.001603091,0.99187,0.0007247437,0.0012724543,0.00020190899],"about_ca_topic_score_codex":0.0000851585,"about_ca_topic_score_gemma":0.000023401157,"teacher_disagreement_score":0.19424866,"about_ca_system_score_codex":0.00002915744,"about_ca_system_score_gemma":0.000119314216,"threshold_uncertainty_score":0.9290047},"labels":[],"label_agreement":null},{"id":"W2920934218","doi":"10.1007/978-1-4939-9154-9_20","title":"Glycosyltransferase-Coupled Assays for 4-Epimerase WbpP from Pseudomonas aeruginosa","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glycosyltransferase; Nucleotide sugar; Biochemistry; Pseudomonas aeruginosa; Chemistry; Substrate specificity; Enzyme; Gene; Substrate (aquarium); Biology; Bacteria; Genetics","score_opus":0.01882506968854447,"score_gpt":0.38468177306372286,"score_spread":0.3658567033751784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920934218","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3474256,0.0007771279,0.6494249,0.00028664293,0.00027902107,0.0009562858,0.00008048951,0.000019782663,0.0007501433],"genre_scores_gemma":[0.35058448,0.000113735405,0.6460977,0.00089830114,0.00015830329,0.00037182483,0.0010141539,0.000073824434,0.0006876789],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968544,0.00095567515,0.0004624795,0.0009412545,0.00014626457,0.0006399008],"domain_scores_gemma":[0.99857926,0.0002498079,0.000084248,0.0007928473,0.0001478151,0.00014599702],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013643438,0.0003204047,0.0004496105,0.00019304194,0.000060916693,0.000029827184,0.0004666837,0.0005476961,0.00034223404],"category_scores_gemma":[0.00069956464,0.00031292782,0.0002626698,0.00024567376,0.00012070444,0.000005211057,0.00014634481,0.00028029588,0.00006025804],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044171876,0.0000929694,0.004001006,0.000020673328,0.00008491236,0.000009630393,0.00002311056,0.00012738336,0.9836724,0.0014845324,0.000094409224,0.009947259],"study_design_scores_gemma":[0.0029240416,0.00059799815,0.000602387,0.000014496644,0.000018384417,0.000007913724,0.0000319498,0.0026740748,0.9426394,0.0044347188,0.04562879,0.00042586125],"about_ca_topic_score_codex":0.00026528517,"about_ca_topic_score_gemma":0.000081227474,"teacher_disagreement_score":0.045534384,"about_ca_system_score_codex":0.00003566979,"about_ca_system_score_gemma":0.00013649964,"threshold_uncertainty_score":0.9999323},"labels":[],"label_agreement":null},{"id":"W2920966218","doi":"10.1007/978-1-4939-9164-8_5","title":"A Standardized and Reproducible Proteomics Protocol for Bottom-Up Quantitative Analysis of Protein Samples Using SP3 and Mass Spectrometry","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":38,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Workflow; Proteomics; Proteome; Shotgun proteomics; Computer science; Protocol (science); Quantitative proteomics; Mass spectrometry; Computational biology; Data science; Chemistry; Bioinformatics; Chromatography; Database; Biology; Medicine","score_opus":0.05613645446143414,"score_gpt":0.4672338451093007,"score_spread":0.41109739064786655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2920966218","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17306158,0.000048321446,0.79649657,0.000029354671,0.000003475887,0.030205358,0.00008028471,0.000020549196,0.00005450045],"genre_scores_gemma":[0.0012590381,0.000004637266,0.93592024,0.000010165406,0.0000057196553,0.06273468,0.000015460693,0.000021526632,0.000028543749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852556,0.00016885083,0.00040283846,0.0006358017,0.000052601365,0.00021432241],"domain_scores_gemma":[0.998898,0.00018079889,0.00030093186,0.0004926427,0.00009413042,0.000033440912],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011926309,0.000163188,0.00057090586,0.00026962417,0.000037391157,0.000012443297,0.0001234461,0.00017736471,0.000026989543],"category_scores_gemma":[0.0004975236,0.00015369743,0.000092860406,0.00051620166,0.00014929548,0.000028724913,0.00009365691,0.00017501591,5.5472466e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026719185,0.000024185741,0.0037535797,0.00023173698,0.00016102548,3.5905666e-7,0.000043029217,0.00004648027,0.977593,0.0171362,1.6392623e-7,0.00074302027],"study_design_scores_gemma":[0.00079096475,0.00012266329,0.000027054162,0.000042546188,0.000083378334,0.0000014859638,0.000066767876,0.0054905345,0.9095484,0.08336708,0.00030028672,0.00015883913],"about_ca_topic_score_codex":0.000037301434,"about_ca_topic_score_gemma":0.0000022402296,"teacher_disagreement_score":0.17180254,"about_ca_system_score_codex":0.000050512816,"about_ca_system_score_gemma":0.000049144794,"threshold_uncertainty_score":0.6267599},"labels":[],"label_agreement":null},{"id":"W2921148887","doi":"10.1007/978-1-4939-9202-7_11","title":"Modeling Neisseria meningitidis Infection in Mice: Methods and Logistical Considerations for Nasal Colonization and Invasive Disease","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Neisseria meningitidis; Meningococcal disease; Colonization; Disease; Immunology; Sepsis; Carriage; Immune system; Neisseriaceae; Medicine; Meningococcal vaccine; Biology; Microbiology; Intensive care medicine; Antibiotics; Bacteria; Internal medicine; Immunization","score_opus":0.037740566379697436,"score_gpt":0.40077501949383065,"score_spread":0.36303445311413324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921148887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53075427,0.0005305951,0.46790588,0.00012326866,0.00033011462,0.00031841657,0.00000971208,0.000012914208,0.00001479739],"genre_scores_gemma":[0.6744034,0.00012505396,0.3251711,0.00008599587,0.000012295783,0.0001041687,0.00007009188,0.000011636624,0.000016205619],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977419,0.0013940874,0.00029694883,0.0003541757,0.0000040908803,0.0002088269],"domain_scores_gemma":[0.9987715,0.00097470556,0.000053088996,0.000111091475,0.00006509844,0.000024542493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008698818,0.00013734354,0.00029504616,0.000203609,0.00007973191,0.000019822493,0.000029552522,0.00027773363,0.00005301642],"category_scores_gemma":[0.0020996265,0.00013333804,0.00003364114,0.00012311155,0.000094188115,0.000054174136,0.000068386784,0.00016036283,0.0000019847332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117992844,0.000039245344,0.025444753,0.000029767813,0.00003082881,6.592899e-7,0.000083629704,0.00051121716,0.9515052,0.020872975,0.000002860945,0.0013608779],"study_design_scores_gemma":[0.010134735,0.0015221738,0.05880304,0.00017216445,0.0002944362,0.00023019244,0.00026754843,0.0616571,0.5587219,0.3053852,0.0015291425,0.00128239],"about_ca_topic_score_codex":0.0002758456,"about_ca_topic_score_gemma":0.00020091885,"teacher_disagreement_score":0.3927833,"about_ca_system_score_codex":0.000027843194,"about_ca_system_score_gemma":0.000057209498,"threshold_uncertainty_score":0.5437367},"labels":[],"label_agreement":null},{"id":"W2921179630","doi":"10.1007/978-1-4939-9095-5_7","title":"Mass Spectrometry-Based Proteomics to Define Intracellular Collagen Interactomes","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Cancer Institute; National Institute of Environmental Health Sciences; Canadian Institutes of Health Research","keywords":"Interactome; Stable isotope labeling by amino acids in cell culture; Proteomics; Computational biology; Immunoprecipitation; Chemistry; Mass spectrometry; Protein–protein interaction; Isobaric labeling; Quantitative proteomics; Biology; Cell biology; Biochemistry; Gene; Chromatography","score_opus":0.01294691666332883,"score_gpt":0.36866605398646085,"score_spread":0.35571913732313204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921179630","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11701049,0.00009622267,0.87868917,0.00041980215,0.00004210127,0.00054936385,0.00001880055,0.000090532005,0.0030834894],"genre_scores_gemma":[0.03291769,0.000009760647,0.9658566,0.0004245686,0.000024393703,0.00043610792,0.00004408493,0.000041458832,0.00024535242],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99857175,0.00013996646,0.0003476332,0.0005177966,0.00006109539,0.00036178043],"domain_scores_gemma":[0.9989327,0.00015893717,0.00011463502,0.0006672931,0.000046413716,0.00008001673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048788643,0.00020881143,0.00034399936,0.00020325834,0.000025726018,0.000016717238,0.000418374,0.00024694265,0.0005464347],"category_scores_gemma":[0.00022666424,0.00021164093,0.00009018225,0.0004393792,0.000046804962,0.00001787351,0.00012514928,0.0002560864,0.00005313554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003903836,0.000039922572,0.001715432,0.000030105162,0.000012549463,0.000006885389,0.00001352827,0.0002499011,0.98758596,0.008599444,0.0000063960642,0.0017008375],"study_design_scores_gemma":[0.0002972974,0.000064679,0.000008749442,0.00002230648,0.000006488919,0.000003829721,0.0000149819625,0.00089354813,0.963877,0.028652621,0.005918455,0.00024003875],"about_ca_topic_score_codex":0.00001516574,"about_ca_topic_score_gemma":0.000001721535,"teacher_disagreement_score":0.08716739,"about_ca_system_score_codex":0.00014621163,"about_ca_system_score_gemma":0.000046960467,"threshold_uncertainty_score":0.8630467},"labels":[],"label_agreement":null},{"id":"W2921227343","doi":"10.1007/978-1-4939-9154-9_9","title":"Chemical Modification of the N-Acetyl Moieties of Hyaluronic Acid from Streptococcus equi for Studies in Cytokine Production","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Proteoglycans and glycosaminoglycans research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Hyaluronic acid; Acetylation; Chemistry; Yield (engineering); Polymer chemistry; Polymer; Hydrazine (antidepressant); Proinflammatory cytokine; Organic chemistry; Streptococcus equi; Biochemistry; Bacteria; Materials science; Biology; Inflammation; Immunology","score_opus":0.06025740690464062,"score_gpt":0.43959341948417624,"score_spread":0.37933601257953564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921227343","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9517697,0.002859522,0.043870047,0.00019271833,0.00019202716,0.0010201355,0.000047558515,0.0000028389736,0.000045452944],"genre_scores_gemma":[0.9066221,0.00019376734,0.09267735,0.000023456658,0.000050552197,0.00027616406,0.00006839546,0.000016386799,0.00007179318],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982411,0.00055244437,0.00041643385,0.0004517516,0.00008960661,0.00024864296],"domain_scores_gemma":[0.99899876,0.00006845832,0.0001687347,0.00059591915,0.00014957234,0.000018530605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093784695,0.0001440293,0.00034504262,0.00009031355,0.000013975413,0.0000023278853,0.00034844334,0.00022404059,0.0000045781567],"category_scores_gemma":[0.00084216445,0.00011047028,0.000118938944,0.00021921055,0.0003213451,0.000003061418,0.00024165916,0.0001438771,3.8494997e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021934617,0.000057484875,0.0051034465,0.00008540366,0.00006191678,2.0219822e-7,0.00009730094,0.00024650586,0.98653245,0.00028277954,0.000010032255,0.0073031173],"study_design_scores_gemma":[0.00069026655,0.0003267564,0.00060706324,0.000044348406,0.000010678108,0.0000010060351,0.00017952254,0.00021921704,0.99383837,0.0034732933,0.0005014728,0.00010801839],"about_ca_topic_score_codex":0.00007941867,"about_ca_topic_score_gemma":0.000031137657,"teacher_disagreement_score":0.0488073,"about_ca_system_score_codex":0.000039351395,"about_ca_system_score_gemma":0.0001078368,"threshold_uncertainty_score":0.45048475},"labels":[],"label_agreement":null},{"id":"W2921238327","doi":"10.1007/978-1-4939-9154-9_18","title":"Glycosyltransferase Activity Assay Using Colorimetric Methods","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Glycosyltransferase; Glycoconjugate; Biochemistry; Chemistry; Biosynthesis; Glycosyl; Glycosidic bond; Galactosyltransferase; Polysaccharide; Residue (chemistry); Monosaccharide; Enzyme; Glycosylation; Nucleotide sugar","score_opus":0.035824834541301094,"score_gpt":0.40907222901935075,"score_spread":0.37324739447804967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921238327","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4717388,0.0002695069,0.5185981,0.00002692002,0.00017211387,0.000073924464,0.000010751316,0.000039879305,0.009070035],"genre_scores_gemma":[0.2548378,0.000020124175,0.7447284,0.00007409556,0.000046671903,0.000022759654,0.000011215974,0.000038093778,0.00022083333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964596,0.0018191531,0.00037420308,0.00071554247,0.00010206921,0.00052943185],"domain_scores_gemma":[0.9971499,0.0018590341,0.000113758135,0.0007190926,0.000049303508,0.00010890453],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0028471851,0.00031435228,0.0006571518,0.00021170512,0.000045545126,0.000021788002,0.0003871504,0.0006086996,0.0015668726],"category_scores_gemma":[0.0013667169,0.00031798013,0.00024961095,0.00072998175,0.00011356312,0.000044710487,0.00012614217,0.00054642896,0.000014075631],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007880847,0.000087059976,0.0019182434,0.000087000924,0.000067866924,0.00003036363,0.000028410908,0.00008163088,0.94855326,0.00025574345,0.0000010548739,0.04881054],"study_design_scores_gemma":[0.000467254,0.000022596081,0.00003601539,0.000021147811,0.000047747697,0.000026751091,0.000032249543,0.0043188445,0.9909724,0.0015202746,0.002178029,0.0003566931],"about_ca_topic_score_codex":0.00015630541,"about_ca_topic_score_gemma":0.0000023682494,"teacher_disagreement_score":0.22613032,"about_ca_system_score_codex":0.00019651302,"about_ca_system_score_gemma":0.0000916115,"threshold_uncertainty_score":0.9999272},"labels":[],"label_agreement":null},{"id":"W2921259145","doi":"10.1007/978-1-4939-9148-8_20","title":"Apolipoprotein A1 and Fibronectin Fragments as Markers of Cure for the Chagas Disease","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Benznidazole; Nifurtimox; Medicine; Chagas disease; Disease; Trypanosoma cruzi; Population; Immunology; Internal medicine","score_opus":0.02241124019527959,"score_gpt":0.4366660963812336,"score_spread":0.41425485618595403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921259145","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50316644,0.0037297541,0.47890997,0.009302777,0.00012992583,0.0032683902,0.000060067745,0.000017633474,0.0014150196],"genre_scores_gemma":[0.3685381,0.0004280036,0.6275894,0.0010778018,0.00006275987,0.0005816281,0.000055271892,0.000036742265,0.0016302633],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99906147,0.00027170876,0.00016185301,0.00021768238,0.00006804346,0.00021923536],"domain_scores_gemma":[0.99903655,0.00039240334,0.000048009624,0.00038154025,0.000045566772,0.000095930816],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019820074,0.00008263908,0.0001954284,0.00008869016,0.000028890936,0.000004238137,0.00011153524,0.00007476583,0.00012148402],"category_scores_gemma":[0.0010422138,0.000055829685,0.00006751542,0.00014134584,0.00014757291,0.000011253518,0.00008168284,0.000131734,0.00000518266],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052315876,0.00005196593,0.007559763,0.00010435623,0.00006777953,0.0000024516676,0.000029929344,0.00000188737,0.94115806,0.009101472,0.000082701095,0.041316483],"study_design_scores_gemma":[0.0062297024,0.0032225535,0.5324223,0.00017931602,0.00015864367,0.00004960709,0.00045528336,0.0021234883,0.31150532,0.038156934,0.10511969,0.00037719362],"about_ca_topic_score_codex":0.00008002866,"about_ca_topic_score_gemma":0.000002796532,"teacher_disagreement_score":0.62965274,"about_ca_system_score_codex":0.000021796977,"about_ca_system_score_gemma":0.00007575722,"threshold_uncertainty_score":0.22766684},"labels":[],"label_agreement":null},{"id":"W2921332189","doi":"10.1007/978-1-4939-9154-9_16","title":"Sulfhydryl Labeling as a Tool to Investigate the Topology of Membrane Proteins Involved in Lipopolysaccharide Biosynthesis","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Cystic Fibrosis Canada; Canadian Institutes of Health Research; Department for Employment and Learning, Northern Ireland","keywords":"Cysteine; Amino acid; Biogenesis; Membrane topology; Biochemistry; Transmembrane protein; Membrane protein; Chemistry; Integral membrane protein; Topology (electrical circuits); Peripheral membrane protein; Transmembrane domain; Biology; Membrane; Gene","score_opus":0.01772611755996396,"score_gpt":0.32844294874468993,"score_spread":0.310716831184726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921332189","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9276835,0.00073526986,0.068778135,0.0009861318,0.00023664869,0.001217629,0.000009180288,0.0000121650255,0.00034138738],"genre_scores_gemma":[0.6458559,0.000099200995,0.35160553,0.0018537872,0.000048932252,0.00030214182,0.000014944555,0.000048294005,0.00017128074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959587,0.0020281493,0.00064800686,0.000713996,0.00011422525,0.0005369424],"domain_scores_gemma":[0.99849796,0.00025757024,0.00018907641,0.00090700766,0.00006803556,0.000080373866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002916233,0.00029914165,0.00055644,0.0002742786,0.000035510333,0.000012961377,0.0007077199,0.00048206243,0.000096590695],"category_scores_gemma":[0.0027242105,0.00023856458,0.00014974824,0.000376804,0.00019929532,0.000004848648,0.00036920246,0.00023017559,0.000023169549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015630336,0.000050933508,0.0022118539,0.000030264595,0.000049324568,0.000008074296,0.00011354452,0.00014112826,0.9826588,0.00692577,0.0000026908929,0.0076513253],"study_design_scores_gemma":[0.00045164666,0.00047318378,0.00011950082,0.000064137406,0.00001440587,0.000008297263,0.00012064294,0.000058185036,0.987375,0.009283198,0.0017390233,0.00029276224],"about_ca_topic_score_codex":0.0003961611,"about_ca_topic_score_gemma":0.00018550719,"teacher_disagreement_score":0.28282738,"about_ca_system_score_codex":0.0000268724,"about_ca_system_score_gemma":0.0001406213,"threshold_uncertainty_score":0.9728381},"labels":[],"label_agreement":null},{"id":"W2921397996","doi":"10.1007/978-1-4939-9154-9_13","title":"Synthesis of Phenoxyundecyl Diphosphate Disaccharides for Studies of the Biosynthesis of O Antigenic Polysaccharides in Enteric Bacteria","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Chemistry; Glycosyltransferase; Residue (chemistry); Disaccharide; Biosynthesis; Lipid II; Biochemistry; Stereochemistry; Uridine diphosphate glucose; Moiety; Polysaccharide; Enzyme","score_opus":0.029593971742871452,"score_gpt":0.3562509786367736,"score_spread":0.32665700689390215,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921397996","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.995053,0.0019652839,0.002246401,0.000066857196,0.0001387895,0.00019828825,0.00010746222,0.000007653644,0.00021628772],"genre_scores_gemma":[0.952136,0.0003167016,0.047378205,0.000013713077,0.0000105566905,0.00007600092,0.0000026399762,0.000024642752,0.00004157934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794555,0.0003558527,0.00089830917,0.00040293482,0.000093806106,0.0003035695],"domain_scores_gemma":[0.99609244,0.0025673732,0.00053724565,0.0006914929,0.000086446984,0.000024982277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00110392,0.00024348655,0.001033988,0.0001243636,0.000017871713,0.000003490589,0.000583438,0.00022957579,0.00018429148],"category_scores_gemma":[0.0026518493,0.00018458963,0.00036965066,0.00034790454,0.0003915699,0.000028527937,0.00022804449,0.00011436559,4.1695841e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014377905,0.00011552336,0.03491842,0.0009222523,0.00022248006,8.434044e-7,0.0002480451,0.0000142047675,0.9570907,0.0002980646,6.8230224e-7,0.0060250033],"study_design_scores_gemma":[0.0002757319,0.000025742835,0.0013257249,0.0003708684,0.00007986641,0.0000016635175,0.00064440677,0.00008085389,0.9944271,0.0025793358,0.00002388496,0.00016482429],"about_ca_topic_score_codex":0.000105076164,"about_ca_topic_score_gemma":0.000011617542,"teacher_disagreement_score":0.045131806,"about_ca_system_score_codex":0.000051647123,"about_ca_system_score_gemma":0.000050533647,"threshold_uncertainty_score":0.7527347},"labels":[],"label_agreement":null},{"id":"W2921570698","doi":"10.1007/978-1-4939-9213-3_14","title":"Triplet-Repeat Primed PCR and Capillary Electrophoresis for Characterizing the Fragile X Mental Retardation 1 CGG Repeat Hyperexpansions","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genetics and Neurodevelopmental Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Fragile X syndrome; FMR1; Capillary electrophoresis; Fragile x; Ataxia; Amplicon; Genetics; Molecular biology; Polymerase chain reaction; Trinucleotide repeat expansion; Biology; Gene","score_opus":0.018019715103350487,"score_gpt":0.30757525442501404,"score_spread":0.28955553932166356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921570698","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5938493,0.08604621,0.22666478,0.0063377344,0.0053924434,0.01697828,0.0013414025,0.00014779273,0.06324207],"genre_scores_gemma":[0.04880376,0.067024216,0.7149776,0.013757403,0.00051986217,0.0011316894,0.017054686,0.0011031007,0.13562766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769217,0.000321133,0.00049171667,0.0009768243,0.00010438656,0.00041376613],"domain_scores_gemma":[0.99887776,0.000090668545,0.000241561,0.00065129873,0.00007033819,0.000068379304],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00062090985,0.00046074364,0.00049690704,0.00013753395,0.00013843991,0.000025879679,0.0003225328,0.00066857703,0.000031622458],"category_scores_gemma":[0.000176354,0.00038776145,0.00022395856,0.000042666066,0.00019358734,0.0000025602535,0.00033557424,0.00030807077,0.0000041390044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013180787,0.000015840435,0.000069016976,0.00003250209,0.0001314511,0.0000033013187,0.000045762772,0.0000015363763,0.98890567,0.0010776176,0.00035720813,0.009228288],"study_design_scores_gemma":[0.0008904579,0.00060816895,0.00041444576,0.000043889726,0.000093088405,0.000043834527,0.000026450885,0.00004469485,0.6204308,0.0029562912,0.37384406,0.00060377305],"about_ca_topic_score_codex":0.0000106529915,"about_ca_topic_score_gemma":0.000016606402,"teacher_disagreement_score":0.5450455,"about_ca_system_score_codex":0.00003943116,"about_ca_system_score_gemma":0.00013755682,"threshold_uncertainty_score":0.9998574},"labels":[],"label_agreement":null},{"id":"W2921937790","doi":"10.1007/978-1-4939-9154-9_17","title":"Assay Methods for the Glycosyltransferases Involved in Synthesis of Bacterial Polysaccharides","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Canadian Glycomics Network","keywords":"Glycosyltransferase; Glycan; Glycoconjugate; Computational biology; Biochemistry; Glycobiology; Biology; Enzyme; Chemistry; Glycoprotein","score_opus":0.02760675042790861,"score_gpt":0.4114653511144154,"score_spread":0.3838586006865068,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2921937790","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18533619,0.0013296503,0.8116366,0.000241972,0.00025559805,0.0009598553,0.000026913818,0.000005889041,0.00020729414],"genre_scores_gemma":[0.30742013,0.00022241718,0.69157845,0.00016832644,0.0000512818,0.00039390486,0.00005022595,0.000033182543,0.00008205995],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99580854,0.002746664,0.00048316433,0.00048427534,0.000078738216,0.0003985938],"domain_scores_gemma":[0.9978253,0.0013614707,0.00009572878,0.00057105935,0.00010040345,0.0000460356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0047501065,0.00019768384,0.0004252896,0.00021416698,0.000030776293,0.000013739266,0.00047564172,0.00033663856,0.00013019289],"category_scores_gemma":[0.0026710343,0.00015119882,0.00019309868,0.00029474482,0.00016239655,0.000003937829,0.00013436934,0.00017829565,0.0000025019988],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004171866,0.00005718893,0.003061799,0.000038515915,0.000054113938,8.7923274e-7,0.000027027738,0.00006995788,0.9167396,0.0011942775,0.000007705301,0.07833177],"study_design_scores_gemma":[0.0008256542,0.00028187697,0.0007325193,0.000018449826,0.000014041373,0.0000025037036,0.00007745877,0.0009590671,0.9845132,0.001464585,0.010937101,0.00017351774],"about_ca_topic_score_codex":0.00016526303,"about_ca_topic_score_gemma":0.00013340732,"teacher_disagreement_score":0.12208396,"about_ca_system_score_codex":0.000022391834,"about_ca_system_score_gemma":0.00012220684,"threshold_uncertainty_score":0.6165709},"labels":[],"label_agreement":null},{"id":"W2922025985","doi":"10.1007/978-1-4939-9154-9_19","title":"In Vitro Characterization of a Multidomain Glycosyltransferase Using Fluorescently Tagged Synthetic Acceptors","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Glycosyltransferase; In vitro; Biochemistry; Chemistry; Enzyme","score_opus":0.015531682557980642,"score_gpt":0.36964278113848203,"score_spread":0.3541110985805014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922025985","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6872542,0.00008481698,0.3118117,0.000045824585,0.00011964356,0.0005974221,0.000018296778,0.000003967509,0.00006413726],"genre_scores_gemma":[0.7962839,0.000043439144,0.2032095,0.00014410923,0.000024078874,0.000050634633,0.00015304357,0.00003077296,0.00006050411],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971117,0.0014391661,0.0004604695,0.0004975584,0.00011199978,0.00037911008],"domain_scores_gemma":[0.999303,0.000045958208,0.00009964689,0.00043036026,0.00006956566,0.00005150326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011107934,0.00019165322,0.00034550432,0.00034803158,0.000018435116,0.000008630782,0.00025963533,0.00031990788,0.0001316975],"category_scores_gemma":[0.00033382475,0.00019381032,0.00011052475,0.00038436623,0.00010730133,0.0000068166023,0.00011138081,0.00019829485,0.000007577474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004927152,0.00011147277,0.0031020744,0.000040266546,0.000018624633,0.000008243592,0.0000444034,0.000124376,0.9913424,0.00014486336,4.4307646e-7,0.004570079],"study_design_scores_gemma":[0.0012897175,0.00015661339,0.0009345359,0.000023157678,0.000004977884,0.000008254598,0.000019251454,0.0032003736,0.9930192,0.00017219676,0.0009820204,0.00018966915],"about_ca_topic_score_codex":0.00008517465,"about_ca_topic_score_gemma":0.000009787896,"teacher_disagreement_score":0.109029695,"about_ca_system_score_codex":0.00004167029,"about_ca_system_score_gemma":0.00008894813,"threshold_uncertainty_score":0.7903356},"labels":[],"label_agreement":null},{"id":"W2922168875","doi":"10.1007/978-1-4939-9213-3_10","title":"New Advances for Newborn Screening of Inborn Errors of Metabolism by Capillary Electrophoresis-Mass Spectrometry (CE-MS)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Newborn screening; Multiplex; Capillary electrophoresis; Mass spectrometry; Medicine; Tandem mass spectrometry; Metabolite; Inborn error of metabolism; Population; Computational biology; Chromatography; Chemistry; Bioinformatics; Internal medicine; Biology; Pediatrics","score_opus":0.007243610061300854,"score_gpt":0.3261910176956126,"score_spread":0.31894740763431173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922168875","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11807025,0.0574666,0.8229343,0.000060248774,0.00026531226,0.0004710761,0.000051679195,0.000006330805,0.0006741878],"genre_scores_gemma":[0.017389076,0.0027341696,0.9790644,0.00018667999,0.00006918757,0.000032007963,0.00018079074,0.000051494113,0.0002921919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974578,0.00059930136,0.00063312316,0.0006645991,0.00013042484,0.00051475194],"domain_scores_gemma":[0.99872464,0.000103284285,0.00033895034,0.00062855287,0.00010682427,0.00009773837],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009158045,0.00030859406,0.0007652079,0.00024604038,0.000021340305,0.000005399733,0.00052081136,0.0003696217,0.00007814019],"category_scores_gemma":[0.00041946163,0.000298018,0.00027943042,0.00042267801,0.00014024488,0.000005444865,0.00013052313,0.00015022556,0.0000011956138],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025635533,0.0000408187,0.002628414,0.00006316919,0.00013511373,5.069171e-7,0.000023462346,0.0001586616,0.9502448,0.000825428,0.00029862588,0.045324657],"study_design_scores_gemma":[0.0013544511,0.00045567696,0.00076670543,0.000012612917,0.00005891966,0.0000024123601,0.00007508638,0.000052884698,0.89444613,0.0045123002,0.09799036,0.00027247838],"about_ca_topic_score_codex":0.00010899911,"about_ca_topic_score_gemma":0.00001433725,"teacher_disagreement_score":0.15613009,"about_ca_system_score_codex":0.000004521381,"about_ca_system_score_gemma":0.00013867278,"threshold_uncertainty_score":0.9999472},"labels":[],"label_agreement":null},{"id":"W2922355147","doi":"10.1007/978-1-4939-9154-9_11","title":"Designing Glycosyltransferase Expression Constructs for Improved Purification, Protein Yield, and Crystallization","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Glycosyltransferase; Computational biology; Biochemistry; Protein expression; Chemistry; Biology; Computer science; Enzyme; Gene","score_opus":0.016762704064560725,"score_gpt":0.3132807999311571,"score_spread":0.2965180958665964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922355147","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40072864,0.00089567405,0.59754515,0.000054565917,0.00006274186,0.00063865393,0.00001093666,0.000002540911,0.00006107985],"genre_scores_gemma":[0.33283073,0.00009145406,0.66667736,0.0001235849,0.00002440303,0.00014921569,0.00004183293,0.000017431188,0.00004397133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988853,0.00020557032,0.0002298419,0.00044218628,0.000022859684,0.00021426941],"domain_scores_gemma":[0.99951553,0.00005866216,0.00006810496,0.00024309139,0.00007599377,0.000038635408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048976444,0.0001477549,0.00019113203,0.00005736506,0.000046972244,0.000012367349,0.00010823269,0.00020388575,0.000004717788],"category_scores_gemma":[0.00028075645,0.00014176134,0.000045989014,0.000063506865,0.00007517018,9.138959e-7,0.000063883715,0.00005872521,3.6943123e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008755892,0.00001492789,0.0012553165,0.000029743369,0.000020954481,2.2529323e-7,0.000034671957,0.000024560355,0.9928044,0.0008325317,0.0000037469874,0.004891374],"study_design_scores_gemma":[0.0006725644,0.0003040195,0.0001921082,0.0000163071,0.000008494766,0.0000040307787,0.000050144405,0.00015687002,0.99152935,0.003945432,0.0029464043,0.00017429629],"about_ca_topic_score_codex":0.000007327488,"about_ca_topic_score_gemma":0.0000046586956,"teacher_disagreement_score":0.0691322,"about_ca_system_score_codex":0.0000073983406,"about_ca_system_score_gemma":0.00003838062,"threshold_uncertainty_score":0.57808596},"labels":[],"label_agreement":null},{"id":"W2922488460","doi":"10.1007/978-1-4939-9154-9_10","title":"Assays for the Enzymes Catalyzing the O-Acetylation of Bacterial Cell Wall Polysaccharides","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Canadian Institutes of Health Research","keywords":"Acetylation; Polysaccharide; Cell wall; Enzyme; Acetyltransferases; Biochemistry; Bacterial cell structure; Cell; Chemistry; Innate immune system; Bacteria; Microbiology; Biology; Gene; Genetics","score_opus":0.019557720362462738,"score_gpt":0.373343220224508,"score_spread":0.35378549986204527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2922488460","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3321405,0.0021362854,0.6633177,0.0004795961,0.0003130687,0.0010712298,0.000020190775,0.0000060278026,0.00051538675],"genre_scores_gemma":[0.88338435,0.00012015289,0.115310125,0.00027184567,0.00010309325,0.00016150725,0.00013578037,0.000027863418,0.00048529002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984592,0.0006503302,0.00026900732,0.00029101997,0.00007673374,0.0002536756],"domain_scores_gemma":[0.9989902,0.0002775168,0.00012018591,0.0004943312,0.000093703165,0.00002406944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017862417,0.00012472646,0.00017178657,0.00006078632,0.000059724687,0.000015918691,0.00038719265,0.00019079067,0.000063910215],"category_scores_gemma":[0.00036786083,0.00007719585,0.00012589194,0.000134813,0.00012050167,0.0000028072284,0.0001510819,0.00012718856,0.0000042411743],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012225907,0.000020093008,0.0011421007,0.000018137114,0.00002792351,1.9871428e-7,0.000052777836,0.00014289412,0.98985755,0.0014276537,0.000041635245,0.007146744],"study_design_scores_gemma":[0.000558942,0.00021050192,0.0005569337,0.0000040191976,0.000010319034,0.000002158772,0.00007010224,0.00092856627,0.9715048,0.00061802694,0.025438372,0.00009723625],"about_ca_topic_score_codex":0.00009176224,"about_ca_topic_score_gemma":0.000031877596,"teacher_disagreement_score":0.55124384,"about_ca_system_score_codex":0.000011599472,"about_ca_system_score_gemma":0.000070637514,"threshold_uncertainty_score":0.31479555},"labels":[],"label_agreement":null},{"id":"W2923377589","doi":"10.1007/978-1-4939-9158-7_2","title":"β-Arrestins: Multitask Scaffolds Orchestrating the Where and When in Cell Signalling","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research; Agence Nationale de la Recherche","keywords":"Scaffold protein; G protein-coupled receptor; Biology; Cell biology; Signalling; Signal transducing adaptor protein; Signal transduction; Endocytosis; Compartmentalization (fire protection); Neuroscience; Receptor; Genetics","score_opus":0.05288364077229508,"score_gpt":0.4015967133740045,"score_spread":0.3487130726017094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2923377589","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00045943054,0.8757139,0.12252015,0.000015377367,0.0002582356,0.00079369394,0.000011551673,0.000008517414,0.00021915585],"genre_scores_gemma":[0.000043930086,0.6968556,0.30253327,0.000078761776,0.00010450728,0.00012353972,0.00008420646,0.000070528855,0.000105663035],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9944786,0.003030574,0.0008320678,0.0010079668,0.000092461625,0.000558334],"domain_scores_gemma":[0.9985773,0.00036760472,0.00036018674,0.0005858766,0.00003895859,0.0000700706],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027375882,0.00056076463,0.0012486487,0.00019005836,0.00006070366,0.000050598454,0.00060608354,0.001104547,0.00003368209],"category_scores_gemma":[0.0003026164,0.00040839243,0.0003103159,0.0002217671,0.00013200488,0.0000034028353,0.00039964213,0.00053107715,0.000005683862],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010260535,0.000039793533,0.000050060684,0.0024550334,0.000074835705,0.000024108389,0.000085372376,0.0000688181,0.42084998,0.0002710475,0.000015374168,0.5760553],"study_design_scores_gemma":[0.0010976976,0.0006218426,0.0000021816543,0.0052754185,0.00039074678,0.00009917018,0.00024956785,0.00053772883,0.063028485,0.0029659576,0.92398536,0.0017458197],"about_ca_topic_score_codex":0.000097013224,"about_ca_topic_score_gemma":0.000049129794,"teacher_disagreement_score":0.92397,"about_ca_system_score_codex":0.0000398406,"about_ca_system_score_gemma":0.0002212256,"threshold_uncertainty_score":0.9998368},"labels":[],"label_agreement":null},{"id":"W2925793627","doi":"10.1007/978-1-4939-9158-7_5","title":"Measuring Recruitment of β-Arrestin to G Protein-Coupled Heterodimers Using Bioluminescence Resonance Energy Transfer","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Bioluminescence; Energy transfer; Resonance (particle physics); Biophysics; Materials science; Chemistry; Physics; Biology; Chemical physics; Atomic physics; Biochemistry","score_opus":0.0637547849459446,"score_gpt":0.3571130341071689,"score_spread":0.29335824916122427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2925793627","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4907409,0.00079430075,0.5078672,0.000014932331,0.00015272279,0.00038331017,0.0000032843159,0.0000048899005,0.000038458867],"genre_scores_gemma":[0.5061203,0.000031274536,0.4934549,0.0001621132,0.000033246946,0.00009292325,0.000013481868,0.000032010692,0.000059701197],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99764526,0.0007102665,0.00045825157,0.000662552,0.0001094377,0.00041425056],"domain_scores_gemma":[0.99924785,0.000025815472,0.000077054465,0.00047518677,0.00008849974,0.000085612926],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010648675,0.00024140456,0.0003980387,0.0001507731,0.000028124083,0.000007736839,0.0003191131,0.0002665153,0.000038158138],"category_scores_gemma":[0.0001622502,0.00023449417,0.00013791112,0.0002704328,0.00006213085,0.0000030444328,0.00012728531,0.00010929084,0.0000019313545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013700363,0.00003717585,0.00069844024,0.00002400345,0.000026187952,0.0000035336996,0.000035452642,0.00063495134,0.9888926,0.00087217125,6.552857e-7,0.008637826],"study_design_scores_gemma":[0.00047118525,0.00045379304,0.000049063477,0.000090492904,0.000008566646,0.000006046764,0.000025540641,0.0010188645,0.9948376,0.00021686191,0.0025521857,0.00026984146],"about_ca_topic_score_codex":0.00018030235,"about_ca_topic_score_gemma":0.000018958091,"teacher_disagreement_score":0.0153794475,"about_ca_system_score_codex":0.000033926048,"about_ca_system_score_gemma":0.00007108757,"threshold_uncertainty_score":0.9562395},"labels":[],"label_agreement":null},{"id":"W2929013716","doi":"10.1007/978-1-4939-9158-7_10","title":"Methods to Investigate the β-Arrestin-Mediated Control of ARF6 Activation to Regulate Trafficking and Actin Cytoskeleton Remodeling","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Cell biology; RAC1; Arrestin; GTPase; RHOA; Actin cytoskeleton; ADP ribosylation factor; Cytoskeleton; Receptor; Stimulation; Actin; Small GTPase; G protein-coupled receptor; Chemistry; Biology; Signal transduction; Neuroscience; Biochemistry; Cell","score_opus":0.016673742859806828,"score_gpt":0.358372746887648,"score_spread":0.34169900402784115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2929013716","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4655866,0.00016851483,0.53341055,0.00029812573,0.00012000486,0.00037199858,0.000002495594,0.000007201132,0.00003448395],"genre_scores_gemma":[0.41592413,0.000014696827,0.582887,0.0010436904,0.000037043657,0.000030867857,0.000014880068,0.000025605781,0.000022089936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99664086,0.0018812496,0.00045644693,0.00057994324,0.00008718685,0.00035430404],"domain_scores_gemma":[0.9988483,0.00032329894,0.00017364514,0.0004479894,0.000089554465,0.0001171935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0033175016,0.00022755087,0.0003997697,0.00016555522,0.00004894198,0.00001691851,0.00027759417,0.0002877961,0.000014176052],"category_scores_gemma":[0.0016541836,0.0001823632,0.00008549999,0.00031362651,0.00006617441,0.000004351241,0.000166888,0.00020105962,0.0000020245043],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014108971,0.000011468392,0.00031513182,0.0000151432605,0.000036631365,5.6237775e-7,0.00018471852,0.0072032996,0.9535191,0.0003982226,0.0000040381397,0.03817056],"study_design_scores_gemma":[0.0005460215,0.0003661193,0.00020439601,0.0000474353,0.000015767977,0.0000053074855,0.000103231214,0.005883822,0.98788637,0.0013062904,0.003416829,0.00021840447],"about_ca_topic_score_codex":0.000045601835,"about_ca_topic_score_gemma":0.0000054663715,"teacher_disagreement_score":0.049662482,"about_ca_system_score_codex":0.000020095129,"about_ca_system_score_gemma":0.00005646202,"threshold_uncertainty_score":0.74365556},"labels":[],"label_agreement":null},{"id":"W2929055980","doi":"10.1007/7651_2019_216","title":"Targeted, Amplicon-Based, Next-Generation Sequencing to Detect Age-Related Clonal Hematopoiesis","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Acute Myeloid Leukemia Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"European Hematology Association","keywords":"Amplicon sequencing; Amplicon; Biology; Computational biology; Haematopoiesis; Genetics; Stem cell; Gene; Polymerase chain reaction","score_opus":0.06553382273419003,"score_gpt":0.3994833799490471,"score_spread":0.3339495572148571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2929055980","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43449482,0.00038315495,0.56249243,0.0009108358,0.00021591988,0.00077156024,0.0000045476463,0.00005799665,0.00066875893],"genre_scores_gemma":[0.16682734,0.000009429181,0.8296142,0.002957301,0.00006805863,0.00010952018,0.000109269895,0.000051902985,0.00025298516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965514,0.001462749,0.00050202885,0.0006857252,0.00019028621,0.00060778775],"domain_scores_gemma":[0.9985761,0.00037885338,0.0000822564,0.0006424237,0.00012289365,0.00019749084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021709604,0.00025403072,0.0005921376,0.0005724499,0.000045934292,0.000023399123,0.00024152966,0.0004395312,0.00041159964],"category_scores_gemma":[0.0013313056,0.00023169263,0.00015741627,0.0007969447,0.000116155126,0.0000345384,0.0001362138,0.000608195,0.00019195356],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010651346,0.000016715934,0.0014474975,0.00004405223,0.00006018905,0.00022605469,0.000080447295,0.0008329697,0.98245853,0.0008607293,0.00008122509,0.013785044],"study_design_scores_gemma":[0.0017150706,0.00056071323,0.00041102432,0.000053567648,0.000033665186,0.00011244259,0.000054748743,0.018071491,0.97445637,0.0018364512,0.0024015398,0.00029292383],"about_ca_topic_score_codex":0.00025958146,"about_ca_topic_score_gemma":0.000022313972,"teacher_disagreement_score":0.26766747,"about_ca_system_score_codex":0.0007376515,"about_ca_system_score_gemma":0.00047800053,"threshold_uncertainty_score":0.9448151},"labels":[],"label_agreement":null},{"id":"W2929346300","doi":"10.1007/978-1-4939-9158-7_3","title":"Methods to Monitor the Trafficking of β-Arrestin/G Protein-Coupled Receptor Complexes Using Enhanced Bystander BRET","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Arrestin; Endosome; G protein-coupled receptor; Cell biology; Receptor; Chemistry; Bystander effect; Biology; Biochemistry","score_opus":0.025874225044657653,"score_gpt":0.3901087925170994,"score_spread":0.36423456747244176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2929346300","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4587992,0.00045026894,0.5397827,0.0000369194,0.0002994386,0.0005633612,0.0000050828817,0.000008211128,0.00005480652],"genre_scores_gemma":[0.32348442,0.000009142088,0.6761154,0.00015604765,0.00007607915,0.000054554414,0.000017103948,0.00003779829,0.000049464514],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99592173,0.0022181468,0.0005880745,0.0006614062,0.00012549949,0.0004851327],"domain_scores_gemma":[0.9987258,0.00016203208,0.00024255137,0.00064318994,0.00014255097,0.00008391349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028304604,0.00030130375,0.0005377881,0.0001354258,0.0000705377,0.000020464922,0.00052165956,0.0003422611,0.00014792717],"category_scores_gemma":[0.0005764651,0.00023526861,0.0001952041,0.00035316398,0.0001186796,0.000003924257,0.00025719457,0.00023291925,0.000004036996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013917581,0.000034437417,0.00008544532,0.000028295079,0.00006680247,8.0586756e-7,0.00015071435,0.0020168063,0.98590136,0.0008041142,0.0000043153627,0.0107677495],"study_design_scores_gemma":[0.0004867669,0.0004008511,0.000028853248,0.000057409554,0.000017526301,0.000005374888,0.00022992061,0.001909546,0.994284,0.0010183953,0.0012683922,0.0002929929],"about_ca_topic_score_codex":0.00006721588,"about_ca_topic_score_gemma":0.000006023804,"teacher_disagreement_score":0.13633268,"about_ca_system_score_codex":0.000035482557,"about_ca_system_score_gemma":0.00007315911,"threshold_uncertainty_score":0.95939755},"labels":[],"label_agreement":null},{"id":"W2931405160","doi":"10.1007/978-1-4939-9199-0_10","title":"Mass Spectrometry to Study the Bacterial Proteome from a Single Colony","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"Public Health Agency","keywords":"Proteome; Bacteria; Mass spectrometry; Chromatography; Identification (biology); Tandem mass spectrometry; Microbiology; Biology; Streptococcus pneumoniae; Microbiological culture; Chemistry; Computational biology; Bioinformatics; Genetics","score_opus":0.028263836096238094,"score_gpt":0.3671494485538909,"score_spread":0.3388856124576528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2931405160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81357676,0.000046907968,0.18408614,0.00025462348,0.00059553975,0.0010925842,0.000014251371,0.000015206017,0.0003179685],"genre_scores_gemma":[0.6116773,0.0000013498654,0.38747683,0.00036818214,0.00013780306,0.0001054092,0.00006678078,0.000021873675,0.00014446356],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967327,0.0018316763,0.00036899676,0.0006841756,0.000075219825,0.0003072049],"domain_scores_gemma":[0.9988345,0.000100577505,0.00009982539,0.0008394921,0.000061780476,0.00006382328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014351531,0.00018463511,0.00026695704,0.00008721169,0.000049092923,0.000052826254,0.00047495423,0.00018926949,0.00026398606],"category_scores_gemma":[0.000984561,0.0001501269,0.000082175546,0.0002909726,0.000056061337,0.0000026428706,0.0002617318,0.00016087363,0.000052331055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012338278,0.00016766704,0.01378673,0.0000023581074,0.00005097857,0.0000029864495,0.000121344274,0.0000055353366,0.9835846,0.000052035473,0.000013944849,0.0020884778],"study_design_scores_gemma":[0.00081226457,0.001103478,0.020021657,0.000005016114,0.00001767304,0.0000033534889,0.00025431515,0.000021892056,0.9723323,0.0015049123,0.0036694908,0.00025366808],"about_ca_topic_score_codex":0.00013166494,"about_ca_topic_score_gemma":0.000069980684,"teacher_disagreement_score":0.2033907,"about_ca_system_score_codex":0.000033591972,"about_ca_system_score_gemma":0.000039592836,"threshold_uncertainty_score":0.6121997},"labels":[],"label_agreement":null},{"id":"W2932590068","doi":"10.1007/978-1-4939-9158-7_11","title":"Methods to Investigate the Roles of β-Arrestin-Dependent RalGDS Activation in GPCR-Stimulated Membrane Blebbing","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Arrestin; Cell biology; G protein-coupled receptor; Chemistry; Biophysics; Biology; Signal transduction","score_opus":0.020660430302344036,"score_gpt":0.3738959825817201,"score_spread":0.35323555227937603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2932590068","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5166461,0.00021904563,0.48231235,0.00014486157,0.00016511475,0.00034694758,0.0000018020862,0.000006462814,0.0001573289],"genre_scores_gemma":[0.411402,0.000021838432,0.58787835,0.00048846344,0.000029371682,0.000061256076,0.000027417997,0.000029520634,0.00006180447],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99569106,0.0026637162,0.0005693056,0.00057855435,0.000107389,0.00038999665],"domain_scores_gemma":[0.99888897,0.0002248134,0.0001864541,0.00054810377,0.00007945911,0.0000721937],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037838055,0.0002455815,0.0004339219,0.0002229922,0.000032047512,0.000013709301,0.0004419616,0.0003553342,0.0000818662],"category_scores_gemma":[0.001010683,0.00019528581,0.00011238878,0.0004310385,0.00007841612,0.0000048593224,0.00027080774,0.00027040867,0.0000039542006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010338298,0.000030710555,0.0011056407,0.000020165107,0.000038141585,0.000001688059,0.00016983383,0.013152304,0.9713544,0.0008966511,0.000003139995,0.0131239],"study_design_scores_gemma":[0.00061621645,0.00025634834,0.00021224319,0.0000487008,0.0000106813295,0.000003807286,0.00012364256,0.002282844,0.9922296,0.002988048,0.0010046219,0.00022324777],"about_ca_topic_score_codex":0.000110110006,"about_ca_topic_score_gemma":0.000030449246,"teacher_disagreement_score":0.10556599,"about_ca_system_score_codex":0.000031832013,"about_ca_system_score_gemma":0.00007791845,"threshold_uncertainty_score":0.79635245},"labels":[],"label_agreement":null},{"id":"W2934066528","doi":"10.1007/978-1-4939-9045-0_28","title":"In Situ Hi-C for Plants: An Improved Method to Detect Long-Range Chromatin Interactions","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung; Institute of Genetics; Bundesministerium für Bildung und Forschung","keywords":"Chromosome conformation capture; Chromatin; Evening primrose; Chromosome; Genome; Biology; In situ; Computational biology; Genetics; DNA; Gene; Chemistry; Enhancer","score_opus":0.01269329020584888,"score_gpt":0.37631292423584867,"score_spread":0.3636196340299998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2934066528","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40467274,0.0001267399,0.59402657,0.00009479994,0.0002567123,0.0005877021,0.000030668867,0.000007759365,0.00019629474],"genre_scores_gemma":[0.13531826,0.000016942688,0.8631183,0.00089575566,0.00006934788,0.00023575983,0.00016905136,0.000047226706,0.00012935682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752903,0.00080338935,0.00044695547,0.000715405,0.000041963005,0.00046328027],"domain_scores_gemma":[0.9990087,0.000119534845,0.00011775082,0.00060308067,0.000051435225,0.00009949518],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001343924,0.00025683883,0.00039352078,0.00022557072,0.000029995297,0.000020399304,0.00039524556,0.00031407943,0.000033903852],"category_scores_gemma":[0.00022548436,0.00026436857,0.00012893173,0.00016285824,0.000030933745,0.0000063340103,0.00019338516,0.00018382381,0.000009087903],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013327599,0.00006210315,0.0007661367,0.000027138594,0.00003392265,0.0000044167778,0.000080008256,0.00042118374,0.9843701,0.00014787674,0.000023302498,0.013930513],"study_design_scores_gemma":[0.0015720773,0.0013258108,0.0017382426,0.000023450346,0.00001587002,0.00004665664,0.000160324,0.007943465,0.975941,0.0035386696,0.007171795,0.0005226523],"about_ca_topic_score_codex":0.00008334714,"about_ca_topic_score_gemma":0.00068309426,"teacher_disagreement_score":0.26935446,"about_ca_system_score_codex":0.00006391231,"about_ca_system_score_gemma":0.000061911625,"threshold_uncertainty_score":0.99998087},"labels":[],"label_agreement":null},{"id":"W2937037819","doi":"10.1007/978-1-4939-9121-1_13","title":"Measuring GPCR-Induced Activation of Protein Tyrosine Phosphatases (PTP) Using In-Gel and Colorimetric PTP Assays","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Tyrosine Phosphatases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Protein tyrosine phosphatase; G protein-coupled receptor; Chemistry; Phosphatase; Receptor; Signal transduction; Tyrosine; Biochemistry; Receptor tyrosine kinase; Enzyme; Cell biology; Biology","score_opus":0.042562377971689984,"score_gpt":0.35438628004200984,"score_spread":0.31182390207031985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937037819","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8672661,0.009156762,0.12239055,0.000030980435,0.00013641287,0.0009157955,0.00002803384,0.000009835823,0.000065506014],"genre_scores_gemma":[0.7113396,0.00006632262,0.2883117,0.00007531768,0.000024022818,0.000056665303,0.000085593514,0.00003104836,0.000009761357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974213,0.0008737671,0.00051749987,0.00066305586,0.00012116632,0.00040315936],"domain_scores_gemma":[0.9989657,0.00009972015,0.0002663378,0.000506524,0.00010078054,0.00006095946],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014394585,0.00027607052,0.0004798217,0.00038618143,0.000029432756,0.000013523675,0.00026296222,0.0003685013,0.00001574428],"category_scores_gemma":[0.0015840174,0.00028459108,0.000072961026,0.00067199697,0.000113845555,0.00001301163,0.00032017328,0.00021424108,0.0000017861852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018707312,0.00008669766,0.013676204,0.000073335235,0.000032510514,0.0000052136556,0.000012311009,0.00012161891,0.9738592,0.0016030498,0.0000018483905,0.01034092],"study_design_scores_gemma":[0.0012395266,0.00046405246,0.0032096654,0.00009338076,0.00001366544,0.000009724367,0.000022067392,0.00035744472,0.9930841,0.00095358654,0.0002643496,0.00028848325],"about_ca_topic_score_codex":0.0004582346,"about_ca_topic_score_gemma":0.000015127833,"teacher_disagreement_score":0.16592115,"about_ca_system_score_codex":0.00006257905,"about_ca_system_score_gemma":0.000118440264,"threshold_uncertainty_score":0.9999606},"labels":[],"label_agreement":null},{"id":"W2937155927","doi":"10.1007/978-1-4939-9121-1_16","title":"Monitoring the Aggregation of GPCRs by Fluorescence Microscopy","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"G protein-coupled receptor; Aggresome; Endoplasmic reticulum; Cytoplasm; Protein aggregation; Cell biology; Biophysics; Chemistry; Protein folding; Dynein; Fluorescence microscope; Microtubule; Fluorescence; Biology; Biochemistry; Ubiquitin; Signal transduction","score_opus":0.010786947962980502,"score_gpt":0.35659058491841733,"score_spread":0.3458036369554368,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937155927","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59283286,0.0022037977,0.40424523,0.00004305157,0.00036157318,0.0001754727,0.000003848354,0.0000038028215,0.00013035868],"genre_scores_gemma":[0.47608694,0.00035462325,0.5232118,0.00008449307,0.000054663054,0.000024631961,0.0000250233,0.000022489767,0.00013537046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986179,0.00054570363,0.0002509376,0.00031049128,0.00005949899,0.00021550975],"domain_scores_gemma":[0.9994088,0.000047551515,0.00011453051,0.00035734163,0.000046601308,0.000025219872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008660516,0.00012548604,0.00017922698,0.000040691204,0.000026108888,0.000007661773,0.00029111977,0.00019724187,0.000031137937],"category_scores_gemma":[0.00014102689,0.00009681015,0.00008041414,0.00012419585,0.00007887691,0.0000018847209,0.000103077,0.000120881,0.0000033092965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024031653,0.000015018221,0.0059929024,0.000009056644,0.000017109818,3.8967448e-7,0.000031066877,0.000043663258,0.9805523,0.0002698684,0.000018376095,0.013026213],"study_design_scores_gemma":[0.0002273089,0.00016869472,0.00010651413,0.000022137838,0.0000052082178,0.000002623643,0.00005893086,0.00007713682,0.9961594,0.0007429707,0.0023214044,0.000107670574],"about_ca_topic_score_codex":0.00003282669,"about_ca_topic_score_gemma":6.025581e-7,"teacher_disagreement_score":0.118966535,"about_ca_system_score_codex":0.000010700985,"about_ca_system_score_gemma":0.000026935742,"threshold_uncertainty_score":0.39478034},"labels":[],"label_agreement":null},{"id":"W2937315098","doi":"10.1007/978-1-4939-9121-1_23","title":"Preparation of Pulmonary Artery Myocytes and Rings to Study Vasoactive GPCRs","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pulmonary Hypertension Research and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba; Research Manitoba","funders":"Research Manitoba; Heart and Stroke Foundation of Canada","keywords":"Vasodilation; G protein-coupled receptor; Pulmonary artery; Myocyte; Contraction (grammar); Medicine; Receptor; Hypoxia (environmental); Extracellular; Internal medicine; Cardiology; Pharmacology; Biology; Chemistry; Cell biology","score_opus":0.030195429913302367,"score_gpt":0.44461849794952485,"score_spread":0.4144230680362225,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937315098","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9856323,0.00036370594,0.012095338,0.00013048515,0.000041013573,0.0009933843,0.00000266071,0.00000906265,0.00073203066],"genre_scores_gemma":[0.85862494,0.00001878306,0.14102885,0.00015948815,0.0000052319347,0.000050971754,0.000007727026,0.000008245048,0.00009574763],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986769,0.00056822016,0.00018328133,0.00031441127,0.000083449406,0.00017373601],"domain_scores_gemma":[0.9994051,0.00016522221,0.000037768103,0.00024902963,0.000058232235,0.00008464284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005173521,0.0001004963,0.0003287816,0.00020921334,0.000013242535,0.0000024121566,0.000051343086,0.00007110643,0.000030302102],"category_scores_gemma":[0.00013899167,0.000078865516,0.000035777066,0.00018067822,0.00004158411,0.000021649945,0.00009408467,0.000102997095,0.000009190743],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049224024,0.00049633486,0.39020818,0.000013322584,0.00013797094,0.00034739802,0.00011618027,0.0000024246233,0.5966434,0.000041163927,0.0000010908585,0.01150027],"study_design_scores_gemma":[0.002020481,0.005090345,0.76160884,0.000041374413,0.00009391179,0.00022862108,0.0005125121,0.0007216876,0.227765,0.0016231396,0.00014947618,0.00014461356],"about_ca_topic_score_codex":0.000048884387,"about_ca_topic_score_gemma":0.0000013798743,"teacher_disagreement_score":0.37140065,"about_ca_system_score_codex":0.000023054132,"about_ca_system_score_gemma":0.000027050686,"threshold_uncertainty_score":0.32160425},"labels":[],"label_agreement":null},{"id":"W2937318362","doi":"10.1007/978-1-4939-9121-1_14","title":"Measurement of β-Arrestin Recruitment at GPCRs Using the Tango Assay","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Arrestin; Functional selectivity; G protein; Signal transduction; Receptor; Computational biology; Biology; Cell biology; Intracellular; HEK 293 cells; Chemistry; Biochemistry","score_opus":0.08277844592996782,"score_gpt":0.39805094215316905,"score_spread":0.31527249622320125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2937318362","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3743279,0.0022192714,0.62210256,0.00006114969,0.00039701615,0.00050760794,0.0000034548525,0.0000045338024,0.00037651163],"genre_scores_gemma":[0.4397254,0.000082371764,0.5595236,0.00033401727,0.00006831846,0.00007161165,0.000020119129,0.000039342816,0.0001352295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99717265,0.0015796057,0.00036883718,0.00041865985,0.00015291208,0.00030732722],"domain_scores_gemma":[0.9991085,0.000044346016,0.0001735637,0.00053208927,0.000099494515,0.00004203984],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035533276,0.00018180908,0.00027966293,0.00006413802,0.000042253443,0.0000061720543,0.00030409158,0.0002281717,0.0001109356],"category_scores_gemma":[0.0003058051,0.00013376729,0.0001443824,0.00013886712,0.00008214764,0.00000128351,0.00025600384,0.00012377626,0.0000038910243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004652639,0.000028104832,0.0023528014,0.0000134838565,0.000055147735,0.0000017348029,0.00002941321,0.00070507766,0.99139595,0.0005656808,0.000014165741,0.004791925],"study_design_scores_gemma":[0.00036915907,0.00022419241,0.000095098905,0.000027371307,0.000017930608,0.00001020935,0.000051568524,0.00058047683,0.9878709,0.0006419713,0.009952204,0.00015893996],"about_ca_topic_score_codex":0.00004574534,"about_ca_topic_score_gemma":0.000014627996,"teacher_disagreement_score":0.065397486,"about_ca_system_score_codex":0.00007324313,"about_ca_system_score_gemma":0.000068354646,"threshold_uncertainty_score":0.54548717},"labels":[],"label_agreement":null},{"id":"W2939195505","doi":"10.1007/978-1-4939-9121-1_9","title":"Combining Conformational Profiling of GPCRs with CRISPR/Cas9 Gene Editing Approaches","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research; Faculty of Medicine, McGill University","keywords":"CRISPR; G protein-coupled receptor; Genome editing; Computational biology; Cas9; Cell signaling; Biology; Signal transduction; Chemistry; Gene; Cell biology; Genetics","score_opus":0.028656655900557312,"score_gpt":0.33206099135315365,"score_spread":0.3034043354525963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939195505","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41714144,0.00019165254,0.58143353,0.000016576607,0.00012865064,0.00018923313,0.0000051386746,0.000005592084,0.00088815053],"genre_scores_gemma":[0.3639668,0.000008435735,0.6357105,0.00008491393,0.000044071614,0.00002317876,0.0001230377,0.000018180948,0.000020894095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846554,0.00040433535,0.00038030196,0.0003628543,0.00009649518,0.0002904608],"domain_scores_gemma":[0.9993448,0.00005024677,0.0002075782,0.00027455855,0.00008008344,0.000042735046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012048404,0.00017802356,0.00031289473,0.0001059241,0.00003139855,0.000009701445,0.00020490722,0.00023150459,0.000039946248],"category_scores_gemma":[0.00012597433,0.00015388102,0.00008117936,0.00013426362,0.00008592545,0.0000049518535,0.00011584279,0.00013027411,0.0000021297776],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058843845,0.000025973744,0.0049136686,0.000036659298,0.00005272366,0.0000017725666,0.0000672093,0.0015150079,0.9839233,0.0071357936,0.0000015259928,0.0022674934],"study_design_scores_gemma":[0.000668858,0.00039857137,0.000059718997,0.000024332461,0.000010671219,0.000021534961,0.00035020796,0.0029320698,0.99422985,0.00086738204,0.00025346575,0.00018333666],"about_ca_topic_score_codex":0.000010122678,"about_ca_topic_score_gemma":0.0000014012023,"teacher_disagreement_score":0.05427694,"about_ca_system_score_codex":0.000012534719,"about_ca_system_score_gemma":0.000075264645,"threshold_uncertainty_score":0.6275086},"labels":[],"label_agreement":null},{"id":"W2939452521","doi":"10.1007/978-1-4939-9121-1_11","title":"Combining SRET2 and BiFC to Study GPCR Heteromerization and Protein–Protein Interactions","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Bimolecular fluorescence complementation; G protein-coupled receptor; Förster resonance energy transfer; Protein–protein interaction; Complementation; Receptor; Energy transfer; Chemistry; Fluorescence; Biophysics; Computational biology; Biology; Cell biology; Biochemistry; Physics; Gene","score_opus":0.015304067866769112,"score_gpt":0.36355227770483234,"score_spread":0.3482482098380632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939452521","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6096457,0.00013995169,0.3893809,0.000045126268,0.0000835851,0.0006193551,0.0000016659529,0.000006400052,0.000077264725],"genre_scores_gemma":[0.76797825,0.0000066101,0.23158851,0.00014863745,0.000019518839,0.00011542326,0.000015864913,0.00001983553,0.00010735948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826056,0.0007285377,0.00023984023,0.00051123754,0.000047088834,0.00021273627],"domain_scores_gemma":[0.9995557,0.000020720177,0.000067349276,0.00025015805,0.000036025467,0.00007001237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006972805,0.00016338135,0.00023080154,0.00012777145,0.00004901027,0.000026543099,0.00010400761,0.00012957826,0.000038026246],"category_scores_gemma":[0.000158886,0.00015773212,0.000032149725,0.0001337007,0.00003437578,0.000004190733,0.00022144901,0.00012946832,0.0000029110124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046731533,0.00005273284,0.0036420538,0.000009018534,0.000033269327,0.000002421777,0.00015155971,0.000023093937,0.983593,0.00057131547,5.5839985e-7,0.011874277],"study_design_scores_gemma":[0.0006828295,0.0013413882,0.000653728,0.000024512825,0.000009099427,0.000010742734,0.0002636165,0.00018056527,0.9939173,0.0014824368,0.0012131284,0.000220652],"about_ca_topic_score_codex":0.000030117606,"about_ca_topic_score_gemma":0.000007930646,"teacher_disagreement_score":0.1583325,"about_ca_system_score_codex":0.000008842077,"about_ca_system_score_gemma":0.0000132058085,"threshold_uncertainty_score":0.6432129},"labels":[],"label_agreement":null},{"id":"W2939655792","doi":"10.1007/978-1-4939-9121-1_22","title":"Laser Doppler Flowmetry to Study the Regulation of Cerebral Blood Flow by G Protein-Coupled Receptors in Rodents","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Laser Doppler velocimetry; Cerebral blood flow; Blood flow; Receptor; Internal medicine; Cardiology; Medicine; Neuroscience; Biology","score_opus":0.01064090254464618,"score_gpt":0.31917032534831685,"score_spread":0.3085294228036707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939655792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.827752,0.000202942,0.17053752,0.00005013742,0.00024183276,0.0011517331,0.000006086448,0.000005226986,0.0000525647],"genre_scores_gemma":[0.7653773,0.000006326952,0.23401287,0.00015213511,0.000034541998,0.00013154325,0.00005803215,0.00003073569,0.00019651816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971256,0.001362523,0.00047709316,0.00057651906,0.00013084253,0.0003274135],"domain_scores_gemma":[0.9991728,0.000038869806,0.00012566107,0.00055043306,0.0000616464,0.000050565424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001904629,0.00021526158,0.00034477803,0.00013924397,0.000027946255,0.000011084378,0.0003791412,0.0002729536,0.00023081225],"category_scores_gemma":[0.00022257585,0.000168855,0.00009725352,0.00036802544,0.00003818482,0.0000035453672,0.00021473879,0.00018401536,0.000006079067],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008938776,0.00021899916,0.012809962,0.00000684828,0.000070970396,0.0000011196952,0.00012373085,0.00067739614,0.9814469,0.000046763897,0.000020840911,0.0044870772],"study_design_scores_gemma":[0.0013045073,0.0007961385,0.0011313068,0.000014126169,0.000017445924,0.000002533777,0.0001797528,0.0009138852,0.99463373,0.00043335406,0.0003700651,0.00020314181],"about_ca_topic_score_codex":0.00010405206,"about_ca_topic_score_gemma":0.000036585836,"teacher_disagreement_score":0.063475356,"about_ca_system_score_codex":0.000017932005,"about_ca_system_score_gemma":0.000031836218,"threshold_uncertainty_score":0.6885707},"labels":[],"label_agreement":null},{"id":"W2939681462","doi":"10.1007/978-1-4939-9121-1_17","title":"Combining RNAi and Immunofluorescence Approaches to Investigate Post-endocytic Sorting of GPCRs into Multivesicular Bodies","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Endosome; Internalization; Endocytic cycle; G protein-coupled receptor; Cell biology; Receptor; ESCRT; Endocytosis; Chemistry; Clathrin; Protein targeting; Biology; Signal transduction; Membrane protein; Membrane; Biochemistry","score_opus":0.040036670791476645,"score_gpt":0.3315893755796345,"score_spread":0.29155270478815787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939681462","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73933524,0.0017100909,0.25832832,0.00008100336,0.000120214536,0.0003097466,0.0000023549994,0.0000075608964,0.00010545332],"genre_scores_gemma":[0.5344418,0.00004093147,0.4652224,0.0002002102,0.000012557683,0.00002519424,0.000017874385,0.000020087753,0.000018960634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977903,0.0007417796,0.0004493661,0.00059029734,0.00007757042,0.00035073343],"domain_scores_gemma":[0.99922234,0.00007875205,0.00017050553,0.00037067296,0.00006775038,0.00008996621],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012196992,0.00023633194,0.00042634326,0.00015517154,0.00004621911,0.000015179407,0.00026427142,0.00022437362,0.000009326305],"category_scores_gemma":[0.00066815113,0.00022249664,0.000097511744,0.00013119572,0.00017105592,0.0000052026703,0.000381201,0.00017295845,0.0000024066471],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060472805,0.000023512657,0.0058029345,0.0000578991,0.00005664411,0.000003431148,0.00059400214,0.00030704457,0.9827099,0.003598092,6.1519415e-7,0.006785475],"study_design_scores_gemma":[0.0005114292,0.0005499445,0.0004100091,0.000063494044,0.000013991188,0.000010938933,0.0005825018,0.0007839808,0.993509,0.0031346034,0.00016918303,0.00026095676],"about_ca_topic_score_codex":0.000098391116,"about_ca_topic_score_gemma":0.0000072821836,"teacher_disagreement_score":0.20689407,"about_ca_system_score_codex":0.00001719637,"about_ca_system_score_gemma":0.000053801956,"threshold_uncertainty_score":0.907315},"labels":[],"label_agreement":null},{"id":"W2939733308","doi":"10.1007/978-1-4939-9121-1_18","title":"Super-Resolution Imaging of G Protein-Coupled Receptors Using Ground State Depletion Microscopy","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Western University","funders":"","keywords":"G protein-coupled receptor; Heterotrimeric G protein; Cell biology; G protein; Endocytosis; G protein-coupled receptor kinase; Clathrin; Arrestin; Biology; Receptor; Signal transduction; Integral membrane protein; Chemistry; Membrane protein; Biochemistry; Membrane","score_opus":0.014042636468753792,"score_gpt":0.34621347172714384,"score_spread":0.33217083525839003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2939733308","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5204816,0.0006818341,0.47826988,0.000011712993,0.0002465318,0.00027245947,0.000003320157,0.000005754922,0.000026907199],"genre_scores_gemma":[0.4169538,0.000038943323,0.5827184,0.0000734327,0.000034154826,0.00001980453,0.00006515654,0.000034790814,0.000061544735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977176,0.00082477037,0.00044968154,0.00053555885,0.00008602543,0.0003863276],"domain_scores_gemma":[0.9992617,0.000027216156,0.00018881838,0.00037226037,0.00010120765,0.00004882655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001314734,0.00021681872,0.00033317824,0.00015847721,0.00003881338,0.000013451445,0.00021181541,0.0002173361,0.0000924569],"category_scores_gemma":[0.00016642618,0.0002183211,0.00013538178,0.0001955434,0.0001052253,0.0000062588256,0.00014037649,0.00015217325,0.0000034801926],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009807921,0.00003461327,0.004001718,0.000031007403,0.000027747896,0.0000018060367,0.00004385354,0.0004448834,0.9928381,0.00026660805,0.000001626271,0.0022099453],"study_design_scores_gemma":[0.0005903042,0.00022565677,0.00010839962,0.000040317533,0.000010931473,0.000010324492,0.00007189234,0.004416435,0.9919084,0.001572457,0.000804636,0.0002402636],"about_ca_topic_score_codex":0.00023659074,"about_ca_topic_score_gemma":0.0000085894735,"teacher_disagreement_score":0.10444849,"about_ca_system_score_codex":0.000046748148,"about_ca_system_score_gemma":0.000072998875,"threshold_uncertainty_score":0.89028764},"labels":[],"label_agreement":null},{"id":"W2940009823","doi":"10.1007/978-1-4939-9210-2_7","title":"Cos-Seq: A High-Throughput Gain-of-Function Screen for Drug Resistance Studies in Leishmania","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre hospitalier de l'Université Laval","funders":"","keywords":"Cosmid; Computational biology; Drug resistance; Identification (biology); Drug; Function (biology); Biology; Drug action; Throughput; Computer science; Pharmacology; Genetics; Gene","score_opus":0.07330943905613165,"score_gpt":0.462465897617538,"score_spread":0.38915645856140635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2940009823","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5223706,0.019005014,0.4466015,0.00485508,0.0008171957,0.003757433,0.000028370758,0.000065107044,0.0024997182],"genre_scores_gemma":[0.112081096,0.00083643047,0.8835427,0.0005814031,0.00007209316,0.00038799594,0.000032956996,0.000050908162,0.0024143865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99672556,0.0013057343,0.000625967,0.00063267554,0.00018308495,0.0005269826],"domain_scores_gemma":[0.9975872,0.0013249387,0.00017003015,0.00056195556,0.00030579173,0.000050080296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035618437,0.0002347779,0.0010600669,0.00042236826,0.000036994083,0.0000049752252,0.0002011789,0.0001736176,0.000021314416],"category_scores_gemma":[0.0028259153,0.000201347,0.00014306413,0.0005456235,0.00037851144,0.00004222926,0.0002164065,0.0003325515,0.0000093694725],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0036532383,0.00038747283,0.080131926,0.0015005504,0.0008947697,0.00010871179,0.0016810586,0.000062637024,0.85097134,0.045633126,0.0018052352,0.013169929],"study_design_scores_gemma":[0.027821727,0.0052895825,0.09166826,0.0023019544,0.00043983097,0.000039245147,0.0060842955,0.0007514126,0.5757952,0.22498828,0.063195884,0.0016243324],"about_ca_topic_score_codex":0.00017781054,"about_ca_topic_score_gemma":0.00038396622,"teacher_disagreement_score":0.4369412,"about_ca_system_score_codex":0.00021424718,"about_ca_system_score_gemma":0.000091988106,"threshold_uncertainty_score":0.8210692},"labels":[],"label_agreement":null},{"id":"W2942100880","doi":"10.1007/7651_2019_217","title":"Quantifying Senescence-Associated Phenotypes in Primary Multipotent Mesenchymal Stromal Cell Cultures","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; McGill University; Université de Montréal; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Mesenchymal stem cell; Senescence; Biology; Telomere; Cell biology; Phenotype; Stromal cell; Cell cycle; Cell cycle checkpoint; Stem cell; Cell; DNA damage; Cancer research; Immunology; Genetics; Gene; DNA","score_opus":0.02908194709900088,"score_gpt":0.37846972684144814,"score_spread":0.3493877797424473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942100880","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96139145,0.0017920895,0.03385453,0.00022191905,0.00043693738,0.00069310056,0.0000074346253,0.000056871115,0.0015456689],"genre_scores_gemma":[0.67521137,0.00011213027,0.3236982,0.0006031984,0.000031048818,0.000023181941,0.000056854824,0.000029357205,0.00023467891],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9966213,0.0012988237,0.00055954343,0.0006793449,0.0001869426,0.00065405236],"domain_scores_gemma":[0.99895436,0.0002776003,0.00015443216,0.00042415326,0.00007763671,0.00011182372],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012490425,0.00030359632,0.00078811625,0.00033794573,0.000035388337,0.000012802313,0.0002284545,0.00042384985,0.00008873384],"category_scores_gemma":[0.00049873785,0.00025971196,0.00015444888,0.00054022594,0.00012829513,0.000044253436,0.00013034198,0.00058151555,0.000036812187],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013003957,0.00022022711,0.2863305,0.00007988425,0.000023643071,0.00014325777,0.0002899734,0.000046529865,0.7058934,0.00015800273,0.000007312646,0.0066772387],"study_design_scores_gemma":[0.005407753,0.000698911,0.5365774,0.0003005134,0.00006630935,0.000056589073,0.0006372116,0.002084036,0.4520017,0.00043266558,0.0010373753,0.00069955457],"about_ca_topic_score_codex":0.0003468079,"about_ca_topic_score_gemma":0.000079979116,"teacher_disagreement_score":0.28984365,"about_ca_system_score_codex":0.00019648988,"about_ca_system_score_gemma":0.0001388449,"threshold_uncertainty_score":0.9999855},"labels":[],"label_agreement":null},{"id":"W2942562562","doi":"10.1007/978-1-4939-9195-2_8","title":"Immunofluorescence Labeling of Nuclear Receptor Expression in Formalin-Fixed, Paraffin-Embedded Tissue","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Immunofluorescence; Staining; Molecular biology; Biology; In vivo; Immunohistochemistry; Pathology; Antibody; Immunology; Medicine; Genetics","score_opus":0.009760119400579187,"score_gpt":0.36840374762588984,"score_spread":0.35864362822531065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942562562","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50302774,0.0017580999,0.4932549,0.00016684068,0.00016646934,0.000779982,0.000018638299,0.000028878181,0.0007984472],"genre_scores_gemma":[0.17965603,0.0003223982,0.81936157,0.00032335307,0.000020536998,0.00009149502,0.00012634421,0.000037616683,0.000060677787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99761534,0.00072857854,0.00056949223,0.00061552494,0.000069857124,0.00040119595],"domain_scores_gemma":[0.99886703,0.000045201596,0.0002016653,0.00076819287,0.00006724119,0.000050680963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009814315,0.0002369619,0.0004018141,0.00017377648,0.000027934066,0.0000064766045,0.00051800173,0.0005609904,0.000075082266],"category_scores_gemma":[0.00018305412,0.00023081637,0.000108496744,0.00028600066,0.0001515429,0.000004412494,0.000345999,0.0002658817,0.00001572503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009220172,0.00009125312,0.002033905,0.000024054487,0.000013664293,0.0000024247568,0.00004296151,0.00006780048,0.98801327,0.0039314893,0.000043193482,0.0056437952],"study_design_scores_gemma":[0.0005754815,0.00035058675,0.00018346918,0.000051729967,0.0000050153667,0.0000074974823,0.000045506004,0.00011752331,0.98251617,0.0011867416,0.014709476,0.00025081128],"about_ca_topic_score_codex":0.000041496074,"about_ca_topic_score_gemma":0.000007502144,"teacher_disagreement_score":0.32610667,"about_ca_system_score_codex":0.00002261089,"about_ca_system_score_gemma":0.000047334037,"threshold_uncertainty_score":0.9412418},"labels":[],"label_agreement":null},{"id":"W2942607373","doi":"10.1007/978-1-4939-9195-2_16","title":"Examining the Role of Nuclear Receptors During In Vivo Chemical-Mediated Breast Tumorigenesis","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinoids in leukemia and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"DMBA; In vivo; Carcinogenesis; Cancer research; Carcinogen; Breast cancer; Biology; Medicine; Chemistry; Cancer; Internal medicine; Genetics","score_opus":0.006760861116219785,"score_gpt":0.2760189637024669,"score_spread":0.26925810258624716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2942607373","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.994562,0.0013514751,0.0019984425,0.00003069133,0.00015650346,0.00021795002,0.0000073773062,0.000010377113,0.0016652041],"genre_scores_gemma":[0.95880383,0.00018804448,0.040689822,0.000098065284,0.000049343093,0.000029676421,0.000025190062,0.00004315557,0.000072855015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789894,0.00070669624,0.00042779403,0.00051074376,0.00008635905,0.0003694438],"domain_scores_gemma":[0.9991432,0.00009551549,0.00015629393,0.0005108162,0.00005125293,0.000042939922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087690994,0.00020890117,0.00033065013,0.00011288354,0.000024044468,0.000007786778,0.0004880464,0.00034012584,0.000105652594],"category_scores_gemma":[0.00033851425,0.00017097945,0.00010762978,0.0003374928,0.00018601,0.0000033134086,0.00026250666,0.00022477396,0.0000066667035],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083148916,0.00003750388,0.048428286,0.000033241184,0.000029175491,0.0000031620657,0.00009092914,0.000048309226,0.94877666,0.00015954154,0.000003451009,0.0023066143],"study_design_scores_gemma":[0.0005025918,0.00009216572,0.0015116158,0.00002828346,0.000008738415,0.000027790422,0.0003939954,0.00008617372,0.994187,0.00040577672,0.0025529305,0.00020296073],"about_ca_topic_score_codex":0.000049966136,"about_ca_topic_score_gemma":0.0000029047997,"teacher_disagreement_score":0.046916667,"about_ca_system_score_codex":0.000034706958,"about_ca_system_score_gemma":0.000063269894,"threshold_uncertainty_score":0.697234},"labels":[],"label_agreement":null},{"id":"W2943217942","doi":"10.1007/978-1-4939-9195-2_20","title":"Generation of Skeletal Myocytes from Embryonic Stem Cells Through Nuclear Receptor Signaling","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Embryoid body; Cell biology; Embryonic stem cell; Myocyte; Skeletal muscle; Biology; Stem cell; Myogenesis; Cellular differentiation; Chemistry; Adult stem cell; Anatomy; Genetics; Gene","score_opus":0.037987361776611994,"score_gpt":0.35853681888937317,"score_spread":0.32054945711276117,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943217942","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8028465,0.0017774003,0.1941935,0.000057157664,0.00036268763,0.00032165422,0.00003372794,0.000009931692,0.00039744365],"genre_scores_gemma":[0.38922986,0.0003638587,0.6092662,0.00024513164,0.00015814364,0.0000230569,0.0002369082,0.000065973276,0.00041085278],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967752,0.0015986494,0.00041069908,0.0006828617,0.00013721293,0.00039534288],"domain_scores_gemma":[0.99899507,0.00009560118,0.00016558635,0.0005993901,0.000090591864,0.000053736338],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090374047,0.00022147031,0.00038695635,0.0000916493,0.000031406576,0.000013888292,0.0004186681,0.0004267504,0.00018664487],"category_scores_gemma":[0.00007310562,0.00021784987,0.00017026962,0.00017931238,0.00013021893,0.000005800394,0.000289745,0.00022037215,0.00006244079],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056269342,0.00005378409,0.00052297383,0.000025875084,0.00008137466,0.0000030426268,0.00005601407,0.00044805458,0.9948487,0.0003347529,0.000078166886,0.003490974],"study_design_scores_gemma":[0.0005851744,0.00036771555,0.000027587217,0.000016850418,0.00001135191,0.0000020298617,0.00006545773,0.0008460753,0.98441076,0.00025641237,0.013188847,0.00022176414],"about_ca_topic_score_codex":0.00007479141,"about_ca_topic_score_gemma":0.0000052835667,"teacher_disagreement_score":0.4150727,"about_ca_system_score_codex":0.000035315108,"about_ca_system_score_gemma":0.00007273611,"threshold_uncertainty_score":0.888366},"labels":[],"label_agreement":null},{"id":"W2943935766","doi":"10.1007/978-1-4939-9182-2_13","title":"Mouse Whole Embryo Culture","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Toxicant; Embryo; Biology; Embryo culture; Andrology; In vivo; Teratology; Embryogenesis; Toxicology; Embryonic stem cell; Cell biology; Toxicity; Gestation; Pregnancy; Internal medicine; Genetics; Medicine; Gene","score_opus":0.015610824084144416,"score_gpt":0.3778938879722964,"score_spread":0.36228306388815196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943935766","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56912756,0.002611438,0.4162343,0.0002593464,0.00038307367,0.00066655094,0.00002750885,0.000031376803,0.010658826],"genre_scores_gemma":[0.11652224,0.0003609362,0.8528477,0.0016275092,0.00017285865,0.00012579396,0.0005149364,0.00011358734,0.02771446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971707,0.0011601293,0.00028662645,0.00071592623,0.00011389248,0.00055271236],"domain_scores_gemma":[0.9989638,0.000030817257,0.00006965195,0.0007618559,0.0000741429,0.00009973682],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001033302,0.00023215688,0.0003001439,0.0001353089,0.000030929532,0.000017816621,0.00051805173,0.0004780301,0.000085117055],"category_scores_gemma":[0.00026009147,0.00021022369,0.0001452221,0.00022818419,0.00011569717,0.0000028152242,0.00039780745,0.0003084094,0.00017845324],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052418072,0.0000538143,0.0036125805,0.000021355117,0.000038242724,0.000012373414,0.000023763763,0.00009786726,0.99223274,0.00043040662,0.00035680353,0.0030676555],"study_design_scores_gemma":[0.0006812141,0.00033068145,0.0002679411,0.0000070895767,0.0000048956913,0.000017765982,0.000040936833,0.00013411071,0.88259315,0.0006469419,0.115018055,0.00025722984],"about_ca_topic_score_codex":0.000019792775,"about_ca_topic_score_gemma":0.000009100128,"teacher_disagreement_score":0.4526053,"about_ca_system_score_codex":0.000028750334,"about_ca_system_score_gemma":0.00006334108,"threshold_uncertainty_score":0.8572673},"labels":[],"label_agreement":null},{"id":"W2943948155","doi":"10.1007/978-1-4939-9182-2_21","title":"Measurement of the Oxidative DNA Lesion 8-Oxoguanine (8-oxoG) by ELISA or by High-Performance Liquid Chromatography (HPLC) with Electrochemical Detection","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"DNA glycosylase; High-performance liquid chromatography; DNA damage; DNA; Chemistry; Reactive oxygen species; Lesion; Oxidative phosphorylation; Chromatography; Biochemistry; Molecular biology; Biology; Medicine; Pathology","score_opus":0.00900843975929335,"score_gpt":0.2831465463379488,"score_spread":0.27413810657865545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2943948155","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73256564,0.00052968966,0.26616666,0.000038398422,0.00010550906,0.00048116146,0.000007941969,0.000014507074,0.00009050273],"genre_scores_gemma":[0.93446285,0.00010786832,0.064918116,0.00022024887,0.000021456535,0.000106891006,0.000049925024,0.000042281314,0.00007037389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99749196,0.00084754825,0.00038446893,0.00063691684,0.0002352733,0.0004038587],"domain_scores_gemma":[0.9988741,0.000026218588,0.0002461878,0.00065288617,0.00014579007,0.000054814693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009937695,0.00029739048,0.00036811733,0.0000821631,0.000043980028,0.0000066331827,0.00042325605,0.0003714029,0.000021837704],"category_scores_gemma":[0.00016671525,0.00019675157,0.00010909089,0.00040437563,0.0001709789,0.0000055810847,0.00015544474,0.0002348703,0.0000020979062],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009202919,0.00010576341,0.0005326235,0.00003555605,0.00010426816,6.0428056e-7,0.000012136648,0.000008849866,0.99651146,0.00004764151,0.00004646881,0.0016743552],"study_design_scores_gemma":[0.0009782094,0.00318169,0.00015148988,0.000050039365,0.000031637454,0.000018404487,0.000018628762,0.0000629322,0.9935245,0.000063817926,0.0016560142,0.00026266865],"about_ca_topic_score_codex":0.000029736713,"about_ca_topic_score_gemma":0.000015858395,"teacher_disagreement_score":0.2018972,"about_ca_system_score_codex":0.00005935129,"about_ca_system_score_gemma":0.00008701852,"threshold_uncertainty_score":0.8023296},"labels":[],"label_agreement":null},{"id":"W2944057736","doi":"10.1007/978-1-4939-9182-2_15","title":"Rabbit Whole Embryo Culture","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biology; Embryo; Somite; Embryogenesis; Organogenesis; Neural tube; Embryology; Developmental toxicity; Rabbit (cipher); Cell biology; Yolk sac; Embryo culture; Embryonic stem cell; Anatomy; Andrology; Gestation; Genetics; Pregnancy","score_opus":0.02315044284920275,"score_gpt":0.40733136047370605,"score_spread":0.3841809176245033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944057736","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65523434,0.0038683186,0.30743256,0.002107435,0.00097304006,0.000918515,0.000007613216,0.0000791731,0.029378977],"genre_scores_gemma":[0.14621015,0.000034101966,0.8428781,0.0034430253,0.00011813344,0.000043193617,0.0000903962,0.000023267825,0.0071596056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979281,0.0009734376,0.00023868043,0.0005508355,0.000041500698,0.000267471],"domain_scores_gemma":[0.9991504,0.00006541711,0.000052547664,0.0005922527,0.000084681946,0.000054726173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012887416,0.0001419501,0.00041130718,0.0000903511,0.000018349276,0.0000026202558,0.0001178785,0.00037228267,0.0002578236],"category_scores_gemma":[0.00089849276,0.000104850275,0.000109187196,0.00020642037,0.00016085563,0.000016094466,0.0000759483,0.00039050909,0.0001924577],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043231144,0.000070014205,0.05499046,0.000021876713,0.000039532355,0.000020735843,0.00008349776,0.0000010818716,0.93497145,0.0010821673,0.000121940524,0.0081649115],"study_design_scores_gemma":[0.0018063145,0.00087028224,0.21151799,0.000030233085,0.000045174074,0.00011249685,0.000092512186,0.000065651104,0.64457,0.015088956,0.12552619,0.0002742027],"about_ca_topic_score_codex":0.000010674614,"about_ca_topic_score_gemma":7.88675e-7,"teacher_disagreement_score":0.5354456,"about_ca_system_score_codex":0.000036022473,"about_ca_system_score_gemma":0.000039336897,"threshold_uncertainty_score":0.427567},"labels":[],"label_agreement":null},{"id":"W2944173958","doi":"10.1007/978-1-4939-9454-0_16","title":"Data-Driven Flow Cytometry Analysis","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute; BC Cancer Agency","funders":"National Institute of General Medical Sciences; Genome Canada","keywords":"Normalization (sociology); Computer science; Identification (biology); Outlier; Population; Context (archaeology); Database normalization; Mass cytometry; Transformation (genetics); Data mining; Artificial intelligence; Pattern recognition (psychology); Geography; Biology; Medicine","score_opus":0.11751988163258131,"score_gpt":0.46332940061186634,"score_spread":0.345809518979285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944173958","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000005390255,0.5293371,0.4692754,0.000004798433,0.00038691578,0.0003178536,0.00040567742,0.00001178707,0.00025504857],"genre_scores_gemma":[0.000002217906,0.6149516,0.37689817,0.00011457679,0.00013404233,0.00003899955,0.0076262783,0.00007193485,0.00016218485],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99373204,0.0027376185,0.0009823218,0.0018008378,0.00012372146,0.0006234712],"domain_scores_gemma":[0.9963544,0.00017246712,0.00036512595,0.0029277573,0.000063990956,0.00011626457],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015696025,0.0006994663,0.0027021354,0.0008761843,0.000041662028,0.000036026056,0.0020094924,0.001611011,0.000059227412],"category_scores_gemma":[0.00046506018,0.0006179447,0.0010881914,0.0014757338,0.00017335528,0.0000033885974,0.0008958137,0.00063223613,0.000029368424],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002192623,0.00012488586,0.00021004003,0.0019214773,0.0033671102,0.000033432083,0.0000066947027,0.00020525955,0.019908616,0.00006640859,0.00012605253,0.9740081],"study_design_scores_gemma":[0.0002868407,0.00015605899,0.0000036332603,0.00024909136,0.0034117016,0.000020588755,0.0000030901795,0.0010432309,0.0006605098,0.00004757575,0.99338686,0.0007308122],"about_ca_topic_score_codex":0.00003403903,"about_ca_topic_score_gemma":0.000052926967,"teacher_disagreement_score":0.9932608,"about_ca_system_score_codex":0.000054471,"about_ca_system_score_gemma":0.00029638837,"threshold_uncertainty_score":0.9996851},"labels":[],"label_agreement":null},{"id":"W2944200709","doi":"10.1007/978-1-4939-9182-2_23","title":"Western Analysis of Breast Cancer 1 Protein (BRCA1)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Cytoplasm; Breast cancer; Biology; Apoptosis; Cancer research; Cell cycle; Nucleus; DNA damage; Neurodegeneration; Gene; Signal transduction; Cell biology; Nuclear protein; Cancer; DNA; Genetics; Transcription factor; Pathology; Medicine","score_opus":0.011602633624727713,"score_gpt":0.3635576266970526,"score_spread":0.3519549930723249,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944200709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7688668,0.00068615936,0.22963786,0.000062323015,0.00013020475,0.00029446103,0.00004273303,0.000009021847,0.00027046626],"genre_scores_gemma":[0.7584016,0.000032368232,0.24068664,0.00021453446,0.000035281104,0.00010318629,0.00008781852,0.000030978044,0.00040762362],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979482,0.00080050353,0.00034641716,0.000480884,0.000078331985,0.00034560548],"domain_scores_gemma":[0.999063,0.000017979497,0.00015777702,0.0006303423,0.00007148184,0.00005941094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008522167,0.00018719981,0.0004639871,0.00027526982,0.000010218279,0.000004090446,0.00030074618,0.00030955617,0.00018591339],"category_scores_gemma":[0.000058505007,0.00017561097,0.00024009265,0.0005600026,0.000074462914,0.0000022682968,0.000210373,0.00011306442,0.000006377315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005239831,0.000055320754,0.11642061,0.000017544635,0.00049516506,0.0000015616135,0.000020241436,0.00019937647,0.87832993,0.0006197436,0.0000016967111,0.0037864277],"study_design_scores_gemma":[0.00036783327,0.00013772219,0.014365787,0.000012171959,0.00018262655,0.000005787992,0.00001697045,0.00028557863,0.98289835,0.00027711564,0.0012292645,0.00022081517],"about_ca_topic_score_codex":0.000114521994,"about_ca_topic_score_gemma":0.000055237637,"teacher_disagreement_score":0.104568414,"about_ca_system_score_codex":0.000022764822,"about_ca_system_score_gemma":0.000050439758,"threshold_uncertainty_score":0.7161208},"labels":[],"label_agreement":null},{"id":"W2944227816","doi":"10.1007/978-1-4939-9182-2_1","title":"In Vitro Models in Developmental Toxicology","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Effects and risks of endocrine disrupting chemicals","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Developmental toxicity; Toxicology; Biology; Toxicity; In vitro; Chemical toxicity; Computational biology; Biochemical engineering; Medicine; Genetics; Engineering; Internal medicine","score_opus":0.019378186289215955,"score_gpt":0.4100550704853849,"score_spread":0.39067688419616897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944227816","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97166276,0.000062672334,0.018064825,0.00018868531,0.000113477035,0.00025018715,0.0000011359883,0.000008726177,0.009647557],"genre_scores_gemma":[0.4555943,0.000010877997,0.5435305,0.0007218295,0.0000040908376,0.00003245512,0.0000046223963,0.0000099940635,0.00009133393],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982497,0.00060265703,0.00027876967,0.00041128526,0.00005147455,0.00040612597],"domain_scores_gemma":[0.99954414,0.00022761301,0.00004047591,0.00015075612,0.0000017615703,0.000035254518],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089676137,0.00013105948,0.00028068022,0.000109065135,0.000008223277,0.000003557406,0.0002413094,0.00014589677,0.00035521685],"category_scores_gemma":[0.00014827876,0.00011610158,0.00003643379,0.0002695428,0.00009719129,0.000050512517,0.00029077593,0.00024632044,0.00007938209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028204933,0.00006914889,0.038865082,0.0000041563467,0.0000020749337,0.000052902833,0.00009115279,0.0014605889,0.9541906,0.0003197343,0.000011584141,0.0049047414],"study_design_scores_gemma":[0.0010359294,0.00006775488,0.0063892016,0.000011198011,0.0000016091925,0.000022667493,0.00005704145,0.00483899,0.95980775,0.026290888,0.0012072336,0.00026970453],"about_ca_topic_score_codex":0.00043042615,"about_ca_topic_score_gemma":0.00011371911,"teacher_disagreement_score":0.52546567,"about_ca_system_score_codex":0.00019106531,"about_ca_system_score_gemma":0.0000109213,"threshold_uncertainty_score":0.47344851},"labels":[],"label_agreement":null},{"id":"W2944276758","doi":"10.1007/978-1-4939-9224-9_9","title":"Trajectory Algorithms to Infer Stem Cell Fate Decisions","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Trajectory; Computer science; Algorithm; Theoretical computer science; Physics","score_opus":0.02832153040842726,"score_gpt":0.34887725987118956,"score_spread":0.3205557294627623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944276758","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44153133,0.0005099679,0.5557064,0.00004867392,0.00050499005,0.00027149712,0.000011712697,0.000013081848,0.0014023824],"genre_scores_gemma":[0.258046,0.000112008616,0.7386909,0.0017595845,0.00009604449,0.00005783871,0.000068244095,0.000065566004,0.0011037873],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976714,0.00070558256,0.00037628599,0.0006957093,0.00008460612,0.00046639875],"domain_scores_gemma":[0.9990126,0.00009467153,0.000060950773,0.0006267245,0.00006533927,0.00013971729],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00075689895,0.00026151375,0.0003492872,0.00017422019,0.00003576905,0.000016902903,0.000413268,0.00040856272,0.000049409282],"category_scores_gemma":[0.000084443236,0.00024833417,0.00016912782,0.00024448748,0.00006279568,0.0000024696171,0.00016737575,0.00022294323,0.00006670286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000067633955,0.00007970417,0.0042233854,0.000008104785,0.000022745018,0.000007515977,0.0000649407,0.00038335155,0.9619883,0.000116297444,0.00005284568,0.03298518],"study_design_scores_gemma":[0.00080759684,0.0005674645,0.0007017195,0.000013874432,0.000012256833,0.00000794107,0.000051793995,0.00020708966,0.9630923,0.00031756307,0.03384996,0.0003704246],"about_ca_topic_score_codex":0.0000419838,"about_ca_topic_score_gemma":0.00002317589,"teacher_disagreement_score":0.1834853,"about_ca_system_score_codex":0.000027380955,"about_ca_system_score_gemma":0.00007468634,"threshold_uncertainty_score":0.9999969},"labels":[],"label_agreement":null},{"id":"W2944371243","doi":"10.1007/978-1-4939-9454-0_4","title":"Method for Tagging Antibodies with Metals for Mass Cytometry Experiments","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; SickKids Foundation; Hospital for Sick Children","funders":"Hospital for Sick Children; Ontario Institute for Cancer Research","keywords":"Covalent bond; Chemistry; Metal; Polymer; Maleimide; Chelation; Flow cytometry; Materials science; Analytical Chemistry (journal); Polymer chemistry; Chromatography; Molecular biology; Biology; Organic chemistry","score_opus":0.027066794381860437,"score_gpt":0.40286511327472047,"score_spread":0.37579831889286003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944371243","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051627137,0.001206175,0.94535726,0.0000839388,0.00031986655,0.0009967712,0.00004080599,0.000017262126,0.00035075576],"genre_scores_gemma":[0.030634167,0.000037680653,0.9677035,0.0007309456,0.00007434907,0.00027335066,0.00016750259,0.000064249645,0.00031423965],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979514,0.0004555763,0.0003319481,0.0007083927,0.00006323303,0.0004894776],"domain_scores_gemma":[0.9991175,0.00018895614,0.000120757635,0.00041099053,0.00010175616,0.000060037346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012885114,0.0002836119,0.00049436296,0.00016535765,0.00005395927,0.000020356283,0.0002893755,0.00031749054,0.000011021121],"category_scores_gemma":[0.00017707286,0.00024222059,0.00021213746,0.00015358774,0.00008168189,0.000004159568,0.000058847156,0.00010303265,0.0000013909287],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042784045,0.000056050478,0.0030663104,0.00006828114,0.0001804684,0.0000014660112,0.00003695235,0.00013917862,0.98977864,0.0010995229,0.000020469899,0.0051248255],"study_design_scores_gemma":[0.0019405915,0.00096398604,0.000059968817,0.000017943838,0.00004448955,0.0000076076994,0.000082312195,0.0011932715,0.97394955,0.0013683563,0.020025808,0.0003460981],"about_ca_topic_score_codex":0.00001903897,"about_ca_topic_score_gemma":0.00000476268,"teacher_disagreement_score":0.022346228,"about_ca_system_score_codex":0.000020966334,"about_ca_system_score_gemma":0.000053103522,"threshold_uncertainty_score":0.98774683},"labels":[],"label_agreement":null},{"id":"W2944402108","doi":"10.1007/978-1-4939-9182-2_22","title":"Quantifying Activity for Repair of the DNA Lesion 8-Oxoguanine by Oxoguanine Glycosylase 1 (OGG1) in Mouse Adult and Fetal Brain Nuclear Extracts Using Biotin-Labeled DNA","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"DNA glycosylase; DNA damage; Biochemistry; DNA oxidation; DNA; Lesion; Biology; Molecular biology; Chemistry; Pathology; Medicine","score_opus":0.02922400694696592,"score_gpt":0.36513025486731476,"score_spread":0.33590624792034884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944402108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98134744,0.0015627134,0.015771491,0.0003376575,0.00022250476,0.00065003475,0.000041686053,0.00001615733,0.00005031191],"genre_scores_gemma":[0.8655433,0.0002742314,0.13354963,0.00037278092,0.00002691439,0.000010848427,0.000029421755,0.000050520008,0.00014232694],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974244,0.0009909782,0.00042811755,0.0006628594,0.00007962703,0.0004139706],"domain_scores_gemma":[0.9990136,0.0001621906,0.0002474832,0.0004445734,0.00008051167,0.000051647377],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011491198,0.00028388624,0.00048234157,0.00010877663,0.00008270902,0.00000906507,0.00022605892,0.00061402225,0.0000051452334],"category_scores_gemma":[0.0009875641,0.00021993354,0.00018250797,0.00023006051,0.0002528994,0.000006195359,0.00035983927,0.00030538972,6.061293e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034418996,0.00015551293,0.005150021,0.00009541661,0.000088105146,0.0000028347365,0.000062667896,0.000027660953,0.9917108,0.00022945918,0.000056287954,0.0020770726],"study_design_scores_gemma":[0.00197045,0.0004822101,0.0011046248,0.00006787356,0.000028720535,0.000017192813,0.00011410302,0.0030003674,0.9916325,0.000067918896,0.0012379839,0.00027605565],"about_ca_topic_score_codex":0.00013045575,"about_ca_topic_score_gemma":0.00009176758,"teacher_disagreement_score":0.117778145,"about_ca_system_score_codex":0.000034401364,"about_ca_system_score_gemma":0.00004718535,"threshold_uncertainty_score":0.896863},"labels":[],"label_agreement":null},{"id":"W2944426429","doi":"10.1007/978-1-4939-9182-2_25","title":"Characterization of Epigenetic Histone Activation/Repression Marks in Sequences of Genes by Chromatin Immunoprecipitation-Quantitative Polymerase Chain Reaction (ChIP-qPCR)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Chromatin immunoprecipitation; Molecular biology; Methylated DNA immunoprecipitation; Histone; Biology; Chromatin; Immunoprecipitation; ChIP-on-chip; Epigenetics; ChIP-sequencing; DNA; DNA methylation; Gene; Chemistry; Histone H1; Chromatin remodeling; Biochemistry; Promoter; Gene expression","score_opus":0.0128219594998747,"score_gpt":0.3599694119938059,"score_spread":0.3471474524939312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944426429","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.723764,0.0023080842,0.2732917,0.000037644746,0.00012649607,0.0003181694,0.000021692536,0.0000029323817,0.00012927654],"genre_scores_gemma":[0.8672197,0.0007520994,0.13109508,0.000031494234,0.000014380715,0.00004262965,0.0007357824,0.00002445281,0.000084382475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99727035,0.0013043506,0.000687792,0.0004366134,0.00010405991,0.00019681356],"domain_scores_gemma":[0.9988322,0.00012535947,0.00054274366,0.00035251176,0.00011752339,0.000029611643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009691265,0.00018561512,0.00035981098,0.00025320696,0.000019604364,0.0000046621376,0.00017070354,0.00031554987,0.00003962865],"category_scores_gemma":[0.00028149944,0.00019078782,0.00007594912,0.0002940618,0.00011882593,0.000011163022,0.00007043429,0.00011202531,0.0000019258805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014068162,0.00010448391,0.007671549,0.000051119252,0.000023178427,3.15275e-7,0.00017394262,0.0002776929,0.98043555,0.00015040213,6.5840703e-7,0.010970441],"study_design_scores_gemma":[0.0005717592,0.00042252478,0.013139643,0.00006465649,0.0000082310125,6.255616e-7,0.00007726874,0.0005299532,0.9842398,0.0005963928,0.00017121296,0.00017792395],"about_ca_topic_score_codex":0.00023494611,"about_ca_topic_score_gemma":0.000015077172,"teacher_disagreement_score":0.1434557,"about_ca_system_score_codex":0.000037544283,"about_ca_system_score_gemma":0.00006993665,"threshold_uncertainty_score":0.77801013},"labels":[],"label_agreement":null},{"id":"W2944676085","doi":"10.1007/978-1-4939-9182-2_10","title":"Drosophila as a Model for Developmental Toxicology: Using and Extending the Drosophotoxicology Model","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Vancouver Island University","funders":"Vancouver Island University","keywords":"Toxicant; Drosophila melanogaster; Biology; Drosophila (subgenus); Offspring; Model organism; Developmental toxicity; Toxicology; Embryo; Evolutionary biology; Genetics; Genetic model; Zoology; Toxicity; Computational biology; Gene; Medicine; Internal medicine; Pregnancy","score_opus":0.10280617518602649,"score_gpt":0.4509867476204558,"score_spread":0.34818057243442935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944676085","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7518587,0.00009121305,0.24611309,0.0003292147,0.00019710405,0.0008942188,0.000014618761,0.000025382258,0.00047646655],"genre_scores_gemma":[0.6942051,0.00005151162,0.29975647,0.005448356,0.000017681548,0.00021961007,0.00000451964,0.000033795022,0.00026295506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99597013,0.0019301989,0.00035941682,0.000937695,0.00005905734,0.0007435041],"domain_scores_gemma":[0.9978572,0.0016116467,0.00011007067,0.00032093868,0.00003062203,0.000069536814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014763863,0.00025977768,0.00045415273,0.00022780169,0.00025280658,0.000016322596,0.0005416983,0.00044712576,0.000026736678],"category_scores_gemma":[0.0013382271,0.0001996012,0.00009498311,0.00025671467,0.0008713948,0.00006234083,0.0005063618,0.0005654532,0.000011326719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017362098,0.000051444567,0.0003305999,0.000012780403,0.000010160212,0.000009676625,0.00015172087,0.0048864917,0.9472662,0.046540454,0.0000034948487,0.00056335365],"study_design_scores_gemma":[0.0005173192,0.00020602372,0.000029865203,0.0000041193425,0.0000059683975,0.00014116093,0.000016526346,0.43357542,0.43841335,0.12690441,0.000040339335,0.00014550667],"about_ca_topic_score_codex":0.0000060634284,"about_ca_topic_score_gemma":0.0000025739469,"teacher_disagreement_score":0.50885284,"about_ca_system_score_codex":0.00007273016,"about_ca_system_score_gemma":0.00021575854,"threshold_uncertainty_score":0.81395006},"labels":[],"label_agreement":null},{"id":"W2944733637","doi":"10.1007/978-1-4939-9182-2_26","title":"The Application of High-Resolution Ultrasound for Assessment of Cardiac Structure and Function Associated with Developmental Toxicity","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital Heart Disease Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Conceptus; Medicine; Ultrasound; Cardiac function curve; Fetus; Pregnancy; Biology; Cardiology; Radiology; Heart failure","score_opus":0.013798809000593567,"score_gpt":0.36017342605521474,"score_spread":0.3463746170546212,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944733637","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7616026,0.00031240328,0.23732355,0.000024260444,0.000046066885,0.00060553127,0.000031989515,0.0000040413815,0.000049594277],"genre_scores_gemma":[0.81068707,0.000012028754,0.18917762,0.000017815166,0.0000048554753,0.000043129723,0.00004369623,0.000005063423,0.00000872093],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9992952,0.00024144306,0.00016070082,0.00014683149,0.000058878883,0.00009698359],"domain_scores_gemma":[0.99927425,0.0004339486,0.00007656751,0.000099392106,0.000099789424,0.000016069316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004637706,0.00006819277,0.00023915982,0.0000381089,0.00002902687,0.0000013465198,0.000024308822,0.0000702647,0.0000020159546],"category_scores_gemma":[0.00022011672,0.00004543315,0.000031432715,0.0001089196,0.00010860872,0.000008264985,0.000023778883,0.000059394828,4.5762892e-8],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016978578,0.000024958628,0.15222615,0.000038600083,0.00018483728,8.109036e-8,0.000028532095,0.0000054040725,0.81945634,0.0013296201,0.0000016196677,0.026534073],"study_design_scores_gemma":[0.0009413203,0.00067217246,0.860615,0.000023932578,0.00015487715,0.0000029243502,0.00014645868,0.0005570287,0.13288327,0.0036821284,0.0002426569,0.00007819501],"about_ca_topic_score_codex":0.000031281514,"about_ca_topic_score_gemma":0.000041481802,"teacher_disagreement_score":0.70838886,"about_ca_system_score_codex":0.00006410576,"about_ca_system_score_gemma":0.000059371087,"threshold_uncertainty_score":0.18527101},"labels":[],"label_agreement":null},{"id":"W2944914686","doi":"10.1007/978-1-4939-9488-5_23","title":"Protocols for NMR Analysis in Livestock Metabolomics","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Genome Alberta; Canadian Institutes of Health Research; Health Canada; Alberta Innovates - Health Solutions; Genome Canada","keywords":"Metabolomics; Nuclear magnetic resonance spectroscopy; Sample preparation; Chemistry; Chromatography; Organic chemistry","score_opus":0.022257538591056916,"score_gpt":0.40348298870407795,"score_spread":0.38122545011302106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2944914686","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26922652,0.0013917196,0.7222072,0.00011885416,0.00013058847,0.006005595,0.000030301702,0.000009537723,0.00087967754],"genre_scores_gemma":[0.047177795,0.00016233209,0.94592464,0.00044720748,0.00006051724,0.0056178393,0.00013856018,0.00003959178,0.00043151373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975162,0.0006495353,0.0004942245,0.00077804236,0.00005974744,0.00050221744],"domain_scores_gemma":[0.9989981,0.00010407236,0.0001542631,0.0006187419,0.000072059425,0.000052755786],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017126463,0.0002616634,0.00075558614,0.0005333051,0.00002624252,0.00001437354,0.0003604593,0.00032652472,0.00003077096],"category_scores_gemma":[0.0005570436,0.00024590327,0.00032702368,0.0008092092,0.0000799439,0.0000027883152,0.00022330756,0.00016463114,0.0000040433424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014239468,0.00008815713,0.060469985,0.000023799737,0.00039323862,0.0000016841774,0.000023047725,0.00046677553,0.9282289,0.007782621,0.00001915666,0.0023602347],"study_design_scores_gemma":[0.0038665743,0.0013893538,0.02053073,0.000016399237,0.00029331679,0.000005858927,0.0001292083,0.0017395904,0.84337926,0.015263178,0.1124287,0.000957838],"about_ca_topic_score_codex":0.000032053962,"about_ca_topic_score_gemma":0.00009057694,"teacher_disagreement_score":0.22371744,"about_ca_system_score_codex":0.000027410118,"about_ca_system_score_gemma":0.000058246183,"threshold_uncertainty_score":0.99999934},"labels":[],"label_agreement":null},{"id":"W2945345698","doi":"10.1007/978-1-4939-9496-0_7","title":"Purification of Type IV Pili and Pilin Subunits","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Canadian Institutes of Health Research","keywords":"Pilus; Pilin; Fimbriae Proteins; Neisseria gonorrhoeae; Biophysics; Protein subunit; Shearing (physics); Chemistry; Microbiology; Biology; Biochemistry; Cell biology; Escherichia coli; Materials science","score_opus":0.01510356727530373,"score_gpt":0.3398907601978288,"score_spread":0.3247871929225251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945345698","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9560394,0.0006452894,0.04270625,0.000071378614,0.0001251796,0.00013936068,0.0000051530933,0.0000041030653,0.00026388114],"genre_scores_gemma":[0.86228836,0.00014571153,0.13709559,0.00013962579,0.000023928711,0.0000051404304,0.0001792644,0.000009815827,0.00011255173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991168,0.00026136552,0.00019652708,0.00027056428,0.00003044635,0.00012429009],"domain_scores_gemma":[0.9995966,0.000019659406,0.00007300984,0.00021779271,0.0000645114,0.000028450437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002680638,0.00009555543,0.00015679744,0.000047868547,0.0000091009015,0.0000032969392,0.00010303525,0.0002186197,0.000019719288],"category_scores_gemma":[0.00017876178,0.000084967156,0.000028209985,0.0001327021,0.00008173727,0.000001807633,0.00007317828,0.00007579785,0.0000020052323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005960815,0.000011049797,0.011301403,0.0000202876,0.000009885222,2.543179e-7,0.0000125565075,0.000002710167,0.98001164,0.00093393115,0.0000029890327,0.0076336907],"study_design_scores_gemma":[0.00025344978,0.0002156372,0.00816605,0.000005941977,0.0000050207336,0.000005275598,0.0000099515,0.00013375845,0.9877987,0.0013404192,0.0019611574,0.00010465363],"about_ca_topic_score_codex":0.000008035961,"about_ca_topic_score_gemma":0.000001151539,"teacher_disagreement_score":0.09438934,"about_ca_system_score_codex":0.000004416229,"about_ca_system_score_gemma":0.00001791492,"threshold_uncertainty_score":0.34648603},"labels":[],"label_agreement":null},{"id":"W2945822536","doi":"10.1007/978-1-4939-9488-5_5","title":"Analyses of Cholesterol Metabolites of Optic Nerve Using GC-MS Methods","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chromatography; Gas chromatography–mass spectrometry; Reproducibility; Mass spectrometry; Chemistry; Extraction (chemistry); Gas chromatography; Resolution (logic); Computer science; Artificial intelligence","score_opus":0.050358747833358745,"score_gpt":0.4543851418738246,"score_spread":0.40402639404046586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945822536","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5269666,0.0069414056,0.4653351,0.000013154708,0.00017240892,0.00017053523,0.000012426569,0.000003343689,0.0003850325],"genre_scores_gemma":[0.25009355,0.0002043263,0.74952143,0.00004625583,0.000029727855,0.000011749648,0.000021963948,0.000025043702,0.000045909273],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99632424,0.0018746153,0.00074140436,0.0005781283,0.00009369817,0.000387939],"domain_scores_gemma":[0.99849266,0.00015031152,0.00041689695,0.0007293858,0.0001559703,0.000054794116],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020791462,0.0002862556,0.0010017862,0.0003673683,0.000021104088,0.00000633439,0.00039710183,0.00028873878,0.000042254098],"category_scores_gemma":[0.00059757923,0.00025034702,0.0003339807,0.0005011379,0.0002374498,0.000004217967,0.00037466345,0.0001580546,9.612424e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053618067,0.000074617776,0.0073958593,0.00006133632,0.00039071034,0.000001786197,0.00002494201,0.0003911173,0.9857306,0.0024963422,0.0000016545798,0.0033774453],"study_design_scores_gemma":[0.00062552496,0.00033602913,0.0015562997,0.000014872631,0.00013990606,0.000013511081,0.00005794351,0.0005895696,0.99386406,0.0017818799,0.00079253473,0.00022786327],"about_ca_topic_score_codex":0.00015429336,"about_ca_topic_score_gemma":0.000003812371,"teacher_disagreement_score":0.28418633,"about_ca_system_score_codex":0.000013599349,"about_ca_system_score_gemma":0.00005992663,"threshold_uncertainty_score":0.9999949},"labels":[],"label_agreement":null},{"id":"W2945839632","doi":"10.1007/978-1-4939-9220-1_1","title":"siRNA Library Screening to Identify Complementary Therapeutic Pairs in Triple-Negative Breast Cancer Cells","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Alberta Innovates","keywords":"Triple-negative breast cancer; Small interfering RNA; Computational biology; Effector; Breast cancer; Cancer; Cancer research; Biology; RNA; Cell biology; Gene; Genetics","score_opus":0.02794017101913456,"score_gpt":0.39299543857701624,"score_spread":0.3650552675578817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2945839632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8112549,0.0010372174,0.18521352,0.0006668846,0.0005681919,0.00067473267,0.000118722346,0.000015784392,0.00045000817],"genre_scores_gemma":[0.70981216,0.00032166517,0.28218845,0.006699257,0.000118986994,0.0001565366,0.00017048033,0.000065436565,0.00046701782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972664,0.0010790565,0.00041373848,0.0006869764,0.000077761404,0.00047606195],"domain_scores_gemma":[0.99928766,0.000070213726,0.00009501589,0.00042707287,0.000036718757,0.00008333872],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005615379,0.0002611658,0.0003612467,0.00024800748,0.000026354523,0.000023476658,0.00047242816,0.00023096359,0.0004093543],"category_scores_gemma":[0.000026877924,0.00025270996,0.00012919525,0.0003358525,0.000070507915,0.000010945836,0.00036562042,0.00022991287,0.000026129906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002541603,0.00004916929,0.04628185,0.000012465917,0.00007690179,0.000012794619,0.000094206356,0.00037570257,0.93194634,0.000059995444,0.00021120005,0.020625236],"study_design_scores_gemma":[0.0011334664,0.00036022445,0.024834735,0.000057516703,0.000013652766,0.000009915618,0.0003159878,0.0002330419,0.9689928,0.00088050554,0.0027879304,0.00038021893],"about_ca_topic_score_codex":0.0004110714,"about_ca_topic_score_gemma":0.00013446501,"teacher_disagreement_score":0.101442754,"about_ca_system_score_codex":0.000027003012,"about_ca_system_score_gemma":0.000069494505,"threshold_uncertainty_score":0.9999925},"labels":[],"label_agreement":null},{"id":"W2946029388","doi":"10.1007/978-1-4939-9434-2_5","title":"Measurement and Analysis of Lysine Acetylation by KAT Complexes In Vitro and In Vivo","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Peptidase Inhibition and Analysis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre de Recherche Industrielle du Québec; Université Laval; Centre hospitalier de l'Université Laval; Quebec - Clinical Research Organization in Cancer; Centre hospitalier universitaire de Québec","funders":"","keywords":"Acetylation; Lysine; Biochemistry; In vitro; Chemistry; In vivo; Computational biology; Combinatorial chemistry; Amino acid; Biology; Genetics","score_opus":0.02645830917709669,"score_gpt":0.3764946286452052,"score_spread":0.35003631946810854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946029388","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9094259,0.0007122307,0.089270614,0.00031129597,0.000005102197,0.00012688446,0.000009481629,0.000003608215,0.00013487645],"genre_scores_gemma":[0.91371316,0.000042655094,0.085921235,0.00025460834,0.0000021296134,0.000006551265,0.00003962805,0.0000044828935,0.000015565593],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986541,0.00058054103,0.00031958194,0.00024137163,0.00008427189,0.00012011345],"domain_scores_gemma":[0.99965155,0.000063257605,0.00007357022,0.00014018329,0.000039575,0.000031836877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012833766,0.00008785801,0.00054596504,0.0007780174,0.0000053364993,0.0000027046406,0.0000266256,0.000093088216,0.000057205063],"category_scores_gemma":[0.00017025167,0.000078387064,0.000059711445,0.0008261473,0.000067702094,0.000014178846,0.000030883584,0.00009441773,2.8772158e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008158951,0.0000571591,0.102477334,0.000024120283,0.00011974435,0.0000036129052,0.000055629287,0.000037664224,0.89474577,0.00005021592,0.0000023094267,0.0023448819],"study_design_scores_gemma":[0.001790436,0.00008601091,0.054609932,0.00008839172,0.00024131352,0.0000023249254,0.00009824032,0.016717589,0.9258103,0.0003422199,0.00010302351,0.00011024775],"about_ca_topic_score_codex":0.0001885563,"about_ca_topic_score_gemma":0.00012221874,"teacher_disagreement_score":0.047867402,"about_ca_system_score_codex":0.000045671823,"about_ca_system_score_gemma":0.00001201502,"threshold_uncertainty_score":0.31965315},"labels":[],"label_agreement":null},{"id":"W2946110433","doi":"10.1007/978-1-4939-9488-5_6","title":"Analyses of Cholesterol and Derivatives in Ocular Tissues Using LC-MS/MS Methods","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Chemistry; Derivatization; Moiety; Electrospray ionization; Cholesterol; Chromatography; Glycerophospholipids; Membrane; Dissociation (chemistry); Mass spectrometry; Organic chemistry; Biochemistry; Phospholipid","score_opus":0.04728430548097623,"score_gpt":0.4667155874993681,"score_spread":0.41943128201839186,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946110433","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75913227,0.0014026499,0.23894611,0.000015957261,0.00013042666,0.000233246,0.0000051474635,0.000004546992,0.00012965091],"genre_scores_gemma":[0.37556025,0.000100400524,0.6241133,0.00011229525,0.00003062212,0.00001116216,0.000024049328,0.000022010578,0.000025893007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967623,0.0017899651,0.00046409,0.0005932763,0.00006590995,0.00032447858],"domain_scores_gemma":[0.99918485,0.00007667069,0.00016303253,0.00046734518,0.00005432895,0.00005379919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010794221,0.00025717233,0.0005786046,0.00025243888,0.000018037177,0.000010242347,0.00023465136,0.00037334408,0.00003070434],"category_scores_gemma":[0.00025440703,0.00022735921,0.000110467176,0.0002879882,0.00021454012,0.0000065170084,0.00023280576,0.00018204848,5.6873944e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004072733,0.000035458495,0.036697477,0.00004614879,0.00005252127,0.000004735402,0.000089000714,0.00010640383,0.95167226,0.000096655094,4.1212525e-7,0.011158177],"study_design_scores_gemma":[0.00072514714,0.00023285,0.008878093,0.000030436999,0.00004221993,0.000023018354,0.000080966434,0.00012871595,0.98833144,0.00042711664,0.0008586329,0.0002413913],"about_ca_topic_score_codex":0.0002351035,"about_ca_topic_score_gemma":0.000022325568,"teacher_disagreement_score":0.3851672,"about_ca_system_score_codex":0.000014350933,"about_ca_system_score_gemma":0.000045250123,"threshold_uncertainty_score":0.927144},"labels":[],"label_agreement":null},{"id":"W2946712570","doi":"10.1007/978-1-4939-9220-1_6","title":"Design Strategy to Access siRNA-Encapsulating DNA “Nanosuitcases” That Can Conditionally Release Their Cargo","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Natural Sciences and Engineering Research Council of Canada; Canada Research Chairs","keywords":"Oligonucleotide; DNA nanotechnology; DNA; Base pair; DNA origami; Nanotechnology; Computational biology; Scaffold; Chemistry; Computer science; Biology; Materials science; Biochemistry","score_opus":0.04469293784680911,"score_gpt":0.40400053203755587,"score_spread":0.35930759419074676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946712570","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35784414,0.00022672527,0.640758,0.000165023,0.00009780663,0.00045516336,0.00003871532,0.000039841492,0.00037463763],"genre_scores_gemma":[0.64979565,0.00003868365,0.34847713,0.0012547288,0.000048072397,0.00004054623,0.00018913898,0.000033257955,0.00012282343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99663424,0.0013777604,0.00042924535,0.00090212404,0.00011952148,0.00053710636],"domain_scores_gemma":[0.99869335,0.00013920276,0.00019766239,0.0006927282,0.00013843302,0.0001386504],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010808179,0.0003647797,0.00047127213,0.00023146001,0.000072343544,0.000048839982,0.00052282505,0.00041392085,0.000016827984],"category_scores_gemma":[0.0003730233,0.00031581728,0.0001843674,0.00037180298,0.00012275376,0.000007451636,0.00032115195,0.00023023308,0.000004264333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008806696,0.000043153406,0.0021482399,0.000010440325,0.00007074415,0.000019308854,0.0000162391,0.00105223,0.9854032,0.00030740464,0.000066986,0.010773985],"study_design_scores_gemma":[0.00036661944,0.0005716317,0.0005625701,0.000026778287,0.000019452213,0.000029316523,0.00006197217,0.0003091737,0.9918005,0.004794548,0.0010224981,0.00043495104],"about_ca_topic_score_codex":0.00006774396,"about_ca_topic_score_gemma":0.00005464193,"teacher_disagreement_score":0.29228085,"about_ca_system_score_codex":0.00005508975,"about_ca_system_score_gemma":0.00013946905,"threshold_uncertainty_score":0.99992937},"labels":[],"label_agreement":null},{"id":"W2946898408","doi":"10.1007/978-1-4939-9469-4_14","title":"Cellular Force Microscopy to Measure Mechanical Forces in Plant Cells","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Stiffness; Indentation; Microscopy; Atomic force microscopy; Materials science; Nanotechnology; Kelvin probe force microscope; Biomedical engineering; Biological system; Mechanics; Composite material; Optics; Physics; Engineering; Biology","score_opus":0.014646787343010307,"score_gpt":0.343468429667927,"score_spread":0.32882164232491673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2946898408","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34143603,0.0005314422,0.6557034,0.0001287717,0.0007505339,0.0005367089,0.000024882453,0.0000091591355,0.0008790764],"genre_scores_gemma":[0.45214206,0.00010282026,0.5446957,0.0016514824,0.000101400234,0.0001299125,0.0003025265,0.000076688244,0.0007974555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99744916,0.0006872409,0.00045040052,0.0007828824,0.00009272924,0.00053759397],"domain_scores_gemma":[0.9990627,0.000054580298,0.00008699543,0.00062618265,0.0000522585,0.00011729236],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011577444,0.00027362155,0.00038974133,0.00023792195,0.000029354547,0.000020315269,0.00042420294,0.00044248512,0.00012934311],"category_scores_gemma":[0.00017615399,0.00027256378,0.0001671379,0.00027626957,0.000029074637,0.000003949144,0.0002902978,0.00030420482,0.000047467332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011944038,0.000073940144,0.00027525247,0.000012895701,0.00002597483,0.0000153518,0.00003393148,0.00015463441,0.9955611,0.00266867,0.00008896584,0.00096979184],"study_design_scores_gemma":[0.0006037628,0.0004997467,0.000014904525,0.000029538704,0.000008477908,0.000012569754,0.00006769802,0.00068725296,0.9678122,0.0014438138,0.028504333,0.00031572423],"about_ca_topic_score_codex":0.00007676597,"about_ca_topic_score_gemma":0.00011050326,"teacher_disagreement_score":0.11100774,"about_ca_system_score_codex":0.000048775117,"about_ca_system_score_gemma":0.000063767955,"threshold_uncertainty_score":0.99997264},"labels":[],"label_agreement":null},{"id":"W2947411942","doi":"10.1007/978-1-4939-9473-1_1","title":"Isolation and Culture of Human Keratinocytes","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wound Healing and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Université Laval","funders":"","keywords":"Keratinocyte; Subculture (biology); Isolation (microbiology); Cell culture; Keratin; Cell biology; Stem cell; Tissue culture; Biology; Pathology; Medicine; In vitro; Bioinformatics; Microbiology; Biochemistry; Genetics","score_opus":0.029317645239544464,"score_gpt":0.4541661108797193,"score_spread":0.42484846564017487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947411942","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92386055,0.000990596,0.0722381,0.000098297096,0.000050315797,0.0001747875,0.0000011636319,0.0000085975325,0.0025775828],"genre_scores_gemma":[0.47148043,0.00001566031,0.5281554,0.00009335723,0.0000072481953,0.000003487364,0.00001590721,0.000003793028,0.00022471139],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99945825,0.00019792934,0.00012290917,0.0001251685,0.000021879592,0.00007386478],"domain_scores_gemma":[0.9997792,0.000035237663,0.000035538433,0.00010969281,0.00002140056,0.00001892487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023089939,0.000053582116,0.00018729974,0.000053278134,0.000010835585,0.0000014306011,0.000016784978,0.00009890407,0.000020692585],"category_scores_gemma":[0.000051912837,0.00004024281,0.000022724298,0.0000540166,0.000032060634,0.000005455289,0.0000139034155,0.00007283971,0.0000019205293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015492975,0.000028052595,0.18036762,0.000027231088,0.000020057149,0.0000031672075,0.00022806595,8.6167717e-7,0.81456363,0.001989041,0.0000027646686,0.002754009],"study_design_scores_gemma":[0.0037799422,0.002331495,0.086383514,0.00012463707,0.00009451842,0.000049732378,0.0001753625,0.00044440082,0.8747948,0.030682238,0.00097639475,0.00016297087],"about_ca_topic_score_codex":0.000043728738,"about_ca_topic_score_gemma":0.0000020140826,"teacher_disagreement_score":0.4559173,"about_ca_system_score_codex":0.000011239563,"about_ca_system_score_gemma":0.0000096384765,"threshold_uncertainty_score":0.16410542},"labels":[],"label_agreement":null},{"id":"W2947554042","doi":"10.1007/978-1-4939-9473-1_7","title":"Isolation and Culture of Human Dermal Microvascular Endothelial Cells","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Fonds de Recherche du Québec - Santé; Centre Hospitalier Universitaire de Québec","keywords":"Angiogenesis; Umbilical vein; Tissue engineering; Isolation (microbiology); Human skin; Biology; Endothelial stem cell; Pathology; Cell biology; Medicine; Biomedical engineering; Bioinformatics; In vitro; Cancer research; Biochemistry; Genetics","score_opus":0.010859280150641581,"score_gpt":0.34465796127615617,"score_spread":0.3337986811255146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947554042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68655825,0.0030753096,0.30946168,0.000016587646,0.00014502725,0.00018490259,0.0000120743525,0.0000040296427,0.00054213044],"genre_scores_gemma":[0.5459354,0.0003195943,0.4529346,0.00028224595,0.000083370156,0.000017656423,0.000067587534,0.00002686145,0.00033269948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987704,0.00039033557,0.00023795405,0.00036407492,0.000043141175,0.00019404959],"domain_scores_gemma":[0.9995295,0.000013606922,0.0000923174,0.00028612098,0.000045834593,0.000032662818],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043510707,0.00014322322,0.00024130271,0.00006221022,0.000022121747,0.000005018929,0.00013549918,0.00028589816,0.00003128863],"category_scores_gemma":[0.000027363507,0.0001300001,0.00012433392,0.000076373486,0.00010255263,0.0000019409636,0.00011352979,0.00007777933,0.0000022137517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026240206,0.000022629336,0.010719208,0.000022976777,0.00004704399,0.0000012125529,0.00006128289,0.00002499024,0.9862941,0.0004085853,0.000029898569,0.0023418483],"study_design_scores_gemma":[0.00058565737,0.00028637773,0.00062640035,0.000009007959,0.000016416705,0.0000076247766,0.00003603587,0.000040190283,0.98917466,0.00055274164,0.00851354,0.00015135828],"about_ca_topic_score_codex":0.00003278675,"about_ca_topic_score_gemma":0.00000632819,"teacher_disagreement_score":0.14347292,"about_ca_system_score_codex":0.000008147193,"about_ca_system_score_gemma":0.000023005494,"threshold_uncertainty_score":0.530125},"labels":[],"label_agreement":null},{"id":"W2947584576","doi":"10.1007/978-1-4939-9516-5_14","title":"Peptide-Modified Gemini Surfactants: Preparation and Characterization for Gene Delivery","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Gene delivery; Cationic polymerization; Biocompatibility; Pulmonary surfactant; Chemistry; Transfection; Genetic enhancement; Nanotechnology; Biophysics; Gene; Biochemistry; Materials science; Biology; Organic chemistry","score_opus":0.018719872833330892,"score_gpt":0.3589180006929489,"score_spread":0.340198127859618,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947584576","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6285095,0.00024546168,0.37056956,0.00002889017,0.00016011728,0.00031882897,0.000023692024,0.0000059134604,0.00013801186],"genre_scores_gemma":[0.80691504,0.00036035612,0.19079736,0.00050840474,0.00006811777,0.000089974805,0.0007914241,0.000025427893,0.00044391843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986588,0.00029656454,0.0002712368,0.00049898186,0.00003748201,0.00023696138],"domain_scores_gemma":[0.9994338,0.00004302691,0.00010171818,0.00029495938,0.000087486595,0.000039020408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005324053,0.00016276956,0.00021951123,0.0000824552,0.000028168852,0.000016809865,0.000137215,0.00027683194,0.00001119019],"category_scores_gemma":[0.00011903904,0.00016235725,0.00006788046,0.00007044589,0.00004991455,0.0000065652357,0.000094484814,0.00006722661,0.000004757682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023123581,0.000022966808,0.0037629614,0.00001649066,0.00003341887,8.9955523e-7,0.00004124363,0.000042667736,0.98805237,0.00018077607,0.000013770518,0.0076011727],"study_design_scores_gemma":[0.00069132494,0.0006825073,0.0038727245,0.000011054093,0.000014257541,0.000010409903,0.000024247496,0.0012901921,0.9885868,0.00056194107,0.004022576,0.00023198097],"about_ca_topic_score_codex":0.000011687756,"about_ca_topic_score_gemma":0.0000074965155,"teacher_disagreement_score":0.17977221,"about_ca_system_score_codex":0.000012952833,"about_ca_system_score_gemma":0.000040011335,"threshold_uncertainty_score":0.6620736},"labels":[],"label_agreement":null},{"id":"W2947890590","doi":"10.1007/978-1-4939-9469-4_18","title":"Quantifying Plant Growth and Cell Proliferation with MorphoGraphX","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Confocal; Confocal microscopy; Sepal; Software; Arabidopsis; Fluorescence microscope; Microscope; Biology; Plant cell; Arabidopsis thaliana; Scanner; Image analysis; Cell biology; Computer vision; Artificial intelligence; Image processing; Botany; Computer science; Fluorescence; Image (mathematics); Gene; Optics; Physics; Digital image processing; Biochemistry","score_opus":0.01316974367754116,"score_gpt":0.3363719368503147,"score_spread":0.32320219317277354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947890590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51737076,0.000624315,0.4806842,0.000031959982,0.000014123265,0.00023570211,0.0000014402137,0.000014631799,0.0010228683],"genre_scores_gemma":[0.54052854,0.00017233494,0.45885044,0.0002632227,0.0000138924715,0.000033106626,0.00007562688,0.000019009332,0.000043819484],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985081,0.0004856856,0.00020454763,0.0005160523,0.000054016684,0.00023160347],"domain_scores_gemma":[0.9994546,0.000029027942,0.000085714324,0.0003467298,0.000042914526,0.00004100139],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057024544,0.00017299711,0.00023481793,0.00018112773,0.000024684372,0.000019647694,0.00014025744,0.0002026996,0.000007871214],"category_scores_gemma":[0.00006303617,0.00014544216,0.000055847737,0.00019854732,0.0000883244,0.0000036320566,0.00011099299,0.00013378532,0.0000013955108],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005381497,0.000029014518,0.107440844,0.00002407934,0.00002657227,0.00000836022,0.00001742196,0.0000065011513,0.89116675,0.00030455526,0.000017508271,0.0009045758],"study_design_scores_gemma":[0.00040543315,0.00041250946,0.0009973008,0.000009119938,0.000021191829,0.000027463506,0.000027829967,0.00017860865,0.9963827,0.00030540096,0.0010261505,0.00020628885],"about_ca_topic_score_codex":0.000045945333,"about_ca_topic_score_gemma":0.000026024614,"teacher_disagreement_score":0.10644355,"about_ca_system_score_codex":0.0000054319144,"about_ca_system_score_gemma":0.00002520164,"threshold_uncertainty_score":0.5930959},"labels":[],"label_agreement":null},{"id":"W2947986117","doi":"10.1007/978-1-4939-9484-7_18","title":"Impact of Culture Conditions on Neutral Lipid Production by Oleaginous Yeast","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; University of California, Davis","keywords":"Yeast; Aeration; Biodiesel; Food science; Biodiesel production; Glycerol; Carotenoid; Biofuel; Polyunsaturated fatty acid; Chemistry; Yeast extract; Carbon fibers; Biology; Botany; Fermentation; Biochemistry; Fatty acid; Biotechnology; Organic chemistry; Catalysis","score_opus":0.006803561603908225,"score_gpt":0.34273950424197097,"score_spread":0.33593594263806276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2947986117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9719364,0.0004547716,0.026225882,0.000057368226,0.00070211926,0.00026416092,0.000053720654,0.000014230377,0.0002913473],"genre_scores_gemma":[0.95935863,0.0001229028,0.03921698,0.00006897734,0.00022227557,0.000019652196,0.00034481022,0.000025011701,0.0006207307],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987742,0.0003073511,0.00021999265,0.0004370827,0.00003652533,0.00022489007],"domain_scores_gemma":[0.99942446,0.0000036462097,0.00008609187,0.00038745604,0.00005977327,0.00003855427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003389047,0.00017168648,0.00023435942,0.00009574209,0.000016860553,0.00000443475,0.00013248734,0.00024088871,0.000020099673],"category_scores_gemma":[0.00015236664,0.00014470084,0.00014381683,0.0001822841,0.00007167945,0.0000024587252,0.000036041685,0.00016650709,0.000008013558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000574222,0.00011032004,0.0016019364,0.000014325514,0.0000545717,3.814522e-7,0.000024183237,0.0017701157,0.9939081,0.00018947627,0.00072580593,0.0015433664],"study_design_scores_gemma":[0.00030874374,0.00077173254,0.0019870976,0.0000133500025,0.000011522631,0.000021538974,0.000010302048,0.000013003202,0.98926944,0.00009876961,0.0073302286,0.00016429818],"about_ca_topic_score_codex":0.000037201844,"about_ca_topic_score_gemma":0.0000017803559,"teacher_disagreement_score":0.012991098,"about_ca_system_score_codex":0.00002119369,"about_ca_system_score_gemma":0.000031383082,"threshold_uncertainty_score":0.59007293},"labels":[],"label_agreement":null},{"id":"W2949705259","doi":"10.1007/978-1-4939-9562-2_1","title":"Optimal Preparation of Tissue Sections for Light-Microscopic Analysis of Phloem Anatomy","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Diversity and Evolution","field":"Agricultural and Biological Sciences","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"AGE-WELL","keywords":"Phloem; Plant tissue; Anatomy; Process (computing); Herbaceous plant; Biology; Botany; Biomedical engineering; Computer science; Medicine","score_opus":0.0191320465295374,"score_gpt":0.3697369388600641,"score_spread":0.3506048923305267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949705259","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9080231,0.00007726771,0.09133754,0.000079745005,0.00007199878,0.00017597317,0.000071087285,0.0000059662734,0.00015731918],"genre_scores_gemma":[0.8228623,0.0000103441635,0.1768338,0.00002906756,0.000009540969,0.0000075042235,0.0001812177,3.3858478e-7,0.00006583432],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99931425,0.00022567163,0.0001631297,0.00016307447,0.00003079964,0.000103091814],"domain_scores_gemma":[0.99963206,0.00015455401,0.000094533454,0.000044390046,0.00006042275,0.000014066894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037461735,0.000052653486,0.00022808329,0.00006635225,0.000022925014,0.0000024228182,0.00010298214,0.00011715891,0.00006268448],"category_scores_gemma":[0.000063888714,0.000026330508,0.000092694216,0.00055325596,0.000028153554,0.000023300156,0.000031201325,0.000036033198,0.0000012731059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003523641,0.0000317073,0.012452227,0.00000642953,0.00007459231,1.5382707e-7,0.00004163113,0.00073935586,0.984302,0.00069863553,0.000008985362,0.0016090375],"study_design_scores_gemma":[0.00014022748,0.00045545318,0.027606087,0.0000053642525,0.00013454763,7.061014e-7,0.00009610677,0.002556864,0.9649142,0.0005303406,0.003478999,0.000081122256],"about_ca_topic_score_codex":0.00016425907,"about_ca_topic_score_gemma":0.00018157785,"teacher_disagreement_score":0.08549626,"about_ca_system_score_codex":0.000012274171,"about_ca_system_score_gemma":0.0000046673654,"threshold_uncertainty_score":0.10737269},"labels":[],"label_agreement":null},{"id":"W2949710696","doi":"10.1007/978-1-4939-9562-2_7","title":"Super-Resolution Microscopy of Phloem Proteins","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Phloem; Resolution (logic); Microscopy; Biophysics; Biology; Computer science; Artificial intelligence; Botany; Optics; Physics","score_opus":0.010317181745520704,"score_gpt":0.3938945493780545,"score_spread":0.3835773676325338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2949710696","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24394025,0.000883555,0.7540862,0.000033951957,0.00011960511,0.0004998445,0.000012070442,0.00001793508,0.00040658383],"genre_scores_gemma":[0.05159196,0.00009077978,0.9478166,0.00017411166,0.00002391131,0.000066902416,0.00006524912,0.000033278833,0.00013720793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980789,0.00058247015,0.00037325354,0.0005398855,0.000060465936,0.0003650576],"domain_scores_gemma":[0.99908817,0.000029909646,0.00012810068,0.00063225144,0.00008042998,0.000041125157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007058443,0.0002056628,0.00032528277,0.00013361927,0.00001883664,0.000004707714,0.00035781343,0.0003815889,0.000031105817],"category_scores_gemma":[0.00028934958,0.00020486521,0.000113210685,0.00020079233,0.00022129007,0.000003574375,0.00022798538,0.00018074176,0.000007147184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008688172,0.000058883732,0.008635986,0.000028408753,0.000015899921,0.0000018402922,0.000021367974,0.000035320954,0.98733443,0.0010215328,0.000022586948,0.00273685],"study_design_scores_gemma":[0.0003865109,0.0005358116,0.000288221,0.00002799959,0.000005438313,0.000008369625,0.000022846054,0.000060250914,0.99071646,0.001817447,0.0059226025,0.00020806958],"about_ca_topic_score_codex":0.000034579905,"about_ca_topic_score_gemma":0.0000075388016,"teacher_disagreement_score":0.1937304,"about_ca_system_score_codex":0.000029874953,"about_ca_system_score_gemma":0.00006568914,"threshold_uncertainty_score":0.8354161},"labels":[],"label_agreement":null},{"id":"W2952286603","doi":"10.1007/978-1-4939-9566-0_19","title":"Culture of Mink Preimplantation Embryos","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Organ and Tissue Transplantation Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Cegep de Saint Hyacinthe","funders":"","keywords":"Mink; Blastocyst; Biology; Diapause; Embryo; Zoology; Embryogenesis; Andrology; Cell biology; Ecology; Medicine; Larva","score_opus":0.027591618917372905,"score_gpt":0.4649107616904296,"score_spread":0.4373191427730567,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2952286603","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49179447,0.0007150076,0.4934408,0.00023534485,0.00016647977,0.0006338968,0.000012997276,0.000021795477,0.0129791945],"genre_scores_gemma":[0.24362488,0.000116131516,0.7545736,0.0002258034,0.000015716143,0.00001047223,0.00007861827,0.0000124764,0.0013423346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908894,0.0003714845,0.0001793212,0.00015918205,0.000068540874,0.00013252636],"domain_scores_gemma":[0.99963945,0.0000826647,0.00003764175,0.00015768154,0.000047716057,0.00003483928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040296747,0.00006477959,0.00021851451,0.000133664,0.000005560895,0.000001644868,0.000060090013,0.00012962057,0.0002956059],"category_scores_gemma":[0.0000781233,0.000052272353,0.000041967764,0.0001858527,0.000046137928,0.000010470587,0.000012301089,0.00014669898,0.000034396853],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106640706,0.000035359535,0.02423769,0.00015158094,0.000024095865,0.000023418579,0.00033835467,0.0000035002452,0.96699446,0.0021069746,0.000011907801,0.0059660245],"study_design_scores_gemma":[0.0013896759,0.00040545425,0.014119987,0.00004789367,0.000024292342,0.000069263864,0.00011670996,0.00010244192,0.9810296,0.0012546948,0.0013705866,0.00006934825],"about_ca_topic_score_codex":0.000021402848,"about_ca_topic_score_gemma":0.0000017903009,"teacher_disagreement_score":0.26113275,"about_ca_system_score_codex":0.000011547557,"about_ca_system_score_gemma":0.00003601697,"threshold_uncertainty_score":0.3236677},"labels":[],"label_agreement":null},{"id":"W29530995","doi":"10.1007/978-1-62703-281-0_15","title":"Array Comparative Genomic Hybridization in Osteosarcoma","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Sarcoma Diagnosis and Treatment","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Osteosarcoma; Comparative genomic hybridization; Biology; Sarcoma; Genomics; Retinoblastoma; Genetics; Cancer research; Gene; Genome; Pathology; Medicine","score_opus":0.12425540806511616,"score_gpt":0.4936755883576554,"score_spread":0.36942018029253926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W29530995","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00021862358,0.95431226,0.04231706,0.000050505827,0.00017812569,0.0020437157,0.0000122536285,0.000019691479,0.0008477581],"genre_scores_gemma":[0.000012606012,0.65279377,0.34598872,0.00010199794,0.00003168286,0.00073827454,0.0002741358,0.00003357782,0.000025251542],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951896,0.0028707015,0.00085084053,0.00064620253,0.0000685525,0.00037410893],"domain_scores_gemma":[0.9985346,0.00056485616,0.0002747604,0.00050332036,0.00004026871,0.000082198145],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006819827,0.00045264777,0.0027184375,0.00061203673,0.000017285694,0.0000111410845,0.00017443688,0.0004510659,0.00010126238],"category_scores_gemma":[0.00017251747,0.00034051389,0.00036092004,0.00047000617,0.000101051235,0.0000143580255,0.000078858626,0.00046209662,0.000106622814],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000075639778,0.00029561683,0.001106444,0.0010470402,0.00019762876,0.00021822102,0.000058914917,0.0000010980245,0.0015722315,0.00059065275,0.000022199065,0.9948824],"study_design_scores_gemma":[0.0013879983,0.00031454908,0.00046261316,0.0037661714,0.0006679464,0.00026718236,0.00002845161,0.000016734768,0.0021101215,0.0010644615,0.9894201,0.0004936629],"about_ca_topic_score_codex":0.000097419004,"about_ca_topic_score_gemma":0.000014729045,"teacher_disagreement_score":0.9943887,"about_ca_system_score_codex":0.0003794389,"about_ca_system_score_gemma":0.00018296935,"threshold_uncertainty_score":0.9999047},"labels":[],"label_agreement":null},{"id":"W2953439279","doi":"10.1007/978-1-4939-9074-0_13","title":"Looking for Darwin in Genomic Sequences: Validity and Success Depends on the Relationship Between Model and Data","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Computer science; Inference; Population; Set (abstract data type); Selection (genetic algorithm); Data science; Artificial intelligence","score_opus":0.15064712764366378,"score_gpt":0.42640298432330653,"score_spread":0.27575585667964275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953439279","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8842215,0.0010623753,0.11384903,0.00023959497,0.000049190166,0.00035158498,0.00007655889,0.0000013508187,0.00014883153],"genre_scores_gemma":[0.87978745,0.00011391976,0.119717926,0.00021564355,0.000029016917,0.000033548564,0.00007414992,0.000013821019,0.000014557818],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9984749,0.0005001125,0.00022196923,0.0005524041,0.000031604002,0.00021904332],"domain_scores_gemma":[0.9987721,0.0005872821,0.000068471265,0.000527782,0.000017041772,0.000027353473],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018982956,0.00014261196,0.00021450719,0.000062610336,0.000057244404,0.000015576496,0.00033371258,0.00017828436,0.0000011905564],"category_scores_gemma":[0.0005468408,0.000113172726,0.000026268093,0.000063176885,0.00011877266,0.0000012697708,0.00045326492,0.00013066412,3.2122142e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024193947,0.000006923734,0.52588737,0.000014284393,0.000017559656,4.3178235e-7,0.00004473798,0.00036290885,0.46956238,0.0023670392,0.0000037651882,0.0017083845],"study_design_scores_gemma":[0.0025718797,0.0008827626,0.73305,0.000060247316,0.000091866226,0.00001476749,0.000255317,0.015027337,0.11143589,0.1334591,0.0022073353,0.00094354013],"about_ca_topic_score_codex":0.000033621473,"about_ca_topic_score_gemma":0.00005834072,"teacher_disagreement_score":0.3581265,"about_ca_system_score_codex":0.000011181828,"about_ca_system_score_gemma":0.000039010007,"threshold_uncertainty_score":0.46150497},"labels":[],"label_agreement":null},{"id":"W2953888689","doi":"10.1007/978-1-4939-9074-0_1","title":"Introduction to Genome Biology and Diversity","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Genome; Biology; Genomics; Computational biology; Diversity (politics); Evolutionary biology; Genetics; Gene; Sociology","score_opus":0.0411524124869074,"score_gpt":0.41763993035844765,"score_spread":0.3764875178715402,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2953888689","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012204062,0.7481385,0.24921446,0.00019774458,0.001016186,0.0006671671,0.00003969978,0.000017647586,0.0005865636],"genre_scores_gemma":[0.0000012362118,0.7301943,0.26903328,0.00018577366,0.00010580267,0.000023603394,0.00006105194,0.000015901376,0.0003790698],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978003,0.0010206059,0.00026046872,0.0006471009,0.000018926405,0.00025262136],"domain_scores_gemma":[0.99942666,0.00008088789,0.00010741414,0.00032265394,0.000004147106,0.000058220532],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005363377,0.00021738595,0.00074371917,0.00013816723,0.000060325023,0.000009341473,0.00025863148,0.000341094,0.00096217013],"category_scores_gemma":[0.0000968104,0.00018774206,0.00012695206,0.00024456295,0.00013092588,0.000025291627,0.0016159916,0.00030238944,0.00038511882],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000270998,0.000015739846,0.000030279285,0.0001593694,0.000027980648,0.000003155702,0.000032302065,0.000001880972,0.102273956,0.0001510549,0.00007447013,0.8972271],"study_design_scores_gemma":[0.000042321695,0.00007587816,0.00010585551,0.0000465033,0.000079386555,0.000037901962,0.0000022213305,5.913535e-7,0.000079047815,0.00023869707,0.9991039,0.00018768293],"about_ca_topic_score_codex":0.0002711884,"about_ca_topic_score_gemma":0.000025287793,"teacher_disagreement_score":0.99902946,"about_ca_system_score_codex":0.00018036691,"about_ca_system_score_gemma":0.000008736642,"threshold_uncertainty_score":0.99995106},"labels":[],"label_agreement":null},{"id":"W2954008542","doi":"10.1007/978-1-4939-9554-7_11","title":"Nicotine Self-Administration as Paradigm for Medication Discovery for Smoking Cessation: Recent Findings in Medications Targeting the Cholinergic System","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nicotinic Acetylcholine Receptors Study","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Addiction and Mental Health","funders":"","keywords":"Smoking cessation; Nicotine; Self-administration; Cholinergic; Medicine; Cholinergic system; Administration (probate law); Pharmacology; Psychiatry; Internal medicine; Political science; Pathology","score_opus":0.01420346499300661,"score_gpt":0.3719800333933832,"score_spread":0.3577765684003766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954008542","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.302041,0.0010009444,0.69132864,0.002587368,0.0007398157,0.0019644396,0.000022257655,0.000026134967,0.0002894405],"genre_scores_gemma":[0.79311746,0.00031472865,0.20348673,0.0004404678,0.00029070902,0.001220442,0.0009960321,0.000045645887,0.00008779178],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973918,0.00074602343,0.00070975797,0.0006475359,0.000120495446,0.00038439472],"domain_scores_gemma":[0.99869233,0.00038807647,0.00030036588,0.00047264638,0.00009851927,0.0000480368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037171503,0.00022012435,0.00031679112,0.000116844574,0.00009661861,0.000027453252,0.00041142316,0.00034621079,0.000008663536],"category_scores_gemma":[0.0011300674,0.00018097147,0.00011982685,0.00028045726,0.00007036523,0.000011189858,0.00010623502,0.00019820276,0.0000020765428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020625796,0.00022810535,0.016364375,0.00016942546,0.00016947009,2.5978787e-7,0.0002960694,0.00045214957,0.9556614,0.022944337,0.0003290704,0.0031790764],"study_design_scores_gemma":[0.004192811,0.00087670743,0.0007144918,0.000093272625,0.00012227177,0.000026088217,0.000923222,0.005200841,0.9158089,0.0026162306,0.068863094,0.00056205795],"about_ca_topic_score_codex":0.00002019161,"about_ca_topic_score_gemma":0.000027274875,"teacher_disagreement_score":0.49107647,"about_ca_system_score_codex":0.00012176618,"about_ca_system_score_gemma":0.00024297593,"threshold_uncertainty_score":0.73798025},"labels":[],"label_agreement":null},{"id":"W2954515343","doi":"10.1007/978-1-0716-0239-3_23","title":"Network-Based Approaches for Multi-omics Integration","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Environmental Health Sciences; National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Cancer Institute","keywords":"Subnetwork; Omics; Identification (biology); Computer science; Section (typography); Data science; Bioinformatics; Biology; Computer network; Ecology","score_opus":0.12260246646198482,"score_gpt":0.41458151126385917,"score_spread":0.29197904480187437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2954515343","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[9.628233e-8,0.48313612,0.5156458,0.000023165981,0.00023534051,0.000838678,0.000051088475,0.000009085261,0.000060623817],"genre_scores_gemma":[5.4415466e-7,0.40447083,0.59225076,0.00037251003,0.00026072576,0.00042157533,0.0021306078,0.00006491675,0.000027494296],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967151,0.0010069148,0.00092820334,0.0007580022,0.000047214362,0.0005445118],"domain_scores_gemma":[0.9986661,0.0001312123,0.00046743493,0.00058573164,0.000047024336,0.0001024931],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013817985,0.00057866034,0.0014431743,0.000117558,0.000058454665,0.000032210206,0.00056790706,0.0014288651,0.0000031419634],"category_scores_gemma":[0.0003353526,0.0005037259,0.0006697893,0.00025306345,0.00013368313,0.00000165044,0.00022153648,0.0004701343,0.000004240629],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029426814,0.000034963774,0.0000013631638,0.0011029675,0.00012696016,0.0000021902529,0.000008991411,0.0003338834,0.0005581032,0.0026010133,0.00021437882,0.99498576],"study_design_scores_gemma":[0.0005334305,0.00026656737,1.3340562e-7,0.00037432095,0.00021478684,0.000009919014,0.0000068699655,0.01687653,0.0004256753,0.0019014053,0.97882295,0.0005674374],"about_ca_topic_score_codex":0.0000029576822,"about_ca_topic_score_gemma":0.000010019621,"teacher_disagreement_score":0.9944183,"about_ca_system_score_codex":0.00005584862,"about_ca_system_score_gemma":0.00032233793,"threshold_uncertainty_score":0.9998675},"labels":[],"label_agreement":null},{"id":"W2955026752","doi":"10.1007/978-1-4939-9492-2_7","title":"Single Cell Fluorescence Ratio Image Analysis for Studying ESCRT Function in Receptor Trafficking","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"ESCRT; Endosome; Endocytosis; Cell biology; Integrin; Cell; Chemistry; Downregulation and upregulation; Ubiquitin; Biology; Biochemistry; Intracellular; Gene","score_opus":0.020002571042274386,"score_gpt":0.3134083362565372,"score_spread":0.2934057652142628,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955026752","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42466536,0.00030912814,0.5743569,0.000021639598,0.00019781115,0.0003270289,0.0000047439157,0.0000073578894,0.000109990615],"genre_scores_gemma":[0.6385049,0.00003404599,0.3594895,0.00009201725,0.000059521757,0.00006664781,0.0016362781,0.000025980693,0.000091116715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980856,0.00048718826,0.0003939475,0.00063216983,0.000064357235,0.00033673036],"domain_scores_gemma":[0.9994024,0.000050235107,0.00010809066,0.00034638183,0.000052914875,0.000039984312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011741063,0.00019341338,0.00034504457,0.00029322947,0.00003236169,0.00002015029,0.00017524677,0.0002972811,0.000043190343],"category_scores_gemma":[0.00007235159,0.00020348903,0.00022600111,0.00048997434,0.00005164915,0.0000058666533,0.000041304625,0.00014197665,0.0000040070368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017681728,0.0001096272,0.039118107,0.000026000193,0.000070009795,0.0000018817858,0.0000798212,0.0007285818,0.95684737,0.00013133316,0.0000021001788,0.0027083536],"study_design_scores_gemma":[0.0011878777,0.000573138,0.003573782,0.000010865952,0.00010292139,8.547203e-7,0.00013361855,0.002714823,0.9861752,0.00017150042,0.005039433,0.00031600965],"about_ca_topic_score_codex":0.000026679294,"about_ca_topic_score_gemma":0.000068370355,"teacher_disagreement_score":0.21486744,"about_ca_system_score_codex":0.000037244525,"about_ca_system_score_gemma":0.000034909845,"threshold_uncertainty_score":0.82980424},"labels":[],"label_agreement":null},{"id":"W2955105575","doi":"10.1007/978-1-4939-9593-6_14","title":"Visualizing Poxvirus Replication and Recombination Using Live-Cell Imaging","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Vaccinia; Context (archaeology); Biology; DNA; DNA replication; Replication (statistics); Fluorescence microscope; Computational biology; Cell biology; Virology; Fluorescence; Genetics; Physics; Gene","score_opus":0.02914295972323013,"score_gpt":0.41877743123001765,"score_spread":0.38963447150678754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955105575","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70176613,0.006291945,0.28930688,0.00012385473,0.00035692714,0.00036044285,0.000004975982,0.000039425224,0.0017493884],"genre_scores_gemma":[0.7256516,0.00023878194,0.27288476,0.00053638086,0.000015079662,0.00003133919,0.00008889281,0.000036097947,0.0005170427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99702954,0.0017822637,0.0002618255,0.0005221608,0.00001961079,0.00038457764],"domain_scores_gemma":[0.9991746,0.0002574208,0.00010212403,0.00039442684,0.000047986592,0.00002343174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001789541,0.00013714471,0.00024700447,0.00025735417,0.0000648654,0.000013766941,0.00016568828,0.00021521754,0.00015027291],"category_scores_gemma":[0.00036983265,0.0001343203,0.000046217134,0.00016727007,0.00013096683,0.00007415148,0.0001681255,0.00030669034,0.00010722536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035278157,0.00003334893,0.013769036,0.0000139824215,0.000014712502,0.000003486835,0.00011013017,0.0000030126625,0.9287552,0.0019184247,0.0000074042273,0.055335958],"study_design_scores_gemma":[0.0012897591,0.000120472425,0.0020709673,0.000025597272,0.000012831926,0.000066178975,0.00014185203,0.000996444,0.98153526,0.006666807,0.0068481755,0.00022565201],"about_ca_topic_score_codex":0.00029599087,"about_ca_topic_score_gemma":0.0000040739205,"teacher_disagreement_score":0.055110306,"about_ca_system_score_codex":0.000059502498,"about_ca_system_score_gemma":0.000039049108,"threshold_uncertainty_score":0.5477423},"labels":[],"label_agreement":null},{"id":"W2955345137","doi":"10.1007/978-1-4939-9554-7_32","title":"Genetic Studies of Tic Disorders and Tourette Syndrome","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Obsessive-Compulsive Spectrum Disorders","field":"Psychology","cited_by":51,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Neurological Institute and Hospital; McGill University; Institut Universitaire en Santé Mentale de Québec","funders":"","keywords":"Tics; Genome-wide association study; Genetic association; Tourette syndrome; Candidate gene; Genetic architecture; Twin study; Attention deficit hyperactivity disorder; Anxiety; Family aggregation; Psychiatry; Psychology; Medicine; Genetics; Biology; Single-nucleotide polymorphism; Population; Gene; Genotype; Quantitative trait locus","score_opus":0.05934550229494405,"score_gpt":0.4828801322597853,"score_spread":0.42353462996484126,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955345137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00028251103,0.96019936,0.03609114,0.000050073064,0.0012449455,0.0012337524,0.000023210923,0.00002329404,0.00085171155],"genre_scores_gemma":[0.00001950007,0.8722818,0.12713906,0.00007483002,0.00001852364,0.00019995875,0.000016549937,0.00009149525,0.00015826366],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9918629,0.005409031,0.0010082283,0.001047172,0.0000872973,0.00058539386],"domain_scores_gemma":[0.9969437,0.0014046268,0.00063680025,0.0009195328,0.00003793163,0.00005742563],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008553635,0.00062925916,0.0035173632,0.00071125134,0.000027031641,0.0000064867468,0.00055798696,0.00076449185,0.00014836968],"category_scores_gemma":[0.0005093628,0.0005375436,0.00044864314,0.0005759981,0.0007141381,0.000012653492,0.00035732306,0.0006406299,0.000050918312],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000071168774,0.00007044071,0.00037526843,0.0056320345,0.0012278165,0.00009586026,0.00022462358,0.0000020629627,0.00005766246,0.0033836316,0.00002861939,0.9888949],"study_design_scores_gemma":[0.0019799904,0.0016201137,0.0015187446,0.005774241,0.0034043342,0.0007058048,0.0005787289,0.000008580429,0.00001492606,0.043283094,0.9388424,0.0022690434],"about_ca_topic_score_codex":0.000055056033,"about_ca_topic_score_gemma":0.000017435215,"teacher_disagreement_score":0.9866258,"about_ca_system_score_codex":0.00006860263,"about_ca_system_score_gemma":0.000078718724,"threshold_uncertainty_score":0.99970764},"labels":[],"label_agreement":null},{"id":"W2955366868","doi":"10.1007/978-1-4939-9591-2_7","title":"Improved Methods for Quantifying Human Chemokine and Cytokine Biomarker Responses: Ultrasensitive ELISA and Meso Scale Electrochemiluminescence Assays","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Chemokine; Immunoassay; Immunology; Cytokine; Immune system; Biomarker; Medicine; Acquired immune system; Computational biology; Biology; Antibody","score_opus":0.02391801513267224,"score_gpt":0.4295800073347165,"score_spread":0.4056619922020443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955366868","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4022451,0.000848852,0.5962427,0.00010706873,0.00003721102,0.00040638755,0.000018107588,0.00002595049,0.00006856338],"genre_scores_gemma":[0.3401138,0.00019573324,0.6590959,0.00029580173,0.000028788232,0.000035331363,0.00011407444,0.000031248223,0.00008937724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99692935,0.0010743871,0.00043216496,0.001028401,0.00005210037,0.00048357513],"domain_scores_gemma":[0.9987784,0.0003000808,0.00019316075,0.00048375918,0.00015536771,0.00008921848],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026504684,0.00035700217,0.0005704975,0.0002012369,0.00009281706,0.000025581678,0.00016296658,0.00046718123,0.0000014821487],"category_scores_gemma":[0.0009237344,0.0003228107,0.00013673064,0.00025077723,0.00033780505,0.000006333977,0.00020160014,0.00019448512,1.4170327e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003097509,0.000037251742,0.0019379901,0.000040854076,0.00008551522,0.0000022046488,0.00002263567,1.8584561e-7,0.97314095,0.000120574005,0.000007618948,0.024294438],"study_design_scores_gemma":[0.0008641563,0.00050237577,0.00063762144,0.000029813573,0.000063215084,0.000060466453,0.00007613911,0.0007961333,0.9942478,0.0009081189,0.0014008987,0.00041327768],"about_ca_topic_score_codex":0.000025816786,"about_ca_topic_score_gemma":0.000018324678,"teacher_disagreement_score":0.06285313,"about_ca_system_score_codex":0.000028919996,"about_ca_system_score_gemma":0.00003498983,"threshold_uncertainty_score":0.9999224},"labels":[],"label_agreement":null},{"id":"W2955548485","doi":"10.1007/978-1-4939-9074-0_3","title":"A Not-So-Long Introduction to Computational Molecular Evolution","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Ottawa","funders":"","keywords":"Divergence (linguistics); Evolutionary biology; Computer science; Population; Molecular evolution; Implementation; Biology; Phylogenetics; Sociology; Demography; Philosophy; Genetics; Programming language; Gene","score_opus":0.010166606126271354,"score_gpt":0.33430057968359056,"score_spread":0.3241339735573192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955548485","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45862412,0.00059371913,0.5393457,0.0006004865,0.0003596175,0.00027480442,0.000007114875,0.0000044363346,0.00019002483],"genre_scores_gemma":[0.5656002,0.000014614843,0.4329638,0.0010124985,0.00016824639,0.000051405204,0.000063439984,0.000025075244,0.000100690464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798816,0.0005321799,0.00031733583,0.00071561744,0.00008847025,0.00035825913],"domain_scores_gemma":[0.99926615,0.000032307704,0.00007926544,0.00043624095,0.00011303354,0.00007299267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073095463,0.00021636621,0.00027258924,0.0001682078,0.000049025424,0.000016997636,0.00023030631,0.00021753556,0.00002311667],"category_scores_gemma":[0.00022849243,0.00022827921,0.00011362376,0.0002402235,0.000086144464,9.054663e-7,0.00025822883,0.00012736257,0.00003658528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007596207,0.000033987668,0.0071213837,0.000009478552,0.00006057046,0.0000034341224,0.000034680106,0.014713407,0.96747124,0.005688691,0.0000689677,0.004718198],"study_design_scores_gemma":[0.001196455,0.00095422455,0.02860311,0.0000110304345,0.000034968634,0.000047520898,0.000070529226,0.00092918304,0.91820365,0.015404299,0.03385289,0.0006921656],"about_ca_topic_score_codex":0.00003214352,"about_ca_topic_score_gemma":0.000012266116,"teacher_disagreement_score":0.1069761,"about_ca_system_score_codex":0.000051150586,"about_ca_system_score_gemma":0.00007361147,"threshold_uncertainty_score":0.9308956},"labels":[],"label_agreement":null},{"id":"W2955659257","doi":"10.1007/978-1-4939-9554-7_12","title":"The Human Laboratory and Drug Development in Alcohol Use Disorder: Recent Updates","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neurotransmitter Receptor Influence on Behavior","field":"Neuroscience","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Addiction and Mental Health; Canada Research Chairs; University of Toronto; University of New Brunswick","funders":"","keywords":"Alcohol use disorder; Medicine; Pharmacotherapy; Drug; Alcohol consumption; Pharmacology; Clinical trial; Drug development; Intensive care medicine; Alcohol; Psychiatry; Internal medicine","score_opus":0.11396602814620307,"score_gpt":0.4586722378676025,"score_spread":0.3447062097213994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2955659257","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004806549,0.9908171,0.0014729442,0.000085891115,0.0005706652,0.0021362642,0.00003402586,0.00004302854,0.000033504537],"genre_scores_gemma":[0.0000061176233,0.9495588,0.049479753,0.00041286193,0.000009793454,0.00038662783,0.000017570846,0.000068560104,0.00005991514],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9887081,0.008304593,0.0010125643,0.0011873638,0.00015367103,0.0006336995],"domain_scores_gemma":[0.9973589,0.0014280741,0.0003240308,0.0007792929,0.000032147444,0.00007752889],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019269265,0.00055817235,0.0012449268,0.00039110714,0.00013202234,0.00010297104,0.00093290256,0.00036180744,0.000029201865],"category_scores_gemma":[0.0009293454,0.00039697325,0.0001251885,0.0008038887,0.0004121644,0.000072710114,0.0003020218,0.0010226162,0.00003386903],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000029800894,0.0000462301,0.0011814015,0.00046916457,0.0000074287614,0.000053925516,0.000058612568,5.717736e-7,0.026684934,0.00045158915,0.0000060162674,0.97103715],"study_design_scores_gemma":[0.00023657642,0.000023786188,0.00009632883,0.0006035511,0.000040532545,0.000014656568,0.000004434197,6.939633e-7,0.017583322,0.00015300189,0.9808102,0.0004328671],"about_ca_topic_score_codex":0.000028106375,"about_ca_topic_score_gemma":0.000057410278,"teacher_disagreement_score":0.9808042,"about_ca_system_score_codex":0.000112719244,"about_ca_system_score_gemma":0.00022983442,"threshold_uncertainty_score":0.9998482},"labels":[],"label_agreement":null},{"id":"W2957737407","doi":"10.1007/978-1-0716-3247-5","title":"Metabolic Reprogramming","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Instituto de Salud Carlos III; School of Medicine, Stanford University; York University; Akademie Věd České Republiky; Kay Kendall Leukaemia Fund; Università degli Studi di Trento; Rosetrees Trust; Euskal Herriko Unibertsitatea; University of California, Los Angeles; Blood Cancer UK; Consejo Nacional de Investigaciones Científicas y Técnicas; Biocruces Bizkaia es el Instituto de Investigación Sanitaria; International Centre for Genetic Engineering and Biotechnology; Moffitt Cancer Center","keywords":"Reprogramming; Computer science; Biology; Genetics; Cell","score_opus":0.03656885529033815,"score_gpt":0.41349364945931977,"score_spread":0.3769247941689816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2957737407","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00050384563,0.03149333,0.75438064,0.00026507862,0.0017397547,0.0018039234,0.00011386737,0.00018571758,0.20951384],"genre_scores_gemma":[0.000016702685,0.002283262,0.37265068,0.0002852416,0.00041574353,0.00025182532,0.0013351165,0.000265115,0.6224963],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948407,0.0017167509,0.0006836787,0.0015818969,0.0002228994,0.0009540983],"domain_scores_gemma":[0.99785006,0.00014336886,0.000234505,0.0014893794,0.00012432557,0.00015833409],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0030575092,0.0005600105,0.00084884424,0.0005663725,0.000057916972,0.00003123739,0.00095691724,0.0016450862,0.000044282333],"category_scores_gemma":[0.0010882133,0.0005755918,0.00043236182,0.0003252341,0.00033894114,0.0000015144885,0.001112318,0.00084134965,0.00016611531],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048592334,0.000038697068,0.00011826781,0.000088359404,0.0002827015,0.0001986406,0.000014105108,0.000029800447,0.9328039,0.003253614,0.0033512586,0.059772056],"study_design_scores_gemma":[0.00044047242,0.00022009831,0.000027781069,0.000053571697,0.000049452137,0.000035436053,0.0000074109275,0.00003265087,0.18876323,0.013647111,0.79610664,0.00061612925],"about_ca_topic_score_codex":0.000023557614,"about_ca_topic_score_gemma":0.000034181387,"teacher_disagreement_score":0.79275537,"about_ca_system_score_codex":0.00007291606,"about_ca_system_score_gemma":0.00047279277,"threshold_uncertainty_score":0.99966955},"labels":[],"label_agreement":null},{"id":"W2960654013","doi":"10.1007/978-1-4939-9591-2_6","title":"Quantifying Human Innate Cytokine and Chemokine Responses Ex Vivo via Pattern Recognition Receptor Stimulation","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Innate immune system; Biology; Immunology; Pattern recognition receptor; Innate lymphoid cell; TLR3; Chemokine; TLR7; Immune system; CCL18; TLR4; TLR5; Cytokine; Ex vivo; Toll-like receptor; In vivo","score_opus":0.03900888117446448,"score_gpt":0.37270953375931337,"score_spread":0.3337006525848489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2960654013","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82860434,0.000803541,0.16947293,0.00015467663,0.00038814405,0.00034387998,0.00000962292,0.000045876994,0.00017700098],"genre_scores_gemma":[0.9453437,0.00010403578,0.05329998,0.00029642842,0.00002495,0.000036817175,0.0004969243,0.000033930097,0.0003632745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958366,0.0029051972,0.00048507197,0.00042385992,0.000024798597,0.0003244503],"domain_scores_gemma":[0.9990048,0.00041724092,0.00019637567,0.00029203744,0.00007489683,0.0000146544635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018635389,0.00021159419,0.0003800066,0.00038866088,0.00008231284,0.000012934327,0.00012662084,0.0004715055,0.00068771973],"category_scores_gemma":[0.00036563564,0.00020393975,0.0000642452,0.0002001373,0.00012700127,0.00008433376,0.000110435714,0.00033013933,0.00019329642],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036911533,0.000031770393,0.008067653,0.000025188567,0.000048707145,0.0000031124025,0.00016077531,0.0000038042986,0.8951928,0.00011618575,0.000009877068,0.09597099],"study_design_scores_gemma":[0.0016058866,0.00035254747,0.009008635,0.000055123302,0.000020734164,0.00003694895,0.000045409415,0.00012989898,0.98234916,0.001160002,0.004979586,0.00025609098],"about_ca_topic_score_codex":0.00010988845,"about_ca_topic_score_gemma":0.0000099335475,"teacher_disagreement_score":0.11673934,"about_ca_system_score_codex":0.000049064318,"about_ca_system_score_gemma":0.000020088573,"threshold_uncertainty_score":0.83164215},"labels":[],"label_agreement":null},{"id":"W29607698","doi":"10.1007/978-1-4939-2428-8_28","title":"Evidence-Based Decision-Making 6: Utilization of Administrative Databases for Health Services Research","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre; University of Calgary","funders":"","keywords":"Health care; Business; Health services; HRHIS; Health policy; Population health; Service (business); Quality (philosophy); Database; Knowledge management; Population; Medicine; Computer science; Environmental health; Marketing; Political science","score_opus":0.880099524266204,"score_gpt":0.7058898563470536,"score_spread":0.17420966791915038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W29607698","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009996964,0.011971094,0.97159755,0.00475617,0.0002885282,0.00097329647,0.00023156653,0.000013078759,0.00017174044],"genre_scores_gemma":[0.11780609,0.00011623482,0.8777404,0.0040129703,0.000054608652,0.00018539927,0.000057546033,0.000018984801,0.000007780166],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9915772,0.004542717,0.002790705,0.00059237087,0.0000860374,0.0004109785],"domain_scores_gemma":[0.9863517,0.011326279,0.0013754816,0.00054375955,0.00027888492,0.0001238634],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.083670944,0.000128836,0.00084667985,0.00068095693,0.000083446605,0.000019537789,0.0003505215,0.00013290014,0.00003924997],"category_scores_gemma":[0.025962498,0.00015233367,0.00009175383,0.0004853316,0.00014387432,0.00017285917,0.00008474446,0.00015003305,0.000021004342],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00086510147,0.00056451425,0.09939018,0.0030874815,0.00015189593,0.000004323368,0.0075271297,0.002818473,0.0010037399,0.82770073,0.0024442477,0.05444218],"study_design_scores_gemma":[0.0036103404,0.0030026883,0.008196102,0.005094053,0.000014470033,0.0000065781055,0.009314433,0.11319666,0.0056078234,0.7982396,0.05280777,0.00090946205],"about_ca_topic_score_codex":0.0005714655,"about_ca_topic_score_gemma":0.0002553217,"teacher_disagreement_score":0.11037819,"about_ca_system_score_codex":0.0003913009,"about_ca_system_score_gemma":0.0007383981,"threshold_uncertainty_score":0.9822422},"labels":[],"label_agreement":null},{"id":"W2962713877","doi":"10.1007/978-1-4939-9678-0_17","title":"Atomistic Simulation Tools to Study Protein Self-Aggregation","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Amorfix (Canada); University of Toronto","funders":"","keywords":"Molecular dynamics; Protein aggregation; Peptide; Amyloid fibril; Chemistry; Biophysics; Amyloid (mycology); Observable; Protein structure; Computational biology; Amyloid β; Nanotechnology; Computer science; Disease; Biology; Computational chemistry; Materials science; Physics; Biochemistry; Medicine","score_opus":0.013406387511970317,"score_gpt":0.3730310027432752,"score_spread":0.3596246152313049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2962713877","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51151794,0.00006253302,0.48689517,0.000020753943,0.00008546325,0.0012044668,0.000003914104,0.00001347801,0.00019631253],"genre_scores_gemma":[0.6113997,0.000001208445,0.38811284,0.0002059173,0.000035905323,0.00012285035,0.00004553726,0.000019273777,0.000056785768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978218,0.0008965721,0.00032039694,0.0005880873,0.00008382509,0.0002893006],"domain_scores_gemma":[0.9991514,0.00004922975,0.00008979927,0.0005668873,0.00007742897,0.0000652549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083520403,0.00020385525,0.00025146295,0.00011946991,0.0000322395,0.00002154813,0.00025175503,0.00026077247,0.000021774898],"category_scores_gemma":[0.00051057764,0.00019738602,0.00006710062,0.00024199797,0.000020891179,0.0000038797016,0.00018794097,0.00013666235,0.000021092868],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000997728,0.000089559835,0.0071454896,0.0000112068765,0.000044917513,0.000005393383,0.00007886314,0.0049869614,0.96023214,0.00068910833,0.000001048159,0.026615568],"study_design_scores_gemma":[0.002333013,0.0026031954,0.0064994637,0.000023431563,0.00004090921,0.000010588564,0.00011141591,0.009437963,0.96243596,0.010429419,0.0053158486,0.00075881864],"about_ca_topic_score_codex":0.000013378948,"about_ca_topic_score_gemma":0.0000097872135,"teacher_disagreement_score":0.099881776,"about_ca_system_score_codex":0.000036049452,"about_ca_system_score_gemma":0.000049683953,"threshold_uncertainty_score":0.8049168},"labels":[],"label_agreement":null},{"id":"W2964002622","doi":"10.1007/978-1-4939-9639-1_25","title":"New Advances in Amino Acid Profiling in Biological Samples by Capillary Electrophoresis-Mass Spectrometry","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Capillary Electrophoresis Applications","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Chemistry; Chromatography; Derivatization; Amino acid; Capillary electrophoresis–mass spectrometry; Mass spectrometry; Electrospray ionization; Capillary electrophoresis; Metabolomics; Sample preparation; Electrospray; Analytical Chemistry (journal); Biochemistry","score_opus":0.009838234212154878,"score_gpt":0.2979744608893196,"score_spread":0.28813622667716476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964002622","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30569878,0.2125612,0.48069394,0.00003798575,0.00007734506,0.00033696258,0.000006007445,0.000055725115,0.0005320696],"genre_scores_gemma":[0.1274441,0.1665957,0.70535785,0.00017819568,0.000046948473,0.00015321244,0.00012860577,0.000066626395,0.000028764218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99759,0.00054034643,0.0005172452,0.00056310766,0.0000743031,0.0007149627],"domain_scores_gemma":[0.9993001,0.00019187391,0.0000503635,0.0003709233,0.000013277071,0.000073450115],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006559813,0.00029491825,0.0005541662,0.0004338074,0.00001680695,0.000011562368,0.0003743848,0.0003704177,0.00012914001],"category_scores_gemma":[0.00010251713,0.00028183465,0.0000783963,0.0010214179,0.000056986602,0.000046322,0.00005340282,0.00053661986,0.00002033714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024022032,0.000023092221,0.016592404,0.000021879758,0.000012783658,0.0000106053485,0.00002187859,0.00006906635,0.9733967,0.003985519,0.0001755979,0.0056664567],"study_design_scores_gemma":[0.00048564383,0.00014314319,0.0011486359,0.000015173536,0.0000038339554,0.000008689769,0.00004258277,0.00019014186,0.97382593,0.0119033335,0.011903696,0.00032921648],"about_ca_topic_score_codex":0.00005352635,"about_ca_topic_score_gemma":0.000014833817,"teacher_disagreement_score":0.2246639,"about_ca_system_score_codex":0.00020679913,"about_ca_system_score_gemma":0.000049392955,"threshold_uncertainty_score":0.9999634},"labels":[],"label_agreement":null},{"id":"W2964531086","doi":"10.1007/978-1-4939-9597-4_15","title":"Enhanced Mass Spectrometry Detection of MHC Peptides","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Computational biology; Mass spectrometry; Major histocompatibility complex; Transcriptome; Genome; Identification (biology); Chemistry; Biology; Immune system; Chromatography; Gene; Genetics; Biochemistry; Gene expression","score_opus":0.01100765761503307,"score_gpt":0.31840590938860736,"score_spread":0.30739825177357427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964531086","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46968254,0.0004405621,0.5278215,0.000010312914,0.0001217577,0.00013399287,0.0000020278355,0.0000043957034,0.0017829073],"genre_scores_gemma":[0.6376074,0.00007997906,0.362069,0.000062898915,0.000020809513,0.000013672804,0.000023122408,0.000014202603,0.00010890677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875903,0.0002803126,0.0003743509,0.00027948144,0.00005197854,0.00025483084],"domain_scores_gemma":[0.99928916,0.000030062693,0.00015599206,0.00044614272,0.000050543178,0.000028130793],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006714954,0.00015897717,0.0002862432,0.00015334527,0.000015195308,0.000006486727,0.00022854845,0.00024520938,0.000025798943],"category_scores_gemma":[0.00017785255,0.0001470484,0.00012492653,0.00022408515,0.000050153354,0.000003457431,0.000111722395,0.00013216193,0.000008684837],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005659952,0.000025377925,0.0010732302,0.00003513812,0.000043796947,3.305133e-7,0.000025570043,0.00009064265,0.9902643,0.0003733618,0.0000017978097,0.00800984],"study_design_scores_gemma":[0.00050063536,0.00049742707,0.00097220973,0.000008885479,0.000008615585,0.0000065586246,0.00010911589,0.00025529967,0.99503434,0.0016288817,0.0008134999,0.0001645204],"about_ca_topic_score_codex":0.000013365435,"about_ca_topic_score_gemma":0.0000032229684,"teacher_disagreement_score":0.16792485,"about_ca_system_score_codex":0.00001532675,"about_ca_system_score_gemma":0.000027058195,"threshold_uncertainty_score":0.599646},"labels":[],"label_agreement":null},{"id":"W2964564551","doi":"10.1007/978-1-4939-9597-4_19","title":"Enhancing Mass Spectrometry-Based MHC-I Peptide Identification Through a Targeted Database Search Approach","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Izaak Walton Killam Health Centre; Dalhousie University","funders":"","keywords":"Identification (biology); Database; Mass spectrometry; Database search engine; Computational biology; Computer science; Chemistry; Information retrieval; Chromatography; Biology; Search engine","score_opus":0.02458779142006513,"score_gpt":0.34959942651219234,"score_spread":0.3250116350921272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964564551","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2010378,0.0009870684,0.7956418,0.000059662067,0.00015824859,0.00048245708,0.00002229146,0.000018326047,0.0015923881],"genre_scores_gemma":[0.15904297,0.00006469391,0.83905864,0.00031182697,0.000050040817,0.00006890058,0.001156378,0.00004146204,0.00020508847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971871,0.000804033,0.0006189962,0.00069107994,0.00013862738,0.0005602077],"domain_scores_gemma":[0.99854684,0.00005647528,0.00017710093,0.0010660905,0.000092507435,0.000060989005],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020401787,0.00029729673,0.0003831427,0.00021894123,0.00005977065,0.000044370387,0.0005255584,0.00032600336,0.000053139993],"category_scores_gemma":[0.0002990403,0.00028343682,0.00016486568,0.0004973265,0.00008064444,0.0000142507415,0.00022066999,0.00032267047,0.000033329325],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007047139,0.00008627067,0.0013740986,0.00010338989,0.00005866078,0.0000018049335,0.00007099071,0.00075211737,0.9957547,0.0012046066,0.000023721672,0.00049916503],"study_design_scores_gemma":[0.0009064145,0.00023332266,0.000420477,0.000015613228,0.000017994993,0.00001124611,0.00030113332,0.008587535,0.9871538,0.00057580124,0.0014269872,0.0003496691],"about_ca_topic_score_codex":0.000050517574,"about_ca_topic_score_gemma":0.0000036681784,"teacher_disagreement_score":0.043416876,"about_ca_system_score_codex":0.000047552378,"about_ca_system_score_gemma":0.00012226602,"threshold_uncertainty_score":0.9999618},"labels":[],"label_agreement":null},{"id":"W2964625852","doi":"10.1007/978-1-4939-9597-4_16","title":"Enrichment of Phosphorylated MHC Peptides with Immobilized Metal Affinity Chromatography and Titanium Dioxide Particles","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Phosphorylation; Major histocompatibility complex; Chemistry; MHC class I; Affinity chromatography; Peptide; Biochemistry; Phosphopeptide; Molecular biology; Biology; Enzyme","score_opus":0.010787536344787775,"score_gpt":0.33569165504922294,"score_spread":0.32490411870443514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964625852","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93022203,0.0015262291,0.06724658,0.000045396064,0.000037440583,0.0004518394,0.0000073581164,0.000009699775,0.00045340625],"genre_scores_gemma":[0.77758485,0.00011975678,0.22208655,0.00005901396,0.0000066515913,0.000045611763,0.000026559674,0.000016744438,0.000054271986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983153,0.00054791564,0.0002894961,0.0004432549,0.000105345796,0.0002987273],"domain_scores_gemma":[0.99927974,0.000059219743,0.00010321445,0.00039289554,0.00009057508,0.000074346266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008824986,0.00017666243,0.0003274641,0.00013648425,0.000024324074,0.000010067998,0.00016093599,0.00018402995,0.000051562256],"category_scores_gemma":[0.00015876297,0.00014170613,0.00008546154,0.00029208366,0.00023712729,0.0000037885206,0.00015342784,0.00013121047,0.0000036886602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028708042,0.00008763342,0.03463554,0.00003012604,0.00010125937,0.0000051118404,0.000028493923,0.00003395832,0.9617616,0.00081473775,0.0000034606578,0.0022110313],"study_design_scores_gemma":[0.0012486973,0.0008924528,0.0076548685,0.000013916247,0.00001555545,0.000014711098,0.00008241582,0.00009648063,0.9877708,0.00049505825,0.0015402983,0.00017476935],"about_ca_topic_score_codex":0.00008711438,"about_ca_topic_score_gemma":0.000028237017,"teacher_disagreement_score":0.15483998,"about_ca_system_score_codex":0.000010118053,"about_ca_system_score_gemma":0.00005402101,"threshold_uncertainty_score":0.57786083},"labels":[],"label_agreement":null},{"id":"W2964952561","doi":"10.1007/978-1-4939-9597-4_9","title":"Intact Mass Spectrometry Analysis of Immuno-Isolated Human Therapeutic Antibodies from Serum","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Antibody; In vivo; Computational biology; Monoclonal antibody; Chemistry; Drug; Biology; Immunology; Pharmacology; Biotechnology","score_opus":0.02951101795453329,"score_gpt":0.4378975125015976,"score_spread":0.40838649454706427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964952561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88561517,0.0027364206,0.10896285,0.00026443828,0.00010157995,0.00023382182,0.0000444726,0.000018460372,0.0020227686],"genre_scores_gemma":[0.7772644,0.00020309954,0.22157292,0.00028554114,0.00002221009,0.000005482895,0.00018278575,0.000019676902,0.0004438959],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99751216,0.001004227,0.00049089734,0.0004312397,0.0001670433,0.0003944025],"domain_scores_gemma":[0.9988002,0.00039064523,0.00012959038,0.0005284756,0.00008516851,0.00006591269],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00085211184,0.00020762085,0.0010282337,0.0010034449,0.000030042413,0.0000075771272,0.00025244558,0.00023283252,0.0015194014],"category_scores_gemma":[0.00008556295,0.00016170778,0.00037053996,0.0013662971,0.00018224705,0.000019554567,0.00012921014,0.00043106888,0.000022790327],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017340573,0.0000641551,0.34181768,0.000024294366,0.0019034435,0.000027517186,0.0000606974,0.000008360755,0.6518456,0.0013426992,0.0000010754387,0.002731088],"study_design_scores_gemma":[0.00090199854,0.00086836156,0.52756494,0.000043579133,0.00066496694,0.000006483113,0.00010522759,0.0021882062,0.45937815,0.007562961,0.00048475357,0.00023038429],"about_ca_topic_score_codex":0.00092352356,"about_ca_topic_score_gemma":0.00002240738,"teacher_disagreement_score":0.19246744,"about_ca_system_score_codex":0.000049255876,"about_ca_system_score_gemma":0.00004204873,"threshold_uncertainty_score":0.99939334},"labels":[],"label_agreement":null},{"id":"W2964957722","doi":"10.1007/978-1-4939-9597-4_25","title":"Immunoproteomic Biomarkers: From Publication to Personalized Medicine","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Context (archaeology); Biomarker; Personalized medicine; Immunotherapy; Medicine; Precision medicine; Disease; Immune system; Computer science; Data science; Computational biology; Immunology; Bioinformatics; Internal medicine; Biology; Pathology","score_opus":0.025247280066798078,"score_gpt":0.40406318647660316,"score_spread":0.3788159064098051,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964957722","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.519315,0.005081938,0.45275944,0.01574553,0.0007873687,0.0015984029,0.00001547271,0.000076760494,0.0046200915],"genre_scores_gemma":[0.025819732,0.00013578043,0.96224326,0.010369116,0.00010276295,0.00016112396,0.00023069093,0.00004220161,0.0008953239],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802744,0.00064626016,0.00041760286,0.00049703417,0.00011068776,0.000300946],"domain_scores_gemma":[0.99896365,0.00017606013,0.00010102748,0.0005852116,0.00008861583,0.00008544177],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0015742282,0.00018191738,0.00048209072,0.0003617971,0.000022233142,0.0000085008,0.00019798081,0.00021897508,0.002325019],"category_scores_gemma":[0.00050023996,0.00014558631,0.00011569492,0.0005840537,0.00015694542,0.000026708809,0.000060657796,0.0001754974,0.00008944111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014432693,0.00003607442,0.0053299004,0.000012727638,0.00017989938,0.0000061327078,0.00023857063,1.9392876e-7,0.92395955,0.0004946672,0.00021722873,0.06808177],"study_design_scores_gemma":[0.013033597,0.0018258118,0.037527822,0.00031907935,0.0001148595,0.00005343316,0.0004908085,0.00022528593,0.7440486,0.0046236054,0.1971901,0.0005470095],"about_ca_topic_score_codex":0.0010550987,"about_ca_topic_score_gemma":0.0000070756505,"teacher_disagreement_score":0.5094838,"about_ca_system_score_codex":0.00015695626,"about_ca_system_score_gemma":0.000077250195,"threshold_uncertainty_score":0.998587},"labels":[],"label_agreement":null},{"id":"W2964968264","doi":"10.1007/978-1-4939-9597-4_6","title":"Enriching for Low-Abundance Serum Proteins Using ProteoMiner™ and Protein-Level HPLC","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Immune system; Proteomics; Computational biology; Antibody; Biology; Mass spectrometry; Matrix (chemical analysis); Immunology; Chemistry; Biochemistry; Chromatography","score_opus":0.03085882773109436,"score_gpt":0.398689311470931,"score_spread":0.3678304837398366,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2964968264","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.324843,0.00010120572,0.67288876,0.00009213122,0.000014883785,0.0016297152,0.000028739207,0.00005011154,0.00035145303],"genre_scores_gemma":[0.022955284,0.0000066434955,0.97437793,0.00008883304,0.000037752292,0.001955177,0.000013151592,0.00004710847,0.00051812164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985774,0.0001118937,0.00033092577,0.0005631209,0.000046844092,0.00036979545],"domain_scores_gemma":[0.9991879,0.000085559535,0.00017876567,0.00044494055,0.000052350355,0.00005049969],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005933946,0.00021341644,0.00032524814,0.000077284,0.00008152097,0.000018986813,0.00023809317,0.00027262777,0.000030640076],"category_scores_gemma":[0.00021329516,0.0002109091,0.00006719599,0.00014291391,0.000087197805,0.00004533928,0.00016690863,0.00029874008,0.0000012168418],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027744361,0.00003073396,0.0006774561,0.00019395183,0.000010538271,0.0000012034731,0.000025253212,0.000048198708,0.9759892,0.013542892,4.2114362e-7,0.009452357],"study_design_scores_gemma":[0.0004576359,0.000048509555,0.000018059987,0.00009143673,0.000006593655,0.000010394612,0.000013565452,0.0061031664,0.93087995,0.060118783,0.001996774,0.00025514467],"about_ca_topic_score_codex":0.00003352134,"about_ca_topic_score_gemma":0.0000023314792,"teacher_disagreement_score":0.30188772,"about_ca_system_score_codex":0.000066682966,"about_ca_system_score_gemma":0.000048576843,"threshold_uncertainty_score":0.86006236},"labels":[],"label_agreement":null},{"id":"W2965200254","doi":"10.1007/978-1-4939-9658-2_2","title":"Morphology of Microglia Across Contexts of Health and Disease","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":233,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Microglia; Biology; Phenotype; Ultrastructure; Neuroscience; Disease; Pathology; Morphology (biology); Electron microscope; Medicine; Inflammation; Immunology; Zoology; Gene","score_opus":0.12724268436591024,"score_gpt":0.4932011583418322,"score_spread":0.36595847397592196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965200254","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046914988,0.87235475,0.12560104,0.000075426535,0.0004543474,0.00085821544,0.00015363164,0.000014873216,0.00001857681],"genre_scores_gemma":[0.000028575521,0.9481283,0.0507348,0.00091079285,0.000009157305,0.00003972729,0.000024657451,0.00003813371,0.00008584792],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9903208,0.007448038,0.00113779,0.00070641737,0.000082803344,0.00030412496],"domain_scores_gemma":[0.99761033,0.0007264649,0.0009665393,0.00053349306,0.000031584284,0.0001315618],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001219818,0.00028557595,0.0018053772,0.0002522886,0.000030883337,0.0000067445453,0.00033406136,0.00022728802,0.000016687276],"category_scores_gemma":[0.0024272732,0.00024907128,0.00022262041,0.00030725077,0.00029522847,0.000019204192,0.0002312703,0.00028039847,0.0000056385793],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012577652,0.000035729194,0.0000045447623,0.0038074253,0.000005893036,0.000019247937,0.00004217568,0.0000013766758,0.47516757,0.01294668,0.000006803774,0.50794995],"study_design_scores_gemma":[0.0010333562,0.0006894662,0.0000042084357,0.0018436544,0.00010488376,0.00015871116,0.00001278588,0.00005600384,0.53758353,0.0058705783,0.45200637,0.0006364747],"about_ca_topic_score_codex":0.0000040678433,"about_ca_topic_score_gemma":5.1764334e-7,"teacher_disagreement_score":0.5073135,"about_ca_system_score_codex":0.000018667703,"about_ca_system_score_gemma":0.00032256063,"threshold_uncertainty_score":0.9999961},"labels":[],"label_agreement":null},{"id":"W2965247763","doi":"10.1007/978-1-4939-9585-1_10","title":"Mapping Retinoic Acid-Dependant 5mC Derivatives in Mouse Embryonic Fibroblasts","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Lawson Health Research Institute; Western University","funders":"","keywords":"Retinoic acid; Bisulfite; Bisulfite sequencing; Chemistry; Derivatization; Retinoic acid receptor; Cancer research; Molecular biology; DNA methylation; Computational biology; Biochemistry; Biology; High-performance liquid chromatography; Gene; Chromatography","score_opus":0.015449375885321071,"score_gpt":0.34451257216040915,"score_spread":0.32906319627508807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965247763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6835976,0.0023770868,0.3128668,0.00007355282,0.00014867765,0.0002793354,0.0000053729614,0.000010143906,0.0006413996],"genre_scores_gemma":[0.634055,0.00032669303,0.3648175,0.00018813596,0.000044960983,0.000044115615,0.00009137777,0.000043549247,0.00038867252],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99691963,0.0013363742,0.00044141934,0.00072740053,0.000083929415,0.0004912435],"domain_scores_gemma":[0.9990879,0.00007465986,0.00014790706,0.0005716236,0.00005286287,0.000065007596],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013543714,0.00026252193,0.0003664078,0.00027302452,0.000027565926,0.000016090691,0.00031479273,0.00042644708,0.00003879505],"category_scores_gemma":[0.00047843927,0.00026531657,0.00011547961,0.00031664508,0.00009473323,0.0000042937622,0.00027070148,0.00026230613,0.000017496628],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004314537,0.00004109202,0.024997944,0.000026572794,0.000021768219,0.0000068860923,0.000107475455,0.0003958689,0.96885574,0.00031255858,0.0000031242553,0.00518781],"study_design_scores_gemma":[0.000764895,0.00028366482,0.0052782977,0.000027400429,0.0000026694897,0.0000036748538,0.00010835353,0.00032394726,0.98735017,0.0017846976,0.0037563434,0.00031587292],"about_ca_topic_score_codex":0.000031817075,"about_ca_topic_score_gemma":0.000042984648,"teacher_disagreement_score":0.05195068,"about_ca_system_score_codex":0.000041820844,"about_ca_system_score_gemma":0.0000767691,"threshold_uncertainty_score":0.9999799},"labels":[],"label_agreement":null},{"id":"W2965597847","doi":"10.1007/978-1-4939-9597-4_10","title":"Antigen Identification for Cell-Binding Antibodies Using Ligand-Directed Crosslinking and Biotin Transfer","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Research Council Canada","keywords":"Panning (audio); Biotin; Ligand (biochemistry); Trypsin; Chemistry; Antibody; Biochemistry; Cell; Receptor; Antigen; Molecular biology; Computational biology; Combinatorial chemistry; Biology; Enzyme; Immunology","score_opus":0.04970169963228618,"score_gpt":0.44811692257158287,"score_spread":0.3984152229392967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965597847","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7593991,0.0013073299,0.2382454,0.00016795575,0.00014882021,0.00052915595,0.000013470369,0.00002379924,0.00016493662],"genre_scores_gemma":[0.48029852,0.00036528942,0.51859367,0.00014198928,0.000053555545,0.0000148722975,0.00006929411,0.000028603032,0.00043417278],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846566,0.00031893014,0.00034002797,0.0004188694,0.00008818361,0.00036833333],"domain_scores_gemma":[0.9993351,0.00029409787,0.000044895034,0.00017526936,0.00008746992,0.00006317668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012396874,0.00015685997,0.0003978307,0.00027604256,0.00008765318,0.000026959788,0.000091906266,0.00019599278,0.000020534535],"category_scores_gemma":[0.00015515655,0.00013426179,0.000100372265,0.00023155518,0.00013907642,0.000030670788,0.00005617204,0.0001986965,0.000004928779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016631927,0.000037902937,0.08717805,0.00018469423,0.000038379872,0.000009508841,0.00017507141,0.0000052975415,0.9056717,0.00045508417,0.00000247257,0.0060755135],"study_design_scores_gemma":[0.0010059024,0.00018414382,0.014037608,0.00008529059,0.00002534833,0.00003307088,0.00006824545,0.0061701005,0.9759824,0.00092831894,0.0013129836,0.0001665318],"about_ca_topic_score_codex":0.00008417784,"about_ca_topic_score_gemma":0.000004395828,"teacher_disagreement_score":0.2803483,"about_ca_system_score_codex":0.000028312563,"about_ca_system_score_gemma":0.000049719132,"threshold_uncertainty_score":0.5475037},"labels":[],"label_agreement":null},{"id":"W2965725196","doi":"10.1007/978-1-4939-9597-4_3","title":"Classical Immunoproteomics: Serological Proteome Analysis (SERPA) for Antigen Identification","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Proteome; Serology; Antigen; Immunology; Immune system; Identification (biology); Biology; Repertoire; Virology; Antibody; Computational biology; Bioinformatics","score_opus":0.02119498134632127,"score_gpt":0.3988670277215593,"score_spread":0.37767204637523805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965725196","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4643828,0.00021202443,0.53417355,0.00014154357,0.00013600005,0.0007549884,0.00002077089,0.000007629584,0.00017071328],"genre_scores_gemma":[0.52067405,0.00012254731,0.4770491,0.00024511063,0.00012206672,0.00047752136,0.0005132473,0.000035661997,0.0007606661],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973416,0.000838784,0.00045392802,0.0007840325,0.00008997628,0.000491683],"domain_scores_gemma":[0.99891305,0.00007268135,0.00012783003,0.0006692916,0.000143484,0.00007366316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002226724,0.00020515338,0.0004476661,0.00021938547,0.000050828738,0.000033745513,0.00043436236,0.0005443053,0.00009572072],"category_scores_gemma":[0.0005472177,0.00018283777,0.00032146124,0.00046005126,0.0001448173,0.0000037495206,0.00019608552,0.00019381913,0.000029798586],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033961746,0.00006415038,0.008858162,0.000016720964,0.00023701653,0.0000014172042,0.000009188518,0.00008075023,0.9837135,0.0010285194,0.000013132532,0.005637808],"study_design_scores_gemma":[0.000967537,0.00065183226,0.013833431,0.0000037214918,0.00005675688,0.000003800948,0.00001406663,0.0018045391,0.9627317,0.0037269806,0.015895484,0.0003101026],"about_ca_topic_score_codex":0.000018872082,"about_ca_topic_score_gemma":0.000010404933,"teacher_disagreement_score":0.05712443,"about_ca_system_score_codex":0.000029185829,"about_ca_system_score_gemma":0.00006596033,"threshold_uncertainty_score":0.7455908},"labels":[],"label_agreement":null},{"id":"W2965763383","doi":"10.1007/978-1-4939-9597-4_2","title":"Immunoproteomics Methods and Techniques","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Immune system; Computational biology; Antigen; Proteomics; In silico; Biology; Genomics; Immunology; Genome; Genetics; Gene","score_opus":0.01357187120390529,"score_gpt":0.3729669388558324,"score_spread":0.3593950676519271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965763383","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24470441,0.0026520363,0.7495552,0.00008046522,0.00012930264,0.00039357413,0.000002901352,0.000017107925,0.002465035],"genre_scores_gemma":[0.012575111,0.00044116334,0.9862211,0.0004126644,0.000026998121,0.00006202629,0.000042936063,0.000029046701,0.00018898983],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827933,0.00064571545,0.0003611442,0.0003749235,0.000035030236,0.00030383535],"domain_scores_gemma":[0.9992265,0.00004218676,0.0001073005,0.00054395257,0.000039645056,0.000040392526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018019396,0.00020937088,0.00031068083,0.00011710928,0.000029084646,0.000021267071,0.00026098732,0.00034328445,0.000018088078],"category_scores_gemma":[0.00021152597,0.00018817603,0.00008314766,0.00013191334,0.000078616955,0.0000044690464,0.00037078751,0.00019462591,0.0000042495653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031475756,0.000017247941,0.0016335162,0.000022702294,0.0000318478,5.7348205e-7,0.000038621474,0.000004096676,0.90906334,0.001867262,0.000009598409,0.08727972],"study_design_scores_gemma":[0.00037410678,0.00033191187,0.00036888482,0.000010458565,0.0000086452865,0.00003669355,0.00007295902,0.00032188202,0.95921403,0.0037719759,0.03523453,0.00025394262],"about_ca_topic_score_codex":0.000021376778,"about_ca_topic_score_gemma":9.967594e-7,"teacher_disagreement_score":0.23666589,"about_ca_system_score_codex":0.000012731816,"about_ca_system_score_gemma":0.00003293809,"threshold_uncertainty_score":0.76735955},"labels":[],"label_agreement":null},{"id":"W2965768470","doi":"10.1007/978-1-4939-9658-2_8","title":"Visualizing Dark Microglia","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":53,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Microglia; Ultrastructure; Electron microscope; Pathology; Biology; Dark field microscopy; Transmission electron microscopy; Microscopy; Cell biology; Chemistry; Neuroscience; Medicine; Nanotechnology; Materials science; Physics; Inflammation; Immunology; Optics","score_opus":0.04178633699662237,"score_gpt":0.413241261424355,"score_spread":0.37145492442773265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965768470","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38688612,0.000028367303,0.60750526,0.0002477637,0.0008162778,0.00027074505,0.0000024194737,0.000081069404,0.004161966],"genre_scores_gemma":[0.17198014,0.000037867158,0.8158889,0.010746231,0.00004399937,0.000039120703,0.0000056669805,0.00005365821,0.0012044512],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968578,0.0019753783,0.0002846993,0.0005324468,0.00007991333,0.00026973346],"domain_scores_gemma":[0.99923956,0.00027426935,0.00008474899,0.0003388185,0.000015772299,0.000046827554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006259339,0.00013683889,0.00019428093,0.00019617807,0.000039020175,0.000025543544,0.00025258772,0.00010012628,0.00020057055],"category_scores_gemma":[0.0006767024,0.00013324809,0.00006177114,0.00031959428,0.00004577811,0.00004636312,0.000102780425,0.00019097264,0.00022566081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008529032,0.000015368796,0.00012902578,0.0000046377186,7.2632395e-7,0.000020428097,0.000029799688,0.00003959892,0.91624147,0.080454186,0.000012241477,0.0030440022],"study_design_scores_gemma":[0.00031181387,0.00007463687,0.00002262969,0.000003804039,0.0000016285254,0.000024802994,0.0000063640487,0.0010727961,0.98111904,0.010850142,0.0063758725,0.00013645405],"about_ca_topic_score_codex":0.000002081673,"about_ca_topic_score_gemma":6.923438e-7,"teacher_disagreement_score":0.21490599,"about_ca_system_score_codex":0.000017146132,"about_ca_system_score_gemma":0.000022659819,"threshold_uncertainty_score":0.54336995},"labels":[],"label_agreement":null},{"id":"W2965947117","doi":"10.1007/978-1-4939-9694-0_16","title":"Enumeration of Viable Chlamydia from Infected Animals Using Immunofluorescent Microscopy","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Chlamydia trachomatis; Enumeration; Chlamydia; Biology; Microbiology; Intracellular parasite; Obligate; Chlamydiaceae; Antigen; Chlamydiales; Bacteria; Virology; Immunology; Genetics","score_opus":0.0240546562524691,"score_gpt":0.4195252892935113,"score_spread":0.3954706330410422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2965947117","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8019653,0.003211652,0.1933092,0.000020052048,0.0006551496,0.00046156166,0.00002198438,0.000023058994,0.00033207418],"genre_scores_gemma":[0.6996248,0.00007192357,0.2999814,0.00003319078,0.00001837637,0.000029365614,0.00011950164,0.000028187422,0.00009330633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99574566,0.002816153,0.000488065,0.00053012546,0.00002980397,0.00039016842],"domain_scores_gemma":[0.998604,0.0004122895,0.00017969556,0.00061405555,0.00017591269,0.000014018725],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0012607102,0.00018606626,0.00048811288,0.0003677204,0.000049969927,0.000009315721,0.00023527391,0.00043856894,0.0010341986],"category_scores_gemma":[0.0006872455,0.00017915509,0.00010461473,0.00044796328,0.00024744225,0.000051108702,0.00015486129,0.00047917964,0.00015068939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013141453,0.0001341466,0.081223816,0.0000125443285,0.00014809285,0.0000015639608,0.00008825604,0.00011103386,0.91440284,0.0007784264,0.0000044811413,0.002963364],"study_design_scores_gemma":[0.0008191091,0.00021619519,0.022264557,0.000025035004,0.000019189043,0.000012861413,0.000028647633,0.00007038608,0.9734645,0.0015158427,0.0014070205,0.0001566429],"about_ca_topic_score_codex":0.0018873672,"about_ca_topic_score_gemma":0.000009119992,"teacher_disagreement_score":0.1066722,"about_ca_system_score_codex":0.0001114628,"about_ca_system_score_gemma":0.00011604147,"threshold_uncertainty_score":0.999879},"labels":[],"label_agreement":null},{"id":"W2966019474","doi":"10.1007/978-1-4939-9658-2_7","title":"Ultrastructural Analyses of Microglial Interactions with Synapses","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Institute of Environmental Health Sciences; National Institute of Neurological Disorders and Stroke; National Eye Institute; National Institute on Alcohol Abuse and Alcoholism","keywords":"Neuropil; Ultrastructure; Neuroscience; Microglia; Biology; Electron microscope; Synapse; Pathology; Chemistry; Cell biology; Anatomy; Central nervous system; Medicine; Physics","score_opus":0.05412635424423943,"score_gpt":0.43113429116028584,"score_spread":0.3770079369160464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966019474","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67810977,0.0000070291426,0.32093614,0.00007722716,0.00025445037,0.00013503313,0.000005987186,0.000020457379,0.00045389132],"genre_scores_gemma":[0.6847234,0.000005883662,0.31463388,0.00045696215,0.000010744008,0.000008534749,0.0000030077194,0.000011339034,0.00014630835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812895,0.0010608147,0.00025958737,0.00033151673,0.00006787365,0.00015124114],"domain_scores_gemma":[0.9992545,0.00032191965,0.00013190444,0.00023367556,0.00003006653,0.000027931212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00016260665,0.00011278979,0.00021078707,0.00021419079,0.000023309603,0.0000104844385,0.0001654156,0.000044544,0.00020110446],"category_scores_gemma":[0.00036202074,0.00008770596,0.00005338933,0.0003008959,0.000087940985,0.000052086856,0.000036499194,0.00014538242,0.00001235749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038561553,0.000015792497,0.0002892773,0.0000057131206,0.000003889855,0.000010517417,0.000028941626,0.0004011097,0.98927563,0.008820011,0.0000013002374,0.001109255],"study_design_scores_gemma":[0.0002971998,0.0001606767,0.000102991544,0.0000051537395,0.000006751896,0.000076466386,0.000015363868,0.0006276794,0.9972574,0.0011736149,0.00018786178,0.00008881681],"about_ca_topic_score_codex":0.000007863804,"about_ca_topic_score_gemma":0.000004079728,"teacher_disagreement_score":0.007981792,"about_ca_system_score_codex":0.0000099908375,"about_ca_system_score_gemma":0.000024350145,"threshold_uncertainty_score":0.35765454},"labels":[],"label_agreement":null},{"id":"W2966522261","doi":"10.1007/978-1-4939-9585-1_9","title":"Promoting Primary Myoblast Differentiation Through Retinoid X Receptor Signaling","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Myogenesis; Myocyte; Cell biology; Transcription factor; Agonist; Nuclear receptor; Retinoid X receptor; Cellular differentiation; Biology; Retinoid X receptor alpha; Receptor; Chemistry; Genetics; Gene","score_opus":0.011558620532497978,"score_gpt":0.3293085504697652,"score_spread":0.31774992993726725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966522261","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7422746,0.00053075684,0.25500485,0.00011243098,0.00029842,0.00030701706,0.000004731812,0.000018691822,0.001448498],"genre_scores_gemma":[0.65617764,0.00008796213,0.34174725,0.0012037467,0.0001046997,0.00006398567,0.00046122255,0.00004257652,0.00011088569],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973366,0.0011885014,0.00035081085,0.0006600237,0.00006256353,0.0004014807],"domain_scores_gemma":[0.9992627,0.00006665119,0.00015372338,0.0004261798,0.000050148396,0.000040605657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007068344,0.00022781892,0.00031003685,0.00006660536,0.000049973012,0.000010031468,0.00025532005,0.0004132665,0.00009619827],"category_scores_gemma":[0.00026067963,0.00022214884,0.00012984863,0.00015494146,0.00010649237,0.0000053981144,0.00020421135,0.0002329758,0.000026913562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013050312,0.000067206616,0.006959749,0.000045780198,0.000040066305,8.8273185e-7,0.00012999891,0.00006373557,0.98642564,0.0007040561,0.000026702814,0.0054057],"study_design_scores_gemma":[0.00079056056,0.00044751403,0.0021017196,0.000026055764,0.00001133086,0.0000034268544,0.000060347968,0.00012514571,0.98709583,0.0049144784,0.0041068615,0.00031672817],"about_ca_topic_score_codex":0.000011308294,"about_ca_topic_score_gemma":0.000002626649,"teacher_disagreement_score":0.08674239,"about_ca_system_score_codex":0.000022155295,"about_ca_system_score_gemma":0.000051025945,"threshold_uncertainty_score":0.90589666},"labels":[],"label_agreement":null},{"id":"W2966620263","doi":"10.1007/978-1-4939-9597-4_18","title":"Genome-Based Bioinformatic Prediction of Major Histocompatibility (MHC)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Major histocompatibility complex; Genome; Computational biology; Biology; Gene; Genetics","score_opus":0.017176705761500984,"score_gpt":0.3132963751158307,"score_spread":0.2961196693543297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2966620263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5122845,0.00040661255,0.48538968,0.000027948765,0.00012898882,0.00047077698,0.000024330435,0.00000863075,0.0012585454],"genre_scores_gemma":[0.5075145,0.000016120175,0.49181652,0.00016814208,0.000017671146,0.000051436302,0.00033860243,0.000018978104,0.00005805705],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983976,0.0003364554,0.000655927,0.00027204904,0.00007167672,0.0002662849],"domain_scores_gemma":[0.99892396,0.000035015913,0.00023701137,0.0006894707,0.00007318483,0.00004133417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011274028,0.0001885221,0.0003475942,0.00015690988,0.000021220954,0.000007030063,0.0002983492,0.00025391896,0.000052307976],"category_scores_gemma":[0.00016173601,0.0001698905,0.00014939487,0.00019071449,0.000083547806,0.0000054960246,0.00013346405,0.00013189402,0.000009213931],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007192375,0.00007077056,0.014618496,0.00013764424,0.0000370848,2.3767186e-7,0.000047417212,0.00054319337,0.98183006,0.0002906458,0.000006607186,0.0023459056],"study_design_scores_gemma":[0.0023603437,0.0011432951,0.02295491,0.000029401584,0.0000317672,0.000009755887,0.00013113752,0.012628674,0.9529051,0.001058173,0.0064035417,0.00034387183],"about_ca_topic_score_codex":0.000022715409,"about_ca_topic_score_gemma":0.000002816821,"teacher_disagreement_score":0.028924944,"about_ca_system_score_codex":0.00003243752,"about_ca_system_score_gemma":0.000085265514,"threshold_uncertainty_score":0.6927933},"labels":[],"label_agreement":null},{"id":"W2967935197","doi":"10.1007/978-1-4939-9674-2_1","title":"Imaging Single mRNA Molecules in Mammalian Cells Using an Optimized MS2-MCP System","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"National Institute of Neurological Disorders and Stroke; National Institute of General Medical Sciences; National Institutes of Health; National Cancer Institute; National Institute on Aging; Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung","keywords":"Cell biology; Messenger RNA; Yeast; Live cell imaging; Computational biology; Green fluorescent protein; Gene expression; Biology; Chemistry; Cell; Nanotechnology; Gene; Materials science; Biochemistry","score_opus":0.024976575913116965,"score_gpt":0.3702764162831258,"score_spread":0.3452998403700088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2967935197","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6397471,0.00072729896,0.35827938,0.00003401591,0.00019907656,0.00034611727,0.000006150338,0.000016080105,0.0006447842],"genre_scores_gemma":[0.40251383,0.000019613442,0.5969596,0.00019602502,0.00005257184,0.000025421787,0.000051890176,0.000055637694,0.00012543338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99549973,0.0021730664,0.0005128352,0.0008712537,0.00012745788,0.0008156306],"domain_scores_gemma":[0.9988387,0.00005213437,0.00013172145,0.00075070065,0.00007298527,0.00015375906],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018619812,0.00031044762,0.0004882116,0.0003485209,0.000046014913,0.000045833778,0.0005042421,0.00031455798,0.000027854174],"category_scores_gemma":[0.0001587185,0.00031240177,0.00014187713,0.00032105067,0.00012119323,0.000010546119,0.00029468033,0.0003008617,0.00001035603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012815322,0.00009350716,0.0053256745,0.000048640817,0.00002085538,0.000096326905,0.00002775195,0.0045945635,0.98512334,0.00022439113,0.000003971446,0.0043128557],"study_design_scores_gemma":[0.0014548983,0.00027005473,0.00024898592,0.000048550624,0.000009467784,0.000055355416,0.00032962047,0.033389937,0.9630182,0.00012865996,0.0006582297,0.00038803942],"about_ca_topic_score_codex":0.00047744572,"about_ca_topic_score_gemma":0.000042504358,"teacher_disagreement_score":0.23868018,"about_ca_system_score_codex":0.0001216269,"about_ca_system_score_gemma":0.000102827966,"threshold_uncertainty_score":0.9999328},"labels":[],"label_agreement":null},{"id":"W2968297149","doi":"10.1007/978-1-4939-9674-2_9","title":"Live-Cell Imaging of mRNP–NPC Interactions in Budding Yeast","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute; University of Alberta","funders":"National Institute of Biomedical Imaging and Bioengineering; National Institute of General Medical Sciences; National Institute on Drug Abuse; Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Budding yeast; Nuclear pore; Yeast; Cell biology; Live cell imaging; Nuclear imaging; Cell; Biology; Biophysics; Computational biology; Saccharomyces cerevisiae; Chemistry; Nanotechnology; Genetics; Materials science; Cytoplasm","score_opus":0.017199133833882753,"score_gpt":0.40270144146853054,"score_spread":0.38550230763464777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968297149","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8386757,0.0007163492,0.1575915,0.000062365885,0.00014715349,0.00017746484,0.000004871529,0.0000043544965,0.0026202525],"genre_scores_gemma":[0.81498855,0.000065199936,0.18421184,0.00012064386,0.000025508569,0.000019420437,0.000028097707,0.00001968654,0.0005210409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982194,0.0006758165,0.00031010484,0.0003848667,0.000057521815,0.00035230824],"domain_scores_gemma":[0.99939406,0.000064661166,0.0000843896,0.00035763963,0.000048968308,0.00005027788],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000902795,0.00013293093,0.00024367942,0.00023832393,0.000015123275,0.000007629516,0.0002517772,0.000093142444,0.0000648521],"category_scores_gemma":[0.00027562576,0.00013308601,0.00009267015,0.00020029095,0.00007678873,0.0000040691143,0.00021455821,0.00023525752,0.000013918059],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043213877,0.00005284521,0.08795179,0.00002091396,0.000010501646,0.000009050631,0.000040445895,0.00012654017,0.9064791,0.00018507094,0.000011723868,0.0050687636],"study_design_scores_gemma":[0.0007153772,0.00013306286,0.0034246866,0.000038613132,0.000003902131,0.0000144031865,0.00026325404,0.0016481072,0.9911482,0.00038309811,0.0020543053,0.00017303435],"about_ca_topic_score_codex":0.00023543058,"about_ca_topic_score_gemma":0.000054540382,"teacher_disagreement_score":0.08466901,"about_ca_system_score_codex":0.000026507885,"about_ca_system_score_gemma":0.000056790686,"threshold_uncertainty_score":0.542709},"labels":[],"label_agreement":null},{"id":"W2968534099","doi":"10.1007/978-1-4939-9674-2_16","title":"Visualizing Transcription Factor Binding on Mitotic Chromosomes Using Single-Molecule Live-Cell Imaging","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mitosis; Cell biology; Biology; Embryonic stem cell; Transcription factor; Live cell imaging; Cell division; Cell; Genetics; Gene","score_opus":0.02320409415888272,"score_gpt":0.40283597541391886,"score_spread":0.3796318812550361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2968534099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5657212,0.0010721569,0.43226096,0.0000169484,0.0003966606,0.00020232808,0.000006386899,0.00001842734,0.00030491597],"genre_scores_gemma":[0.7957822,0.000042475407,0.20367588,0.00020388684,0.00008532983,0.000012602955,0.00005225196,0.00006600845,0.00007933561],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99775636,0.00050927786,0.0003707977,0.0007157047,0.00010158384,0.0005462683],"domain_scores_gemma":[0.99928224,0.000054317523,0.000096428565,0.00044264807,0.000040206825,0.0000841859],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00041386922,0.0003314755,0.00033958344,0.00025676013,0.00004921695,0.000031395095,0.00025157665,0.00025500703,0.00005287668],"category_scores_gemma":[0.000106115454,0.0003504084,0.00018224178,0.00020879906,0.00006164911,0.000005517672,0.00009924909,0.00022827029,0.000020087047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003108951,0.000078704325,0.0033096548,0.00004772893,0.000026385871,0.000012682273,0.00010347657,0.001677615,0.99183273,0.00005820719,0.0000030028732,0.0028187404],"study_design_scores_gemma":[0.000722431,0.00034405245,0.00020836735,0.000054945704,0.000019246512,0.000023466833,0.00012307409,0.0034345577,0.99361265,0.00006209513,0.0009850579,0.00041003822],"about_ca_topic_score_codex":0.000020587475,"about_ca_topic_score_gemma":0.0000031583695,"teacher_disagreement_score":0.23006101,"about_ca_system_score_codex":0.000067331806,"about_ca_system_score_gemma":0.000038216112,"threshold_uncertainty_score":0.9998948},"labels":[],"label_agreement":null},{"id":"W296922660","doi":"10.1007/978-1-4939-0805-9_1","title":"Detecting Protein–Protein Interactions/Complex Components Using Mass Spectrometry Coupled Techniques","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Immunoprecipitation; Mass spectrometry; Chromatography; Chemistry; Proteomics; Protein detection; Computational biology; Computer science; Nanotechnology; Biochemistry; Materials science; Biology","score_opus":0.04271080438269017,"score_gpt":0.41429189045545334,"score_spread":0.3715810860727632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W296922660","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19074737,0.00002711943,0.8069265,0.000066882865,0.000017758019,0.00039967496,0.000004541387,0.00024010446,0.0015700805],"genre_scores_gemma":[0.2047523,0.0000023286996,0.79461145,0.00006189913,0.000056157423,0.00040806364,0.000020045565,0.000042196843,0.00004557294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981563,0.0003536839,0.00048201357,0.0005353275,0.000075238335,0.00039742762],"domain_scores_gemma":[0.99889076,0.00013007219,0.0002717519,0.0005853429,0.000060564726,0.000061522325],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000825966,0.00025088683,0.00037522794,0.00022183164,0.00012858705,0.000023845309,0.00037082363,0.00023772329,0.00015600267],"category_scores_gemma":[0.0003789329,0.000266959,0.00010790966,0.00032841892,0.00012224408,0.000042915777,0.00017534863,0.0005842814,0.0000032803623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016684808,0.00003921462,0.0002089885,0.000032967317,0.000014517698,0.000002497204,0.000006969541,0.000016470625,0.98312914,0.0046259253,2.961029e-7,0.011906301],"study_design_scores_gemma":[0.0001617956,0.000030990308,0.00000930494,0.00006781004,0.000008165855,0.000016953594,0.000011738594,0.013440419,0.8954561,0.088479415,0.0020637403,0.00025358534],"about_ca_topic_score_codex":0.000113353446,"about_ca_topic_score_gemma":0.0000029644152,"teacher_disagreement_score":0.08767309,"about_ca_system_score_codex":0.00019073744,"about_ca_system_score_gemma":0.000017026594,"threshold_uncertainty_score":0.99997824},"labels":[],"label_agreement":null},{"id":"W2969304028","doi":"10.1007/978-1-4939-9666-7_22","title":"Heme•G-Quadruplex DNAzymes: Conditions for Maximizing Their Peroxidase Activity","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Deoxyribozyme; Peroxidase; G-quadruplex; Chemistry; Biochemical engineering; Bioanalysis; DNA; Computational biology; Enzyme; Combinatorial chemistry; Biochemistry; Computer science; Biology; Engineering; Chromatography","score_opus":0.02323805701074453,"score_gpt":0.40463491202963314,"score_spread":0.3813968550188886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2969304028","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41317534,0.00023086315,0.585512,0.00018391685,0.00009954911,0.00040046423,0.00005301422,0.000035709352,0.00030918213],"genre_scores_gemma":[0.55880874,0.000056689107,0.44032785,0.00030435174,0.000046140165,0.00006657735,0.00019255085,0.000026225918,0.00017087552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800116,0.00055917946,0.0002781483,0.00068921526,0.00004989707,0.00042243025],"domain_scores_gemma":[0.9990006,0.000095673626,0.0001395378,0.0006055299,0.00009575945,0.00006288944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008355145,0.00026934466,0.00039134035,0.00014876894,0.00006974242,0.000015682188,0.0002481889,0.00037456042,0.000009669107],"category_scores_gemma":[0.00026448793,0.00023335226,0.00027758107,0.00019625667,0.00015451181,0.0000044921608,0.00014663312,0.00016844564,0.0000029422074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008204787,0.0000695331,0.00042065728,0.000017319784,0.000068089474,0.0000018830794,0.000012195943,0.000019859963,0.9855806,0.0007918624,0.00004566661,0.012890243],"study_design_scores_gemma":[0.0005209574,0.00034421196,0.00012502029,0.0000145400445,0.000021584345,0.00001619322,0.00006813527,0.00046194057,0.9827018,0.003483191,0.011932349,0.00031012023],"about_ca_topic_score_codex":0.000013225781,"about_ca_topic_score_gemma":0.000009372124,"teacher_disagreement_score":0.14563338,"about_ca_system_score_codex":0.00003191411,"about_ca_system_score_gemma":0.00004922669,"threshold_uncertainty_score":0.95158285},"labels":[],"label_agreement":null},{"id":"W2970146138","doi":"10.1007/978-1-4939-9690-2_13","title":"NMR-Based Urinary Metabolomics Applications","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Winnipeg","funders":"","keywords":"Metabolomics; Standardization; Data science; Computer science; Field (mathematics); Biochemical engineering; Engineering; Bioinformatics; Biology; Mathematics","score_opus":0.013458220036840473,"score_gpt":0.35722530686262,"score_spread":0.3437670868257795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970146138","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10925618,0.0052003986,0.8800181,0.00021954789,0.00022872732,0.0005822421,0.000020370457,0.000020374971,0.0044540693],"genre_scores_gemma":[0.10636904,0.00038906457,0.89103514,0.0011538443,0.000095189076,0.00029583968,0.00015176699,0.000044271903,0.00046583245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798125,0.0005429021,0.00033588667,0.0006671664,0.00006435275,0.0004084685],"domain_scores_gemma":[0.9989608,0.00006465204,0.00011417464,0.0007324834,0.00006328571,0.000064592365],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088357984,0.0002421787,0.0003986567,0.00019920741,0.00004476691,0.0000111625,0.00036880327,0.00027495148,0.00006813588],"category_scores_gemma":[0.00014708524,0.0002327034,0.00016950068,0.000323325,0.000121120116,0.0000018979757,0.00023459432,0.0001868194,0.000031854845],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045955814,0.00011154788,0.007728489,0.000016124292,0.000067742556,0.0000025659044,0.000004698172,0.00014904917,0.97408664,0.013105835,0.000037016383,0.0046443213],"study_design_scores_gemma":[0.0010947264,0.0004721862,0.0016230502,0.0000046395085,0.000035969486,0.00001351029,0.000035827394,0.00030835907,0.671879,0.0067258268,0.31736138,0.00044551064],"about_ca_topic_score_codex":0.000010013145,"about_ca_topic_score_gemma":0.0000038521803,"teacher_disagreement_score":0.31732437,"about_ca_system_score_codex":0.000020193997,"about_ca_system_score_gemma":0.00007331898,"threshold_uncertainty_score":0.94893694},"labels":[],"label_agreement":null},{"id":"W2970149384","doi":"10.1007/978-1-4939-9728-2_3","title":"Gene Modification and Immunological Analyses for the Development of Immunotherapy Utilizing T Cells Redirected with Antigen-Specific Receptors","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Chimeric antigen receptor; Immunotherapy; T-cell receptor; Antigen; T cell; Transduction (biophysics); Adoptive cell transfer; Cancer immunotherapy; Receptor; Antigen-presenting cell; Immunology; Cytotoxic T cell; Biology; Cancer research; Immune system; In vitro","score_opus":0.1313057769871186,"score_gpt":0.462946372630096,"score_spread":0.33164059564297743,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970149384","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56784785,0.0061077876,0.42501628,0.00008302847,0.00006984098,0.0007499687,0.0000012542698,0.000012058734,0.00011194556],"genre_scores_gemma":[0.08320216,0.0031388847,0.9133236,0.000048346203,0.000012957489,0.00009404188,0.000023481161,0.000023389468,0.00013315007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983821,0.00059655553,0.00034825967,0.00033453794,0.000099434415,0.00023913394],"domain_scores_gemma":[0.99877006,0.0005793707,0.00010677832,0.00039254208,0.00012527673,0.000025951105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001656798,0.00013617818,0.0003924062,0.00018024724,0.000046054793,0.0000069576176,0.0001477337,0.00015236864,0.00017866779],"category_scores_gemma":[0.00006951916,0.00008187649,0.00006298272,0.00035174718,0.00021349596,0.00001057451,0.000041911964,0.0001822227,0.0000012039791],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00079506607,0.000044114946,0.0015108787,0.000011159787,0.0001631386,7.8591904e-7,0.00034364974,0.000010370638,0.7670046,0.000072489645,0.0000013775975,0.23004237],"study_design_scores_gemma":[0.0012576741,0.00040118216,0.0065433085,0.000025380274,0.000009537977,0.0000072846933,0.00023065996,0.0003255707,0.9801015,0.00014818604,0.010855598,0.00009409882],"about_ca_topic_score_codex":0.000014074346,"about_ca_topic_score_gemma":0.0000017379888,"teacher_disagreement_score":0.4883073,"about_ca_system_score_codex":0.000054437518,"about_ca_system_score_gemma":0.00007686271,"threshold_uncertainty_score":0.33388263},"labels":[],"label_agreement":null},{"id":"W2970208248","doi":"10.1007/978-1-4939-9748-0_14","title":"Mouse Models for Use in Cryptosporidium Infection Studies and Quantification of Parasite Burden Using Flow Cytometry, qPCR, and Histopathology","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Cryptosporidium; Cryptosporidium parvum; Histopathology; Flow cytometry; Biology; Parasite hosting; Diarrhea; Polymerase chain reaction; Real-time polymerase chain reaction; Virology; Pathogenesis; Microbiology; Immunology; Pathology; Medicine; Feces; Gene","score_opus":0.0699928673579532,"score_gpt":0.41343647913325093,"score_spread":0.34344361177529775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970208248","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53151494,0.002274036,0.4656725,0.0000112584175,0.000256378,0.00024596264,0.000011305269,0.0000071905765,0.00000640003],"genre_scores_gemma":[0.6618063,0.0006223508,0.33740082,0.000039528757,0.000007875226,0.000046372323,0.00003420481,0.0000133429685,0.0000292129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998228,0.0007961603,0.0003758281,0.00035619544,0.000011445069,0.0002323311],"domain_scores_gemma":[0.9986045,0.000934639,0.00014394503,0.00020455642,0.000100954305,0.000011450718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010407993,0.00014658838,0.00046669808,0.00046109688,0.000042593114,0.000004881879,0.000046709618,0.0003428767,0.000003973415],"category_scores_gemma":[0.0008268641,0.00014319042,0.000041352614,0.00019416257,0.0002728508,0.00006543225,0.000065440836,0.00015801862,0.0000014256574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008412802,0.000042473017,0.09202476,0.00006120764,0.000038891292,0.000001908433,0.00022644161,0.003133169,0.8967281,0.0048615914,0.000002111021,0.002795242],"study_design_scores_gemma":[0.005479023,0.0012139243,0.05333246,0.00015264122,0.00021213485,0.00025266985,0.00038499688,0.035352983,0.8683717,0.033719856,0.0007933232,0.0007342535],"about_ca_topic_score_codex":0.00044088333,"about_ca_topic_score_gemma":0.000051884737,"teacher_disagreement_score":0.13029133,"about_ca_system_score_codex":0.000052940588,"about_ca_system_score_gemma":0.000024596284,"threshold_uncertainty_score":0.5839136},"labels":[],"label_agreement":null},{"id":"W2970221466","doi":"10.1007/978-1-4939-9698-8_19","title":"Quantification of Extracellular Matrix Fiber Systems Related to ADAMTS Proteins","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"ADAMTS; Thrombospondin; Fibronectin; Extracellular matrix; Cell biology; Disintegrin; Cell adhesion; Matrix metalloproteinase; Biology; Chemistry; Metalloproteinase; Cell; Biochemistry","score_opus":0.014602693855685744,"score_gpt":0.35268557716472526,"score_spread":0.3380828833090395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970221466","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41485018,0.004041297,0.5787501,0.00006560397,0.000376458,0.0013023664,0.000014193991,0.000014904175,0.00058495975],"genre_scores_gemma":[0.4512774,0.000031466396,0.54456574,0.000054702326,0.000039831877,0.00021649664,0.00013318364,0.000049252092,0.0036319126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997569,0.0009664461,0.00052066776,0.0005533769,0.00009194012,0.00029854602],"domain_scores_gemma":[0.99892884,0.000025084113,0.00017934266,0.0006983292,0.00009700759,0.00007136408],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001382613,0.00018861234,0.0003257105,0.00015787888,0.00001875234,0.000008589441,0.0002797529,0.00042898543,0.00006046914],"category_scores_gemma":[0.0002486597,0.00018257696,0.00010928936,0.00025205588,0.000043247106,0.0000030834492,0.00013697393,0.00014095618,0.00007512636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063958,0.000054087206,0.00021282453,0.000046891884,0.00003334511,0.0000036346673,0.000016357764,0.000581215,0.98648125,0.010878889,0.00002936735,0.0015981786],"study_design_scores_gemma":[0.00038167616,0.00051226746,0.000033221793,0.00004080938,0.0000103733155,0.000011773711,0.000021756961,0.0003257094,0.97917515,0.0011078643,0.018167872,0.00021151514],"about_ca_topic_score_codex":0.000043569922,"about_ca_topic_score_gemma":0.000001399391,"teacher_disagreement_score":0.03642725,"about_ca_system_score_codex":0.000019338537,"about_ca_system_score_gemma":0.00005797997,"threshold_uncertainty_score":0.7445272},"labels":[],"label_agreement":null},{"id":"W2970308143","doi":"10.1007/978-1-4939-9690-2_22","title":"Metabolic Profiling Using In Vivo High Field Flow NMR","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"","keywords":"Nuclear magnetic resonance spectroscopy; Context (archaeology); Biological system; Organism; Nuclear magnetic resonance; Chemistry; Chemical physics; Physics; Biology; Genetics","score_opus":0.02582938811309769,"score_gpt":0.34717859211404156,"score_spread":0.32134920400094386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970308143","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8228361,0.00007130835,0.17575721,0.00008862479,0.000073132076,0.00014433515,0.0000022417676,0.000009766919,0.001017271],"genre_scores_gemma":[0.3617201,0.0000061919386,0.6377031,0.00051666977,0.000008363715,0.000010438149,0.000002749394,0.0000036882302,0.000028705286],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987859,0.0004102247,0.00018890045,0.00031939748,0.000047443646,0.00024811068],"domain_scores_gemma":[0.9996125,0.00015764814,0.00003508927,0.00015853831,0.0000028989662,0.00003332508],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00036700274,0.00009880596,0.00020801481,0.000037752816,0.000015093933,0.0000037703962,0.00017864339,0.00014352192,0.0009270523],"category_scores_gemma":[0.00018604379,0.00007543958,0.00004709923,0.00030338875,0.00006798873,0.000025880487,0.00019498741,0.00017155446,0.00003714312],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008634417,0.000034601144,0.01208511,0.0000019684505,0.0000025924248,0.0000030950102,0.000012283518,0.003263769,0.9783887,0.0009738815,0.000001825094,0.0052235266],"study_design_scores_gemma":[0.00017138016,0.000049465823,0.002737862,0.000004730049,0.000003216183,0.0000013933085,0.000010138715,0.014016376,0.95252925,0.029904677,0.00044819215,0.00012330295],"about_ca_topic_score_codex":0.00036056462,"about_ca_topic_score_gemma":0.0000138235755,"teacher_disagreement_score":0.46194592,"about_ca_system_score_codex":0.000031184645,"about_ca_system_score_gemma":0.0000051368856,"threshold_uncertainty_score":0.99998623},"labels":[],"label_agreement":null},{"id":"W2970310206","doi":"10.1007/978-1-4939-9698-8_18","title":"Biophysical Techniques to Analyze Elastic Tissue Extracellular Matrix Proteins Interacting with ADAMTS Proteins","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Fibronectin; Extracellular matrix; ADAMTS; Chemistry; Thrombospondin; Biophysics; Proteoglycan; Cell biology; Fibril; Proteases; Cleavage (geology); Vitronectin; Biochemistry; Biology; Matrix metalloproteinase; Metalloproteinase","score_opus":0.008890307497120014,"score_gpt":0.3490907806288074,"score_spread":0.3402004731316874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970310206","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2721765,0.00034913054,0.7252371,0.00013037928,0.00013201927,0.0016321094,0.000008225594,0.000040301667,0.00029424665],"genre_scores_gemma":[0.27534932,0.0000071147956,0.72324854,0.00017544955,0.00013583973,0.00044526148,0.000047318026,0.00005869553,0.0005324224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971767,0.0007994151,0.00040764172,0.0009161817,0.00013402486,0.00056602893],"domain_scores_gemma":[0.99882126,0.00004800855,0.00015684112,0.00072772417,0.0001002824,0.00014588665],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008093376,0.00036662768,0.00044538366,0.00022599497,0.0000484829,0.000030019348,0.0004079889,0.00037941392,0.000055702716],"category_scores_gemma":[0.00038109918,0.00031350876,0.00010829503,0.00036717337,0.00007412562,0.000008575318,0.0003174982,0.00034538636,0.00004563506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021292514,0.0001103276,0.00019112625,0.000038261252,0.00004792131,0.000041771025,0.000029089226,0.000044802375,0.99195737,0.0013659796,0.000017192748,0.0059432164],"study_design_scores_gemma":[0.00035918836,0.002509688,0.000014101424,0.000110768924,0.000019904757,0.000040579802,0.000031520078,0.00013306181,0.9813771,0.00063188747,0.014341588,0.00043056466],"about_ca_topic_score_codex":0.000055978362,"about_ca_topic_score_gemma":0.000014601447,"teacher_disagreement_score":0.014324396,"about_ca_system_score_codex":0.000043271437,"about_ca_system_score_gemma":0.000096234005,"threshold_uncertainty_score":0.9999317},"labels":[],"label_agreement":null},{"id":"W2970509846","doi":"10.1007/978-1-4939-9690-2_24","title":"Automated Tools for the Analysis of 1D-NMR and 2D-NMR Spectra","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"NMR spectra database; Bottleneck; Nuclear magnetic resonance spectroscopy; Automation; Computer science; Deconvolution; Proton NMR; Annotation; Spectrometer; Metabolomics; Software; Analytical Chemistry (journal); Nuclear magnetic resonance; Chemistry; Spectral line; Artificial intelligence; Engineering; Physics; Chromatography; Algorithm; Embedded system","score_opus":0.019982552913249838,"score_gpt":0.37431028036033054,"score_spread":0.3543277274470807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2970509846","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5185748,0.0060490686,0.47389826,0.00023685294,0.00015639135,0.0005178213,0.0000541378,0.000015508613,0.0004972176],"genre_scores_gemma":[0.45603105,0.0014025164,0.5416976,0.00039996792,0.000048355185,0.00009566221,0.00012313465,0.000027771423,0.00017395061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984873,0.0003653555,0.00034282135,0.00045782755,0.00005329564,0.00029339705],"domain_scores_gemma":[0.99888945,0.00035939703,0.00014862213,0.0004979897,0.00007245047,0.0000321116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001259673,0.00018082652,0.0005376933,0.00022463125,0.000040291037,0.000015748827,0.00024878004,0.00019393582,0.00002496452],"category_scores_gemma":[0.0006698265,0.00013126024,0.00022826689,0.00050597586,0.00015691532,0.0000024154544,0.00018711199,0.00009189713,6.886931e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064229505,0.00003097949,0.004640623,0.000016686237,0.001242656,6.2854156e-7,0.000027966833,0.0002455419,0.9807101,0.0061781644,0.00003711172,0.006805303],"study_design_scores_gemma":[0.0015378231,0.00086194265,0.035714954,0.000008355611,0.00121591,0.000007789847,0.00026657165,0.01496391,0.9084279,0.0030919334,0.03340327,0.0004996286],"about_ca_topic_score_codex":0.000030066363,"about_ca_topic_score_gemma":0.000028207327,"teacher_disagreement_score":0.072282195,"about_ca_system_score_codex":0.00000923599,"about_ca_system_score_gemma":0.000027662038,"threshold_uncertainty_score":0.5352637},"labels":[],"label_agreement":null},{"id":"W2971979166","doi":"10.1007/978-1-4939-9794-7_12","title":"Detection of Tumor Antigen-Specific T-Cell Responses After Oncolytic Vaccination","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre; St. Joseph’s Healthcare Hamilton; University of Guelph","funders":"","keywords":"Oncolytic virus; Immunosurveillance; Antigen; CD8; Immune system; Immunotherapy; Tumor microenvironment; Immunology; Biology; Cancer research; Cytotoxic T cell; T cell; Cancer immunotherapy; Acquired immune system; In vitro","score_opus":0.01988710566641489,"score_gpt":0.3836633245698654,"score_spread":0.3637762189034505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2971979166","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8375901,0.0034302361,0.15798627,0.000026069867,0.0001780807,0.00039419218,0.0000073902656,0.000008105535,0.00037953682],"genre_scores_gemma":[0.93346137,0.00040605388,0.06559796,0.00015624745,0.000043274813,0.000072673414,0.000021401254,0.000036976526,0.00020403379],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968133,0.0018619229,0.00035674626,0.00052149314,0.00011038953,0.00033615102],"domain_scores_gemma":[0.99900943,0.00008928759,0.00012564694,0.0006085679,0.00011724418,0.000049835016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001619991,0.00018346828,0.00027500113,0.0002845932,0.000021113094,0.00000851717,0.00026600622,0.0002431497,0.00013040006],"category_scores_gemma":[0.0001601082,0.00018326133,0.00012661993,0.00030510148,0.000071222654,0.0000033469032,0.00012996065,0.00018274835,0.00002524338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0033340913,0.0000846827,0.0043699737,0.00002133123,0.00002167512,0.000008506598,0.00002316217,0.000047225585,0.9716609,0.000022257076,0.0000044862854,0.020401701],"study_design_scores_gemma":[0.00094066793,0.0027243523,0.004258571,0.000007778047,0.000003334168,0.000009048243,0.000025542879,0.000088728266,0.9861622,0.00036228355,0.00522981,0.00018769344],"about_ca_topic_score_codex":0.000010969882,"about_ca_topic_score_gemma":0.000030394893,"teacher_disagreement_score":0.095871255,"about_ca_system_score_codex":0.000044709424,"about_ca_system_score_gemma":0.00009236739,"threshold_uncertainty_score":0.747318},"labels":[],"label_agreement":null},{"id":"W2972137306","doi":"10.1007/978-1-4939-9794-7_18","title":"Generating Primary Models of Human Cancer to Aid in the Development of Clinically Relevant Oncolytic Viruses","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Ottawa Hospital","funders":"Canadian Institutes of Health Research","keywords":"Oncolytic virus; Cancer; Ovarian cancer; Immune system; Clinical trial; Medicine; In vivo; Computational biology; Pancreatic cancer; Melanoma; Cancer research; Bioinformatics; Biology; Immunology; Internal medicine; Biotechnology","score_opus":0.08252010814328115,"score_gpt":0.481433174163356,"score_spread":0.39891306602007487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972137306","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8978291,0.0008047017,0.10034642,0.00006407685,0.00005779333,0.000531309,0.000006400437,0.0000026157663,0.00035759108],"genre_scores_gemma":[0.44638604,0.00006932091,0.5520083,0.0012809498,0.000030856412,0.00014253486,0.000021367134,0.000027368511,0.000033279546],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99640805,0.0017350536,0.0009174811,0.00045173508,0.00015507123,0.00033260818],"domain_scores_gemma":[0.99893874,0.00014734908,0.00019135406,0.00058638013,0.00009435189,0.00004182013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004400496,0.00016820455,0.00041550153,0.00016023264,0.000025968538,0.0000047703325,0.00059595675,0.00022140941,0.00001870951],"category_scores_gemma":[0.00023521284,0.00013274084,0.000092676746,0.0002737738,0.000107551416,0.000002345934,0.00026666775,0.00020997698,0.000001749514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004995703,0.000110186375,0.005088935,0.000041269854,0.000044279797,0.0000018547282,0.00042728952,0.004745153,0.9707527,0.000107157575,0.000005184823,0.018176416],"study_design_scores_gemma":[0.0007622199,0.0019230339,0.00040671014,0.000043556145,0.0000060063057,0.0000013823663,0.00009040317,0.0003882075,0.99508995,0.0006766956,0.0004427318,0.00016912016],"about_ca_topic_score_codex":0.00006281579,"about_ca_topic_score_gemma":0.00040136988,"teacher_disagreement_score":0.45166185,"about_ca_system_score_codex":0.00004997648,"about_ca_system_score_gemma":0.00039566998,"threshold_uncertainty_score":0.5413014},"labels":[],"label_agreement":null},{"id":"W2972184766","doi":"10.1007/978-1-4939-9794-7_1","title":"Introduction to Oncolytic Virotherapy","year":2019,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Oncolytic virus; Virotherapy; Cancer research; Cancer; Virus; Biology; Tumor cells; Virology; Genetics","score_opus":0.06465942399875242,"score_gpt":0.49933589287661484,"score_spread":0.43467646887786243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972184766","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000407821,0.8360599,0.16105738,0.00018364465,0.000661265,0.0017083326,0.000024775532,0.000017786908,0.00024611063],"genre_scores_gemma":[3.096178e-7,0.85615283,0.14009109,0.0005166382,0.0010498668,0.00051637454,0.00033257742,0.00016019495,0.0011801191],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99253434,0.004301801,0.00074642315,0.0015289527,0.00014783899,0.00074064627],"domain_scores_gemma":[0.99777186,0.00010543036,0.00021161999,0.0016749145,0.00008105337,0.00015511595],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002518136,0.00062851456,0.0016478834,0.0006136216,0.000040255796,0.00002773207,0.000924225,0.0011233897,0.00016630867],"category_scores_gemma":[0.00049596996,0.0005688181,0.0005577703,0.000714635,0.00012908012,0.0000018617128,0.00035965495,0.0006174912,0.00026685555],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002044883,0.000054508404,0.0000014254599,0.00061521045,0.00017770134,0.000007104952,0.0000073295214,0.000022973116,0.20979401,0.00007977814,0.0005089338,0.78852654],"study_design_scores_gemma":[0.00033209773,0.0029381914,2.5588557e-7,0.00024772543,0.00007851662,0.000034096163,0.0000033434494,0.0000037569373,0.031894863,0.00014992162,0.96375835,0.00055887207],"about_ca_topic_score_codex":0.00001127369,"about_ca_topic_score_gemma":0.000026354048,"teacher_disagreement_score":0.96324944,"about_ca_system_score_codex":0.00017479624,"about_ca_system_score_gemma":0.0004922192,"threshold_uncertainty_score":0.99967635},"labels":[],"label_agreement":null},{"id":"W2972226514","doi":"10.1007/978-1-4939-9794-7_8","title":"A Functional Assay to Determine the Capacity of Oncolytic Viruses to Induce Immunogenic Tumor Cell Death","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"Agence Nationale de la Recherche","keywords":"Oncolytic virus; Immunogenic cell death; Programmed cell death; Immunotherapy; Immune system; Cancer research; Biology; Lysis; Dendritic cell; Cell; Virology; Immunology; Apoptosis","score_opus":0.07360573567964601,"score_gpt":0.3827832620691747,"score_spread":0.30917752638952867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972226514","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54649186,0.00597104,0.39957735,0.0005381439,0.0013711622,0.004734322,0.0004899067,0.000038083504,0.040788133],"genre_scores_gemma":[0.10545579,0.0006135765,0.73855454,0.022648597,0.001324361,0.0010590184,0.0006381215,0.0010082393,0.12869777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962505,0.0012499522,0.00067140337,0.0009914631,0.00026438053,0.00057230855],"domain_scores_gemma":[0.9975575,0.00029012313,0.00026189044,0.0014925958,0.000242258,0.0001555951],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026043903,0.0005377007,0.0007445644,0.0003690493,0.000059357717,0.000016031765,0.0009769511,0.000683485,0.00020992117],"category_scores_gemma":[0.00053035107,0.00044485595,0.00037630135,0.00014963462,0.0002142371,0.0000019938473,0.0007078545,0.00063214154,0.000100831734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012128523,0.000051095798,0.00008412634,0.000034468158,0.00017691105,0.000012484216,0.000029143854,0.00018553434,0.99195844,0.00077129964,0.00015467261,0.0053289486],"study_design_scores_gemma":[0.00054923934,0.0038108444,0.00007633685,0.00004479938,0.000051121366,0.000027808648,0.000007395217,0.000014648997,0.94253063,0.0016042914,0.050805837,0.00047702846],"about_ca_topic_score_codex":0.00006396867,"about_ca_topic_score_gemma":0.0001630928,"teacher_disagreement_score":0.44103608,"about_ca_system_score_codex":0.00012909713,"about_ca_system_score_gemma":0.0005760251,"threshold_uncertainty_score":0.9998003},"labels":[],"label_agreement":null},{"id":"W2972338642","doi":"10.1007/978-1-4939-9837-1_10","title":"Nuclear Transfer and Cloning","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CReATe Fertility Centre; Ottawa Fertility Centre","funders":"","keywords":"Reprogramming; Cloning (programming); Biology; Cell biology; Somatic cell; Somatic cell nuclear transfer; Embryonic stem cell; Cytoplast; Embryo; clone (Java method); Genetics; Oocyte; Gene; Computational biology; Molecular biology; Embryogenesis; Computer science; Blastocyst; Programming language","score_opus":0.023186465751872914,"score_gpt":0.355023536007206,"score_spread":0.33183707025533304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972338642","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007416466,0.019694246,0.43468276,0.0003778526,0.0006971159,0.0015146856,0.000096995835,0.000047195175,0.5354727],"genre_scores_gemma":[0.0047504823,0.009223584,0.5945912,0.002161856,0.00043122817,0.000052487772,0.00078813866,0.0006872153,0.38731378],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9975948,0.0004493568,0.0003845163,0.0009882419,0.000117049676,0.00046608632],"domain_scores_gemma":[0.99904144,0.00006368146,0.000062522864,0.0006682317,0.000058645597,0.00010548439],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00094413606,0.0004164775,0.00055829366,0.00023403861,0.000039762683,0.000020485628,0.00038643758,0.0012666142,0.00014612878],"category_scores_gemma":[0.00010188891,0.0004223448,0.00019117276,0.000035001536,0.0002916034,0.0000016309378,0.0004126944,0.0006025309,0.00004564926],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007335411,0.000011391419,0.00006695342,0.00006952711,0.00011714242,0.00004397212,0.000016674208,0.000008494337,0.9556571,0.032138407,0.000083889114,0.011713069],"study_design_scores_gemma":[0.0010575787,0.00074730074,0.00003448175,0.00011157982,0.00005947353,0.0001073027,0.000010806419,0.00009161618,0.16861428,0.00885463,0.81938,0.0009309797],"about_ca_topic_score_codex":0.000010213557,"about_ca_topic_score_gemma":0.000009183047,"teacher_disagreement_score":0.81929606,"about_ca_system_score_codex":0.00003027633,"about_ca_system_score_gemma":0.00010045102,"threshold_uncertainty_score":0.99982285},"labels":[],"label_agreement":null},{"id":"W2972407461","doi":"10.1007/978-1-4939-9837-1_7","title":"Generation of Large Fragment Knock-In Mouse Models by Microinjecting into 2-Cell Stage Embryos","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Toronto Centre for Phenogenomics; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Gene knockin; CRISPR; Germline; Biology; Mutant; Homologous recombination; Computational biology; Fragment (logic); Genetics; Embryo; Genome editing; Cell biology; Gene; Computer science; Algorithm","score_opus":0.015428192358722325,"score_gpt":0.38777653180374955,"score_spread":0.3723483394450272,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972407461","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49888578,0.0017023376,0.49897128,0.000009609489,0.00008209872,0.0001655154,0.000011470252,0.0000037740326,0.00016814389],"genre_scores_gemma":[0.5915317,0.00015752489,0.40724316,0.0001278995,0.000027127977,0.000029600227,0.00014600385,0.00003354771,0.00070343306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835575,0.00039919617,0.00039225348,0.00046599182,0.000058565118,0.00032827668],"domain_scores_gemma":[0.99941725,0.000024395566,0.00009029515,0.0003920611,0.000035635494,0.000040371844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084005797,0.00018633323,0.00027810995,0.00012538489,0.000015802218,0.0000060951174,0.00018939469,0.00027674175,0.000019226489],"category_scores_gemma":[0.00006119045,0.0001994002,0.00008292681,0.00012766568,0.000026269965,0.0000030136491,0.0001577589,0.00015499594,0.0000020351515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018850918,0.00008337131,0.0018427116,0.000048466416,0.00001486611,0.0000016207682,0.00010510421,0.01673625,0.97991884,0.00016253148,0.000026345162,0.0010410532],"study_design_scores_gemma":[0.0008147273,0.00019033584,0.00001734833,0.000007824193,0.0000042863107,0.00000135987,0.00010831799,0.015586227,0.9815913,0.0001220886,0.0013539393,0.00020224176],"about_ca_topic_score_codex":0.00009995147,"about_ca_topic_score_gemma":0.000050182123,"teacher_disagreement_score":0.092645936,"about_ca_system_score_codex":0.000028466948,"about_ca_system_score_gemma":0.000033976812,"threshold_uncertainty_score":0.81313044},"labels":[],"label_agreement":null},{"id":"W2972584372","doi":"10.1007/978-1-4939-9837-1_5","title":"Targeted Mutations in the Mouse via Embryonic Stem Cells","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Toronto Centre for Phenogenomics","funders":"","keywords":"Embryonic stem cell; Homologous recombination; Gene targeting; CRISPR; Biology; Transfection; Cas9; Mutant; Gene; Stem cell; Genetics; Cell biology; Genome editing; Molecular biology","score_opus":0.010301279744532443,"score_gpt":0.3723419286719466,"score_spread":0.36204064892741417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972584372","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4201982,0.0010306531,0.5780052,0.00008220449,0.00015273113,0.00026148173,0.000004638835,0.0000069219195,0.00025797868],"genre_scores_gemma":[0.7358627,0.000087943146,0.26271975,0.00062660273,0.00004781157,0.000091926326,0.000089463785,0.000037500973,0.00043631214],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983043,0.0007251453,0.000233714,0.00036820283,0.00005429905,0.00031435466],"domain_scores_gemma":[0.9993552,0.0000635269,0.000043515367,0.0004848202,0.000023010274,0.000029913846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008577246,0.00015963774,0.00018612866,0.000107701504,0.000019181862,0.000009973834,0.0003271247,0.00021652726,0.000020111316],"category_scores_gemma":[0.00003984676,0.000132092,0.00008434558,0.00022849714,0.000050629187,0.00000146287,0.00008849315,0.000194859,0.000016144839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001092781,0.000029948087,0.0012690789,0.000010429975,0.0000150594815,0.0000054530633,0.00009088974,0.003933551,0.9908812,0.00020076624,0.000022698703,0.0035300215],"study_design_scores_gemma":[0.00044183654,0.00015185497,0.00051358383,0.0000035324865,0.0000070096075,0.000011759344,0.00015017022,0.0010724141,0.9904258,0.00035291284,0.006686913,0.00018221281],"about_ca_topic_score_codex":0.000024035506,"about_ca_topic_score_gemma":0.000029819303,"teacher_disagreement_score":0.31566447,"about_ca_system_score_codex":0.000014767699,"about_ca_system_score_gemma":0.000029912822,"threshold_uncertainty_score":0.5386555},"labels":[],"label_agreement":null},{"id":"W2972908337","doi":"10.1007/978-1-4939-9650-6_18","title":"Immunophenotyping of Paroxysmal Nocturnal Hemoglobinuria (PNH)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Complement system in diseases","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Paroxysmal nocturnal hemoglobinuria; Medicine; Hemoglobinuria; Immunophenotyping; Hemolysis; Eculizumab; Immunology; Disease; Internal medicine; Flow cytometry; Antibody","score_opus":0.015511779937171002,"score_gpt":0.36394095203527915,"score_spread":0.34842917209810814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2972908337","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8356348,0.007966578,0.15092865,0.000086804845,0.001888488,0.00057692674,0.00003063211,0.000044418528,0.0028426605],"genre_scores_gemma":[0.8681135,0.00001167786,0.13130945,0.00014954734,0.000014566951,0.000031578158,0.00006301441,0.000022316919,0.00028433933],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962951,0.0022245876,0.000625074,0.0003960397,0.000026843512,0.0004323851],"domain_scores_gemma":[0.9987481,0.00038457254,0.00023941713,0.0005521139,0.000057634064,0.000018113184],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011428529,0.00020684848,0.0005760748,0.00021469154,0.000031636115,0.0000045239476,0.00045071816,0.00027069583,0.0019019948],"category_scores_gemma":[0.00025266275,0.00019073332,0.0001675265,0.00021626256,0.00018228308,0.000026041216,0.0002431196,0.0002648152,0.00017555691],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012886507,0.00006922681,0.03571965,0.000041524378,0.0001286596,0.0000039648985,0.0000837333,0.000031330535,0.9494427,0.008653167,0.00004651685,0.0056506624],"study_design_scores_gemma":[0.0025838513,0.0003479296,0.013221059,0.00009930831,0.000046161367,0.000060027447,0.00020126658,0.00002850445,0.9629868,0.008270978,0.011793164,0.0003609517],"about_ca_topic_score_codex":0.000111986425,"about_ca_topic_score_gemma":0.00000458626,"teacher_disagreement_score":0.03247867,"about_ca_system_score_codex":0.000051805797,"about_ca_system_score_gemma":0.00006531842,"threshold_uncertainty_score":0.9990104},"labels":[],"label_agreement":null},{"id":"W2974277693","doi":"10.1007/978-1-61737-970-3","title":"Cell-Based Microarrays","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Office of Naval Research; Centre National de la Recherche Scientifique; Flinders University; University of New South Wales; David Geffen School of Medicine, University of California, Los Angeles; University of Tokyo; U.S. Naval Research Laboratory; Yale University; Eberhard Karls Universität Tübingen; Universität Heidelberg; Indigenous and Northern Affairs Canada; Commonwealth Scientific and Industrial Research Organisation; University of California, Los Angeles","keywords":"DNA microarray; Throughput; Computational biology; Microarray; Function (biology); Cell; Computer science; Biology; Gene expression; Gene; Cell biology; Genetics; Operating system","score_opus":0.01204320744416876,"score_gpt":0.3751861716119323,"score_spread":0.36314296416776354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974277693","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000102402926,0.0013432519,0.93411887,0.00014660179,0.0002154183,0.0004666402,0.00006087803,0.000050638235,0.06349529],"genre_scores_gemma":[0.000116232426,0.0001224487,0.93948406,0.0011981552,0.00019527986,0.0000963375,0.0011718712,0.00011226655,0.057503358],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978389,0.00031569388,0.00042557798,0.0009340267,0.00006613679,0.0004196766],"domain_scores_gemma":[0.9983347,0.00005562073,0.00025216045,0.0011767232,0.00009409617,0.00008666669],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0005693304,0.00044596376,0.00045157858,0.00018043474,0.000056625035,0.000013248849,0.00053344766,0.0018931201,0.00002726312],"category_scores_gemma":[0.00012486798,0.0004569025,0.000260976,0.00009600928,0.00034381144,7.338859e-7,0.00023479508,0.0008292306,0.000011625071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017533386,0.000044302684,0.000009816283,0.00002365231,0.000013992725,0.0000093538865,0.000002098729,0.000017021697,0.9885997,0.0015111717,0.004169443,0.0055818707],"study_design_scores_gemma":[0.00017343085,0.0001017505,0.0000012203046,0.000013531018,0.000015368836,0.000007083056,6.9918275e-7,0.000016759366,0.51713175,0.0122151645,0.47002113,0.00030208167],"about_ca_topic_score_codex":0.0000061313463,"about_ca_topic_score_gemma":0.000014167565,"teacher_disagreement_score":0.47146797,"about_ca_system_score_codex":0.000046833047,"about_ca_system_score_gemma":0.00034856176,"threshold_uncertainty_score":0.9997883},"labels":[],"label_agreement":null},{"id":"W2974281126","doi":"10.1007/978-1-4939-9865-4_14","title":"Emerging Genome Engineering Tools in Crop Research and Breeding","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"","keywords":"Genome editing; Transcription activator-like effector nuclease; Biology; CRISPR; Zinc finger nuclease; Genome engineering; Genome; Epigenome; Biotechnology; Computational biology; Cas9; Genetics; Gene; DNA methylation; Gene expression","score_opus":0.04870684557916598,"score_gpt":0.44724307358131377,"score_spread":0.3985362280021478,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974281126","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019892108,0.04095118,0.8791666,0.00014737957,0.0007869975,0.001155167,0.00004388987,0.000036829726,0.057819832],"genre_scores_gemma":[0.029974975,0.0064580953,0.90463704,0.0002729854,0.00086190057,0.0001474398,0.0005305341,0.0005882844,0.05652874],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9978156,0.00015069263,0.00045604352,0.0008597557,0.00011601742,0.000601871],"domain_scores_gemma":[0.99912673,0.0001251263,0.000064725034,0.00052949064,0.000072483715,0.00008145164],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018694898,0.00037545024,0.00051416294,0.0006305181,0.000028066932,0.00003112414,0.0003243304,0.0008631715,0.000028516077],"category_scores_gemma":[0.00032660135,0.00042581072,0.000095421485,0.00010492631,0.000119065444,0.00000279565,0.0005666718,0.00081083825,0.000006219598],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019539866,0.000007801264,0.00016735011,0.00009190476,0.00004654184,0.000038141243,0.00003999433,0.0014514604,0.9803024,0.008424511,0.000007916689,0.009402442],"study_design_scores_gemma":[0.0022965183,0.0017659563,0.0012876238,0.0006758658,0.000056330893,0.00019962636,0.00009127003,0.0023225155,0.37021032,0.0125188865,0.60571337,0.002861741],"about_ca_topic_score_codex":0.000017345099,"about_ca_topic_score_gemma":0.000018697905,"teacher_disagreement_score":0.6100921,"about_ca_system_score_codex":0.000059606562,"about_ca_system_score_gemma":0.00007033485,"threshold_uncertainty_score":0.9998194},"labels":[],"label_agreement":null},{"id":"W2974728347","doi":"10.1007/978-1-4939-9865-4_15","title":"CRISPR/Cas9-Mediated Targeted Mutagenesis in Wheat Doubled Haploids","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Saskatchewan Research Council (Canada)","funders":"","keywords":"Genome editing; Microspore; CRISPR; Doubled haploidy; Ploidy; Biology; Cas9; Mutagenesis; Genetics; Genome; Gene; Mutant; Computational biology; Botany; Stamen","score_opus":0.010014425322039399,"score_gpt":0.39315852753502334,"score_spread":0.38314410221298395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2974728347","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56863415,0.0026872228,0.42690694,0.0001059183,0.00042786522,0.00037133088,0.000009204295,0.000024088093,0.0008332878],"genre_scores_gemma":[0.6852599,0.0002640036,0.31317088,0.0005084021,0.000073962765,0.00009874112,0.00021793756,0.00007255198,0.00033365193],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975056,0.00063323084,0.0004589174,0.00072907883,0.00008304994,0.0005901067],"domain_scores_gemma":[0.9990985,0.000074260366,0.00006381045,0.00062134454,0.00004817323,0.00009394313],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009583616,0.00030746835,0.00043797152,0.0002894399,0.00001960628,0.000013263531,0.00034456482,0.00050867395,0.00010743593],"category_scores_gemma":[0.0003132302,0.0003139476,0.00013595898,0.00041242843,0.00006865457,0.0000030544452,0.00020632442,0.00024942003,0.000032406784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007843749,0.00005247195,0.02009842,0.000026125546,0.000035568344,0.000022693055,0.000043364897,0.0015519995,0.9746896,0.00012250459,0.000032831034,0.0032459544],"study_design_scores_gemma":[0.0016518984,0.00027219867,0.0059766886,0.000017162776,0.0000115099465,0.000016773245,0.00006162155,0.0011918801,0.9795983,0.00029559428,0.01047683,0.00042953342],"about_ca_topic_score_codex":0.000097744116,"about_ca_topic_score_gemma":0.00007520194,"teacher_disagreement_score":0.116625726,"about_ca_system_score_codex":0.00003684996,"about_ca_system_score_gemma":0.00006915289,"threshold_uncertainty_score":0.9999313},"labels":[],"label_agreement":null},{"id":"W2975414703","doi":"10.1007/978-1-4939-9744-2_17","title":"Using the Object-Oriented PowerShell for Simple Proteomics Data Analysis","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Scripting language; Computer science; Disk formatting; Programming language; Python (programming language); XML; XHTML; World Wide Web; Operating system; Markup language","score_opus":0.05814741101028796,"score_gpt":0.4605564730521581,"score_spread":0.4024090620418701,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2975414703","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02854788,0.00009387933,0.9699797,0.00008434566,0.000021906932,0.00059293694,0.00014254948,0.00003699417,0.0004997808],"genre_scores_gemma":[0.0071419748,0.000011727993,0.9920043,0.00014408428,0.000020044658,0.00018414835,0.0003991684,0.000021163962,0.00007338844],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988141,0.00013333514,0.00026448956,0.0005001882,0.00003795885,0.00024990735],"domain_scores_gemma":[0.9980827,0.00022203877,0.00014148369,0.0014845368,0.000044690405,0.000024525587],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00081777835,0.00012856958,0.00026248256,0.000078378784,0.00005838412,0.000010578567,0.0006582003,0.00016682579,0.00008152867],"category_scores_gemma":[0.00021791224,0.0001020094,0.00010581143,0.00044587755,0.00006950595,0.000024325702,0.0003364729,0.00019511873,0.0000011313703],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017551925,0.00001924677,0.0021098494,0.000013100939,0.00009454897,3.53003e-7,0.000018185581,0.00044137173,0.9880798,0.007879328,0.0000047644116,0.0013218871],"study_design_scores_gemma":[0.00022988957,0.00001676357,0.0000057482666,0.000003935533,0.00013044881,0.000002101926,0.00006822884,0.07518685,0.8705595,0.035800453,0.017831989,0.00016405435],"about_ca_topic_score_codex":0.000060862232,"about_ca_topic_score_gemma":0.000008209001,"teacher_disagreement_score":0.11752027,"about_ca_system_score_codex":0.000047114292,"about_ca_system_score_gemma":0.000033831988,"threshold_uncertainty_score":0.41598225},"labels":[],"label_agreement":null},{"id":"W2977489313","doi":"10.1007/978-1-4939-9873-9_10","title":"Informed Use of Protein–Protein Interaction Data: A Focus on the Integrated Interactions Database (IID)","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":27,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Interpretability; Computer science; Relevance (law); Protocol (science); Variety (cybernetics); Focus (optics); Data science; Database; Data mining; Artificial intelligence; Medicine","score_opus":0.05220209688057935,"score_gpt":0.38051404992285603,"score_spread":0.32831195304227667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977489313","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36304343,0.0001537631,0.6333639,0.00045498012,0.00039366828,0.0012563121,0.00017101847,0.000013267993,0.0011496481],"genre_scores_gemma":[0.5395319,0.000059092763,0.45749167,0.00076843315,0.000077966986,0.00015439508,0.0013800015,0.000040955627,0.0004956078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980161,0.00067861215,0.00054212695,0.0004029854,0.0000760561,0.00028409925],"domain_scores_gemma":[0.99790215,0.00021916199,0.00028834867,0.001461251,0.000083312334,0.00004576394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009897421,0.00022281318,0.00027104325,0.00013902556,0.000038002203,0.000030413965,0.000589406,0.00021646649,0.00007020731],"category_scores_gemma":[0.001041336,0.00015864937,0.00008938611,0.000232831,0.00012705514,0.000022153485,0.0005483031,0.0004263178,0.00001896111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024061221,0.000066921806,0.00012479312,0.000025392825,0.00008467721,0.0000014744251,0.000036230365,0.000116816096,0.9783415,0.0056359195,0.00026281446,0.015062817],"study_design_scores_gemma":[0.00081579894,0.00067879545,0.0000745525,0.00022860327,0.000025524918,0.00001962149,0.00027111618,0.007941768,0.88071024,0.002773473,0.106076606,0.00038388555],"about_ca_topic_score_codex":0.00016977401,"about_ca_topic_score_gemma":0.00021725202,"teacher_disagreement_score":0.17648847,"about_ca_system_score_codex":0.00003240608,"about_ca_system_score_gemma":0.00013841066,"threshold_uncertainty_score":0.64695334},"labels":[],"label_agreement":null},{"id":"W2977524178","doi":"10.1007/978-1-4939-9818-0_17","title":"Isolating Male Meiocytes from Maize and Wheat for “-Omics” Analyses","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Saskatchewan Research Council (Canada)","funders":"","keywords":"Biology; RNA; Meiocyte; Computational biology; RNA-Seq; Gene; Genome; Gene expression; Biotechnology; Genetics; Transcriptome; Meiosis","score_opus":0.03195146158113073,"score_gpt":0.4392926296810088,"score_spread":0.4073411680998781,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977524178","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3236618,0.0016606118,0.6733974,0.00016805448,0.000061564555,0.0004638558,0.000051003604,0.000015610809,0.00052006106],"genre_scores_gemma":[0.13718027,0.00020487205,0.8609233,0.0007722156,0.000059229733,0.00022339333,0.0004205102,0.000034938086,0.00018127717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998159,0.0003959393,0.00033117042,0.0007424736,0.00003384989,0.00033755339],"domain_scores_gemma":[0.99910045,0.00013258115,0.00011409299,0.0005388831,0.000052815765,0.000061158724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055120524,0.00023083985,0.00035329623,0.00009503002,0.000052512754,0.000017084914,0.00025523326,0.00042577545,0.000038974045],"category_scores_gemma":[0.00020298304,0.000220378,0.00013783711,0.00011551104,0.0001285915,0.0000026197529,0.00023060695,0.00013502792,0.00000351227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005159661,0.000024793451,0.01035983,0.00001027781,0.00006308434,0.0000011802666,0.000010886067,0.000020934776,0.98212063,0.0020844375,0.000049055976,0.0052033155],"study_design_scores_gemma":[0.00066555134,0.00028776538,0.0006250342,0.000009998577,0.000032935994,0.000015118791,0.00003317239,0.0009277512,0.9731814,0.011568548,0.012360551,0.00029216654],"about_ca_topic_score_codex":0.00008614706,"about_ca_topic_score_gemma":0.000017683797,"teacher_disagreement_score":0.18752585,"about_ca_system_score_codex":0.000013671002,"about_ca_system_score_gemma":0.000032229214,"threshold_uncertainty_score":0.89867544},"labels":[],"label_agreement":null},{"id":"W2977780635","doi":"10.1007/978-1-4939-9873-9_13","title":"Perform Pathway Enrichment Analysis Using ReactomeFIViz","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Institute for Cancer Research","funders":"National Human Genome Research Institute","keywords":"Pathway analysis; Biological pathway; Computational biology; Visualization; Computer science; Set (abstract data type); Gene; Data mining; Biology; Genetics; Gene expression","score_opus":0.021560261644239898,"score_gpt":0.33621269360355804,"score_spread":0.31465243195931814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2977780635","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018437319,0.0039173174,0.84514505,0.000032072287,0.00055367086,0.0005277624,0.00008683135,0.000014840718,0.14787874],"genre_scores_gemma":[0.005843134,0.0011745438,0.9060008,0.0016550488,0.00045214678,0.00003119481,0.0022727745,0.00021123467,0.08235912],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974561,0.00022199766,0.0008047339,0.0008413668,0.00013071684,0.00054511154],"domain_scores_gemma":[0.99808997,0.00005138587,0.00046762876,0.0011879008,0.000093354436,0.00010975337],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012893503,0.0005832689,0.0009674966,0.0005196,0.00004983329,0.000026577287,0.0004912622,0.0015553272,0.00020034862],"category_scores_gemma":[0.000049836468,0.00056250946,0.0006540492,0.00015093516,0.00015572456,0.0000024808066,0.0005032947,0.0005668789,0.000026036998],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016045933,0.000080977756,0.0012153208,0.00015378722,0.0048969253,0.000051890504,0.0001217588,0.0026524907,0.81667465,0.07942349,0.00026681722,0.09430146],"study_design_scores_gemma":[0.0018616945,0.0011971612,0.0001314785,0.00014957326,0.0021274365,0.000070288195,0.000055511322,0.0113861365,0.04248791,0.047754515,0.8892396,0.0035387112],"about_ca_topic_score_codex":0.000020254844,"about_ca_topic_score_gemma":0.000026262593,"teacher_disagreement_score":0.88897276,"about_ca_system_score_codex":0.000106957195,"about_ca_system_score_gemma":0.00023477711,"threshold_uncertainty_score":0.99974084},"labels":[],"label_agreement":null},{"id":"W2978425865","doi":"10.1007/978-1-4939-9873-9_1","title":"Predicting Protein–Protein Interactions Using SPRINT","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Sprint; Interactome; Computer science; Function (biology); Throughput; Computational biology; Biology; Software engineering; Operating system; Genetics","score_opus":0.01817261392784411,"score_gpt":0.35875082279641163,"score_spread":0.3405782088685675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2978425865","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46857384,0.0001834073,0.52893484,0.0000328424,0.00019557487,0.00037523214,0.0000033457827,0.000008962752,0.0016919886],"genre_scores_gemma":[0.48724034,0.0000037017653,0.5122117,0.00016219383,0.00007652672,0.00003776278,0.000024661396,0.000022275704,0.00022089343],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835813,0.00040884595,0.00040639844,0.00039502935,0.000052543528,0.00037904174],"domain_scores_gemma":[0.9992287,0.000017559654,0.0001479213,0.00049591705,0.000047612775,0.00006226007],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008364806,0.00019647101,0.00023948775,0.0001048381,0.000043797336,0.000019814015,0.0002526834,0.00026658233,0.00005669653],"category_scores_gemma":[0.00012116456,0.00019275876,0.000117419004,0.00014189913,0.000069136906,0.0000042537467,0.00030486533,0.00029092495,0.000018338253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030864994,0.000026043253,0.0034393745,0.000019826452,0.0000392254,0.0000021218427,0.00002954495,0.00063063565,0.98235935,0.0023005577,0.0000028711356,0.011119561],"study_design_scores_gemma":[0.00080581,0.00030505465,0.00043353165,0.000084113584,0.00001557758,0.000043703458,0.00009720308,0.017571881,0.9577387,0.009981689,0.012450434,0.00047230994],"about_ca_topic_score_codex":0.00008981303,"about_ca_topic_score_gemma":0.000019004592,"teacher_disagreement_score":0.024620682,"about_ca_system_score_codex":0.000034657554,"about_ca_system_score_gemma":0.00007614727,"threshold_uncertainty_score":0.7860474},"labels":[],"label_agreement":null},{"id":"W2979472862","doi":"10.1007/978-1-4939-9790-9_7","title":"Enzymatic Conversions of Glutamate and γ-Aminobutyric Acid as Indicators of Plant Stress Response","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"GABA and Rice Research","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Glutamate dehydrogenase; Glutamate receptor; Glutamate decarboxylase; Biochemistry; Glutamate synthase; Amino acid; Enzyme; Citric acid cycle; Metabolism; Chemistry; Glutamic acid; Biology","score_opus":0.01708680383089374,"score_gpt":0.350388090028894,"score_spread":0.33330128619800026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2979472862","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9985713,0.00046346404,0.00030251712,0.00017398353,0.00004397585,0.00019222366,0.000063432206,0.0000056581903,0.00018347232],"genre_scores_gemma":[0.98572487,0.000094516334,0.0140796155,0.00003147762,0.000004034279,0.0000057841526,0.000017485556,8.1790165e-7,0.000041404648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99772555,0.0015499942,0.00023042929,0.00020126287,0.0000877579,0.00020502455],"domain_scores_gemma":[0.9987667,0.0009687222,0.00010760892,0.00007623803,0.000025123521,0.000055563083],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013146682,0.0000851464,0.0002743894,0.000086316555,0.0000216097,0.000003427611,0.00020590013,0.00014506058,0.00016487236],"category_scores_gemma":[0.00036141265,0.000033573764,0.000050260263,0.0003948752,0.0001737611,0.000014660266,0.0001470104,0.000117835705,0.0000056478543],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013065386,0.000039951217,0.033791557,0.00002764645,0.000013212537,0.000005872328,0.000096175,9.296432e-7,0.9560187,0.00073835725,0.0000013852626,0.009135571],"study_design_scores_gemma":[0.00022188832,0.00067832693,0.17767717,0.00003545747,0.0000075393014,0.000008952913,0.0005204848,0.000049791073,0.81968313,0.00077087776,0.000256773,0.000089608395],"about_ca_topic_score_codex":0.00013272701,"about_ca_topic_score_gemma":0.000008486652,"teacher_disagreement_score":0.14388561,"about_ca_system_score_codex":0.000008648234,"about_ca_system_score_gemma":0.000016586766,"threshold_uncertainty_score":0.18052368},"labels":[],"label_agreement":null},{"id":"W2980203649","doi":"10.1007/978-1-4939-9736-7_12","title":"Protein–Protein Interaction Profiling in Candida albicans Revealed by Biochemical Purification–Mass Spectrometry (BP/MS)","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Candida albicans; Mass spectrometry; Chemistry; Chromatography; Protein–protein interaction; Biochemistry; Biology; Microbiology","score_opus":0.012146203273085828,"score_gpt":0.3114401405125909,"score_spread":0.29929393723950504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980203649","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012625015,0.0064169206,0.894252,0.00038507034,0.00055510906,0.0033718618,0.00020507803,0.00003669894,0.08215225],"genre_scores_gemma":[0.012520448,0.000495246,0.9165811,0.00074369606,0.00042190406,0.00040994395,0.003708791,0.00025087554,0.06486798],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967146,0.00039568584,0.0010713834,0.0010533583,0.0001449552,0.00062000257],"domain_scores_gemma":[0.99822456,0.00004823125,0.00055674004,0.00096492306,0.000090028836,0.00011554506],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012876829,0.0006155302,0.0007939073,0.00038539147,0.00003953594,0.00003404057,0.00057324755,0.0018273481,0.000120075136],"category_scores_gemma":[0.00018529475,0.00063785986,0.0002522552,0.00014336745,0.00020144744,0.000006155964,0.00024837657,0.0011423737,0.00002710265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013543808,0.00003589357,0.00006490517,0.00010522119,0.000103518425,0.000008708119,0.000014334973,0.000020007965,0.9855421,0.0101476265,0.00030884473,0.003513401],"study_design_scores_gemma":[0.0014089876,0.0005644227,0.0000115675975,0.0003651277,0.000052177864,0.00003288621,0.000032470172,0.00053653284,0.8643151,0.029773438,0.10155821,0.0013490717],"about_ca_topic_score_codex":0.00005893537,"about_ca_topic_score_gemma":0.000029783627,"teacher_disagreement_score":0.121226996,"about_ca_system_score_codex":0.00020988425,"about_ca_system_score_gemma":0.0002417751,"threshold_uncertainty_score":0.99960726},"labels":[],"label_agreement":null},{"id":"W2980488887","doi":"10.1007/978-1-4939-9814-2_16","title":"Analysis and Sorting of Individual HSV-1 Particles by Flow Virometry","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Viral tegument; Flow cytometry; Capsid; Herpes simplex virus; Biology; Sorting; Computational biology; Glycoprotein; Virology; Cell biology; Virus; Molecular biology; Computer science","score_opus":0.01867968967692392,"score_gpt":0.3971057726895028,"score_spread":0.3784260830125789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2980488887","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7883128,0.000484159,0.21075383,0.00003284861,0.000028219552,0.00010173215,0.000009450437,0.000007631851,0.00026933497],"genre_scores_gemma":[0.6095877,0.000015159312,0.3902627,0.00007988618,0.0000030834826,0.0000068733593,0.000018707135,0.000005317936,0.000020522233],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99897355,0.00037150318,0.00024044582,0.00021062695,0.00005205016,0.00015179602],"domain_scores_gemma":[0.99953675,0.0001415217,0.00007153171,0.0001876948,0.000018888106,0.00004360686],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072254986,0.000082905084,0.000365871,0.00029149634,0.00001363182,0.0000037470545,0.000038145314,0.00011256253,0.00010075963],"category_scores_gemma":[0.00018576579,0.00006812605,0.00008162293,0.0006070647,0.00006622346,0.000011639907,0.000050459097,0.000096636184,0.0000037885234],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001030292,0.00008027409,0.55914533,0.000010344468,0.00052683905,0.000004622036,0.000047218025,0.00001047846,0.28327802,0.00006272606,0.0000012174611,0.15682259],"study_design_scores_gemma":[0.0020540834,0.0005721488,0.19173755,0.000024057697,0.001345843,0.00001724272,0.00011447385,0.002323895,0.7989428,0.0016122338,0.0010717467,0.00018391453],"about_ca_topic_score_codex":0.000075342956,"about_ca_topic_score_gemma":0.0000048597167,"teacher_disagreement_score":0.51566476,"about_ca_system_score_codex":0.000014036353,"about_ca_system_score_gemma":0.0000131557845,"threshold_uncertainty_score":0.27780998},"labels":[],"label_agreement":null},{"id":"W2982611761","doi":"10.1007/978-1-0716-0138-9_8","title":"Sequence-Defined DNA Amphiphiles for Drug Delivery: Synthesis and Self-Assembly","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Amphiphile; Sequence (biology); Drug delivery; DNA; Computational biology; Combinatorial chemistry; Nanotechnology; Chemistry; Computer science; Materials science; Biology; Biochemistry; Organic chemistry; Copolymer","score_opus":0.02079424277995434,"score_gpt":0.34188775612722533,"score_spread":0.321093513347271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2982611761","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.040175714,0.017661737,0.88923836,0.0014812761,0.0009136519,0.004359768,0.0011801851,0.0004977656,0.044491533],"genre_scores_gemma":[0.010275903,0.004024165,0.9740577,0.000661033,0.0001734154,0.00009271398,0.00044448947,0.0001587109,0.0101118935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997274,0.0003666417,0.0005408152,0.0012324292,0.00009469652,0.0004914219],"domain_scores_gemma":[0.9983229,0.00029722427,0.0003469967,0.00077105296,0.00016787127,0.000093965224],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011078516,0.0006139387,0.0009063907,0.00029613002,0.00007030775,0.000024380433,0.0003469014,0.001177467,0.000003428551],"category_scores_gemma":[0.0003365813,0.00056832953,0.00038122575,0.00005848321,0.00025874612,0.0000031129987,0.00029395515,0.0002705663,0.0000025934728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008149905,0.000029101202,0.000042006443,0.00007908731,0.0003048774,0.000011508788,0.000008511711,0.0000013998591,0.96269757,0.008523302,0.00016027059,0.028060881],"study_design_scores_gemma":[0.00031331828,0.00030577963,0.0000060555285,0.00010697312,0.00026806674,0.000031588846,0.000009219308,0.00008157155,0.85355973,0.024991741,0.11953823,0.0007877178],"about_ca_topic_score_codex":0.000016253463,"about_ca_topic_score_gemma":0.000048204496,"teacher_disagreement_score":0.11937796,"about_ca_system_score_codex":0.000064648964,"about_ca_system_score_gemma":0.0001577885,"threshold_uncertainty_score":0.9996768},"labels":[],"label_agreement":null},{"id":"W2985078384","doi":"10.1007/978-1-4939-9904-0_10","title":"NanoString nCounter Technology: High-Throughput RNA Validation","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; BC Cancer Agency; Bell (Canada); University of British Columbia","funders":"","keywords":"Nucleic acid; Multiplex; RNA; Gene expression; Computational biology; Gene; Biology; Molecular biology; Genetics","score_opus":0.01503251137545654,"score_gpt":0.3585662491587194,"score_spread":0.34353373778326285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2985078384","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022808495,0.0032326991,0.91603863,0.000606621,0.0005435739,0.001297673,0.00012509177,0.00012495948,0.07574989],"genre_scores_gemma":[0.0066552944,0.0019681174,0.906583,0.001460605,0.0003233245,0.0003471162,0.002773228,0.00033760918,0.079551704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99662715,0.00029741653,0.00078664056,0.0015675497,0.00012492907,0.00059634197],"domain_scores_gemma":[0.99752295,0.00004660637,0.00046113593,0.0017191467,0.00017124419,0.00007889701],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008317724,0.00068870914,0.00080527173,0.00055418967,0.0000784323,0.000023650135,0.0008572255,0.003040689,0.0001214135],"category_scores_gemma":[0.00016910637,0.00074273784,0.00033001884,0.00015800954,0.00042861316,0.0000037285604,0.0007562896,0.00082275225,0.00008297407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021847549,0.000028620165,0.00014300022,0.000026745896,0.00014186621,0.000016707336,0.0000033432125,0.000020416204,0.85124576,0.13215214,0.00035111763,0.015848415],"study_design_scores_gemma":[0.0004146889,0.00035269858,0.000010058579,0.00007288157,0.00006353191,0.00003985751,0.000004897454,0.000010289093,0.6064632,0.052486926,0.33939436,0.0006865866],"about_ca_topic_score_codex":0.000019895648,"about_ca_topic_score_gemma":0.00001659077,"teacher_disagreement_score":0.33904326,"about_ca_system_score_codex":0.000095038464,"about_ca_system_score_gemma":0.00020835343,"threshold_uncertainty_score":0.99950236},"labels":[],"label_agreement":null},{"id":"W2985774506","doi":"10.1007/978-1-0716-0146-4_6","title":"Lentiviral Vector Production in Suspension Culture Using Serum-Free Medium for the Transduction of CAR-T Cells","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Transduction (biophysics); Transfection; HEK 293 cells; Cell culture; Viral vector; Cell biology; Embryonic stem cell; Suspension culture; Molecular biology; Biology; Chemistry; Recombinant DNA; Gene; Genetics; Biophysics","score_opus":0.047780012112679175,"score_gpt":0.41883066683315656,"score_spread":0.3710506547204774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2985774506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8738969,0.00075817725,0.12103703,0.0010820692,0.0011745691,0.0019560584,0.000006639782,0.000011945646,0.00007659476],"genre_scores_gemma":[0.50597435,0.00025890063,0.49184513,0.000143255,0.0003066258,0.000088321016,0.000031330183,0.00006115435,0.0012909154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980138,0.0009005715,0.00030400633,0.00036740198,0.00013485676,0.00027937177],"domain_scores_gemma":[0.9990901,0.00017556496,0.00007756206,0.0005139391,0.00011660333,0.000026262858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022269916,0.00013129409,0.0003723845,0.00020498055,0.00002221367,0.0000037458344,0.00016154682,0.000226822,0.00014909725],"category_scores_gemma":[0.00037742214,0.000092449605,0.0001299534,0.0003992921,0.00013224801,0.00002752866,0.000048071015,0.00033562383,0.0000011026045],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004694646,0.00006654466,0.00210349,0.00010594234,0.000040984698,0.000003373874,0.0005918266,0.00021240076,0.9861176,0.00008531694,0.000015997231,0.010187057],"study_design_scores_gemma":[0.0015623542,0.00036985375,0.0013272419,0.00005072374,0.000041059477,0.000022980334,0.00024226656,0.0011137422,0.9924599,0.0011756538,0.0015473281,0.00008688343],"about_ca_topic_score_codex":0.00014577042,"about_ca_topic_score_gemma":0.000066020315,"teacher_disagreement_score":0.3708081,"about_ca_system_score_codex":0.00011372573,"about_ca_system_score_gemma":0.000079998914,"threshold_uncertainty_score":0.37699857},"labels":[],"label_agreement":null},{"id":"W29860408","doi":"10.1007/978-1-59745-419-3_8","title":"Short Linear Cationic Antimicrobial Peptides: Screening, Optimizing, and Prediction","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Quantitative structure–activity relationship; Antimicrobial peptides; Antimicrobial; Peptide; Computational biology; Chemistry; Combinatorial chemistry; Biology; Biochemistry; Stereochemistry; Microbiology","score_opus":0.027139953060475293,"score_gpt":0.33189608954473954,"score_spread":0.30475613648426425,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W29860408","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3667954,0.0010175701,0.63079375,0.00013539099,0.0003681746,0.00022358731,0.00003286121,0.0000774562,0.0005558296],"genre_scores_gemma":[0.3969483,0.0005987701,0.60113376,0.00037652766,0.000047625894,0.000022455015,0.00017369207,0.00003080182,0.0006680458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99788576,0.000775791,0.00038974726,0.0004975217,0.000018552048,0.0004326282],"domain_scores_gemma":[0.9994354,0.00014010782,0.00008463418,0.00026260279,0.000050668332,0.000026562093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056543184,0.00023998576,0.0004107668,0.00022571707,0.00023242412,0.00000870864,0.00017674667,0.00044199932,0.000051186664],"category_scores_gemma":[0.0001433991,0.0002345036,0.00010199766,0.00016695561,0.00074594904,0.00007770244,0.00015915906,0.0004313389,0.000017266942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005698958,0.000061435305,0.011670771,0.0000117261125,0.000077979304,0.00002003995,0.0002478636,0.00012588088,0.9796584,0.0005513852,0.00044180333,0.0070756874],"study_design_scores_gemma":[0.0012805903,0.00029875754,0.008177081,0.00006483615,0.00005506016,0.001294908,0.00014895745,0.00021621057,0.9759918,0.00037167204,0.011615714,0.00048440255],"about_ca_topic_score_codex":0.00014424392,"about_ca_topic_score_gemma":0.0000110533,"teacher_disagreement_score":0.030152928,"about_ca_system_score_codex":0.00002789565,"about_ca_system_score_gemma":0.000042642845,"threshold_uncertainty_score":0.95627797},"labels":[],"label_agreement":null},{"id":"W2986885921","doi":"10.1007/978-1-4939-9904-0_7","title":"Detection of Group II Intron-Generated Chimeric mRNAs in Bacterial Cells","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Intron; Group II intron; RNA splicing; Biology; Lactococcus lactis; Exon; Trans-splicing; RNA; Gene; Genetics; Messenger RNA; Molecular biology; Reverse transcriptase; Transcription (linguistics); Cell biology; Bacteria","score_opus":0.012972770002615498,"score_gpt":0.2918301645256339,"score_spread":0.2788573945230184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2986885921","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.061405756,0.0053710737,0.91147673,0.000047024427,0.0034155005,0.0017792413,0.00009539868,0.000041761996,0.01636752],"genre_scores_gemma":[0.063676775,0.0032584064,0.8993509,0.00047799895,0.0010281759,0.00023255704,0.0011915473,0.00065721193,0.030126458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99706674,0.00087717257,0.00073754106,0.0008416703,0.00009638075,0.00038048756],"domain_scores_gemma":[0.9987152,0.000046683217,0.00042858004,0.0006917009,0.000062556,0.00005525446],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011073755,0.00047540164,0.0008318012,0.00035211677,0.000024976327,0.000007781593,0.0003891075,0.0015453253,0.00010426927],"category_scores_gemma":[0.00012371213,0.00048389306,0.00025372763,0.00008729991,0.00014150921,0.0000024556111,0.00032308477,0.00035542838,0.000007993404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024263313,0.000035948553,0.000008301411,0.000037746882,0.00008989369,0.000006882815,0.000013083646,0.000026948052,0.962992,0.002688299,0.0000065728473,0.03385165],"study_design_scores_gemma":[0.0006340781,0.0009881799,0.000008516572,0.000054309025,0.000032913074,0.000009246253,0.000003618138,0.000021032572,0.94038975,0.004134261,0.053288832,0.0004352485],"about_ca_topic_score_codex":0.000052405532,"about_ca_topic_score_gemma":0.0000642787,"teacher_disagreement_score":0.053282257,"about_ca_system_score_codex":0.000046647445,"about_ca_system_score_gemma":0.00010663183,"threshold_uncertainty_score":0.9997613},"labels":[],"label_agreement":null},{"id":"W2988192735","doi":"10.1007/978-1-0716-0154-9_15","title":"Labeling Acidic Compartments of Neutrophils with Cresyl Violet","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Cresyl violet; Staining; Flow cytometry; Chemistry; Fluorescence; ALIZARIN RED; Biophysics; Fluorescence microscope; Stain; Molecular biology; Biology; Optics","score_opus":0.0166658314590496,"score_gpt":0.33909793396313176,"score_spread":0.32243210250408216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988192735","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82808924,0.0018791417,0.16820602,0.00011425978,0.00040925838,0.00046221403,0.000020654941,0.000032421238,0.0007868114],"genre_scores_gemma":[0.7465123,0.000059047823,0.2525443,0.0005051669,0.000010787734,0.000042512555,0.0000960886,0.000034305023,0.0001954726],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968819,0.0016905175,0.0004250417,0.00050277513,0.00003191929,0.00046785967],"domain_scores_gemma":[0.9990057,0.0002103174,0.00019274298,0.0004895037,0.00007710686,0.00002463204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071244413,0.000261465,0.00068264786,0.00025371774,0.00003856301,0.0000044355725,0.00034460865,0.00029064075,0.00037975074],"category_scores_gemma":[0.000053972308,0.00020304024,0.00009040669,0.00029657836,0.00033631787,0.000034039193,0.00015379468,0.00036647677,0.00014863654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022398277,0.00010737958,0.005166631,0.000021234704,0.00015430048,0.000018326955,0.00006492854,0.000041785956,0.9744073,0.016909499,0.000007191759,0.0028774159],"study_design_scores_gemma":[0.002105136,0.0008973045,0.0006693746,0.00006113518,0.000033202556,0.000032452863,0.00009226475,0.0000061781093,0.9901207,0.0029697963,0.0027839558,0.00022849224],"about_ca_topic_score_codex":0.00005847812,"about_ca_topic_score_gemma":0.0000061085584,"teacher_disagreement_score":0.0843383,"about_ca_system_score_codex":0.00002993051,"about_ca_system_score_gemma":0.00004625938,"threshold_uncertainty_score":0.8279741},"labels":[],"label_agreement":null},{"id":"W2988677739","doi":"10.1007/978-1-0716-0154-9_18","title":"In Vitro Assay for Sensitive Determination of Human Blood PMN Responses","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto","funders":"","keywords":"Flow cytometry; Degranulation; Phagocytosis; In vitro; Chemotaxis; Whole blood; Granulocyte; Human blood; Neutrophil extracellular traps; Cell biology; Chemistry; Reactive oxygen species; Extracellular; Cluster of differentiation; Biology; Molecular biology; Immunology; Biochemistry; Inflammation; Cell; Receptor","score_opus":0.02941786232692166,"score_gpt":0.3617159925379267,"score_spread":0.332298130211005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2988677739","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01847778,0.0031005188,0.95024663,0.00023626101,0.001970438,0.003087445,0.0008363879,0.00005227443,0.02199227],"genre_scores_gemma":[0.026163034,0.00024520644,0.7799105,0.0013333319,0.00011748214,0.00026382154,0.002067489,0.00029902687,0.1896001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958286,0.002251756,0.0007412771,0.00073743827,0.00003063946,0.00041024],"domain_scores_gemma":[0.99747753,0.0014018796,0.00046240762,0.00048149002,0.00016071898,0.00001595698],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0021417497,0.00044015923,0.0011839106,0.0008363366,0.00004367179,0.000003995297,0.00028635765,0.0014328677,0.00011458266],"category_scores_gemma":[0.0004160324,0.000431066,0.00027158548,0.0000669779,0.0003300096,0.000029991159,0.0001743565,0.0006304863,0.000028171713],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005232452,0.000056222503,0.00000664721,0.00005442255,0.00013913089,0.000060122784,0.0000852694,2.6722904e-7,0.8960984,0.09502479,0.0000068709082,0.0079446575],"study_design_scores_gemma":[0.0016926334,0.00071059813,0.000013234352,0.0001076951,0.00012181763,0.000033036857,0.000019507483,0.0000021405178,0.9380617,0.051923167,0.0069421814,0.00037224742],"about_ca_topic_score_codex":0.000028346629,"about_ca_topic_score_gemma":0.00001965204,"teacher_disagreement_score":0.17033611,"about_ca_system_score_codex":0.00006995966,"about_ca_system_score_gemma":0.0001103366,"threshold_uncertainty_score":0.9998635},"labels":[],"label_agreement":null},{"id":"W2994809464","doi":"10.1007/978-1-0716-0191-4_16","title":"Surface Plasmon Resonance-Based Method for Rapid Product Sialylation Assessment in Cell Culture","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal","funders":"","keywords":"Surface plasmon resonance; Biosensor; Recombinant DNA; Lectin; Chemistry; Cell culture; Nanotechnology; Biochemistry; Biology; Materials science; Nanoparticle","score_opus":0.02887907036950541,"score_gpt":0.40598558891989217,"score_spread":0.37710651855038674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994809464","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046615125,0.0060430346,0.944545,0.0003269911,0.00035293013,0.0030329432,0.0001368838,0.000017757224,0.04507835],"genre_scores_gemma":[0.000811564,0.00042979643,0.9394329,0.0003388069,0.000121144345,0.00016982481,0.0017783201,0.000121245066,0.05679641],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959746,0.0012015819,0.00068968226,0.0013735994,0.00020944396,0.00055108446],"domain_scores_gemma":[0.99829566,0.00017379336,0.00031757238,0.0008929193,0.00023873802,0.00008128839],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0029965586,0.0005277519,0.00073334354,0.000315793,0.00004859697,0.000025539211,0.00043515826,0.0012989809,0.000093357005],"category_scores_gemma":[0.00035022898,0.00051333726,0.00030262035,0.00012766819,0.00010740073,0.0000038442904,0.00017648422,0.00077179447,0.000009341732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038464833,0.00007526785,0.00025455953,0.00017850228,0.000038867878,0.00001056361,0.000019033007,0.0023699673,0.96241766,0.0049245767,0.00034501398,0.028981358],"study_design_scores_gemma":[0.0018796963,0.00073738827,0.000057419078,0.00006726021,0.000022037228,0.0000031893205,0.0000065009076,0.0032723576,0.54096067,0.0032791398,0.4491739,0.00054046616],"about_ca_topic_score_codex":0.0000335196,"about_ca_topic_score_gemma":0.00006750819,"teacher_disagreement_score":0.44882888,"about_ca_system_score_codex":0.00014688568,"about_ca_system_score_gemma":0.00062808435,"threshold_uncertainty_score":0.99999756},"labels":[],"label_agreement":null},{"id":"W2994965963","doi":"10.1007/7651_2019_271","title":"Multifunctional Magnetic Nanoparticles-Labeled Mesenchymal Stem Cells for Hyperthermia and Bioimaging Applications","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Nanoparticle-Based Drug Delivery","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Mesenchymal stem cell; Magnetic nanoparticles; Nanoparticle; Hyperthermia; Materials science; Nanotechnology; Stem cell; Biomedical engineering; Medicine; Cell biology; Pathology; Biology; Internal medicine","score_opus":0.024333149066971656,"score_gpt":0.3143405215642555,"score_spread":0.29000737249728387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2994965963","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07114796,0.0069110375,0.9114375,0.0004000472,0.0013258298,0.004142398,0.00047017678,0.00017612586,0.003988882],"genre_scores_gemma":[0.0051925676,0.000043510983,0.97631824,0.0005526245,0.00011258971,0.00048846117,0.000053847765,0.00012539973,0.017112743],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997721,0.00036671126,0.0005178706,0.00085245166,0.0001140176,0.00042791478],"domain_scores_gemma":[0.9983358,0.0007537058,0.00019737495,0.0005147946,0.0001085858,0.00008976917],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012012005,0.00033709497,0.00053469633,0.00020512214,0.000073868345,0.000037017628,0.0002726878,0.0003381818,0.00019278265],"category_scores_gemma":[0.00003921943,0.0003246973,0.00010816212,0.000060748975,0.00031946064,0.000037245623,0.00018048957,0.00019878699,0.0001434278],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005430827,0.000027289028,0.00003027584,0.0000572564,0.0000138544965,0.000006129256,0.000015784268,0.000049010345,0.94853634,0.024765907,0.000017753671,0.026426118],"study_design_scores_gemma":[0.00094609096,0.00020512806,0.000006190979,0.000035221863,0.00008617767,0.000015953205,0.00000934037,0.0015542629,0.9572154,0.0111710895,0.02834118,0.0004139459],"about_ca_topic_score_codex":0.00001350734,"about_ca_topic_score_gemma":0.000004954028,"teacher_disagreement_score":0.0659554,"about_ca_system_score_codex":0.00007970469,"about_ca_system_score_gemma":0.00013181152,"threshold_uncertainty_score":0.9999205},"labels":[],"label_agreement":null},{"id":"W2997116420","doi":"10.1007/978-1-0716-0227-0_10","title":"SPOT Synthesis: The Solid-Phase Peptide Synthesis on Planar Surfaces","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kinexus Bioinformatics Corporation (Canada)","funders":"","keywords":"Combinatorial chemistry; Solid-phase synthesis; Peptide; Computer science; Peptide synthesis; Planar; Nanotechnology; Phase (matter); Chemistry; Materials science; Computer graphics (images); Organic chemistry; Biochemistry","score_opus":0.02352684456492406,"score_gpt":0.3693355025398213,"score_spread":0.34580865797489724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997116420","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.036085706,0.025381222,0.18717314,0.0049908734,0.0017011048,0.0033346075,0.0016921188,0.00019135178,0.73944986],"genre_scores_gemma":[0.13415472,0.018561782,0.4365133,0.012234938,0.0033533883,0.0013777118,0.0020784927,0.002020082,0.3897056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99603105,0.0009913127,0.0007786984,0.0013533655,0.00022224127,0.00062332756],"domain_scores_gemma":[0.99646235,0.0013069761,0.0004365453,0.0015898695,0.00007789963,0.00012635632],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018077237,0.00079154683,0.0012149642,0.00022002695,0.00009921808,0.000039799037,0.0010446393,0.0013674061,0.000434459],"category_scores_gemma":[0.0017810658,0.0005751711,0.0008374857,0.000085284315,0.00040721358,0.0000022070574,0.00027705144,0.0006309149,0.000117719625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020115494,0.00010154466,0.000027755215,0.000043287393,0.00070174347,0.000039931125,0.000009360809,0.00006777828,0.95986813,0.0072462214,0.0007374684,0.030955624],"study_design_scores_gemma":[0.00026960718,0.00022261351,0.0000068485506,0.00017504008,0.00034202187,0.00001554202,0.000018931389,0.00006436277,0.76325995,0.0041720932,0.2307229,0.0007300944],"about_ca_topic_score_codex":0.000034045348,"about_ca_topic_score_gemma":0.000032087275,"teacher_disagreement_score":0.3497443,"about_ca_system_score_codex":0.000065983906,"about_ca_system_score_gemma":0.0001303967,"threshold_uncertainty_score":0.999929},"labels":[],"label_agreement":null},{"id":"W2997227913","doi":"10.1007/978-1-0716-0231-7_16","title":"Site-Specific Dual-Color Labeling of Long RNAs","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Dual (grammatical number); Computational biology; Computer science; Biology; Art; Literature","score_opus":0.021045153847821005,"score_gpt":0.35730221293935793,"score_spread":0.3362570590915369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997227913","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6793742,0.0025705867,0.31635377,0.000039561914,0.0003648511,0.0002627935,0.000013172154,0.000013701547,0.0010073764],"genre_scores_gemma":[0.35669267,0.00014144249,0.6422931,0.00029776018,0.000087593304,0.000029105151,0.000110298344,0.00005481221,0.0002932108],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740547,0.0009181958,0.00049162575,0.0006602778,0.00009660407,0.00042780122],"domain_scores_gemma":[0.9988121,0.000107432585,0.00018667214,0.0007223252,0.00010714205,0.000064337255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014725027,0.00024439648,0.00042849104,0.00016011788,0.00002451323,0.000008869096,0.00029433199,0.00043985038,0.000094899544],"category_scores_gemma":[0.00028584234,0.0002439044,0.00016928425,0.00023431647,0.00014702548,0.0000020109842,0.0002700437,0.00022319435,0.000037495258],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007783563,0.00006137311,0.009681301,0.000029083198,0.000040473908,0.000024560244,0.000047005673,0.00044963183,0.98386383,0.0011079191,0.000031987263,0.0045850277],"study_design_scores_gemma":[0.00071602745,0.00039204376,0.00038613033,0.000024560202,0.000011197954,0.000025681062,0.000024282503,0.000082451086,0.9888362,0.0006927049,0.008543822,0.0002648987],"about_ca_topic_score_codex":0.000023243249,"about_ca_topic_score_gemma":0.000010575268,"teacher_disagreement_score":0.32593936,"about_ca_system_score_codex":0.000023731658,"about_ca_system_score_gemma":0.000063334424,"threshold_uncertainty_score":0.9946133},"labels":[],"label_agreement":null},{"id":"W2997409239","doi":"10.1007/978-1-0716-0227-0_5","title":"Automated Solid-Phase Peptide Synthesis","year":2019,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kinexus Bioinformatics Corporation (Canada)","funders":"","keywords":"Peptide synthesis; Solid-phase synthesis; Combinatorial chemistry; Peptide; Computer science; Phase (matter); Chemistry; Nanotechnology; Materials science; Biochemistry; Organic chemistry","score_opus":0.018977637468567565,"score_gpt":0.3952218249664989,"score_spread":0.3762441874979313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997409239","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004717442,0.009700646,0.5396094,0.0004985193,0.00072794326,0.0011759849,0.00045882104,0.00029717613,0.44281408],"genre_scores_gemma":[0.008630911,0.0027671638,0.73418564,0.002051438,0.0007555594,0.00020320398,0.0019610631,0.00063651823,0.24880852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968288,0.0005049504,0.00075702043,0.0012315395,0.00013696111,0.00054071704],"domain_scores_gemma":[0.9980387,0.00023865064,0.00035629614,0.001133389,0.000095646974,0.00013728061],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009918757,0.00064706017,0.0011451117,0.0002663849,0.000041310803,0.000023632589,0.00060625724,0.0016106648,0.0005108272],"category_scores_gemma":[0.00087711227,0.00061498827,0.0007209353,0.00007884604,0.00024433568,0.0000017632408,0.00040945303,0.0004225905,0.00010188762],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006298079,0.00006788608,0.000024818599,0.000042329655,0.00043122546,0.0000360374,0.0000039822385,0.000024643861,0.9749581,0.0033016081,0.00075939484,0.020286998],"study_design_scores_gemma":[0.00051487866,0.00019668705,0.0000038744056,0.00010485013,0.00024550583,0.000020581652,0.0000045611446,0.00051433535,0.73883736,0.003926046,0.25480497,0.00082637335],"about_ca_topic_score_codex":0.000018638217,"about_ca_topic_score_gemma":0.000013336181,"teacher_disagreement_score":0.25404558,"about_ca_system_score_codex":0.000063037834,"about_ca_system_score_gemma":0.00014439433,"threshold_uncertainty_score":0.99968547},"labels":[{"model":"gpt","categories":["insufficient_payload"],"domain":null,"study_design":"not_applicable","genre":"other","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"grok","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"opus","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W2997488176","doi":"10.1007/978-1-0716-0231-7_1","title":"Biochemical Methods for the Study of the FinO Family of Bacterial RNA Chaperones","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"RNA; Non-coding RNA; Biology; Computational biology; Gene expression; Cell biology; Gene; Genetics","score_opus":0.02645089971373914,"score_gpt":0.38291154014043227,"score_spread":0.3564606404266931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997488176","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5504234,0.0010522846,0.44698027,0.000046561916,0.00046838514,0.00093917764,0.000009009547,0.0000023416717,0.00007856364],"genre_scores_gemma":[0.4626033,0.00004577952,0.5368441,0.00013983394,0.000066178334,0.00019309239,0.000010128209,0.000027533923,0.00007004889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966963,0.0021279657,0.00045128676,0.0004062976,0.00007154364,0.0002466297],"domain_scores_gemma":[0.9983867,0.0004203035,0.00023772803,0.0008489933,0.000082283565,0.000023983643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023615912,0.00018673859,0.00039627,0.000048136204,0.000037220012,0.0000048923107,0.00071792165,0.00028599406,0.000024343257],"category_scores_gemma":[0.0007578988,0.000111474445,0.00021712412,0.00015447267,0.00016075594,0.0000014801393,0.00033119984,0.00010609087,5.4930166e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020778466,0.000118822885,0.0004151839,0.000021079226,0.0001014245,1.202005e-7,0.000087300425,0.0000151101485,0.9691841,0.000740696,0.000010031942,0.02909833],"study_design_scores_gemma":[0.0008050519,0.0008431943,0.0005668815,0.000010331523,0.00004540181,0.0000020181394,0.00023780784,0.000056131328,0.99138266,0.0014922104,0.0044281823,0.00013012944],"about_ca_topic_score_codex":0.000039277467,"about_ca_topic_score_gemma":0.000004008064,"teacher_disagreement_score":0.08986382,"about_ca_system_score_codex":0.0000069093308,"about_ca_system_score_gemma":0.000052564814,"threshold_uncertainty_score":0.4545796},"labels":[],"label_agreement":null},{"id":"W2997491495","doi":"10.1007/978-1-0716-0231-7_6","title":"Use of tRNA-Mediated Suppression to Assess RNA Chaperone Function","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Transfer RNA; Chaperone (clinical); RNA; Cell biology; Computational biology; Biology; Chemistry; Genetics; Medicine; Gene","score_opus":0.05307395064401322,"score_gpt":0.39110347267582074,"score_spread":0.33802952203180753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2997491495","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5194531,0.00026009235,0.4794719,0.000074338684,0.00025958492,0.00021514902,0.00001275834,0.000005514766,0.0002475612],"genre_scores_gemma":[0.66940045,0.0001251343,0.32899237,0.0006499067,0.00004543808,0.00008123143,0.000195434,0.000029914558,0.00048013713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984203,0.0005683071,0.00029192673,0.00042603532,0.000066214234,0.00022724317],"domain_scores_gemma":[0.9991562,0.000055836706,0.0001022224,0.00053240004,0.00009192832,0.00006142753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005044562,0.00013977406,0.00023189002,0.00013156449,0.000017949696,0.000008263728,0.0001835084,0.00025778543,0.00007776611],"category_scores_gemma":[0.00029409793,0.00012715867,0.00007576765,0.00022686525,0.00005083041,0.0000043435975,0.00012299087,0.000103130056,0.000013862702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001369558,0.00005147668,0.003804221,0.000010088202,0.000026738704,6.801825e-7,0.000014492101,0.00034652438,0.98217595,0.0005409264,0.00009457392,0.012797352],"study_design_scores_gemma":[0.0003892671,0.00046484152,0.005852005,0.0000144296755,0.000011005228,0.00000211544,0.000021852522,0.00022175135,0.9489164,0.00018523875,0.04375494,0.00016615436],"about_ca_topic_score_codex":0.000039626866,"about_ca_topic_score_gemma":0.0000068022514,"teacher_disagreement_score":0.15047953,"about_ca_system_score_codex":0.000016993508,"about_ca_system_score_gemma":0.000046170382,"threshold_uncertainty_score":0.518538},"labels":[],"label_agreement":null},{"id":"W2998785973","doi":"10.1007/978-1-0716-0266-9_15","title":"Assessment of Immune Protective T Cell Repertoire in Humans Immunized with Novel Tuberculosis Vaccines","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"Canadian Institutes of Health Research","keywords":"Medicine; Tuberculosis; Tuberculosis vaccines; Immunology; Clinical trial; Immune system; Vaccination; BCG vaccine; Vaccine efficacy; Virology; Mycobacterium tuberculosis; Pathology","score_opus":0.038732251590234704,"score_gpt":0.42765075488562965,"score_spread":0.38891850329539496,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998785973","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50511724,0.0011351018,0.4852186,0.005770755,0.000033174725,0.0012084473,0.000010659024,0.000027735228,0.0014783056],"genre_scores_gemma":[0.4740554,0.00011869086,0.5247324,0.00081893126,0.000017596298,0.00019416634,0.000025125484,0.00002643474,0.000011227652],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99575734,0.0022493436,0.00077644613,0.0005894346,0.00012468839,0.00050276367],"domain_scores_gemma":[0.9985724,0.00048577238,0.00017751123,0.00049929786,0.0001362151,0.00012877544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021434315,0.00024700264,0.0011680089,0.0003176329,0.000028850782,0.0000033713857,0.00024214515,0.0002853301,0.00006652118],"category_scores_gemma":[0.0018469471,0.00018279911,0.00016353802,0.0007573428,0.00018906439,0.000027148306,0.00019012208,0.00079717505,0.0000012745371],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005463323,0.00030986388,0.093121506,0.00015265311,0.00012127816,0.0000680421,0.00022188258,0.00012337702,0.9025511,0.0005625905,0.000004443236,0.002216926],"study_design_scores_gemma":[0.009592807,0.0049173604,0.4105078,0.00020116189,0.00009924,0.000045606892,0.0005404936,0.005445882,0.56686944,0.0008365881,0.0005311348,0.00041248303],"about_ca_topic_score_codex":0.0009812802,"about_ca_topic_score_gemma":0.00005777344,"teacher_disagreement_score":0.33568168,"about_ca_system_score_codex":0.00011108414,"about_ca_system_score_gemma":0.00018180467,"threshold_uncertainty_score":0.7454331},"labels":[],"label_agreement":null},{"id":"W2998870162","doi":"10.1007/978-1-0716-0266-9_21","title":"Studying Peripheral T Cell Homeostasis in Mice: A Concise Technical Review","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôpital Maisonneuve-Rosemont; Université de Montréal","funders":"","keywords":"Homeostasis; Cell biology; Biology; T cell; Cell; Cell growth; Immunology; Immune system; Genetics","score_opus":0.04919201879916212,"score_gpt":0.39905077228248925,"score_spread":0.3498587534833271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2998870162","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000012657546,0.98580503,0.0099244835,0.00018785079,0.0009429701,0.0021430515,0.00005804952,0.00010709415,0.00081880443],"genre_scores_gemma":[0.000013465758,0.94875216,0.04893719,0.000787371,0.00003129867,0.00070549553,0.00042111918,0.00011203418,0.00023987758],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98230374,0.012696242,0.0021627962,0.0016242204,0.00004652335,0.0011664581],"domain_scores_gemma":[0.9972075,0.0010501335,0.00070925144,0.00091334357,0.00005909456,0.000060670514],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0025351036,0.0010703681,0.0058388268,0.0006010222,0.00008575079,0.000014039346,0.0014514056,0.0026066338,0.00056959986],"category_scores_gemma":[0.00091015414,0.00090472616,0.0009906552,0.001294794,0.000663651,0.000031763742,0.0009540112,0.0033361677,0.00036092356],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002671881,0.00021879074,0.000008298104,0.0073860376,0.00018139079,0.0003184657,0.000041276795,1.456859e-7,0.3320711,0.00014298878,0.00023598968,0.6593688],"study_design_scores_gemma":[0.0011121542,0.00036485263,7.132899e-7,0.0076188776,0.0006143186,0.0004245704,0.0000323155,3.5078375e-7,0.006363367,0.00016199029,0.98244154,0.00086493924],"about_ca_topic_score_codex":0.000085536434,"about_ca_topic_score_gemma":0.000024618235,"teacher_disagreement_score":0.98220557,"about_ca_system_score_codex":0.00035172055,"about_ca_system_score_gemma":0.00046207578,"threshold_uncertainty_score":0.99934036},"labels":[],"label_agreement":null},{"id":"W2999240762","doi":"10.1007/978-1-0716-0239-3_17","title":"Using MetaboAnalyst 4.0 for Metabolomics Data Analysis, Interpretation, and Integration with Other Omics Data","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":209,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University Health Centre; McGill University","funders":"National Cancer Institute","keywords":"Metabolomics; Omics; Interpretation (philosophy); Computational biology; Computer science; Data mining; Biology; Bioinformatics","score_opus":0.13866237583685204,"score_gpt":0.4836544271111078,"score_spread":0.34499205127425575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999240762","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000003714882,0.49220785,0.50604266,0.000018881115,0.00007345803,0.00048489094,0.001146014,0.0000055086507,0.000017026763],"genre_scores_gemma":[0.00000403956,0.49214768,0.5010046,0.00009525432,0.00007663599,0.000047213143,0.006565474,0.00005080301,0.000008351613],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951073,0.0015054875,0.00091761013,0.001999738,0.000087630244,0.00038224057],"domain_scores_gemma":[0.9964488,0.00021216164,0.0006814946,0.0024644241,0.000102982565,0.000090147056],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024136319,0.0006323238,0.0027265428,0.00054934615,0.000073286225,0.00006472456,0.001537205,0.00043774422,0.00000403121],"category_scores_gemma":[0.0013155144,0.00048140684,0.00026071465,0.0010443237,0.00021622317,0.000011326546,0.0017281465,0.00032094907,3.660452e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026638262,0.00010855298,0.00008418274,0.0013463976,0.021632906,0.000007155494,0.000040624596,0.000059502963,0.04691116,0.0046530017,0.000056957288,0.9248332],"study_design_scores_gemma":[0.00041881422,0.00022121181,0.0000013761114,0.00011619813,0.015125281,0.000021355823,0.000038929305,0.009774709,0.0008194179,0.00038429612,0.97245896,0.00061947363],"about_ca_topic_score_codex":0.00006207306,"about_ca_topic_score_gemma":0.0002551138,"teacher_disagreement_score":0.972402,"about_ca_system_score_codex":0.00003034896,"about_ca_system_score_gemma":0.00025156362,"threshold_uncertainty_score":0.9997638},"labels":[],"label_agreement":null},{"id":"W2999488915","doi":"10.1007/978-1-0716-0247-8_16","title":"Single-Stranded DNA Aptamers Against TNF and Their Potential Applications","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Aptamer; Tumor necrosis factor alpha; Monoclonal antibody; In vivo; Cytokine; Fusion protein; DNA; In vitro; Biology; Chemistry; Computational biology; Immunology; Molecular biology; Antibody; Recombinant DNA; Biochemistry; Gene; Genetics","score_opus":0.018536481020397524,"score_gpt":0.34206230215616423,"score_spread":0.3235258211357667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999488915","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08126004,0.0005305933,0.91679776,0.0007303207,0.00002590788,0.00022647053,0.000019139781,0.000043324253,0.000366446],"genre_scores_gemma":[0.54976755,0.00022439056,0.4481022,0.0016542969,0.00007714779,0.00002664162,0.00011653369,0.000019465566,0.00001175835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984219,0.00042699242,0.00026834029,0.0005846534,0.000038437192,0.0002596899],"domain_scores_gemma":[0.9994577,0.000022722414,0.00009142754,0.00027917908,0.00004692201,0.00010202359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029559957,0.00021500888,0.00027914176,0.000067953195,0.000053418484,0.0000147561095,0.00018034443,0.00027379082,0.0000012866409],"category_scores_gemma":[0.000102282494,0.00018282954,0.0001212464,0.00021412583,0.000264165,0.0000021562016,0.0001460215,0.00015199622,6.8031466e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036496967,0.000029757115,0.000075238866,0.0000072583175,0.000044078857,0.00000377915,0.000020024194,0.000007730757,0.89435637,0.000086022264,0.000014310463,0.10531895],"study_design_scores_gemma":[0.00030181746,0.00021406288,0.000023306233,0.0000042061283,0.000018320085,0.000010163027,0.00008982987,0.0003168509,0.9787264,0.0010334769,0.019036021,0.00022556605],"about_ca_topic_score_codex":0.0000026642501,"about_ca_topic_score_gemma":0.000004069569,"teacher_disagreement_score":0.46869555,"about_ca_system_score_codex":0.00000984049,"about_ca_system_score_gemma":0.000021097801,"threshold_uncertainty_score":0.7455572},"labels":[],"label_agreement":null},{"id":"W2999626348","doi":"10.1007/978-1-0716-0266-9_18","title":"Investigating T Cell Receptor Signals In Situ by Two-Photon Microscopy of Thymocytes Expressing Genetic Reporters in Low-Density Chimeras","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"T-cell receptor; Thymocyte; Cell biology; Biology; Major histocompatibility complex; T cell; Live cell imaging; Chimera (genetics); Immunology; Cell; Antigen; Immune system; Genetics","score_opus":0.019068544327423026,"score_gpt":0.3173410784342006,"score_spread":0.29827253410677756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2999626348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9644058,0.007849151,0.026517864,0.00021188841,0.00033577924,0.00041367396,0.000011511457,0.00003358288,0.00022077106],"genre_scores_gemma":[0.8208007,0.00012644679,0.1780617,0.00081347115,0.000011272947,0.000035356807,0.0000858589,0.000032767577,0.00003238375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99324965,0.003969296,0.001215086,0.0008497605,0.00003396373,0.00068220973],"domain_scores_gemma":[0.9985494,0.00047375594,0.000491292,0.0003960728,0.000043881286,0.000045609846],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011586372,0.00036568957,0.0009845678,0.00028177805,0.000053223364,0.000009241939,0.00043573676,0.0006588574,0.000109884444],"category_scores_gemma":[0.0006104462,0.00036926038,0.00012931266,0.00050719624,0.00067435973,0.000040367366,0.00028913023,0.0008687711,0.000022696437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011346962,0.00017197951,0.023046356,0.0000662342,0.000041828047,0.000043133205,0.0011738666,0.00008277489,0.97337794,0.000013974979,0.000048889866,0.0018195676],"study_design_scores_gemma":[0.0020614367,0.00027858067,0.0005355305,0.00010553449,0.000017023916,0.000021881968,0.0002599886,0.000045749028,0.99542856,0.0005763437,0.00033516507,0.000334189],"about_ca_topic_score_codex":0.0007333528,"about_ca_topic_score_gemma":0.000045442874,"teacher_disagreement_score":0.15154384,"about_ca_system_score_codex":0.00006294432,"about_ca_system_score_gemma":0.0001061159,"threshold_uncertainty_score":0.99987596},"labels":[],"label_agreement":null},{"id":"W3000009125","doi":"10.1007/978-1-0716-0266-9_14","title":"Assessing the Impact of Phytochemicals on Immune Checkpoints: Implications for Cancer Immunotherapy","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genomics, phytochemicals, and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; Acadia University","funders":"","keywords":"Phytochemical; Immune system; Cancer cell; Cancer; Cancer immunotherapy; Cancer research; Immunotherapy; Effector; Programmed cell death; Biology; Antibody; Chemistry; Immunology; Biochemistry; Apoptosis","score_opus":0.05187666865373,"score_gpt":0.4578084878409604,"score_spread":0.4059318191872304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000009125","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015048896,0.028784487,0.9219031,0.0023071368,0.00048667917,0.0035345787,0.0014385196,0.000052260435,0.026444387],"genre_scores_gemma":[0.13407375,0.009138087,0.8350397,0.004028717,0.002123725,0.0027519653,0.0042426125,0.001261738,0.007339755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978003,0.00026025018,0.0007290512,0.0007943041,0.00005965007,0.0003564396],"domain_scores_gemma":[0.9979534,0.00022448145,0.00062051386,0.00093416125,0.00020111466,0.00006629941],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00056326465,0.0005058278,0.00081486534,0.000093646755,0.000053059182,0.000021513679,0.00071093696,0.00072527904,0.000030264373],"category_scores_gemma":[0.00037217926,0.00038778657,0.0008165158,0.00006338826,0.00042828618,0.00000280104,0.00019414407,0.00041876142,0.0000011847252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014065953,0.000044193945,0.00010056943,0.000032306918,0.00049367157,4.0042295e-7,0.000026662583,0.00005946293,0.98113203,0.0045246133,0.00016811001,0.013277321],"study_design_scores_gemma":[0.000676704,0.0004567054,0.0004590519,0.00008293028,0.0000559435,0.0000033597353,0.000011910486,0.000017894128,0.9345806,0.0490393,0.014183762,0.00043178687],"about_ca_topic_score_codex":0.000038957885,"about_ca_topic_score_gemma":0.0000030491278,"teacher_disagreement_score":0.11902484,"about_ca_system_score_codex":0.00009198541,"about_ca_system_score_gemma":0.00023530981,"threshold_uncertainty_score":0.9998574},"labels":[],"label_agreement":null},{"id":"W3000224423","doi":"10.1007/978-1-0716-0239-3_10","title":"Metabolomic Data Exploration and Analysis with the Human Metabolome Database","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Metabolome; Metabolomics; Computer science; Database; Bioinformatics; Biology","score_opus":0.06271488750821079,"score_gpt":0.39162568163575884,"score_spread":0.32891079412754803,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3000224423","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09108782,0.007683344,0.8974151,0.003219528,0.000037237034,0.00025378107,0.000121966164,0.000012481521,0.0001687473],"genre_scores_gemma":[0.24017288,0.00193683,0.75277674,0.0028591738,0.00015121291,0.00008784077,0.001921806,0.000042047028,0.000051479423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99742573,0.0010208801,0.00028443895,0.0008911103,0.0000843029,0.00029352383],"domain_scores_gemma":[0.99865746,0.000057575602,0.00013961509,0.0010129833,0.00004864873,0.000083722196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013298373,0.00024358301,0.00049544434,0.00014239055,0.00011680163,0.000031056712,0.0006196189,0.00011816927,0.000016159085],"category_scores_gemma":[0.0003549623,0.00016063485,0.00007286686,0.0007884337,0.0002699393,0.000011440092,0.0009050258,0.00019568414,0.000001192941],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057263347,0.00002195819,0.0025945427,0.0000075521007,0.00090729154,0.000005499178,0.000062883264,0.00005453534,0.99024683,0.0040260847,0.0001242213,0.0018913271],"study_design_scores_gemma":[0.0025514942,0.0009854572,0.006538631,0.0000057743405,0.003358343,0.000019045568,0.0008546731,0.0033906887,0.8043858,0.0024665338,0.17425644,0.001187132],"about_ca_topic_score_codex":0.00003957723,"about_ca_topic_score_gemma":0.00010048182,"teacher_disagreement_score":0.18586107,"about_ca_system_score_codex":0.0000044382477,"about_ca_system_score_gemma":0.000027794715,"threshold_uncertainty_score":0.6550499},"labels":[],"label_agreement":null},{"id":"W3003386920","doi":"10.1007/978-1-0716-0290-4_21","title":"Genome Editing in Zebrafish Using High-Fidelity Cas9 Nucleases: Choosing the Right Nuclease for the Task","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"AGADA Biosciences; Dalhousie University; Agricultural Research Institute of Ontario","funders":"","keywords":"Cas9; Genome editing; CRISPR; Computational biology; Biology; Zebrafish; Mutagenesis; Nuclease; Genome; Genetics; Computer science; Mutation; Gene","score_opus":0.020226550463352113,"score_gpt":0.3906998122064582,"score_spread":0.37047326174310613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003386920","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19895408,0.0022195815,0.796732,0.0012549517,0.000279595,0.0004722856,0.000027653381,0.000012722051,0.000047100086],"genre_scores_gemma":[0.73127764,0.0000593766,0.26579836,0.0021251272,0.0005658359,0.00006451311,0.000047537476,0.000054843902,0.0000067926626],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979459,0.0005751954,0.00041942723,0.0005359026,0.00006686705,0.0004567145],"domain_scores_gemma":[0.9991394,0.00019279779,0.000100142955,0.00043658086,0.00005055265,0.00008052417],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012091944,0.00023258821,0.0002781226,0.000050027003,0.00013227346,0.000032620203,0.0004633063,0.00021859207,0.00002126092],"category_scores_gemma":[0.0011048435,0.00016846007,0.00015068865,0.00024768506,0.00014710026,0.0000034846898,0.0002593624,0.00027527064,0.000001126442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004363979,0.000017638555,0.00023446004,0.000023715163,0.000039649225,0.000007270252,0.00013050094,0.010643882,0.98630697,0.00026864727,0.00003438404,0.0022492465],"study_design_scores_gemma":[0.0019402723,0.0003658746,0.0032080163,0.00003986714,0.00012723356,0.000046415993,0.00062080676,0.053010993,0.8620905,0.0019804803,0.07583411,0.0007353836],"about_ca_topic_score_codex":0.00012257225,"about_ca_topic_score_gemma":0.000043724984,"teacher_disagreement_score":0.53232354,"about_ca_system_score_codex":0.00003224434,"about_ca_system_score_gemma":0.00005063217,"threshold_uncertainty_score":0.6869603},"labels":[],"label_agreement":null},{"id":"W3003559370","doi":"10.1007/978-1-0716-0278-2_19","title":"Probing RNA–Protein Interactions and RNA Compaction by Sedimentation Velocity Analytical Ultracentrifugation","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"National Institute of General Medical Sciences","keywords":"Ultracentrifuge; RNA; Analytical Ultracentrifugation; Biological system; Sedimentation; Chemical physics; Molecule; Chemistry; Biophysics; Materials science; Analytical Chemistry (journal); Chromatography; Biology; Biochemistry","score_opus":0.027225095947538518,"score_gpt":0.3653114200599515,"score_spread":0.33808632411241296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3003559370","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28530315,0.00027267198,0.7128985,0.0009670218,0.00006819527,0.00028193634,0.000007940898,0.000012886719,0.00018772278],"genre_scores_gemma":[0.7179965,0.000049660175,0.28091392,0.0007018166,0.000075071235,0.000059753198,0.0001406433,0.0000200386,0.000042598404],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816453,0.0008586383,0.00027475794,0.00043115302,0.00006264851,0.00020824948],"domain_scores_gemma":[0.99956864,0.00004047148,0.00011387655,0.00013962868,0.000040123145,0.00009726895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005050552,0.00015693533,0.00019395284,0.000054838045,0.000063218184,0.000022924401,0.00009825587,0.0001888638,0.000029823923],"category_scores_gemma":[0.00039888205,0.000159606,0.000057385132,0.00014853796,0.000072038674,0.000008172611,0.00005658007,0.0001623155,0.0000033642891],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086504035,0.000029388722,0.00015768695,0.000013307318,0.000033646094,0.0000016101558,0.0000659315,0.00003108824,0.96537536,0.0006763068,0.000050965336,0.033478223],"study_design_scores_gemma":[0.00039967813,0.00022201352,0.00007094054,0.000011778553,0.000017969274,0.0000057268458,0.00007212201,0.0017130272,0.9920754,0.0010364633,0.004208459,0.00016641774],"about_ca_topic_score_codex":0.000029412848,"about_ca_topic_score_gemma":0.0000028469235,"teacher_disagreement_score":0.43269333,"about_ca_system_score_codex":0.00002681713,"about_ca_system_score_gemma":0.000025633453,"threshold_uncertainty_score":0.6508544},"labels":[],"label_agreement":null},{"id":"W3004139101","doi":"10.1007/978-1-0716-0255-3_15","title":"Studying Xenograft Rejection of Bioprosthetic Heart Valves","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Cardiac Valve Diseases and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Winnipeg Regional Health Authority; St. Boniface Hospital; University of Manitoba","funders":"","keywords":"Glutaraldehyde; Medicine; Calcification; In vivo; Animal model; Pathology; Surgery; Cardiology; Urology; Internal medicine; Biology","score_opus":0.03963889191521767,"score_gpt":0.43531037757584673,"score_spread":0.39567148566062904,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3004139101","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.022665637,0.1005228,0.32985035,0.0030374452,0.003763102,0.00991882,0.00056942936,0.0005668732,0.52910554],"genre_scores_gemma":[0.035053957,0.001314189,0.9408954,0.0017665103,0.00029467192,0.00015150808,0.00066483405,0.0003197714,0.019539174],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9985391,0.00023958398,0.00042067174,0.00049972284,0.000115422365,0.00018553696],"domain_scores_gemma":[0.9991817,0.00008291812,0.00016183253,0.00040182102,0.00007218356,0.000099532466],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031460263,0.00028955258,0.0009730663,0.00026193494,0.00002045136,0.0000038736425,0.000065913206,0.00036517112,0.000085587715],"category_scores_gemma":[0.00014084044,0.00026008126,0.0012932351,0.00007366497,0.00014606652,0.0000067659585,0.000096980526,0.00029757535,0.000017410093],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0017848312,0.0009120777,0.08553993,0.0017274522,0.011847566,0.000879122,0.00045173982,0.000019277704,0.5893823,0.11974933,0.00025152153,0.18745483],"study_design_scores_gemma":[0.021449681,0.019393504,0.073915794,0.0048251497,0.025315346,0.00072862743,0.00039921782,0.00015441261,0.16319416,0.44129607,0.24474561,0.0045824386],"about_ca_topic_score_codex":0.00003247884,"about_ca_topic_score_gemma":5.528166e-7,"teacher_disagreement_score":0.61104506,"about_ca_system_score_codex":0.000068023626,"about_ca_system_score_gemma":0.00009114904,"threshold_uncertainty_score":0.99998516},"labels":[],"label_agreement":null},{"id":"W3008523177","doi":"10.1007/978-1-0716-0179-2_15","title":"Techniques for Small Non-Coding RNA Analysis in Seeds of Forest Tree Species","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Small RNA; Epigenetics; Gene; Computational biology; Adaptation (eye); Genetics; Evolutionary biology; DNA methylation; RNA; Gene expression","score_opus":0.0732608752846639,"score_gpt":0.3730959632916826,"score_spread":0.2998350880070187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3008523177","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56507146,0.00015895686,0.4321885,0.0012892692,0.000022865981,0.0004641531,0.000058830978,0.000024928007,0.0007210502],"genre_scores_gemma":[0.62911713,0.00006203099,0.37009993,0.0003970731,0.0000444539,0.00009088444,0.00016382139,0.0000021788794,0.0000225056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977773,0.000837107,0.00042228997,0.00047535682,0.00006786229,0.00042011376],"domain_scores_gemma":[0.9989461,0.0007106107,0.00011722078,0.00009210114,0.00006110878,0.00007288748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014191825,0.00017109052,0.0005979875,0.00015425183,0.000031170828,0.000010398843,0.0005196357,0.00029946287,0.00002897851],"category_scores_gemma":[0.0008225183,0.00008190438,0.00025125738,0.0015871022,0.00016772498,0.000016398924,0.00019686879,0.00021648142,9.109578e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000070289,0.000032274893,0.08610901,0.000011380039,0.00006952135,0.000015099,0.000040466766,0.000015819109,0.88867307,0.00068134075,0.0000055602954,0.024276152],"study_design_scores_gemma":[0.00023205759,0.00067417324,0.08058753,0.000013116123,0.000051782084,0.0000023458012,0.00009785277,0.001955131,0.9126449,0.002143374,0.0013717884,0.00022594571],"about_ca_topic_score_codex":0.00018518842,"about_ca_topic_score_gemma":0.0015917417,"teacher_disagreement_score":0.064045675,"about_ca_system_score_codex":0.000023651995,"about_ca_system_score_gemma":0.000013691337,"threshold_uncertainty_score":0.33399636},"labels":[],"label_agreement":null},{"id":"W3009226277","doi":"10.1007/978-1-0716-0327-7_11","title":"Improving MHC-I Ligand Identification by Incorporating Targeted Searches of Mass Spectrometry Data","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Beatrice Hunter Cancer Research Institute; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Proteome; Major histocompatibility complex; Computational biology; Mass spectrometry; Biology; Peptide; MHC class I; Computer science; Chemistry; Immune system; Bioinformatics; Biochemistry; Genetics","score_opus":0.043054342351651786,"score_gpt":0.350778372822678,"score_spread":0.3077240304710262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009226277","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1208879,0.002062007,0.876318,0.00025488582,0.00005560931,0.00019797646,0.000087064574,0.000009490683,0.00012710136],"genre_scores_gemma":[0.34673086,0.000074100586,0.6517185,0.00018965693,0.00004335865,0.000010594571,0.0011973063,0.000021796759,0.00001382305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820936,0.00041536026,0.0005819965,0.0004644161,0.000079676036,0.00024919258],"domain_scores_gemma":[0.9988352,0.000039227965,0.00031652427,0.0006849927,0.00006184902,0.000062223604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013924523,0.00017261528,0.0002913196,0.000080342244,0.000035645447,0.00002258866,0.0007021822,0.00021485472,0.00000516541],"category_scores_gemma":[0.0012304432,0.00016704347,0.00005931753,0.0003320272,0.00009256858,0.000011074638,0.0005509571,0.00018895464,0.0000016794918],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000361617,0.000024665815,0.0015462232,0.000069572685,0.000049563834,8.9674035e-7,0.000048067348,0.00002686394,0.98915803,0.00017334329,0.00011029692,0.008756282],"study_design_scores_gemma":[0.00037017564,0.0002222117,0.00016385797,0.000005607478,0.000015534228,0.0000029824866,0.00018862642,0.009252335,0.988578,0.00048370275,0.0005446432,0.00017228568],"about_ca_topic_score_codex":0.000036868314,"about_ca_topic_score_gemma":0.0000018373156,"teacher_disagreement_score":0.22584297,"about_ca_system_score_codex":0.000010739407,"about_ca_system_score_gemma":0.00006654416,"threshold_uncertainty_score":0.6811835},"labels":[],"label_agreement":null},{"id":"W3009436841","doi":"10.1007/978-1-0716-0327-7_2","title":"An Individualized Approach for Somatic Variant Discovery","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Genome; Germline mutation; Somatic cell; Computational biology; Reference genome; Germline; False positive paradox; Genomics; Personalized medicine; Cancer genome sequencing; Biology; Genetics; Mutation; Computer science; Gene; Artificial intelligence","score_opus":0.029800577820927807,"score_gpt":0.37465617244203075,"score_spread":0.34485559462110293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009436841","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03055774,0.00077461,0.96730864,0.00024435553,0.00012370391,0.00048145157,0.00010309046,0.000012454594,0.0003939272],"genre_scores_gemma":[0.06327619,0.00007779961,0.9327028,0.002843624,0.00020063034,0.00018965204,0.0006562101,0.000040121926,0.000013005019],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982103,0.0004954485,0.00031619717,0.00060427014,0.00004645781,0.00032729088],"domain_scores_gemma":[0.99927133,0.00008091013,0.000095460666,0.00039618195,0.000036491227,0.00011963531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006255604,0.00019740734,0.00031327055,0.000051829174,0.000039117724,0.000038532984,0.00036408973,0.0002566332,0.0000054181155],"category_scores_gemma":[0.0007499036,0.00019277849,0.00012787741,0.0001283748,0.000085258864,0.000003915541,0.00014583782,0.00010325061,8.22513e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013240831,0.00009696913,0.0006613548,0.000038075406,0.00005647853,0.000005166049,0.000101336605,0.00085399067,0.9868265,0.005312777,0.00008327182,0.005831708],"study_design_scores_gemma":[0.0037797885,0.0022341718,0.00033088066,0.000009274312,0.000100990925,0.00002617497,0.00023419996,0.016348833,0.93411034,0.0121436035,0.029833814,0.00084795104],"about_ca_topic_score_codex":0.000015498936,"about_ca_topic_score_gemma":0.000003988841,"teacher_disagreement_score":0.052716147,"about_ca_system_score_codex":0.000014281385,"about_ca_system_score_gemma":0.000100850666,"threshold_uncertainty_score":0.78612787},"labels":[],"label_agreement":null},{"id":"W3009535618","doi":"10.1007/978-1-0716-0327-7_12","title":"The SysteMHC Atlas: a Computational Pipeline, a Website, and a Data Repository for Immunopeptidomic Analyses","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Popularity; Pipeline (software); Computer science; Atlas (anatomy); Data science; World Wide Web; Biology; Operating system","score_opus":0.06438865556589658,"score_gpt":0.44335301408462396,"score_spread":0.3789643585187274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3009535618","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000008500203,0.0068236715,0.97304577,0.00021568085,0.000032042,0.00047527763,0.0003861806,0.00005664576,0.01895623],"genre_scores_gemma":[0.000079442434,0.0003994887,0.9873638,0.000117497264,0.00009986622,0.0003188123,0.0010269572,0.000056633387,0.010537479],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99838334,0.000097128446,0.000579733,0.00071423023,0.00005776579,0.00016779994],"domain_scores_gemma":[0.9977192,0.0008497259,0.00038164473,0.00093002437,0.00007678813,0.000042591102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048855,0.00026453246,0.00047554052,0.000054754375,0.00014699448,0.00003571864,0.00064661575,0.0003773201,0.000006240294],"category_scores_gemma":[0.00020636407,0.00021450534,0.00011180236,0.000033715103,0.00022637438,0.000016217473,0.00054397876,0.00039601186,0.0000013725773],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000105570245,0.000011694095,0.0000060920265,0.00022653746,0.00021352831,0.000017114533,0.000015064489,0.00009962202,0.8021943,0.18269865,0.0004538763,0.013957956],"study_design_scores_gemma":[0.0006662738,0.0000598134,4.960584e-7,0.00025523696,0.0002532482,0.00013221342,0.000027252912,0.027788643,0.05982731,0.47759777,0.43275964,0.00063210365],"about_ca_topic_score_codex":0.000013373102,"about_ca_topic_score_gemma":0.000003660621,"teacher_disagreement_score":0.74236697,"about_ca_system_score_codex":0.00005107034,"about_ca_system_score_gemma":0.00007974875,"threshold_uncertainty_score":0.87472737},"labels":[],"label_agreement":null},{"id":"W3013194239","doi":"10.1007/978-1-0716-0294-2_20","title":"In Vivo Tethering System to Isolate RNA-Binding Proteins Regulating mRNA Decay in Leishmania","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"Canadian Institutes of Health Research","keywords":"RNA-binding protein; Biology; Untranslated region; RNA; Three prime untranslated region; Messenger RNA; Cell biology; AU-rich element; Genetics; Gene","score_opus":0.02375007174142657,"score_gpt":0.3627310304962244,"score_spread":0.33898095875479783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013194239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7242561,0.00025499656,0.27364004,0.00046325327,0.000071016104,0.0005499144,0.000003846207,0.000014972499,0.00074589346],"genre_scores_gemma":[0.66757625,0.000017297172,0.33150086,0.0005013616,0.00009538973,0.00014483582,0.000006547103,0.000049910945,0.00010756148],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996607,0.0012619362,0.00054938445,0.00075954635,0.00010384494,0.0007182782],"domain_scores_gemma":[0.9992806,0.00005763353,0.00009227404,0.0003552258,0.000035906865,0.00017836572],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017940634,0.0002478327,0.00042757363,0.0002692446,0.00004402284,0.000026889342,0.00042618316,0.00031326833,0.000011793002],"category_scores_gemma":[0.000581498,0.0002536688,0.000086320106,0.000625765,0.000050134124,0.0000069276934,0.00041536012,0.00037337412,0.000006615817],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013043518,0.000018874662,0.004255031,0.00007089701,0.000015935031,0.00011427961,0.00018370742,0.001324423,0.9890185,0.0004687726,0.000007563495,0.0043916074],"study_design_scores_gemma":[0.00075379014,0.00035054595,0.00029081228,0.00011758921,0.0000026982368,0.00001547596,0.0002589938,0.0038868801,0.9927414,0.00005201788,0.0012390303,0.00029078577],"about_ca_topic_score_codex":0.00028240858,"about_ca_topic_score_gemma":0.00021094212,"teacher_disagreement_score":0.057860825,"about_ca_system_score_codex":0.00010705965,"about_ca_system_score_gemma":0.00007233366,"threshold_uncertainty_score":0.99999154},"labels":[],"label_agreement":null},{"id":"W3013546250","doi":"10.1007/978-1-0716-0520-2_6","title":"Stereolithography 3D Bioprinting","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":120,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Okanagan University College; Kelowna General Hospital; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Stereolithography; 3D bioprinting; Nanotechnology; Computer science; Materials science; Tissue engineering; Systems engineering; Biomedical engineering; Engineering","score_opus":0.038446932411020075,"score_gpt":0.4035795920334167,"score_spread":0.3651326596223966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013546250","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03612529,0.0004975647,0.9575111,0.00039746118,0.0001694585,0.00011734801,0.0000017480048,0.00021687342,0.004963147],"genre_scores_gemma":[0.06510404,0.000035698955,0.9343054,0.00044310835,0.000053421194,0.000020532885,0.0000033891047,0.0000303127,0.000004070274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840164,0.0005161647,0.0002742102,0.00028266886,0.0000897158,0.00043561394],"domain_scores_gemma":[0.9993613,0.0002376088,0.00001858183,0.00021656536,0.000020557874,0.00014541505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010614381,0.00013534883,0.00023156674,0.00018914268,0.000018805084,0.000014416525,0.00035437284,0.00018066514,0.00009333969],"category_scores_gemma":[0.0009872444,0.00013269631,0.00007102588,0.0007202024,0.00014999199,0.000015317986,0.0001969273,0.00046183172,0.000033030385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003887457,0.000006897694,0.00761261,0.00006239212,0.000028221191,0.000029365841,0.00010251694,0.00023487,0.82855356,0.0013922551,0.000017422351,0.161956],"study_design_scores_gemma":[0.0009787214,0.00021145381,0.0061251307,0.00006151531,0.000016788332,0.00001512753,0.00009268082,0.13186191,0.7809078,0.009920203,0.06899052,0.0008181226],"about_ca_topic_score_codex":0.000008158755,"about_ca_topic_score_gemma":5.397956e-7,"teacher_disagreement_score":0.16113786,"about_ca_system_score_codex":0.000018778557,"about_ca_system_score_gemma":0.000011171159,"threshold_uncertainty_score":0.5411198},"labels":[],"label_agreement":null},{"id":"W3013975168","doi":"10.1007/978-1-0716-0294-2_14","title":"Application of CRISPR/Cas9-Mediated Genome Editing in Leishmania","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"Fonds de Recherche du Québec - Santé; Canadian Institutes of Health Research","keywords":"CRISPR; Genome editing; Biology; Cas9; Guide RNA; Gene; Leishmania; Genome; Computational biology; Trans-activating crRNA; Genetics","score_opus":0.013140606123639799,"score_gpt":0.3898788883675957,"score_spread":0.3767382822439559,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3013975168","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10190239,0.0012680133,0.8961036,0.000211273,0.00006482828,0.00019679552,0.0000095525875,0.000009825768,0.0002336817],"genre_scores_gemma":[0.69873863,0.00006679593,0.30054006,0.00036544897,0.00010412942,0.00004140791,0.0001171089,0.000022787803,0.0000036128247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986692,0.00027271552,0.00036907734,0.00039421036,0.000047262016,0.0002475302],"domain_scores_gemma":[0.99954927,0.00003642028,0.000081752696,0.00023651241,0.00003612126,0.00005994665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049144094,0.00014342858,0.00025428756,0.00008992956,0.00001009023,0.0000033224092,0.00021829394,0.00022277144,0.0000076126657],"category_scores_gemma":[0.00050878734,0.00015751955,0.00006333064,0.00027869735,0.000058816127,0.0000014059386,0.00013403664,0.000151005,0.0000026186501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021255191,0.00002066092,0.0062582823,0.000030401938,0.000012982365,0.000004641017,0.00007851079,0.0018220902,0.98634493,0.00015679505,0.000005943974,0.0052434877],"study_design_scores_gemma":[0.00053283386,0.00019076483,0.0042247246,0.0000060391003,0.0000072437037,0.000004431265,0.00007744731,0.0041975663,0.9828163,0.00022658713,0.007529956,0.00018614868],"about_ca_topic_score_codex":0.000035787954,"about_ca_topic_score_gemma":0.00001741923,"teacher_disagreement_score":0.59683627,"about_ca_system_score_codex":0.000011264175,"about_ca_system_score_gemma":0.00002381395,"threshold_uncertainty_score":0.6423461},"labels":[],"label_agreement":null},{"id":"W3014033506","doi":"10.1007/978-1-0716-0294-2_33","title":"Isolation of Extracellular Vesicles from Leishmania spp.","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Microvesicles; Leishmania; Vesicle; Biology; Intracellular parasite; Cell biology; Microbiology; Secretion; Extracellular vesicle; Extracellular; Intracellular; Chemistry; Biochemistry; Parasite hosting; Membrane","score_opus":0.02194510421424952,"score_gpt":0.33640573803291157,"score_spread":0.31446063381866207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014033506","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35677755,0.0062775556,0.6361796,0.00019728986,0.000089849964,0.00016085505,0.000029434268,0.000013928007,0.00027391515],"genre_scores_gemma":[0.44243124,0.00006581329,0.5567593,0.0003860569,0.00011004263,0.000014276489,0.00017814219,0.000033654123,0.000021485104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973534,0.0010452146,0.00054513256,0.00065963453,0.00009636202,0.00030028675],"domain_scores_gemma":[0.99898845,0.00007226743,0.00020776821,0.00052854104,0.000063906904,0.0001390618],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005339581,0.0002365389,0.0003514281,0.00006541946,0.000025779476,0.000009762685,0.0004421475,0.00034486837,0.000099142606],"category_scores_gemma":[0.00075971504,0.0002558692,0.00017319611,0.00022098146,0.0002024246,0.000004636866,0.00024563703,0.00018430925,0.000014362202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014182513,0.00007144545,0.007901327,0.000020242709,0.00005617349,0.000027428756,0.00006579499,0.00016706783,0.9841428,0.0009529446,0.00007075448,0.0063822125],"study_design_scores_gemma":[0.0006574816,0.00025954234,0.0011827712,0.000010704746,0.000033175096,0.0000024172004,0.000062350904,0.0012677485,0.98722935,0.0044125314,0.0046196366,0.0002622956],"about_ca_topic_score_codex":0.00004136644,"about_ca_topic_score_gemma":0.0000059150407,"teacher_disagreement_score":0.08565367,"about_ca_system_score_codex":0.000012567277,"about_ca_system_score_gemma":0.000063204854,"threshold_uncertainty_score":0.99998933},"labels":[],"label_agreement":null},{"id":"W3014475542","doi":"10.1007/978-1-0716-0463-2_8","title":"Dextran-Functionalized Quantum Dot Immunoconjugates for Cellular Imaging","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Quantum Dots Synthesis And Properties","field":"Materials Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Dextran; Quantum dot; Biomolecule; Nanotechnology; Nanomaterials; Nanoparticle; Nanomedicine; Chemistry; Biocompatible material; Immunoconjugate; Materials science; Monoclonal antibody; Antibody; Biomedical engineering; Organic chemistry","score_opus":0.046851766317832694,"score_gpt":0.35695490959495185,"score_spread":0.3101031432771192,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3014475542","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.061825506,0.007392565,0.92753357,0.0021385015,0.00045908958,0.00033270742,0.00001821972,0.00006995969,0.0002298648],"genre_scores_gemma":[0.13312778,0.000056553727,0.8642172,0.0022080906,0.00010620022,0.00019388132,0.000018952313,0.000039869192,0.000031464275],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975589,0.0011090816,0.0004143933,0.0004694895,0.00006925772,0.00037886616],"domain_scores_gemma":[0.9990721,0.0004832529,0.000100078614,0.00022031729,0.000059031277,0.000065257715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017069954,0.00018885298,0.0003870939,0.000065689026,0.00008953822,0.000044524182,0.00032270598,0.00009879767,0.0006900976],"category_scores_gemma":[0.0009334053,0.00015218329,0.00013763594,0.00012540474,0.00018009754,0.00005787874,0.00008696066,0.0001093671,0.00004298089],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016758997,0.000018706633,0.00017913818,0.000034645578,0.000010377408,0.0000064738615,0.0001595467,0.000033313514,0.9746386,0.016843723,0.00004085384,0.007867075],"study_design_scores_gemma":[0.00047492952,0.000111534115,0.000020487796,0.000012275602,0.00001753659,0.000003886492,0.00007841063,0.0048721624,0.9304063,0.024159659,0.039633725,0.00020912479],"about_ca_topic_score_codex":0.000058302743,"about_ca_topic_score_gemma":0.0000011031941,"teacher_disagreement_score":0.07130228,"about_ca_system_score_codex":0.000020450145,"about_ca_system_score_gemma":0.000044785407,"threshold_uncertainty_score":0.7556085},"labels":[],"label_agreement":null},{"id":"W3017080548","doi":"10.1007/978-1-0716-0430-4_5","title":"Metazoan Soluble β-Galactoside-Binding Lectins, Galectins: Methods for Purification, Characterization of Their Carbohydrate-Binding Specificity, and Probing Their Ligands","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Galectins and Cancer Biology","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Galectin; Glycoconjugate; Galectin-3; Biochemistry; Binding selectivity; Lectin; Galactoside; Galactosides; Galectin-1; Carbohydrate; Biology; Carbohydrate-binding module; Glycan; Binding site; Chemistry; Glycoprotein; Computational biology; Cell biology; Glycoside hydrolase; Enzyme; Immunology","score_opus":0.0396032406052596,"score_gpt":0.3359241501559937,"score_spread":0.2963209095507341,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3017080548","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020566715,0.011083999,0.9535246,0.00058806594,0.0032046083,0.0030029123,0.00038229392,0.00018317398,0.0074636186],"genre_scores_gemma":[0.10462208,0.009003308,0.8273668,0.0011573932,0.0008149734,0.0018407968,0.010492212,0.0011549086,0.04354749],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950851,0.0013904842,0.0013538164,0.0014204335,0.00003609238,0.0007140341],"domain_scores_gemma":[0.9968967,0.00095750234,0.0012297652,0.0006048194,0.00024682478,0.00006440363],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0027890052,0.0008292984,0.001934049,0.00076706236,0.0002523589,0.000035729718,0.00054288126,0.001838554,0.00010644989],"category_scores_gemma":[0.0004404513,0.0007417273,0.00040435724,0.0002768604,0.00051803846,0.00006491114,0.00033549182,0.0011145364,0.000006290807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018549297,0.000038177193,0.00017747919,0.00016645425,0.0006418151,0.0000018357775,0.0007662327,7.2170127e-7,0.94153816,0.016324501,0.000014973417,0.040144134],"study_design_scores_gemma":[0.00088230823,0.0006151274,0.00005485829,0.00014896682,0.00020358515,0.000055097327,0.000097502954,0.00003581375,0.93441,0.015036427,0.047802497,0.000657861],"about_ca_topic_score_codex":0.00003037481,"about_ca_topic_score_gemma":0.000022882323,"teacher_disagreement_score":0.12615778,"about_ca_system_score_codex":0.00015410324,"about_ca_system_score_gemma":0.0002268729,"threshold_uncertainty_score":0.9995034},"labels":[],"label_agreement":null},{"id":"W3018986590","doi":"10.1007/978-1-0716-0648-3_10","title":"Nonsurgical Induction of Alopecia Areata in C3H/HeJ Mice via Adoptive Transfer of Cultured Lymphoid Cells","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Hair Growth and Disorders","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Alopecia areata; Adoptive cell transfer; Lymph node; Medicine; Stimulation; Immunology; T cell; Pathogenesis; Lymph; Pathology; Immune system; Internal medicine","score_opus":0.02631575757779638,"score_gpt":0.3411839672882444,"score_spread":0.31486820971044804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3018986590","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0044866013,0.0053374297,0.8371267,0.0004279404,0.0004896694,0.0016048393,0.0001686927,0.0000346056,0.15032357],"genre_scores_gemma":[0.03887604,0.0021631361,0.9514822,0.0014274201,0.00021918103,0.00008679241,0.00094128307,0.00021061582,0.0045933444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769723,0.00050742674,0.0008099814,0.0005846668,0.00014714187,0.00025351942],"domain_scores_gemma":[0.9991537,0.00015948829,0.00013610248,0.00032059767,0.000116513205,0.0001136021],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005284198,0.0003658141,0.0013348965,0.00041742736,0.00000936263,0.0000015064777,0.0001808743,0.0011779731,0.00016874741],"category_scores_gemma":[0.00018563478,0.00032610534,0.00030310272,0.00019661766,0.0003477364,0.000015122693,0.00005941737,0.00061941094,0.0000064285846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010894913,0.00016536459,0.00035227172,0.00030955058,0.00022393357,0.00021937334,0.00062428426,0.000015776328,0.9641267,0.0104740625,0.00003271829,0.022366446],"study_design_scores_gemma":[0.008758712,0.0019723445,0.000339444,0.0007960558,0.0006002734,0.00016167085,0.00029531782,0.00012429111,0.92009807,0.01896233,0.046927586,0.0009639153],"about_ca_topic_score_codex":0.00010349042,"about_ca_topic_score_gemma":0.000039222396,"teacher_disagreement_score":0.14573023,"about_ca_system_score_codex":0.00007656344,"about_ca_system_score_gemma":0.00017392951,"threshold_uncertainty_score":0.9999191},"labels":[],"label_agreement":null},{"id":"W3020939423","doi":"10.1007/978-1-4939-6581-6_12","title":"Measuring Phagosomal pH by Fluorescence Microscopy","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; St. Michael's Hospital; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Photobleaching; Microscopy; Fluorescence; Fluorescence microscope; Instrumentation (computer programming); Fluorescence-lifetime imaging microscopy; Population; Calibration; Materials science; Nanotechnology; Biophysics; Chemistry; Optics; Computer science; Physics; Biology; Medicine","score_opus":0.020773903258204728,"score_gpt":0.34781132998117414,"score_spread":0.3270374267229694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3020939423","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15850046,0.0017663809,0.8388525,0.0001334004,0.00030907776,0.00013982615,0.000014850946,0.000015936015,0.0002675204],"genre_scores_gemma":[0.17187205,0.0004701273,0.82676667,0.00034695494,0.000121842255,0.00005718178,0.00003260949,0.000051212603,0.00028134816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99773055,0.00075596204,0.00031438013,0.0006367856,0.00007739842,0.00048493425],"domain_scores_gemma":[0.9993099,0.000049373244,0.00008845022,0.00040857235,0.000052373438,0.000091333124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094240386,0.00022996393,0.0002574308,0.00007603407,0.000049440845,0.000013360211,0.0003682537,0.00032435387,0.0001042704],"category_scores_gemma":[0.00036625972,0.00017324594,0.00011759288,0.00011430496,0.00013647377,0.0000034700365,0.00017430006,0.000110398694,0.000012176368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004575472,0.000031617157,0.0008755739,0.000005189791,0.000024701882,0.0000055678915,0.000010230747,0.0000018352472,0.9687176,0.0006103486,0.00013213546,0.029539457],"study_design_scores_gemma":[0.0006221061,0.00019962952,0.000026106109,0.000024753359,0.000006440883,0.000012918346,0.0000100338475,0.000011319407,0.98434734,0.0020892534,0.012391402,0.00025868294],"about_ca_topic_score_codex":0.00001734061,"about_ca_topic_score_gemma":0.0000025843121,"teacher_disagreement_score":0.029280774,"about_ca_system_score_codex":0.0000275015,"about_ca_system_score_gemma":0.000044924418,"threshold_uncertainty_score":0.70647645},"labels":[],"label_agreement":null},{"id":"W3021044334","doi":"10.1007/978-1-0716-0581-3_15","title":"A Porcine Model of Zika Virus Infection to Profile the In Utero Interferon Alpha Response","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"In utero; Zika virus; Fetus; Subclinical infection; Offspring; Immunology; Alpha interferon; Interferon; Biology; Placenta; Hysterotomy; Medicine; Pregnancy; Virus; Virology","score_opus":0.06006220466499738,"score_gpt":0.4404317655688372,"score_spread":0.3803695609038398,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021044334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5931748,0.00015575704,0.40325296,0.0029863308,0.00003497073,0.00029351926,0.00000715789,0.000011647725,0.00008286665],"genre_scores_gemma":[0.86240757,0.00002381662,0.12997988,0.0074288803,0.000019227982,0.000083884814,0.000010036377,0.000012783931,0.00003393242],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975307,0.0017092351,0.0002895614,0.00025434585,0.000041346535,0.00017481],"domain_scores_gemma":[0.9994806,0.0001504713,0.00005335131,0.00022146283,0.000026967562,0.00006715668],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009956568,0.000110345114,0.00032408914,0.00015612398,0.00001289518,0.0000014703525,0.000098053904,0.00015138666,0.000049096903],"category_scores_gemma":[0.0016847746,0.00007846515,0.00006834044,0.00030750033,0.000099492885,0.000014404205,0.00010675366,0.00024114511,0.000007506753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007274615,0.00009645892,0.008659135,0.000027257347,0.00002190125,0.000043519405,0.00036325562,0.000570852,0.9767444,0.00026470853,0.000061272265,0.0058726254],"study_design_scores_gemma":[0.002412269,0.005486574,0.049197536,0.00007542057,0.000083642364,0.00002485947,0.00006110459,0.03322428,0.9052008,0.0032162298,0.0008168182,0.00020048743],"about_ca_topic_score_codex":0.0000823102,"about_ca_topic_score_gemma":0.000021619351,"teacher_disagreement_score":0.27327308,"about_ca_system_score_codex":0.000026490094,"about_ca_system_score_gemma":0.000055486667,"threshold_uncertainty_score":0.3199716},"labels":[],"label_agreement":null},{"id":"W3021808561","doi":"10.1007/978-1-62703-535-4_20","title":"Quantitative Analysis of MicroRNA in Blood Serum with Protein-Facilitated Affinity Capillary Electrophoresis","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"microRNA; Capillary electrophoresis; RNA; Molecular biology; DNA; Electrophoretic mobility shift assay; RNA-binding protein; Chemistry; Gene; Biology; Biochemistry; Gene expression","score_opus":0.011455790425526264,"score_gpt":0.3235872569396906,"score_spread":0.31213146651416435,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021808561","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8869987,0.0015645603,0.11066895,0.00006421902,0.000013725025,0.0005784411,0.000030520983,0.0000075757544,0.00007326751],"genre_scores_gemma":[0.6438815,0.000049166676,0.35571453,0.00004955583,0.000004398195,0.00011483686,0.00014963979,0.000018299828,0.000018102504],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99683475,0.0016235781,0.00048773809,0.00058698206,0.000083855106,0.00038307457],"domain_scores_gemma":[0.99895847,0.000064755564,0.00020908084,0.0005138184,0.00018799436,0.00006589575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068272854,0.00024431464,0.00051732245,0.00054501084,0.000021433301,0.000008459065,0.00024840896,0.00029508455,0.000061926534],"category_scores_gemma":[0.00040297385,0.00021938252,0.00015727738,0.001299391,0.00023183362,0.0000048839343,0.00010467129,0.0001562246,0.000002400194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017721637,0.0001576638,0.03290427,0.000027654612,0.000765292,0.0000103756465,0.000055708704,0.0005389084,0.9646564,0.00023702269,0.000004531313,0.0004649206],"study_design_scores_gemma":[0.0006729107,0.00060676725,0.06751431,0.000016478873,0.0002106518,0.0000036170673,0.00005521175,0.00039794386,0.9296038,0.00063357997,0.000041912615,0.00024279006],"about_ca_topic_score_codex":0.00061851344,"about_ca_topic_score_gemma":0.00046964115,"teacher_disagreement_score":0.24504557,"about_ca_system_score_codex":0.00003111407,"about_ca_system_score_gemma":0.00010752473,"threshold_uncertainty_score":0.89461595},"labels":[],"label_agreement":null},{"id":"W3021830119","doi":"10.1007/978-1-0716-0581-3_2","title":"Zika Virus Isolation, Purification, and Titration","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Zika virus; Microcephaly; Virology; Isolation (microbiology); Virus; Pathogen; Medicine; Biology; Dengue fever; Dengue virus; Immunology; Bioinformatics; Pediatrics","score_opus":0.02403071638065935,"score_gpt":0.36855921108644346,"score_spread":0.3445284947057841,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3021830119","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000056432542,0.012267146,0.90596133,0.002480289,0.00016234799,0.00072668307,0.000035031288,0.00004671297,0.078264],"genre_scores_gemma":[0.0033913997,0.002009575,0.94450665,0.0096385805,0.0006230834,0.0001665096,0.0011751477,0.00016417586,0.038324866],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987006,0.00018831508,0.00038753139,0.00050745485,0.00007621749,0.00013986825],"domain_scores_gemma":[0.99922913,0.000077973345,0.00015509325,0.00033275317,0.000093740615,0.00011128499],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032377985,0.00022512767,0.0005021217,0.00014228674,0.000027668848,0.000012196898,0.00007803263,0.00043772184,0.00023038105],"category_scores_gemma":[0.00026080068,0.00021428558,0.0001453965,0.000043747812,0.0000964234,0.000014339542,0.00004095563,0.00030150983,0.000022103623],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023286302,0.000035814395,0.00032489965,0.00012794306,0.00024334424,0.0000836378,0.000063507905,0.0000022620795,0.36410168,0.53085464,0.00033269447,0.10359672],"study_design_scores_gemma":[0.0028809705,0.0009719974,0.0018469584,0.00020618804,0.0012425072,0.00007666055,0.000021139138,0.0024458792,0.010133472,0.2983813,0.6808926,0.0009003641],"about_ca_topic_score_codex":0.000012987404,"about_ca_topic_score_gemma":0.0000059105146,"teacher_disagreement_score":0.6805599,"about_ca_system_score_codex":0.00003564502,"about_ca_system_score_gemma":0.000098065706,"threshold_uncertainty_score":0.8738313},"labels":[],"label_agreement":null},{"id":"W3022149026","doi":"10.1007/978-1-0716-0581-3_19","title":"Use of Primary Human Fetal Astrocytes and Tissue Explants as Ex Vivo Models to Study Zika Virus Infection of the Developing Brain","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Women and Children’s Health Research Institute; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Microcephaly; Ex vivo; Biology; Virology; Brain tissue; Fetus; In vivo; Immunology; Virus; Neuroscience; Pathology; Medicine; Pregnancy; Genetics","score_opus":0.0795743461252009,"score_gpt":0.40749936867603703,"score_spread":0.3279250225508361,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022149026","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67230785,0.000216188,0.3266776,0.00023202441,0.000029573832,0.00049323286,0.0000068614904,0.0000069266234,0.000029735458],"genre_scores_gemma":[0.8691598,0.000016317877,0.12893805,0.0017970034,0.000027099539,0.00003373727,0.0000047689405,0.000013529856,0.000009646937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983978,0.0008107446,0.00030554543,0.00026241655,0.00008329023,0.00014014675],"domain_scores_gemma":[0.99945736,0.00013149588,0.00009734237,0.00020110961,0.000044828656,0.000067872024],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036318056,0.000117912714,0.00041955514,0.000073765055,0.000025748812,0.000004723736,0.0000824536,0.000073954056,0.000011357228],"category_scores_gemma":[0.00039575138,0.0000891242,0.00006445865,0.00018553626,0.000053643646,0.000024798093,0.00017009386,0.00010239573,3.519004e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022618697,0.000101134436,0.019078655,0.00005033833,0.000096472126,0.000015010019,0.00061659486,0.00009806838,0.9554079,0.00041669115,0.000005899045,0.02388701],"study_design_scores_gemma":[0.0023090006,0.0023592776,0.08051519,0.00009137446,0.00020918583,0.000018116343,0.00022506983,0.00081467925,0.911711,0.0010853634,0.00046603355,0.00019570884],"about_ca_topic_score_codex":0.000495322,"about_ca_topic_score_gemma":0.000038017675,"teacher_disagreement_score":0.19773954,"about_ca_system_score_codex":0.00002043259,"about_ca_system_score_gemma":0.000053682023,"threshold_uncertainty_score":0.36343795},"labels":[],"label_agreement":null},{"id":"W3022462210","doi":"10.1007/978-1-0716-0581-3_3","title":"Evaluating Zika Virus Pathogenesis in Immunocompromised Mice","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Zika virus; Pathogenesis; Virology; Viral infection; Virus; Biology; Immunology; Medicine","score_opus":0.05818115453898362,"score_gpt":0.4342210110507854,"score_spread":0.37603985651180183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022462210","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010478522,0.19336098,0.54825836,0.0033661642,0.0019430026,0.010181743,0.00042058397,0.00035340196,0.23163722],"genre_scores_gemma":[0.0016175801,0.00092430634,0.97850156,0.0060507623,0.00036966187,0.00044282622,0.00045994684,0.0002765959,0.011356759],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965569,0.0009859799,0.0008695535,0.000982068,0.00018224785,0.00042324755],"domain_scores_gemma":[0.9984969,0.0003069842,0.00028513456,0.0006602711,0.000094550895,0.00015615158],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013964338,0.00049959234,0.0014376466,0.0003395463,0.0000278126,0.000011607495,0.000299455,0.00075126,0.00044722014],"category_scores_gemma":[0.0007475319,0.000484076,0.0005660618,0.00011526264,0.00011325912,0.000011082537,0.00020589026,0.00075844006,0.0000404862],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00055386464,0.000048675596,0.0000765253,0.00011922897,0.00019099003,0.00061425916,0.00003834988,0.00001133603,0.7738148,0.0075104893,0.000007851242,0.21701361],"study_design_scores_gemma":[0.06764383,0.011939707,0.006861825,0.0056869965,0.009865397,0.00058829616,0.00029236768,0.030083826,0.21173978,0.3138443,0.33198315,0.009470546],"about_ca_topic_score_codex":0.00008916301,"about_ca_topic_score_gemma":0.000014424784,"teacher_disagreement_score":0.5620751,"about_ca_system_score_codex":0.00015089665,"about_ca_system_score_gemma":0.00028559033,"threshold_uncertainty_score":0.9997611},"labels":[],"label_agreement":null},{"id":"W3022787501","doi":"10.1007/978-1-0716-0581-3_4","title":"Droplet Digital PCR and Immunohistochemistry Techniques to Detect Zika Virus in the Central Nervous System of Mice","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Zika virus; Immunohistochemistry; Central nervous system; Virology; Biology; Virus; Viral load; Pathology; Immunology; Medicine; Neuroscience","score_opus":0.01170910127798712,"score_gpt":0.3430986952033887,"score_spread":0.33138959392540157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022787501","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61139274,0.0044473954,0.38103545,0.0014622693,0.000045288663,0.0008090206,0.000044767374,0.000043135904,0.00071995315],"genre_scores_gemma":[0.91416645,0.000017331464,0.08416668,0.0015083624,0.00003831249,0.00007333134,0.000012202612,0.000013074148,0.000004235209],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99879885,0.00034223375,0.00029499442,0.0002706708,0.00006478707,0.00022847703],"domain_scores_gemma":[0.9994833,0.00010662103,0.00006108872,0.0002385903,0.000025690155,0.00008472128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033484143,0.00012748796,0.00038004894,0.000050199844,0.000012487777,0.00000980951,0.00017219553,0.00011694951,0.000004693097],"category_scores_gemma":[0.00044329753,0.00009451736,0.00009964481,0.00019861964,0.00007338883,0.000010564399,0.00007894115,0.00016391154,5.9514144e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026760026,0.000024713696,0.0008741286,0.00013176617,0.00002546923,0.00011442198,0.0001904459,0.0000012951508,0.94243026,0.00020421467,0.000015285032,0.055720374],"study_design_scores_gemma":[0.0014742562,0.0011101983,0.0053706127,0.00018030163,0.00014654726,0.00015120885,0.0009510055,0.0004566596,0.9857574,0.00035792185,0.0037559387,0.00028795816],"about_ca_topic_score_codex":0.000112085756,"about_ca_topic_score_gemma":0.0000018409678,"teacher_disagreement_score":0.30277374,"about_ca_system_score_codex":0.000038240116,"about_ca_system_score_gemma":0.00004031813,"threshold_uncertainty_score":0.3854306},"labels":[],"label_agreement":null},{"id":"W3022869297","doi":"10.1007/978-1-0716-0581-3_5","title":"A Plaque Reduction Neutralization Test for the Detection of ZIKV-Specific Antibodies","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Plaque reduction neutralization test; Neutralization; Virology; Vero cell; Zika virus; Antibody; Serial dilution; Serology; Neutralizing antibody; Virus; Biology; Medicine; Immunology; Pathology","score_opus":0.03402942347544752,"score_gpt":0.3685492280602166,"score_spread":0.3345198045847691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3022869297","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000042746728,0.011947057,0.981819,0.00097005646,0.0004549173,0.0012622972,0.000055682605,0.000028284085,0.0034199723],"genre_scores_gemma":[0.118123814,0.022569967,0.8251334,0.0028959918,0.0038090015,0.0013872617,0.0017610727,0.00063564273,0.023683865],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988104,0.0001423893,0.00042623328,0.0003988862,0.00007192804,0.0001501484],"domain_scores_gemma":[0.9988998,0.00032783594,0.00025662515,0.00033470453,0.00013784802,0.00004318053],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037389112,0.00021979681,0.00053419836,0.00014979782,0.00004141614,0.000006542877,0.000105715306,0.00037630825,0.000032709286],"category_scores_gemma":[0.00031340605,0.00016643877,0.0003517804,0.00006623659,0.00015390305,0.000010550121,0.00003422382,0.00024775226,0.0000017552786],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00043759792,0.000030649404,0.00003124688,0.00016602223,0.00018060992,0.000008596959,0.000041903393,0.000019417212,0.82903975,0.0642565,0.00005932566,0.10572836],"study_design_scores_gemma":[0.0045282114,0.0035787553,0.0007047338,0.0005488934,0.002420813,0.00014736516,0.00015583572,0.004032246,0.38087654,0.106440224,0.49571568,0.0008507095],"about_ca_topic_score_codex":0.0000132029745,"about_ca_topic_score_gemma":0.0000043395517,"teacher_disagreement_score":0.49565634,"about_ca_system_score_codex":0.000044153683,"about_ca_system_score_gemma":0.000055606943,"threshold_uncertainty_score":0.67871755},"labels":[],"label_agreement":null},{"id":"W3023213195","doi":"10.1007/978-1-4939-3774-5_10","title":"DNA Barcoding of Marine Metazoans","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Government of Canada; Ontario Genomics Institute; Genome Canada","keywords":"DNA barcoding; Phylum; Biology; Barcode; Evolutionary biology; Identification (biology); DNA sequencing; Computational biology; DNA; Paleontology; Ecology; Computer science; Genetics","score_opus":0.03604365331397369,"score_gpt":0.39063851491753315,"score_spread":0.35459486160355946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3023213195","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10389333,0.00019292506,0.8926093,0.00043178792,0.00027117043,0.00012643552,0.000011558538,0.000009837093,0.0024536385],"genre_scores_gemma":[0.51477295,0.00015899194,0.48341426,0.00019780415,0.00004268491,0.000046734604,0.000050986146,0.000023998617,0.0012916033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834263,0.0006454657,0.00038742356,0.0003725931,0.000053506064,0.00019836385],"domain_scores_gemma":[0.99915355,0.000054994784,0.00013870429,0.0005187516,0.00009366792,0.000040309045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001044355,0.00011894325,0.00019532713,0.00013958054,0.000021834203,0.0000044138847,0.00026840623,0.00016931615,0.00013293349],"category_scores_gemma":[0.00071010983,0.00009069951,0.00010227503,0.00016723896,0.00018279103,0.000002147838,0.00015158019,0.000050314087,0.000011132727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019995197,0.00003543144,0.0029711723,0.0000072978246,0.000031866868,6.2550134e-7,0.0000093112985,0.0000011787482,0.95374763,0.019144382,0.00005908213,0.023972046],"study_design_scores_gemma":[0.0003837301,0.00007753713,0.0016604089,0.000007312612,0.000010002508,0.0000054711486,0.000012992273,0.0000076455935,0.9706967,0.0024902718,0.02452595,0.00012201249],"about_ca_topic_score_codex":0.000008282725,"about_ca_topic_score_gemma":0.000007714368,"teacher_disagreement_score":0.41087958,"about_ca_system_score_codex":0.000010378759,"about_ca_system_score_gemma":0.000034310557,"threshold_uncertainty_score":0.36986187},"labels":[],"label_agreement":null},{"id":"W30241777","doi":"10.1007/978-1-59745-204-5_25","title":"Oral Mucosal Cell Response to Candida albicans in Transgenic Mice Expressing HIV-1","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Clinical Research Institute; Université de Montréal","funders":"","keywords":"Candida albicans; Immune system; Genetically modified mouse; Immunology; Transgene; Human immunodeficiency virus (HIV); Biology; Immunity; Immunodeficiency; Phenotype; Virology; Microbiology; Gene","score_opus":0.03606054961950395,"score_gpt":0.40405981263570223,"score_spread":0.3679992630161983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W30241777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67148095,0.00041313763,0.32675895,0.0005312878,0.000075061056,0.00024801804,0.0000066821644,0.00001647671,0.00046940148],"genre_scores_gemma":[0.5844353,0.000024180794,0.4142866,0.00080255495,0.00001717735,0.00002195745,0.000007938673,0.000016331858,0.0003879422],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99611026,0.002387154,0.0004096604,0.0005210002,0.00010148718,0.0004704222],"domain_scores_gemma":[0.9989896,0.00038106617,0.00004189696,0.0004002216,0.000039827486,0.00014739708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019265082,0.00018553314,0.00051629654,0.00027794682,0.000042959087,0.0000036633137,0.0001552687,0.00023351655,0.00009276502],"category_scores_gemma":[0.00085638417,0.00017019307,0.000119032666,0.00046349873,0.0001903446,0.000021168637,0.000044213342,0.00037143155,0.000014314562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.002718223,0.00012096882,0.07639299,0.000025215397,0.000008026853,0.00030238277,0.00096816436,0.000018942354,0.91725796,0.00001684578,0.00005380473,0.0021164757],"study_design_scores_gemma":[0.0038938124,0.00078669615,0.21539646,0.000101213394,0.00004014523,0.00007994939,0.0004926168,0.00018909531,0.76940006,0.00041350088,0.0087590385,0.00044741278],"about_ca_topic_score_codex":0.00030013538,"about_ca_topic_score_gemma":0.00028543785,"teacher_disagreement_score":0.1478579,"about_ca_system_score_codex":0.000141714,"about_ca_system_score_gemma":0.0002460332,"threshold_uncertainty_score":0.6940272},"labels":[],"label_agreement":null},{"id":"W3024968315","doi":"10.1007/978-1-4939-9167-9_9","title":"Depletion and Reconstitution of Macrophages in Mice","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Inflammation; Chemokine; Immune system; Innate immune system; Macrophage; Cell biology; Cytokine; Immunology; In vivo; Proinflammatory cytokine; Acquired immune system; Biology; Chemistry; In vitro; Biochemistry","score_opus":0.011316788373797683,"score_gpt":0.34141629453778555,"score_spread":0.33009950616398787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3024968315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8977632,0.01391988,0.085352294,0.00007105558,0.0009475648,0.00025745135,0.0000044780795,0.000010472005,0.001673624],"genre_scores_gemma":[0.83382034,0.0003466057,0.16544986,0.00012938553,0.0000036689328,0.000018984423,0.000021514208,0.000009399416,0.00020026857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998064,0.0011962387,0.00028467653,0.00025369122,0.000008126387,0.00019327263],"domain_scores_gemma":[0.99950045,0.0002131169,0.00008863577,0.00017257087,0.000020627287,0.0000046200344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009537615,0.00009645171,0.00028160372,0.00019543272,0.000010805972,0.0000014241365,0.00010947789,0.00031030993,0.00016568555],"category_scores_gemma":[0.00016691234,0.000094079944,0.000031208554,0.00014657211,0.00027298316,0.000019572934,0.00007960736,0.0002274118,0.000026581674],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006127164,0.000023416675,0.024991473,0.00002453201,0.000016718534,0.0000026531695,0.00008169684,0.000016004788,0.95260096,0.0035997492,0.00000488927,0.018576609],"study_design_scores_gemma":[0.0010206248,0.000111800415,0.0063006175,0.000035987694,0.0000069505904,0.000034457364,0.000055931145,0.000011963174,0.9863403,0.002711754,0.0032634514,0.00010615042],"about_ca_topic_score_codex":0.00016656179,"about_ca_topic_score_gemma":0.000019553074,"teacher_disagreement_score":0.080097556,"about_ca_system_score_codex":0.000035751495,"about_ca_system_score_gemma":0.000029376895,"threshold_uncertainty_score":0.38364688},"labels":[],"label_agreement":null},{"id":"W3027544472","doi":"10.1007/978-1-60327-310-7_21","title":"Liquid Chromatography MALDI MS/MS for Membrane Proteome Analysis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Chromatography; Chemistry; Mass spectrometry; MALDI imaging; Tandem mass spectrometry; Matrix-assisted laser desorption/ionization; Elution; Proteome; Sample preparation in mass spectrometry; Protein mass spectrometry; Sample preparation; Electrospray ionization; Desorption; Biochemistry; Organic chemistry; Adsorption","score_opus":0.015239230608733494,"score_gpt":0.3761646740925282,"score_spread":0.3609254434837947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3027544472","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02941251,0.00024366115,0.95721644,0.0006320283,0.000012859511,0.00034457693,0.000032043048,0.00015908564,0.011946782],"genre_scores_gemma":[0.105970435,0.00004122172,0.8928899,0.0002791185,0.000038758484,0.0005613551,0.00011127862,0.000017112474,0.000090799826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998514,0.00014493382,0.0003776552,0.0005187316,0.00006229361,0.00038237066],"domain_scores_gemma":[0.99900126,0.00011403327,0.00013160624,0.0006395213,0.00004567807,0.00006788102],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000658106,0.00020121221,0.00046854498,0.00046396957,0.00005453315,0.000014685939,0.00038023412,0.00030241252,0.0010008991],"category_scores_gemma":[0.00012510839,0.00019215627,0.00038815386,0.001377138,0.000074098934,0.000016007541,0.00004545618,0.00019843582,0.0000013535474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003355306,0.0000925448,0.0003084235,0.00002497193,0.00013829024,0.0000031894292,0.000009735353,0.000013413186,0.9622399,0.034296487,0.000014039196,0.0028254555],"study_design_scores_gemma":[0.00023492206,0.00018186915,0.00013418487,0.0000064421993,0.00014305778,0.00000409285,0.00000507292,0.00047512574,0.9474877,0.037910298,0.01319526,0.00022198525],"about_ca_topic_score_codex":0.000034009685,"about_ca_topic_score_gemma":0.0000049333366,"teacher_disagreement_score":0.07655793,"about_ca_system_score_codex":0.000035862657,"about_ca_system_score_gemma":0.000016559083,"threshold_uncertainty_score":0.9999123},"labels":[],"label_agreement":null},{"id":"W3029144676","doi":"10.1007/978-1-0716-0528-8_26","title":"Cystatin Activity–Based Protease Profiling to Select Protease Inhibitors Useful in Plant Protection","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Cystatin; Proteases; Protease; Biotinylation; Biochemistry; Biology; Computational biology; Chemistry; Cystatin C; Enzyme","score_opus":0.026785739700701937,"score_gpt":0.3444890760993742,"score_spread":0.31770333639867226,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029144676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5427424,0.00010692784,0.4547477,0.0005688199,0.000058152367,0.0016925144,0.000022410404,0.000017793416,0.000043327895],"genre_scores_gemma":[0.56087273,0.000006047554,0.4365726,0.0013068127,0.00011578139,0.0009943433,0.00007221736,0.000044941822,0.000014494049],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99661833,0.001497376,0.0004022924,0.00083604944,0.00011550492,0.0005304568],"domain_scores_gemma":[0.99926466,0.000026299393,0.00012638619,0.00034211233,0.00007085658,0.00016966062],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008635241,0.00030536467,0.00034314228,0.00019883712,0.000049413462,0.000020070514,0.000241652,0.00036266475,0.0000071576214],"category_scores_gemma":[0.0011347443,0.0003085314,0.000101184705,0.00060597743,0.000066660265,0.000003995716,0.00012528844,0.00037925047,0.0000062466],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009290816,0.00010667871,0.004918212,0.000093194205,0.0000160684,0.000048963047,0.00008533202,0.0014985652,0.9866661,0.000027400503,0.000019047822,0.0055913944],"study_design_scores_gemma":[0.00089371746,0.0011965164,0.00061918993,0.000036772934,0.000008026431,0.0000058722912,0.00002917705,0.0017921986,0.9921423,0.00016720172,0.0027451038,0.0003639188],"about_ca_topic_score_codex":0.000092931725,"about_ca_topic_score_gemma":0.00010260708,"teacher_disagreement_score":0.0181751,"about_ca_system_score_codex":0.00005842967,"about_ca_system_score_gemma":0.00026295646,"threshold_uncertainty_score":0.9999367},"labels":[],"label_agreement":null},{"id":"W3029160797","doi":"10.1007/978-1-0716-0635-3_7","title":"A Procedure for Analyzing the Proteomic Proteomics Profile of Schistosoma mansoni Cercariae","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Parasites and Host Interactions","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Proteomics; Biology; Schistosoma mansoni; Biomphalaria glabrata; Shotgun proteomics; Proteome; Biomphalaria; Schistosomiasis; Immunology; Bioinformatics; Helminths; Biochemistry","score_opus":0.026801906431047313,"score_gpt":0.36619878746310275,"score_spread":0.33939688103205545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029160797","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014101797,0.0117497025,0.9261701,0.0021947653,0.001326017,0.008807295,0.0008811088,0.00010191872,0.047358923],"genre_scores_gemma":[0.0016874421,0.00025440342,0.9244579,0.0004925665,0.0001447942,0.0019352278,0.0008698318,0.00018588989,0.06997196],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782205,0.00046499397,0.0006986073,0.0006391692,0.000022237642,0.00035293377],"domain_scores_gemma":[0.9984717,0.00031847518,0.0005693454,0.0004922329,0.00012649325,0.000021756425],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005853624,0.00040039312,0.00087042974,0.0002376928,0.00012281312,0.00000928616,0.00053192495,0.0010374436,0.00022745605],"category_scores_gemma":[0.00046540273,0.00030688837,0.00041768813,0.00007783784,0.00040865215,0.000019308838,0.00017407707,0.0010507399,0.000042380205],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002816647,0.000030126495,0.000108877444,0.0001316137,0.00047271283,0.0000040431587,0.00013899879,0.0000050671806,0.892463,0.10236642,0.00030626333,0.0036912158],"study_design_scores_gemma":[0.0014116653,0.0009687248,0.000084700376,0.00032498033,0.00048479682,0.00013471271,0.000041825548,0.000066050925,0.7154332,0.07201386,0.2083169,0.00071857614],"about_ca_topic_score_codex":0.000037053615,"about_ca_topic_score_gemma":0.000018421924,"teacher_disagreement_score":0.20801064,"about_ca_system_score_codex":0.00008267056,"about_ca_system_score_gemma":0.00023336752,"threshold_uncertainty_score":0.9999383},"labels":[],"label_agreement":null},{"id":"W3029960559","doi":"10.1007/978-1-0716-0635-3_13","title":"Characterization of Schistosoma mansoni Dihydrofolate Reductase (DHFR)","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biochemical and Molecular Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada Research Chairs","funders":"","keywords":"Dihydrofolate reductase; Schistosoma mansoni; Thymidylate synthase; Enzyme; Biochemistry; Isothermal titration calorimetry; Biology; Chemistry; Molecular biology; Genetics; Schistosomiasis","score_opus":0.02341819804096439,"score_gpt":0.37582756179246163,"score_spread":0.35240936375149723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3029960559","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6107886,0.00064712984,0.38716292,0.00076410547,0.00006517817,0.00021211106,0.000027168995,0.000010742461,0.0003220683],"genre_scores_gemma":[0.76247567,0.0003111571,0.23468554,0.0015742783,0.00013351938,0.000054980577,0.00060998223,0.00005734109,0.00009750856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786866,0.0007175752,0.00039027174,0.00057478686,0.000098652345,0.0003500757],"domain_scores_gemma":[0.9992692,0.0000150757305,0.00011763378,0.00037138708,0.00007679306,0.00014994328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003945347,0.00019959545,0.00031072873,0.00008337824,0.000027058713,0.0000073909105,0.0003639702,0.00033212133,0.0000312303],"category_scores_gemma":[0.0004746009,0.00019578432,0.00014032569,0.00030486472,0.00022079959,0.0000026904177,0.0002850906,0.00022415143,0.00000548559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016299651,0.000057108307,0.0006456422,0.000042371925,0.000039413517,0.000016291078,0.000040562045,0.000005288805,0.99232346,0.000634537,0.000020235424,0.0060121226],"study_design_scores_gemma":[0.0005050118,0.00035637422,0.00022320199,0.000010987017,0.000011569018,0.00000967079,0.000008979244,0.00013791953,0.98619777,0.00033923244,0.011998477,0.00020078561],"about_ca_topic_score_codex":0.000021652317,"about_ca_topic_score_gemma":0.0000022742713,"teacher_disagreement_score":0.1524774,"about_ca_system_score_codex":0.000011835128,"about_ca_system_score_gemma":0.00007569,"threshold_uncertainty_score":0.7983853},"labels":[],"label_agreement":null},{"id":"W30317470","doi":"10.1007/978-1-60761-938-3_16","title":"Methods to Study Glycoproteins at the Blood-Brain Barrier Using Mass Spectrometry","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Glycoprotein; Proteomics; Quantitative proteomics; Glycosylation; Chemistry; Blood–brain barrier; Glycoproteomics; Biochemistry; Cell biology; Glycan; Computational biology; Biology; Neuroscience; Gene; Central nervous system","score_opus":0.026665118047863465,"score_gpt":0.44062828008916327,"score_spread":0.4139631620412998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W30317470","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4953854,0.00019847632,0.50241476,0.0004141996,0.00022865729,0.00091897306,0.000009130055,0.000012203072,0.00041815997],"genre_scores_gemma":[0.07854695,0.0000061892474,0.9188957,0.0010714154,0.0001642423,0.00023013126,0.000023707258,0.00006177504,0.0009998926],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99306434,0.00447113,0.00050365954,0.0009899853,0.00021558761,0.0007552722],"domain_scores_gemma":[0.997884,0.00023012949,0.0001158899,0.0014054462,0.00013378613,0.00023075272],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0064154766,0.0003525063,0.0003950526,0.00033925075,0.0002402126,0.00004754296,0.0008153118,0.0004443341,0.00052981346],"category_scores_gemma":[0.0037230542,0.00027405442,0.00018548685,0.0008168238,0.00025953486,0.000003961377,0.0008433501,0.0007081013,0.000022184042],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000119693505,0.0001468573,0.0042949268,0.0000052281493,0.00011455011,0.00003439652,0.000084744606,0.00006205357,0.9822734,0.00038685423,0.000026268737,0.012451045],"study_design_scores_gemma":[0.00094320276,0.000739546,0.001035852,0.0000030587767,0.00002917894,0.00006348092,0.00010996417,0.00018216565,0.97339696,0.00134045,0.021820316,0.0003358251],"about_ca_topic_score_codex":0.00016394869,"about_ca_topic_score_gemma":0.0002665724,"teacher_disagreement_score":0.41683847,"about_ca_system_score_codex":0.000040174556,"about_ca_system_score_gemma":0.00012093833,"threshold_uncertainty_score":0.99997115},"labels":[],"label_agreement":null},{"id":"W3033374387","doi":"10.1007/978-1-0716-0640-7_15","title":"Generation and Analysis of CCM Phenotypes in C. elegans","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Phenotype; Biology; Computational biology; Genetics; Gene","score_opus":0.031947597772111654,"score_gpt":0.33985675092011436,"score_spread":0.3079091531480027,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033374387","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025405468,0.008795899,0.9549614,0.00019645695,0.00021403552,0.0003819478,0.000096585114,0.000010519735,0.009937644],"genre_scores_gemma":[0.09056916,0.003771442,0.8954544,0.0014006312,0.00029705075,0.000035738776,0.0021512678,0.00016326437,0.0061570625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980374,0.0003571823,0.00055397605,0.00074874354,0.00008193926,0.00022074378],"domain_scores_gemma":[0.9991416,0.000033759487,0.00022548389,0.0004685871,0.00006631111,0.00006426996],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005736112,0.00032678212,0.00077815226,0.00044510205,0.00001815989,0.000009693966,0.00023987232,0.00075870956,0.000036952748],"category_scores_gemma":[0.0001644053,0.00035210338,0.00019600388,0.00014155249,0.00020391017,0.00000144381,0.00021416113,0.00026946803,0.0000013293314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025856807,0.000022067885,0.0012390548,0.000033386437,0.00054338085,0.000011941628,0.00015346141,0.00063067797,0.9801089,0.011432881,0.000022163375,0.005776199],"study_design_scores_gemma":[0.0015771901,0.0012072654,0.001999088,0.000059000376,0.0022363616,0.000014679253,0.000045610275,0.0102227265,0.9120412,0.030868825,0.03789428,0.0018337603],"about_ca_topic_score_codex":0.000055273336,"about_ca_topic_score_gemma":0.00034896965,"teacher_disagreement_score":0.068067715,"about_ca_system_score_codex":0.000020506419,"about_ca_system_score_gemma":0.000067047666,"threshold_uncertainty_score":0.99989307},"labels":[],"label_agreement":null},{"id":"W3033539111","doi":"10.1007/978-1-0716-0640-7_36","title":"Affinity Purification and Preparation of Peptides for Mass Spectrometry from C. elegans","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Mass spectrometry; Chemistry; Affinity chromatography; Agarose; Chromatography; Protein purification; In vivo; Biochemistry; Molecular biology; Biology; Enzyme","score_opus":0.023546453445222725,"score_gpt":0.3589757496653104,"score_spread":0.33542929622008766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033539111","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0017950779,0.014652702,0.9587089,0.00031962848,0.00023544782,0.00067827664,0.00025428322,0.0000148549,0.023340836],"genre_scores_gemma":[0.005398236,0.0029296235,0.9862867,0.00015578847,0.00016443085,0.000037189417,0.000802067,0.00005159229,0.0041743694],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985765,0.00019227958,0.00040852552,0.0006153815,0.00004996001,0.00015731913],"domain_scores_gemma":[0.9992044,0.00009835184,0.0002744473,0.0003019512,0.000078405705,0.00004244056],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00037217524,0.0002643208,0.00047589742,0.00010084364,0.00003330436,0.0000067311844,0.00015507937,0.00095072604,0.0000092911705],"category_scores_gemma":[0.0003043938,0.00025309235,0.0001528105,0.000037261878,0.00022732838,0.0000013436812,0.00010484544,0.00023505047,0.0000011710114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014017937,0.000013031348,0.00007501875,0.000051389154,0.00026123069,0.0000014660604,0.00003407711,0.0000031898421,0.9797167,0.017581679,0.0001038165,0.0020182165],"study_design_scores_gemma":[0.0005206367,0.0007514184,0.0000864023,0.00004235418,0.0001400248,0.00000290549,0.000024249102,0.000048944625,0.9018024,0.06360879,0.032625966,0.00034589102],"about_ca_topic_score_codex":0.000010498241,"about_ca_topic_score_gemma":0.000011880986,"teacher_disagreement_score":0.07791429,"about_ca_system_score_codex":0.0000146443335,"about_ca_system_score_gemma":0.000045623907,"threshold_uncertainty_score":0.99999213},"labels":[],"label_agreement":null},{"id":"W3033858809","doi":"10.1007/978-1-0716-0585-1_14","title":"Ex Vivo Analysis of Axonal Degeneration Using Sciatic and Optic Nerve Preparations","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Wallerian degeneration; Axotomy; In vivo; Sciatic nerve; Ex vivo; Optic nerve; Explant culture; Peripheral nervous system; Biology; Neuroscience; Pathology; In vitro; Anatomy; Central nervous system; Medicine","score_opus":0.09836139150371263,"score_gpt":0.440769454502931,"score_spread":0.34240806299921833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3033858809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5067827,0.00007544291,0.49285442,0.00011293509,0.000039248887,0.00007746834,0.000006548521,0.000006074811,0.000045140663],"genre_scores_gemma":[0.5713413,0.000004689169,0.42838028,0.00023097108,0.000018774486,0.0000062357167,0.0000066446937,0.000004561019,0.000006568529],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976662,0.0014853369,0.00031454052,0.00034450466,0.00006643756,0.00012300305],"domain_scores_gemma":[0.99947584,0.00019561432,0.00012396828,0.00013107176,0.00002927095,0.000044231114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044225767,0.000091259964,0.0002533507,0.00022641453,0.000058361562,0.000014973458,0.000092215654,0.00009048142,0.000024710604],"category_scores_gemma":[0.00080472697,0.00008379109,0.00007356914,0.0010290418,0.0001246092,0.000052943855,0.000054909666,0.00007778034,4.940369e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001206088,0.000018084653,0.0007172385,0.00000702389,0.000026991347,0.0000058898295,0.00013463653,0.024325058,0.96289676,0.011440789,0.0000010162423,0.0004144547],"study_design_scores_gemma":[0.00008389586,0.00006249577,0.000086036845,0.0000018272673,0.00011204673,0.0000035216985,0.0000073385913,0.30462503,0.6943238,0.00062350975,0.000011327702,0.000059173788],"about_ca_topic_score_codex":0.00001752607,"about_ca_topic_score_gemma":0.000009644205,"teacher_disagreement_score":0.28029996,"about_ca_system_score_codex":0.000017031078,"about_ca_system_score_gemma":0.000036758567,"threshold_uncertainty_score":0.34169018},"labels":[],"label_agreement":null},{"id":"W3034359176","doi":"10.1007/978-1-0716-0599-8_2","title":"In Vitro Expansion of Corneal Endothelial Cells for Transplantation","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec; Hôpital du Saint-Sacrement","funders":"","keywords":"Stroma; Corneal endothelium; Stromal cell; Transplantation; Corneal transplantation; Cornea; Endothelium; Economic shortage; In vitro; Ophthalmology; Cell biology; Biology; Chemistry; Anatomy; Medicine; Pathology; Immunology; Surgery; Biochemistry; Endocrinology; Immunohistochemistry","score_opus":0.03971461363130722,"score_gpt":0.3895602947802865,"score_spread":0.34984568114897924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034359176","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40534303,0.000096190604,0.5936898,0.00027343055,0.00011056386,0.0003456544,0.00004711448,0.000006494535,0.0000877315],"genre_scores_gemma":[0.5431282,0.000041739302,0.45609224,0.00060734,0.000020490106,0.000036895854,0.000057127796,0.000008408259,0.0000075492103],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991029,0.00030576115,0.0002381804,0.00018903101,0.000031894087,0.00013223928],"domain_scores_gemma":[0.9995692,0.0002531387,0.000046575635,0.00007397386,0.000016633598,0.000040489194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027477066,0.000078586105,0.00029732805,0.00007530552,0.000006067136,7.3266864e-7,0.000033304186,0.00009696364,0.00001639904],"category_scores_gemma":[0.00010736563,0.000069048605,0.0000791925,0.00013155262,0.000031759904,0.000010533189,0.00000803593,0.000072872506,0.0000012547088],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0022164902,0.000065869775,0.0013323188,0.00007810083,0.00001611343,0.00010613805,0.00022236253,0.000010892663,0.9715422,0.000135859,0.000002331968,0.02427132],"study_design_scores_gemma":[0.0022832765,0.00037932614,0.000516156,0.000014331151,0.000034261986,0.000008726113,0.000013996235,0.00047767218,0.99508107,0.00079184497,0.00034920606,0.00005011923],"about_ca_topic_score_codex":0.00003931546,"about_ca_topic_score_gemma":0.0000018081,"teacher_disagreement_score":0.1377852,"about_ca_system_score_codex":0.000015824842,"about_ca_system_score_gemma":0.000032523443,"threshold_uncertainty_score":0.28157204},"labels":[],"label_agreement":null},{"id":"W3034432210","doi":"10.1007/978-1-0716-0672-8_13","title":"Galvanotropic Chamber for Controlled Reorientation of Pollen Tube Growth and Simultaneous Confocal Imaging of Intracellular Dynamics","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Pollen tube; Confocal; Confocal laser scanning microscopy; Tube (container); Confocal microscopy; Pollen; Live cell imaging; Seeding; Cell biology; Double fertilization; Biology; Biophysics; Biological system; Botany; Materials science; Optics; Cell; Pollination; Physics","score_opus":0.00965027343435912,"score_gpt":0.3119403446788656,"score_spread":0.30229007124450646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034432210","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007835033,0.0076949513,0.97397393,0.00036607744,0.00042408964,0.001909271,0.00055222685,0.00001446172,0.0072299577],"genre_scores_gemma":[0.28889093,0.0018515124,0.69921523,0.00058760855,0.00044384453,0.00017582641,0.0038215371,0.000239479,0.0047740215],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99753726,0.0003662621,0.0008295307,0.0009111956,0.00007771913,0.0002780202],"domain_scores_gemma":[0.9982866,0.00037900038,0.00062130205,0.00039482897,0.00025229176,0.00006599828],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00062592514,0.00040981805,0.0012223144,0.000181246,0.000022529517,0.000004094538,0.0001967479,0.0006943037,0.0000071991694],"category_scores_gemma":[0.001966536,0.00039741246,0.0002515259,0.000041706746,0.00058976474,0.000002135282,0.00020683276,0.00024950103,3.5999054e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014426459,0.000024414616,0.00029284565,0.00015993619,0.00030458492,0.000028787552,0.000027072692,0.000024372841,0.92785865,0.06498788,0.000008845307,0.004839991],"study_design_scores_gemma":[0.0075651845,0.0021549016,0.000038258833,0.00010307721,0.00043352193,0.00017194216,0.000056363133,0.0044785775,0.93559015,0.041094813,0.0073547205,0.00095850776],"about_ca_topic_score_codex":0.000020573823,"about_ca_topic_score_gemma":0.000011320142,"teacher_disagreement_score":0.2810559,"about_ca_system_score_codex":0.00003063421,"about_ca_system_score_gemma":0.00011130728,"threshold_uncertainty_score":0.99984777},"labels":[],"label_agreement":null},{"id":"W3034569815","doi":"10.1007/978-1-0716-0599-8_8","title":"The Self-assembly Approach as a Tool for the Tissue Engineering of a Bi-lamellar Human Cornea","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Cornea; Tissue engineering; Stroma; Stromal cell; Regenerative medicine; Extracellular matrix; Cell biology; Anatomy; Biology; Biomedical engineering; Pathology; Ophthalmology; Medicine; Stem cell; Immunohistochemistry","score_opus":0.03516424425074962,"score_gpt":0.38204248128635093,"score_spread":0.34687823703560133,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034569815","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16493873,0.001879512,0.83067197,0.0009396409,0.000114791736,0.0010688336,0.000005073772,0.000044303804,0.00033712457],"genre_scores_gemma":[0.47672158,0.00008592602,0.5221671,0.0005860384,0.00007079507,0.0002745214,0.00001921665,0.000031403768,0.000043418342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889755,0.00030513929,0.00026970773,0.00023702181,0.00005921162,0.00023137228],"domain_scores_gemma":[0.9986516,0.0009112286,0.00007241791,0.0002792359,0.00003805822,0.000047433372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008464086,0.00013524039,0.000325385,0.000035953704,0.00006598629,0.000006803462,0.00014986815,0.000113556416,0.000004859738],"category_scores_gemma":[0.00069595774,0.000077693236,0.00012182655,0.00023148971,0.00005254991,0.000007269382,0.000068741574,0.00015405445,0.0000018985282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020924173,0.00015259738,0.0028287834,0.00011861415,0.00044282962,0.000041725627,0.00035403064,0.000114794646,0.92395204,0.01400175,0.00002999912,0.057753567],"study_design_scores_gemma":[0.0025150452,0.0018546194,0.0034212817,0.00003748096,0.0004575961,0.00008059703,0.00014268506,0.015444076,0.9204256,0.002125273,0.05320668,0.00028909039],"about_ca_topic_score_codex":0.000024658553,"about_ca_topic_score_gemma":8.090996e-7,"teacher_disagreement_score":0.31178287,"about_ca_system_score_codex":0.000023004537,"about_ca_system_score_gemma":0.0000428209,"threshold_uncertainty_score":0.31682384},"labels":[],"label_agreement":null},{"id":"W3034607684","doi":"10.1007/978-1-0716-0599-8_12","title":"Synthesis and Application of Collagens for Assembling a Corneal Implant","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Collagen: Extraction and Characterization","field":"Materials Science","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"Agence Nationale de la Recherche","keywords":"Regenerative medicine; Cornea; Recombinant DNA; Tissue engineering; Biomedical engineering; Implant; Chemistry; Biology; Biochemistry; Surgery; Engineering; Medicine; Cell; Neuroscience","score_opus":0.03703956045184726,"score_gpt":0.36818490266259063,"score_spread":0.3311453422107434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034607684","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0013330141,0.00015825433,0.9939918,0.0001387884,0.00021780141,0.0005790509,0.00019201974,0.000024133687,0.003365151],"genre_scores_gemma":[0.019947752,0.00018521486,0.9772577,0.00038075546,0.00012098691,0.0002902692,0.00018441866,0.00007236075,0.0015605168],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988239,0.00018546183,0.00040163964,0.0004090682,0.000054621327,0.00012530135],"domain_scores_gemma":[0.9989109,0.0004375132,0.00035434912,0.00018259772,0.0000716752,0.0000429557],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006752353,0.00016644574,0.00044341126,0.00013275028,0.000033195756,0.000013979655,0.000119623386,0.0003380376,0.00005731255],"category_scores_gemma":[0.0002786914,0.00016943483,0.00006907234,0.00004307376,0.00007626369,0.000015725165,0.0000643883,0.000080626036,0.0000041388607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005625121,0.0000067075616,0.0000064314986,0.00007888742,0.00001206745,0.0000036913395,0.000027787537,0.0000041790067,0.9442309,0.035905022,0.000009630177,0.019658457],"study_design_scores_gemma":[0.00021322699,0.0001176376,0.000032906097,0.000042046275,0.00007797913,0.000028621209,0.000013654994,0.001278433,0.9487337,0.014209983,0.035013534,0.00023828821],"about_ca_topic_score_codex":0.00000766896,"about_ca_topic_score_gemma":0.000008577049,"teacher_disagreement_score":0.035003904,"about_ca_system_score_codex":0.000032777083,"about_ca_system_score_gemma":0.000050241488,"threshold_uncertainty_score":0.6909352},"labels":[],"label_agreement":null},{"id":"W3034928183","doi":"10.1007/978-1-0716-0672-8_15","title":"Silicone Chambers for Pollen Tube Imaging in Microstructured In Vitro Environments","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Silicone; Microfluidics; Materials science; Nanotechnology; Tube (container); Soft lithography; Pollen tube; Resolution (logic); Biomedical engineering; Optics; Pollen; Composite material; Computer science; Engineering; Biology; Fabrication; Botany; Physics","score_opus":0.01356774396742827,"score_gpt":0.31975671517415244,"score_spread":0.30618897120672417,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3034928183","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1067903,0.09288908,0.70679384,0.0071818675,0.0062267426,0.018107936,0.0054506892,0.00016105198,0.05639851],"genre_scores_gemma":[0.024164075,0.0012700495,0.9513733,0.0039413488,0.0005908636,0.0005194923,0.0071812007,0.00043210588,0.010527562],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960884,0.00058707845,0.00076480076,0.0018347648,0.00007288439,0.00065207394],"domain_scores_gemma":[0.9988029,0.000093767536,0.00027839566,0.00071017735,0.000022537437,0.00009225075],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009216043,0.00064378255,0.000982325,0.00032235615,0.000029434785,0.000010930787,0.0004944525,0.0011451737,0.000017763667],"category_scores_gemma":[0.0005210275,0.0006928248,0.0002487316,0.00006993165,0.00045209506,0.0000029244188,0.000449352,0.00058098615,0.000005639243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006659251,0.000027050026,0.00063233223,0.000029724344,0.0000717139,0.00009421554,0.00003707061,0.000020644151,0.98653203,0.00082816475,0.00004519489,0.01101592],"study_design_scores_gemma":[0.0019027438,0.00022842392,0.00035685953,0.00003581351,0.000030083787,0.00007922007,0.000014956024,0.000066400135,0.8302066,0.01174314,0.15451467,0.00082109054],"about_ca_topic_score_codex":0.000048563037,"about_ca_topic_score_gemma":0.000051630006,"teacher_disagreement_score":0.24457948,"about_ca_system_score_codex":0.00015271085,"about_ca_system_score_gemma":0.00013160224,"threshold_uncertainty_score":0.9995523},"labels":[],"label_agreement":null},{"id":"W3035037548","doi":"10.1007/978-1-0716-0672-8_2","title":"A Toolkit for Teasing Apart the Early Stages of Pollen–Stigma Interactions in Arabidopsis thaliana","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Gynoecium; Pollen; Pollen tube; Biology; Stigma (botany); Mutant; Double fertilization; Brassicaceae; Arabidopsis thaliana; Arabidopsis; Germination; Pollination; Function (biology); Botany; Genetics; Gene; Stamen","score_opus":0.04896842271061383,"score_gpt":0.3958163512333977,"score_spread":0.3468479285227839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035037548","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.67691624,0.0011815184,0.31872305,0.0019248371,0.0002194137,0.00056119775,0.00008335666,0.00000939907,0.00038099958],"genre_scores_gemma":[0.7090827,0.00009867232,0.2892851,0.0010291523,0.00016423577,0.00015554605,0.00009070053,0.000028732507,0.00006514928],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99744576,0.0011497597,0.00041794218,0.000612809,0.00004401026,0.0003297021],"domain_scores_gemma":[0.9991004,0.00021749314,0.00016123382,0.0004018738,0.00007018975,0.000048835358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009491066,0.0001908026,0.0003604757,0.000102300844,0.000037988044,0.000007375903,0.00037070143,0.00017664646,0.000009466058],"category_scores_gemma":[0.0022810313,0.00015212635,0.0001446955,0.00025086303,0.00024075495,0.000003787824,0.00017561704,0.0002099716,0.000001423527],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002454866,0.00004402437,0.030881962,0.000018396722,0.00006546438,0.0000042753536,0.00016678422,0.000067103996,0.963043,0.0009131251,0.00008094612,0.0044694412],"study_design_scores_gemma":[0.00070726225,0.00049131893,0.0107278405,0.000018055416,0.00002649526,0.000022846663,0.0001891473,0.0001101245,0.96393746,0.0015719278,0.021944974,0.00025254212],"about_ca_topic_score_codex":0.00014276849,"about_ca_topic_score_gemma":0.00010003105,"teacher_disagreement_score":0.03216649,"about_ca_system_score_codex":0.000020299507,"about_ca_system_score_gemma":0.00007051121,"threshold_uncertainty_score":0.6203533},"labels":[],"label_agreement":null},{"id":"W3035200285","doi":"10.1007/978-1-0716-0732-9_5","title":"Quantitative Image Analysis of the Spatial Organization and Mobility of Caveolin Aggregates at the Plasma Membrane","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; University of Toronto","funders":"","keywords":"Total internal reflection fluorescence microscope; Caveolae; Membrane; Pixel; Chemistry; Fluorescence; Biological system; Biophysics; Physics; Biology; Optics; Biochemistry","score_opus":0.013131154069990344,"score_gpt":0.3305563272807701,"score_spread":0.3174251732107798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035200285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76130605,0.0010602034,0.23709893,0.00026742247,0.000031488315,0.00014509371,0.00003291486,0.000002464884,0.000055420398],"genre_scores_gemma":[0.9669216,0.00021130084,0.032536205,0.00017726081,0.000014406124,0.000007495819,0.00009761976,0.000012703804,0.00002136794],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99836975,0.0007981172,0.00031796625,0.00032219558,0.00006648983,0.00012548536],"domain_scores_gemma":[0.9991617,0.00013275791,0.00021761956,0.0003015486,0.00015625017,0.000030101786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005567565,0.00012507837,0.00030952858,0.0000497952,0.000042074356,0.0000044632357,0.00023215424,0.00014596546,0.000029735984],"category_scores_gemma":[0.0017084349,0.00008036334,0.00011622282,0.0007377466,0.0004838538,0.0000017537799,0.00032669754,0.00008827527,2.862947e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008875122,0.000029760768,0.0118092215,0.00003966221,0.00024293485,8.8230706e-7,0.00024784546,0.0003708451,0.9858995,0.00031630904,0.000002217214,0.0009520337],"study_design_scores_gemma":[0.00025545133,0.00014930211,0.0025774054,0.0000036518177,0.00022106047,0.000002828613,0.00011366417,0.0017588559,0.99447274,0.00016470003,0.00019596762,0.00008435795],"about_ca_topic_score_codex":0.00010091204,"about_ca_topic_score_gemma":0.00017644925,"teacher_disagreement_score":0.20561558,"about_ca_system_score_codex":0.0000069940183,"about_ca_system_score_gemma":0.00004829709,"threshold_uncertainty_score":0.32771218},"labels":[],"label_agreement":null},{"id":"W3035791064","doi":"10.1007/978-1-0716-0751-0_12","title":"A Prunus necrotic ringspot virus (PNRSV)-Based Viral Vector for Characterization of Gene Functions in Prunus Fruit Trees","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Prunus; Gene; Vector (molecular biology); Gene silencing; Transformation (genetics); Viral vector; Genetics; Tobacco rattle virus; Virology; Virus; Computational biology; Botany","score_opus":0.06492610173790947,"score_gpt":0.35553602570705606,"score_spread":0.2906099239691466,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3035791064","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9002728,0.00015569864,0.09676719,0.0013936369,0.00007766181,0.0007106151,0.00056523026,0.000030471405,0.000026706397],"genre_scores_gemma":[0.8729607,0.000051604617,0.12457356,0.0010994683,0.00015733886,0.0005608685,0.00055710995,0.0000057333978,0.00003365405],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981266,0.00071978214,0.0003434227,0.00037632746,0.00008784071,0.00034601588],"domain_scores_gemma":[0.99919474,0.0005108477,0.00011152528,0.00005867013,0.00005895861,0.000065269625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005767185,0.00015320662,0.00037389479,0.000059618753,0.000059113336,0.000012156412,0.0002412762,0.00014170623,0.000038144775],"category_scores_gemma":[0.0011067091,0.00007522101,0.00010314537,0.0005541425,0.0001125944,0.000033171877,0.00007759146,0.00014686168,0.000003150764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025353563,0.00007961942,0.002074018,0.000018389368,0.000017623075,0.000007732221,0.000052370797,0.000039635357,0.9857834,0.00008484033,0.0000041591898,0.011584673],"study_design_scores_gemma":[0.0005389966,0.0008943619,0.109249525,0.000017987915,0.000012784255,0.0000012645613,0.00003107479,0.0025718096,0.882825,0.00032107925,0.0033426478,0.00019345338],"about_ca_topic_score_codex":0.00021740599,"about_ca_topic_score_gemma":0.00035696963,"teacher_disagreement_score":0.10717551,"about_ca_system_score_codex":0.000033419397,"about_ca_system_score_gemma":0.000022376471,"threshold_uncertainty_score":0.30674237},"labels":[],"label_agreement":null},{"id":"W3036616992","doi":"10.1007/978-1-0716-0751-0_7","title":"Virus-Induced Gene Silencing to Investigate Alkaloid Biosynthesis in Opium Poppy","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Berberine and alkaloids research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Opium Poppy; Benzylisoquinoline; Papaver; Gene silencing; Poppy; Gene; Alkaloid; Biology; Genetics; Biosynthesis; Botany","score_opus":0.08720324197081826,"score_gpt":0.44114888539773994,"score_spread":0.3539456434269217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3036616992","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8707517,0.00037685904,0.11617785,0.0112245595,0.00009410512,0.0005094583,0.000006673748,0.00004691596,0.0008118839],"genre_scores_gemma":[0.28141415,0.00007349146,0.7067285,0.01148487,0.00012053714,0.00007777842,0.0000136545605,0.000047353315,0.000039614384],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967093,0.0014356407,0.0004632753,0.0006502835,0.00014277553,0.00059875357],"domain_scores_gemma":[0.9988569,0.00026239888,0.000047792906,0.00038074856,0.00005334345,0.0003988097],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014579722,0.0002303769,0.00062054716,0.0004262534,0.000026314488,0.000011505142,0.00026965322,0.00025003904,0.00010171999],"category_scores_gemma":[0.00351234,0.00021073272,0.00010316645,0.0011794496,0.00008472838,0.000025609177,0.00029078507,0.0005444133,0.00006276073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010717922,0.000048492606,0.0033821096,0.000042314794,0.000027247866,0.00033071105,0.00033858663,0.000018448174,0.9599254,0.0001563336,0.00004040465,0.03558276],"study_design_scores_gemma":[0.0006888262,0.0005258298,0.0020622492,0.000051541752,0.000013949734,0.000021197524,0.00008089192,0.0006262404,0.9928819,0.00055252534,0.0022846148,0.00021023693],"about_ca_topic_score_codex":0.0006455982,"about_ca_topic_score_gemma":0.00006912892,"teacher_disagreement_score":0.5905507,"about_ca_system_score_codex":0.000089392415,"about_ca_system_score_gemma":0.00016190573,"threshold_uncertainty_score":0.8593431},"labels":[],"label_agreement":null},{"id":"W3038947326","doi":"10.1007/978-1-0716-0660-5_11","title":"Phenotyping Plant Cellular and Tissue Level Responses to Cold with Synchrotron-Based Fourier-Transform Infrared Spectroscopy and X-Ray Computed Tomography","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant biochemistry and biosynthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Light Source (Canada); University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Synchrotron radiation; Synchrotron; Fourier transform infrared spectroscopy; Fourier transform; Biological system; Infrared; Abiotic component; Materials science; Biomedical engineering; Computer science; Nanotechnology; Optics; Engineering; Physics; Biology; Ecology","score_opus":0.018850215849788795,"score_gpt":0.29809419475889515,"score_spread":0.27924397890910635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3038947326","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3568545,0.0010425205,0.6406168,0.0007847265,0.000025291078,0.0003527727,0.00019644861,0.000020693606,0.000106282394],"genre_scores_gemma":[0.33917466,0.000036892823,0.6587784,0.0017181268,0.000059679533,0.000037828322,0.00014519751,0.000026722091,0.000022464816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801606,0.00047657714,0.0002727902,0.0007436064,0.00008353408,0.00040741943],"domain_scores_gemma":[0.9992542,0.00012746658,0.00007421867,0.00027033384,0.00003874988,0.00023501641],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045810823,0.0003220739,0.00039254702,0.0001096866,0.00007881621,0.000030267485,0.00021773281,0.00030815636,0.0000061777514],"category_scores_gemma":[0.00020671102,0.00028656275,0.00005052192,0.00026817858,0.0002222298,0.0000034191817,0.00010985142,0.00017931774,6.786097e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001161384,0.000034564346,0.0015798899,0.000075019576,0.00007641389,0.0000615786,0.000052300948,0.000042393556,0.9947664,0.000068000656,0.000053929827,0.0020281393],"study_design_scores_gemma":[0.0007899021,0.0009667085,0.00044821642,0.00004993394,0.000037211237,0.000018735645,0.000033230906,0.00073203613,0.9838607,0.00006259715,0.0126033295,0.00039740885],"about_ca_topic_score_codex":0.000017135917,"about_ca_topic_score_gemma":0.000010831456,"teacher_disagreement_score":0.018161643,"about_ca_system_score_codex":0.000011203401,"about_ca_system_score_gemma":0.00007990877,"threshold_uncertainty_score":0.99995863},"labels":[],"label_agreement":null},{"id":"W3039979605","doi":"10.1007/978-1-0716-0708-4_5","title":"Prediction of Intrinsic Disorder with Quality Assessment Using QUARTER","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Quarter (Canadian coin); Computer science; Correctness; Toolbox; Web server; Quality (philosophy); Set (abstract data type); Artificial intelligence; Data mining; Machine learning; The Internet; World Wide Web; Algorithm","score_opus":0.032360918094434275,"score_gpt":0.39133590449151817,"score_spread":0.3589749863970839,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3039979605","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3140633,0.0002090003,0.6852069,0.00013800983,0.000042080956,0.0001494358,0.00001754904,0.0000058115857,0.0001679028],"genre_scores_gemma":[0.41505393,0.000013191347,0.5844537,0.00035191642,0.000043506265,0.000011182986,0.00005909062,0.000011688765,0.0000017623219],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982415,0.00081803545,0.00033087895,0.00036303434,0.0000675271,0.00017905675],"domain_scores_gemma":[0.9994608,0.000022318263,0.0001410479,0.00026764974,0.000058353973,0.00004982905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047488423,0.00014258262,0.0002650846,0.00004242933,0.000020109102,0.000004439074,0.00014156323,0.00019980312,0.000006951321],"category_scores_gemma":[0.00013744844,0.000119202115,0.00006329366,0.00015960056,0.00012503575,0.000002296322,0.000098447454,0.00014040747,1.6681382e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102215214,0.00002571752,0.030024836,0.000027539183,0.000048162932,0.0000024119347,0.000038154416,0.00037774837,0.9619353,0.0019492324,0.0000029947419,0.0054657212],"study_design_scores_gemma":[0.0034212563,0.003261777,0.043986406,0.000034548095,0.000094821626,0.000034405304,0.00034037666,0.0053268815,0.931939,0.0054096607,0.005485915,0.0006649545],"about_ca_topic_score_codex":0.000047120884,"about_ca_topic_score_gemma":0.0000150040005,"teacher_disagreement_score":0.10099062,"about_ca_system_score_codex":0.000013635491,"about_ca_system_score_gemma":0.000076080236,"threshold_uncertainty_score":0.48609212},"labels":[],"label_agreement":null},{"id":"W3040625440","doi":"10.1007/978-1-0716-0660-5_6","title":"A Whole-Plant Screening Test to Select Freezing-Tolerant and Low-Dormant Genotypes","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Turfgrass Adaptation and Management","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Freezing tolerance; Biology; Perennial plant; Genotype; Cultivar; Population; Horticulture; Dormancy; Persistence (discontinuity); Botany; Agronomy; Germination; Demography; Genetics","score_opus":0.021573859761894656,"score_gpt":0.316313635837641,"score_spread":0.29473977607574636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3040625440","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06081107,0.000093086004,0.93540555,0.0026172665,0.00003897335,0.00024613936,0.000007847577,0.000034152807,0.0007459013],"genre_scores_gemma":[0.1749416,0.000012013796,0.81746316,0.0074774786,0.00001533144,0.000027320544,0.000010524735,0.00001337602,0.000039211074],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988288,0.00027590353,0.00018754604,0.00037900757,0.00007572039,0.0002530184],"domain_scores_gemma":[0.99961203,0.000092596776,0.000039068585,0.00012497087,0.0000038253143,0.00012751482],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044902193,0.00012583056,0.00017620917,0.000048690283,0.00004373427,0.000017333297,0.00016505113,0.00005642847,0.00011123329],"category_scores_gemma":[0.00026824226,0.00011243824,0.000026864584,0.00026379546,0.00006955037,0.000025669544,0.00029399776,0.00011759509,0.00006736522],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016798238,0.000020359774,0.010984434,0.0000075512107,0.000009166717,0.000032257016,0.00050046545,0.0018806062,0.94440037,0.00035774655,0.00023496222,0.041555274],"study_design_scores_gemma":[0.002637202,0.0017400212,0.17544034,0.00007809805,0.000082547915,0.00004907567,0.00071667315,0.14989994,0.28774083,0.0029643986,0.37700045,0.0016504393],"about_ca_topic_score_codex":0.00018924227,"about_ca_topic_score_gemma":0.00012268675,"teacher_disagreement_score":0.65665954,"about_ca_system_score_codex":0.000024892835,"about_ca_system_score_gemma":0.0000040970144,"threshold_uncertainty_score":0.45850983},"labels":[],"label_agreement":null},{"id":"W3042451095","doi":"10.1007/978-1-0716-0680-3_9","title":"2D Saturation Transfer Difference NMR for Determination of Protein Binding Sites on RNA Guanine Quadruplexes","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Saturation (graph theory); Intermolecular force; Chemistry; Two-dimensional nuclear magnetic resonance spectroscopy; RNA; Crystallography; Molecule; Guanine; Nuclear magnetic resonance; Analytical Chemistry (journal); Stereochemistry; Nucleotide; Biochemistry; Physics; Organic chemistry; Mathematics","score_opus":0.0280383815237914,"score_gpt":0.3514151264942487,"score_spread":0.3233767449704573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042451095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5161765,0.00011761187,0.48319718,0.00016392859,0.000021012833,0.00021339039,0.00001905794,0.0000062713007,0.000085054045],"genre_scores_gemma":[0.69546163,0.000017816117,0.30389705,0.00023427063,0.00006219538,0.00007109268,0.00019252379,0.000019350406,0.000044071243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880403,0.00023575572,0.00029921564,0.00040468105,0.00005754639,0.00019875287],"domain_scores_gemma":[0.99957013,0.0000527697,0.00007692126,0.00019405285,0.000056974357,0.000049128994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028898267,0.00017051029,0.0002426502,0.00004849722,0.000028295894,0.000007015524,0.00019452114,0.00027335345,0.000011576472],"category_scores_gemma":[0.0005951555,0.00015909718,0.00010802529,0.000112530084,0.000085443695,0.0000023552952,0.000043776156,0.00010630507,6.802481e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002068924,0.000037586677,0.00024326555,0.00007332589,0.000015810267,0.0000013582539,0.00006645407,0.000009422723,0.9775502,0.00049147627,0.000006444621,0.021297762],"study_design_scores_gemma":[0.0005751289,0.0007164832,0.000100873425,0.000020503046,0.000014325974,0.0000015206779,0.000033675253,0.000832474,0.996391,0.000557095,0.000586949,0.00016999713],"about_ca_topic_score_codex":0.0000039930396,"about_ca_topic_score_gemma":0.0000026861096,"teacher_disagreement_score":0.17930011,"about_ca_system_score_codex":0.000011100153,"about_ca_system_score_gemma":0.000026958342,"threshold_uncertainty_score":0.6487795},"labels":[],"label_agreement":null},{"id":"W3042923362","doi":"10.1007/978-1-0716-0763-3_2","title":"Laser Targeted Oligo Ligation (LTOL) to Identify DNA Sequences in the Vicinity of a Single Subnuclear Structure in a Single Cell","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Ligation; DNA; Gene; Molecular biology; Computational biology; Biology; Proximity ligation assay; Cell; Genetics; Chemistry","score_opus":0.01859698657436236,"score_gpt":0.3280433488647166,"score_spread":0.3094463622903542,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3042923362","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9571225,0.0002548376,0.041630633,0.0004186218,0.00007931969,0.00028880354,0.00002638015,0.000004249209,0.00017462412],"genre_scores_gemma":[0.86020887,0.000015304126,0.13853191,0.0011152487,0.000025454785,0.000011623143,0.00007143812,0.000016953134,0.0000032272615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978375,0.0009992209,0.00042010512,0.00040740217,0.000073079646,0.0002626903],"domain_scores_gemma":[0.9994445,0.000049060396,0.00012751055,0.00028789538,0.000042896463,0.00004812275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061515375,0.00016965914,0.00027536522,0.00010412543,0.00001918989,0.0000150832275,0.00040666098,0.00027021542,0.000009927891],"category_scores_gemma":[0.0003529568,0.00014722125,0.000068488145,0.00044945398,0.000086379914,0.0000030207125,0.00016116096,0.0001810215,0.0000012711955],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003917172,0.00007909921,0.00344588,0.000027361204,0.00000844045,0.000011481006,0.0007201095,0.0011668117,0.9932637,0.00006112071,0.000010262263,0.0011665231],"study_design_scores_gemma":[0.00042472465,0.0004951011,0.0037899995,0.000012661553,0.0000075455473,0.0000043755203,0.0004113147,0.00070727314,0.9917262,0.0016555816,0.000594471,0.00017071504],"about_ca_topic_score_codex":0.000105875326,"about_ca_topic_score_gemma":0.00043978923,"teacher_disagreement_score":0.09691369,"about_ca_system_score_codex":0.000029492696,"about_ca_system_score_gemma":0.00004611959,"threshold_uncertainty_score":0.6003508},"labels":[],"label_agreement":null},{"id":"W3044620728","doi":"10.1007/978-1-0716-0712-1_3","title":"Visualization of Endoplasmic Reticulum-Associated mRNA in Mammalian Cells","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Endoplasmic reticulum; Ribosome; Cell biology; Secretory protein; Messenger RNA; Secretory pathway; STIM1; Cytosol; Biology; Gene; RNA; Biochemistry; Golgi apparatus; Enzyme","score_opus":0.020883692757390746,"score_gpt":0.34606003557825893,"score_spread":0.32517634282086816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044620728","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021694275,0.011274903,0.80228794,0.0004717385,0.0011950937,0.001959542,0.00039836313,0.00004939732,0.16066873],"genre_scores_gemma":[0.20233075,0.010395006,0.6896398,0.0030964264,0.0005759048,0.00045630246,0.007046573,0.00083029503,0.085628904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99773973,0.0005195056,0.00069420016,0.00068833394,0.000096614414,0.00026158997],"domain_scores_gemma":[0.9989122,0.000037664955,0.00041021043,0.0004774391,0.00010112384,0.0000613756],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00060611236,0.00032675668,0.0005719233,0.00022982064,0.000017928563,0.0000071624495,0.00032926424,0.0009697276,0.00007693541],"category_scores_gemma":[0.00022125176,0.00035705208,0.00018953651,0.00012667387,0.00017726579,0.0000016395769,0.00015398931,0.00028238073,0.000006739558],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044865406,0.000037766076,0.0001947411,0.00003644641,0.00006452115,0.000015022714,0.000027453101,0.00008561167,0.973632,0.022835234,0.00010589623,0.0029204707],"study_design_scores_gemma":[0.0007219207,0.0003593636,0.00008656022,0.00008258822,0.000047395326,0.0000042852384,0.000011941837,0.00014847195,0.94156283,0.008564458,0.047963794,0.00044641245],"about_ca_topic_score_codex":0.000045046294,"about_ca_topic_score_gemma":0.000067938,"teacher_disagreement_score":0.18063648,"about_ca_system_score_codex":0.00005659462,"about_ca_system_score_gemma":0.00013870095,"threshold_uncertainty_score":0.9998881},"labels":[],"label_agreement":null},{"id":"W3044728181","doi":"10.1007/978-1-0716-0716-9_1","title":"Conjugation as a Highly Sensitive Assay to Study Group II Intron Splicing In Vivo","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Intron; RNA splicing; Group II intron; Exon; Biology; Gene; Genetics; Alternative splicing; Group I catalytic intron; Exonic splicing enhancer; RNA","score_opus":0.017434276010762445,"score_gpt":0.33341284496058554,"score_spread":0.3159785689498231,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3044728181","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.037123922,0.0009190098,0.9138753,0.00080079515,0.00066015124,0.0036684147,0.00006549777,0.000049056314,0.042837873],"genre_scores_gemma":[0.16129635,0.0002599101,0.81664807,0.005678456,0.000662073,0.0005715139,0.00036244586,0.00038036582,0.014140821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955548,0.0018199644,0.0006988164,0.0013420928,0.00015675017,0.00042758312],"domain_scores_gemma":[0.9987428,0.00012800866,0.00026382375,0.0006396423,0.00008348277,0.0001422088],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00218818,0.00058079994,0.00087193353,0.0002799177,0.000068601636,0.00001863484,0.00038163012,0.0010014313,0.000058162783],"category_scores_gemma":[0.00072650285,0.00060842896,0.0001907906,0.000117676675,0.000078476216,0.0000027281772,0.00063357933,0.00046586097,0.00002540749],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002688525,0.00007006728,0.000036486937,0.000014535513,0.00014422444,0.0001722076,0.00020709624,0.000019731877,0.95953006,0.020366969,0.000022905167,0.019146858],"study_design_scores_gemma":[0.0008612525,0.0033540602,0.000022457158,0.00008947343,0.00006991562,0.000024489244,0.00011248741,0.000021072461,0.94508666,0.021759499,0.027849907,0.00074871077],"about_ca_topic_score_codex":0.00010200327,"about_ca_topic_score_gemma":0.00012290603,"teacher_disagreement_score":0.12417243,"about_ca_system_score_codex":0.00008574663,"about_ca_system_score_gemma":0.000079901634,"threshold_uncertainty_score":0.9996367},"labels":[],"label_agreement":null},{"id":"W3045114312","doi":"10.1007/978-1-0716-0716-9_14","title":"Cloning and Detection of Aptamer-Ribozyme Conjugations","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"","keywords":"Aptamer; Ribozyme; RNA; Nucleic acid; DNA; Computational biology; Biology; Molecular biology; Ligase ribozyme; Non-coding RNA; Transcription (linguistics); Cloning (programming); Gene; Genetics; Computer science","score_opus":0.022277800820714375,"score_gpt":0.3297185288256916,"score_spread":0.3074407280049772,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045114312","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008789492,0.005706714,0.96697426,0.00011647224,0.00020997557,0.0003857217,0.00003832661,0.00001327773,0.02567631],"genre_scores_gemma":[0.03621499,0.0017427318,0.9505223,0.00070274645,0.00025541938,0.00009685503,0.00023503097,0.00016971595,0.010060194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840206,0.00036552077,0.00041928008,0.00057002506,0.00006340343,0.00017972552],"domain_scores_gemma":[0.9991827,0.00006998311,0.000269398,0.00034960973,0.00006169473,0.00006662517],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005432303,0.00028292023,0.0004754053,0.00013380223,0.000034689445,0.0000070183787,0.00017819923,0.00078512763,0.00002862514],"category_scores_gemma":[0.00033223385,0.00029716082,0.00014633808,0.000038699684,0.00020407986,0.0000013414884,0.00019035306,0.00023392252,0.0000030999274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004112371,0.0000053360613,0.000008810575,0.000033974204,0.0000808422,0.0000057745783,0.000014157097,0.0000029775665,0.93513256,0.030969823,0.0000041206895,0.033700474],"study_design_scores_gemma":[0.00021598775,0.00039624507,0.0000055504147,0.000041674808,0.00004872983,0.000017552804,0.000007988491,0.000021130434,0.9151221,0.037561193,0.046296638,0.0002652048],"about_ca_topic_score_codex":0.000012703173,"about_ca_topic_score_gemma":0.000010946678,"teacher_disagreement_score":0.046292514,"about_ca_system_score_codex":0.000011802655,"about_ca_system_score_gemma":0.00005022614,"threshold_uncertainty_score":0.999948},"labels":[],"label_agreement":null},{"id":"W3045296335","doi":"10.1007/978-1-0716-0716-9_7","title":"Computer-Aided Design of Active Pseudoknotted Hammerhead Ribozymes","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Armand Frappier Museum; Institut National de la Recherche Scientifique","funders":"","keywords":"Ribozyme; Pseudoknot; RNA; Nucleic acid secondary structure; Computational biology; Nucleic acid structure; Ligase ribozyme; Computer science; Algorithm; Biology; Genetics; Gene","score_opus":0.03994698258954539,"score_gpt":0.341603055211583,"score_spread":0.30165607262203764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045296335","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008559201,0.0025258525,0.9844894,0.00015342921,0.0003454343,0.0007736149,0.000076804245,0.000022199109,0.011527687],"genre_scores_gemma":[0.0005785094,0.0005681663,0.99233365,0.00067577075,0.00023327302,0.00006995689,0.00026740786,0.0001438526,0.005129389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99632955,0.0013410111,0.00074154243,0.0010614597,0.00013737098,0.00038906556],"domain_scores_gemma":[0.99824816,0.00020291182,0.0005193296,0.0007769855,0.00013052984,0.000122067046],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00088375824,0.0006058547,0.0010729469,0.00021673575,0.000036815647,0.000009921497,0.00062680605,0.0014154011,0.000105787396],"category_scores_gemma":[0.00031405842,0.0006081722,0.0003718799,0.00007388238,0.00028615925,0.0000021670996,0.0003934003,0.00040647388,0.00001523886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028184883,0.000027440647,0.0000035459316,0.000048304057,0.00030732626,0.000039432663,0.000025787605,0.00006802046,0.91110235,0.018528316,0.00013780761,0.069429845],"study_design_scores_gemma":[0.0005387784,0.0011347173,0.000004874666,0.00009487275,0.000083375206,0.000023136909,0.000005955346,0.0001397821,0.9307036,0.040127806,0.026560329,0.0005827851],"about_ca_topic_score_codex":0.000013862896,"about_ca_topic_score_gemma":0.0000026442533,"teacher_disagreement_score":0.06884706,"about_ca_system_score_codex":0.000030905147,"about_ca_system_score_gemma":0.00017702453,"threshold_uncertainty_score":0.99988097},"labels":[],"label_agreement":null},{"id":"W3045301771","doi":"10.1007/978-1-0716-0716-9_5","title":"In Vitro Selection of Varkud Satellite Ribozyme Variants that Cleave a Modified Stem-Loop Substrate","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Ribozyme; Mammalian CPEB3 ribozyme; Cleave; Ligase ribozyme; Cleavage (geology); VS ribozyme; Stem-loop; Hairpin ribozyme; Phosphodiester bond; RNA; Biology; In vitro; Computational biology; Chemistry; Cell biology; Biochemistry; Gene; Enzyme","score_opus":0.039047655081050486,"score_gpt":0.32203675822270894,"score_spread":0.2829891031416585,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045301771","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008767261,0.008220366,0.9215127,0.00028102324,0.0008438941,0.0018611042,0.00018443738,0.00004205674,0.05828716],"genre_scores_gemma":[0.07438048,0.0056239967,0.8612765,0.0019828023,0.0004971094,0.00034027177,0.00084455975,0.0005659178,0.05448835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99613476,0.0012549473,0.00083173526,0.0011449503,0.00015599967,0.00047760914],"domain_scores_gemma":[0.99857765,0.00010076402,0.00051927415,0.00060267845,0.000087297136,0.000112339294],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013797898,0.00060045434,0.0010422086,0.00032551252,0.00003007214,0.000015228391,0.00048584072,0.0016638748,0.00006503979],"category_scores_gemma":[0.00012617877,0.00062493444,0.0003289502,0.00012914113,0.00016459098,0.0000050081494,0.00022259746,0.0005309467,0.000010487647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00064230605,0.000035733192,0.000024254356,0.00008267096,0.00016445343,0.00006823307,0.000022236713,0.000022856764,0.9622144,0.014384201,0.000008193355,0.022330454],"study_design_scores_gemma":[0.0006251147,0.00040834286,0.0000196069,0.00007191579,0.0000587271,0.000032120886,0.000009624531,0.00008178283,0.96713835,0.024366392,0.0066423165,0.0005457311],"about_ca_topic_score_codex":0.000041196807,"about_ca_topic_score_gemma":0.000021964604,"teacher_disagreement_score":0.06561322,"about_ca_system_score_codex":0.000052560223,"about_ca_system_score_gemma":0.00015876068,"threshold_uncertainty_score":0.9996322},"labels":[],"label_agreement":null},{"id":"W3045321207","doi":"10.1007/978-1-0716-0524-0_8","title":"Expression and Purification of an Intrinsically Disordered Protein","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Intrinsically disordered proteins; Tandem affinity purification; Fusion protein; Biochemistry; Protease; Function (biology); Ubiquitin; Biology; Chemistry; Affinity chromatography; Arabidopsis; Computational biology; Molecular biology; Gene; Cell biology; Recombinant DNA; Enzyme","score_opus":0.020145796425379284,"score_gpt":0.34362127362657374,"score_spread":0.32347547720119446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045321207","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.47286874,0.00008124264,0.52667654,0.00015640681,0.000031175183,0.000103930004,0.0000015842891,0.000010846231,0.00006952856],"genre_scores_gemma":[0.33713496,0.0000027443564,0.6627237,0.00009734781,0.000016257902,0.000013948789,0.000005159441,0.0000041130197,0.000001724916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998746,0.00072819466,0.00017147372,0.00023200823,0.000035626577,0.000086711225],"domain_scores_gemma":[0.99971145,0.000030415044,0.00006890997,0.00012996473,0.000022259743,0.000037020087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038478404,0.00006142577,0.00013864393,0.000033551987,0.000015430345,0.0000056906306,0.00009075894,0.00009356213,0.00003643783],"category_scores_gemma":[0.00037322,0.000049855218,0.000013418479,0.00009737347,0.00008005169,0.0000350071,0.000049167997,0.00006660086,0.0000010397952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004973986,0.000010868105,0.00010185314,0.000014626133,8.008587e-7,9.541491e-7,0.00015899279,0.0000066093357,0.97501546,0.0027372164,0.0000011126289,0.02190178],"study_design_scores_gemma":[0.00019786124,0.00021460168,0.00039394302,0.000005394463,0.0000025163774,0.0000010488392,0.00003116232,0.00020719705,0.98824173,0.010288008,0.00036259176,0.000053953452],"about_ca_topic_score_codex":0.000012294797,"about_ca_topic_score_gemma":0.000002016327,"teacher_disagreement_score":0.13604718,"about_ca_system_score_codex":0.000003666506,"about_ca_system_score_gemma":0.000010259822,"threshold_uncertainty_score":0.20330368},"labels":[],"label_agreement":null},{"id":"W3045469528","doi":"10.1007/978-1-0716-0524-0_16","title":"Determination of pKa Values in Intrinsically Disordered Proteins","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Toronto","funders":"","keywords":"Side chain; Histidine; Intrinsically disordered proteins; Chemistry; Nuclear magnetic resonance spectroscopy; Residue (chemistry); Peptide; Crystallography; Chemical physics; Polymer; Stereochemistry; Amino acid; Biochemistry; Organic chemistry","score_opus":0.012799868164912813,"score_gpt":0.3482744730585956,"score_spread":0.3354746048936828,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3045469528","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19977833,0.00044870537,0.7988529,0.00026140947,0.00004292745,0.0003236553,0.000006758951,0.000006387376,0.0002789138],"genre_scores_gemma":[0.319743,0.000047036985,0.67971385,0.00035856728,0.000031870422,0.000041443218,0.000043108168,0.00001439291,0.0000067342435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983038,0.00069067674,0.00035817912,0.00038136885,0.00005490332,0.00021112201],"domain_scores_gemma":[0.99952817,0.000030333456,0.00010837526,0.0002402203,0.000045868936,0.000047010577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00041914225,0.00014691427,0.00027474322,0.00008701639,0.00001148453,0.0000041538187,0.00024518522,0.0002808042,0.00000591021],"category_scores_gemma":[0.0010252366,0.00014151148,0.00007486719,0.00023659728,0.000123838,0.000002257372,0.00017975124,0.00015356179,6.45935e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009412156,0.000030900283,0.0039052914,0.000027172664,0.0000084212115,0.0000074192603,0.000084522195,0.000055225442,0.94410104,0.0011931345,0.0000016053637,0.050491136],"study_design_scores_gemma":[0.0008313045,0.0006346175,0.001991775,0.000012899001,0.000007747028,0.000004867908,0.000034916276,0.0018272973,0.9756719,0.017846752,0.0009217862,0.00021414828],"about_ca_topic_score_codex":0.000022806826,"about_ca_topic_score_gemma":0.000031737305,"teacher_disagreement_score":0.11996467,"about_ca_system_score_codex":0.000010991929,"about_ca_system_score_gemma":0.00005340752,"threshold_uncertainty_score":0.5770671},"labels":[],"label_agreement":null},{"id":"W3047433862","doi":"10.1007/978-1-0716-0916-3_3","title":"Identification of Endothelial Cells and Their Progenitors","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Identification (biology); Progenitor cell; Cell biology; Computational biology; Biology; Stem cell; Botany","score_opus":0.033889640585460505,"score_gpt":0.40538590906363425,"score_spread":0.37149626847817374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3047433862","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000053859538,0.8208393,0.17821881,0.000006869729,0.00023876758,0.00040639433,0.00019299901,0.000004798061,0.000038218797],"genre_scores_gemma":[0.00003728447,0.9513074,0.048116736,0.000038166276,0.00016309557,0.00013446347,0.00011531607,0.000051441726,0.000036072917],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99727553,0.0011606641,0.0006838479,0.00062582304,0.000040326668,0.0002137821],"domain_scores_gemma":[0.9990447,0.00006230983,0.00040015607,0.0003933293,0.000042671865,0.000056836216],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006565884,0.0003340655,0.001021845,0.00011523309,0.000020100893,0.000008299965,0.00030860183,0.000592086,0.0000053298168],"category_scores_gemma":[0.00014503837,0.0002624525,0.0003904048,0.00018331342,0.00018594111,0.0000010062558,0.0002215866,0.00014884175,0.000002149267],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000061945375,0.000013404455,0.000005979602,0.00065712363,0.00009739403,0.0000016029093,0.000010728336,3.461623e-7,0.4700047,0.00009585227,0.000010651427,0.529096],"study_design_scores_gemma":[0.00008746024,0.00009152587,4.2540168e-7,0.00012721524,0.00008031375,0.000011383252,0.000008036751,0.0000041261205,0.33845288,0.000117593794,0.660842,0.00017704749],"about_ca_topic_score_codex":0.0000058595006,"about_ca_topic_score_gemma":0.0000013967395,"teacher_disagreement_score":0.66083133,"about_ca_system_score_codex":0.000017137385,"about_ca_system_score_gemma":0.0001494725,"threshold_uncertainty_score":0.9999828},"labels":[],"label_agreement":null},{"id":"W3049086270","doi":"10.1007/978-1-0716-0783-1_30","title":"Protocol for Cryopreservation of Endothelial Monolayers","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Cryoprotectant; Cryopreservation; Dimethyl sulfoxide; Transplantation; Umbilical vein; Chemistry; Hydroxyethyl starch; Monolayer; Cell biology; Biomedical engineering; Andrology; Biology; Surgery; Biochemistry; Medicine; Embryo; In vitro","score_opus":0.12679340010586296,"score_gpt":0.4896675619875718,"score_spread":0.36287416188170885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049086270","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013257658,0.000009715675,0.9297321,0.000771183,0.00003473445,0.055661503,0.000011277646,0.000017147095,0.00050471793],"genre_scores_gemma":[0.010868261,6.427708e-7,0.897299,0.0007566593,0.000035864618,0.09098946,0.000016111757,0.000012802692,0.000021212414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992337,0.00023639823,0.00021309931,0.00017011815,0.0000315278,0.000115160845],"domain_scores_gemma":[0.9995874,0.000158425,0.00006558304,0.00010892744,0.00003672493,0.000042900836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027535984,0.000072159666,0.00024389329,0.00004594864,0.000008489611,0.0000010851168,0.000045011675,0.00008379483,0.000031148633],"category_scores_gemma":[0.0006809067,0.000058772934,0.00008567859,0.00012730427,0.000029427385,0.000010143569,0.000024519482,0.00005857962,0.0000010309509],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011987729,0.00009806715,0.03340708,0.00010735265,0.000047916288,0.000011944602,0.000066945744,0.000010200075,0.9226805,0.0011275203,0.0000208613,0.04122285],"study_design_scores_gemma":[0.0034507085,0.0010219853,0.0023149021,0.000022654473,0.000026575377,0.0000029315074,0.000010919348,0.0010507565,0.9696388,0.0048105987,0.017581984,0.0000671533],"about_ca_topic_score_codex":0.00001738475,"about_ca_topic_score_gemma":6.469467e-7,"teacher_disagreement_score":0.046958346,"about_ca_system_score_codex":0.0000136598,"about_ca_system_score_gemma":0.000035454676,"threshold_uncertainty_score":0.23966907},"labels":[],"label_agreement":null},{"id":"W3049108194","doi":"10.1007/978-1-0716-0783-1_4","title":"Mathematical Modeling and Optimization of Cryopreservation in Single Cells","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Cryobiology; Scope (computer science); Computer science; Cryopreservation; Mathematical model; Biological system; Mass transport; Biochemical engineering; Statistical physics; Mathematics; Engineering; Physics; Biology","score_opus":0.07962262294050532,"score_gpt":0.3808952788062715,"score_spread":0.3012726558657662,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049108194","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00067193806,0.00092668267,0.97168034,0.00027551595,0.000042921463,0.0003782206,0.0000043622044,0.000009569127,0.02601045],"genre_scores_gemma":[0.0017865669,0.00007734999,0.99626505,0.00015578172,0.000028502662,0.000009407235,0.00006266748,0.000022283899,0.0015923609],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9986405,0.00028588227,0.00048600076,0.00043866996,0.000045068384,0.000103912964],"domain_scores_gemma":[0.999385,0.00011531042,0.00011891474,0.00026084564,0.00008729451,0.000032619988],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084888417,0.0001539064,0.0006018809,0.00016105593,0.000006924182,0.0000014992503,0.000058597558,0.00055904913,0.00010972513],"category_scores_gemma":[0.0009338131,0.0001387993,0.00005798444,0.000047564994,0.0001660208,0.000012364035,0.0000829075,0.00032727985,0.0000021638864],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001909745,0.00017270628,0.00030437278,0.00067528227,0.00012468945,0.000051804753,0.00022311215,0.009183745,0.93640924,0.040572267,0.000005876485,0.010367177],"study_design_scores_gemma":[0.0018222487,0.0015043124,0.00014644819,0.0005976309,0.00022776966,0.000037160673,0.00002717699,0.36161318,0.12634303,0.5060776,0.0010497299,0.00055373536],"about_ca_topic_score_codex":0.000004523553,"about_ca_topic_score_gemma":5.9823185e-7,"teacher_disagreement_score":0.8100662,"about_ca_system_score_codex":0.000033996446,"about_ca_system_score_gemma":0.000031073156,"threshold_uncertainty_score":0.5660071},"labels":[],"label_agreement":null},{"id":"W3049502682","doi":"10.1007/978-1-0716-0783-1_11","title":"Osmometric Measurements of Cryoprotective Agent Permeation into Tissues","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Permeation; Cryopreservation; Tissue sample; Osmometer; Chromatography; Chemistry; Membrane; Biomedical engineering; Biochemistry; Biology; Medicine","score_opus":0.11298366520629476,"score_gpt":0.44797186176755505,"score_spread":0.3349881965612603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049502682","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20125625,0.0027035954,0.7931767,0.001248545,0.00012351721,0.00056277326,0.0000015517578,0.000021728427,0.00090533576],"genre_scores_gemma":[0.49685043,0.000018153942,0.5025545,0.00047188828,0.000036886704,0.00003375075,0.000012257426,0.000007698796,0.000014488297],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99770695,0.0013173695,0.0003156845,0.00043160332,0.00008078256,0.00014762128],"domain_scores_gemma":[0.99931955,0.00006622001,0.00010041264,0.00024819004,0.00020531974,0.000060288534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013867719,0.000113024915,0.0003918536,0.00018910115,0.000019146037,0.0000012417983,0.00009185525,0.00018407252,0.00006815867],"category_scores_gemma":[0.0060885204,0.00009385364,0.00007901336,0.0006281328,0.00018224392,0.000014423126,0.00006317172,0.00019816893,0.000007680406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073113834,0.000080152764,0.06851948,0.000051974443,0.00007373195,0.0000063511466,0.00044998172,0.0000026088612,0.8872821,0.00006187716,0.0000075418184,0.04273309],"study_design_scores_gemma":[0.00055003766,0.00082800613,0.12657711,0.000011176823,0.000035726684,0.000003947076,0.0000452476,0.000054265216,0.86899185,0.0021708866,0.00065477024,0.00007698413],"about_ca_topic_score_codex":0.000052499865,"about_ca_topic_score_gemma":9.051178e-7,"teacher_disagreement_score":0.2955942,"about_ca_system_score_codex":0.000059402468,"about_ca_system_score_gemma":0.00003885832,"threshold_uncertainty_score":0.7288968},"labels":[],"label_agreement":null},{"id":"W3049729609","doi":"10.1007/978-1-0716-0783-1_9","title":"Use of Ice Recrystallization Inhibition Assays to Screen for Compounds That Inhibit Ice Recrystallization","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Recrystallization (geology); Antifreeze protein; Analyte; Ice crystals; Antifreeze; Chemistry; Chromatography; Materials science; Biochemistry; Biology; Physics; Organic chemistry","score_opus":0.09530408848760727,"score_gpt":0.33947659121902124,"score_spread":0.24417250273141397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3049729609","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014364434,0.000044826855,0.9859054,0.00048249526,0.00006769094,0.0010347167,0.00023495694,0.000041110572,0.010752327],"genre_scores_gemma":[0.017297,0.00008408503,0.9754239,0.0018854978,0.000054040687,0.00010427423,0.0018910203,0.000057472356,0.0032027347],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99795467,0.00033752597,0.00055264746,0.0007362603,0.00017221374,0.000246702],"domain_scores_gemma":[0.9986977,0.0005271057,0.0003299029,0.00026988014,0.000053672367,0.00012175751],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004694305,0.0003164879,0.00051928504,0.000105070045,0.00005435516,0.000017034341,0.00021457017,0.00058513286,0.0002036579],"category_scores_gemma":[0.00062128966,0.00028893744,0.00017107322,0.00020778933,0.00023745502,0.00007760281,0.0003582103,0.00024633852,0.00001770481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009127266,0.000038728336,0.000043542703,0.000030027048,0.00002032469,0.000002550244,0.000031978812,0.0010672132,0.97494864,0.01832036,0.00028742306,0.0051179347],"study_design_scores_gemma":[0.0005450802,0.0009099305,0.00020854367,0.00024174635,0.00010839456,0.0000037460861,0.000013364037,0.0027761953,0.532713,0.34432182,0.117233776,0.0009244435],"about_ca_topic_score_codex":0.00006858611,"about_ca_topic_score_gemma":0.000042380016,"teacher_disagreement_score":0.44223568,"about_ca_system_score_codex":0.00015616571,"about_ca_system_score_gemma":0.00001683458,"threshold_uncertainty_score":0.99995625},"labels":[],"label_agreement":null},{"id":"W3051578728","doi":"10.1007/978-1-0716-0802-9_16","title":"The Measurement of Whole-Body Glucose Homeostasis in Mice","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Homeostasis; Glucose homeostasis; Adipose tissue; Immune system; Biology; Metabolic regulation; Metabolic syndrome; Skeletal muscle; Endocrinology; Internal medicine; Insulin; Insulin resistance; Diabetes mellitus; Metabolism; Immunology; Medicine","score_opus":0.03912721843628616,"score_gpt":0.3664874946129842,"score_spread":0.32736027617669805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3051578728","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41377217,0.053624965,0.518453,0.00997355,0.0004013669,0.0013083831,0.000024525041,0.000052909887,0.0023891493],"genre_scores_gemma":[0.5674747,0.002120249,0.42646784,0.0034585616,0.00019855039,0.00015158027,0.000045198416,0.000046548506,0.000036733032],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981885,0.0007685338,0.00044271423,0.00023322855,0.0001470332,0.00022001953],"domain_scores_gemma":[0.9992988,0.00015238937,0.000107797394,0.00023105157,0.00011998233,0.00008999533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014471543,0.00012177158,0.00036954842,0.000099817764,0.000021719334,0.0000038502617,0.00015289853,0.000091181886,0.000016145677],"category_scores_gemma":[0.0024998612,0.00008617766,0.00009323563,0.0003794243,0.00013719658,0.000014470503,0.000053984142,0.00014097556,0.000004349793],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029270153,0.00007423758,0.0026132914,0.00006303958,0.00006042325,0.000024127543,0.0002950616,0.000024600831,0.87930983,0.0022372953,0.000045129815,0.11496023],"study_design_scores_gemma":[0.0028049415,0.00030054155,0.021030962,0.00007420785,0.00015555361,0.000007042344,0.00037408338,0.00055482786,0.84538126,0.003064774,0.12606156,0.00019024154],"about_ca_topic_score_codex":0.000050578743,"about_ca_topic_score_gemma":0.00001939988,"teacher_disagreement_score":0.15370256,"about_ca_system_score_codex":0.0000339939,"about_ca_system_score_gemma":0.00012991091,"threshold_uncertainty_score":0.35142228},"labels":[],"label_agreement":null},{"id":"W30535458","doi":"10.1007/978-1-59745-407-0_3","title":"Transient Expression of Antibodies in Plants Using Syringe Agroinfiltration","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":50,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Medicago (Canada)","funders":"","keywords":"Agroinfiltration; Transient (computer programming); Syringe; Chemistry; Computer science; Engineering; Biochemistry; Mechanical engineering; Gene expression","score_opus":0.030795100304452726,"score_gpt":0.3924763663942621,"score_spread":0.3616812660898094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W30535458","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5802856,0.00048633196,0.4188627,0.000025354058,0.00002456688,0.00010585518,0.000012744858,0.0000029718797,0.00019387003],"genre_scores_gemma":[0.72054476,0.00014002083,0.2791678,0.00006733508,0.000012206608,0.0000054766065,0.000053574196,0.0000051300694,0.000003707806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99894345,0.00026069078,0.00029512608,0.00027372304,0.000039991446,0.00018704768],"domain_scores_gemma":[0.99966544,0.000018107348,0.00006770537,0.00020814179,0.000015076261,0.000025520298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00035242585,0.000111665126,0.0001929889,0.00010629613,0.000017581915,0.0000030166939,0.00013007839,0.00017270107,0.0000034893337],"category_scores_gemma":[0.00003462673,0.0001047973,0.000053711035,0.00010178957,0.000052005526,0.000002319613,0.000016490734,0.000081821185,2.254277e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041887615,0.000075077405,0.0017507802,0.0000063626667,0.0000043366267,0.0000030433225,0.000059406277,0.00046553955,0.99257123,0.0002543651,0.0000032018165,0.0047647506],"study_design_scores_gemma":[0.00038395944,0.000111126035,0.011074888,0.000029570589,0.0000043787118,0.000011139917,0.000029375682,0.00021903185,0.9867118,0.0009098271,0.0004002889,0.00011463327],"about_ca_topic_score_codex":0.000022643098,"about_ca_topic_score_gemma":0.000021932881,"teacher_disagreement_score":0.14025915,"about_ca_system_score_codex":0.000008305104,"about_ca_system_score_gemma":0.000026299414,"threshold_uncertainty_score":0.427351},"labels":[],"label_agreement":null},{"id":"W3065170598","doi":"10.1007/978-1-0716-0802-9_19","title":"Isolation and Preparation of Bone Marrow-Derived Immune Cells for Metabolic Analysis","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Immune system; Bone marrow; Isolation (microbiology); Biology; Immunology; Cell biology; Microbiology","score_opus":0.01608924888270522,"score_gpt":0.3318431209736655,"score_spread":0.31575387209096023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3065170598","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00352633,0.029498864,0.9619128,0.00014964382,0.00031874285,0.0008673493,0.000060692102,0.000027418806,0.0036381264],"genre_scores_gemma":[0.056741882,0.004288085,0.9001032,0.00032161296,0.00007956334,0.0002764971,0.005062673,0.00015695037,0.03296951],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975453,0.0008775809,0.0008907245,0.00046467024,0.000022347598,0.00019936023],"domain_scores_gemma":[0.99849564,0.00038477257,0.0006474752,0.0003452039,0.00011328382,0.000013642566],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010994131,0.0002933508,0.0012012549,0.0006542785,0.000047747646,0.0000061027818,0.00012777546,0.000945405,0.00013506819],"category_scores_gemma":[0.0002322106,0.0002907076,0.00037566095,0.000130745,0.00020900002,0.00003346514,0.00009834972,0.00027594873,0.0000107430715],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00057707715,0.000011093386,0.000010835734,0.00004600532,0.001332779,0.0000013395218,0.00016734967,0.00002768039,0.9550035,0.03446158,0.000010868527,0.0083498685],"study_design_scores_gemma":[0.0007893517,0.0003257403,0.00010613213,0.000023128647,0.0012508568,0.0000053763965,0.000014120127,0.00022314236,0.957112,0.0112436125,0.028637508,0.00026899923],"about_ca_topic_score_codex":0.000023231469,"about_ca_topic_score_gemma":0.0000068578497,"teacher_disagreement_score":0.061809607,"about_ca_system_score_codex":0.000021223088,"about_ca_system_score_gemma":0.00005429415,"threshold_uncertainty_score":0.9999545},"labels":[],"label_agreement":null},{"id":"W30694091","doi":"10.1007/978-1-4939-2428-8_6","title":"Longitudinal Studies 3: Data Modeling Using Standard Regression Models and Extensions","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Statistical Methods and Bayesian Inference","field":"Mathematics","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; Foothills Medical Centre; University of Calgary","funders":"","keywords":"Longitudinal data; Outcome (game theory); Generalized linear model; Linear regression; Regression analysis; Statistics; Linear model; Generalized linear mixed model; Econometrics; Mixed model; Computer science; Mathematics; Data mining","score_opus":0.5966843994995419,"score_gpt":0.6003483513581748,"score_spread":0.0036639518586328856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W30694091","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005291277,0.0059521757,0.9881417,0.00010787327,0.00019632063,0.00014820741,0.000033186054,0.00002733087,0.00010188349],"genre_scores_gemma":[0.0043086926,0.00029135495,0.99527395,0.00006428498,0.000026274467,0.000007099547,0.0000054848897,0.000020068323,0.0000027666733],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9968118,0.0018229029,0.00040853364,0.000543191,0.00012183508,0.0002917227],"domain_scores_gemma":[0.99773633,0.0011990279,0.00009539355,0.00066334364,0.00019317577,0.00011270773],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.004203206,0.0001901086,0.0005712757,0.000121488716,0.00006553957,0.000017678396,0.0002569484,0.0001476207,0.00000408261],"category_scores_gemma":[0.008858702,0.0001402266,0.000025338622,0.0001502,0.0002001971,0.000094887306,0.0007722312,0.00023285193,3.1450494e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013164863,0.000059900467,0.00036139056,0.00012356805,0.00009238417,0.00013558537,0.000549623,0.0008177915,0.021916097,0.8329962,0.000060508173,0.14275533],"study_design_scores_gemma":[0.00020467432,0.00004878817,0.0000010213404,0.00008378249,0.0000361006,0.00002432347,0.00014202969,0.38523307,0.00049931253,0.6135972,0.00002182689,0.00010785736],"about_ca_topic_score_codex":0.000023325798,"about_ca_topic_score_gemma":0.000006238512,"teacher_disagreement_score":0.3844153,"about_ca_system_score_codex":0.000051085808,"about_ca_system_score_gemma":0.000071806746,"threshold_uncertainty_score":0.9994901},"labels":[],"label_agreement":null},{"id":"W3069608340","doi":"10.1007/978-1-0716-0802-9_1","title":"Single-Cell Transcriptomics of Immune Cells: Cell Isolation and cDNA Library Generation for scRNA-Seq","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"cDNA library; Biology; Complementary DNA; Transcriptome; Computational biology; RNA; RNA-Seq; Immune system; Cell; Genomic library; Molecular biology; Gene; Genetics; Gene expression","score_opus":0.03364003874489182,"score_gpt":0.2948125065264306,"score_spread":0.2611724677815388,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3069608340","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33564916,0.00266726,0.66070414,0.00020165528,0.00018282929,0.0003119599,0.00004048228,0.000011752228,0.0002307911],"genre_scores_gemma":[0.43864438,0.00030342222,0.5599029,0.000653936,0.00011665497,0.000022497892,0.00026765544,0.000043858214,0.000044700457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820554,0.0004311923,0.00052625174,0.0005297656,0.000048384885,0.00025886192],"domain_scores_gemma":[0.9994311,0.000041888437,0.00016074751,0.00023517515,0.00004759532,0.00008353921],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034749636,0.0002275729,0.00034948232,0.000077392426,0.000041857296,0.000019116633,0.00020439975,0.00038356544,0.000008600488],"category_scores_gemma":[0.00007032005,0.00023949808,0.0001632027,0.00014275017,0.0001221507,0.000009422706,0.000060202496,0.00013432489,4.650411e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021940438,0.000120516284,0.0006198729,0.00011543384,0.00002162956,0.0000011684151,0.00016407247,0.00017874103,0.99315584,0.00015778972,0.00005148229,0.005194049],"study_design_scores_gemma":[0.0013392261,0.0009113408,0.000028031634,0.000006623346,0.000036037854,0.0000016328237,0.00004033611,0.007815001,0.9848249,0.0003213334,0.004432398,0.00024316604],"about_ca_topic_score_codex":0.000011426074,"about_ca_topic_score_gemma":0.0000031332704,"teacher_disagreement_score":0.102995224,"about_ca_system_score_codex":0.0000077378445,"about_ca_system_score_gemma":0.00005551113,"threshold_uncertainty_score":0.9766449},"labels":[],"label_agreement":null},{"id":"W3069700431","doi":"10.1007/978-1-0716-0802-9_18","title":"Sex Differences in Immunometabolism: An Unexplored Area","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Immune system; Disease; Biology; Cell metabolism; Medicine; Immunology; Cell; Pathology","score_opus":0.08466285784582434,"score_gpt":0.40583850434301644,"score_spread":0.3211756464971921,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3069700431","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000027949303,0.93543893,0.059454735,0.000032024,0.0037422664,0.000556519,0.000012398782,0.000065393986,0.00066979567],"genre_scores_gemma":[0.000015713806,0.97866064,0.01919352,0.00017808318,0.000034357065,0.00028073182,0.00090266473,0.000060257327,0.00067404273],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9883833,0.008951765,0.001174086,0.0009147812,0.00002505316,0.0005510327],"domain_scores_gemma":[0.9984671,0.00045905745,0.0004094061,0.00059846137,0.000033288718,0.000032669042],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0010594579,0.0006194911,0.0029657523,0.0008401696,0.00005598085,0.000022369068,0.0006732231,0.0013909824,0.00076085475],"category_scores_gemma":[0.0004641842,0.0005103275,0.0004411252,0.000699383,0.00022874057,0.00007280932,0.00022486867,0.0016783923,0.00023515828],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045958164,0.0001395107,0.000037688635,0.00033115913,0.00022928485,0.000031024298,0.0002043799,2.4690002e-7,0.030123996,0.0009281749,0.000049333055,0.96787924],"study_design_scores_gemma":[0.00051974173,0.00025042033,0.00001863189,0.00059167383,0.00015514363,0.000090754365,0.00015790839,0.0000058242094,0.0017150196,0.0004906939,0.9955025,0.0005017075],"about_ca_topic_score_codex":0.00014046626,"about_ca_topic_score_gemma":0.000012447236,"teacher_disagreement_score":0.9954531,"about_ca_system_score_codex":0.0001224751,"about_ca_system_score_gemma":0.00016072404,"threshold_uncertainty_score":0.9999054},"labels":[],"label_agreement":null},{"id":"W3076809850","doi":"10.1007/978-1-0716-0802-9_10","title":"A Gene Expression Analysis of M1 and M2 Polarized Macrophages","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Gene expression; Gene; Molecular biology; Biology; Genetics","score_opus":0.0195640214258252,"score_gpt":0.359088881933204,"score_spread":0.3395248605073788,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3076809850","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24202481,0.026138114,0.73085356,0.00028997447,0.00026815236,0.00017741328,0.00003342286,0.000027264392,0.00018726842],"genre_scores_gemma":[0.39578837,0.00032366224,0.602867,0.00080896606,0.000010743572,0.000021587055,0.000085036045,0.000019030738,0.00007561907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969733,0.0019495748,0.00038557983,0.00041404448,0.00001692588,0.0002605912],"domain_scores_gemma":[0.99922085,0.00027818052,0.00015199558,0.00029181835,0.000036470712,0.000020668851],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061171525,0.00016165801,0.0006630199,0.00026501587,0.00003326183,0.0000032816274,0.00023662375,0.000367432,0.00034280826],"category_scores_gemma":[0.00038876923,0.0001431163,0.00014001333,0.00060934277,0.0003353127,0.000015246667,0.00026193855,0.00027860302,0.0000064716214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015142602,0.000026211974,0.006016361,0.000015035864,0.00057232514,0.000009352755,0.0003791821,0.000018583169,0.9866405,0.00020097391,0.000016412248,0.0059535936],"study_design_scores_gemma":[0.00087438466,0.00012918701,0.0014238231,0.000006605904,0.0002735199,0.0000045734205,0.00005165804,0.000059313716,0.9950361,0.00034535464,0.0016601123,0.00013532054],"about_ca_topic_score_codex":0.0000657032,"about_ca_topic_score_gemma":0.0000024112042,"teacher_disagreement_score":0.15376356,"about_ca_system_score_codex":0.000015338353,"about_ca_system_score_gemma":0.000024817147,"threshold_uncertainty_score":0.5836113},"labels":[],"label_agreement":null},{"id":"W3076896124","doi":"10.1007/978-1-0716-0802-9_9","title":"Studying Adipocyte and Immune Cell Cross Talk Using a Co-culture System","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Immune system; Adipose tissue; Cell biology; Adipocyte; Biology; Cell culture; Paracrine signalling; Cell type; CD8; 3T3-L1; Lipopolysaccharide; T cell; Immunology; Cell; Endocrinology; Receptor; Biochemistry","score_opus":0.03496822993389045,"score_gpt":0.3780008853037251,"score_spread":0.3430326553698347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3076896124","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011797342,0.14666125,0.5318937,0.00011321167,0.0013040057,0.0033844842,0.00024954657,0.00032298543,0.3042735],"genre_scores_gemma":[0.011356795,0.0015290326,0.93924296,0.0010755786,0.0010990098,0.000101383186,0.0006941999,0.00034828432,0.04455274],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99767214,0.00041148084,0.0007453548,0.00069833593,0.000152508,0.00032017438],"domain_scores_gemma":[0.998736,0.000094569776,0.0003813458,0.00044658518,0.00013908526,0.00020238996],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00069514726,0.0004935824,0.0012983861,0.00024238901,0.00009373247,0.000029285016,0.00016354561,0.0006893675,0.000053875116],"category_scores_gemma":[0.00023280973,0.00042978156,0.00025144443,0.00007666842,0.00029332572,0.000029626774,0.00014593938,0.0005377883,0.000008857353],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00048308328,0.00006984039,0.000861352,0.0032031152,0.000879074,0.0019404409,0.00086273026,0.000048550224,0.9175226,0.05838703,0.000030726642,0.01571146],"study_design_scores_gemma":[0.013438781,0.0013938558,0.0013968218,0.0038658916,0.006539028,0.0021232779,0.00080410985,0.00228257,0.22158815,0.012100892,0.7309626,0.0035040528],"about_ca_topic_score_codex":0.00003715039,"about_ca_topic_score_gemma":0.0000015605365,"teacher_disagreement_score":0.7309318,"about_ca_system_score_codex":0.000111130794,"about_ca_system_score_gemma":0.00016812999,"threshold_uncertainty_score":0.9998154},"labels":[],"label_agreement":null},{"id":"W3080427797","doi":"10.1007/978-1-0716-0826-5_3","title":"Siamese Neural Networks: An Overview","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neural Networks and Applications","field":"Computer Science","cited_by":670,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Krembil Foundation","funders":"","keywords":"Artificial neural network; Computer science; Similarity (geometry); Artificial intelligence; Perceptron; Curse of dimensionality; Representation (politics); Pattern recognition (psychology); Rank (graph theory); Feedforward neural network; Cosine similarity; Euclidean distance; Machine learning; Pearson product-moment correlation coefficient; Convolutional neural network; Mathematics; Statistics","score_opus":0.12986869723055464,"score_gpt":0.49266200524932324,"score_spread":0.36279330801876863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3080427797","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[1.755385e-8,0.50156593,0.49769104,0.00012390349,0.00020735894,0.0003016229,0.0000021037388,0.0000624563,0.000045565946],"genre_scores_gemma":[9.0943956e-8,0.5523244,0.44673643,0.0006316359,0.00010406804,0.00014811318,0.000026785132,0.000022511937,0.000005919512],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99373585,0.0039299964,0.0006733172,0.0010989867,0.00007373752,0.000488085],"domain_scores_gemma":[0.99786776,0.00039689348,0.0002864514,0.0012501996,0.000024790144,0.00017392663],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00079997623,0.00045013984,0.0015806722,0.00014311596,0.000053941065,0.00008409323,0.0023527355,0.00044215872,0.000010797946],"category_scores_gemma":[0.00007871651,0.00036452446,0.0004147027,0.0014116409,0.000081311286,0.00007663023,0.0008029599,0.0007969111,0.000012948223],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[3.035263e-7,0.000019437499,3.7334883e-7,0.00023274198,0.000017784132,0.000054135777,0.000005600004,0.00011309594,0.0000109888915,0.058324665,0.00003087383,0.94119],"study_design_scores_gemma":[0.000053653705,0.00007639799,2.8114246e-7,0.00028734977,0.000047095295,0.000058409274,4.6258066e-7,0.06632705,0.0000025884588,0.006605817,0.926191,0.0003498974],"about_ca_topic_score_codex":0.000009488236,"about_ca_topic_score_gemma":0.0000027706785,"teacher_disagreement_score":0.9408401,"about_ca_system_score_codex":0.000043247266,"about_ca_system_score_gemma":0.00007677578,"threshold_uncertainty_score":0.9998807},"labels":[],"label_agreement":null},{"id":"W3081341272","doi":"10.1007/978-1-0716-0664-3_8","title":"Profiling Chromatin Landscape at High Resolution and Throughput with 2C-ChIP","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Chromatin immunoprecipitation; Chip; Computational biology; DNA sequencing; Chromatin; Chromosome conformation capture; Genome; ChIP-sequencing; Profiling (computer programming); Computer science; Throughput; Biology; Genetics; DNA; Gene; Chromatin remodeling; Gene expression; Telecommunications","score_opus":0.013024550037828398,"score_gpt":0.30394878198196035,"score_spread":0.290924231944132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081341272","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.648545,0.0009122517,0.34954387,0.0003427466,0.000039336075,0.00017640599,0.000012264467,0.000012376549,0.000415722],"genre_scores_gemma":[0.36331782,0.000112751535,0.63563466,0.00062510464,0.00006197967,0.000025265195,0.00016821924,0.000027960576,0.000026262838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845964,0.00040408707,0.00024601843,0.0005463826,0.000053279367,0.00029061773],"domain_scores_gemma":[0.9994847,0.000027477072,0.00010387031,0.00026552757,0.000032757373,0.00008562753],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036510572,0.00020110668,0.00025660434,0.00003769714,0.000060729017,0.000013853296,0.00016202587,0.0002418397,0.000011211593],"category_scores_gemma":[0.00014489981,0.00017524634,0.000043050517,0.00012565119,0.00012618404,0.000002050416,0.0002834785,0.00013638474,0.0000030838019],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000110937384,0.000015894086,0.008387868,0.000032892516,0.000037375336,0.000011392709,0.00006532625,0.00046437673,0.98816824,0.0011993474,0.000024684981,0.0014816715],"study_design_scores_gemma":[0.0021120305,0.001549757,0.0037972438,0.000024340115,0.000046076908,0.00009995185,0.000118515956,0.014010314,0.97073525,0.0019191094,0.0049568634,0.0006305731],"about_ca_topic_score_codex":0.00001248568,"about_ca_topic_score_gemma":0.000025870575,"teacher_disagreement_score":0.28609076,"about_ca_system_score_codex":0.000017729506,"about_ca_system_score_gemma":0.000035638815,"threshold_uncertainty_score":0.7146338},"labels":[],"label_agreement":null},{"id":"W3081370688","doi":"10.1007/978-1-0716-0826-5_4","title":"Computational Methods for Elucidating Gene Expression Regulation in Bacteria","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Gene; Promoter; Biology; Computational biology; Regulation of gene expression; Gene expression; Genetics; Bacteria; Transcription (linguistics)","score_opus":0.028066326305872826,"score_gpt":0.39399566942301634,"score_spread":0.36592934311714354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081370688","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11777884,0.00038535355,0.8805887,0.00062057906,0.00018090384,0.0003758133,0.000016044789,0.00001514171,0.00003860574],"genre_scores_gemma":[0.05554753,0.000034516772,0.94304776,0.00069373014,0.00012374613,0.00008758358,0.00042662313,0.000029787141,0.00000871053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99746644,0.0010404133,0.00047476412,0.0006546811,0.00003735076,0.0003263504],"domain_scores_gemma":[0.9993855,0.00009212165,0.0001462013,0.0002471371,0.00006471517,0.00006437345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010695325,0.00020158051,0.00031778982,0.000113785296,0.00003637003,0.000014716831,0.00026295707,0.000550235,0.000021588829],"category_scores_gemma":[0.0007861839,0.00020352892,0.00009282464,0.00022533479,0.00009287504,0.000002939184,0.0002352857,0.00015264162,0.0000011624919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001439924,0.000027586946,0.00039454005,0.000016068754,0.000013304219,0.0000012039399,0.00003404179,0.00094397675,0.95651865,0.000497378,0.000016057073,0.041393213],"study_design_scores_gemma":[0.000880537,0.00036006188,0.0009291933,0.000009156795,0.0000065149716,0.0000056882445,0.000015122072,0.0056823916,0.9778315,0.006548981,0.0075040194,0.00022685039],"about_ca_topic_score_codex":0.000006433898,"about_ca_topic_score_gemma":0.0000031064696,"teacher_disagreement_score":0.06245905,"about_ca_system_score_codex":0.000018629753,"about_ca_system_score_gemma":0.000053984233,"threshold_uncertainty_score":0.82996684},"labels":[],"label_agreement":null},{"id":"W3081505409","doi":"10.1007/978-1-0716-0664-3_14","title":"3D Immuno-DNA Fluorescence In Situ Hybridization (FISH) for Detection of HIV-1 and Cellular Genes in Primary CD4+ T Cells","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Provirus; Fluorescence in situ hybridization; Genome; Chromatin; Biology; Fluorescence microscope; DNA; In situ; Computational biology; Chromosome conformation capture; In situ hybridization; Interphase; Gene; Chromosome; Genetics; Fluorescence; Chemistry; Gene expression","score_opus":0.016808130479107262,"score_gpt":0.29662073744809603,"score_spread":0.27981260696898874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081505409","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041078568,0.05020954,0.8919172,0.0003585175,0.0009744587,0.004792027,0.00082527864,0.00006758349,0.009776774],"genre_scores_gemma":[0.1403399,0.013286755,0.81864846,0.0006141994,0.00013242103,0.0010317869,0.010478957,0.00039715608,0.015070362],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974377,0.00089333055,0.0006150648,0.0006471138,0.000033049553,0.00037375497],"domain_scores_gemma":[0.99904823,0.0003635632,0.00021002791,0.0002939819,0.000057199097,0.000026987866],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00078662427,0.00032489753,0.00079216674,0.00051874656,0.00003353347,0.000005416387,0.00020639808,0.0007861085,0.000031190717],"category_scores_gemma":[0.00014975351,0.00032294687,0.000115035684,0.00010085094,0.00032319938,0.00002399336,0.00018089049,0.0004924314,0.000019612155],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033690996,0.000056955596,0.00024766958,0.00014125687,0.00010117782,0.00005588888,0.00007387492,0.000006335643,0.93586946,0.0006955872,0.0000072631638,0.06240761],"study_design_scores_gemma":[0.0018278271,0.00050591683,0.00025752428,0.00009232825,0.00003876634,0.000013202277,0.000011190682,0.000016193233,0.9837209,0.0022744422,0.010986101,0.00025560256],"about_ca_topic_score_codex":0.00005479728,"about_ca_topic_score_gemma":0.000092363145,"teacher_disagreement_score":0.09926133,"about_ca_system_score_codex":0.00014552198,"about_ca_system_score_gemma":0.00010891167,"threshold_uncertainty_score":0.9999223},"labels":[],"label_agreement":null},{"id":"W3081716148","doi":"10.1007/978-1-0716-0771-8_3","title":"Knocking Down Long Noncoding RNAs Using Antisense Oligonucleotide Gapmers","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Biology; Long non-coding RNA; Oligonucleotide; Antisense RNA; Computational biology; Genetics; Non-coding RNA; RNA; DNA; Gene","score_opus":0.0766826410342234,"score_gpt":0.483689082659149,"score_spread":0.4070064416249256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081716148","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00001276693,0.5195464,0.47885883,0.000017624438,0.00044390283,0.00073674734,0.000029906314,0.000027201835,0.00032662175],"genre_scores_gemma":[0.000011011948,0.6997872,0.29900146,0.00019305816,0.00032146886,0.00009403761,0.00028362602,0.00025638205,0.000051755687],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99023175,0.0046478664,0.001345458,0.0021209102,0.0002874305,0.0013665644],"domain_scores_gemma":[0.9974123,0.00016964832,0.0006186306,0.0013079484,0.00013622665,0.00035523783],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019731356,0.0011047105,0.002545092,0.00074679643,0.00015114588,0.0000849527,0.0011747458,0.0019294476,0.000059074948],"category_scores_gemma":[0.0013381896,0.001133225,0.0011804699,0.001201717,0.00031817335,0.000006261054,0.0014227009,0.0015946192,0.00003111089],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031175085,0.00003367684,0.0000022699408,0.0013574617,0.00042792302,0.00063092913,0.000015932252,0.00011439872,0.37351337,0.00015807613,0.000027286522,0.6236875],"study_design_scores_gemma":[0.0006092339,0.0002807007,3.4801965e-7,0.0022494628,0.0004839546,0.0006477742,0.000018531948,0.00040904083,0.0996477,0.00014683534,0.89425564,0.0012507914],"about_ca_topic_score_codex":0.00008930383,"about_ca_topic_score_gemma":0.000022849548,"teacher_disagreement_score":0.89422834,"about_ca_system_score_codex":0.0003629534,"about_ca_system_score_gemma":0.0009806596,"threshold_uncertainty_score":0.9993663},"labels":[],"label_agreement":null},{"id":"W3081764663","doi":"10.1007/978-1-0716-0771-8_6","title":"Inotersen for the Treatment of Hereditary Transthyretin Amyloidosis","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Amyloidosis: Diagnosis, Treatment, Outcomes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Transthyretin; Amyloidosis; Polyneuropathy; Medicine; Cardiomyopathy; Internal medicine; Pharmacology; Heart failure","score_opus":0.053870694455135024,"score_gpt":0.4354566088334866,"score_spread":0.38158591437835154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081764663","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000028031063,0.8485102,0.14805278,0.00026823516,0.0004163169,0.002281389,0.00037507052,0.000015443895,0.000052547803],"genre_scores_gemma":[0.000014362213,0.82113385,0.17544632,0.00019192783,0.00022259513,0.0022135957,0.0006086797,0.00011334334,0.00005533873],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99542326,0.0018185927,0.0010407242,0.001078721,0.000097107935,0.0005416005],"domain_scores_gemma":[0.99732083,0.0010044902,0.0004915176,0.0010181463,0.00005897874,0.00010604182],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00055227784,0.00082586915,0.0023658983,0.00017711101,0.00006358431,0.000012374845,0.0007318652,0.0009891558,0.000020534504],"category_scores_gemma":[0.00036846302,0.0005452163,0.0017847387,0.00033046483,0.00033358205,0.0000018492677,0.00011928722,0.0001916621,0.0000051026186],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007100924,0.00028551926,0.00009496438,0.0009051291,0.0016271658,0.000025786514,0.00007140023,0.000005681486,0.005595891,0.00013554958,0.00014828265,0.9910336],"study_design_scores_gemma":[0.0009800505,0.0018382043,0.000007251912,0.0002694129,0.0015821531,0.000028611174,0.000038769067,0.000010642856,0.019325422,0.000117570125,0.9753402,0.00046171198],"about_ca_topic_score_codex":0.000062849744,"about_ca_topic_score_gemma":0.000019994868,"teacher_disagreement_score":0.9905719,"about_ca_system_score_codex":0.00012845725,"about_ca_system_score_gemma":0.0002582575,"threshold_uncertainty_score":0.99969995},"labels":[],"label_agreement":null},{"id":"W3081867836","doi":"10.1007/978-1-0716-0771-8_1","title":"Invention and Early History of Gapmers","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Biology; Oligonucleotide; Ribonuclease; Nucleotide; RNA; Genetics; Biochemistry; DNA; Gene","score_opus":0.045964003902814105,"score_gpt":0.42663927559603054,"score_spread":0.38067527169321647,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3081867836","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019486262,0.88769954,0.11156266,0.000009605608,0.00010617296,0.00022821655,0.000009735995,0.0000134865795,0.00035107016],"genre_scores_gemma":[0.000010299238,0.6907581,0.30894426,0.000043308748,0.000032048792,0.000018560195,0.0000727844,0.000027932236,0.00009268422],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971839,0.0013167134,0.0006044995,0.0006360554,0.00005284534,0.00020599426],"domain_scores_gemma":[0.9990563,0.00004207966,0.00042044118,0.0003768613,0.00004256943,0.0000617568],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006245545,0.00032507672,0.0012590869,0.000228359,0.000010052102,0.000003187024,0.00021307085,0.0006979246,0.0000013740091],"category_scores_gemma":[0.00033320268,0.00028456043,0.00040503615,0.00018890965,0.00032914605,0.0000012467652,0.00022206866,0.0002631696,4.5122593e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010208278,0.000018982713,0.000017377644,0.0008451354,0.00014065769,0.0000099206345,0.00000874409,4.9079784e-8,0.15232839,0.00020845929,0.00005840424,0.84635365],"study_design_scores_gemma":[0.00010080396,0.0002555717,0.0000014750486,0.00046193518,0.00024524707,0.000021076401,0.0000035391847,0.0000020298307,0.012736849,0.0005370467,0.9853512,0.00028321694],"about_ca_topic_score_codex":0.00001819699,"about_ca_topic_score_gemma":0.0000029834453,"teacher_disagreement_score":0.9852928,"about_ca_system_score_codex":0.00007570486,"about_ca_system_score_gemma":0.00016358652,"threshold_uncertainty_score":0.99996066},"labels":[],"label_agreement":null},{"id":"W3082402342","doi":"10.1007/978-1-0716-0771-8_7","title":"Degradation of Toxic RNA in Myotonic Dystrophy Using Gapmer Antisense Oligonucleotides","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Myotonic dystrophy; RNase P; RNA; RNase H; Biology; Nuclease; Antisense RNA; Trinucleotide repeat expansion; Myotonia; Gene; Oligonucleotide; Genetics; Cell biology; Allele","score_opus":0.1243174793214595,"score_gpt":0.4583377042524734,"score_spread":0.3340202249310139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082402342","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021233296,0.88713336,0.09008369,0.00001431047,0.00031118593,0.0010540334,0.00006595988,0.000022434266,0.000081712235],"genre_scores_gemma":[0.0003625353,0.72148335,0.27786395,0.00012830664,0.00002226688,0.000052196767,0.0000136845465,0.00006710098,0.0000066264797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98865086,0.008771172,0.0009884513,0.0010486976,0.00013344488,0.00040740045],"domain_scores_gemma":[0.99820405,0.00065093697,0.0005160751,0.0005136123,0.000031190582,0.000084153675],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004960361,0.000462648,0.0017411624,0.0006176319,0.000028202092,0.00001576065,0.00051897526,0.00028784593,0.000021207643],"category_scores_gemma":[0.0027338215,0.00042772054,0.0003608266,0.001248135,0.00028767477,0.000027292444,0.0002646324,0.0004319998,0.000007102999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006277334,0.00004622782,0.000020264428,0.0008802236,0.000009569591,0.00014410299,0.000008767683,0.0000651139,0.76718706,0.0005276279,5.914859e-7,0.23110417],"study_design_scores_gemma":[0.0002412159,0.00013291492,0.000010867693,0.0010643253,0.00016223377,0.000043641376,0.0000042735164,0.000397376,0.9749048,0.0005012361,0.022108952,0.00042821188],"about_ca_topic_score_codex":0.00002532456,"about_ca_topic_score_gemma":0.0000026297928,"teacher_disagreement_score":0.23067595,"about_ca_system_score_codex":0.00009621887,"about_ca_system_score_gemma":0.00025886588,"threshold_uncertainty_score":0.99981743},"labels":[],"label_agreement":null},{"id":"W3082451423","doi":"10.1007/978-1-0716-0771-8_17","title":"Detection of Locked Nucleic Acid Gapmers from Mouse Muscle Samples Using ELISA","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Nucleic acid; Biology; Oligonucleotide; In vivo; DNA; Computational biology; Nucleotide; Morpholino; Biochemistry; Molecular biology; Genetics; Gene knockdown; Gene","score_opus":0.03467997123762009,"score_gpt":0.33507965325800004,"score_spread":0.30039968202038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082451423","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1037356,0.0067856354,0.8795985,0.000058197897,0.0005293311,0.00058146485,0.00030287172,0.000038213388,0.008370194],"genre_scores_gemma":[0.22546914,0.0016927769,0.7655613,0.0020221497,0.0005355375,0.000060287457,0.0024380607,0.00038608717,0.0018346942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99752295,0.0005631251,0.0005797753,0.00093160424,0.00008406945,0.0003184635],"domain_scores_gemma":[0.9987317,0.00006973735,0.00038707405,0.00064473884,0.00007496625,0.0000918139],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00031686903,0.0004597903,0.0007280713,0.00016502256,0.000050386006,0.000006049468,0.00038095456,0.0012789184,0.00010970644],"category_scores_gemma":[0.0002978849,0.00049817126,0.00034489023,0.00006373787,0.00042496246,0.0000027298354,0.00031652182,0.00041870194,0.0000064514456],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023146899,0.000025012008,0.000036375215,0.00003329232,0.00020989084,0.0000060016273,0.000030320049,0.00008317238,0.9842592,0.0012339286,0.000014765652,0.0138366055],"study_design_scores_gemma":[0.0006651208,0.00036233154,0.00006925451,0.00003192112,0.00010679501,0.0000027456824,0.000037187918,0.00015184205,0.9624637,0.01946347,0.016117765,0.0005279133],"about_ca_topic_score_codex":0.00018090043,"about_ca_topic_score_gemma":0.000067487,"teacher_disagreement_score":0.12173354,"about_ca_system_score_codex":0.000032300457,"about_ca_system_score_gemma":0.000101401645,"threshold_uncertainty_score":0.999747},"labels":[],"label_agreement":null},{"id":"W3082528258","doi":"10.1007/978-1-0716-0771-8_2","title":"Development and Clinical Applications of Antisense Oligonucleotide Gapmers","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Toronto; University of Alberta","funders":"","keywords":"Oligonucleotide; Antisense therapy; Biology; Gene; Genetics; DNA; Computational biology; Biochemistry; Locked nucleic acid","score_opus":0.04626934399409309,"score_gpt":0.46957945250144234,"score_spread":0.42331010850734924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082528258","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012547066,0.83513,0.16373824,0.000009704016,0.000077442426,0.00053466536,0.0000386507,0.000006904563,0.00033895692],"genre_scores_gemma":[0.000006305562,0.6199989,0.379588,0.0000541616,0.00003989847,0.00010139894,0.0001696002,0.000028130733,0.000013630975],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967457,0.0011602056,0.0010163492,0.0007637185,0.000057781308,0.00025621505],"domain_scores_gemma":[0.9988282,0.00012820897,0.0003768729,0.00045846537,0.000038209655,0.00017008939],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00064308016,0.00034111028,0.0012906016,0.00011842529,0.000026797723,0.0000072825624,0.0002916542,0.0005521638,0.0000059522645],"category_scores_gemma":[0.000399614,0.00030166176,0.0003522731,0.00019808499,0.00030879068,8.6602125e-7,0.00036901777,0.00025976158,0.000004002472],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011677072,0.0000623918,0.00011826747,0.0013805613,0.00020685657,0.000022826436,0.0000071820896,3.2489365e-7,0.002773384,0.0005187624,0.00001866193,0.9948791],"study_design_scores_gemma":[0.00026603116,0.0000841107,0.000009905776,0.00033258492,0.00022749882,0.000025616358,0.000012903259,0.0000038809144,0.0033994233,0.00008743102,0.9952527,0.00029788766],"about_ca_topic_score_codex":0.000005200798,"about_ca_topic_score_gemma":0.0000035559701,"teacher_disagreement_score":0.9952341,"about_ca_system_score_codex":0.000013507315,"about_ca_system_score_gemma":0.0003175193,"threshold_uncertainty_score":0.99994355},"labels":[],"label_agreement":null},{"id":"W3082667831","doi":"10.1007/978-1-0716-0771-8_5","title":"Development of Antisense Oligonucleotide Gapmers for the Treatment of Dyslipidemia and Lipodystrophy","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Lipid metabolism and disorders","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; Women and Children’s Health Research Institute; University of Alberta","funders":"","keywords":"Antisense therapy; Lipodystrophy; Spinal muscular atrophy; Exon skipping; Medicine; Genetics; Bioinformatics; Biology; Exon; Oligonucleotide; Alternative splicing; Gene","score_opus":0.0717840578029925,"score_gpt":0.4590337268444173,"score_spread":0.38724966904142477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082667831","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000085133004,0.8666627,0.13142557,0.00005399013,0.00023549057,0.0014449338,0.0000304817,0.0000070517344,0.00005468506],"genre_scores_gemma":[9.897724e-7,0.5321685,0.46758795,0.000036800244,0.000036745027,0.000108298176,0.000029851948,0.00002196186,0.00000890882],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977639,0.0006131577,0.00091625086,0.0004021362,0.000064824104,0.00023977707],"domain_scores_gemma":[0.9983017,0.0008221448,0.00039706405,0.00035532567,0.000044965553,0.00007882616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064077455,0.0003359509,0.0025885303,0.00019175046,0.000025126747,0.0000021543115,0.00012785496,0.0002886862,0.000006628769],"category_scores_gemma":[0.0004892904,0.00019610114,0.00043719864,0.0002619038,0.00023684416,0.000005375362,0.00005304056,0.00012579087,6.5762543e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057260706,0.0000908069,0.000018269082,0.0042458647,0.0005403942,0.0000062349195,0.00024800672,2.9085697e-7,0.004548507,0.00052791287,0.000008536505,0.9897079],"study_design_scores_gemma":[0.0010043225,0.0003908789,0.000017492013,0.0006898276,0.0015615487,0.000011434176,0.00006713287,0.000011970146,0.0033013762,0.000085600244,0.99270886,0.00014958259],"about_ca_topic_score_codex":0.000011692842,"about_ca_topic_score_gemma":0.0000020626906,"teacher_disagreement_score":0.9927003,"about_ca_system_score_codex":0.00004194409,"about_ca_system_score_gemma":0.0003640874,"threshold_uncertainty_score":0.7996773},"labels":[],"label_agreement":null},{"id":"W3082958409","doi":"10.1007/978-1-0716-0771-8_4","title":"Development of Antisense Oligonucleotide Gapmers for the Treatment of Huntington’s Disease","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Neurodegenerative Diseases","field":"Neuroscience","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; Women and Children’s Health Research Institute; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"RNase H; Huntingtin; Oligonucleotide; Huntingtin Protein; RNase P; Huntington's disease; Biology; Computational biology; Genetics; Gene knockdown; Cell biology; Molecular biology; Disease; Gene; Medicine; RNA; Mutant","score_opus":0.1235472151574415,"score_gpt":0.4580299322208766,"score_spread":0.33448271706343513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3082958409","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00073601166,0.84480804,0.15182658,0.00003741008,0.00029431534,0.002070067,0.00019125194,0.000013296832,0.000023032891],"genre_scores_gemma":[0.000021447653,0.65787214,0.34155542,0.000067107336,0.00001877307,0.0003958387,0.000016008644,0.000042192765,0.000011090741],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955263,0.0023664176,0.00092072244,0.0007610366,0.00010958171,0.00031595695],"domain_scores_gemma":[0.99680614,0.0019367633,0.00056524255,0.00054416904,0.000041327272,0.0001063508],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034707788,0.00041430327,0.0014731359,0.0001779789,0.00005765589,0.00000707983,0.0005009039,0.00011011105,0.000010561985],"category_scores_gemma":[0.0020430724,0.00027226543,0.000617245,0.00039655756,0.00031418976,0.0000067957367,0.000121854195,0.000092245784,0.00000238497],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002762252,0.00016699063,0.0000071890904,0.0015036147,0.000064708285,0.000008697119,0.000105497515,0.000011978707,0.15406862,0.00052589906,0.0000024803717,0.8435067],"study_design_scores_gemma":[0.00019626794,0.00012685574,0.00000682371,0.00023410666,0.00033975506,8.666906e-7,0.0000077660325,0.000022390477,0.4887176,0.00009688952,0.51008594,0.00016472678],"about_ca_topic_score_codex":0.000003041581,"about_ca_topic_score_gemma":0.0000013878399,"teacher_disagreement_score":0.843342,"about_ca_system_score_codex":0.00006284095,"about_ca_system_score_gemma":0.00051693997,"threshold_uncertainty_score":0.99997294},"labels":[],"label_agreement":null},{"id":"W3083440639","doi":"10.1007/978-1-0716-0868-5_5","title":"Study Essential Gene Functions by Plasmid Shuffling","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Plasmid; URA3; Selectable marker; Gene; Biology; Genetics; T-DNA Binary system; Electroporation; Molecular biology; Recombinant DNA; Vector (molecular biology)","score_opus":0.03228926084457713,"score_gpt":0.40742854723173866,"score_spread":0.37513928638716154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083440639","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44306147,0.0010428762,0.5545437,0.00040339754,0.00015993757,0.00029124026,0.000030581345,0.000014198895,0.00045262685],"genre_scores_gemma":[0.7671002,0.000111880036,0.23036315,0.0012837944,0.0003236012,0.00013641106,0.00030685784,0.00006260511,0.00031151235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741334,0.0010482336,0.00030743578,0.0007009613,0.00011575239,0.00041429527],"domain_scores_gemma":[0.99934864,0.000037567585,0.000052309824,0.0003336468,0.00006500506,0.00016285367],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057900226,0.00020578805,0.0002489507,0.00007059244,0.00007023322,0.000021037225,0.0003599776,0.00022785399,0.000058325284],"category_scores_gemma":[0.00040725974,0.00020118561,0.000102049016,0.0002885456,0.000115313254,0.0000016564458,0.00039331018,0.0002710684,0.000024781431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000109448585,0.00016505977,0.0050177467,0.0000066801695,0.00007509268,0.00002214726,0.00007793592,0.0002517259,0.9910039,0.000025615227,0.0005493323,0.0026953216],"study_design_scores_gemma":[0.0008445259,0.0010726646,0.00014056315,0.0000017759983,0.000017264338,0.000008530473,0.00018771795,0.00034030972,0.9810183,0.00009009081,0.016041618,0.00023665806],"about_ca_topic_score_codex":0.000025466634,"about_ca_topic_score_gemma":0.000010918941,"teacher_disagreement_score":0.32418054,"about_ca_system_score_codex":0.000011989102,"about_ca_system_score_gemma":0.0000698874,"threshold_uncertainty_score":0.82041115},"labels":[],"label_agreement":null},{"id":"W3083461903","doi":"10.1007/978-1-0716-0868-5_18","title":"High-Throughput Rapid Yeast Chronological Lifespan Assay","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"GABA and Rice Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Throughput; Yeast; Computational biology; Biology; Computer science; Genetics; Telecommunications","score_opus":0.0639209597178891,"score_gpt":0.36500086283478234,"score_spread":0.30107990311689325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083461903","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0063638934,0.024025243,0.12085119,0.03936528,0.0037518272,0.0042110044,0.0009417567,0.00097041915,0.79951936],"genre_scores_gemma":[0.014555094,0.0060000126,0.86125547,0.006626481,0.0041056904,0.00023069848,0.0023826265,0.000055434168,0.1047885],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9962491,0.0013544922,0.00050730363,0.0010562146,0.00021294397,0.0006199834],"domain_scores_gemma":[0.9987274,0.00062223733,0.00017976455,0.00018688569,0.00007117623,0.00021258146],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013670187,0.0004666935,0.00088271557,0.000058274258,0.00009715235,0.000036901027,0.0007945681,0.0013574477,0.003022988],"category_scores_gemma":[0.00044707203,0.00018328556,0.00033976516,0.00017086428,0.000400434,0.000021814585,0.000578663,0.0012069985,0.00030627064],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032446547,0.000032406122,0.00003315605,0.000012980141,0.0000623542,0.00018059296,0.000009488079,0.000001277356,0.6218639,0.07853953,0.0003109114,0.29892096],"study_design_scores_gemma":[0.00043797205,0.0019034347,0.0020330558,0.00008254117,0.000061618855,0.000053203545,0.000032146345,0.000046840098,0.01670485,0.13967498,0.8377893,0.0011800752],"about_ca_topic_score_codex":0.000111003115,"about_ca_topic_score_gemma":0.00006302764,"teacher_disagreement_score":0.8374784,"about_ca_system_score_codex":0.00008236689,"about_ca_system_score_gemma":0.00004054023,"threshold_uncertainty_score":0.999939},"labels":[],"label_agreement":null},{"id":"W3083589370","doi":"10.1007/978-1-0716-0868-5_4","title":"Genomic Promoter Shuffling by Using Recyclable Cassettes","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"URA3; Genetics; Selectable marker; Shuffling; Tandem repeat; Biology; Genome; Gene; Locus (genetics); Homologous recombination; Promoter; Saccharomyces cerevisiae; Computational biology; Plasmid; Computer science","score_opus":0.050104007707287714,"score_gpt":0.4095440376786322,"score_spread":0.35944002997134444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083589370","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54885006,0.0029471864,0.44683376,0.0006379214,0.00008692359,0.0002232338,0.000021221917,0.000011073633,0.0003886098],"genre_scores_gemma":[0.16977881,0.00018036018,0.8271817,0.0022455347,0.0002071428,0.000034284298,0.00013640591,0.000068547386,0.00016721713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99772483,0.000808912,0.00028439093,0.00062578294,0.00007701969,0.0004790865],"domain_scores_gemma":[0.9994185,0.000030435174,0.000060296188,0.00029473496,0.000052770858,0.00014326909],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060600485,0.00020172895,0.00024925888,0.00005935989,0.000051176045,0.000021244678,0.00034817753,0.00029278774,0.000045281435],"category_scores_gemma":[0.00036566678,0.0001964864,0.00009115315,0.00020700936,0.00012540743,0.0000019006036,0.0003533521,0.00025025333,0.000010943892],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005266875,0.000026248988,0.0036785945,0.000019335144,0.00003417816,0.000012751925,0.00003470012,0.0003049357,0.9903459,0.000030170173,0.0001827233,0.005277769],"study_design_scores_gemma":[0.00036864085,0.0002893596,0.000051984272,0.000005962019,0.000008750624,0.000014226235,0.000020340283,0.0028413767,0.97172016,0.00033229517,0.02410696,0.00023993473],"about_ca_topic_score_codex":0.000044001856,"about_ca_topic_score_gemma":0.0000038046683,"teacher_disagreement_score":0.38034794,"about_ca_system_score_codex":0.000022886617,"about_ca_system_score_gemma":0.00008284197,"threshold_uncertainty_score":0.8012483},"labels":[],"label_agreement":null},{"id":"W3083616888","doi":"10.1007/978-1-0716-0868-5_6","title":"Scarless Genomic Protein Labeling in Saccharomyces cerevisiae","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"URA3; Saccharomyces cerevisiae; Fusion protein; Epitope; Homologous recombination; Biology; Protein subcellular localization prediction; Genetics; Green fluorescent protein; Yeast; Gene; Recombinant DNA; Antigen","score_opus":0.034608332386288326,"score_gpt":0.39374578675904903,"score_spread":0.3591374543727607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083616888","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8363978,0.0051932917,0.15634723,0.0008813091,0.00006729515,0.0004771771,0.000012810641,0.000012133068,0.0006109553],"genre_scores_gemma":[0.5426531,0.00023029328,0.45592636,0.00078716385,0.00013615923,0.00010853979,0.000051379393,0.000043308686,0.00006373243],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99725235,0.0011284433,0.00037043693,0.00067499076,0.00008608303,0.00048767173],"domain_scores_gemma":[0.9994175,0.000028787119,0.00006288951,0.00031538092,0.00004782367,0.00012762944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008560937,0.00021224884,0.00031581888,0.00012069198,0.000028951301,0.000019651197,0.00046980818,0.00029490385,0.000037192003],"category_scores_gemma":[0.000467039,0.00020752213,0.000092196926,0.00033920523,0.00011329507,0.0000020000878,0.00042243072,0.00031513217,0.000017337738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008833987,0.000032792355,0.006725236,0.000041162468,0.000019155174,0.000025050762,0.000055911365,0.00023995081,0.97929585,0.0003011894,0.00001117644,0.013164167],"study_design_scores_gemma":[0.0007262651,0.0002828629,0.0007683239,0.000022328037,0.0000041721887,0.000005791545,0.00005640643,0.0005899457,0.99090356,0.0008701076,0.005499177,0.00027107383],"about_ca_topic_score_codex":0.000045576475,"about_ca_topic_score_gemma":0.000021810401,"teacher_disagreement_score":0.29957914,"about_ca_system_score_codex":0.000022640865,"about_ca_system_score_gemma":0.00009718605,"threshold_uncertainty_score":0.84625065},"labels":[],"label_agreement":null},{"id":"W3083706709","doi":"10.1007/978-1-0716-0868-5_1","title":"Use of Yeast Plasmids: Transformation and Inheritance Assays","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Plasmid; Yeast; Transformation (genetics); Biology; Saccharomyces cerevisiae; Genetics; Inheritance (genetic algorithm); Model organism; Low copy number; Escherichia coli; Gene","score_opus":0.057759298346630995,"score_gpt":0.38244647405122134,"score_spread":0.3246871757045903,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3083706709","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45564887,0.0008783889,0.5425775,0.00038280114,0.000036788897,0.00015691455,0.000029389721,0.000004806642,0.00028455397],"genre_scores_gemma":[0.56500953,0.00041584505,0.43397343,0.00046374215,0.000032299515,0.00001850163,0.0000478822,0.000016803893,0.000021970833],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987963,0.0004642985,0.00022597633,0.00026927586,0.00006025665,0.00018392169],"domain_scores_gemma":[0.9996534,0.000030050622,0.000044566084,0.00014621603,0.000050808518,0.000074968404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031479512,0.00010744094,0.0001742115,0.0000467517,0.000015670292,0.000008376848,0.00012325388,0.000174351,0.000008601831],"category_scores_gemma":[0.00035520125,0.00010249643,0.00004591535,0.00014550562,0.00011796279,0.0000032689284,0.000096566684,0.000117747164,0.0000013450161],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009711357,0.000017428869,0.0019737533,0.000035543988,0.000018589237,0.000002270454,0.000109491,0.00010121732,0.9826763,0.00057780853,0.0000197786,0.014370652],"study_design_scores_gemma":[0.0003232112,0.0003667005,0.0007986888,0.0000074624613,0.0000049451564,0.000005459318,0.00003337967,0.0012060925,0.9873717,0.0003664067,0.009400906,0.000115066076],"about_ca_topic_score_codex":0.000013633127,"about_ca_topic_score_gemma":0.000007425256,"teacher_disagreement_score":0.10936067,"about_ca_system_score_codex":0.0000042310708,"about_ca_system_score_gemma":0.00003144495,"threshold_uncertainty_score":0.4179683},"labels":[],"label_agreement":null},{"id":"W3084464175","doi":"10.1007/978-1-0716-0687-2_11","title":"Methods for Measuring CRISPR/Cas9 DNA Cleavage in Cells","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Metabolomics Innovation Centre; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Cas9; Computational biology; Genome editing; DNA; Cleavage (geology); Biology; Genome; Gene; Genetics; Computer science","score_opus":0.03703542128891278,"score_gpt":0.4605061170783004,"score_spread":0.4234706957893876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3084464175","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015314253,0.0026867674,0.9804431,0.00032792301,0.00029670066,0.00044913965,0.000009443885,0.000021881733,0.00045077153],"genre_scores_gemma":[0.040510837,0.00011700956,0.95798236,0.001019921,0.00013328371,0.00011950808,0.000031918917,0.000056556913,0.000028577151],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973048,0.00093951315,0.0004661179,0.00071624806,0.000050888288,0.00052241073],"domain_scores_gemma":[0.99925,0.0001419931,0.00007130294,0.00036966935,0.00004012257,0.00012694136],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001778368,0.00027185658,0.00041660745,0.00012487065,0.000028758051,0.000013707199,0.00035902456,0.00036293865,0.000009459092],"category_scores_gemma":[0.0010312604,0.0002908978,0.00017545657,0.0002638041,0.000067739,0.00000239731,0.00021443132,0.00022854179,0.0000024681717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007469382,0.00002651742,0.00026713777,0.000052771178,0.000028791246,0.000007713197,0.000105788604,0.0010684344,0.9589188,0.00020637641,0.00007218413,0.039170757],"study_design_scores_gemma":[0.00080804696,0.00028436593,0.00012009361,0.000010532667,0.000014782112,0.0000051989437,0.00006396863,0.0025785535,0.9606327,0.0007595361,0.03440549,0.00031675684],"about_ca_topic_score_codex":0.000017216791,"about_ca_topic_score_gemma":0.000013662922,"teacher_disagreement_score":0.038854,"about_ca_system_score_codex":0.000022840939,"about_ca_system_score_gemma":0.000044325476,"threshold_uncertainty_score":0.99995434},"labels":[],"label_agreement":null},{"id":"W3086851723","doi":"10.1007/978-1-0716-0687-2_12","title":"In Vitro Assays for Comparing the Specificity of First- and Next-Generation CRISPR/Cas9 Systems","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Cas9; Computational biology; DNA; Biology; Guide RNA; RNA; Genome editing; Genetics; Gene","score_opus":0.0651366807759755,"score_gpt":0.4067274613496865,"score_spread":0.341590780573711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3086851723","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17469768,0.003170017,0.82118016,0.00043543466,0.00015207284,0.00030103026,0.000007597351,0.0000033631097,0.000052640116],"genre_scores_gemma":[0.83757484,0.000110492045,0.16187659,0.00019874217,0.00013332564,0.000055335444,0.000031259067,0.00001428038,0.0000051468587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891365,0.00027765206,0.00029025218,0.0003011025,0.000035145313,0.00018223157],"domain_scores_gemma":[0.99960816,0.00007604492,0.00006114929,0.00018586198,0.0000327028,0.000036069632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000670548,0.00012269987,0.00025289538,0.000042726482,0.00002621748,0.000012378117,0.00014544089,0.0001445787,0.0000011484692],"category_scores_gemma":[0.0003302508,0.00010453872,0.000053493994,0.000104779625,0.00006224279,0.0000020970126,0.00009647837,0.000097210126,1.4482178e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057567453,0.000012285673,0.0011999045,0.000050839466,0.000016403064,0.0000013157818,0.000113458525,0.0041796276,0.9931743,0.00039961582,0.000042096195,0.00075255387],"study_design_scores_gemma":[0.00043300973,0.00012351591,0.00019045062,0.000005738844,0.000009515618,0.000005114884,0.00009607363,0.06577112,0.92524403,0.00008237384,0.007925493,0.00011353295],"about_ca_topic_score_codex":0.000045544894,"about_ca_topic_score_gemma":0.000023275334,"teacher_disagreement_score":0.66287714,"about_ca_system_score_codex":0.0000085278625,"about_ca_system_score_gemma":0.000011864609,"threshold_uncertainty_score":0.42629653},"labels":[],"label_agreement":null},{"id":"W3087115924","doi":"10.1007/978-1-0716-0779-4_17","title":"Multiscale In Vivo Imaging of Collective Cell Migration in Drosophila Embryos","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; Ted Rogers Centre for Heart Research; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Live cell imaging; Cell migration; Biology; Cell; Confocal microscopy; Embryonic stem cell; Cell biology; Confocal; Microscopy; Collective behavior; Neuroscience; Pathology; Physics; Optics; Medicine; Gene","score_opus":0.012136066998273425,"score_gpt":0.36013953360324974,"score_spread":0.34800346660497633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087115924","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26689842,0.0008378118,0.73128617,0.00021295917,0.00003766493,0.0003696906,0.000013394701,0.000010724924,0.00033316054],"genre_scores_gemma":[0.30013397,0.000090567664,0.69926506,0.00037203258,0.000016050972,0.000062242696,0.000019755682,0.000021733793,0.000018582054],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998005,0.0007249615,0.00042251742,0.00052151206,0.000045627767,0.00028038226],"domain_scores_gemma":[0.99951994,0.00004394472,0.00012059216,0.00022990495,0.000043904085,0.000041733576],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044530828,0.00017928513,0.0003184625,0.00017025994,0.0000126981495,0.0000040363307,0.00023414376,0.00022344598,0.0000069489442],"category_scores_gemma":[0.0004210806,0.0001970821,0.000065624175,0.00044238093,0.00015905185,0.000004527412,0.00016275587,0.00021312288,4.844525e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102703445,0.00006798674,0.04562149,0.000020546768,0.0000033869258,0.000016530033,0.00023599775,0.00021587852,0.9526101,0.000048675804,0.000023998064,0.0010327103],"study_design_scores_gemma":[0.00066136156,0.00019766975,0.001241495,0.000020962014,0.0000029105324,0.000002505764,0.00008494143,0.0014575815,0.994418,0.0013602223,0.00037202967,0.00018032442],"about_ca_topic_score_codex":0.0000926287,"about_ca_topic_score_gemma":0.000116501666,"teacher_disagreement_score":0.044379994,"about_ca_system_score_codex":0.000053382522,"about_ca_system_score_gemma":0.00007694248,"threshold_uncertainty_score":0.8036775},"labels":[],"label_agreement":null},{"id":"W3087252219","doi":"10.1007/978-1-0716-0779-4_23","title":"Methodologies for Following EMT In Vivo at Single Cell Resolution","year":2020,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Mesoderm; Population; Biology; Embryo; Epithelial–mesenchymal transition; Cell biology; Cell; Computational biology; Gene; Transition (genetics); Genetics; Embryonic stem cell; Medicine","score_opus":0.1280179173003091,"score_gpt":0.43721291903017595,"score_spread":0.30919500172986686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087252219","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005670595,0.56498194,0.4333573,0.00002113167,0.00052838743,0.00071106886,0.00004873773,0.00001672837,0.0002779844],"genre_scores_gemma":[0.000005771595,0.4771753,0.5218526,0.0001253464,0.00010646157,0.00024837663,0.00027163545,0.000082333616,0.00013215563],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9933085,0.0036564807,0.0009942491,0.0012712606,0.00008064504,0.0006888643],"domain_scores_gemma":[0.99842024,0.0005372665,0.00032358142,0.00058995717,0.000036677004,0.000092261325],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0020635321,0.0006379262,0.0019700162,0.00028440176,0.000064372485,0.000020584408,0.0006249058,0.0015441554,0.000008927303],"category_scores_gemma":[0.0014585088,0.0006049295,0.001091717,0.00038439262,0.00012941081,0.0000029210848,0.0003706155,0.00042479497,0.0000031435509],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086297885,0.000073770134,0.000022147184,0.0016109622,0.00010305085,0.00003549605,0.00003073897,0.000021351483,0.7018958,0.00006797805,0.000088466404,0.29596397],"study_design_scores_gemma":[0.0006346014,0.0004912969,4.074605e-7,0.0004098771,0.00020272013,0.000013295785,0.000013537671,0.000034117875,0.14525351,0.0005882253,0.85178256,0.00057584216],"about_ca_topic_score_codex":0.000033813696,"about_ca_topic_score_gemma":0.000070777256,"teacher_disagreement_score":0.8516941,"about_ca_system_score_codex":0.00019795517,"about_ca_system_score_gemma":0.00018429029,"threshold_uncertainty_score":0.99975204},"labels":[],"label_agreement":null},{"id":"W3087282326","doi":"10.1007/978-1-0716-0795-4_32","title":"A Method to Evaluate In Vivo CD8+ T Cell Cytotoxicity in a Murine Model","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Cytotoxic T cell; In vivo; CTL*; CD8; Cytotoxicity; ELISPOT; Flow cytometry; Biology; Immunology; T cell; Molecular biology; Cell biology; In vitro; Immune system; Biochemistry","score_opus":0.03344756777150008,"score_gpt":0.34869590991558613,"score_spread":0.31524834214408604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087282326","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0052649463,0.008799246,0.858427,0.001093684,0.0008233696,0.00249667,0.00020328545,0.00014768296,0.12274414],"genre_scores_gemma":[0.006618134,0.00043741683,0.9094635,0.003445298,0.000048839902,0.000379548,0.00021251019,0.00023406772,0.07916066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99113643,0.0041410076,0.0015514084,0.0019333877,0.000067588924,0.0011701493],"domain_scores_gemma":[0.9977932,0.00068571797,0.0003885451,0.0009611128,0.00008735682,0.000084068444],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0033071605,0.0010142386,0.002348968,0.0014764586,0.000055490047,0.000011185982,0.0010940465,0.0030284903,0.0009601175],"category_scores_gemma":[0.00030002568,0.0010157804,0.0003945259,0.0003449133,0.00036917464,0.000031372423,0.0010945352,0.0028352013,0.00040198767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00052405876,0.00017843727,0.000053970947,0.000067392815,0.00013076489,0.00030284654,0.0003310032,0.0009780691,0.97530335,0.01683979,0.0001559083,0.0051344144],"study_design_scores_gemma":[0.0034036608,0.000706801,0.0000070257793,0.0001370428,0.00008872569,0.00007944102,0.000029421233,0.00081536826,0.88375866,0.06676068,0.043096352,0.0011168199],"about_ca_topic_score_codex":0.00033875616,"about_ca_topic_score_gemma":0.00032169386,"teacher_disagreement_score":0.09154469,"about_ca_system_score_codex":0.0003236805,"about_ca_system_score_gemma":0.00029879063,"threshold_uncertainty_score":0.99995315},"labels":[],"label_agreement":null},{"id":"W3087474231","doi":"10.1007/978-1-0716-0795-4_28","title":"Application of Cryogenic Transmission Electron Microscopy for Evaluation of Vaccine Delivery Carriers","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; National Institute for Nanotechnology","funders":"","keywords":"Immunogold labelling; Transmission electron microscopy; Electron tomography; Nanocarriers; Materials science; Electron microscope; Cryo-electron microscopy; Microscopy; Nanotechnology; Biophysics; Optics; Biology; Scanning transmission electron microscopy; Nanoparticle; Physics","score_opus":0.01550450198100787,"score_gpt":0.44024758617539794,"score_spread":0.42474308419439005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087474231","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16073765,0.002500293,0.8358091,0.00014182745,0.000009555818,0.0007521762,0.000021136893,0.000007421469,0.00002083497],"genre_scores_gemma":[0.32041273,0.00021410607,0.678715,0.00015433769,0.000018975383,0.00026553025,0.0001972289,0.000019478837,0.0000026171251],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99870694,0.00029045666,0.00037186613,0.00037659673,0.0000613823,0.00019273213],"domain_scores_gemma":[0.99928087,0.000027164415,0.0001894428,0.0002489497,0.00021068148,0.00004286573],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007132577,0.0001287765,0.00024183828,0.00005444304,0.000022344318,0.0000013941099,0.00019541378,0.00019915191,0.0000040626705],"category_scores_gemma":[0.00012473814,0.00013337721,0.00011434945,0.00020750257,0.000053357584,0.000002111236,0.00003374561,0.00007838323,1.2511848e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019716089,0.000033265813,0.00020617044,0.0000318726,0.00002382318,2.4349681e-8,0.000021802054,0.00046586082,0.96200013,0.00052225887,0.000022516062,0.036475092],"study_design_scores_gemma":[0.00083625125,0.0006047247,0.000040353705,0.0000051712846,0.00005499384,9.4491077e-7,0.000011074976,0.0032945971,0.9851358,0.0030256773,0.0068766563,0.00011377446],"about_ca_topic_score_codex":0.000011681014,"about_ca_topic_score_gemma":0.0000027247531,"teacher_disagreement_score":0.15967508,"about_ca_system_score_codex":0.00002372539,"about_ca_system_score_gemma":0.000101561476,"threshold_uncertainty_score":0.5438965},"labels":[{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"grok","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"opus","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"split"},{"id":"W3087497783","doi":"10.1007/978-1-0716-0795-4_30","title":"The Quantification of Antigen-Specific T Cells by IFN-γ ELISpot","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"ELISPOT; Antigen; Epitope; Immune system; Antibody; Biology; Molecular biology; Chemistry; CD8; Immunology","score_opus":0.02868981995804435,"score_gpt":0.310395693788704,"score_spread":0.28170587383065965,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087497783","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00093449204,0.30782664,0.5488251,0.0020322232,0.007718052,0.0018765234,0.00049087615,0.00019165869,0.13010448],"genre_scores_gemma":[0.027554415,0.123197995,0.19874574,0.0021287836,0.0003486245,0.0003093488,0.00573155,0.0008167566,0.6411668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99576247,0.0016246255,0.0011126475,0.00091061083,0.000044697208,0.0005449698],"domain_scores_gemma":[0.99721164,0.0008939233,0.0007199396,0.0010208874,0.0001248847,0.000028749495],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012175915,0.0005485288,0.001068196,0.00021518263,0.00016522495,0.000012574402,0.0010251439,0.0019175451,0.00042628165],"category_scores_gemma":[0.00010877671,0.00042884404,0.00034970834,0.00011429617,0.0015171829,0.000016740169,0.00031329764,0.0013305821,0.0004526194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013379859,0.0000436981,0.0000071623413,0.000015310385,0.00026822384,0.000010226733,0.00004844828,0.0000013785601,0.8687317,0.098145135,0.0041495296,0.0284454],"study_design_scores_gemma":[0.00032627658,0.00014767078,0.0000020478064,0.000018009989,0.000020322906,0.000010529686,0.000014929434,0.000001012564,0.49730325,0.00847972,0.4934598,0.00021644069],"about_ca_topic_score_codex":0.0000354213,"about_ca_topic_score_gemma":0.000009952463,"teacher_disagreement_score":0.5110623,"about_ca_system_score_codex":0.000051652787,"about_ca_system_score_gemma":0.000087608685,"threshold_uncertainty_score":0.99981636},"labels":[],"label_agreement":null},{"id":"W3087619454","doi":"10.1007/978-1-0716-0795-4_31","title":"Measurement of Antigen-Specific IgG Titers by Direct ELISA","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Antigen; Antibody; Titer; Hemagglutinin (influenza); Antibody titer; Virology; Immunology; Biology; Chemistry","score_opus":0.1523312670981731,"score_gpt":0.44846394095629105,"score_spread":0.2961326738581179,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087619454","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007100443,0.16089588,0.20024393,0.0009779276,0.0004872355,0.0017739363,0.00017904502,0.000083203835,0.6352878],"genre_scores_gemma":[0.00063018355,0.03810493,0.94000626,0.0035578306,0.0003229163,0.00015607757,0.00021197842,0.000338241,0.01667156],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9970853,0.00059717393,0.0007015484,0.0007172267,0.0004891885,0.00040960006],"domain_scores_gemma":[0.9985714,0.00015397863,0.000229465,0.0006033486,0.00031280913,0.00012897365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001962901,0.000425484,0.0013767694,0.00036912452,0.000031183125,0.0000055670353,0.00026529655,0.00050812634,0.00020636231],"category_scores_gemma":[0.00084379426,0.00037291832,0.00031482714,0.000107622596,0.0005007525,0.000009722414,0.00027924374,0.0007417,0.00003833981],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027904715,0.000044358247,0.0002582052,0.00020800547,0.0007626693,0.00016680564,0.00008517369,0.000001128114,0.94958866,0.0072584013,0.0039955033,0.037352026],"study_design_scores_gemma":[0.00080806133,0.00045854817,0.00006922013,0.0003263956,0.000055546283,0.000005610239,0.000009377127,0.0000052113296,0.17959079,0.002002387,0.8163723,0.00029657074],"about_ca_topic_score_codex":0.000026925658,"about_ca_topic_score_gemma":0.0000029270645,"teacher_disagreement_score":0.8123768,"about_ca_system_score_codex":0.00025810866,"about_ca_system_score_gemma":0.00014283614,"threshold_uncertainty_score":0.99987227},"labels":[],"label_agreement":null},{"id":"W3087662263","doi":"10.1007/978-1-0716-0795-4_29","title":"Methods to Evaluate Immune Cell Recruitment and Cellular Uptake and Distribution of Antigen Following Intramuscular Administration of Vaccine to Mice","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Immune system; Antigen; Immunology; Flow cytometry; Vaccination; Cell; Biology; T cell; Medicine","score_opus":0.041693864091815455,"score_gpt":0.3758398461168992,"score_spread":0.3341459820250837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3087662263","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028618064,0.016632909,0.9481386,0.00038172505,0.0018858856,0.0016742193,0.000042705084,0.000026048147,0.0025998235],"genre_scores_gemma":[0.08776899,0.0014179088,0.89373523,0.0006699548,0.000059178765,0.00020231058,0.0022936035,0.00015200693,0.013700815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964709,0.0014697044,0.001075579,0.00067706255,0.000046456305,0.00026028312],"domain_scores_gemma":[0.99873716,0.00025887013,0.0004385371,0.00037781685,0.00013338843,0.000054221655],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022299502,0.00039382582,0.0010657773,0.0002960503,0.000052848336,0.00000816223,0.0001783507,0.0007319603,0.0001405591],"category_scores_gemma":[0.0004354653,0.00039482058,0.00023077385,0.00012338767,0.00008154081,0.000029539948,0.00024377824,0.00046775065,0.000013424199],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005167084,0.00003955818,0.00001799834,0.00008657163,0.00029673285,0.000008188,0.00016761817,0.0000067202404,0.95973754,0.002265153,0.000049725713,0.03680747],"study_design_scores_gemma":[0.0007975941,0.0014142584,0.00021395185,0.00012668748,0.0002309927,0.000018298912,0.0000652665,0.00001687672,0.88069737,0.0011106075,0.11501768,0.0002903926],"about_ca_topic_score_codex":0.000044368968,"about_ca_topic_score_gemma":0.0000040053656,"teacher_disagreement_score":0.11496796,"about_ca_system_score_codex":0.00006822149,"about_ca_system_score_gemma":0.000065348766,"threshold_uncertainty_score":0.9998504},"labels":[],"label_agreement":null},{"id":"W3092986160","doi":"10.1007/978-1-0716-0974-3_18","title":"Functional Studies of Trichoplax adhaerens Voltage-Gated Calcium Channel Activity","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Marine Invertebrate Physiology and Ecology","field":"Earth and Planetary Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Toronto","funders":"","keywords":"Biology; Evolutionary biology; Neuroscience","score_opus":0.09120627013785919,"score_gpt":0.3478880788150954,"score_spread":0.2566818086772362,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3092986160","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008871391,0.015968423,0.5893887,0.0026289802,0.010229785,0.0021122615,0.0011722734,0.0002583165,0.3693698],"genre_scores_gemma":[0.372,0.007891087,0.37780908,0.015119939,0.003226733,0.00010085935,0.009992305,0.0003108433,0.21354914],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9976865,0.0006931495,0.0004928597,0.0006802389,0.000088040426,0.00035920518],"domain_scores_gemma":[0.9983044,0.0008723602,0.00035257783,0.00028096515,0.00009762198,0.000092035625],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000715937,0.0003937772,0.0011574337,0.0002834541,0.00006539302,0.0000033214765,0.00027952317,0.0008119402,0.002800325],"category_scores_gemma":[0.00044725236,0.00034133598,0.0002114774,0.00012440122,0.0006023498,0.000029552302,0.00012088909,0.00076466706,0.000106487976],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.005478461,0.0003394415,0.03255215,0.0017403587,0.009099852,0.0016449753,0.0008492429,0.0074845483,0.24259363,0.14340262,0.015752196,0.53906256],"study_design_scores_gemma":[0.002506269,0.0034149287,0.026187772,0.000120806726,0.0005098516,0.00010259057,0.00009679718,0.010752482,0.031688876,0.867497,0.054914396,0.0022081737],"about_ca_topic_score_codex":0.0003158068,"about_ca_topic_score_gemma":0.0005564744,"teacher_disagreement_score":0.72409445,"about_ca_system_score_codex":0.000014222077,"about_ca_system_score_gemma":0.00011783153,"threshold_uncertainty_score":0.99990386},"labels":[],"label_agreement":null},{"id":"W3093333407","doi":"10.1007/978-1-0716-0974-3_6","title":"Microscopy Studies of Placozoans","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Marine Invertebrate Physiology and Ecology","field":"Earth and Planetary Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; University of Alberta","funders":"","keywords":"Biology; Evolutionary biology; Diversity (politics); Neuroscience; Cognitive science; Psychology; Sociology","score_opus":0.04860890145012012,"score_gpt":0.37057547311354605,"score_spread":0.3219665716634259,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3093333407","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020717906,0.026212983,0.05410833,0.0013745497,0.0034255425,0.0008948662,0.00036279578,0.00008772581,0.9114614],"genre_scores_gemma":[0.0032332933,0.0034277209,0.9573304,0.004678148,0.00025689363,0.000008982832,0.0008017234,0.000042458938,0.03022035],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99816585,0.00050471554,0.00050542795,0.00050728413,0.00004531525,0.0002714272],"domain_scores_gemma":[0.9987934,0.0005962961,0.0002489517,0.00026317965,0.000040950366,0.000057222293],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005458723,0.00029366964,0.00097599224,0.00017201905,0.00003334074,0.0000023606465,0.00034790218,0.0005880243,0.0025307185],"category_scores_gemma":[0.00023226443,0.00025389576,0.0001483229,0.00005128305,0.0006545457,0.000014272529,0.00008943851,0.00049825525,0.00012856105],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010294063,0.00007503093,0.07029132,0.0012848928,0.0032858078,0.0010125093,0.00085251965,0.0010126211,0.25230834,0.4375671,0.0040479857,0.22723246],"study_design_scores_gemma":[0.0005135703,0.0011293287,0.0015694442,0.00007049574,0.00012381437,0.000026855158,0.00004440447,0.00055952364,0.014920329,0.91252434,0.06784411,0.0006737949],"about_ca_topic_score_codex":0.00013713108,"about_ca_topic_score_gemma":0.00046869472,"teacher_disagreement_score":0.9032221,"about_ca_system_score_codex":0.0000060278876,"about_ca_system_score_gemma":0.0000689191,"threshold_uncertainty_score":0.9999913},"labels":[],"label_agreement":null},{"id":"W3097742030","doi":"10.1007/978-1-0716-0775-6_22","title":"Expression and Purification of Recombinant Proteins in Escherichia coli Tagged with the Metal-Binding Proteins SmbP and CusF3H+","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Genetics","funders":"","keywords":"Escherichia coli; Periplasmic space; Recombinant DNA; Fusion protein; Inclusion bodies; Affinity chromatography; FLAG-tag; Biochemistry; Protein purification; Lysis; Myc-tag; Chemistry; Target protein; Biology; Gene; Enzyme","score_opus":0.017877145793378527,"score_gpt":0.2893443634893717,"score_spread":0.2714672176959932,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097742030","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78486186,0.015131034,0.18104321,0.004497472,0.00052024884,0.007813519,0.00011243414,0.000048441252,0.005971798],"genre_scores_gemma":[0.11416563,0.0039584455,0.87650347,0.00036584563,0.00013178917,0.0005679072,0.00034421048,0.00019279432,0.0037699128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980279,0.0004594379,0.0004372074,0.0007537691,0.00007320052,0.00024846196],"domain_scores_gemma":[0.9990137,0.00003204282,0.00037601285,0.00047027314,0.000054728942,0.000053242748],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007266908,0.000356673,0.0005690809,0.00014993086,0.000045111454,0.000014168504,0.00027675042,0.0010277914,0.000006362065],"category_scores_gemma":[0.000134567,0.00025183323,0.00006199262,0.0000927529,0.00050144305,0.0000022759505,0.0003811751,0.00048260012,4.432993e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018111282,0.000025761052,0.00006495308,0.00006706789,0.000056747685,0.000008684687,0.00003724536,0.0000011797686,0.98823035,0.004786311,0.0000065339223,0.0065340353],"study_design_scores_gemma":[0.0007048195,0.0011189581,0.00011702328,0.000116986506,0.00004510058,0.000015364993,0.0000266205,0.000015564498,0.9675614,0.0035741094,0.026371794,0.00033224234],"about_ca_topic_score_codex":0.000022928456,"about_ca_topic_score_gemma":0.000052218948,"teacher_disagreement_score":0.69546026,"about_ca_system_score_codex":0.000015729353,"about_ca_system_score_gemma":0.00008312442,"threshold_uncertainty_score":0.9999934},"labels":[],"label_agreement":null},{"id":"W3097831398","doi":"10.1007/978-1-0716-1012-1_13","title":"Neurologic and Histologic Tests Used to Measure Neuroprotective Effectiveness of Virus-Derived Immune-Modulating Proteins","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Spinal Cord Injury Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Neuroprotection; Medicine; Crush injury; Spinal cord; Pathogenesis; Spinal cord injury; Anesthesia; Lesion; Immune system; Inflammation; Pathology; Immunology; Pharmacology; Surgery","score_opus":0.09300308584139019,"score_gpt":0.4299465755623523,"score_spread":0.3369434897209621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3097831398","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22130765,0.0070426464,0.73097944,0.0010941792,0.0004516855,0.016321898,0.00007227955,0.0002501752,0.022480048],"genre_scores_gemma":[0.38097808,0.00006826586,0.61631894,0.00080310117,0.000096087584,0.0007524356,0.0000474741,0.0002901857,0.0006454155],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9937761,0.0035756133,0.0006903319,0.0012322492,0.00028016232,0.00044556224],"domain_scores_gemma":[0.99754953,0.0009253195,0.0003322447,0.000691005,0.0003084927,0.00019338475],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025557582,0.00056804967,0.0018155867,0.00061867444,0.0000529023,0.000008608358,0.00033940404,0.000819662,0.000034374974],"category_scores_gemma":[0.007250043,0.00050279044,0.00024342335,0.00026662232,0.00048478323,0.000017452092,0.0006069127,0.0017280267,0.000009051607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0040652836,0.000040272673,0.0005328841,0.00055513025,0.00011831206,0.00059143937,0.00003593419,0.000008517928,0.9767863,0.0027056155,4.1014948e-7,0.014559909],"study_design_scores_gemma":[0.0023473562,0.030060623,0.015271063,0.0008499636,0.00025828963,0.00027132212,0.000010713604,0.00016201187,0.91990364,0.029215898,0.00082632207,0.0008227733],"about_ca_topic_score_codex":0.00008442096,"about_ca_topic_score_gemma":0.0000071453014,"teacher_disagreement_score":0.15967044,"about_ca_system_score_codex":0.00015937974,"about_ca_system_score_gemma":0.00018162405,"threshold_uncertainty_score":0.9997424},"labels":[],"label_agreement":null},{"id":"W3099305598","doi":"10.1007/978-1-0716-0935-4_17","title":"Probing the Conformational State of mRNPs Using smFISH and SIM","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Ribonucleoprotein; RNA; Messenger RNP; Cell biology; Translation (biology); Messenger RNA; RNA-binding protein; Biology; Biophysics; Chemistry; Computational biology; Biochemistry; Gene","score_opus":0.039005982875722864,"score_gpt":0.378334692029482,"score_spread":0.3393287091537591,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3099305598","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02822171,0.0067918696,0.9374117,0.00041540174,0.00016069101,0.00096203014,0.00012253999,0.0000116120345,0.025902443],"genre_scores_gemma":[0.02725211,0.0018253556,0.9424254,0.0026172204,0.00033211286,0.00006376488,0.00067099824,0.00022300029,0.02459005],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986021,0.00030735286,0.0004028396,0.0003521537,0.00009927158,0.00023631676],"domain_scores_gemma":[0.9992711,0.000077911754,0.0002109437,0.00028639103,0.00008923461,0.00006442886],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086403283,0.00022031848,0.00034648902,0.000094087445,0.00004791025,0.000014178655,0.00025312594,0.0002808529,0.000012763883],"category_scores_gemma":[0.00023841912,0.00017385652,0.00010543439,0.000038284095,0.00034555345,0.0000021711537,0.00035657288,0.0003440209,9.449486e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005579003,0.000004212684,0.000046424957,0.00005967461,0.00011346061,0.000008618006,0.00003663553,0.00009983158,0.97137934,0.0096473545,0.00001938131,0.01852925],"study_design_scores_gemma":[0.0015493142,0.0011098451,0.00009294559,0.0002606224,0.0001305931,0.00014767992,0.000070340786,0.0074288403,0.80757743,0.06965041,0.11086916,0.0011128054],"about_ca_topic_score_codex":0.000018491797,"about_ca_topic_score_gemma":0.000009332802,"teacher_disagreement_score":0.16380192,"about_ca_system_score_codex":0.000014619172,"about_ca_system_score_gemma":0.00014372301,"threshold_uncertainty_score":0.7089663},"labels":[],"label_agreement":null},{"id":"W309938243","doi":"10.1007/978-1-62703-432-6_15","title":"In Vivo Confocal Microscopy of the Cornea to Assess Tissue Regenerative Response After Biomaterial Implantation in Humans","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal surgery and disorders","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Ottawa","keywords":"Cornea; Biomaterial; Confocal microscopy; Regeneration (biology); Laser Microscopy; Transplantation; Regenerative medicine; Biomedical engineering; Pathology; In vivo; Confocal laser scanning microscopy; Medicine; Materials science; Confocal; Stem cell; Biology; Cell biology; Ophthalmology; Surgery; Optics","score_opus":0.028018299735930004,"score_gpt":0.42556584074797393,"score_spread":0.3975475410120439,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W309938243","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95365584,0.00007624552,0.044589873,0.00067737827,0.00030944528,0.0005987248,0.000013027447,0.0000045380384,0.00007491444],"genre_scores_gemma":[0.9199799,0.0000047670533,0.07845198,0.0012808129,0.000015168806,0.00018356844,0.0000067384553,0.000010983143,0.00006611801],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996788,0.0023507744,0.0003625109,0.00024068523,0.00004806214,0.00020994688],"domain_scores_gemma":[0.9993512,0.0002921013,0.00006135497,0.00021870289,0.00003936144,0.000037300902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010777035,0.000114243165,0.0003231979,0.00022925698,0.000011025187,0.0000060623856,0.00008615315,0.0001627643,0.00029188217],"category_scores_gemma":[0.00053254754,0.00008543045,0.000039853065,0.00034121313,0.000118956326,0.000023761086,0.00006378777,0.00010471282,0.0000067714222],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0020061615,0.000064098575,0.031257156,0.000014601758,0.00000608978,0.00003978741,0.00053162867,0.000008232288,0.9648313,0.0001771562,0.000034421726,0.0010293829],"study_design_scores_gemma":[0.0007730397,0.00022423716,0.09914875,0.000041828735,0.0000055989312,0.000010311271,0.00010617131,0.000017733531,0.89819914,0.0007602878,0.000630198,0.00008270506],"about_ca_topic_score_codex":0.0009814334,"about_ca_topic_score_gemma":0.00037969818,"teacher_disagreement_score":0.0678916,"about_ca_system_score_codex":0.00005249766,"about_ca_system_score_gemma":0.00007458462,"threshold_uncertainty_score":0.3483753},"labels":[],"label_agreement":null},{"id":"W3101689081","doi":"10.1007/978-1-0716-0935-4_11","title":"Monitoring Enzymatic RNA G-Quadruplex Unwinding Activities by Nuclease Sensitivity and Reverse Transcription Stop Assays","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"RNA; Helicase; Nuclease; Nucleotide; Transcription (linguistics); G-quadruplex; RNA Helicase A; Computational biology; Nuclease protection assay; Chemistry; Biology; Non-coding RNA; DNA; Cell biology; Biochemistry; Biophysics; Gene","score_opus":0.027198854138062886,"score_gpt":0.3198318708332584,"score_spread":0.29263301669519554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3101689081","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016003108,0.00824926,0.96016383,0.0003864558,0.0007536121,0.0009575146,0.00018540381,0.00006411972,0.013236687],"genre_scores_gemma":[0.11073055,0.0050872946,0.8641335,0.0014637994,0.0008317677,0.00015002702,0.0004508241,0.0004788827,0.01667338],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99690074,0.0012052088,0.00044534163,0.00093869964,0.00013342961,0.00037661236],"domain_scores_gemma":[0.99896526,0.0001400182,0.00026201093,0.00045027063,0.000032252537,0.00015016588],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012959547,0.00054897886,0.00071104226,0.00014756575,0.00009342081,0.000034284458,0.00018571586,0.0010831043,0.000034325705],"category_scores_gemma":[0.00027240024,0.0005957823,0.00022527321,0.000043247353,0.00019645001,0.0000072259977,0.00017489617,0.00048079604,0.0000047491217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000917049,0.0000145293825,0.000019289735,0.00009883672,0.00013009539,0.000063451596,0.00007119765,0.000003901295,0.9622526,0.0032116622,0.000058837086,0.033983894],"study_design_scores_gemma":[0.00037278648,0.00027348744,0.0000053544395,0.0001643164,0.00010408505,0.000034057757,0.00007384295,0.00003944964,0.9705641,0.007013194,0.020738358,0.00061693025],"about_ca_topic_score_codex":0.000025039497,"about_ca_topic_score_gemma":0.0000038903486,"teacher_disagreement_score":0.09603036,"about_ca_system_score_codex":0.000055089833,"about_ca_system_score_gemma":0.00005670861,"threshold_uncertainty_score":0.99964935},"labels":[],"label_agreement":null},{"id":"W3103438531","doi":"10.1007/978-1-0716-0880-7_21","title":"Biotin-Based Proximity Labeling of Protein Complexes in Planta","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Agriculture and Agri-Food Canada","funders":"","keywords":"Biotinylation; Proteome; Biotin; Biochemistry; Protein Data Bank (RCSB PDB); Protein–protein interaction; Proteomics; Chemistry; Computational biology; Yeast; Interactome; Biology; Cell biology; Gene","score_opus":0.029585260540291602,"score_gpt":0.34194765210546324,"score_spread":0.31236239156517165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3103438531","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00848838,0.07812377,0.53781176,0.003188696,0.0013839294,0.0073100594,0.00092965976,0.0001558822,0.3626079],"genre_scores_gemma":[0.007588258,0.0010294722,0.9822451,0.0008352301,0.00015435611,0.00007386447,0.00071151566,0.0001675215,0.0071947007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975191,0.00051965826,0.00071940286,0.00080571236,0.00009689304,0.0003392742],"domain_scores_gemma":[0.99902564,0.00006141554,0.0003357142,0.00044247342,0.000072686096,0.00006205891],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007089391,0.00045284274,0.0008534573,0.00023270835,0.0000302457,0.0000052197533,0.00037952364,0.0013797248,0.000021257769],"category_scores_gemma":[0.0003010542,0.00041904624,0.00022537078,0.000094610514,0.00042077177,9.790562e-7,0.00031794258,0.00070186635,0.0000038909047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016676623,0.00005248654,0.00029348777,0.00020733928,0.00015333826,0.00004472035,0.00002027586,0.000040805447,0.9815523,0.014803511,0.000031008887,0.0026339402],"study_design_scores_gemma":[0.0012556657,0.00068520143,0.00003155965,0.000415065,0.000054651427,0.0000085163,0.000014561815,0.00011013974,0.9293965,0.0095076235,0.05784931,0.0006711818],"about_ca_topic_score_codex":0.000030072055,"about_ca_topic_score_gemma":0.000056801236,"teacher_disagreement_score":0.44443333,"about_ca_system_score_codex":0.00002872084,"about_ca_system_score_gemma":0.00014162096,"threshold_uncertainty_score":0.9999167},"labels":[],"label_agreement":null},{"id":"W3104851609","doi":"10.1007/978-1-0716-0810-4_12","title":"Experimental Competitive Bone Marrow Transplant Assays","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Canadian Institutes of Health Research","keywords":"Bone marrow; Haematopoiesis; Bone marrow transplant; Hematopoietic stem cell; Peripheral blood; Stem cell; Medicine; Bone marrow transplantation; Immunology; Biology; Cell biology","score_opus":0.035965684351790275,"score_gpt":0.38325275049866375,"score_spread":0.3472870661468735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3104851609","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.057072613,0.0007917952,0.9302047,0.0017670434,0.000121219025,0.00041175613,0.000017270335,0.0000579768,0.00955562],"genre_scores_gemma":[0.43769282,0.00002173391,0.5600528,0.0020643729,0.0000310942,0.00003410496,0.000067616136,0.000020041258,0.000015375766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982048,0.00075649284,0.0003276257,0.00036491474,0.000094437724,0.00025169636],"domain_scores_gemma":[0.9994716,0.0001700824,0.000046290275,0.00014984694,0.000022853463,0.00013929972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044107894,0.00016253348,0.00043339567,0.00008205185,0.000018271021,0.000004108608,0.00007896125,0.00017144057,0.0002655087],"category_scores_gemma":[0.00008035794,0.00015102977,0.0000994747,0.00018759562,0.000104931576,0.000013560348,0.000017228229,0.00023079352,0.000029983652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020366338,0.00007560077,0.0030748667,0.00007414631,0.00003572916,0.0006117148,0.0012510072,0.0000032539194,0.98576176,0.0079723755,0.000008344878,0.0009275127],"study_design_scores_gemma":[0.0017986796,0.00044570104,0.0006280469,0.00006336109,0.000048352136,0.00022724984,0.00033863177,0.00041664843,0.99444544,0.00025094504,0.0011834018,0.00015353266],"about_ca_topic_score_codex":0.000012914438,"about_ca_topic_score_gemma":9.941703e-7,"teacher_disagreement_score":0.3806202,"about_ca_system_score_codex":0.000036427056,"about_ca_system_score_gemma":0.000040767798,"threshold_uncertainty_score":0.61588156},"labels":[],"label_agreement":null},{"id":"W3105188239","doi":"10.1007/978-1-0716-0822-7_15","title":"Tn-Core: Functionally Interpreting Transposon-Sequencing Data with Metabolic Network Analysis","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Transposable element; Computational biology; Core (optical fiber); Biology; Genetics; Computer science; Telecommunications; Gene; Genome","score_opus":0.02812739561658595,"score_gpt":0.3172937051360685,"score_spread":0.2891663095194826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3105188239","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041077362,0.011135658,0.97975266,0.0001678514,0.00054140337,0.0003245017,0.00016218313,0.000048394886,0.0074565955],"genre_scores_gemma":[0.0035588853,0.0013548159,0.9803121,0.00087321486,0.001442144,0.000032048105,0.0055852225,0.00017917914,0.006662356],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968786,0.0003020441,0.00062666996,0.0016196618,0.00013130879,0.00044170962],"domain_scores_gemma":[0.99805236,0.000029869572,0.00029210016,0.0014073772,0.00010513266,0.00011314309],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012843087,0.00058828405,0.0009978045,0.00028549758,0.000058961865,0.000023576968,0.0007721339,0.00075277523,0.00006285237],"category_scores_gemma":[0.00022157773,0.0005319277,0.00029990642,0.00036458857,0.00017634063,0.000004924401,0.0003569627,0.00065876445,0.00000577159],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019128183,0.0000112136895,0.00015732483,0.00004387808,0.0026569807,0.000031421252,0.000023030474,0.0061861575,0.96936995,0.010345095,0.00015659674,0.010827091],"study_design_scores_gemma":[0.0009616986,0.00067805254,0.000099292316,0.00021236409,0.004528854,0.0001426682,0.000020280911,0.0023509304,0.112767756,0.0041837078,0.87184316,0.0022112601],"about_ca_topic_score_codex":0.00003478244,"about_ca_topic_score_gemma":0.0000933059,"teacher_disagreement_score":0.8716865,"about_ca_system_score_codex":0.00003323405,"about_ca_system_score_gemma":0.00016240551,"threshold_uncertainty_score":0.99971324},"labels":[],"label_agreement":null},{"id":"W3105369299","doi":"10.1007/978-1-0716-1028-2_8","title":"Murine Limb Bud Organ Cultures for Studying Musculoskeletal Development","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Knee injuries and reconstruction techniques","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Limb bud; Limb development; Biology; Progenitor cell; Apical ectodermal ridge; Fibroblast growth factor; Wnt signaling pathway; Cell biology; Embryonic stem cell; Zone of polarizing activity; Anatomy; Progenitor; Regeneration (biology); Stem cell; Embryogenesis; Embryo; Signal transduction; Genetics; Gene; Ectoderm","score_opus":0.034266313356590805,"score_gpt":0.43949326661122234,"score_spread":0.40522695325463154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3105369299","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.102269106,0.00044125703,0.8940878,0.0018962073,0.00016273375,0.0006043901,0.0000025576226,0.00011848945,0.00041744852],"genre_scores_gemma":[0.02132095,0.00003621285,0.97706175,0.0012602063,0.00011093802,0.000109078566,0.000024631541,0.000022529415,0.000053684387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99881756,0.0002015792,0.00038194124,0.0003215927,0.000050986855,0.00022631107],"domain_scores_gemma":[0.9995595,0.00007176771,0.00007716815,0.00013266632,0.00006721102,0.00009168703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004891401,0.00014832878,0.00041150616,0.00010355725,0.000051215353,0.000006408843,0.000098058495,0.00017172132,0.000053116444],"category_scores_gemma":[0.00032172524,0.00011425358,0.00012860874,0.0001815269,0.00009497382,0.0000124575845,0.00008921721,0.0001927513,0.0000025406928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012839679,0.00005854742,0.0035842601,0.0001603276,0.00010354112,0.00001737425,0.00036898555,0.0000012297984,0.78552806,0.0019408821,0.00011827936,0.20799012],"study_design_scores_gemma":[0.0009803914,0.0009117855,0.000830928,0.00002763954,0.000041367082,0.000042003983,0.00029390573,0.000045803605,0.9059688,0.0010982995,0.08956294,0.00019616072],"about_ca_topic_score_codex":0.0000049890987,"about_ca_topic_score_gemma":0.0000015250439,"teacher_disagreement_score":0.20779397,"about_ca_system_score_codex":0.00003600078,"about_ca_system_score_gemma":0.000063422776,"threshold_uncertainty_score":0.46591255},"labels":[],"label_agreement":null},{"id":"W3106491566","doi":"10.1007/978-1-0716-0935-4_21","title":"A Cell-Free System for Investigating Human MARF1 Endonuclease Activity","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Endoribonuclease; Endonuclease; RNA; Oligonucleotide; Recombinant DNA; Cell; Chemistry; Biology; Biochemistry; Molecular biology; Cell biology; Enzyme; DNA; Gene","score_opus":0.04770927315735255,"score_gpt":0.40007013864823526,"score_spread":0.3523608654908827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3106491566","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4736446,0.00028776255,0.5246363,0.00040644637,0.000048493795,0.00036779372,0.000021779078,0.000021681648,0.00056511833],"genre_scores_gemma":[0.5090929,0.000007674008,0.4896139,0.0008388229,0.00014236414,0.00013609356,0.000049580303,0.00004218334,0.00007648224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99751115,0.001026133,0.00027362324,0.0006179661,0.00007763763,0.000493499],"domain_scores_gemma":[0.9990276,0.00008573574,0.00010845303,0.00049019617,0.00006043248,0.00022756286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009865453,0.0002059473,0.00031054672,0.00006795462,0.000104448576,0.000021992146,0.0005066011,0.00025818663,0.000005152039],"category_scores_gemma":[0.001487678,0.00020484523,0.0001550634,0.00016742146,0.00013004105,0.0000029959524,0.00041332698,0.00022205684,0.0000023666553],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008373394,0.000026165853,0.0009304461,0.00015230889,0.000027333672,0.000013744442,0.000028464934,0.000037184025,0.99409735,0.0009903238,0.0002458118,0.0033671055],"study_design_scores_gemma":[0.0013063009,0.00061587326,0.00010322126,0.000014993165,0.000012005608,0.0000062310646,0.00007730696,0.0017052195,0.99244726,0.00047243465,0.0030165866,0.00022257432],"about_ca_topic_score_codex":0.000077475,"about_ca_topic_score_gemma":0.000008470967,"teacher_disagreement_score":0.035448287,"about_ca_system_score_codex":0.000030743737,"about_ca_system_score_gemma":0.00007632277,"threshold_uncertainty_score":0.8353346},"labels":[],"label_agreement":null},{"id":"W3107069133","doi":"10.1007/978-1-0716-1001-5_17","title":"Assessment of Lung Eosinophils In Situ Using Immunohistological Staining","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Staining; Eosinophil; Pathology; H&E stain; Lung; Antibody; Granule (geology); Eosin; Biology; Chemistry; Immunology; Medicine; Internal medicine; Asthma","score_opus":0.053659007470858146,"score_gpt":0.47162061537114364,"score_spread":0.41796160790028547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107069133","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55134857,0.0014501044,0.44616824,0.00018098648,0.000040315623,0.00015759721,0.000001475532,0.000010182507,0.0006424949],"genre_scores_gemma":[0.5912111,0.000008242138,0.408065,0.0006828037,0.000014669474,0.0000055619307,0.000004390451,0.0000072449834,0.0000010397309],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99797887,0.0010797208,0.00038719203,0.00026985773,0.000069350775,0.00021499662],"domain_scores_gemma":[0.9995125,0.00012458579,0.000094866504,0.00015652963,0.00003279535,0.000078744364],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000571791,0.000116398216,0.0004913135,0.00013646777,0.000014559214,0.0000020770951,0.000092172704,0.00015759954,0.000035077064],"category_scores_gemma":[0.0005334864,0.000096399686,0.00009184654,0.00029351417,0.00014516602,0.000011925639,0.00009358781,0.00025209616,3.4160524e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006252599,0.00007891695,0.11766707,0.00005911271,0.000017363844,0.00026992382,0.00008252116,0.00014436647,0.8750431,0.00080114865,0.0000011584802,0.0057728267],"study_design_scores_gemma":[0.0077802083,0.0033369164,0.53779376,0.00046250917,0.00027852348,0.000104314866,0.0012418502,0.03851923,0.40437433,0.0027067258,0.0025289226,0.0008727475],"about_ca_topic_score_codex":0.000013953577,"about_ca_topic_score_gemma":5.8975644e-7,"teacher_disagreement_score":0.47066873,"about_ca_system_score_codex":0.00007650965,"about_ca_system_score_gemma":0.00015953148,"threshold_uncertainty_score":0.39310652},"labels":[],"label_agreement":null},{"id":"W3107383851","doi":"10.1007/978-1-0716-1201-9_17","title":"Root System Phenotying of Soil-Grown Plants via RGB and Hyperspectral Imaging","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant nutrient uptake and metabolism","field":"Agricultural and Biological Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Global Institute for Water Security; University of Saskatchewan","funders":"","keywords":"Hyperspectral imaging; Remote sensing; Plant root; Root system; Computer science; Environmental science; Biology; Botany; Soil science; Geography","score_opus":0.023711080283257267,"score_gpt":0.2776308238645752,"score_spread":0.25391974358131797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3107383851","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2094851,0.20243973,0.13741706,0.0063911136,0.005215904,0.00431002,0.0028525204,0.00085774047,0.4310308],"genre_scores_gemma":[0.2964265,0.009757232,0.6691252,0.0040500085,0.0039946423,0.00014498671,0.002608847,0.00009224991,0.013800363],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99820745,0.00031239234,0.0004558632,0.00059830426,0.00010618899,0.00031982063],"domain_scores_gemma":[0.9993232,0.00018797023,0.00026105618,0.00009116532,0.000031366817,0.00010526942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005474759,0.00032508853,0.0007941036,0.00005889345,0.000052465304,0.000013926632,0.000284284,0.00034996972,0.000030882733],"category_scores_gemma":[0.000043791144,0.00015385948,0.00015771177,0.000064856846,0.00012397842,0.000024348648,0.0001769962,0.00035645082,0.0000054707925],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040673007,0.000010057896,0.0002393056,0.000033378514,0.00004324306,0.00009951802,0.00004441669,9.585007e-7,0.8343147,0.05508329,0.000027064822,0.11006338],"study_design_scores_gemma":[0.0018875977,0.0008628801,0.0030577076,0.0010592339,0.0005221675,0.00086977886,0.0008416882,0.0009981932,0.2729083,0.1384825,0.5753165,0.0031934343],"about_ca_topic_score_codex":0.00010295736,"about_ca_topic_score_gemma":0.0000352941,"teacher_disagreement_score":0.5752894,"about_ca_system_score_codex":0.000024818455,"about_ca_system_score_gemma":0.0000109099055,"threshold_uncertainty_score":0.6274208},"labels":[],"label_agreement":null},{"id":"W3108004792","doi":"10.1007/978-1-0716-0954-5_3","title":"Whole-Seedling-Based Chemical Genetic Screens in Arabidopsis","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Howard Hughes Medical Institute","keywords":"Arabidopsis; Chemical genetics; Biology; Genetic screen; Arabidopsis thaliana; Computational biology; Forward genetics; Gene; Plant Immunity; Phenotype; Genetics; Small molecule; Mutant","score_opus":0.049105852832981876,"score_gpt":0.3550094079333356,"score_spread":0.3059035551003537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3108004792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9279084,0.00057797943,0.06315821,0.00756313,0.00004923636,0.00035031585,0.000043402502,0.00005371522,0.00029561255],"genre_scores_gemma":[0.6573529,0.000018764275,0.33743542,0.004834978,0.00009237573,0.000065640175,0.00018687859,0.0000041493654,0.000008848914],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99643195,0.0017532691,0.0003814087,0.0007019181,0.0001128254,0.00061865],"domain_scores_gemma":[0.9991186,0.00050376216,0.000064271844,0.00010849526,0.00003608976,0.00016878045],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008275675,0.00021765077,0.0004098767,0.000054521704,0.00003188834,0.000016678909,0.00059591513,0.00040902192,0.000111956964],"category_scores_gemma":[0.0010490847,0.00010678953,0.00012625706,0.0008625358,0.0002094593,0.000014054687,0.00020508941,0.00049105665,0.000040617382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064840606,0.00004995442,0.031817965,0.000005077357,0.000007873215,0.00014134507,0.000015317864,0.0000805917,0.9402852,0.000067823705,0.0000173755,0.027446648],"study_design_scores_gemma":[0.0011584549,0.00081712316,0.07308603,0.00003666596,0.000015705273,0.00003071381,0.00007549256,0.011263371,0.89863396,0.0026538866,0.011452315,0.00077626685],"about_ca_topic_score_codex":0.00012325942,"about_ca_topic_score_gemma":0.00010206717,"teacher_disagreement_score":0.2742772,"about_ca_system_score_codex":0.000034367855,"about_ca_system_score_gemma":0.000027512597,"threshold_uncertainty_score":0.43547505},"labels":[],"label_agreement":null},{"id":"W3109198189","doi":"10.1007/978-1-0716-1064-0_12","title":"Precise Chip-to-Chip Reagent Transfer for Cross-Reactivity-Free Multiplex Sandwich Immunoassays","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University and Génome Québec Innovation Centre","funders":"","keywords":"Multiplex; Analyte; Immunoassay; Chemistry; Reagent; Antibody; Biosensor; Antibody microarray; Chromatography; Molecular biology; Bioinformatics; Biology; Biochemistry; Immunology","score_opus":0.03882759310583143,"score_gpt":0.42068638300686284,"score_spread":0.3818587899010314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3109198189","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.120179616,0.00030584194,0.87661964,0.0013642287,0.00007910042,0.001033159,0.00011853881,0.000055810957,0.00024406277],"genre_scores_gemma":[0.17885801,0.000058781196,0.8186397,0.0016568216,0.00012588108,0.0003643948,0.00018259544,0.000054412812,0.00005942438],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978813,0.00036483209,0.00040052438,0.00084667915,0.0000649764,0.00044170007],"domain_scores_gemma":[0.9987852,0.00010173682,0.00006175108,0.0008002078,0.000097442506,0.00015369011],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00064085104,0.00028620413,0.00035314108,0.00006679247,0.0000940126,0.000021689337,0.0005374479,0.0003730502,0.000006488833],"category_scores_gemma":[0.0011196584,0.0002796533,0.00021605029,0.00023341193,0.00013946017,0.0000035693606,0.00027639038,0.00020856931,0.0000028545887],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030424088,0.00007596121,0.00027002295,0.000017208255,0.00003343867,0.0000024928481,0.000055485925,0.00011142893,0.9761722,0.0011080363,0.00018953868,0.021659963],"study_design_scores_gemma":[0.0009245253,0.0004925184,0.00026769793,0.000008616189,0.000017076507,0.0000069303956,0.000010773593,0.00026643512,0.9061363,0.0043424494,0.08720984,0.00031683774],"about_ca_topic_score_codex":0.000020182038,"about_ca_topic_score_gemma":0.0000160387,"teacher_disagreement_score":0.08702031,"about_ca_system_score_codex":0.000023611417,"about_ca_system_score_gemma":0.000046068224,"threshold_uncertainty_score":0.99996555},"labels":[],"label_agreement":null},{"id":"W3109951924","doi":"10.1007/978-1-0716-1001-5_19","title":"Antibiotic Treatment in an Animal Model of Inflammatory Lung Disease","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Antibiotics; Microbiome; Disease; Allergy; Medicine; Immunology; Lung disease; Intensive care medicine; Biology; Lung; Bioinformatics; Microbiology; Internal medicine","score_opus":0.035780817943185564,"score_gpt":0.3401953989709727,"score_spread":0.3044145810277871,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3109951924","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21528994,0.06552028,0.513931,0.00055947556,0.0039712973,0.00822948,0.01917866,0.00059557066,0.1727243],"genre_scores_gemma":[0.48439148,0.0052746655,0.45058277,0.0019829925,0.0003618415,0.00025863107,0.008159703,0.0009142148,0.048073716],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968485,0.0010595093,0.000761579,0.0008447881,0.000031924534,0.00045369173],"domain_scores_gemma":[0.99881214,0.00013897111,0.00029223543,0.00062506396,0.00005877157,0.00007281672],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045841702,0.00055130286,0.0011600088,0.00043671232,0.00003774013,0.0000044988724,0.00037674617,0.0011638014,0.00006586223],"category_scores_gemma":[0.00015033236,0.0005175303,0.00025602579,0.000068669695,0.00046534516,0.000033535733,0.00018375309,0.000593366,0.0000324542],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005674703,0.00014679601,0.0016444244,0.00014984357,0.00020855956,0.00021211785,0.00031281076,0.0001456416,0.9045289,0.08734517,0.000014350421,0.0047239065],"study_design_scores_gemma":[0.0130003905,0.006953372,0.0023261567,0.0010973775,0.0015177625,0.00008581719,0.0001652982,0.008992811,0.7606643,0.13824143,0.062044628,0.0049106753],"about_ca_topic_score_codex":0.000033899953,"about_ca_topic_score_gemma":0.000050264138,"teacher_disagreement_score":0.26910153,"about_ca_system_score_codex":0.00015630963,"about_ca_system_score_gemma":0.00042826807,"threshold_uncertainty_score":0.9997276},"labels":[],"label_agreement":null},{"id":"W311019972","doi":"10.1007/7651_2015_226","title":"Delivering Antisense Morpholino Oligonucleotides to Target Telomerase Splice Variants in Human Embryonic Stem Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; BC Cancer Agency; Western University","funders":"","keywords":"Morpholino; Telomerase; Oligonucleotide; Embryonic stem cell; Telomerase reverse transcriptase; Biology; splice; RNA splicing; Cell biology; RNA; Gene expression; Gene; Molecular biology; Computational biology; Genetics; Gene knockdown","score_opus":0.046637899731978044,"score_gpt":0.38670425352544835,"score_spread":0.3400663537934703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W311019972","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8539572,0.0011156757,0.14319146,0.00021812526,0.000376557,0.00058155763,0.000011971763,0.00006960643,0.00047790186],"genre_scores_gemma":[0.36438236,0.00008428929,0.63375443,0.0014457107,0.000076114105,0.00003797227,0.00001532517,0.000059856826,0.0001439624],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962541,0.0012686737,0.0006578134,0.00083164545,0.00018307731,0.00080473156],"domain_scores_gemma":[0.9984168,0.00016991356,0.000121079385,0.0007194043,0.00012611721,0.00044667636],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002082061,0.0003685723,0.0008769485,0.000741304,0.000050417304,0.000015522748,0.00031772026,0.0003061316,0.000045783683],"category_scores_gemma":[0.00033870217,0.00036278262,0.00011300875,0.0009022872,0.00014031862,0.000055218294,0.00023786734,0.0004895176,0.00006041775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016171079,0.0001778465,0.014285107,0.000055292763,0.000033637534,0.0024756233,0.0006466072,0.00033818302,0.97314525,0.00034301257,0.000046952653,0.008290779],"study_design_scores_gemma":[0.0026528619,0.00058800686,0.0107429605,0.00017266834,0.000042152416,0.00034327514,0.00038773986,0.0009455454,0.9798267,0.0007483615,0.0029833014,0.0005664588],"about_ca_topic_score_codex":0.001055107,"about_ca_topic_score_gemma":0.00007235402,"teacher_disagreement_score":0.49056295,"about_ca_system_score_codex":0.00021166372,"about_ca_system_score_gemma":0.00016066697,"threshold_uncertainty_score":0.9998824},"labels":[],"label_agreement":null},{"id":"W3110780186","doi":"10.1007/978-1-0716-1119-7_7","title":"MicroRNA In Situ Hybridization in Paraffin-Embedded Human Articular Cartilage and Mouse Knee Joints","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"In situ hybridization; microRNA; In situ; Cartilage; Fixation (population genetics); Articular cartilage; Staining; Pathology; Immunohistochemistry; Biology; Biomedical engineering; Molecular biology; Computational biology; Anatomy; Chemistry; Gene expression; Medicine; Osteoarthritis; Genetics; Gene","score_opus":0.018237076142276334,"score_gpt":0.3385879858925393,"score_spread":0.320350909750263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3110780186","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8577544,0.0010320075,0.14047584,0.00021986534,0.000034648107,0.00037110265,0.0000061679193,0.000013350173,0.000092594644],"genre_scores_gemma":[0.90099704,0.000041718024,0.09803106,0.000633036,0.00003733152,0.00004920476,0.00016502183,0.000033943244,0.000011643234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972524,0.0011401838,0.0004979714,0.0006814448,0.00006328219,0.00036469597],"domain_scores_gemma":[0.9993961,0.000025006759,0.000114278766,0.00031986894,0.000035658468,0.00010913005],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006392108,0.00023498946,0.000337963,0.00017241498,0.000026129852,0.000017507738,0.0001564793,0.00029522734,0.000011447118],"category_scores_gemma":[0.00049540173,0.00026197926,0.00006924623,0.00030978597,0.00012543649,0.0000062811505,0.00019939727,0.00018014103,0.000003440322],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007003471,0.000062169805,0.0066940305,0.00003521034,0.00001251405,0.00004828192,0.000161599,0.0004830381,0.9913662,0.00021040572,0.000018658566,0.00083787844],"study_design_scores_gemma":[0.0012556672,0.00014645344,0.0054836697,0.000016674372,0.000010286179,0.000008149288,0.00004920631,0.00045270642,0.9912953,0.000518093,0.0004964681,0.00026735564],"about_ca_topic_score_codex":0.000022948867,"about_ca_topic_score_gemma":0.000112073874,"teacher_disagreement_score":0.043242622,"about_ca_system_score_codex":0.000040947805,"about_ca_system_score_gemma":0.00004592453,"threshold_uncertainty_score":0.99998325},"labels":[],"label_agreement":null},{"id":"W3112470173","doi":"10.1007/978-1-0716-0997-2_16","title":"Introduction to Population Genomics Methods","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"Agence Nationale de la Recherche","keywords":"Domestication; Genomics; Population genomics; Identification (biology); Data science; Replicate; Informatics; Population; Biology; Computer science; Genome; Ecology; Engineering; Gene; Genetics","score_opus":0.02736356116555512,"score_gpt":0.3696981095472412,"score_spread":0.3423345483816861,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3112470173","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10221833,0.00025680944,0.8935643,0.0031492233,0.00025351802,0.00015784388,0.000009826435,0.000014904669,0.00037522946],"genre_scores_gemma":[0.025481397,0.00004378979,0.9706526,0.0030585744,0.0005217546,0.000010192527,0.00013217471,0.000013966958,0.000085587235],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982524,0.00072242704,0.00022822579,0.0005183457,0.000040041567,0.0002385928],"domain_scores_gemma":[0.9995419,0.000020204447,0.000056800138,0.0002236953,0.000036597656,0.000120818615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000740093,0.00014353657,0.00020998792,0.000072084054,0.000043679487,0.00001425582,0.00019879166,0.000187415,0.000040469004],"category_scores_gemma":[0.0006287166,0.00014661971,0.00007289966,0.00018001096,0.000029376954,0.0000014360338,0.00018653747,0.00010220779,0.00001462811],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005971488,0.000014408553,0.0019082477,0.00000788219,0.000019549409,0.0000020142716,0.000071410686,0.00073797954,0.96521795,0.0005863469,0.00081702543,0.030557461],"study_design_scores_gemma":[0.00033228306,0.00047777029,0.0020833758,0.0000030589347,0.00001732708,0.000010053301,0.00009142136,0.0004310923,0.6505242,0.0010864971,0.3446505,0.00029243864],"about_ca_topic_score_codex":0.00003367237,"about_ca_topic_score_gemma":0.0000033274396,"teacher_disagreement_score":0.34383348,"about_ca_system_score_codex":0.0000137211055,"about_ca_system_score_gemma":0.000019707415,"threshold_uncertainty_score":0.5978978},"labels":[],"label_agreement":null},{"id":"W3113055507","doi":"10.1007/978-1-0716-0381-9_3","title":"The Assessment of Circadian Rhythms Within the Immune System","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont; McGill University; Douglas Mental Health University Institute","funders":"Canadian Institutes of Health Research","keywords":"Circadian rhythm; Immune system; Acquired immune system; Immunology; Biology; Immunity; Antigen; Flow cytometry; Innate immune system; CD8; Neuroscience","score_opus":0.038488897466868184,"score_gpt":0.3782504964279334,"score_spread":0.3397615989610652,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113055507","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07505026,0.0045161922,0.90092653,0.007900673,0.0014201208,0.0009499476,0.000015469099,0.00008079939,0.00914004],"genre_scores_gemma":[0.9155777,0.000044572982,0.08316052,0.001050411,0.000051923947,0.000060636266,9.1863546e-7,0.000020132797,0.00003320107],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99550205,0.0032623203,0.00046269782,0.00036363996,0.000111509165,0.0002977632],"domain_scores_gemma":[0.9982609,0.00095558766,0.00021299194,0.0004770434,0.000021624543,0.00007180812],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019422909,0.0001373194,0.0002818477,0.000044834745,0.00013878905,0.00002106763,0.0004997147,0.00011583411,0.0000062517006],"category_scores_gemma":[0.001231856,0.00008022634,0.00011311196,0.0004652711,0.0003946521,0.00001762144,0.0001475359,0.00038327643,0.000007185435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005106146,0.0000048015145,0.000295317,0.000011297542,0.0000050713684,0.000024685027,0.00019842984,0.00009621812,0.5565539,0.44037846,0.0000016903124,0.002425021],"study_design_scores_gemma":[0.0002829855,0.00010410633,0.0016681427,0.000017864031,0.000011105441,0.00006933918,0.00032816012,0.0075430437,0.9827911,0.0009999749,0.006067668,0.00011649105],"about_ca_topic_score_codex":0.000021960692,"about_ca_topic_score_gemma":0.0000025946956,"teacher_disagreement_score":0.8405274,"about_ca_system_score_codex":0.000041942323,"about_ca_system_score_gemma":0.00010500697,"threshold_uncertainty_score":0.3271535},"labels":[],"label_agreement":null},{"id":"W3113589549","doi":"10.1007/7651_2020_335","title":"Inductive Coculture Differentiation of Induced Pluripotent Stem Cells into Cardiomyocytes","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Induced pluripotent stem cell; Cell biology; Stem cell; Cellular differentiation; Inducer; Biology; Chemistry; Embryonic stem cell; Biochemistry; Gene","score_opus":0.03173683306377139,"score_gpt":0.3557801144961126,"score_spread":0.3240432814323412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3113589549","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6257379,0.0008723713,0.3723626,0.00029925446,0.0001532959,0.00038877217,0.000013745593,0.000011348585,0.0001606654],"genre_scores_gemma":[0.8558091,0.00014170555,0.14344901,0.0002948601,0.000100203615,0.000056501267,0.00007507168,0.00003646091,0.000037101123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966358,0.0016865886,0.0004561083,0.00068929995,0.0001677604,0.00036446186],"domain_scores_gemma":[0.99905837,0.0000486608,0.00018281574,0.0004038697,0.00016951996,0.00013673858],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005185618,0.00025898626,0.00047231358,0.00012226628,0.000036758305,0.0000113723745,0.00044020315,0.00047514954,0.000011997009],"category_scores_gemma":[0.00019282276,0.00023610273,0.00019183208,0.00035493003,0.0001453874,0.000004282354,0.0004357864,0.00031661658,0.000005456952],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012200423,0.000053198353,0.0018824124,0.000065042586,0.00013668825,0.000009850193,0.00025739876,0.00012419453,0.9868293,0.00017544348,0.000029814755,0.010314668],"study_design_scores_gemma":[0.00066433573,0.0005251656,0.00037460853,0.000012004871,0.000023098544,0.0000030479673,0.0002448489,0.00022689535,0.9952231,0.00033302707,0.002138873,0.0002310032],"about_ca_topic_score_codex":0.00007140834,"about_ca_topic_score_gemma":0.0000104439905,"teacher_disagreement_score":0.23007117,"about_ca_system_score_codex":0.00003942833,"about_ca_system_score_gemma":0.000088091496,"threshold_uncertainty_score":0.962799},"labels":[],"label_agreement":null},{"id":"W3119506349","doi":"10.1007/978-1-0716-1032-9_3","title":"Using Models to (Re-)Design Synthetic Circuits","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Synthetic biology; Computer science; Electronic circuit; Gene regulatory network; Stochastic modelling; Theoretical computer science; Synthetic data; Algorithm; Computational biology; Mathematics; Engineering; Gene; Biology; Gene expression","score_opus":0.09142201883717109,"score_gpt":0.3699807417038736,"score_spread":0.27855872286670247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3119506349","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002431326,0.010586967,0.962621,0.000058364178,0.00032092875,0.00048459962,0.000020793097,0.000018858618,0.025645366],"genre_scores_gemma":[0.0019985915,0.00052566227,0.9643512,0.00095743703,0.0002994223,0.000057585094,0.00021820022,0.00026019514,0.031331744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99547106,0.001316282,0.0007346639,0.0016323768,0.00017936522,0.000666269],"domain_scores_gemma":[0.99767166,0.0000840988,0.0002647414,0.0015604175,0.00020029485,0.00021876508],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015000635,0.0007096247,0.0010688511,0.0004408879,0.000067098896,0.00002713974,0.0006251136,0.0015187216,0.00015695892],"category_scores_gemma":[0.00017542615,0.00079309585,0.00054986245,0.00018086261,0.00017200723,0.000002124121,0.00060883426,0.00041365586,0.000014240039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021892174,0.000023879018,0.000005443633,0.00002563699,0.00044427085,0.00010153495,0.000023511977,0.072705425,0.90243953,0.010020535,0.00011912788,0.014069232],"study_design_scores_gemma":[0.00091066246,0.0007007056,0.0000033321878,0.00043647017,0.001020388,0.00023286583,0.000047928952,0.016329939,0.7516787,0.09894171,0.12617485,0.00352245],"about_ca_topic_score_codex":0.000015660811,"about_ca_topic_score_gemma":0.000022858003,"teacher_disagreement_score":0.15076081,"about_ca_system_score_codex":0.000118155935,"about_ca_system_score_gemma":0.00032677548,"threshold_uncertainty_score":0.9997775},"labels":[],"label_agreement":null},{"id":"W3120439033","doi":"10.1007/978-1-0716-1182-1_15","title":"A Murine Model for Chronic A. fumigatus Airway Infections","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Aspergillus fumigatus; Microbiology; Antifungal; Aspergillosis; Cystic fibrosis; Lung; Aspergillus; Biology; Immunology; Medicine; Internal medicine","score_opus":0.03725866763936185,"score_gpt":0.4126315537150922,"score_spread":0.3753728860757303,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3120439033","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006702617,0.0030498144,0.8695117,0.0001632791,0.0003631086,0.000847338,0.00005817936,0.00005040673,0.1258891],"genre_scores_gemma":[0.0004356217,0.00063616363,0.7177133,0.00034037535,0.00020374033,0.00044135508,0.0006062361,0.00011439876,0.2795088],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984449,0.00011971692,0.0004134146,0.00060766924,0.000062697734,0.00035157637],"domain_scores_gemma":[0.9988822,0.00016667409,0.00013110635,0.0005690672,0.0001557954,0.00009516967],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00034765364,0.00037102556,0.0008077638,0.00038164895,0.00007364103,0.0000066959988,0.000068166475,0.000798584,0.00035048326],"category_scores_gemma":[0.0001994601,0.0003395794,0.00045870652,0.00007834405,0.00014424647,0.000011546531,0.000104039995,0.0005254663,0.000018172692],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001736107,0.00080279156,0.00044937155,0.00067313586,0.0029627858,0.0006077743,0.00009826458,0.0013945905,0.06342095,0.7674976,0.00041394058,0.16150516],"study_design_scores_gemma":[0.0123685645,0.0059980736,0.00007537299,0.0012326903,0.003354458,0.0013503863,0.000013346673,0.04906776,0.02768036,0.34093654,0.55587006,0.002052359],"about_ca_topic_score_codex":0.000025683328,"about_ca_topic_score_gemma":0.00006742112,"teacher_disagreement_score":0.55545616,"about_ca_system_score_codex":0.0004479011,"about_ca_system_score_gemma":0.00048177264,"threshold_uncertainty_score":0.99990565},"labels":[],"label_agreement":null},{"id":"W3121611821","doi":"10.1007/978-1-0716-1095-4_2","title":"Functionally Active Eosinophil Purification from Peripheral Blood","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Eosinophilic Disorders and Syndromes","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; University of Alberta; St. Joseph’s Healthcare Hamilton","funders":"Canadian Institutes of Health Research","keywords":"Degranulation; Percoll; Immunomagnetic separation; Flow cytometry; Differential centrifugation; Eosinophil; Peripheral blood; Whole blood; Isolation (microbiology); Centrifugation; Immunology; In vitro; CD16; Chemistry; Biology; Chromatography; Molecular biology; Antigen; Biochemistry; Bioinformatics","score_opus":0.022421670138213022,"score_gpt":0.36918558513751065,"score_spread":0.34676391499929765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3121611821","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5774915,0.00429439,0.4054725,0.0038908923,0.0004209997,0.0002245068,0.000023809427,0.000043866494,0.008137535],"genre_scores_gemma":[0.080025315,0.00017193511,0.9162396,0.002168375,0.0000959368,0.000056789435,0.00040627664,0.000027064292,0.00080866803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983313,0.0006602044,0.0002575697,0.00045159814,0.00008923352,0.00021010237],"domain_scores_gemma":[0.99928004,0.00012852642,0.000058682857,0.00035617774,0.00011203776,0.000064537126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028146128,0.000140919,0.000348408,0.00008804959,0.00003429359,0.000009909674,0.000077134704,0.00022251396,0.00065407675],"category_scores_gemma":[0.000448206,0.00013262637,0.00011597647,0.00025553396,0.00009821424,0.00002317924,0.000049169706,0.0002385911,0.000009590962],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006960261,0.00030467528,0.0066214926,0.000009838515,0.00016303388,0.0001955435,0.00013143942,0.000005637648,0.944409,0.0070175296,0.000022699167,0.041049518],"study_design_scores_gemma":[0.004977003,0.000689233,0.17415763,0.000080607184,0.00038211982,0.0004206214,0.00055347435,0.00035045337,0.67779917,0.116029374,0.02401782,0.00054247794],"about_ca_topic_score_codex":0.00007257372,"about_ca_topic_score_gemma":0.000015133164,"teacher_disagreement_score":0.51076716,"about_ca_system_score_codex":0.000038456372,"about_ca_system_score_gemma":0.00014994897,"threshold_uncertainty_score":0.71616817},"labels":[],"label_agreement":null},{"id":"W3122434862","doi":"10.1007/978-1-0716-1237-8_21","title":"Regulatory and IgE+ B Cells in Allergic Asthma","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Immunoglobulin E; Immunology; Asthma; Pathogenesis; Regulatory B cells; Medicine; Allergic inflammation; Allergen; Allergy; Antibody; Inflammation; Inhalation; B cell","score_opus":0.016194827310465607,"score_gpt":0.3696808066799009,"score_spread":0.35348597936943527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3122434862","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92445785,0.011839286,0.061308995,0.0003899191,0.00017731937,0.00017029402,0.0000034365146,0.000020386482,0.0016324979],"genre_scores_gemma":[0.24329743,0.0003243763,0.75211567,0.0035742307,0.00007902202,0.00003605437,0.000023023236,0.000038392704,0.0005118257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814934,0.0009893839,0.00023503519,0.0003484377,0.000052785446,0.0002250475],"domain_scores_gemma":[0.9994902,0.00009820032,0.000034757766,0.00024805925,0.000031694246,0.00009708928],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051369605,0.00011877903,0.00032833352,0.00014391332,0.00001507006,0.00000401725,0.000048352245,0.00018815037,0.00008828207],"category_scores_gemma":[0.00023209253,0.00010500422,0.00006347813,0.00022205677,0.00013923776,0.000010591781,0.00008533172,0.0001880125,0.0000043886625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004339478,0.000096302516,0.014960789,0.00004047573,0.000015450236,0.0012676358,0.000056972633,0.000013072634,0.93150884,0.00091247563,0.000027579217,0.051057037],"study_design_scores_gemma":[0.002476094,0.00030796076,0.10053174,0.00011255731,0.000026500764,0.00017723038,0.00028879906,0.00022749917,0.8308891,0.0041326117,0.06052551,0.00030438276],"about_ca_topic_score_codex":0.00000871666,"about_ca_topic_score_gemma":0.000012026458,"teacher_disagreement_score":0.6908066,"about_ca_system_score_codex":0.000027636097,"about_ca_system_score_gemma":0.00012187194,"threshold_uncertainty_score":0.4281948},"labels":[],"label_agreement":null},{"id":"W3123255347","doi":"10.1007/978-1-60327-164-6","title":"Bacteriophages","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":267,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Geography","score_opus":0.01373914333118821,"score_gpt":0.358796383308268,"score_spread":0.3450572399770798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123255347","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019194346,0.00040288715,0.16155405,0.00017181417,0.0004500864,0.00028133817,0.000016678925,0.000045275785,0.8368859],"genre_scores_gemma":[0.000017417806,0.00010447316,0.5618935,0.0012109366,0.00006243992,0.000016454282,0.00008515046,0.000036772668,0.43657285],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99818987,0.0004900161,0.00035449487,0.00056470674,0.000049366223,0.00035155212],"domain_scores_gemma":[0.99925405,0.00009039209,0.0001513236,0.00043304486,0.0000056100985,0.000065576816],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004293701,0.00030485276,0.00044051767,0.00010840521,0.000036963163,0.00002020302,0.00038154697,0.00057219784,0.006046949],"category_scores_gemma":[0.00006446247,0.00029584937,0.00017700432,0.00009613238,0.00021139586,0.00003798084,0.00027243549,0.0005755148,0.00054604956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006433392,0.000028343065,0.0000135765995,0.0000047588424,0.000014346305,0.00006379894,0.000026166443,0.000007278913,0.89394844,0.00045909054,0.004858715,0.10056905],"study_design_scores_gemma":[0.00014950681,0.00011588261,0.0011681449,0.000035249355,0.000026037289,0.000047788068,0.000001683702,0.0000067821684,0.020328872,0.01961555,0.95813245,0.00037204992],"about_ca_topic_score_codex":0.00007639682,"about_ca_topic_score_gemma":0.000056179237,"teacher_disagreement_score":0.9532737,"about_ca_system_score_codex":0.0003351963,"about_ca_system_score_gemma":0.00002973124,"threshold_uncertainty_score":0.99994934},"labels":[],"label_agreement":null},{"id":"W3123680045","doi":"10.1007/978-1-0716-1095-4_1","title":"Molecular Biology of Eosinophils: Introduction","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Eosinophil; Function (biology); Immunology; Cell function; Effector; Biology; Neuroscience; Cell biology; Cell; Genetics","score_opus":0.023699482401724155,"score_gpt":0.385846393960198,"score_spread":0.36214691155847384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3123680045","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002587404,0.06400142,0.8522692,0.0017918422,0.0016065275,0.0009670956,0.00009119971,0.000081543985,0.0766038],"genre_scores_gemma":[0.0017983309,0.0016718924,0.9573952,0.0036774362,0.0014942576,0.00008921194,0.0013914473,0.0003094111,0.032172803],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99712306,0.00079162035,0.0007649048,0.0008649299,0.00011448214,0.00034097937],"domain_scores_gemma":[0.99830097,0.00012011389,0.00034312662,0.0008656913,0.00023858859,0.00013150551],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00061678,0.00043839272,0.0013384523,0.0005539989,0.000022888069,0.0000039543,0.00018659458,0.0011821751,0.0005910254],"category_scores_gemma":[0.0006040996,0.00039660494,0.00047739904,0.00012625295,0.0005563295,0.000010685556,0.00018545944,0.0006455198,0.000012141923],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009683042,0.000076694814,0.00015403448,0.00017742805,0.00023769365,0.00044745632,0.000011283461,0.000009715256,0.77653915,0.16037673,0.000098532204,0.061774433],"study_design_scores_gemma":[0.0013546164,0.0013018125,0.00008977739,0.0003337222,0.00060549943,0.00023943273,0.000024675983,0.000020490941,0.38804537,0.08262697,0.52467024,0.00068736204],"about_ca_topic_score_codex":0.000008318907,"about_ca_topic_score_gemma":0.0000010120934,"teacher_disagreement_score":0.5245717,"about_ca_system_score_codex":0.00008325732,"about_ca_system_score_gemma":0.00029588927,"threshold_uncertainty_score":0.9998486},"labels":[],"label_agreement":null},{"id":"W3124732683","doi":"10.1007/978-1-0716-1142-5_5","title":"Detection of Plasma Membrane Phosphoinositide Dynamics Using Genetically Encoded Fluorescent Protein Probes","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Phosphatidylinositol; Cell biology; Chemistry; Fluorescence microscope; Dephosphorylation; Total internal reflection fluorescence microscope; Phosphorylation; Phosphatidylinositol 4,5-bisphosphate; Kinase; Cell; Cell membrane; Membrane; Biophysics; Phosphatase; Fluorescence; Biochemistry; Biology","score_opus":0.015043279925955402,"score_gpt":0.29271118408408103,"score_spread":0.27766790415812564,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124732683","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.070300244,0.0029218895,0.9219828,0.000016954655,0.00024184698,0.00074441876,0.000055022752,0.000013347792,0.0037234544],"genre_scores_gemma":[0.03167539,0.0010835681,0.9518635,0.00008917912,0.00019248703,0.00007905188,0.006477937,0.00023457478,0.008304299],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99743074,0.0003846267,0.00078335195,0.00087346416,0.00015806632,0.00036977825],"domain_scores_gemma":[0.99873275,0.000022781103,0.00033241435,0.0006256636,0.00019960353,0.000086787906],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0006090024,0.00047873004,0.00070812,0.00019971107,0.00004200001,0.000011384343,0.00027389178,0.0013541639,0.000056623718],"category_scores_gemma":[0.000104185514,0.00052114046,0.0003771753,0.00008015259,0.00028114667,0.0000020524685,0.00015932416,0.00042875414,0.0000012458063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017197398,0.000046837667,0.000036566395,0.00016520402,0.00015286444,0.00005820874,0.000012366865,0.00017596128,0.9832934,0.006797103,1.6945057e-7,0.009089313],"study_design_scores_gemma":[0.00052067614,0.00034580685,0.000007052987,0.00017734579,0.000116405376,0.00004528727,0.000008837015,0.002653304,0.9895383,0.0021015098,0.003998712,0.0004867396],"about_ca_topic_score_codex":0.000055404784,"about_ca_topic_score_gemma":0.00023809141,"teacher_disagreement_score":0.03862485,"about_ca_system_score_codex":0.00009412132,"about_ca_system_score_gemma":0.00021125942,"threshold_uncertainty_score":0.9999423},"labels":[],"label_agreement":null},{"id":"W3124942872","doi":"10.1007/978-1-0716-1068-8_17","title":"Prediction of Rice Transcription Start Sites Using TransPrise: A Novel Machine Learning Approach","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"","keywords":"Computer science; Source code; Annotation; Genome; Code (set theory); Graphics processing unit; Eukaryotic transcription; Transcription (linguistics); Set (abstract data type); Machine learning; Artificial intelligence; Computational biology; Data mining; Parallel computing; Promoter; Biology; Programming language; Gene; Genetics","score_opus":0.06298971881700056,"score_gpt":0.3192706307607554,"score_spread":0.25628091194375485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3124942872","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.020311022,0.026608532,0.943196,0.000015928019,0.00020411403,0.00035226464,0.00038963184,0.0000065315794,0.008915963],"genre_scores_gemma":[0.016910955,0.0028829372,0.9719176,0.00009290316,0.00016908058,0.000030370637,0.0015610701,0.00012641557,0.006308621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979729,0.00033599779,0.00057791936,0.0007408982,0.00009655764,0.0002757444],"domain_scores_gemma":[0.99915224,0.00003337176,0.00025381017,0.00037588322,0.0001352556,0.000049407634],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006898867,0.00039193948,0.00063481287,0.00017200554,0.000056432862,0.000007628653,0.00019650764,0.0007663441,0.000018690374],"category_scores_gemma":[0.00007939391,0.000415068,0.00030817132,0.00006867697,0.00018778548,6.8192566e-7,0.000109753986,0.0003955426,3.1829802e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006210004,0.00005601817,0.00023695151,0.00014189268,0.0003076346,0.000003537617,0.00010066786,0.00130682,0.99505496,0.0014101957,0.0000021907786,0.0013170205],"study_design_scores_gemma":[0.0026069076,0.0012947925,0.00026604754,0.00017036432,0.0007557403,0.00012362165,0.00014764567,0.0061245407,0.90390235,0.003649295,0.07961255,0.001346156],"about_ca_topic_score_codex":0.00005330645,"about_ca_topic_score_gemma":0.000012684819,"teacher_disagreement_score":0.09115263,"about_ca_system_score_codex":0.000030666153,"about_ca_system_score_gemma":0.00008603991,"threshold_uncertainty_score":0.9998301},"labels":[],"label_agreement":null},{"id":"W3131627068","doi":"10.1007/978-1-0716-1103-6_13","title":"Accurate Imputation of Untyped Variants from Deep Sequencing Data","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Université Laval","funders":"","keywords":"Imputation (statistics); Genome-wide association study; Genotyping; Genetic association; Computational biology; Computer science; Data mining; 1000 Genomes Project; Single-nucleotide polymorphism; Biology; Genetics; Missing data; Genotype; Machine learning; Gene","score_opus":0.1309938764575785,"score_gpt":0.4905022598170027,"score_spread":0.35950838335942414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131627068","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004944466,0.53288454,0.4663161,0.000009593169,0.00023988777,0.00019879972,0.00021335862,0.0000039730576,0.000084265295],"genre_scores_gemma":[0.000015227356,0.55133015,0.44104654,0.0000650026,0.00008440932,0.000031431555,0.0073775956,0.00003419225,0.000015420346],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99152774,0.0056193387,0.0012041642,0.0011667813,0.00007021591,0.0004117918],"domain_scores_gemma":[0.99684983,0.0004886148,0.000857252,0.0016157567,0.00012427907,0.00006428438],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0024109664,0.000408319,0.0018750249,0.00016868567,0.00003453244,0.000010855206,0.0009410049,0.0013010753,0.000041682135],"category_scores_gemma":[0.0037792737,0.000381719,0.00030316407,0.00036835266,0.00011753756,0.0000029816947,0.0009982381,0.00034535257,0.0000049125447],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000071657973,0.00004734202,0.00012680459,0.0004986139,0.0007274122,0.000024667537,0.000029740879,0.00017315248,0.029730814,0.0002103064,0.00008322207,0.96834075],"study_design_scores_gemma":[0.001018458,0.0003537973,0.00014229091,0.0019139382,0.00173473,0.000090623456,0.00017160526,0.0026456006,0.0029119872,0.0051822034,0.9821797,0.0016550418],"about_ca_topic_score_codex":0.00021287476,"about_ca_topic_score_gemma":0.00006984247,"teacher_disagreement_score":0.9820965,"about_ca_system_score_codex":0.0000686158,"about_ca_system_score_gemma":0.00064257823,"threshold_uncertainty_score":0.99999547},"labels":[],"label_agreement":null},{"id":"W3131687467","doi":"10.1007/978-1-0716-1246-0_8","title":"Use of Virus-Mimicking Nanoparticles to Investigate Early Infection Events in Upper Airway 3D Models","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Carraresi Foundation","keywords":"Virus; In vitro; Pathogen; Virulence; Coronavirus; Airway; Biology; Pandemic; Coronaviridae; Virology; Disease; Microbiology; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Medicine; Gene; Pathology; Genetics","score_opus":0.10901906258899544,"score_gpt":0.4103789261570654,"score_spread":0.30135986356807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3131687467","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7517237,0.00009449523,0.2476777,0.00010745225,0.0001314149,0.00015300371,0.0000011931969,0.00002470024,0.00008634813],"genre_scores_gemma":[0.53522164,0.00000726239,0.46310472,0.0016070614,0.000011874492,0.00002129146,0.0000020321004,0.000015404039,0.000008732162],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977798,0.0011413457,0.00041431165,0.00033103453,0.00007942026,0.00025411628],"domain_scores_gemma":[0.9992825,0.00022905125,0.000080116326,0.00025058168,0.000104076375,0.00005369463],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086235907,0.00012713998,0.0003381634,0.00036033135,0.00001975685,0.0000074290965,0.000047558886,0.00017607759,0.000007872079],"category_scores_gemma":[0.0031318138,0.0001278161,0.00006927754,0.0007807411,0.00005412069,0.00008079109,0.00009907905,0.0002531359,0.000004030807],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044067747,0.00006539228,0.10026238,0.000018658522,0.000018677652,0.000037204787,0.00023904529,0.0006708609,0.88335556,0.0002669528,7.0338245e-7,0.015020506],"study_design_scores_gemma":[0.00056338124,0.0001579069,0.014054743,0.00013718121,0.00001874762,0.000041324838,0.000012237047,0.0054634376,0.97543555,0.0038082583,0.00019775573,0.00010947656],"about_ca_topic_score_codex":0.0010548666,"about_ca_topic_score_gemma":0.0001868712,"teacher_disagreement_score":0.21650209,"about_ca_system_score_codex":0.00006655632,"about_ca_system_score_gemma":0.00007063265,"threshold_uncertainty_score":0.52121896},"labels":[],"label_agreement":null},{"id":"W3133331364","doi":"10.1007/978-1-0716-1008-4_15","title":"Antisense Oligonucleotide Treatment in a Humanized Mouse Model of Duchenne Muscular Dystrophy and Highly Sensitive Detection of Dystrophin Using Western Blotting","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Dystrophin; Duchenne muscular dystrophy; mdx mouse; Exon skipping; Morpholino; Blot; Molecular biology; Transgene; Muscular dystrophy; Exon; Utrophin; Biology; Chemistry; Cell biology; Gene knockdown; Gene; Genetics; Alternative splicing","score_opus":0.024754813247613344,"score_gpt":0.32367799280839027,"score_spread":0.2989231795607769,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3133331364","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8515691,0.0013879157,0.14625964,0.000008116311,0.00006277178,0.0003552236,0.000063605556,0.0000061059955,0.00028750193],"genre_scores_gemma":[0.7867953,0.0010391965,0.21099173,0.00006159957,0.00004791944,0.000020108184,0.0001722138,0.00009957085,0.000772323],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99742407,0.00069078966,0.0007029085,0.000804146,0.00006813304,0.0003099522],"domain_scores_gemma":[0.9988089,0.00006249771,0.0004445846,0.0004973528,0.00013189513,0.00005473033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00041469504,0.0004497985,0.001021342,0.00031201495,0.000034076602,0.0000049410123,0.00011678336,0.0008144763,0.0000020967882],"category_scores_gemma":[0.00013176203,0.00046757748,0.00025525797,0.00006228267,0.00038061215,0.0000036965478,0.00021011666,0.0002476647,1.836366e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033127295,0.00007895914,0.000093633265,0.00009489385,0.00025621496,0.00004230116,0.000081867875,0.0025501747,0.9926718,0.0010162342,7.802963e-8,0.002782584],"study_design_scores_gemma":[0.0016789985,0.00066613464,0.00006758386,0.00010375062,0.00014256428,0.000024083727,0.00004650908,0.0029808297,0.9920085,0.0018287962,0.00005811847,0.0003941221],"about_ca_topic_score_codex":0.0002787511,"about_ca_topic_score_gemma":0.00018148655,"teacher_disagreement_score":0.06477378,"about_ca_system_score_codex":0.00005558469,"about_ca_system_score_gemma":0.00011533298,"threshold_uncertainty_score":0.9997776},"labels":[],"label_agreement":null},{"id":"W3135101823","doi":"10.1007/7651_2021_363","title":"Differentiation of Human Induced Pluripotent Stem Cells (hiPSC) into Endothelial-Type Cells and Establishment of an In Vitro Blood-Brain Barrier Model","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Ottawa","funders":"","keywords":"Induced pluripotent stem cell; In vitro; Cell biology; Blood–brain barrier; Endothelial stem cell; Neuroscience; Biology; Stem cell; Chemistry; Central nervous system; Embryonic stem cell; Biochemistry","score_opus":0.025262472199003346,"score_gpt":0.3481909981780273,"score_spread":0.32292852597902394,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3135101823","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94325936,0.0006781794,0.05546978,0.00004430743,0.00010568534,0.0003386698,0.00004095007,0.0000046951227,0.000058365185],"genre_scores_gemma":[0.8494587,0.00015821916,0.14998972,0.0000888404,0.000018927132,0.0000288084,0.00012613456,0.00003378328,0.00009685299],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957722,0.0022416823,0.0006764379,0.0007334027,0.00017781007,0.00039847978],"domain_scores_gemma":[0.9987654,0.00008358297,0.0002066756,0.0006411514,0.00018551797,0.000117687865],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012799981,0.00025327125,0.0005301491,0.0002829423,0.000032755393,0.00001378798,0.0003139325,0.00042153482,0.000010246125],"category_scores_gemma":[0.00015254901,0.0002602131,0.00010061007,0.00029402497,0.00016084778,0.000007744908,0.0004416889,0.00024774674,3.4991e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015285762,0.00031748,0.00047358268,0.00011687945,0.000067381516,0.000024539588,0.00018406608,0.00057181943,0.9937272,0.000125541,0.0000021870503,0.0042364877],"study_design_scores_gemma":[0.0013139433,0.0005000691,0.00010027641,0.000024305768,0.000026293204,0.0000053302897,0.00014726813,0.003175731,0.99329275,0.0011456859,0.000046575253,0.000221767],"about_ca_topic_score_codex":0.00014729168,"about_ca_topic_score_gemma":0.00008686096,"teacher_disagreement_score":0.09451994,"about_ca_system_score_codex":0.00003343286,"about_ca_system_score_gemma":0.0001679355,"threshold_uncertainty_score":0.999985},"labels":[],"label_agreement":null},{"id":"W3137130539","doi":"10.1007/978-1-0716-1302-3_19","title":"Miniaturized In Vitro Assays to Study Cellular Phenotypic Characteristics: Proliferation, Migration, Invasion, and Anoikis-Resistance","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Anoikis; Phenotype; Cell biology; In vitro; Biology; Genetics; Apoptosis; Programmed cell death","score_opus":0.013077559294794858,"score_gpt":0.3416939957036427,"score_spread":0.3286164364088478,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137130539","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60816675,0.00074347964,0.38946366,0.00071424583,0.00005860765,0.000723511,0.00002106731,0.00001608622,0.0000926095],"genre_scores_gemma":[0.48669872,0.000096969874,0.5111183,0.0010482565,0.000048267917,0.000526013,0.00031709598,0.000028727267,0.0001176602],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963966,0.0015936706,0.0005950931,0.00097127113,0.00007855014,0.0003648309],"domain_scores_gemma":[0.99884444,0.000052985415,0.00012365743,0.00069848506,0.00017514425,0.00010527889],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011296787,0.00028032393,0.00042297223,0.00016784864,0.00007800724,0.00003111535,0.0002490039,0.00035729553,0.000013320704],"category_scores_gemma":[0.0007608146,0.00029077556,0.00006790914,0.0004452293,0.00009141056,0.000003959138,0.00027711934,0.00021898247,0.0000025945476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012738912,0.00028463744,0.009005822,0.00001174037,0.00003221603,0.000042231524,0.00012779525,0.0000025861966,0.9866951,0.0007345196,0.0000449174,0.0028910057],"study_design_scores_gemma":[0.0007917978,0.00018189565,0.006299393,0.000011515897,0.000019772653,0.000011792668,0.0000847757,0.00003079144,0.9819354,0.0018515517,0.008459932,0.00032139185],"about_ca_topic_score_codex":0.0000182125,"about_ca_topic_score_gemma":0.00023567573,"teacher_disagreement_score":0.12165463,"about_ca_system_score_codex":0.000027434611,"about_ca_system_score_gemma":0.000106862615,"threshold_uncertainty_score":0.99995446},"labels":[],"label_agreement":null},{"id":"W3137181410","doi":"10.1007/978-1-0716-0947-7_11","title":"Brief Survey on Machine Learning in Epistasis","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; Krembil Foundation","funders":"","keywords":"Epistasis; Machine learning; Artificial intelligence; Computer science; Genome-wide association study; Chromosome; Gene; Computational biology; Biology; Genetics","score_opus":0.07808675404122073,"score_gpt":0.4625526441932539,"score_spread":0.3844658901520332,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137181410","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009999557,0.92483366,0.07370711,0.00004265117,0.00029210048,0.00037039866,0.00011066764,0.000010489744,0.0005329222],"genre_scores_gemma":[0.00002309753,0.87082034,0.12427023,0.00033382734,0.00006769466,0.00013400076,0.004069878,0.00007756731,0.00020337726],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.978584,0.018335182,0.0011021448,0.0012262755,0.00007476589,0.00067766116],"domain_scores_gemma":[0.9977906,0.00087467383,0.00044945173,0.0007418889,0.000056768633,0.000086663575],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0049795923,0.0005673883,0.0023093796,0.0003872781,0.0000503068,0.000014631738,0.00047655054,0.0015924412,0.0000373244],"category_scores_gemma":[0.0075619426,0.0005352434,0.0005121647,0.0006427778,0.00012440667,8.4625464e-7,0.00039121736,0.0010033883,0.000009106696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015112114,0.00013035761,0.00692027,0.00033601912,0.0002207091,0.000059500537,0.000010629461,0.00015907826,0.0018278547,0.00022926865,0.00013148139,0.9899597],"study_design_scores_gemma":[0.00038498922,0.00030822633,0.0011670621,0.0005754666,0.000076800185,0.000026422622,0.000006509172,0.00003174455,0.00028924705,0.00016160123,0.9963505,0.0006214092],"about_ca_topic_score_codex":0.0006438124,"about_ca_topic_score_gemma":0.00045054939,"teacher_disagreement_score":0.99621904,"about_ca_system_score_codex":0.000088567125,"about_ca_system_score_gemma":0.000328095,"threshold_uncertainty_score":0.9997099},"labels":[],"label_agreement":null},{"id":"W3137531088","doi":"10.1007/978-1-0716-1302-3_7","title":"Purification of Total RNA from Stomach Tissue Biopsies","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Reverse transcriptase; Gastric biopsy; Helicobacter pylori; Stomach; RNA; Molecular biology; Gene; Gastritis; Genetics; Biochemistry","score_opus":0.02586360595087337,"score_gpt":0.38805904230362276,"score_spread":0.36219543635274937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137531088","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72338885,0.00229298,0.27187586,0.0015872192,0.00026817503,0.00013094454,0.000018186158,0.000023475272,0.00041428994],"genre_scores_gemma":[0.2152316,0.00012176266,0.78386045,0.00046586926,0.000043878797,0.000028634377,0.00011658598,0.00001772872,0.00011347748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789095,0.0010221665,0.0004059594,0.00037437113,0.00006428696,0.00024225829],"domain_scores_gemma":[0.99910176,0.00017838502,0.00010542697,0.00040322973,0.0001623503,0.0000488276],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043210757,0.00014293802,0.0005069325,0.00014481586,0.000018527731,0.0000026053842,0.00007607031,0.0002506184,0.00007626749],"category_scores_gemma":[0.0009840322,0.00013391227,0.00006855012,0.00031051695,0.00022268192,0.000014616739,0.000115692346,0.00026626015,0.000008927758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006872895,0.00009807249,0.03623522,0.000014245955,0.00021978388,0.00011833055,0.00021047425,0.0000043365153,0.9392831,0.0002137032,0.000017070179,0.023516985],"study_design_scores_gemma":[0.00091652485,0.00026926992,0.06995677,0.00003093701,0.00009773746,0.000066515495,0.00012954566,0.000049500897,0.9267409,0.00074704876,0.00091460935,0.000080672944],"about_ca_topic_score_codex":0.000087239634,"about_ca_topic_score_gemma":0.000012353743,"teacher_disagreement_score":0.5119846,"about_ca_system_score_codex":0.00003847797,"about_ca_system_score_gemma":0.00005090526,"threshold_uncertainty_score":0.5460784},"labels":[],"label_agreement":null},{"id":"W3137997001","doi":"10.1007/978-1-0716-0947-7_23","title":"Trigenic Synthetic Genetic Array (τ-SGA) Technique for Complex Interaction Analysis","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Auto Workers; University of Toronto; McGill University Health Centre","funders":"","keywords":"Mutant; Genetics; Allele; Biology; Gene; Phenotype; Computational biology; Ploidy; Genetic analysis","score_opus":0.05128410143649882,"score_gpt":0.4232146644836503,"score_spread":0.3719305630471515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3137997001","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020220762,0.0041226777,0.97284395,0.00011647095,0.00025206682,0.001035288,0.0001554921,0.000013949435,0.021257903],"genre_scores_gemma":[0.0021129653,0.0012152165,0.94954526,0.00035708895,0.00027725528,0.0006247039,0.002166771,0.00016554636,0.043535203],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964448,0.0007596293,0.000714253,0.0013496872,0.00016087781,0.00057072524],"domain_scores_gemma":[0.99800855,0.0001651732,0.00026428525,0.0010916111,0.00030021358,0.00017016828],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010606798,0.0005421541,0.00093739684,0.0007050694,0.00007641976,0.000034428387,0.00056149525,0.0012513427,0.00034500667],"category_scores_gemma":[0.00054054626,0.00055598054,0.0009204148,0.00023770386,0.0002570774,0.00000138558,0.0003033333,0.0005142664,0.000009322939],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114174865,0.000044485445,0.000046966004,0.000071358096,0.0010522688,0.000020806574,0.00000722319,0.00019527397,0.98822474,0.0017927241,0.00011376577,0.008316233],"study_design_scores_gemma":[0.00036401843,0.00050420896,0.00002530962,0.00004205223,0.00048109153,0.000044992743,0.000008662503,0.00018298613,0.7818542,0.006940434,0.2089446,0.00060745166],"about_ca_topic_score_codex":0.000015888601,"about_ca_topic_score_gemma":0.00006665989,"teacher_disagreement_score":0.20883085,"about_ca_system_score_codex":0.00008467778,"about_ca_system_score_gemma":0.00026105976,"threshold_uncertainty_score":0.99968916},"labels":[],"label_agreement":null},{"id":"W3138516413","doi":"10.1007/978-1-0716-1302-3_16","title":"Evaluating Host Responses to Helicobacter pylori Using ELISA and Western Blot","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Western blot; Helicobacter pylori; Blot; Antibody; Biology; Molecular biology; Helicobacter pylori infection; Enzyme; Microbiology; Immunology; Biochemistry; Gene","score_opus":0.10336861741038997,"score_gpt":0.4774159318841756,"score_spread":0.3740473144737856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3138516413","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8346293,0.0010798268,0.16062915,0.0029814604,0.0002961301,0.00028374747,0.000007705139,0.000035160698,0.000057503115],"genre_scores_gemma":[0.06318343,0.00008356091,0.9288465,0.00749022,0.00009846336,0.000047618363,0.000013165939,0.000046037465,0.00019101899],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99556595,0.0025728077,0.00049738266,0.0006972536,0.00011198142,0.00055460614],"domain_scores_gemma":[0.9986445,0.0004248914,0.00008677071,0.00045464755,0.00022910538,0.00016010243],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001812502,0.0002657805,0.0006614963,0.0003004712,0.000069858375,0.000017834727,0.00009747302,0.00025983376,0.000027650785],"category_scores_gemma":[0.0036354093,0.00025027973,0.00007534335,0.00042819517,0.00018074925,0.000029278997,0.00042531537,0.00041314977,0.000009427612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024308814,0.000046621542,0.29663643,0.000018331431,0.00015464769,0.00026217022,0.00030781562,0.0000057031943,0.6961201,0.000022377199,0.000003039012,0.0061796927],"study_design_scores_gemma":[0.004749031,0.0024072905,0.47606084,0.0003917544,0.0005364312,0.0018394999,0.00045962728,0.0005213372,0.5081631,0.00035634183,0.0039333706,0.0005814225],"about_ca_topic_score_codex":0.000038192164,"about_ca_topic_score_gemma":0.000029274835,"teacher_disagreement_score":0.7714459,"about_ca_system_score_codex":0.00009848862,"about_ca_system_score_gemma":0.00010694435,"threshold_uncertainty_score":0.99999493},"labels":[],"label_agreement":null},{"id":"W3139054633","doi":"10.1007/978-1-0716-0947-7_12","title":"First-Order Correction of Statistical Significance for Screening Two-Way Epistatic Interactions","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Epistasis; Computer science; Order (exchange); Computational biology; Genetics; Econometrics; Biology; Statistics; Mathematics; Gene; Economics","score_opus":0.03066727607894697,"score_gpt":0.4185840405888,"score_spread":0.387916764509853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3139054633","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017857213,0.0004049234,0.98022276,0.00029361367,0.0005749334,0.00021379512,0.000057247613,0.000006251094,0.00036928343],"genre_scores_gemma":[0.08580927,0.000054216976,0.91304487,0.00027425718,0.00005865214,0.00013330091,0.00032542882,0.00001934304,0.0002806856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976369,0.0011096338,0.0004741118,0.00044377014,0.00003998381,0.00029561433],"domain_scores_gemma":[0.99847084,0.0007531081,0.00018237169,0.00028992115,0.0002551115,0.000048660124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001011606,0.00014298425,0.00034051161,0.000073165356,0.000062884385,0.000004837391,0.000107034975,0.00017197721,0.00004706931],"category_scores_gemma":[0.0041523096,0.00015217504,0.00010689378,0.00020652481,0.00012932844,0.0000018319998,0.000082165585,0.0001329781,0.0000011435134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006827736,0.00009727429,0.010111116,0.000027469057,0.00010626345,0.000003854252,0.000044881337,0.007184496,0.95823556,0.002564063,0.00034151122,0.021215215],"study_design_scores_gemma":[0.0033510951,0.0011244979,0.021025958,0.00007611892,0.00017960052,0.00008191856,0.00079267734,0.07997318,0.79986435,0.022542698,0.07010525,0.0008826388],"about_ca_topic_score_codex":0.0000905449,"about_ca_topic_score_gemma":0.00027674553,"teacher_disagreement_score":0.15837121,"about_ca_system_score_codex":0.000024124729,"about_ca_system_score_gemma":0.00009710343,"threshold_uncertainty_score":0.62055176},"labels":[],"label_agreement":null},{"id":"W3144940706","doi":"10.1007/978-1-0716-1307-8_1","title":"Advanced Design of Structural RNAs Using RNARedPrint","year":2012,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Agence Nationale de la Recherche","keywords":"RNA; Rational design; Computational biology; Computer science; Software; Nucleic acid structure; Biology; Genetics; Programming language","score_opus":0.04845560541314748,"score_gpt":0.3733317654060868,"score_spread":0.32487615999293934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3144940706","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011297124,0.013710941,0.9787253,0.00001140528,0.00043855002,0.0005667426,0.00002748023,0.0000102987615,0.0053795716],"genre_scores_gemma":[0.0033149323,0.0004608634,0.99232155,0.00009358616,0.0001432743,0.000026821492,0.00006514014,0.00011352143,0.0034603185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99740547,0.00077226857,0.00062469393,0.0006432024,0.00011119461,0.0004431653],"domain_scores_gemma":[0.99849063,0.000076122415,0.00047049663,0.00077057537,0.00009931694,0.00009287357],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011278688,0.00048228598,0.00072778814,0.00019184148,0.00003682454,0.000006193529,0.00045710313,0.0011518523,0.00014994339],"category_scores_gemma":[0.0002152354,0.00046745082,0.00026890254,0.000039583905,0.00021285353,0.0000025881623,0.00031596608,0.00028133453,0.000003743026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001137428,0.000008103519,0.000016624575,0.000032830027,0.00011535323,0.000008664731,0.000014284333,0.00035283057,0.9163625,0.0137121165,0.0000020384389,0.069260865],"study_design_scores_gemma":[0.0003129839,0.00028893928,0.0000056225567,0.00007430606,0.000065184795,0.00004299136,0.000005705041,0.00007182438,0.94892555,0.03884933,0.010871237,0.000486334],"about_ca_topic_score_codex":0.000010439393,"about_ca_topic_score_gemma":0.0000014950056,"teacher_disagreement_score":0.06877453,"about_ca_system_score_codex":0.00004276986,"about_ca_system_score_gemma":0.00011404488,"threshold_uncertainty_score":0.99977773},"labels":[],"label_agreement":null},{"id":"W3152678977","doi":"10.1007/978-1-0716-1138-8_29","title":"Changing Health-Related Behaviors 1: Patient-Oriented Research and Patient Engagement in Health Research","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Mental Health and Patient Involvement","field":"Health Professions","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Medicine; Psychology; Health care; Medical education; Political science","score_opus":0.5229535461229161,"score_gpt":0.6094187933992671,"score_spread":0.08646524727635096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152678977","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25388962,0.29789168,0.034229938,0.027425261,0.02356696,0.098945126,0.0017159459,0.0005942243,0.26174128],"genre_scores_gemma":[0.016104791,0.033900574,0.7392446,0.033187952,0.0005692393,0.013530795,0.013331382,0.0014236986,0.14870699],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9496547,0.040147424,0.003749999,0.0017913729,0.001062566,0.0035939158],"domain_scores_gemma":[0.99383116,0.0028770696,0.00091298355,0.0010246834,0.00059799483,0.00075611647],"candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.039338086,0.000571081,0.0015146079,0.0036340882,0.0015154759,0.00001297004,0.00035145346,0.0012545758,0.0006268725],"category_scores_gemma":[0.00061306433,0.0005791866,0.00011583108,0.0010232913,0.00048615574,0.000034987497,0.0015077856,0.008268438,0.00005614285],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005810825,0.0012849978,0.007981053,0.00881129,0.0001489043,0.00089445774,0.07840813,0.0000129375185,0.0017772011,0.37130874,0.0014658517,0.52732533],"study_design_scores_gemma":[0.005259627,0.016544117,0.0003203226,0.027784018,0.000018218081,0.0000225298,0.04301291,0.00012402401,0.0012039124,0.077558465,0.8265051,0.0016467071],"about_ca_topic_score_codex":0.0029813563,"about_ca_topic_score_gemma":0.0010198321,"teacher_disagreement_score":0.8250393,"about_ca_system_score_codex":0.0033892582,"about_ca_system_score_gemma":0.0020602213,"threshold_uncertainty_score":0.9997844},"labels":[],"label_agreement":null},{"id":"W3152803760","doi":"10.1007/978-1-0716-1138-8_24","title":"Evidence-Based Decision Making 4: Clinical Practice Guidelines","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Clinical practice guidelines implementation","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Providence Health Care; University of British Columbia","funders":"","keywords":"Expert opinion; Knowledge translation; Psychological intervention; Clinical Practice; Evidence-based practice; Medicine; Management science; Dissemination; Best practice; Health care; Opinion leadership; Scientific evidence; Risk analysis (engineering); Psychology; Computer science; Alternative medicine; Knowledge management; Intensive care medicine; Nursing; Public relations; Political science; Engineering; Pathology","score_opus":0.6258397201866819,"score_gpt":0.690313349245848,"score_spread":0.0644736290591661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3152803760","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003457564,0.015934655,0.9423113,0.017859565,0.0018416909,0.0008701237,0.0000121938665,0.000061371815,0.021074554],"genre_scores_gemma":[0.000020960239,0.0042689317,0.932685,0.057231847,0.0007999602,0.00003102783,0.00015988384,0.0001213881,0.004680998],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9892398,0.0030300699,0.0052852244,0.0014782584,0.0005265049,0.00044013912],"domain_scores_gemma":[0.9530769,0.040928215,0.0016957407,0.0014210064,0.002701075,0.00017705697],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.02291677,0.00054083124,0.0016571751,0.00043675545,0.000048783993,0.00003594813,0.00033273638,0.0016088465,0.0013286243],"category_scores_gemma":[0.40603587,0.0005036841,0.0007463831,0.0001823484,0.00026165653,0.00011805229,0.00041576172,0.0020083352,0.000078959616],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001218558,0.00012607835,0.00038607031,0.000084504274,0.00025768692,0.001661544,0.0000058011483,0.000040936222,0.0043941597,0.011276407,0.0030406157,0.97750765],"study_design_scores_gemma":[0.0026580805,0.0012396884,0.00016236759,0.0061357967,0.0016598,0.00042982167,0.000055589866,0.0015548717,0.00070081005,0.036788117,0.9478879,0.0007271499],"about_ca_topic_score_codex":0.000033101573,"about_ca_topic_score_gemma":0.000025561752,"teacher_disagreement_score":0.9767805,"about_ca_system_score_codex":0.00024508513,"about_ca_system_score_gemma":0.0014606949,"threshold_uncertainty_score":0.9997415},"labels":[],"label_agreement":null},{"id":"W3153313946","doi":"10.1007/978-1-0716-1138-8_28","title":"Evidence-Based Decision-Making 8: A Primer on Health Policy for Researchers","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Policy Implementation Science","field":"Health Professions","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. John’s Health Sciences Centre; Health Sciences Centre; Memorial University of Newfoundland","funders":"","keywords":"Public policy; Perspective (graphical); Identification (biology); Health policy; Government (linguistics); Variety (cybernetics); Public health; Policy studies; Public relations; Policy analysis; Public health policy; Management science; Political science; Public administration; Computer science; Medicine; Engineering; Nursing","score_opus":0.8172548920417032,"score_gpt":0.7849441316187837,"score_spread":0.03231076042291947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153313946","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019093959,0.0015363053,0.9105687,0.062486403,0.00072423194,0.0037544705,0.0001629682,0.00005236417,0.02069543],"genre_scores_gemma":[0.000044886932,0.0005082826,0.84744626,0.13752353,0.00035576615,0.00081561477,0.000038119815,0.00010833388,0.013159222],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9843036,0.010247001,0.001975928,0.0012579461,0.00049373694,0.0017217849],"domain_scores_gemma":[0.94921464,0.047755595,0.0009864558,0.0011315941,0.00050873635,0.0004029577],"candidate_categories":["metaresearch","metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.024012424,0.0004340705,0.0011214875,0.001639627,0.00057526474,0.000016309808,0.0007458647,0.0009918355,0.00091771537],"category_scores_gemma":[0.061958924,0.0004102173,0.00025458276,0.00047745797,0.00030376978,0.000044614433,0.00035690298,0.0018738465,0.00009441557],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00039452774,0.000022955366,0.00011301002,0.0007778006,0.000041795363,0.000026173324,0.001042191,0.000038616607,0.0017292174,0.46067524,0.004931253,0.5302072],"study_design_scores_gemma":[0.0011527549,0.0008169442,0.00007307073,0.007402621,0.00001229207,0.0000021162957,0.00016084661,0.00017480858,0.00031748254,0.18372306,0.8057038,0.00046017123],"about_ca_topic_score_codex":0.0005445195,"about_ca_topic_score_gemma":0.0003499997,"teacher_disagreement_score":0.80077255,"about_ca_system_score_codex":0.0021999895,"about_ca_system_score_gemma":0.015297251,"threshold_uncertainty_score":0.9999956},"labels":[],"label_agreement":null},{"id":"W3153464370","doi":"10.1007/978-1-0716-1394-8_10","title":"Helical Membrane Protein Crystallization in the New Era of Electron Cryo-Microscopy","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Electron crystallography; Cryo-electron microscopy; Electron microscope; Crystallography; Crystallization; Membrane protein; Chemistry; Resolution (logic); Phospholamban; Protein crystallization; Structural biology; Membrane; Biophysics; Electron diffraction; Endoplasmic reticulum; Physics; Biology; Diffraction; Optics; Biochemistry; Computer science","score_opus":0.011675025313446923,"score_gpt":0.39139599456401364,"score_spread":0.3797209692505667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153464370","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014673845,0.0061955764,0.98341805,0.00039684732,0.000027062517,0.0009816233,0.000023174716,0.000013441922,0.0074768416],"genre_scores_gemma":[0.0012134251,0.002547355,0.9785108,0.00085491646,0.00013212377,0.00023101504,0.0010366385,0.000112146525,0.015361564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779725,0.00041577237,0.0005977387,0.00071371,0.00009524908,0.00038026023],"domain_scores_gemma":[0.99879044,0.000041065097,0.00027103655,0.0007706015,0.0000834184,0.000043463286],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006279417,0.00036071625,0.0005008042,0.00011006118,0.000032503925,0.000012614576,0.0005037617,0.00084323715,0.000039671875],"category_scores_gemma":[0.000122001504,0.00032398952,0.00018382611,0.00015055876,0.00018015887,0.0000022949787,0.00015759045,0.0007340896,0.0000011824957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004550681,0.00004050088,0.0000036883525,0.00002871022,0.000024922207,0.000005555582,0.000014349828,0.000032237644,0.92366254,0.073138624,0.00008608378,0.0029172578],"study_design_scores_gemma":[0.00024794208,0.0002928654,0.000001948141,0.00007364195,0.000017274653,0.000017170398,0.000004210283,0.000005245776,0.834962,0.03233632,0.13179192,0.0002494595],"about_ca_topic_score_codex":0.000026401227,"about_ca_topic_score_gemma":0.00006319336,"teacher_disagreement_score":0.13170584,"about_ca_system_score_codex":0.00005168509,"about_ca_system_score_gemma":0.0002857391,"threshold_uncertainty_score":0.9999212},"labels":[],"label_agreement":null},{"id":"W3153473602","doi":"10.1007/978-1-0716-1138-8_20","title":"Qualitative Research in Clinical Epidemiology","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Policy Implementation Science","field":"Health Professions","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Qualitative research; Management science; Engineering ethics; Research design; Data science; Computer science; Medicine; Sociology; Engineering; Social science","score_opus":0.9883966351706428,"score_gpt":0.9307962602456362,"score_spread":0.05760037492500658,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153473602","genre_codex":"review","genre_gemma":"review","domain_codex":"methods","domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000057317156,0.8226526,0.16893837,0.002939723,0.0013305722,0.002279677,0.000055430828,0.000019684025,0.001778258],"genre_scores_gemma":[8.887934e-8,0.5868524,0.40623698,0.005066674,0.00015347506,0.0014524261,0.00005601284,0.000032686654,0.00014929926],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.38882154,0.6004964,0.006985134,0.0013997797,0.00019354936,0.0021035618],"domain_scores_gemma":[0.69045645,0.30637264,0.0014054358,0.0010985414,0.00034308774,0.00032385119],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.38577807,0.00039963023,0.0058511514,0.001761201,0.00023722304,0.0000037733923,0.001055444,0.0025124452,0.00044970115],"category_scores_gemma":[0.2497608,0.00033368444,0.0004565631,0.0035904385,0.001025036,0.0000309291,0.0010780034,0.008086002,0.00039144256],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004690437,0.000037567937,0.000607695,0.0048207412,0.000030026158,0.0000630045,0.0039402326,1.4841629e-7,0.0000033292647,0.052175753,0.0008936076,0.9374232],"study_design_scores_gemma":[0.000365574,0.000111229536,0.000035219793,0.0050007165,0.000016958087,0.0000052024566,0.0024140154,0.0000037991656,3.7013206e-7,0.026060196,0.9657514,0.0002353113],"about_ca_topic_score_codex":0.0008477271,"about_ca_topic_score_gemma":0.00038711322,"teacher_disagreement_score":0.9648578,"about_ca_system_score_codex":0.0009334894,"about_ca_system_score_gemma":0.0065326714,"threshold_uncertainty_score":0.99991155},"labels":[],"label_agreement":null},{"id":"W3153687727","doi":"10.1007/7651_2021_393","title":"Development of a Blood–Brain Barrier Permeability Assay Using Human Induced Pluripotent Stem Cell Derived Brain Endothelial Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Induced pluripotent stem cell; Blood–brain barrier; Cell biology; Endothelial stem cell; Stem cell; Permeability (electromagnetism); Cell; Biology; In vitro; Chemistry; Neuroscience; Central nervous system; Membrane; Embryonic stem cell; Biochemistry","score_opus":0.04218784464993172,"score_gpt":0.3745847941164068,"score_spread":0.33239694946647513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153687727","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.737333,0.00048054973,0.26131824,0.00007283659,0.00014824893,0.00035986508,0.000033912984,0.000010083557,0.00024328267],"genre_scores_gemma":[0.38753545,0.000015360085,0.6115848,0.00029449383,0.00005286845,0.000052809883,0.00010527611,0.00005929608,0.00029967245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99181396,0.005059034,0.00094094616,0.0011467102,0.00026432393,0.00077501143],"domain_scores_gemma":[0.99816185,0.00020994077,0.00025406334,0.0009257962,0.00025435042,0.00019400648],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003462457,0.00039943104,0.0006300923,0.00020451716,0.00013053353,0.000022141277,0.0005385016,0.0006150511,0.00007149521],"category_scores_gemma":[0.00049140473,0.00041547036,0.00027188394,0.0003386026,0.00024452282,0.0000046678074,0.00083020184,0.00039948252,0.0000034478267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057754798,0.00031392268,0.00075316464,0.00011365784,0.00014705466,0.00007884824,0.00024933252,0.00009422284,0.99384946,0.00004667252,0.000008009279,0.0042879106],"study_design_scores_gemma":[0.0013675152,0.00019110247,0.00014657351,0.000026777714,0.000032408625,0.000028236329,0.00026522714,0.00016782002,0.9944254,0.00014752233,0.002792769,0.00040861533],"about_ca_topic_score_codex":0.000044655364,"about_ca_topic_score_gemma":0.000070690905,"teacher_disagreement_score":0.35026655,"about_ca_system_score_codex":0.00008774534,"about_ca_system_score_gemma":0.00076669746,"threshold_uncertainty_score":0.9998297},"labels":[],"label_agreement":null},{"id":"W3153827318","doi":"10.1007/978-1-0716-1138-8_32","title":"Changing Health-Related Behaviors 4: Realizing Impact of Health Research Through Knowledge Translation","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Policy Implementation Science","field":"Health Professions","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Knowledge translation; Process (computing); Knowledge management; Computer science; Translation (biology); Data science; Chemistry","score_opus":0.8537065985714121,"score_gpt":0.7846022422262411,"score_spread":0.06910435634517098,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153827318","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.001587051,0.02325334,0.77993333,0.013476466,0.0018247208,0.007736355,0.0005689058,0.00016601275,0.17145383],"genre_scores_gemma":[0.0032196713,0.004005109,0.95255727,0.0057771034,0.00029354304,0.00064821716,0.0009785447,0.00036445956,0.032156058],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9567102,0.035110667,0.004252064,0.0011043582,0.00047161814,0.0023510908],"domain_scores_gemma":[0.99003536,0.0062381867,0.0018762425,0.0008879994,0.00065226667,0.00030993964],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.050485566,0.00043215867,0.0017842483,0.001896514,0.00081427634,0.000007694624,0.0004991418,0.0011412298,0.00094548374],"category_scores_gemma":[0.0023405002,0.00042579306,0.00032165312,0.0012097764,0.000436957,0.00007272647,0.00025729658,0.0030111491,0.000042802083],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086680964,0.00013400118,0.0012757664,0.0034642066,0.00024098827,0.000045257373,0.16110866,0.00004143132,0.029555943,0.36651656,0.0021624733,0.43536803],"study_design_scores_gemma":[0.010616148,0.007329026,0.0030676553,0.019519672,0.00014992704,0.0001015069,0.028068531,0.0005715739,0.0037584235,0.32655382,0.59650034,0.0037634003],"about_ca_topic_score_codex":0.004448226,"about_ca_topic_score_gemma":0.0006892543,"teacher_disagreement_score":0.5943379,"about_ca_system_score_codex":0.002289799,"about_ca_system_score_gemma":0.008523104,"threshold_uncertainty_score":0.9999678},"labels":[],"label_agreement":null},{"id":"W3153896970","doi":"10.1007/978-1-0716-1394-8_1","title":"Expression and Purification of Human Mitochondrial Intramembrane Protease PARL","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Protease; Cell biology; Inner mitochondrial membrane; Chemistry; Biology; Mitochondrion; Biochemistry; Enzyme","score_opus":0.025110816732427186,"score_gpt":0.34250060868445986,"score_spread":0.31738979195203265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153896970","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007371119,0.01008802,0.92181593,0.00018464155,0.0020082972,0.0018091562,0.00011940367,0.00003210091,0.056571357],"genre_scores_gemma":[0.0006009099,0.0011279271,0.940444,0.00037226692,0.00076039287,0.00018504953,0.0018743933,0.00013299925,0.05450205],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973686,0.00079565606,0.00062653754,0.00088361,0.000086971435,0.00023863379],"domain_scores_gemma":[0.99865466,0.000051468596,0.0003571363,0.00071398827,0.00013169652,0.000091071386],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00046067563,0.00035695985,0.0006194549,0.00019224631,0.00004458894,0.00001078973,0.00021163782,0.0013800807,0.00020755625],"category_scores_gemma":[0.0004091221,0.00035991985,0.00017841211,0.000043727872,0.0003205521,0.000002041865,0.00023219785,0.00040130434,0.0000026065798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013231405,0.000034875993,0.000029575369,0.0000735559,0.000045045483,0.000021636883,0.000021685912,0.0000028210695,0.9750173,0.019555472,0.00013022067,0.004935505],"study_design_scores_gemma":[0.0007961766,0.00048376768,0.000007448996,0.00009161345,0.000045804754,0.00004301472,0.0000100648995,0.0000032921241,0.9160587,0.008576227,0.07354031,0.00034353448],"about_ca_topic_score_codex":0.000010722822,"about_ca_topic_score_gemma":0.0000121887015,"teacher_disagreement_score":0.07341009,"about_ca_system_score_codex":0.000014812351,"about_ca_system_score_gemma":0.00009834224,"threshold_uncertainty_score":0.9999163},"labels":[],"label_agreement":null},{"id":"W3153944926","doi":"10.1007/978-1-0716-1138-8_15","title":"Randomized Controlled Trials 5: Biomarkers and Surrogates/Outcomes","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Memorial University of Newfoundland; Seven Oaks General Hospital","funders":"","keywords":"Biomarker; Medicine; Clinical trial; Randomized controlled trial; Intensive care medicine; Surrogate endpoint; Disease; Internal medicine; Biology","score_opus":0.37266343669802016,"score_gpt":0.5312733544468452,"score_spread":0.15860991774882505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3153944926","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003299,0.1355971,0.5530846,0.023437465,0.0032656472,0.007945663,0.00057249755,0.00008778556,0.27567932],"genre_scores_gemma":[0.0001991333,0.007718894,0.8730151,0.015312369,0.00034207618,0.0012994783,0.00039879477,0.00023828736,0.10147587],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.96716475,0.016830057,0.013992104,0.0013818053,0.00008007222,0.00055123],"domain_scores_gemma":[0.95139796,0.040254273,0.007294065,0.0007816072,0.00009802253,0.00017404841],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.21941555,0.00065687025,0.019329514,0.0011616984,0.00007702748,0.00007801077,0.00031812364,0.0012357779,0.0015358892],"category_scores_gemma":[0.11027109,0.000629647,0.0018015719,0.00007557305,0.00045596575,0.000057825113,0.00017430575,0.0004952182,0.00013495727],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.003476199,0.000023158926,0.000485089,0.0001747792,0.0030295001,0.000013490549,0.00012064462,0.000004060203,0.0000783125,0.9914996,0.0003218954,0.0007732841],"study_design_scores_gemma":[0.23708586,0.000063067826,0.000047180747,0.00023728049,0.00029878816,0.000014693042,0.00007734045,0.00057169644,0.0000422282,0.70727104,0.053311296,0.0009795194],"about_ca_topic_score_codex":0.000237471,"about_ca_topic_score_gemma":0.0000521936,"teacher_disagreement_score":0.31993046,"about_ca_system_score_codex":0.00029528874,"about_ca_system_score_gemma":0.00022015408,"threshold_uncertainty_score":0.9996155},"labels":[],"label_agreement":null},{"id":"W3154004306","doi":"10.1007/978-1-0716-1138-8_30","title":"Changing Health-Related Behaviors 2: On Improving the Value of Health Spending","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Healthcare cost, quality, practices","field":"Health Professions","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Per capita; Health care; Value (mathematics); Health spending; Public economics; Population; Quality (philosophy); Business; Population health; Intervention (counseling); Demographic economics; Economic growth; Economics; Actuarial science; Labour economics; Environmental health; Medicine; Nursing; Health insurance","score_opus":0.496206569209287,"score_gpt":0.6071953127369651,"score_spread":0.11098874352767812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154004306","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011072898,0.08337863,0.67589307,0.07566286,0.020003846,0.016531069,0.0004829997,0.00055381464,0.11642084],"genre_scores_gemma":[0.009017712,0.0056127673,0.8375202,0.06919096,0.00096095895,0.00078386435,0.0010007878,0.0010643426,0.07484843],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9554322,0.03768897,0.003676744,0.0011985645,0.00038727684,0.0016162554],"domain_scores_gemma":[0.98766637,0.0061052823,0.004314713,0.001467947,0.00020340201,0.0002422666],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.043469086,0.0006211637,0.0021585452,0.0009651395,0.0008563111,0.000009953993,0.0006879681,0.0015956906,0.00047266463],"category_scores_gemma":[0.003908817,0.00052208244,0.00033983085,0.00036895665,0.00031017148,0.000044303517,0.0005980263,0.005476984,0.000042755266],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005723965,0.00007829947,0.00085419894,0.0020078411,0.00016464265,0.00008922711,0.0062321075,0.000015337842,0.006339588,0.6998043,0.000052766638,0.28430444],"study_design_scores_gemma":[0.011559557,0.011665714,0.008088291,0.06272714,0.0011326817,0.0004012889,0.05009605,0.001090518,0.014798169,0.4305916,0.39802888,0.009820082],"about_ca_topic_score_codex":0.0033376927,"about_ca_topic_score_gemma":0.00025369134,"teacher_disagreement_score":0.39797613,"about_ca_system_score_codex":0.0012780617,"about_ca_system_score_gemma":0.0025748496,"threshold_uncertainty_score":0.9997231},"labels":[],"label_agreement":null},{"id":"W3154094468","doi":"10.1007/978-1-0716-1138-8_6","title":"Longitudinal Studies 1: Determinants of Risk","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Observational study; Confounding; Selection bias; Casual; Randomized controlled trial; Computer science; Risk analysis (engineering); Randomized experiment; Causal inference; Clinical study design; Econometrics; Medicine; Statistics; Clinical trial; Mathematics; Surgery","score_opus":0.28411791574331063,"score_gpt":0.554268203409184,"score_spread":0.2701502876658734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154094468","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000384919,0.014920894,0.9617522,0.000007562873,0.00021826326,0.00029417395,0.000050059964,0.000074243326,0.022297714],"genre_scores_gemma":[0.00011966632,0.004646781,0.98954314,0.000023825642,0.000031768053,0.000036475267,0.000008916245,0.00007416694,0.005515274],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99744254,0.0007163501,0.00087449147,0.0005688397,0.00011258098,0.00028517947],"domain_scores_gemma":[0.9957923,0.0023600326,0.00077400997,0.0007773125,0.00025995658,0.000036386853],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015978316,0.00041995337,0.0015548868,0.00028832915,0.000024119021,0.0000035867295,0.0003198708,0.0006956964,0.00009633388],"category_scores_gemma":[0.0053549986,0.00038359506,0.00024732546,0.000065704175,0.0004685125,0.000021701217,0.00045286427,0.0006542176,0.0000024221195],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019408883,0.000036567388,0.0010748042,0.00037095798,0.00024123491,0.00032469028,0.00012957356,0.0000010635569,0.013133853,0.8884832,0.000024304889,0.09616032],"study_design_scores_gemma":[0.00011176609,0.00012286028,0.00001496617,0.00042032695,0.00013416885,0.000024958714,0.000023816321,0.000004753096,0.081869125,0.9148817,0.0020832191,0.00030832028],"about_ca_topic_score_codex":0.0000069142257,"about_ca_topic_score_gemma":0.00007968955,"teacher_disagreement_score":0.095852,"about_ca_system_score_codex":0.000094483876,"about_ca_system_score_gemma":0.00005999788,"threshold_uncertainty_score":0.9998616},"labels":[],"label_agreement":null},{"id":"W3154608224","doi":"10.1007/978-1-0716-1138-8_14","title":"Randomized Controlled Trials 4: Planning, Analysis, and Interpretation of Quality-of-Life Studies","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Quality of life (healthcare); Randomized controlled trial; Missing data; Medicine; Clinical trial; Psychology; Physical therapy; Statistics; Psychotherapist; Mathematics; Pathology","score_opus":0.5143632441247777,"score_gpt":0.5951961121748547,"score_spread":0.08083286805007694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154608224","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012751246,0.18528405,0.79769224,0.0014243015,0.0004992455,0.0017507052,0.00020308697,0.000010061611,0.011861198],"genre_scores_gemma":[0.011175973,0.014274388,0.95410234,0.005870563,0.00023362499,0.000741841,0.00045574724,0.000118737255,0.013026764],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.95925343,0.020396896,0.019174114,0.00083944004,0.00008660879,0.00024950985],"domain_scores_gemma":[0.9391276,0.0436066,0.0164042,0.00054969464,0.00023490665,0.0000769446],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.20906705,0.0003731952,0.023055404,0.0018023655,0.000029890707,0.000014465667,0.00020706141,0.0006209281,0.0002094856],"category_scores_gemma":[0.17906158,0.0003642888,0.0017791055,0.0001477333,0.00046358202,0.000039715203,0.00011931883,0.0002865719,0.000004996701],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.008861757,0.000029337205,0.0012323639,0.0008622676,0.018981915,0.0000016114724,0.0015042383,0.00028715393,0.00016839431,0.96751624,0.00005024871,0.0005044716],"study_design_scores_gemma":[0.18508671,0.00016747625,0.00017365733,0.0007917976,0.0024811716,0.000001578322,0.0009158094,0.006155851,0.00018269969,0.8007558,0.0023631959,0.00092427817],"about_ca_topic_score_codex":0.00019783592,"about_ca_topic_score_gemma":0.00004076616,"teacher_disagreement_score":0.17622496,"about_ca_system_score_codex":0.00012580561,"about_ca_system_score_gemma":0.00017167814,"threshold_uncertainty_score":0.9998809},"labels":[],"label_agreement":null},{"id":"W3154753937","doi":"10.1007/978-1-0716-1138-8_27","title":"Evidence-Based Decision Making 7: Health Economics in Clinical Research","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Health care; Economic evaluation; Scarcity; Health economics; Medicine; Cost–benefit analysis; Clinical trial; Outcome (game theory); Resource (disambiguation); Business; Risk analysis (engineering); Economics; Computer science; Political science; Economic growth","score_opus":0.8354707036500245,"score_gpt":0.6808333339404768,"score_spread":0.15463736970954767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154753937","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014372707,0.095996395,0.83222985,0.02892902,0.0028283992,0.002191971,0.00020790895,0.00004199689,0.03613717],"genre_scores_gemma":[0.00055230904,0.011063634,0.9592408,0.023771968,0.00046139685,0.00015876105,0.000097040975,0.00015843581,0.0044956603],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.97287834,0.010681227,0.012734339,0.0024450466,0.00012064144,0.0011404003],"domain_scores_gemma":[0.97258,0.022092856,0.0033438613,0.0016027488,0.00014946444,0.00023108162],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.206165,0.00045221968,0.0034874894,0.0022793415,0.00012441464,0.000078678306,0.00086308335,0.0015890128,0.00077833654],"category_scores_gemma":[0.034813814,0.0006203533,0.0004714769,0.00024743975,0.00038266229,0.00012139764,0.00041673414,0.002140804,0.0004983748],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078837504,0.00009231035,0.009684181,0.00040479907,0.00007240256,0.00003890119,0.00014390136,0.00056283775,0.0000050365416,0.9223778,0.0012724688,0.0652665],"study_design_scores_gemma":[0.001080003,0.00039327162,0.0019244872,0.0038556731,0.00000536437,0.000008992794,0.00008098524,0.0052124714,0.000007978915,0.75902045,0.22760795,0.00080236007],"about_ca_topic_score_codex":0.00044725556,"about_ca_topic_score_gemma":0.0009493355,"teacher_disagreement_score":0.22633548,"about_ca_system_score_codex":0.0026794628,"about_ca_system_score_gemma":0.0020428356,"threshold_uncertainty_score":0.99970716},"labels":[],"label_agreement":null},{"id":"W3154889462","doi":"10.1007/978-1-0716-1197-5_22","title":"Probing Protein–Membrane Interactions and Dynamics Using Hydrogen–Deuterium Exchange Mass Spectrometry (HDX-MS)","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":47,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Hydrogen–deuterium exchange; Membrane; Chemistry; Mass spectrometry; Phosphatidylinositol; Deuterium; Biophysics; Membrane protein; Biochemistry; Kinase; Chromatography; Biology; Physics","score_opus":0.022801419358708903,"score_gpt":0.36682695191249043,"score_spread":0.34402553255378154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154889462","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20891654,0.00039187894,0.7794918,0.0002381587,0.000039238614,0.00018283162,0.000025731237,0.00009700711,0.010616843],"genre_scores_gemma":[0.08504459,0.00006746698,0.9139667,0.00006973455,0.00005816092,0.00018450823,0.00007424404,0.00004055971,0.0004940128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834865,0.00027355037,0.00034713693,0.0005836048,0.00006769079,0.00037935792],"domain_scores_gemma":[0.99912953,0.00008761894,0.00013742707,0.00051539583,0.000052688774,0.00007735745],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004118604,0.00022148037,0.00034879037,0.00022563498,0.00008603731,0.000037295482,0.00019193321,0.00023883545,0.0012158104],"category_scores_gemma":[0.00014761648,0.00024300459,0.00009712915,0.00062470656,0.000121767865,0.000046047924,0.00023688184,0.00046358028,0.0000012904819],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005101988,0.000059336486,0.00070722075,0.000112386086,0.00003936742,0.000047510286,0.000025929096,0.000006935846,0.98294747,0.01352593,0.0000010849876,0.0025217556],"study_design_scores_gemma":[0.00018507488,0.000019365463,0.000018948365,0.000053640884,0.00002682799,0.00014007225,0.0000660444,0.00866991,0.9707957,0.017798388,0.0019760628,0.00024996386],"about_ca_topic_score_codex":0.000084401676,"about_ca_topic_score_gemma":0.000035675617,"teacher_disagreement_score":0.13447495,"about_ca_system_score_codex":0.0002184008,"about_ca_system_score_gemma":0.000042832016,"threshold_uncertainty_score":0.9996972},"labels":[],"label_agreement":null},{"id":"W3154926552","doi":"10.1007/978-1-0716-1197-5_12","title":"A Quick Primer in Fluorescence-Based Equilibrium and Pre-steady State Methods for Determining Protein–Nucleotide Affinities","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Click Chemistry and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"Canadian Institutes of Health Research","keywords":"Affinities; Binding affinities; Chemistry; Ribonucleoprotein; Nucleotide; Fluorescence; Dissociation (chemistry); Computational biology; Biophysics; Biochemistry; Biology; RNA","score_opus":0.04005202155776855,"score_gpt":0.4105513538684617,"score_spread":0.37049933231069315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154926552","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44958997,0.0004936397,0.54873294,0.00021192494,0.000025092571,0.00025727213,0.000029115987,0.000037931517,0.0006220891],"genre_scores_gemma":[0.033744022,0.000011135731,0.9648838,0.00014244931,0.000026825015,0.0007913578,0.000068549074,0.000035311474,0.00029656125],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777734,0.000604879,0.00049464364,0.0006400025,0.000047882088,0.00043525168],"domain_scores_gemma":[0.99814993,0.001091335,0.00014079789,0.0004754947,0.00006641191,0.00007603692],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010933331,0.00023132053,0.00042353064,0.00007203836,0.000040498267,0.000029781218,0.00022111999,0.00023987066,0.0000657973],"category_scores_gemma":[0.0015602062,0.00025014335,0.00009149663,0.00022485833,0.00020650936,0.000030102945,0.00018004258,0.00030072866,5.233026e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057785703,0.00007406767,0.00092311995,0.00023521512,0.000017978193,0.000016944701,0.00019057901,0.00004676542,0.9471005,0.00038064923,0.0000017364034,0.050954618],"study_design_scores_gemma":[0.000844114,0.000030955413,0.00005978224,0.000101965954,0.000017228544,0.000010030778,0.00014410549,0.005066047,0.9814704,0.009465994,0.0025265012,0.00026285974],"about_ca_topic_score_codex":0.00002797649,"about_ca_topic_score_gemma":0.0000128481215,"teacher_disagreement_score":0.41615084,"about_ca_system_score_codex":0.000050799925,"about_ca_system_score_gemma":0.00016734938,"threshold_uncertainty_score":0.99999505},"labels":[],"label_agreement":null},{"id":"W3154963686","doi":"10.1007/978-1-0716-1138-8_31","title":"Changing Health-Related Behaviors 3: Lessons from Implementation Science","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Policy Implementation Science","field":"Health Professions","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Behavior change; Behaviour change; Computer science; Management science; Theory of change; Psychological intervention; Knowledge management; Data science; Psychology; Engineering; Social psychology; Sociology","score_opus":0.7060474534857776,"score_gpt":0.8050419207961862,"score_spread":0.09899446731040862,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154963686","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000054891127,0.81341827,0.17892411,0.002016978,0.0021190944,0.0027963573,0.00038975538,0.00007815594,0.00020235579],"genre_scores_gemma":[0.0000024540493,0.65672827,0.3372806,0.004046438,0.000086609616,0.0012332803,0.00049151713,0.000059963284,0.00007086373],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9659115,0.026430758,0.003497473,0.0014718265,0.000384694,0.0023037298],"domain_scores_gemma":[0.9923875,0.003929144,0.0020629591,0.0009691485,0.0002325673,0.0004186892],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.024702493,0.0004887876,0.0024959047,0.0020694172,0.001125195,0.000027223252,0.0010362469,0.00065430923,0.0012640504],"category_scores_gemma":[0.0033078631,0.0004601488,0.00026057308,0.005293564,0.00045501973,0.00010874689,0.0006870466,0.001720876,0.000114197544],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[5.921194e-7,0.000013065865,0.00008382336,0.0010285971,0.000019925625,0.000014896061,0.0034691312,2.155236e-7,0.00052419625,0.004635105,0.00008175787,0.9901287],"study_design_scores_gemma":[0.0005320945,0.000066876346,0.00004886681,0.0042008893,0.00010354167,0.000010160945,0.003698625,0.0000055227406,0.00012605626,0.001197684,0.9895247,0.0004849583],"about_ca_topic_score_codex":0.0024504117,"about_ca_topic_score_gemma":0.00036170907,"teacher_disagreement_score":0.98964375,"about_ca_system_score_codex":0.0019274862,"about_ca_system_score_gemma":0.01079475,"threshold_uncertainty_score":0.999785},"labels":[],"label_agreement":null},{"id":"W3154973182","doi":"10.1007/978-1-0716-1138-8_33","title":"Changing Health-Related Behaviours 5: On Interventions to Change Physician Behaviours","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Primary Care and Health Outcomes","field":"Health Professions","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Psychological intervention; Nudge theory; Context (archaeology); Health care; Behavior change; Behaviour change; Psychology; Medicine; Nursing; Medical education; Social psychology; Political science","score_opus":0.17747641124621572,"score_gpt":0.5437815758554196,"score_spread":0.3663051646092039,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154973182","genre_codex":"other","genre_gemma":"commentary","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016259708,0.041503564,0.22253601,0.12557958,0.024820589,0.017238975,0.002513055,0.0009739013,0.56320834],"genre_scores_gemma":[0.00012483622,0.0012245302,0.28689405,0.39424688,0.0012190639,0.0026513415,0.004701862,0.000739169,0.30819827],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99219525,0.0032636572,0.0017421226,0.0011011302,0.00021339324,0.0014844381],"domain_scores_gemma":[0.9969859,0.0005831885,0.0008412494,0.0010236109,0.00018436238,0.0003816652],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.0032762717,0.00064815395,0.0017765454,0.0015784685,0.00049130636,0.000008915549,0.00049730815,0.0014663922,0.0010179337],"category_scores_gemma":[0.000211167,0.00067924464,0.0007010504,0.0003374528,0.00010051366,0.00003393592,0.0005199072,0.0029158916,0.00019953458],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013350029,0.00036451436,0.0013274569,0.0017542,0.0003048479,0.0007661262,0.0064219614,0.000003828006,0.0011749514,0.46146047,0.011378455,0.5149097],"study_design_scores_gemma":[0.0061188955,0.006343101,0.007940905,0.02873835,0.0010904341,0.00005468611,0.0026954191,0.0000100018315,0.0012347745,0.086963825,0.85269606,0.006113518],"about_ca_topic_score_codex":0.00061688054,"about_ca_topic_score_gemma":0.0009817639,"teacher_disagreement_score":0.84131765,"about_ca_system_score_codex":0.0016301457,"about_ca_system_score_gemma":0.00085555407,"threshold_uncertainty_score":0.9998953},"labels":[],"label_agreement":null},{"id":"W3154984107","doi":"10.1007/978-1-0716-1138-8_26","title":"Evidence-Based Decision Making 6: Administrative Databases as Secondary Data Source for Epidemiologic and Health Service Research","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Health care; Service (business); Data source; Business; Health services; Population health; HRHIS; Health policy; Database; Data quality; Knowledge management; Population; Medicine; Nursing; Public health; Computer science; Environmental health; Political science; Marketing","score_opus":0.9197772837183307,"score_gpt":0.6926750453432859,"score_spread":0.22710223837504473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3154984107","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001030784,0.092781805,0.8625616,0.035681844,0.00041585419,0.0018218012,0.0022671276,0.000027308219,0.004339616],"genre_scores_gemma":[0.0001266987,0.0032042444,0.94619805,0.045802332,0.00024886304,0.0002204643,0.0017299266,0.000094282295,0.0023751461],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.98511225,0.0061937864,0.005153373,0.0025810886,0.000115700175,0.0008437726],"domain_scores_gemma":[0.95422876,0.040188607,0.0028196098,0.0022856533,0.00025368444,0.0002236927],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.15212204,0.00046006154,0.0026527715,0.00089008507,0.0002935046,0.00007158713,0.0010764727,0.00071671006,0.00057153485],"category_scores_gemma":[0.05935587,0.0005544325,0.00014853066,0.00018846476,0.0003223153,0.000211884,0.0009890675,0.0011350354,0.000097300595],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017205857,0.00006465047,0.0013105447,0.0024922264,0.00020369508,0.00002352049,0.00030428215,0.00009792728,0.00004853223,0.9188541,0.008503623,0.0679248],"study_design_scores_gemma":[0.00080689474,0.0005980828,0.00035582265,0.0038938564,0.000018369987,0.000030743588,0.00036380542,0.007405786,0.000024860577,0.4857055,0.500027,0.00076931075],"about_ca_topic_score_codex":0.00089006213,"about_ca_topic_score_gemma":0.00088914734,"teacher_disagreement_score":0.49152336,"about_ca_system_score_codex":0.0006621505,"about_ca_system_score_gemma":0.0020263367,"threshold_uncertainty_score":0.9996907},"labels":[],"label_agreement":null},{"id":"W3155493033","doi":"10.1007/978-1-0716-1138-8_2","title":"Bias in Clinical Research","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Information bias; Confounding; Selection bias; Epidemiology; Medicine; Etiology; Disease; Intervention (counseling); Clinical psychology; Psychology; Intensive care medicine; Psychiatry; Pathology","score_opus":0.8533028062984362,"score_gpt":0.6775566293721398,"score_spread":0.17574617692629646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155493033","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0012247175,0.042651277,0.2473333,0.021611257,0.00329444,0.0018803476,0.0002683087,0.000049042086,0.6816873],"genre_scores_gemma":[0.00015767249,0.003608122,0.84426093,0.012945963,0.00076139084,0.00022470094,0.00024313196,0.00019417162,0.13760392],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9780409,0.009982978,0.009273695,0.0017695024,0.00010394067,0.0008290134],"domain_scores_gemma":[0.98795134,0.008684543,0.0017898869,0.0012726797,0.0001295562,0.00017199708],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaresearch","insufficient_payload"],"category_scores_codex":[0.17288573,0.0003451025,0.0027699706,0.0016976001,0.000059996106,0.000040282117,0.00063828536,0.0017980465,0.00139516],"category_scores_gemma":[0.03264019,0.00046470496,0.0003761104,0.00022682056,0.00041708513,0.000050483915,0.0003834318,0.00217445,0.0012836409],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011016422,0.000054555472,0.0077885226,0.00013734904,0.00006909218,0.000060501,0.00013577862,0.000011883303,0.000020157377,0.9861488,0.0017189562,0.0038434416],"study_design_scores_gemma":[0.00051223807,0.00010410648,0.00078649574,0.00018830852,0.000003220429,0.0000065785407,0.00006381691,0.00022132287,0.000013490149,0.50744236,0.49027553,0.0003825421],"about_ca_topic_score_codex":0.0004852306,"about_ca_topic_score_gemma":0.00040403949,"teacher_disagreement_score":0.59692764,"about_ca_system_score_codex":0.0007671397,"about_ca_system_score_gemma":0.00048270507,"threshold_uncertainty_score":0.9997805},"labels":[],"label_agreement":null},{"id":"W3155501624","doi":"10.1007/978-1-0716-1138-8_34","title":"Changing Health-Related Behaviors 6: Analysis, Interpretation, and Application of Big Data","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Artificial Intelligence in Healthcare","field":"Health Professions","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; IBM (Canada)","funders":"","keywords":"Big data; Perspective (graphical); Data science; Interpretation (philosophy); Health care; Value (mathematics); Computer science; Data mining; Artificial intelligence; Political science","score_opus":0.3247739357124168,"score_gpt":0.6435753683036743,"score_spread":0.31880143259125754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155501624","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000070425776,0.5273982,0.4711384,0.00006474545,0.0003340291,0.0009287191,0.00009304183,0.00001542294,0.000020406902],"genre_scores_gemma":[0.00003564509,0.84152085,0.15492341,0.00015700642,0.00005133602,0.0004150115,0.0028322812,0.000042526255,0.00002195019],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9796282,0.016027601,0.0027273034,0.00097206136,0.000097298085,0.0005475533],"domain_scores_gemma":[0.9944242,0.0020416388,0.0017034627,0.001524517,0.00019731378,0.000108824126],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.007903329,0.00030557098,0.0028061876,0.0013977138,0.00018049542,0.000003894564,0.00062247145,0.0009877839,0.000036574827],"category_scores_gemma":[0.0017777482,0.00028332777,0.00021251003,0.0030272875,0.00016963316,0.000024654166,0.0006684032,0.0011884647,0.0000069211164],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000020849343,0.000020395923,0.00094030757,0.0048231445,0.00022404482,0.0000036070328,0.0009850038,0.0000038053408,0.00002906905,0.0014960909,0.0000038010057,0.99146867],"study_design_scores_gemma":[0.0002994825,0.00030329282,0.000081199025,0.030154696,0.006996276,0.000029099889,0.007528329,0.012592752,0.00011989496,0.0069616972,0.9332523,0.0016810313],"about_ca_topic_score_codex":0.0021456515,"about_ca_topic_score_gemma":0.0010803966,"teacher_disagreement_score":0.98978764,"about_ca_system_score_codex":0.0002083358,"about_ca_system_score_gemma":0.00080834655,"threshold_uncertainty_score":0.9999619},"labels":[],"label_agreement":null},{"id":"W3155589879","doi":"10.1007/978-1-0716-1138-8_17","title":"Randomized Controlled Trials 7: On Contamination and Estimating the Actual Treatment Effect","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Censoring (clinical trials); Randomized controlled trial; Discontinuation; Treatment effect; Treatment and control groups; Medicine; Sample size determination; Psychological intervention; Statistics; Mathematics; Surgery; Internal medicine","score_opus":0.1615683949677094,"score_gpt":0.523665076592925,"score_spread":0.3620966816252157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155589879","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018699377,0.0016937697,0.9648629,0.00014103395,0.00021954207,0.0047744703,0.000010060989,0.000082331986,0.028028939],"genre_scores_gemma":[0.0002666336,0.0003564674,0.98842925,0.00015758035,0.00008845772,0.00145908,0.000042161548,0.000068184774,0.0091322055],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.983207,0.01449483,0.0014330195,0.0005089475,0.00012646684,0.00022973932],"domain_scores_gemma":[0.91479623,0.08356268,0.0010850963,0.00044477722,0.00007874803,0.000032455155],"candidate_categories":["metaresearch","metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.021195378,0.00057510356,0.0062680165,0.0002271488,0.000057265326,0.000030829025,0.000146758,0.0006341871,0.00008251556],"category_scores_gemma":[0.056750916,0.00028319674,0.00077644363,0.000029838333,0.00031270794,0.000013701996,0.00008758226,0.00042741452,0.00000139143],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.012529816,0.00002303064,4.330512e-7,0.000038418697,0.00083568087,0.00004270529,0.000105895284,0.000005376485,0.009326383,0.8612928,0.0000041958465,0.11579529],"study_design_scores_gemma":[0.1076765,0.0006577808,1.0109644e-7,0.00031045263,0.0010233128,0.000015383788,0.00000704268,0.0008137665,0.024472779,0.8643372,0.00041853896,0.0002671263],"about_ca_topic_score_codex":0.0000068664435,"about_ca_topic_score_gemma":0.0000066932434,"teacher_disagreement_score":0.11552817,"about_ca_system_score_codex":0.000170307,"about_ca_system_score_gemma":0.000055431163,"threshold_uncertainty_score":0.99996203},"labels":[],"label_agreement":null},{"id":"W3155688859","doi":"10.1007/978-1-0716-1138-8_25","title":"Evidence-Based Decision Making 5: Knowledge Translation and the Knowledge to Action Cycle","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Health Sciences Research and Education","field":"Health Professions","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Knowledge translation; Bridging (networking); Knowledge management; Identification (biology); Context (archaeology); Knowledge value chain; Action (physics); Computer science; Organizational learning; Geography","score_opus":0.6533421070870573,"score_gpt":0.7139952196018887,"score_spread":0.06065311251483141,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3155688859","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000015393613,0.5884285,0.40809244,0.00037194425,0.001064309,0.0015879659,0.0000029459577,0.0000130623785,0.00042342502],"genre_scores_gemma":[0.000013301911,0.7213947,0.27685183,0.0003511277,0.00021174442,0.0010732397,0.000018086384,0.00002227636,0.00006364018],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9663132,0.031027256,0.0011240002,0.00070140575,0.00013614363,0.0006980315],"domain_scores_gemma":[0.9707266,0.028046392,0.00029543912,0.0005216953,0.0002473112,0.00016255383],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.019826254,0.00027072898,0.0012056803,0.0008245135,0.0005146103,0.000025739375,0.0004206709,0.0006942413,0.00013659344],"category_scores_gemma":[0.015116934,0.00017255987,0.00017680776,0.002367546,0.00020387076,0.00006083949,0.00019376751,0.0012905762,0.00008908439],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036360707,0.00002442622,0.000014104889,0.0036538956,0.000009299052,0.0000012730039,0.00096243684,0.0000031059656,0.000032621265,0.00087081065,0.00014481622,0.99424684],"study_design_scores_gemma":[0.00037870358,0.00007464655,0.000027398775,0.029307924,0.000065377375,0.0000032365972,0.00028269252,0.0009451763,0.000005449892,0.0019611192,0.9667499,0.00019836794],"about_ca_topic_score_codex":0.00008110219,"about_ca_topic_score_gemma":0.00028551216,"teacher_disagreement_score":0.9940485,"about_ca_system_score_codex":0.00041722992,"about_ca_system_score_gemma":0.0032864532,"threshold_uncertainty_score":0.99317914},"labels":[],"label_agreement":null},{"id":"W3157008389","doi":"10.1007/978-1-0716-1138-8_5","title":"Ethical, Legal, and Social Issues (ELSI) in Clinical Genetics Research","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Ethics in Clinical Research","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Context (archaeology); Engineering ethics; Expansive; Bioethics; Ethical issues; Research program; Social research; Political science; Sociology; Social science; Engineering; Epistemology; Biology; Law","score_opus":0.6844557380224269,"score_gpt":0.7393769042135564,"score_spread":0.05492116619112952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3157008389","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00864872,0.12636071,0.09185232,0.1835858,0.0025290668,0.0048808693,0.00008929283,0.00015236383,0.58190084],"genre_scores_gemma":[0.00027330895,0.041020107,0.82252705,0.0060486454,0.0008248066,0.000058820082,0.00007792301,0.00017091143,0.12899846],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9833375,0.01068763,0.0021235002,0.0018289624,0.0010610948,0.00096130115],"domain_scores_gemma":[0.9691164,0.028429952,0.00018105883,0.0010402648,0.0009820134,0.0002503469],"candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.065700956,0.00039495144,0.0018828501,0.0007475111,0.00009550643,0.000048114427,0.00054519565,0.011064223,0.00037292056],"category_scores_gemma":[0.053747963,0.00038258758,0.0003601164,0.00024135938,0.004504433,0.000010170616,0.0016972553,0.031329602,0.000029557557],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027215297,0.00016053223,0.0014797776,0.0005368419,0.0001527842,0.0027451867,0.00013979196,3.5534916e-7,0.015176771,0.9121319,0.0003406631,0.06686322],"study_design_scores_gemma":[0.0013737787,0.0011003073,0.000626737,0.0007428126,0.000056673216,0.000048151007,0.00005826665,0.000041870946,0.0017520622,0.677635,0.3161847,0.00037962603],"about_ca_topic_score_codex":0.00012110424,"about_ca_topic_score_gemma":0.00038926615,"teacher_disagreement_score":0.7306747,"about_ca_system_score_codex":0.0001830633,"about_ca_system_score_gemma":0.001631942,"threshold_uncertainty_score":0.9998626},"labels":[],"label_agreement":null},{"id":"W3158886261","doi":"10.1007/978-1-0716-1311-5_19","title":"Transduction of Human T Cell Subsets with Lentivirus","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"","keywords":"Transduction (biophysics); Lentivirus; CD8; Chimeric antigen receptor; Cytotoxic T cell; Biology; T cell; Transgene; Gene; Molecular biology; Cell biology; Antigen; Virology; Immunology; Genetics; Human immunodeficiency virus (HIV); Immune system; In vitro; Biochemistry","score_opus":0.05896044766884998,"score_gpt":0.42310302526023563,"score_spread":0.36414257759138563,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3158886261","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013046907,0.008952988,0.2952101,0.00022160073,0.00033006855,0.0013993139,0.000034634915,0.000046529953,0.6807579],"genre_scores_gemma":[0.0021895724,0.001225923,0.4795283,0.00021389194,0.00017865389,0.000055308064,0.0004516285,0.00023550789,0.51592124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979161,0.00058156846,0.000432105,0.0005782486,0.00020342933,0.00028851823],"domain_scores_gemma":[0.99886006,0.00011476752,0.00015510048,0.00064041326,0.0001579112,0.0000717469],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009691749,0.00029901968,0.0009466874,0.0004418363,0.000020832875,0.0000044258472,0.00014669608,0.0006483048,0.0045924746],"category_scores_gemma":[0.000031536994,0.0002638884,0.00025503302,0.0001056852,0.0003733471,0.000008692724,0.000053135525,0.00083180214,0.000005728583],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023719908,0.00007323542,0.00009527559,0.0002187518,0.00019291606,0.0003520003,0.00008664892,0.0000013050839,0.96038043,0.0072406475,0.000011636064,0.031109966],"study_design_scores_gemma":[0.0015270552,0.0010909713,0.000038257174,0.00021660404,0.00017392727,0.00010143311,0.000016928389,0.0000034077398,0.94807225,0.007335122,0.04116508,0.00025894496],"about_ca_topic_score_codex":0.000054693402,"about_ca_topic_score_gemma":0.00003665988,"teacher_disagreement_score":0.18431823,"about_ca_system_score_codex":0.00009551747,"about_ca_system_score_gemma":0.00016337591,"threshold_uncertainty_score":0.99998134},"labels":[],"label_agreement":null},{"id":"W3159249508","doi":"10.1007/978-1-0716-1024-4_25","title":"Detailed Method for Performing the ExSTA Approach in Quantitative Bottom-Up Plasma Proteomics","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital","funders":"Warren Y. Soper Charitable Trust; Jewish General Hospital; Terry Fox Research Institute; Fondation De Famille Alvin Segal; Genome Canada; McGill University","keywords":"Chromatography; Sample preparation; Quantitative proteomics; Chemistry; Standard curve; Calibration curve; Tandem mass spectrometry; Isotope dilution; Bioanalysis; Mass spectrometry; Extraction (chemistry); Sample (material); Protocol (science); Proteomics; Detection limit; Biochemistry","score_opus":0.04208739124625076,"score_gpt":0.43063788429006095,"score_spread":0.3885504930438102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159249508","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.028342627,0.00026071913,0.96912634,0.0003055802,0.000029740497,0.00065959076,0.000022743425,0.00003872419,0.0012139092],"genre_scores_gemma":[0.001771323,0.000048461898,0.9948208,0.0001468734,0.000019403718,0.00292568,0.00006305262,0.000035351957,0.0001691086],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980782,0.000556172,0.00041736496,0.0005418389,0.000048674214,0.00035771728],"domain_scores_gemma":[0.9984128,0.0008103672,0.00014762279,0.0005136719,0.00008308738,0.000032439315],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001748447,0.00019150038,0.00035186918,0.000069818794,0.000091142785,0.000016965114,0.00035056315,0.0002903849,0.00002044693],"category_scores_gemma":[0.0008506097,0.0001584429,0.00011928508,0.00032559788,0.000102705475,0.000027033586,0.00017210082,0.00054723903,6.4860257e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046310135,0.00004839467,0.00038462618,0.00004996315,0.000019032643,0.0000030280466,0.00021079292,0.00024080616,0.9017656,0.08487232,0.0000025708973,0.012356587],"study_design_scores_gemma":[0.00048015383,0.000022766739,0.000006933189,0.0000162427,0.0000131156685,0.000018672037,0.00047902056,0.048455946,0.85213685,0.09667005,0.0015233791,0.00017686836],"about_ca_topic_score_codex":0.000015554238,"about_ca_topic_score_gemma":0.000018673345,"teacher_disagreement_score":0.049628712,"about_ca_system_score_codex":0.000089061105,"about_ca_system_score_gemma":0.00009291569,"threshold_uncertainty_score":0.64611137},"labels":[],"label_agreement":null},{"id":"W3159626357","doi":"10.1007/978-1-0716-1024-4_31","title":"Automated Workflow for Peptide-Level Quantitation from DIA/SWATH-MS Data","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"","keywords":"Workflow; Computer science; Software; Data mining; Database; Operating system","score_opus":0.107884331731283,"score_gpt":0.4418758024784452,"score_spread":0.3339914707471622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3159626357","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004032338,0.0015464679,0.97319514,0.00016877617,0.000094290976,0.00041369337,0.0026547054,0.00029273535,0.021593885],"genre_scores_gemma":[0.00001853999,0.0004141886,0.9657348,0.00018254467,0.00011821631,0.00035032092,0.018424662,0.00011448674,0.0146422405],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99786264,0.00009170875,0.00059237046,0.0010927249,0.00007385133,0.00028669983],"domain_scores_gemma":[0.9971941,0.0005829394,0.000300925,0.001753612,0.000112982816,0.00005544072],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000495081,0.00037318308,0.00061559584,0.00009535476,0.0000611718,0.000025696745,0.0008231354,0.0010793807,0.00029003804],"category_scores_gemma":[0.0004684853,0.00040986144,0.0001564646,0.000054387667,0.00012468333,0.00003124702,0.0005088373,0.000533161,0.00000796601],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022097693,0.000025234354,0.000010335811,0.00006303703,0.000115409246,0.000014992232,0.000014055531,0.000019637357,0.7981342,0.15831192,0.00036879294,0.042900305],"study_design_scores_gemma":[0.00035179636,0.000022548546,0.0000023487173,0.00021712456,0.000105491716,0.0000048505353,0.000007618817,0.005746111,0.25533065,0.49560297,0.24202317,0.0005853434],"about_ca_topic_score_codex":0.00007469333,"about_ca_topic_score_gemma":0.00005916982,"teacher_disagreement_score":0.5428035,"about_ca_system_score_codex":0.00008984036,"about_ca_system_score_gemma":0.00009846689,"threshold_uncertainty_score":0.9998353},"labels":[],"label_agreement":null},{"id":"W3160810242","doi":"10.1007/978-1-0716-1476-1_1","title":"An “-omycs” Toolbox to Work with MYC","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Toolbox; Transcription factor; Computational biology; Biology; Cancer research; Gene; Computer science; Genetics","score_opus":0.017774609385389165,"score_gpt":0.35127388914769353,"score_spread":0.33349927976230437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3160810242","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010055562,0.00275143,0.8950728,0.0003494685,0.0004209193,0.00068025955,0.000036758218,0.00003491736,0.09964789],"genre_scores_gemma":[0.0007288322,0.00014462779,0.9234543,0.0029975597,0.0003727655,0.000121191086,0.0010959854,0.00016352403,0.07092126],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973308,0.0005261548,0.0004432397,0.0011505539,0.00013028338,0.00041900008],"domain_scores_gemma":[0.9982925,0.000029568837,0.00016319711,0.0011748824,0.0001354235,0.00020444934],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00066077174,0.00050283683,0.0005643858,0.00022486257,0.00004735697,0.00003543926,0.00047232184,0.0010183505,0.00020859136],"category_scores_gemma":[0.00018929219,0.0004659739,0.00016941462,0.00013494381,0.00016056123,0.0000028681645,0.00019812192,0.0004252998,0.00002128249],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001929549,0.000052506573,0.00014152842,0.000021364778,0.00014789402,0.00011348483,0.000024280958,0.00005592009,0.91872936,0.03012612,0.00063459034,0.04975999],"study_design_scores_gemma":[0.0003915366,0.0008801941,0.00002644593,0.000100963334,0.000032869088,0.000033301654,0.000013226266,0.0000021968158,0.43166906,0.0019760218,0.5641721,0.000702087],"about_ca_topic_score_codex":0.0000098993105,"about_ca_topic_score_gemma":0.000036723115,"teacher_disagreement_score":0.56353754,"about_ca_system_score_codex":0.0000444442,"about_ca_system_score_gemma":0.0001943104,"threshold_uncertainty_score":0.9997792},"labels":[],"label_agreement":null},{"id":"W3162483528","doi":"10.1007/978-1-0716-1190-6_9","title":"NMR Detection Methods for Profiling RAS Nucleotide Cycling","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"GTPase; Guanine nucleotide exchange factor; Nucleotide; Effector; GTP'; Chemistry; Multiplex; CDC42; Ras superfamily; Biochemistry; Nuclear magnetic resonance spectroscopy; Enzyme; Guanine; GTPase-activating protein; Biophysics; Biology; Stereochemistry; Signal transduction; G protein; Bioinformatics","score_opus":0.03018854284058528,"score_gpt":0.39107829029792596,"score_spread":0.3608897474573407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3162483528","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023329201,0.0108498195,0.978452,0.00005690257,0.0005155399,0.0009862233,0.000028184993,0.00003737639,0.008840643],"genre_scores_gemma":[0.00018579357,0.0003397354,0.98621124,0.00041916227,0.00039716897,0.0002076491,0.00065895024,0.0001661169,0.011414154],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963405,0.0010530388,0.0007934619,0.0012223274,0.00008911019,0.0005015739],"domain_scores_gemma":[0.99831927,0.00019668817,0.0004075549,0.0007264616,0.00023756496,0.00011245717],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002836095,0.0005520992,0.0007675971,0.00029453597,0.000115211915,0.000033369095,0.00029697118,0.0014631052,0.000058099868],"category_scores_gemma":[0.00122597,0.0006056626,0.00056269177,0.00008774307,0.00016332816,0.00000317216,0.0002759785,0.0004918531,0.0000033043957],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007612287,0.000014265044,0.000004634391,0.000084207604,0.00013138732,0.000011570501,0.0000064661403,0.00017016313,0.8321022,0.016622167,0.0000050812705,0.15077174],"study_design_scores_gemma":[0.00055090553,0.00018345636,0.0000014346832,0.0000954496,0.00008337762,0.000028070735,0.000009478891,0.000910748,0.8326443,0.028597593,0.13634327,0.00055191916],"about_ca_topic_score_codex":0.000006675536,"about_ca_topic_score_gemma":0.000012314159,"teacher_disagreement_score":0.15021981,"about_ca_system_score_codex":0.00007705238,"about_ca_system_score_gemma":0.00017593849,"threshold_uncertainty_score":0.9998332},"labels":[],"label_agreement":null},{"id":"W3163029616","doi":"10.1007/978-1-0716-1476-1_2","title":"Methods of Expression, Purification, and Preparation of the c-Myc b-HLH-LZ for Its Biophysical Characterization","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Population; Chemistry; Computational biology; Docking (animal); Transcription factor; Gene; Context (archaeology); DNA; Cell biology; Biology; Biophysics; Stereochemistry; Biochemistry; Medicine","score_opus":0.055915415986935134,"score_gpt":0.46746256363726724,"score_spread":0.4115471476503321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163029616","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010570246,0.0030894955,0.9770637,0.0011718267,0.00027618706,0.0016988761,0.00018559925,0.000009922144,0.0059341583],"genre_scores_gemma":[0.0010621683,0.0008097404,0.953824,0.00019042133,0.00012780703,0.000109192835,0.00064713333,0.000043854012,0.043185722],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99805146,0.0007243004,0.0005611402,0.00038447022,0.00013267215,0.00014595341],"domain_scores_gemma":[0.99834895,0.00047701606,0.00035617143,0.00037310534,0.0003985016,0.000046238456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009956602,0.00018779853,0.0006462591,0.00014867504,0.000034150067,0.000004094776,0.00014198782,0.00040424208,0.00006061703],"category_scores_gemma":[0.0007197611,0.0001306958,0.00019659621,0.00008935959,0.00025555343,0.000016023374,0.00014848306,0.00024352601,4.5871772e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020594591,0.00003874684,0.00008334381,0.0003698143,0.00006993933,0.0000012991705,0.000072159986,7.3504646e-7,0.91008484,0.07064283,0.0000110225465,0.018419325],"study_design_scores_gemma":[0.00032180105,0.00023448924,0.0007854667,0.00026032238,0.000084664214,0.000011784388,0.000005163962,0.00037616031,0.95219713,0.008654098,0.036955185,0.00011370573],"about_ca_topic_score_codex":0.000004115866,"about_ca_topic_score_gemma":7.433655e-7,"teacher_disagreement_score":0.06198873,"about_ca_system_score_codex":0.000019394713,"about_ca_system_score_gemma":0.00013920691,"threshold_uncertainty_score":0.532962},"labels":[],"label_agreement":null},{"id":"W3163540948","doi":"10.1007/7651_2021_382","title":"An Optical-Flow-Based Method to Quantify Dynamic Behavior of Human Pluripotent Stem Cell-Derived Cardiomyocytes in Disease Modeling Platforms","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital","funders":"Canadian Institutes of Health Research","keywords":"Induced pluripotent stem cell; Contraction (grammar); Human Induced Pluripotent Stem Cells; Biomedical engineering; Context (archaeology); Computational biology; Computer science; Biology; Medicine; Embryonic stem cell; Internal medicine; Genetics; Gene","score_opus":0.03806173413131897,"score_gpt":0.42265815386886507,"score_spread":0.3845964197375461,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163540948","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43809912,0.00033455616,0.56117415,0.000031000673,0.00007408663,0.00021271795,0.000010653837,0.000043556767,0.000020151529],"genre_scores_gemma":[0.42952704,0.000009362542,0.5702525,0.000033443503,0.0000065254467,0.00009963506,0.00003360999,0.000035883422,0.0000020152631],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9968674,0.000981528,0.00066063646,0.0005788287,0.00024476604,0.00066679827],"domain_scores_gemma":[0.9983966,0.0003776148,0.000035159297,0.0006943364,0.000104512015,0.0003917895],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0030010573,0.00025152857,0.000593497,0.00050270226,0.000032541022,0.00002035622,0.00044739735,0.0002774635,0.000022941713],"category_scores_gemma":[0.00047635537,0.00025264488,0.0001537571,0.0006822674,0.000093761155,0.000031692944,0.00021760324,0.00051455805,0.0000026691273],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019608358,0.00009176651,0.00061885547,0.000109200046,0.000014162583,0.00017828053,0.00007014287,0.29166475,0.67180663,0.00017728872,1.3017208e-7,0.03524919],"study_design_scores_gemma":[0.00037697426,0.000067319284,0.000792752,0.000049794537,0.000018747733,0.0000015275693,0.00006214366,0.56349015,0.43436778,0.0005772002,0.000009226887,0.00018637066],"about_ca_topic_score_codex":0.000049235274,"about_ca_topic_score_gemma":0.000017162318,"teacher_disagreement_score":0.27182543,"about_ca_system_score_codex":0.00018611981,"about_ca_system_score_gemma":0.00014242677,"threshold_uncertainty_score":0.99999255},"labels":[],"label_agreement":null},{"id":"W3163708742","doi":"10.1007/978-1-0716-1476-1_4","title":"Identifying and Validating MYC:Protein Interactors in Pursuit of Novel Anti-MYC Therapies","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Click Chemistry and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; Structural Genomics Consortium; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Computational biology; Proximity ligation assay; Prioritization; Regulator; Protein–protein interaction; In vitro; Biology; Gene; Cell biology; Genetics","score_opus":0.05675278620024204,"score_gpt":0.4316720119838482,"score_spread":0.37491922578360615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163708742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87360615,0.0006712246,0.124678545,0.00016895725,0.000019878602,0.00004221182,0.000011244094,0.000011021722,0.00079078623],"genre_scores_gemma":[0.6415843,0.00002921472,0.35820183,0.000036699243,0.0000134593065,0.000027254158,0.00002655218,0.000010947884,0.000069762136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99893385,0.00014601205,0.00035865855,0.0003333536,0.00005045277,0.00017766087],"domain_scores_gemma":[0.9992576,0.00027342213,0.00012265389,0.0002856456,0.000034551984,0.000026118583],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051966606,0.000120130295,0.00027269777,0.000051178125,0.000023450177,0.00001867028,0.00018751186,0.00016544787,0.00013722105],"category_scores_gemma":[0.00057975104,0.00012777538,0.000053109645,0.00022601354,0.00010021096,0.000022503262,0.00020301936,0.00025028476,3.293523e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003782504,0.000085210224,0.004953893,0.000097560005,0.000021503794,0.0000095523465,0.00033936682,0.0000060198727,0.98600197,0.0015621281,5.0969385e-7,0.006918491],"study_design_scores_gemma":[0.00035574735,0.0000040628274,0.0003047828,0.00011116902,0.0000066323814,0.00001454926,0.0007398939,0.000108550936,0.99372196,0.0041988664,0.00031683999,0.0001169377],"about_ca_topic_score_codex":0.000049578113,"about_ca_topic_score_gemma":0.000009800523,"teacher_disagreement_score":0.23352328,"about_ca_system_score_codex":0.000021098384,"about_ca_system_score_gemma":0.000024986284,"threshold_uncertainty_score":0.52105284},"labels":[],"label_agreement":null},{"id":"W3163975815","doi":"10.1007/978-1-0716-1382-5_21","title":"Mouse Models of Lung Fibrosis","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Interstitial Lung Diseases and Idiopathic Pulmonary Fibrosis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Population Health Research Institute; McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Medicine; Clinical trial; Drug development; Tolerability; Drug discovery; Intensive care medicine; Translational research; Disease; Preclinical testing; Medical physics; Bioinformatics; Drug; Pathology; Pharmacology; Alternative medicine; Biology","score_opus":0.026219259556880398,"score_gpt":0.361736910376875,"score_spread":0.33551765081999463,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3163975815","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0002519986,0.023692388,0.6650035,0.00021351801,0.00042175193,0.00063613517,0.00029730317,0.00004537417,0.30943808],"genre_scores_gemma":[0.0014661232,0.001870616,0.843944,0.00081451057,0.00019364894,0.00004568656,0.0006916144,0.00017447675,0.1507993],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9980597,0.0002786449,0.00064165506,0.00058743067,0.0001426856,0.0002899123],"domain_scores_gemma":[0.9987088,0.00011479447,0.00021890733,0.000661636,0.00017505945,0.00012082916],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004268986,0.00036092682,0.0011587306,0.00030785613,0.000018542389,0.000005205522,0.00017639197,0.00083196815,0.0004513525],"category_scores_gemma":[0.000113496775,0.00034798126,0.00061248516,0.00006317514,0.00022018641,0.000019522218,0.00020717698,0.0005137795,0.0000039624924],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012229262,0.00012816186,0.00004352873,0.0010838967,0.0004903684,0.0006285147,0.00005453258,0.000059479695,0.57309806,0.41402364,0.00025185428,0.008915036],"study_design_scores_gemma":[0.0060762963,0.012317484,0.000052266194,0.011658858,0.005141337,0.0007336175,0.000115288756,0.015465189,0.36775073,0.43984613,0.13668817,0.00415462],"about_ca_topic_score_codex":0.00004291968,"about_ca_topic_score_gemma":0.0000017038471,"teacher_disagreement_score":0.20534733,"about_ca_system_score_codex":0.000117191375,"about_ca_system_score_gemma":0.00020917653,"threshold_uncertainty_score":0.99989724},"labels":[],"label_agreement":null},{"id":"W3164139532","doi":"10.1007/978-1-0716-1499-0_2","title":"RNA Footprinting Using Small Chemical Reagents","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"","keywords":"Footprinting; RNA; Riboswitch; Ligand (biochemistry); Computational biology; Binding site; Nucleotide; Chemistry; Small molecule; Transcription (linguistics); Biology; DNA footprinting; Biophysics; Biochemistry; Transcription factor; Non-coding RNA; DNA-binding protein; Gene; Receptor","score_opus":0.053906053262276404,"score_gpt":0.3611311271859936,"score_spread":0.30722507392371723,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164139532","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008680102,0.006424424,0.9063721,0.000046930287,0.00062183785,0.00045223243,0.00001531045,0.000023978502,0.07736311],"genre_scores_gemma":[0.0005781101,0.0004184687,0.9752926,0.0004352965,0.00035026032,0.000034012537,0.00017677029,0.00017393028,0.02254053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968713,0.0006401171,0.00065368053,0.0011948465,0.00011134777,0.00052870234],"domain_scores_gemma":[0.99843603,0.00007068326,0.00032464604,0.0009419845,0.000109830704,0.00011682572],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012097644,0.000558901,0.0007478636,0.00016487228,0.000050698996,0.000025578503,0.0005215501,0.0017429189,0.00012526818],"category_scores_gemma":[0.0005468879,0.0006060687,0.00042585997,0.000055539498,0.00015601738,0.0000011403101,0.00071479636,0.0004824949,0.0000065985646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030329438,0.00001789889,0.000018092931,0.000038091523,0.00014932605,0.00009223569,0.0000064185856,0.000008435664,0.9392684,0.012846862,0.0000068585837,0.047517017],"study_design_scores_gemma":[0.00027330447,0.00008613743,0.0000013723134,0.00013562244,0.00006694713,0.00006991216,0.000005752553,0.000019815232,0.9337797,0.015888901,0.049077783,0.00059472205],"about_ca_topic_score_codex":0.000018531286,"about_ca_topic_score_gemma":0.000005291534,"teacher_disagreement_score":0.068920545,"about_ca_system_score_codex":0.000057285393,"about_ca_system_score_gemma":0.0001632069,"threshold_uncertainty_score":0.9996391},"labels":[],"label_agreement":null},{"id":"W3164180620","doi":"10.1007/978-1-0716-1382-5_14","title":"Quantitative Analysis of Myofibroblast Contraction by Traction Force Microscopy","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Myofibroblast; Contraction (grammar); Self-healing hydrogels; Wound healing; Fibrosis; Traction (geology); Biomedical engineering; Chemistry; Cell biology; Biophysics; Materials science; Pathology; Medicine; Biology; Surgery; Internal medicine","score_opus":0.01900475138408837,"score_gpt":0.38686234395014635,"score_spread":0.367857592566058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164180620","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022046773,0.005333389,0.972683,0.00004913651,0.00046334133,0.0002541861,0.00030550858,0.000008013021,0.018698707],"genre_scores_gemma":[0.009612909,0.0069251354,0.76325893,0.0007414966,0.00019291564,0.00012566608,0.019067023,0.00031333487,0.19976258],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777466,0.00041690993,0.00068663503,0.000771717,0.00009673304,0.0002533393],"domain_scores_gemma":[0.9984482,0.00011876122,0.0005732706,0.0005585708,0.00024013998,0.0000610841],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005622357,0.00036272756,0.0008152447,0.00046303697,0.000040970674,0.000015916768,0.00019252715,0.00095004647,0.00027230266],"category_scores_gemma":[0.00022428544,0.00040318767,0.0006421222,0.00019080236,0.00011915706,0.0000042895467,0.000106669155,0.00040396512,0.0000033109923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000118652766,0.000059549537,0.000009581695,0.000019188421,0.0017358435,0.000006297823,0.000012293682,0.000092478906,0.97205174,0.023887793,0.0001738958,0.0018326744],"study_design_scores_gemma":[0.00030406128,0.0005448754,0.00000732783,0.00004484942,0.000854562,0.00001154037,0.000042572992,0.00082642597,0.90368205,0.0021674796,0.09112794,0.00038631196],"about_ca_topic_score_codex":0.00006210588,"about_ca_topic_score_gemma":0.00011568868,"teacher_disagreement_score":0.20942411,"about_ca_system_score_codex":0.000060574865,"about_ca_system_score_gemma":0.0000907035,"threshold_uncertainty_score":0.999842},"labels":[],"label_agreement":null},{"id":"W3164191612","doi":"10.1007/978-1-0716-1382-5_4","title":"Fibroblast and Myofibroblast Subtypes: Single Cell Sequencing","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; Arthritis Research Centre of Canada; University of British Columbia","funders":"","keywords":"Biology; Myofibroblast; Stromal cell; Transcriptome; Stroma; Fibroblast; Single-cell analysis; Cell biology; Extracellular matrix; Computational biology; Population; Cell; Genetics; Cell culture; Gene; Gene expression; Pathology; Fibrosis; Cancer research; Immunology; Medicine","score_opus":0.026000208928244194,"score_gpt":0.2958976578407874,"score_spread":0.26989744891254325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164191612","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012463828,0.0172199,0.7533506,0.00011319264,0.00065703166,0.000639247,0.00012280754,0.00005538948,0.21537799],"genre_scores_gemma":[0.006371817,0.0014574192,0.8912836,0.0010951081,0.00047263573,0.00003292169,0.0010483566,0.00034826825,0.09788989],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99736995,0.0003783133,0.0005482703,0.001132234,0.000096400654,0.00047482672],"domain_scores_gemma":[0.9988276,0.00008071387,0.00020476748,0.0006499202,0.000104893195,0.00013210616],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00046400857,0.000574055,0.0006745482,0.00017811848,0.00006210579,0.00004035175,0.00029443944,0.0013469519,0.00008597837],"category_scores_gemma":[0.00011808223,0.0006170814,0.00024834025,0.00005905455,0.00032648575,0.0000028518518,0.0003071961,0.0005000361,0.0000066068656],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005190664,0.000029871011,0.000071992625,0.00012793785,0.000072138806,0.0000702377,0.000034165758,0.000033448072,0.99217147,0.0031815702,0.000053287295,0.004101984],"study_design_scores_gemma":[0.0006439622,0.00066191633,0.000007048627,0.00027280045,0.000055248307,0.000087355584,0.000029336388,0.000042654916,0.91614133,0.004459651,0.07677114,0.0008275288],"about_ca_topic_score_codex":0.000031196825,"about_ca_topic_score_gemma":0.00007547682,"teacher_disagreement_score":0.13793297,"about_ca_system_score_codex":0.00007399622,"about_ca_system_score_gemma":0.00019405012,"threshold_uncertainty_score":0.9999495},"labels":[],"label_agreement":null},{"id":"W3164215926","doi":"10.1007/978-1-0716-1488-4_13","title":"Scoring Sepsis Severity in Mice","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Sepsis Diagnosis and Treatment","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Sepsis; Septic shock; Medicine; Disease; Animal model; Intensive care medicine; Scoring system; Immunology; Internal medicine","score_opus":0.11024972226957327,"score_gpt":0.449688547321617,"score_spread":0.3394388250520437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164215926","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017678976,0.07324821,0.09754451,0.0037640377,0.0021823093,0.0026215462,0.00007485127,0.00014479655,0.80274075],"genre_scores_gemma":[0.0010139943,0.0028242054,0.96479917,0.002894351,0.00012043987,0.0001339971,0.00023036881,0.00011344973,0.027870001],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979219,0.00039827166,0.00049876753,0.00075116684,0.00010111735,0.00032881662],"domain_scores_gemma":[0.9988985,0.0003335958,0.00012360665,0.0004989306,0.000058404425,0.00008693551],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000703542,0.00036656208,0.001080838,0.00038235242,0.000016309288,0.00000764292,0.00011444228,0.00073900115,0.0004919032],"category_scores_gemma":[0.00031955962,0.00034734016,0.00028575025,0.00010071919,0.00009090754,0.000009479795,0.00016484947,0.0006298464,0.000021302505],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003103617,0.001352031,0.08267589,0.00085091486,0.0023763468,0.021369042,0.0004466556,0.000030794385,0.19615333,0.17406693,0.00042169506,0.51994604],"study_design_scores_gemma":[0.010783881,0.001764907,0.025973063,0.0064142486,0.0018958554,0.0008870439,0.00015011182,0.00017830217,0.34416944,0.13604368,0.46853375,0.003205714],"about_ca_topic_score_codex":0.00015540844,"about_ca_topic_score_gemma":0.00009673105,"teacher_disagreement_score":0.8672547,"about_ca_system_score_codex":0.0003074666,"about_ca_system_score_gemma":0.00013037113,"threshold_uncertainty_score":0.99989784},"labels":[],"label_agreement":null},{"id":"W3164334809","doi":"10.1007/978-1-0716-1538-6_21","title":"Live Imaging and Analysis of Cilia and Cell Cycle Dynamics with the Arl13bCerulean-Fucci2a Biosensor and Fucci Tools","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Medical Research Council; North West Cancer Research; National Centre for the Replacement, Refinement and Reduction of Animals in Research; UK Research and Innovation","keywords":"Cilium; Centriole; Cell cycle; Motile cilium; Biology; Cell biology; Basal body; Centrosome; Cell; Population; Cell synchronization; Mitosis; Flagellum; Genetics; Medicine","score_opus":0.006569927177592937,"score_gpt":0.3007463911980533,"score_spread":0.2941764640204604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164334809","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8581155,0.011642412,0.12936868,0.00034333474,0.000021298174,0.0001174361,0.00007751931,0.0000036582815,0.00031019232],"genre_scores_gemma":[0.8531147,0.00077058346,0.14540853,0.00049262185,0.000011364562,0.000012434786,0.00012572623,0.0000150083815,0.00004900448],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998551,0.0005417665,0.00019053902,0.00046219368,0.000048601036,0.00020589362],"domain_scores_gemma":[0.9993215,0.00010318174,0.000089935456,0.0003251284,0.00007815059,0.00008208566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003389916,0.0001663014,0.00030788992,0.00008967766,0.000049829534,0.000023488306,0.00009216565,0.000111424444,0.000006707709],"category_scores_gemma":[0.0001957317,0.00012323662,0.00006367498,0.00025111492,0.00037207472,0.000002519069,0.00021053899,0.00008525656,1.3091966e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053902626,0.000037931222,0.055357274,0.000031960182,0.00036681464,0.000022060045,0.0001005659,0.00005558143,0.9331352,0.00017904103,0.000008977731,0.0106506655],"study_design_scores_gemma":[0.0016480745,0.00042183948,0.14103477,0.00002603222,0.0019723515,0.00009983019,0.0024100246,0.007958798,0.8413088,0.0012373122,0.0012539689,0.00062825077],"about_ca_topic_score_codex":0.000037700524,"about_ca_topic_score_gemma":0.00008256538,"teacher_disagreement_score":0.09182648,"about_ca_system_score_codex":0.0000060803713,"about_ca_system_score_gemma":0.000053656975,"threshold_uncertainty_score":0.50254434},"labels":[],"label_agreement":null},{"id":"W3164486360","doi":"10.1007/978-1-0716-1382-5_5","title":"Myofibroblast Adhesome Analysis by Mass Spectrometry","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Hemoglobin structure and function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Extracellular matrix; Myofibroblast; Cytoskeleton; Focal adhesion; Chemistry; Matrix (chemical analysis); Mass spectrometry; Adhesion; Cell biology; Cell adhesion; Biophysics; Computational biology; Cell; Biology; Biochemistry; Pathology; Chromatography; Medicine","score_opus":0.009705835138593098,"score_gpt":0.3169406169386249,"score_spread":0.30723478180003183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164486360","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022928743,0.00886038,0.8905175,0.00007354713,0.00041303245,0.00019728889,0.00016286547,0.000020512463,0.09952564],"genre_scores_gemma":[0.0007034372,0.0013804883,0.82183707,0.0011274641,0.00044931084,0.00003668917,0.0058229933,0.00016714407,0.16847537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969063,0.0005030987,0.00061549,0.0013235246,0.00014699381,0.00050458853],"domain_scores_gemma":[0.99838454,0.00005716796,0.00027034248,0.0010447977,0.00011166896,0.0001314745],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0006236567,0.00059541524,0.0009953888,0.00053476996,0.00004633539,0.000028024206,0.00038742242,0.0017751443,0.0006802826],"category_scores_gemma":[0.00017744112,0.00061459513,0.0007207839,0.0003387365,0.00020195747,0.00000206154,0.00025056466,0.0005695235,0.000015992953],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040513947,0.000014734421,0.00022543193,0.000021853031,0.0014389253,0.000050212388,0.0000040613954,0.000021690363,0.98705566,0.0062597026,0.0008954117,0.0039718235],"study_design_scores_gemma":[0.0004664297,0.00041685373,0.00004420523,0.000025843963,0.0007506214,0.000038822986,0.000011039528,0.000021459793,0.5497697,0.012084983,0.4354267,0.0009433192],"about_ca_topic_score_codex":0.000014020308,"about_ca_topic_score_gemma":0.00001860405,"teacher_disagreement_score":0.43728593,"about_ca_system_score_codex":0.00007784219,"about_ca_system_score_gemma":0.00011185629,"threshold_uncertainty_score":0.9996305},"labels":[],"label_agreement":null},{"id":"W3164544939","doi":"10.1007/978-1-0716-1374-0_21","title":"Assaying the Molecular Determinants and Kinetics of RNA Pseudouridylation by H/ACA snoRNPs and Stand-Alone Pseudouridine Synthases","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Pseudouridine; RNA; Ribonucleoprotein; Guide RNA; Biochemistry; Chemistry; Small nucleolar RNA; Biology; Transfer RNA; Non-coding RNA; Gene; Genome","score_opus":0.016875439373291095,"score_gpt":0.3591808494175241,"score_spread":0.342305410044233,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164544939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6004346,0.01873026,0.38017684,0.00033373586,0.000057199493,0.00012485267,0.00003121783,0.0000037603706,0.00010752438],"genre_scores_gemma":[0.86290044,0.0035115622,0.13312908,0.00023478833,0.000030073888,0.000039156846,0.000054560653,0.000026764385,0.00007359986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813294,0.00074422586,0.00034991038,0.00045630342,0.000078218894,0.00023842206],"domain_scores_gemma":[0.99914974,0.00009540523,0.00015405915,0.00043260437,0.00011207801,0.00005611662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005906372,0.00018363335,0.0002788562,0.00005597114,0.000048553866,0.000021046892,0.00014718375,0.00021701201,0.000008192147],"category_scores_gemma":[0.00045934244,0.00015478164,0.000060267943,0.00017387803,0.00026951754,0.000003935956,0.00018263167,0.0001267294,1.8450089e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028605056,0.000046511886,0.0019615635,0.000025772611,0.00003925642,0.000012221528,0.000023879886,0.000038633512,0.9712354,0.00039154073,0.000053154006,0.026143475],"study_design_scores_gemma":[0.0004743163,0.000164475,0.0010378201,0.000023367505,0.000040859082,0.00006580185,0.000062346284,0.0002576326,0.9930093,0.0010092838,0.0036786143,0.00017617304],"about_ca_topic_score_codex":0.000023967032,"about_ca_topic_score_gemma":0.000013499299,"teacher_disagreement_score":0.26246583,"about_ca_system_score_codex":0.000012233085,"about_ca_system_score_gemma":0.000049426366,"threshold_uncertainty_score":0.6311812},"labels":[],"label_agreement":null},{"id":"W3164733528","doi":"10.1007/978-1-0716-1382-5_27","title":"A Rodent Model of Hypertrophic Scarring: Splinting of Rat Wounds","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wound Healing and Treatments","field":"Medicine","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Myofibroblast; Granulation tissue; Hypertrophic scars; Scars; Wound healing; Splint (medicine); Medicine; Hypertrophic scar; Wound closure; Human skin; Pathology; Anatomy; Surgery; Biology; Orthodontics; Fibrosis","score_opus":0.062125970485703355,"score_gpt":0.43531720138848834,"score_spread":0.373191230902785,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164733528","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63515484,0.0013115931,0.36259645,0.0001545396,0.000104221916,0.00007967671,0.0000015423493,0.000007638465,0.00058952067],"genre_scores_gemma":[0.4390121,0.000046397556,0.56071854,0.000086970904,0.000009603452,0.000006712169,0.000008372047,0.000009411826,0.00010185988],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875355,0.00036892845,0.00037177923,0.00024629492,0.000073658695,0.00018579069],"domain_scores_gemma":[0.9993194,0.000101168516,0.00009623834,0.00032111286,0.00011668688,0.000045416356],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059626985,0.00010302948,0.00048372278,0.00012483525,0.00001468923,0.0000016423216,0.000056476663,0.00014587697,0.000011932242],"category_scores_gemma":[0.0004360307,0.000089714,0.00012264498,0.00020553896,0.00008039108,0.0000061509095,0.00006779692,0.00014975641,7.0907214e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050751674,0.0001807778,0.026993636,0.00010376525,0.000068957284,0.00006654778,0.00010865528,0.0008965642,0.96330357,0.0022924002,8.346209e-7,0.0059335623],"study_design_scores_gemma":[0.0013977331,0.00021848604,0.0010997076,0.00014431219,0.00012390474,0.00006757758,0.00006429323,0.012305515,0.9755296,0.008896611,0.00006364424,0.00008862481],"about_ca_topic_score_codex":0.00005883047,"about_ca_topic_score_gemma":0.0000044609415,"teacher_disagreement_score":0.1981221,"about_ca_system_score_codex":0.00003918928,"about_ca_system_score_gemma":0.00014966658,"threshold_uncertainty_score":0.3658431},"labels":[],"label_agreement":null},{"id":"W3164735931","doi":"10.1007/978-1-0716-1270-5_18","title":"Assessment of Mitochondrial Reactive Oxygen Species and Redox Regulation in Stem Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Reactive oxygen species; Cell biology; Stem cell; Mitochondrion; Mitochondrial ROS; Redox; Cell; Cell fate determination; Biology; Chemistry; Biochemistry; Transcription factor","score_opus":0.021031361158358002,"score_gpt":0.35315537229666283,"score_spread":0.3321240111383048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164735931","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20937447,0.00066924933,0.78589725,0.00012322601,0.00085432833,0.000249427,0.00001726632,0.000005400815,0.0028093907],"genre_scores_gemma":[0.04210376,0.00024760165,0.9562543,0.00021665491,0.00014196907,0.000039995004,0.00013689761,0.000022070511,0.00083676015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99710697,0.0016889827,0.00040116912,0.0005308835,0.00006109283,0.00021090482],"domain_scores_gemma":[0.9992877,0.00008858039,0.00013389117,0.00035599872,0.000091720634,0.000042108943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005519532,0.00015323161,0.00034034063,0.00013594906,0.000020877218,0.0000069845914,0.00009902178,0.00036267482,0.000041940955],"category_scores_gemma":[0.00017341977,0.00015829226,0.00007523417,0.0002123424,0.00013478097,0.0000029887474,0.0001506182,0.000164845,5.7516417e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000079154655,0.000057067085,0.0035696968,0.000014438574,0.000023926279,0.000020685931,0.00004615603,0.00008034725,0.9902613,0.0035815646,0.000036265687,0.0022293937],"study_design_scores_gemma":[0.0008845465,0.00022373047,0.0060418234,0.0000132357945,0.000011368465,0.000026752126,0.00012428724,0.00009099249,0.9827277,0.0015015719,0.008202705,0.00015128474],"about_ca_topic_score_codex":0.000018455716,"about_ca_topic_score_gemma":0.00006546547,"teacher_disagreement_score":0.17035705,"about_ca_system_score_codex":0.000026168353,"about_ca_system_score_gemma":0.00011074125,"threshold_uncertainty_score":0.6454971},"labels":[],"label_agreement":null},{"id":"W3164768617","doi":"10.1007/978-1-0716-1382-5_13","title":"Soft Substrate Culture to Mechanically Control Cardiac Myofibroblast Activation","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital; University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"In vitro; In vivo; Cell culture; Cell biology; Fibroblast; Phenotype; Myofibroblast; Biology; Cell; Neuroscience; Medicine; Pathology; Biotechnology; Biochemistry; Genetics","score_opus":0.015316917752873915,"score_gpt":0.3677144722718053,"score_spread":0.3523975545189314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164768617","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.025583452,0.0023158665,0.9687458,0.0024425706,0.0004041516,0.0002529653,0.000005243213,0.00004606286,0.00020385513],"genre_scores_gemma":[0.10936683,0.000032401043,0.8876817,0.0009291501,0.00023172796,0.000054733315,0.00006069734,0.000028684037,0.0016140335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984329,0.0006326648,0.00024084952,0.00035354675,0.000083422645,0.00025666322],"domain_scores_gemma":[0.99932677,0.000108220935,0.000034143624,0.00026412157,0.0001324523,0.00013431798],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005651445,0.00016126432,0.0004844457,0.000101259284,0.00002319609,0.000005664816,0.000058406586,0.00021295217,0.000038856306],"category_scores_gemma":[0.0010538278,0.00012630533,0.00009639411,0.00036603428,0.000036916394,0.000010446771,0.000029168728,0.00028923675,0.00000819644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004666542,0.000034547913,0.00035786972,0.000024152276,0.000086910724,0.00008599906,0.00011824334,0.00037472148,0.9845297,0.00472004,0.0000827741,0.009538399],"study_design_scores_gemma":[0.0010693903,0.00038618318,0.0012268214,0.00009297593,0.000051428888,0.000037299425,0.00007617986,0.00031118726,0.9739074,0.0004622205,0.022231005,0.0001479013],"about_ca_topic_score_codex":0.000008247663,"about_ca_topic_score_gemma":0.0000016325312,"teacher_disagreement_score":0.08378338,"about_ca_system_score_codex":0.00005168334,"about_ca_system_score_gemma":0.00007278941,"threshold_uncertainty_score":0.51505816},"labels":[],"label_agreement":null},{"id":"W3164935617","doi":"10.1007/978-1-0716-1402-0_12","title":"High-Throughput Imaging of Arrays of Fluorescently Tagged Yeast Mutant Strains","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; University of Toronto","funders":"National Human Genome Research Institute; Canadian Institutes of Health Research","keywords":"Mutant; Yeast; Biology; High-throughput screening; Fluorescence microscope; Throughput; Confocal microscopy; Cell biology; Subcellular localization; Live cell imaging; Genetic screen; Computational biology; Microscopy; Confocal; Cell; Genetics; Fluorescence; Gene; Computer science; Cytoplasm; Pathology","score_opus":0.019428976029717028,"score_gpt":0.37457746234452755,"score_spread":0.3551484863148105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3164935617","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4173666,0.002134504,0.57928944,0.00018178989,0.0002138824,0.00018430088,0.00008866579,0.000004875846,0.0005359506],"genre_scores_gemma":[0.5173447,0.00021241652,0.48210135,0.00008871334,0.000046739304,0.000015452582,0.00011588812,0.000022855826,0.000051837585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975319,0.0009905292,0.00046742236,0.0004991387,0.0001318188,0.00037921168],"domain_scores_gemma":[0.99896115,0.000033121072,0.00013189756,0.00056510535,0.00023565438,0.00007309597],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007539891,0.00018067671,0.00038495805,0.00011076516,0.000022386976,0.0000060343928,0.00030904968,0.00019589659,0.000055348246],"category_scores_gemma":[0.00054460164,0.00017703616,0.00015882564,0.00030484248,0.00031547193,0.0000017216901,0.00034209166,0.00018437937,0.0000016150879],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051456867,0.00013544173,0.0028578711,0.00005422017,0.00006575615,0.000038711078,0.00004307803,0.00021587353,0.98390764,0.0016328001,0.000014623219,0.010982534],"study_design_scores_gemma":[0.0006579922,0.00017004393,0.0008846491,0.000026116972,0.000013816204,0.000025884125,0.000107619235,0.00017069532,0.99467385,0.002124579,0.0009821511,0.000162581],"about_ca_topic_score_codex":0.000058481583,"about_ca_topic_score_gemma":0.000024135217,"teacher_disagreement_score":0.09997813,"about_ca_system_score_codex":0.000014220346,"about_ca_system_score_gemma":0.0002072824,"threshold_uncertainty_score":0.72193253},"labels":[],"label_agreement":null},{"id":"W3165015553","doi":"10.1007/978-1-0716-1258-3_26","title":"Bioluminescence Resonance Energy Transfer (BRET) Imaging in Living Cells: Image Acquisition and Quantification","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Bioluminescence; Energy transfer; Förster resonance energy transfer; Chemistry; Biology; Physics; Ecology; Optics; Chemical physics; Fluorescence","score_opus":0.016990763376737064,"score_gpt":0.3380078412081356,"score_spread":0.32101707783139855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165015553","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0065968675,0.06718359,0.9108541,0.00050149194,0.00046073485,0.00065700035,0.00009432481,0.000041995114,0.013609868],"genre_scores_gemma":[0.20907149,0.11352933,0.586021,0.0033583052,0.0017081064,0.0007590778,0.004973995,0.0009427686,0.0796359],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965615,0.0005334913,0.0006707915,0.0014584837,0.00015666096,0.00061903795],"domain_scores_gemma":[0.9986875,0.00011434554,0.00011884058,0.00073648023,0.00023309154,0.000109714325],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001142103,0.0005206323,0.0005892097,0.00032784746,0.000059604547,0.000050567553,0.00041993975,0.00092815125,0.00005870746],"category_scores_gemma":[0.00022397978,0.00057339395,0.00015571366,0.00021004827,0.00058170204,0.000013857199,0.0003147337,0.00046713548,0.000003162053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040453444,0.000042954893,0.0008072622,0.00008692641,0.0000152029115,0.00008112762,0.000024834446,6.1372674e-7,0.9659794,0.005603064,0.00005556007,0.02726261],"study_design_scores_gemma":[0.00036682363,0.000096901975,0.0002361493,0.0005984631,0.000022597678,0.000059820148,0.000057273257,0.00018467147,0.97583467,0.0012841758,0.020508649,0.00074979843],"about_ca_topic_score_codex":0.00010807744,"about_ca_topic_score_gemma":0.00013260714,"teacher_disagreement_score":0.3248331,"about_ca_system_score_codex":0.000069197806,"about_ca_system_score_gemma":0.0001857835,"threshold_uncertainty_score":0.99967176},"labels":[],"label_agreement":null},{"id":"W3165015598","doi":"10.1007/978-1-0716-1382-5_28","title":"Three-Dimensional Model of Hypertrophic Scar Using a Tissue-Engineering Approach","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Wound Healing and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Hypertrophic scar; Scars; Hypertrophic scars; Extracellular matrix; Myofibroblast; Fibrosis; Pathology; Human skin; Wound healing; Tissue engineering; Skin equivalent; Keloid; Medicine; In vitro; Biology; Cell biology; Biomedical engineering; Keratinocyte; Immunology","score_opus":0.08428331298233367,"score_gpt":0.3869255994793643,"score_spread":0.3026422864970306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165015598","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005254146,0.0077357157,0.9795966,0.000037048292,0.00015128612,0.00032874904,0.000020968979,0.000025720861,0.006849751],"genre_scores_gemma":[0.00095644075,0.00004747272,0.9952884,0.00009005082,0.00005422797,0.0000119480455,0.00014080579,0.00008139532,0.0033292861],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99857336,0.00008327903,0.00044098674,0.00050831144,0.00013526762,0.0002587885],"domain_scores_gemma":[0.99915373,0.00008362192,0.00012820322,0.0004535944,0.000100501995,0.00008033375],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004156867,0.00032306666,0.0010031287,0.00030966068,0.000021702699,0.0000029036428,0.000081361344,0.0006706984,0.00002774178],"category_scores_gemma":[0.00009237261,0.00029481252,0.0001962959,0.000059800004,0.000092698516,0.000006321796,0.000105101186,0.00048613723,0.0000015966891],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117653224,0.00017837786,0.00011370332,0.00054351654,0.00078155607,0.00049304054,0.000033760232,0.052762117,0.8867131,0.05088057,0.0000037708683,0.0073788213],"study_design_scores_gemma":[0.0032108033,0.0006561315,0.00002752906,0.0017794335,0.0015198647,0.0010495189,0.0000050957187,0.8806861,0.06710514,0.041520737,0.0014313683,0.0010082927],"about_ca_topic_score_codex":0.000055208046,"about_ca_topic_score_gemma":0.000001783794,"teacher_disagreement_score":0.82792395,"about_ca_system_score_codex":0.00012254722,"about_ca_system_score_gemma":0.00022760486,"threshold_uncertainty_score":0.9999504},"labels":[],"label_agreement":null},{"id":"W3165131946","doi":"10.1007/978-1-0716-1382-5_20","title":"Animal and Human Models of Tissue Repair and Fibrosis: An Introduction","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research","keywords":"Myofibroblast; Fibrosis; Extracellular matrix; Biology; Bleomycin; Pathology; Cell biology; Immunology; Medicine; Genetics","score_opus":0.060468305211018675,"score_gpt":0.4679547874252042,"score_spread":0.4074864822141855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165131946","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000217133,0.8503706,0.14885011,0.0000809659,0.00013323886,0.00030180288,0.000004906189,0.000028016095,0.00001324183],"genre_scores_gemma":[0.000011783826,0.5736654,0.42577657,0.000006034999,0.0002304972,0.000027195141,0.00010558678,0.000027448334,0.00014946847],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976366,0.0011268477,0.00047191107,0.00054272515,0.00005535939,0.00016653765],"domain_scores_gemma":[0.9993215,0.00006873153,0.00011687061,0.00035817665,0.000049904487,0.00008481429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008884958,0.00026297246,0.0018103902,0.0002829515,0.000021092497,0.0000032174526,0.000047578866,0.000395219,0.000011879364],"category_scores_gemma":[0.00022011508,0.00020043147,0.00009676255,0.00022360454,0.00020822958,0.000015657139,0.000072328534,0.0003714581,9.185773e-8],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010021871,0.00007275038,0.000012958308,0.009553111,0.00024258386,0.00009368537,0.000121677214,0.000010879342,0.14545898,0.02245012,0.000034337423,0.8219389],"study_design_scores_gemma":[0.00056039245,0.002231648,0.000017614653,0.0042686975,0.0010963228,0.0008803435,0.000047453537,0.00022464457,0.0059187296,0.0002967066,0.984105,0.00035245693],"about_ca_topic_score_codex":0.000023025856,"about_ca_topic_score_gemma":0.0000014712731,"teacher_disagreement_score":0.98407066,"about_ca_system_score_codex":0.000027300195,"about_ca_system_score_gemma":0.00004799086,"threshold_uncertainty_score":0.8173358},"labels":[],"label_agreement":null},{"id":"W3165299103","doi":"10.1007/978-1-0716-1382-5_15","title":"Nucleocytoplasmic Shuttling of the Mechanosensitive Transcription Factors MRTF and YAP/TAZ","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Transcription factor; Mechanosensitive channels; Cell biology; Myocardin; Reprogramming; Biology; Effector; Hippo signaling pathway; Activator (genetics); Transcription (linguistics); Cell; Gene; Serum response factor; Genetics; Receptor","score_opus":0.018939932967757832,"score_gpt":0.33318257415018554,"score_spread":0.31424264118242773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165299103","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7683907,0.0011169564,0.22984928,0.00009213487,0.00023295225,0.00010611796,0.000020505879,0.0000069355638,0.00018437621],"genre_scores_gemma":[0.8943237,0.00012981716,0.105116285,0.0002540905,0.00003182414,0.0000077825825,0.00004451756,0.000023201716,0.000068798414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99755365,0.0013567387,0.0002980918,0.00046313618,0.000069969254,0.00025840598],"domain_scores_gemma":[0.9993217,0.00007308837,0.000100338766,0.0003641708,0.00009211873,0.000048589234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000633697,0.00018785094,0.0002915256,0.00006371872,0.000062042396,0.0000089445175,0.0001514435,0.00033306444,0.00000954051],"category_scores_gemma":[0.0004334686,0.00015150578,0.00015706265,0.00019944107,0.00018223668,0.000002176474,0.00012745027,0.00019504242,5.205851e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026271999,0.0000323083,0.0017759458,0.000017543573,0.000047040616,0.000009070144,0.00023444675,0.00005672912,0.99394363,0.001022341,9.819241e-7,0.0028337142],"study_design_scores_gemma":[0.0003841579,0.000119183656,0.00076781336,0.000027768336,0.000029199015,0.000031337957,0.0003066877,0.00013362429,0.9948867,0.0020602958,0.0010877954,0.00016541114],"about_ca_topic_score_codex":0.0000323381,"about_ca_topic_score_gemma":0.00003724382,"teacher_disagreement_score":0.12593295,"about_ca_system_score_codex":0.00001346557,"about_ca_system_score_gemma":0.00008570496,"threshold_uncertainty_score":0.61782265},"labels":[],"label_agreement":null},{"id":"W3165430899","doi":"10.1007/978-1-0716-1266-8_4","title":"Purification of Functional Platelet Mitochondria Using a Discontinuous Percoll Gradient","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Moncton","funders":"Canadian Institutes of Health Research","keywords":"Percoll; Mitochondrion; Cardiolipin; Platelet; Biology; Cell biology; Chemistry; Biochemistry; Immunology; Centrifugation","score_opus":0.03239450016222003,"score_gpt":0.3520410903855891,"score_spread":0.3196465902233691,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165430899","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26884893,0.0009474374,0.72855633,0.00007984464,0.0009501451,0.00015203559,0.000020029776,0.000006348024,0.000438891],"genre_scores_gemma":[0.029512336,0.00009752447,0.9686745,0.00037907736,0.00021390482,0.000049173585,0.00037540984,0.00003119471,0.0006668882],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99743754,0.0012141587,0.0004380754,0.00056907476,0.00007091883,0.00027022295],"domain_scores_gemma":[0.99912065,0.00004786014,0.00014774279,0.00046518174,0.0001581185,0.000060462422],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048992713,0.00017704272,0.00031565,0.0001260426,0.000041524014,0.000008013098,0.00013551014,0.0003549701,0.00013602052],"category_scores_gemma":[0.00059397495,0.00017966969,0.0001655567,0.00026707895,0.00014329448,0.0000035746477,0.00011652583,0.000155781,0.0000033963347],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011183289,0.00009981417,0.0010904897,0.000013684034,0.00004458502,0.000023174585,0.000032849104,0.00037309312,0.9928873,0.002831208,0.00007003493,0.0024219085],"study_design_scores_gemma":[0.00076524296,0.00018604934,0.00042319798,0.000009927249,0.000019585594,0.0001938824,0.00008219736,0.00026197624,0.9752154,0.0016993557,0.020945508,0.00019773038],"about_ca_topic_score_codex":0.000021364369,"about_ca_topic_score_gemma":0.000029922448,"teacher_disagreement_score":0.24011815,"about_ca_system_score_codex":0.00002374532,"about_ca_system_score_gemma":0.00014601188,"threshold_uncertainty_score":0.7326717},"labels":[],"label_agreement":null},{"id":"W3165474204","doi":"10.1007/978-1-0716-1538-6_15","title":"Use of Mitotic Protein Kinase Inhibitors and Phospho-Specific Antibodies to Monitor Protein Phosphorylation During the Cell Cycle","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of General Medical Sciences; National Cancer Institute","keywords":"Phosphorylation; Phosphatase; Biology; Kinase; Mitosis; Protein phosphorylation; Protein kinase A; Biochemistry; Cell biology; Cell cycle; Sequence motif; Autophagy-related protein 13; Cell; DNA","score_opus":0.012264834115649922,"score_gpt":0.29321930015933917,"score_spread":0.28095446604368923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165474204","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91920596,0.0041993465,0.07565206,0.00012596963,0.00011030531,0.000652375,0.000017167873,0.0000074184873,0.000029365114],"genre_scores_gemma":[0.6852758,0.00026025812,0.31393045,0.00008432956,0.000052253956,0.00010388134,0.000032579963,0.000031147694,0.00022931489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980295,0.00069398,0.00037154494,0.00053196633,0.00007188473,0.0003011686],"domain_scores_gemma":[0.9991576,0.00003629718,0.00012075533,0.00050810043,0.00011391369,0.00006334538],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003973495,0.00021432858,0.00026581905,0.0000788283,0.00007405561,0.000027687223,0.00015918023,0.00024485175,0.000006477284],"category_scores_gemma":[0.0002646621,0.00018520457,0.00009572544,0.00024056018,0.00015251621,0.0000052393143,0.00031609405,0.00016571002,0.0000013859209],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007894382,0.00007594818,0.001603694,0.0000564154,0.000024595909,0.000015676129,0.000084236526,0.00013547232,0.99305797,0.00017642438,0.000009532524,0.004681122],"study_design_scores_gemma":[0.00033441826,0.00013402221,0.0015406581,0.000046369863,0.000010154137,0.000009077417,0.000094388444,0.00005314106,0.99401057,0.00022531708,0.0033324647,0.00020941964],"about_ca_topic_score_codex":0.00007357875,"about_ca_topic_score_gemma":0.00002965211,"teacher_disagreement_score":0.23827839,"about_ca_system_score_codex":0.000022297547,"about_ca_system_score_gemma":0.000040036073,"threshold_uncertainty_score":0.7552423},"labels":[],"label_agreement":null},{"id":"W3165646758","doi":"10.1007/978-1-0716-1499-0_4","title":"Using tRNA Scaffold to Assist RNA Crystallization","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources; National Institute of General Medical Sciences","keywords":"Transfer RNA; Crystallization; Scaffold; Computational biology; RNA; Cell biology; Computer science; Biology; Chemistry; Genetics; Gene; Database","score_opus":0.041463126161580446,"score_gpt":0.39163375395237604,"score_spread":0.3501706277907956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165646758","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10081792,0.0010560555,0.8962612,0.00017575313,0.00027105198,0.00018109269,0.0000070436263,0.000011575579,0.0012182904],"genre_scores_gemma":[0.07191919,0.000047600406,0.9263874,0.00116317,0.00010054698,0.00003845691,0.000058070764,0.000038134356,0.00024739865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731416,0.001339878,0.0003130901,0.00060343614,0.00007790319,0.00035153914],"domain_scores_gemma":[0.9991744,0.000034607994,0.00007842042,0.0005080451,0.000103717204,0.000100807796],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008799537,0.00019674852,0.00026733472,0.00010895603,0.00005835414,0.000025319447,0.00022450094,0.0003327777,0.00006706016],"category_scores_gemma":[0.0007504549,0.00020722215,0.000119170705,0.0003251589,0.000044756584,0.000002403221,0.0002227371,0.00008081449,0.00000560646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029155042,0.000038862134,0.00028146707,0.000009428652,0.00003144256,0.000029973893,0.00001631223,0.00032914264,0.9799527,0.0024580841,0.000017046923,0.016806362],"study_design_scores_gemma":[0.00024403863,0.000112563604,0.000077485565,0.000019545227,0.000014980273,0.000033254746,0.000030363866,0.00012256026,0.98156035,0.004148257,0.013388509,0.00024808917],"about_ca_topic_score_codex":0.000019519994,"about_ca_topic_score_gemma":0.000019888039,"teacher_disagreement_score":0.03012622,"about_ca_system_score_codex":0.00003118601,"about_ca_system_score_gemma":0.0001132795,"threshold_uncertainty_score":0.8450274},"labels":[],"label_agreement":null},{"id":"W3165714208","doi":"10.1007/978-1-0716-1382-5_3","title":"Myofibroblast Markers and Microscopy Detection Methods in Cell Culture and Histology","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Myofibroblast; Fibroblast; Phenotype; Fibrosis; Immunofluorescence; Cell biology; Pathology; In vitro; Cell; Actin; Biology; Immunology; Medicine; Genetics; Antibody; Gene","score_opus":0.008931477317807688,"score_gpt":0.36345486531613713,"score_spread":0.35452338799832944,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3165714208","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09471274,0.0085729845,0.8952283,0.00011207315,0.00032638994,0.00013929488,0.0000062734944,0.000006885819,0.00089505495],"genre_scores_gemma":[0.041648302,0.0013120783,0.9559817,0.0004401345,0.000033582266,0.000038937513,0.00006261905,0.000028919798,0.00045372738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970371,0.0016650191,0.0003140539,0.00065625994,0.000029247412,0.000298282],"domain_scores_gemma":[0.99942964,0.00006640723,0.000084929736,0.0002936989,0.000055181543,0.00007014295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007860746,0.00020418817,0.0002954679,0.00014003477,0.000050197832,0.000018763069,0.000095062846,0.0004632332,0.000023604076],"category_scores_gemma":[0.00033022618,0.0002135736,0.00007140443,0.00020018301,0.000116743744,0.0000039266693,0.00023629575,0.00028965622,8.2716576e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057495556,0.000045979174,0.00037783405,0.000023238817,0.000021010912,0.000023516322,0.00005110296,0.0000066166076,0.97390974,0.0004008475,0.00001560065,0.025067007],"study_design_scores_gemma":[0.00047350046,0.00027229756,0.000219814,0.000011046332,0.000016020078,0.00017275395,0.00017529397,0.00041465042,0.9587752,0.0023585644,0.036897086,0.0002137681],"about_ca_topic_score_codex":0.000051272214,"about_ca_topic_score_gemma":0.00016159477,"teacher_disagreement_score":0.060753398,"about_ca_system_score_codex":0.00003242036,"about_ca_system_score_gemma":0.00004621756,"threshold_uncertainty_score":0.8709279},"labels":[],"label_agreement":null},{"id":"W3168656250","doi":"10.1007/978-1-0716-1433-4_13","title":"The Use of Reactive Oxygen Species Production by Succinate-Driven Reverse Electron Flow as an Index of Complex 1 Activity in Isolated Brown Adipose Tissue Mitochondria","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Mitochondrion; Brown adipose tissue; Reactive oxygen species; Adipose tissue; Thermogenin; Chemistry; Electron transport chain; Cell biology; Protein subunit; Biology; Biochemistry; Gene","score_opus":0.04141164565876893,"score_gpt":0.377212021777133,"score_spread":0.33580037611836405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3168656250","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91698754,0.0014423082,0.07941576,0.0009867057,0.0002709524,0.000749637,0.000021024216,0.000017817167,0.00010824511],"genre_scores_gemma":[0.6072708,0.00082911755,0.38938585,0.00025100104,0.00010007206,0.000055033088,0.00029751175,0.000059144397,0.0017515132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99600106,0.0026231436,0.00043850453,0.0004799074,0.00012328353,0.00033409562],"domain_scores_gemma":[0.99858516,0.00024923505,0.00023823936,0.0006156185,0.00024332776,0.00006843889],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067028485,0.00019810139,0.00067442446,0.00018228716,0.000039779497,0.0000061317683,0.00013543127,0.00027651072,0.000039334784],"category_scores_gemma":[0.0017083866,0.00016315929,0.000078867626,0.00063052366,0.00023121928,0.000088901754,0.00008088459,0.00043863495,0.0000015977438],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008806143,0.00030647116,0.00165139,0.000028358156,0.00013284865,0.00005595846,0.0003994157,0.000059408994,0.9774399,0.00032312254,0.00013514727,0.018587394],"study_design_scores_gemma":[0.00090430974,0.00056565617,0.015228107,0.00003980961,0.00010055558,0.00006658673,0.000087545464,0.0006185186,0.9441183,0.00075155427,0.037380014,0.00013901491],"about_ca_topic_score_codex":0.0007573967,"about_ca_topic_score_gemma":0.00040937375,"teacher_disagreement_score":0.30997008,"about_ca_system_score_codex":0.00006816112,"about_ca_system_score_gemma":0.00017227881,"threshold_uncertainty_score":0.66534424},"labels":[],"label_agreement":null},{"id":"W317408601","doi":"10.1007/978-1-62703-284-1_28","title":"Use of Histone Deacetylase Inhibitors to Examine the Roles of Bromodomain and Histone Acetylation in p300-Dependent Gene Expression","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Bromodomain; HDAC11; Acetylation; Histone deacetylase; Histone deacetylase 5; Histone Acetyltransferases; SAP30; HDAC4; HDAC10; Histone deacetylase 2; Histone; Biology; Histone acetyltransferase; PCAF; Histone H2A; Coactivator; Genetics; Histone methyltransferase; Gene; Transcription factor","score_opus":0.021706312077593458,"score_gpt":0.3567077641166567,"score_spread":0.3350014520390633,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W317408601","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8081445,0.0013123604,0.18965113,0.0002817387,0.0000839256,0.00048827965,0.000007282805,0.000003946572,0.000026799094],"genre_scores_gemma":[0.6939714,0.00011800235,0.3054155,0.00021573743,0.0000285128,0.00009966133,0.00004174559,0.00001918989,0.00009023234],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769694,0.0010709676,0.0005445772,0.00038180576,0.00009728182,0.00020840521],"domain_scores_gemma":[0.999126,0.00009035668,0.00020139977,0.00042118455,0.00009935936,0.000061677725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093283114,0.00017188683,0.0002914405,0.00021022386,0.000024710298,0.00000716772,0.00017705566,0.00024748506,0.000014525417],"category_scores_gemma":[0.00092707016,0.00013687248,0.00005772412,0.00020467842,0.00019549365,0.000009551033,0.0002501681,0.00012518995,9.392503e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006148564,0.00007098002,0.0014110778,0.000013511441,0.000009948271,0.0000012547531,0.00012091912,0.00015938283,0.9832913,0.00011050456,0.0000879266,0.014661663],"study_design_scores_gemma":[0.00049697416,0.00024886776,0.0025959508,0.000029928146,0.00000620761,0.000005967455,0.000065834785,0.00010223622,0.99514073,0.0003561109,0.0008113504,0.00013981643],"about_ca_topic_score_codex":0.00028202124,"about_ca_topic_score_gemma":0.000107625405,"teacher_disagreement_score":0.11576439,"about_ca_system_score_codex":0.000035648023,"about_ca_system_score_gemma":0.000033655033,"threshold_uncertainty_score":0.55814976},"labels":[],"label_agreement":null},{"id":"W3176967061","doi":"10.1007/978-1-0716-1503-4_1","title":"Pseudogenes: Four Decades of Discovery","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto; Princess Margaret Cancer Centre","funders":"","keywords":"Pseudogene; Biology; Gene; Genetics; Genome; Human genome; Computational biology; Evolutionary biology","score_opus":0.03717740580511838,"score_gpt":0.39258626900114335,"score_spread":0.355408863196025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3176967061","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00032490148,0.019599954,0.9292693,0.000077420904,0.0004805108,0.0005222217,0.00012408508,0.000013601935,0.049587984],"genre_scores_gemma":[0.0017183744,0.009183889,0.8093683,0.00071885245,0.00047629993,0.00016831089,0.0013789849,0.00048264116,0.17650434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99611765,0.00082185917,0.00084652397,0.0013257572,0.0002740701,0.0006141149],"domain_scores_gemma":[0.9977165,0.00010053307,0.00037301952,0.0014122564,0.00026763184,0.00013007889],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011631979,0.0006183782,0.0009888378,0.00044954775,0.000039557097,0.000027207281,0.00074303366,0.001957781,0.00018326416],"category_scores_gemma":[0.0005912674,0.00066290144,0.00063424034,0.00015346837,0.00040511435,0.0000036512295,0.00090239226,0.00074524345,0.000007718824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010222573,0.00003476827,0.000010049597,0.000098583354,0.00038719847,0.00015686236,0.000008796857,0.00013915639,0.9448273,0.04174399,0.00010967823,0.012381344],"study_design_scores_gemma":[0.00061473507,0.00041128055,0.000003690219,0.00016787938,0.000085199004,0.00011026379,0.0000131236675,0.000026132797,0.87651885,0.014740859,0.10670179,0.00060618453],"about_ca_topic_score_codex":0.000031575277,"about_ca_topic_score_gemma":0.000055442517,"teacher_disagreement_score":0.12691636,"about_ca_system_score_codex":0.00009140273,"about_ca_system_score_gemma":0.00059855264,"threshold_uncertainty_score":0.99958223},"labels":[],"label_agreement":null},{"id":"W3178181494","doi":"10.1007/978-1-0716-1315-3_16","title":"Triticale Isolated Microspore Culture for Doubled Haploid Production","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Microspore; Doubled haploidy; Triticale; Ploidy; Biology; Trichostatin A; Pollen; Stamen; Botany; Histone; Histone deacetylase; Genetics; Gene","score_opus":0.02376079598634057,"score_gpt":0.35245982550815835,"score_spread":0.3286990295218178,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3178181494","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0005176405,0.04924339,0.9262195,0.0009045185,0.0017781524,0.0016873368,0.00024257305,0.00004797407,0.019358916],"genre_scores_gemma":[0.0001319262,0.00232677,0.5009475,0.0005653727,0.0010475265,0.00016415755,0.010974281,0.00011877191,0.4837237],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9979547,0.00020742718,0.00044769834,0.0009982615,0.000062974366,0.0003289323],"domain_scores_gemma":[0.99896264,0.000020316644,0.00017008082,0.00050888077,0.00026819395,0.00006990738],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0004518261,0.0004166944,0.00055250776,0.000095495205,0.00007864816,0.000021915715,0.00021909978,0.0017025812,0.000035252913],"category_scores_gemma":[0.0002853681,0.00037291675,0.00029027904,0.00005220789,0.00014798457,0.0000023731689,0.000100849604,0.00034151,0.000004144379],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013420255,0.000033542954,0.0000059418653,0.000065479035,0.00015726963,0.000022478122,0.000024000681,0.000011852188,0.98223346,0.009707053,0.003633898,0.003970821],"study_design_scores_gemma":[0.00038990917,0.00021003156,5.8240136e-7,0.000048235503,0.000066218265,0.000079522375,0.0000055955097,0.000009017396,0.497115,0.0023652525,0.49941066,0.00029997856],"about_ca_topic_score_codex":0.000010543014,"about_ca_topic_score_gemma":0.0001350908,"teacher_disagreement_score":0.49577677,"about_ca_system_score_codex":0.000040367304,"about_ca_system_score_gemma":0.00016189775,"threshold_uncertainty_score":0.99987227},"labels":[],"label_agreement":null},{"id":"W3179479670","doi":"10.1007/978-1-0716-1441-9_12","title":"Highly Multiplexed Analysis of CRISPR Genome Editing Outcomes in Mammalian Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"CRISPR; Genome editing; Computational biology; Multiplexing; Biology; Genome; Computer science; Genetics; Gene; Telecommunications","score_opus":0.013667573441290465,"score_gpt":0.4000154391507505,"score_spread":0.38634786570946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3179479670","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3954064,0.0013004763,0.60276824,0.000067992165,0.00019061037,0.00008875078,0.000026773798,0.0000056060026,0.00014513808],"genre_scores_gemma":[0.47968805,0.00007185718,0.51979774,0.0001473415,0.00003335966,0.00001948238,0.00014456622,0.00002030123,0.0000772757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99794227,0.000589965,0.0005223142,0.0005175395,0.00006824877,0.00035965303],"domain_scores_gemma":[0.9991957,0.0000780163,0.00009657288,0.00049988244,0.000073730844,0.00005612679],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007390046,0.00019932188,0.0005704734,0.00037892887,0.000015050641,0.00000699057,0.00021872333,0.00027530998,0.000030752683],"category_scores_gemma":[0.00044963855,0.00020914956,0.00025857563,0.000751679,0.00006610985,0.0000015081677,0.00019797038,0.00015000605,8.840122e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010589499,0.00006241679,0.03228173,0.000018098375,0.00026112865,0.000035225923,0.00005978795,0.009460964,0.95621985,0.000103797815,0.0000021197884,0.0014842593],"study_design_scores_gemma":[0.00045425777,0.000059459966,0.02832663,0.000004889228,0.00010464362,0.0000027521255,0.00010530532,0.00075462286,0.968526,0.00009738493,0.0013641928,0.00019984467],"about_ca_topic_score_codex":0.00009403515,"about_ca_topic_score_gemma":0.00023964167,"teacher_disagreement_score":0.084281646,"about_ca_system_score_codex":0.000019615176,"about_ca_system_score_gemma":0.00004063554,"threshold_uncertainty_score":0.85288715},"labels":[],"label_agreement":null},{"id":"W3180444791","doi":"10.1007/978-1-0716-1669-7_10","title":"A Kinase Assay for Measuring the Activity of the NIK-IKK1 Complex Induced via the Noncanonical NF-κB Pathway","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"NF-κB Signaling Pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Kinase; IκB kinase; Cell biology; Biology; Signal transduction; Immune system; Phosphorylation; NF-κB; Cancer research; Context (archaeology); Immunology","score_opus":0.07240752252414527,"score_gpt":0.38125514406524696,"score_spread":0.3088476215411017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3180444791","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3672826,0.0006255884,0.62956804,0.0012118231,0.0003636653,0.0005657038,0.000038749873,0.000009094795,0.00033473404],"genre_scores_gemma":[0.8946921,0.000012753436,0.10383412,0.0010348526,0.00012613731,0.00017817302,0.000028831988,0.000041040286,0.0000519884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99323416,0.0051382594,0.00040827473,0.0006012086,0.0001582868,0.00045983083],"domain_scores_gemma":[0.9975666,0.0006289455,0.00024586133,0.0012940993,0.00021259535,0.000051925235],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039783833,0.00026715334,0.00038716206,0.00003667283,0.00019232824,0.000019403029,0.00088014203,0.00039279115,0.000012405173],"category_scores_gemma":[0.0027399382,0.00015479983,0.00038526522,0.00032450844,0.0003929857,0.0000023531989,0.00065444125,0.00043182838,8.963781e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007556895,0.00009207044,0.00038587267,0.0000192068,0.00010143724,0.000005834578,0.00006428593,0.000079893805,0.98070896,0.0011297032,0.000030927455,0.017306242],"study_design_scores_gemma":[0.000582693,0.00016436845,0.0008032434,0.000016781683,0.000038745227,0.00003445119,0.0000410736,0.0004179889,0.986951,0.0023608557,0.008395096,0.00019373672],"about_ca_topic_score_codex":0.00006344313,"about_ca_topic_score_gemma":0.00015124552,"teacher_disagreement_score":0.5274095,"about_ca_system_score_codex":0.00003951617,"about_ca_system_score_gemma":0.0003874569,"threshold_uncertainty_score":0.6312554},"labels":[],"label_agreement":null},{"id":"W3181017238","doi":"10.1007/978-1-0716-1331-3_17","title":"Doubled Haploidy for Cow Cockle (Saponaria vaccaria L.)","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Research Council (Canada); National Research Council Canada","funders":"","keywords":"Doubled haploidy; Microspore; Biology; Transformation (genetics); Botany; Ploidy; Stamen; Genetics; Pollen; Gene","score_opus":0.029802467552668067,"score_gpt":0.3619640654796357,"score_spread":0.33216159792696764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181017238","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023308015,0.023422666,0.91973424,0.00051181106,0.0014470014,0.0010795731,0.0002790593,0.0000315382,0.053261045],"genre_scores_gemma":[0.00015110038,0.0013541104,0.60747087,0.0012444094,0.0009568758,0.0002381336,0.013305906,0.00016905178,0.37510952],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99772686,0.00031241862,0.00050527405,0.0009885635,0.00008122163,0.0003856383],"domain_scores_gemma":[0.9987463,0.00007471634,0.00023036142,0.00065443106,0.00020520478,0.00008903557],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00065393414,0.00048212922,0.00066773937,0.00016112499,0.000080315585,0.00002833622,0.00035153597,0.001721494,0.00009588061],"category_scores_gemma":[0.0002514994,0.0004548353,0.00035324777,0.00005186575,0.000120437384,0.0000018764249,0.00020582923,0.00031871832,0.00000803356],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010195101,0.000024926709,0.000011633043,0.000040735424,0.0002545037,0.000033230404,0.000014162959,0.00003812388,0.9060948,0.08648499,0.0028173313,0.004083616],"study_design_scores_gemma":[0.0006956227,0.00021735861,0.0000019117585,0.000036267615,0.000092501716,0.000051117797,0.0000046475793,0.000036672376,0.30203205,0.0058723446,0.69053054,0.0004289924],"about_ca_topic_score_codex":0.000037482063,"about_ca_topic_score_gemma":0.00036016814,"teacher_disagreement_score":0.6877132,"about_ca_system_score_codex":0.00004479057,"about_ca_system_score_gemma":0.00026825335,"threshold_uncertainty_score":0.9997903},"labels":[],"label_agreement":null},{"id":"W3181213365","doi":"10.1007/978-1-0716-1335-1_6","title":"Doubled Haploidy for Fennel (Foeniculum vulgare Mill.) and Dill (Anethum graveolens L.)","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Saskatchewan Research Council (Canada)","funders":"","keywords":"Foeniculum; Anethum graveolens; Apiaceae; Biology; Crop; Botany; Horticulture; Agronomy","score_opus":0.0245762975307772,"score_gpt":0.3368980249300852,"score_spread":0.31232172739930797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181213365","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0025155926,0.097539,0.8548126,0.0011110643,0.0017795294,0.0022410518,0.0006618935,0.00006131048,0.03927792],"genre_scores_gemma":[0.0007703308,0.0065355864,0.6519225,0.0017575715,0.0012097765,0.00031710207,0.011243346,0.0002791338,0.32596463],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976403,0.0003097059,0.00047793842,0.0010811394,0.00007727701,0.0004136229],"domain_scores_gemma":[0.9988668,0.00006948608,0.00020814833,0.00057186023,0.000173142,0.00011056374],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0005721438,0.000528826,0.0007045089,0.00012803946,0.00009406642,0.000028974095,0.00025722972,0.0015492124,0.00003370231],"category_scores_gemma":[0.00020072696,0.00047561096,0.0002715598,0.000036219975,0.00021119598,0.0000021888554,0.0002411701,0.0003322314,0.0000028065522],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007408775,0.000021355998,0.00002146845,0.000079495636,0.00023930712,0.000042892752,0.000033271222,0.000013272743,0.97246844,0.019500362,0.001188041,0.006318034],"study_design_scores_gemma":[0.000892395,0.00032815267,0.0000073702095,0.0000747065,0.00013525371,0.00013436815,0.000014980481,0.000039821487,0.30301145,0.0063066375,0.68842435,0.000630527],"about_ca_topic_score_codex":0.000043693566,"about_ca_topic_score_gemma":0.00044003848,"teacher_disagreement_score":0.6872363,"about_ca_system_score_codex":0.000030176454,"about_ca_system_score_gemma":0.00013402641,"threshold_uncertainty_score":0.99976957},"labels":[],"label_agreement":null},{"id":"W3181395681","doi":"10.1007/7651_2021_406","title":"Rat-Induced Pluripotent Stem Cells-Derived Cardiac Myocytes in a Cell Culture Dish","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Heart, Lung, and Blood Institute; National Institutes of Health","keywords":"Embryoid body; Induced pluripotent stem cell; Embryonic stem cell; Cell biology; Myocyte; Biology; Stem cell; KOSR; Somatic cell; P19 cell; Reprogramming; Cellular differentiation; Molecular biology; Cell; Genetics","score_opus":0.02137186773792286,"score_gpt":0.34564868138264665,"score_spread":0.32427681364472377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3181395681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8917612,0.010406602,0.093848124,0.00026156637,0.0008685851,0.0006986331,0.000039964543,0.00002785729,0.002087498],"genre_scores_gemma":[0.6442426,0.0029876924,0.34813115,0.0007486334,0.00023981009,0.0003474122,0.00042788725,0.00015208039,0.0027227553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9933205,0.0037722038,0.00058083615,0.0012374292,0.00019478319,0.0008942224],"domain_scores_gemma":[0.9985181,0.000085861495,0.00012392747,0.0009246455,0.00016926913,0.00017820722],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011742166,0.00041215884,0.0006486839,0.00019089984,0.000060206767,0.000039958624,0.0005339145,0.00073299743,0.000029232775],"category_scores_gemma":[0.00019244148,0.00040538257,0.0003098778,0.0005620962,0.00013984143,0.0000052695295,0.00070207106,0.0005723599,0.00001884274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007564987,0.00017953686,0.0023721193,0.000057865967,0.00005780161,0.0002196574,0.00010045511,0.0001230484,0.9918007,0.000059945745,0.00010898472,0.0048442017],"study_design_scores_gemma":[0.0010711,0.00024261019,0.0002760769,0.000024800482,0.000017768918,0.000015627582,0.00037983645,0.000098351884,0.98388255,0.00022859225,0.013322302,0.0004403614],"about_ca_topic_score_codex":0.000062300634,"about_ca_topic_score_gemma":0.0000855934,"teacher_disagreement_score":0.25428304,"about_ca_system_score_codex":0.000100638565,"about_ca_system_score_gemma":0.00027256913,"threshold_uncertainty_score":0.9998398},"labels":[],"label_agreement":null},{"id":"W3182938201","doi":"10.1007/978-1-0716-1335-1_10","title":"Protocol for the Production of Doubled Haploid Plants of Brassica carinata","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Microspore; Brassica carinata; Doubled haploidy; Biology; Brassica; Ploidy; Botany; Crop; Agronomy; Biotechnology; Pollen; Stamen; Genetics","score_opus":0.05236229220611991,"score_gpt":0.39408592881871984,"score_spread":0.3417236366125999,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3182938201","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047300814,0.009949637,0.78154683,0.0010253193,0.0019107275,0.17429267,0.0004845202,0.000026525528,0.030290745],"genre_scores_gemma":[0.00068410276,0.00082448113,0.6280486,0.0003027799,0.0015010347,0.12009251,0.003576107,0.0002354045,0.244735],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986348,0.00020787196,0.000450464,0.00047872093,0.00007155806,0.00015656304],"domain_scores_gemma":[0.9987936,0.00006826816,0.00037831496,0.00055579346,0.00018224024,0.00002175777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000595929,0.0002342293,0.0004381575,0.00006901121,0.0000352994,0.0000043067776,0.00027074997,0.00064518495,0.000016257249],"category_scores_gemma":[0.000295113,0.00016281928,0.00018740754,0.00003064721,0.00019349177,0.0000013160931,0.00012737782,0.0001658218,2.8854134e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019105684,0.000030589934,0.000012189106,0.00016368272,0.00018478467,0.0000026438647,0.00001767778,0.000041251948,0.9815709,0.008893899,0.0007880648,0.008103244],"study_design_scores_gemma":[0.00031485266,0.00018992016,0.0000037788564,0.00007971604,0.000037329577,0.000019002224,0.000005209908,0.000007713825,0.6823006,0.0007935245,0.31612507,0.00012328709],"about_ca_topic_score_codex":0.000030735027,"about_ca_topic_score_gemma":0.00016875748,"teacher_disagreement_score":0.315337,"about_ca_system_score_codex":0.000013185001,"about_ca_system_score_gemma":0.0001877529,"threshold_uncertainty_score":0.6639578},"labels":[],"label_agreement":null},{"id":"W3183251193","doi":"10.1007/978-1-0716-1601-7_7","title":"Generation of Induced Dopaminergic Neurons from Human Fetal Fibroblasts","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Dopaminergic; Neuroscience; Fetus; Cell biology; Biology; Dopamine; Pregnancy; Genetics","score_opus":0.061805994122204694,"score_gpt":0.40507933701480514,"score_spread":0.3432733428926005,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3183251193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7718074,0.0007389733,0.22648746,0.00008491675,0.00014767855,0.00011279958,0.000021639695,0.00000571658,0.0005934489],"genre_scores_gemma":[0.74220294,0.00006347483,0.25648382,0.00014478144,0.00012319787,0.00002593373,0.00071449083,0.00002995354,0.00021140679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99675924,0.0018059328,0.00039951896,0.00061599485,0.00010575451,0.00031355178],"domain_scores_gemma":[0.9990669,0.000051797117,0.000106304426,0.000586282,0.000119893724,0.00006881326],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005082323,0.00017796828,0.00029357092,0.00010937677,0.000038997667,0.000010126351,0.00026453802,0.00032050858,0.00005912131],"category_scores_gemma":[0.00042947935,0.00018609173,0.0001276748,0.00023592604,0.0001344041,0.0000024839521,0.00036018,0.00019596082,0.0000037552882],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017864264,0.00008171672,0.0011162142,0.000010223002,0.00004727967,0.000045017874,0.000016455373,0.00015761878,0.99521625,0.00023632895,0.000037214762,0.003017828],"study_design_scores_gemma":[0.0005529764,0.0002504471,0.0011117399,0.000008612288,0.000010914521,0.000013993528,0.000019041943,0.0004086573,0.99569356,0.0005720766,0.0011900441,0.00016790416],"about_ca_topic_score_codex":0.000103466016,"about_ca_topic_score_gemma":0.00011338147,"teacher_disagreement_score":0.029996369,"about_ca_system_score_codex":0.000017230985,"about_ca_system_score_gemma":0.000108246684,"threshold_uncertainty_score":0.75886},"labels":[],"label_agreement":null},{"id":"W3185237824","doi":"10.1007/978-1-0716-1593-5_7","title":"Multicolor 3D Confocal Imaging of Thick Tissue Sections","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Confocal; Confocal microscopy; Multicellular organism; Microscopy; Fluorescence-lifetime imaging microscopy; Biomedical engineering; Fluorescence; Materials science; Optics; Chemistry; Cell; Medicine; Physics","score_opus":0.016582199218952685,"score_gpt":0.3997669936077226,"score_spread":0.3831847943887699,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3185237824","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008136273,0.0062832665,0.9646121,0.00006173646,0.00031351982,0.00041811587,0.00007224196,0.000031925276,0.028125703],"genre_scores_gemma":[0.0001831616,0.0007217607,0.98224485,0.00036304444,0.00009844983,0.000054214684,0.0003634856,0.00010668399,0.015864337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997603,0.0004102586,0.0006365028,0.0008837,0.00008815342,0.00037838178],"domain_scores_gemma":[0.99848056,0.00008076258,0.00031227915,0.0008294294,0.00022741161,0.00006958089],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00058176514,0.00044612144,0.0006998057,0.00022044827,0.000042141543,0.000009778062,0.00039495263,0.0010411713,0.000103862214],"category_scores_gemma":[0.00044047888,0.00048823695,0.00021188946,0.000067842884,0.00062702893,0.0000024367162,0.00047710532,0.0006082481,0.0000037673435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031345993,0.000029476056,0.00007087437,0.000043221436,0.00006979061,0.00005064868,0.000014813195,0.000021719234,0.96988505,0.011960685,0.00007335985,0.017749023],"study_design_scores_gemma":[0.00024169963,0.00019169148,0.000006187783,0.0000977081,0.000041607476,0.000058638732,0.000010975522,0.00003503643,0.8679835,0.0053140856,0.1256247,0.00039415184],"about_ca_topic_score_codex":0.000026216347,"about_ca_topic_score_gemma":0.000027973207,"teacher_disagreement_score":0.12555134,"about_ca_system_score_codex":0.000056658795,"about_ca_system_score_gemma":0.00018565226,"threshold_uncertainty_score":0.99975693},"labels":[],"label_agreement":null},{"id":"W3188585472","doi":"10.1007/978-1-0716-1617-8_16","title":"Preparation and Characterization of Quantum Dot-Peptide Conjugates Based on Polyhistidine Tags","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Bioconjugation; Peptide; Quantum dot; Conjugate; Nanotechnology; Bioanalysis; Chemistry; Förster resonance energy transfer; Combinatorial chemistry; Fluorescence; Biophysics; Materials science; Biochemistry; Biology","score_opus":0.012899570359415451,"score_gpt":0.36943564976219045,"score_spread":0.356536079402775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3188585472","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4388116,0.00016163556,0.56058496,0.00015346738,0.000038951464,0.000086146225,0.000018118008,0.000011542612,0.00013358882],"genre_scores_gemma":[0.68901944,0.0001331106,0.30990887,0.00041830153,0.000022956114,0.000009349504,0.00042626265,0.000011725177,0.00004999226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849397,0.0006175274,0.0002852272,0.0004047539,0.000050062634,0.00014848687],"domain_scores_gemma":[0.9993703,0.000042612286,0.00013920273,0.00030703758,0.00010885481,0.000031986554],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004393155,0.00014228561,0.00024767898,0.00009756894,0.000026582993,0.0000071625363,0.0000660508,0.00020393524,0.0000026958596],"category_scores_gemma":[0.00038239543,0.00013232755,0.000067279994,0.00017549164,0.00013403661,0.0000021472094,0.00005627686,0.00007645074,2.065002e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009875076,0.000057928417,0.0012250149,0.0000136079725,0.000019612036,0.0000057726597,0.0000066534917,0.000019028043,0.9940152,0.0007919409,0.000004337305,0.0037421617],"study_design_scores_gemma":[0.00025884737,0.0003730147,0.00067222305,0.000023245218,0.000018204886,0.000007808095,0.000008083051,0.0022816637,0.99378896,0.0006941384,0.0017335535,0.00014028743],"about_ca_topic_score_codex":0.000007048099,"about_ca_topic_score_gemma":0.0000057191487,"teacher_disagreement_score":0.25067607,"about_ca_system_score_codex":0.000010293319,"about_ca_system_score_gemma":0.000044632692,"threshold_uncertainty_score":0.5396161},"labels":[],"label_agreement":null},{"id":"W3193812814","doi":"10.1007/978-1-0716-1170-8_19","title":"44 Current Challenges in miRNomics","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Dicer; microRNA; Gene silencing; Computational biology; Biology; Untranslated region; RNA-induced silencing complex; RNA; Translation (biology); Messenger RNA; Cell biology; RNA interference; Genetics; Non-coding RNA; Gene","score_opus":0.04917209825564258,"score_gpt":0.40636962340761396,"score_spread":0.3571975251519714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193812814","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46815893,0.10752263,0.42166698,0.00052958954,0.0005811879,0.00026712305,0.000013781704,0.00001980789,0.001239975],"genre_scores_gemma":[0.24127224,0.009954383,0.7476003,0.0003434706,0.0001983678,0.00012559803,0.00038576638,0.00006762249,0.000052228213],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99753517,0.0012279988,0.00030567596,0.00058346766,0.00004444291,0.00030323057],"domain_scores_gemma":[0.9993102,0.000037412527,0.000067794695,0.0004793434,0.000050928153,0.000054345568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006909183,0.0001671756,0.0002308471,0.00011282337,0.000014716014,0.000007279368,0.00017687691,0.00025680344,0.000016004547],"category_scores_gemma":[0.00044216405,0.00018561386,0.00009771683,0.00016763038,0.00007655913,0.0000017429105,0.00021419975,0.00015841093,0.0000041980893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023153252,0.00009913294,0.002291832,0.0000255659,0.000016221004,0.00002350022,0.000025859263,0.00007640936,0.9108153,0.0020876077,0.000021266229,0.084494136],"study_design_scores_gemma":[0.00068097527,0.000058826587,0.006669317,0.000028687977,0.000009121731,0.000025596228,0.000047972015,0.00017252569,0.9363718,0.0053762933,0.05028614,0.00027273843],"about_ca_topic_score_codex":0.000004962926,"about_ca_topic_score_gemma":0.00006671963,"teacher_disagreement_score":0.32593334,"about_ca_system_score_codex":0.000043506567,"about_ca_system_score_gemma":0.000118944125,"threshold_uncertainty_score":0.75691134},"labels":[],"label_agreement":null},{"id":"W3193981472","doi":"10.1007/978-1-0716-1518-8_15","title":"Profiling the Human Oral Mycobiome in Tissue and Saliva Using ITS2 DNA Metabarcoding Compared to a Fungal-Specific Database","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salivary Gland Disorders and Functions","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Amplicon; Biology; Computational biology; Human Microbiome Project; DNA sequencing; Population; Fungus; Microbiology; Ribosomal RNA; DNA; Genetics; Gene; Metagenomics; Polymerase chain reaction; Medicine","score_opus":0.10951713044833955,"score_gpt":0.45298155893486386,"score_spread":0.3434644284865243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3193981472","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57082367,0.00375233,0.4240597,0.00046487385,0.00017302214,0.00035215286,0.000014429737,0.000017145527,0.0003427259],"genre_scores_gemma":[0.22251217,0.0000610304,0.7762058,0.0009320618,0.00006277337,0.000038507715,0.00012204862,0.000024160863,0.000041442738],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978416,0.0010232868,0.00032474872,0.00043489915,0.0000687548,0.00030672454],"domain_scores_gemma":[0.99925464,0.00019044091,0.000042280382,0.00038230044,0.000048198068,0.00008211493],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011426243,0.00015595577,0.00041776235,0.00024943694,0.00009804748,0.000020630581,0.00008634184,0.00009782024,0.00007285728],"category_scores_gemma":[0.0003362229,0.00011997013,0.000046260826,0.00069983234,0.00009159684,0.00002659796,0.00018203503,0.0002602931,0.0000027837082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004224491,0.00007669056,0.031946693,0.00002420273,0.000026377305,0.00022037598,0.0001522027,0.00002906631,0.96186376,0.0035947927,0.00002156872,0.0020020155],"study_design_scores_gemma":[0.0053491076,0.0003591593,0.024989843,0.0002796851,0.00023835123,0.00084098615,0.0033475477,0.003670059,0.93035805,0.0042669913,0.025554465,0.0007457452],"about_ca_topic_score_codex":0.00014138252,"about_ca_topic_score_gemma":0.00008103295,"teacher_disagreement_score":0.35214612,"about_ca_system_score_codex":0.00003790076,"about_ca_system_score_gemma":0.00005233805,"threshold_uncertainty_score":0.489224},"labels":[],"label_agreement":null},{"id":"W3195620144","doi":"10.1007/978-1-0716-1629-1_19","title":"Preparing Selective Nanozymes by Molecular Imprinting","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Nanomaterials in Catalysis","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Molecularly imprinted polymer; Chemistry; Nanotechnology; Molecular imprinting; Horseradish peroxidase; Coating; Nanomaterials; Substrate (aquarium); Catalysis; Combinatorial chemistry; Selectivity; Materials science; Enzyme; Biochemistry","score_opus":0.011743199039943652,"score_gpt":0.3811262067720258,"score_spread":0.36938300773208216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195620144","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33401918,0.0013781895,0.66284674,0.00005978207,0.00038302576,0.00012385177,0.00001228528,0.00007622399,0.0011006943],"genre_scores_gemma":[0.13424067,0.000027178114,0.86513025,0.0003578674,0.000025588184,0.00008527459,0.000030744453,0.000040426286,0.00006203435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955374,0.0022032468,0.0005530803,0.00096127257,0.00012265045,0.0006223387],"domain_scores_gemma":[0.9986223,0.00032695194,0.00020505341,0.00065012445,0.00012289635,0.0000726908],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017704355,0.00026644306,0.00055765896,0.00013047241,0.00008006663,0.00005151818,0.00041389547,0.0002503027,0.00015340811],"category_scores_gemma":[0.0020169902,0.0002779519,0.00012291365,0.0005797704,0.00017006203,0.00008337787,0.0005693044,0.00018073226,0.00002557239],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013557081,0.000042265907,0.00031496168,0.000017208562,0.000024252271,0.00007138103,0.000080268605,0.00017465164,0.9909548,0.0018474672,0.000019452802,0.0064396947],"study_design_scores_gemma":[0.00028014602,0.0000358497,0.000021685313,0.000017305987,0.000023503173,0.000045313205,0.000045796944,0.000096563635,0.9828856,0.014430092,0.001823163,0.00029497064],"about_ca_topic_score_codex":0.000041896372,"about_ca_topic_score_gemma":0.000007280529,"teacher_disagreement_score":0.20228346,"about_ca_system_score_codex":0.00013229727,"about_ca_system_score_gemma":0.00009425594,"threshold_uncertainty_score":0.9999673},"labels":[],"label_agreement":null},{"id":"W3195937633","doi":"10.1007/978-1-0716-1518-8_8","title":"Whole-Genome Sequencing of Pathogens in Saliva: A Target-Enrichment Approach for SARS-CoV-2","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton","funders":"","keywords":"Coronavirus; Genome; Virology; Isolation (microbiology); Biology; Pandemic; Outbreak; Whole genome sequencing; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Severe acute respiratory syndrome; Computational biology; Coronavirus disease 2019 (COVID-19); Medicine; Genetics; Gene; Disease; Bioinformatics; Infectious disease (medical specialty)","score_opus":0.08670521356868063,"score_gpt":0.41070304423666193,"score_spread":0.32399783066798127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3195937633","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27982843,0.0011030841,0.71753925,0.00007898586,0.00010316356,0.0004008277,0.000014193969,0.000025769594,0.00090628146],"genre_scores_gemma":[0.08857526,0.0000064220944,0.90952593,0.0016197044,0.00003879715,0.00012432007,0.00006306318,0.00003091034,0.000015616595],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974941,0.00090885983,0.00059003074,0.0005275011,0.000088727174,0.0003907905],"domain_scores_gemma":[0.9990458,0.0002777596,0.00014413886,0.00036739977,0.0001368417,0.00002806469],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018559302,0.00019202127,0.0006401505,0.0003371542,0.00002607967,0.000005644123,0.000103622115,0.0002499186,0.0000042248735],"category_scores_gemma":[0.002065124,0.00018817083,0.00017129291,0.00070389296,0.00008396553,0.000016256841,0.00009324414,0.00028538413,0.0000012113906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053376156,0.00012991428,0.0023801052,0.00013782507,0.000050323117,0.00013066501,0.0002755444,0.000053892723,0.99282104,0.00044974015,0.0000020079838,0.0035155828],"study_design_scores_gemma":[0.0014332741,0.00022077005,0.00026916608,0.000041997206,0.00003763426,0.00015581233,0.000300331,0.0038181606,0.98932767,0.0022636575,0.0019657959,0.00016574754],"about_ca_topic_score_codex":0.00005868085,"about_ca_topic_score_gemma":0.0000095231635,"teacher_disagreement_score":0.19198664,"about_ca_system_score_codex":0.00019440023,"about_ca_system_score_gemma":0.00019434093,"threshold_uncertainty_score":0.7673384},"labels":[],"label_agreement":null},{"id":"W3196148972","doi":"10.1007/978-1-0716-1629-1_11","title":"Molecularly Imprinted Polymers Coupled with Surface-Enhanced Raman Spectroscopy to Detect Chemical Hazards in Foods","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Analytical chemistry methods development","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; McGill University","funders":"","keywords":"Molecularly imprinted polymer; Surface-enhanced Raman spectroscopy; Molecular imprinting; Materials science; Solid phase extraction; Polymer; Raman spectroscopy; Sample preparation; Nanotechnology; Chemistry; Chromatography; Extraction (chemistry); Organic chemistry; Raman scattering; Selectivity; Catalysis","score_opus":0.013267723010971007,"score_gpt":0.35664417409279214,"score_spread":0.34337645108182113,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196148972","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30285367,0.00025715338,0.69346595,0.00024249847,0.000045413195,0.0001183644,0.0000048652355,0.000057762583,0.0029543117],"genre_scores_gemma":[0.09669602,0.000016398972,0.90245897,0.00042265016,0.000024306486,0.000073196505,0.000040534207,0.00007341927,0.0001945225],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99590504,0.0007113417,0.0007676369,0.0013277313,0.00026376508,0.001024498],"domain_scores_gemma":[0.998072,0.00044423985,0.00013010224,0.0008973652,0.0001436276,0.00031262657],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011938364,0.00052239886,0.00095181953,0.00013501532,0.000032635784,0.000038248807,0.00054957316,0.00056220364,0.0008023167],"category_scores_gemma":[0.0018792712,0.00051944994,0.00017147328,0.0011656039,0.000219935,0.000026053354,0.00040694102,0.0008941795,0.00000912711],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002600898,0.00008582127,0.0006067946,0.00006835688,0.00011924768,0.00045094077,0.00008767899,0.00007364669,0.9939187,0.0001413859,8.2394047e-7,0.004186483],"study_design_scores_gemma":[0.0014253572,0.00007333634,0.00008620908,0.000090117166,0.000035090165,0.000051837545,0.00011809836,0.0012951391,0.9944651,0.0015761903,0.00016029901,0.0006231889],"about_ca_topic_score_codex":0.000074367534,"about_ca_topic_score_gemma":0.000033020704,"teacher_disagreement_score":0.208993,"about_ca_system_score_codex":0.00052335527,"about_ca_system_score_gemma":0.0004392333,"threshold_uncertainty_score":0.9997257},"labels":[],"label_agreement":null},{"id":"W3196207398","doi":"10.1007/978-1-0716-1170-8_16","title":"Role of MicroRNAs in Extreme Animal Survival Strategies","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University","funders":"","keywords":"Biology; microRNA; Transcription factor; Adaptation (eye); Biogenesis; Aestivation; Adaptive evolution; Computational biology; Neuroscience; Ecology; Genetics; Gene","score_opus":0.05276927711386886,"score_gpt":0.3484352744300669,"score_spread":0.295665997316198,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3196207398","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94714564,0.0002754433,0.046431314,0.00009750653,0.000023651879,0.000045351153,0.0000041138737,0.0000057433194,0.005971247],"genre_scores_gemma":[0.63535374,0.000011570855,0.36454645,0.000056077683,0.000003910973,0.000005392907,0.000007136946,0.0000023159578,0.000013416052],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987826,0.0005654219,0.00019642785,0.00024253003,0.000041257812,0.00017177896],"domain_scores_gemma":[0.9997014,0.000115959854,0.000035288052,0.00011633265,0.0000059423,0.000025069372],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002805869,0.00007355422,0.00017513451,0.000019246552,0.000009136487,0.0000031452296,0.0001357551,0.00009757529,0.00038917107],"category_scores_gemma":[0.00015948754,0.00006013713,0.0000455265,0.0002844176,0.00018886242,0.00002032461,0.00018494923,0.00011130879,0.000007918852],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001164354,0.00008803414,0.0066418005,0.0000018036393,0.000002585404,0.000009540999,0.000029746427,0.00011332316,0.9851681,0.0035304036,0.0000012826981,0.004401748],"study_design_scores_gemma":[0.000113352944,0.00004634317,0.05056965,0.00000302841,0.0000016464841,0.0000016629243,0.00017408552,0.00020274906,0.85614353,0.09231115,0.0003597158,0.000073053205],"about_ca_topic_score_codex":0.00018122251,"about_ca_topic_score_gemma":0.00012148684,"teacher_disagreement_score":0.31811512,"about_ca_system_score_codex":0.000022312044,"about_ca_system_score_gemma":0.000012953883,"threshold_uncertainty_score":0.42611504},"labels":[],"label_agreement":null},{"id":"W3197991164","doi":"10.1007/7651_2021_431","title":"Bioreactor-Based De-epithelialization of Long-Segment Tracheal Grafts","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Decellularization; Bioreactor; Ex vivo; Biomedical engineering; Tissue engineering; Cartilage; Chemistry; Sodium dodecyl sulfate; Medicine; Anatomy; Chromatography; In vitro; Biochemistry","score_opus":0.025601266640639178,"score_gpt":0.4102211337378504,"score_spread":0.38461986709721124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3197991164","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.108182415,0.0050284835,0.88574743,0.00063696323,0.00021129001,0.0001064003,0.0000030319497,0.000018494666,0.00006547562],"genre_scores_gemma":[0.2418241,0.000039257047,0.7576384,0.00016346297,0.000062516374,0.000014543115,0.000077206925,0.000016653938,0.00016387236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99873126,0.0005759389,0.00024929963,0.00019949481,0.00006768387,0.00017635542],"domain_scores_gemma":[0.99950385,0.00009422992,0.000049652856,0.00020815396,0.00007814097,0.000065992754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006459476,0.00010625183,0.00033445025,0.00013848736,0.000009886338,0.0000014237048,0.00004160135,0.00014553893,0.00005095588],"category_scores_gemma":[0.0005473716,0.00008669349,0.000068752015,0.0002793899,0.00008867127,0.000004424442,0.000014176683,0.00014426405,7.122673e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025517853,0.0001258216,0.01236718,0.00007990753,0.000033425316,0.00018692264,0.00008788254,0.00055005786,0.96202683,0.0010696942,0.0000061481733,0.023440586],"study_design_scores_gemma":[0.0010922651,0.00026699418,0.00923802,0.00007517893,0.00004661248,0.000052696374,0.000022602624,0.0023639163,0.9856169,0.00014064196,0.0010073276,0.00007681541],"about_ca_topic_score_codex":0.00002348727,"about_ca_topic_score_gemma":0.000003956926,"teacher_disagreement_score":0.13364169,"about_ca_system_score_codex":0.000054389144,"about_ca_system_score_gemma":0.00011140242,"threshold_uncertainty_score":0.3535258},"labels":[],"label_agreement":null},{"id":"W3198118873","doi":"10.1007/978-1-0716-1450-1_6","title":"Short Read-Length Next Generation DNA Sequencing of Antibody CDR Combinations from Phage Selection Outputs","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Heteroduplex; Biopanning; Phage display; Complementarity determining region; Biology; DNA sequencing; Computational biology; DNA; Genetics; Molecular biology; Antibody; Peptide library; Gene; Peptide sequence; Immunoglobulin light chain","score_opus":0.11507130304969462,"score_gpt":0.46857463277727807,"score_spread":0.35350332972758347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198118873","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60508096,0.0011683382,0.39166674,0.0005095762,0.00016162307,0.00015352119,0.00001763721,0.0000151900285,0.0012264096],"genre_scores_gemma":[0.47900966,0.00033586944,0.51895046,0.00031924408,0.00011661299,0.000017016248,0.00078235974,0.000017455679,0.00045132797],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997609,0.0012017285,0.0003963343,0.00037959428,0.00015747515,0.00025585966],"domain_scores_gemma":[0.9991242,0.00025465983,0.000059572936,0.00023062056,0.00025723377,0.00007367054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075694727,0.00013933293,0.0004136222,0.00019411092,0.000058388232,0.000010976012,0.000087193876,0.00020022667,0.00017520755],"category_scores_gemma":[0.0006254289,0.00012876678,0.00011421407,0.00044583628,0.00010922849,0.00003936909,0.00008450784,0.0003135527,0.000004977516],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003535537,0.000133844,0.013805046,0.000029857163,0.00009508743,0.00010350308,0.00011407668,0.000015359727,0.9516438,0.0048503163,0.000018798546,0.02915495],"study_design_scores_gemma":[0.0004903015,0.00020018361,0.008704005,0.00004128315,0.00004897259,0.00006248361,0.000075478245,0.006145435,0.9803492,0.0024311994,0.0013322313,0.000119266966],"about_ca_topic_score_codex":0.00039902847,"about_ca_topic_score_gemma":0.000065545464,"teacher_disagreement_score":0.12728372,"about_ca_system_score_codex":0.00009997856,"about_ca_system_score_gemma":0.00020463429,"threshold_uncertainty_score":0.5250957},"labels":[],"label_agreement":null},{"id":"W3198311300","doi":"10.1007/978-1-0716-1558-4_7","title":"Exercise Training Protocols to Improve Obesity, Glucose Homeostasis, and Subclinical Inflammation","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Exercise and Physiological Responses","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Aerobic exercise; Medicine; Glucose homeostasis; Subclinical infection; Weight loss; Obesity; Inflammation; Type 2 diabetes; Physical therapy; Diabetes mellitus; Intensive care medicine; Physical medicine and rehabilitation; Insulin resistance; Bioinformatics; Internal medicine; Endocrinology; Biology","score_opus":0.13708495195520531,"score_gpt":0.5306077561445118,"score_spread":0.3935228041893065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3198311300","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024575138,0.9585649,0.026192132,0.00007275025,0.00009527987,0.014701246,0.000021090953,0.000035707042,0.00007115356],"genre_scores_gemma":[0.0000012625713,0.698465,0.29294127,0.00016514839,0.000089387104,0.008160358,0.00010995529,0.00003448513,0.00003315608],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9940683,0.003354453,0.0010543955,0.0009375369,0.00012516302,0.0004601475],"domain_scores_gemma":[0.9970387,0.0017098425,0.00025354943,0.0006254222,0.000098135126,0.00027431818],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002771321,0.00047092553,0.0037329663,0.00033627314,0.000038714115,0.000027196906,0.00021974837,0.0010517762,0.0000485994],"category_scores_gemma":[0.0061175614,0.00034888336,0.0004794415,0.00056845974,0.000143833,0.00001907532,0.0004084118,0.00078970846,0.000013364374],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012462857,0.000078930556,0.0000061144456,0.0036392603,0.000059793,0.00018990638,0.000054505872,1.3183119e-7,0.0084213065,0.00033521128,0.000006941537,0.98708326],"study_design_scores_gemma":[0.00079540774,0.0012388923,0.000049649138,0.023994407,0.00066252553,0.00008308055,0.000033411274,0.0000046711775,0.00782052,0.0024083396,0.96231997,0.00058911403],"about_ca_topic_score_codex":0.000007884723,"about_ca_topic_score_gemma":0.0000016228689,"teacher_disagreement_score":0.9864942,"about_ca_system_score_codex":0.00006994564,"about_ca_system_score_gemma":0.0004494418,"threshold_uncertainty_score":0.9998963},"labels":[],"label_agreement":null},{"id":"W3199032163","doi":"10.1007/978-1-0716-1775-5_15","title":"In Vivo Cytotoxicity by α-GalCer-transactivated NK Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Cytotoxic T cell; Cytotoxicity; Janus kinase 3; Natural killer T cell; Lymphokine-activated killer cell; MHC class I; Cell biology; Interleukin 21; Interleukin 12; Effector; Biology; Cytolysis; Major histocompatibility complex; CD49b; Flow cytometry; Immunology; Chemistry; In vitro; Antigen; Biochemistry","score_opus":0.011839304585267968,"score_gpt":0.32555200577132126,"score_spread":0.3137127011860533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199032163","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.103466034,0.0036957904,0.8816496,0.00053575606,0.0050104363,0.00027188697,0.00001718051,0.000063284584,0.00529],"genre_scores_gemma":[0.4660155,0.002095142,0.42746937,0.01764435,0.00010351246,0.00039716906,0.0008973588,0.00023393107,0.08514367],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956156,0.0030377521,0.00043646529,0.00047950025,0.000017805343,0.00041286144],"domain_scores_gemma":[0.999269,0.00025451466,0.00008843609,0.0003122997,0.000058450325,0.000017278688],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00067397195,0.00020283468,0.0003956099,0.00019782575,0.000046833527,0.000008424645,0.00016084123,0.00056786824,0.0048591476],"category_scores_gemma":[0.0002098032,0.00020625416,0.00011688625,0.00039456712,0.00012792482,0.000059055124,0.000057279278,0.0006438338,0.00012580515],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000122040125,0.00020688666,0.00021036818,0.000008959405,0.000054216525,0.000034016124,0.00009641531,0.000015510825,0.9951308,0.00030784498,0.0024814466,0.001331492],"study_design_scores_gemma":[0.0009888097,0.00008727238,0.000041834883,0.000013461255,0.000008611828,0.00004698471,0.00009176397,0.000016460615,0.87202203,0.00037808678,0.12612422,0.0001804712],"about_ca_topic_score_codex":0.00021619524,"about_ca_topic_score_gemma":0.00002930578,"teacher_disagreement_score":0.45418024,"about_ca_system_score_codex":0.00009661611,"about_ca_system_score_gemma":0.000055062916,"threshold_uncertainty_score":0.99605054},"labels":[],"label_agreement":null},{"id":"W3199164280","doi":"10.1007/978-1-0716-1566-9_15","title":"Modeling Multicomponent Interventions in Network Meta-Analysis","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mental Health Research Topics","field":"Psychology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"","keywords":"Psychological intervention; Meta-analysis; Intervention (counseling); Computer science; Component (thermodynamics); Key (lock); Medicine; Management science; Risk analysis (engineering); Engineering; Nursing","score_opus":0.5029481450092456,"score_gpt":0.6311726135742325,"score_spread":0.12822446856498693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199164280","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.012175751,0.016522713,0.9683375,0.0008492787,0.00032287702,0.00026852655,0.000007874625,0.000016444601,0.0014990809],"genre_scores_gemma":[0.057011113,0.000053908065,0.94121593,0.0007215712,0.000030729763,0.00031779523,0.00006592202,0.000019047253,0.00056397525],"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9877257,0.010137855,0.00079854426,0.00060442847,0.00009721819,0.00063625857],"domain_scores_gemma":[0.99867034,0.0004348996,0.00007236177,0.0006632419,0.000059063394,0.00010010865],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0044081914,0.00015902621,0.0009474385,0.00045339557,0.00003850961,0.000011008332,0.00026237592,0.00022127302,0.0026324785],"category_scores_gemma":[0.00036148162,0.0001495946,0.0009193005,0.0013828145,0.000059005044,0.000015282303,0.00025178096,0.00052847783,0.000028320319],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028882362,0.0036572565,0.02909797,0.00039948334,0.1383414,0.0035558406,0.0024876918,0.4357786,0.04753546,0.26630285,0.00009716704,0.07245744],"study_design_scores_gemma":[0.0055027837,0.0006375629,0.00975873,0.000090544425,0.05646541,0.0001092296,0.0019082694,0.72898835,0.008400494,0.17937548,0.0068496885,0.0019134479],"about_ca_topic_score_codex":0.0009308625,"about_ca_topic_score_gemma":0.0014644418,"teacher_disagreement_score":0.29320976,"about_ca_system_score_codex":0.00010366151,"about_ca_system_score_gemma":0.00003811854,"threshold_uncertainty_score":0.9982793},"labels":[],"label_agreement":null},{"id":"W3199389162","doi":"10.1007/978-1-0716-1566-9_18","title":"Challenges in Comparative Meta-Analysis of the Accuracy of Multiple Diagnostic Tests","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital","funders":"National Institute for Health and Care Research","keywords":"Ranking (information retrieval); Meta-analysis; Computer science; Diagnostic test; Diagnostic accuracy; Sensitivity (control systems); Rank (graph theory); Test (biology); Data mining; Machine learning; Statistics; Mathematics; Medicine; Engineering; Pathology","score_opus":0.8883174913934042,"score_gpt":0.6534958129495543,"score_spread":0.23482167844384993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199389162","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18284926,0.102079846,0.7070793,0.002362252,0.00023126774,0.0011346451,0.0000647831,0.0000024532724,0.0041962205],"genre_scores_gemma":[0.6927654,0.00017038157,0.30679438,0.00011389942,0.000003016556,0.0000641135,0.0000042259735,0.0000042267984,0.000080312915],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9081974,0.0837613,0.0060738754,0.0008644894,0.000908097,0.00019484421],"domain_scores_gemma":[0.902167,0.08916863,0.0038461308,0.0039167833,0.0008585367,0.000042920332],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.080837786,0.00022170598,0.007514534,0.00070640445,0.000019400353,0.00002464047,0.0014746384,0.00012884545,0.001271598],"category_scores_gemma":[0.29643604,0.00009592449,0.004323292,0.0050060465,0.00017105429,0.00003249954,0.00035171336,0.00017816115,0.000012073476],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020860378,0.0010175414,0.47575036,0.00016528735,0.15018995,0.00006561142,0.0069868043,0.022194,0.2505398,0.04332371,0.00018173172,0.04956431],"study_design_scores_gemma":[0.00087033585,0.00013735823,0.54458225,0.000044984245,0.13756002,0.00001478747,0.004993271,0.028564334,0.18566105,0.087981544,0.008903889,0.00068618986],"about_ca_topic_score_codex":0.000046757003,"about_ca_topic_score_gemma":0.0013930216,"teacher_disagreement_score":0.5099162,"about_ca_system_score_codex":0.000014373427,"about_ca_system_score_gemma":0.00006522134,"threshold_uncertainty_score":0.99964136},"labels":[],"label_agreement":null},{"id":"W3199413822","doi":"10.1007/978-1-0716-1566-9_12","title":"Network Meta-Analysis","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":89,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital","funders":"","keywords":"Pairwise comparison; Ranking (information retrieval); Consistency (knowledge bases); Meta-analysis; Psychological intervention; Computer science; Transitive relation; Psychology; Artificial intelligence; Medicine; Mathematics","score_opus":0.8334794902093988,"score_gpt":0.6467193604131654,"score_spread":0.18676012979623346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3199413822","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041785528,0.018115867,0.96932715,0.0015138207,0.00021245175,0.00019106873,0.000006797892,0.000004017957,0.010210981],"genre_scores_gemma":[0.003941516,0.000016509606,0.986818,0.0028843468,0.000038056114,0.00006466153,0.000017801185,0.0000100651605,0.0062090294],"study_design_codex":"meta_analysis","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.85016054,0.13828474,0.0079951435,0.0017279824,0.0013755577,0.00045600007],"domain_scores_gemma":[0.98226094,0.009095621,0.0022294982,0.005470751,0.0008251687,0.00011801965],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.22970816,0.0003127186,0.009247614,0.0005903157,0.000063876956,0.00025611612,0.0015790048,0.00021302153,0.03629211],"category_scores_gemma":[0.059034918,0.00015354772,0.00983473,0.008441956,0.00008250935,0.000037815833,0.00035999002,0.00023782828,0.0005699822],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013027717,0.00025079265,0.054289952,0.000030951433,0.5102083,0.0006194883,0.00036366895,0.034550894,0.046357926,0.27745673,0.017718492,0.058139764],"study_design_scores_gemma":[0.00015342234,0.000031566728,0.0014507743,0.0000011938698,0.18239717,0.000025860305,0.00013790732,0.0073281787,0.003456716,0.53398013,0.27059147,0.0004455846],"about_ca_topic_score_codex":0.000013011439,"about_ca_topic_score_gemma":0.000070923066,"teacher_disagreement_score":0.32781112,"about_ca_system_score_codex":0.000018098843,"about_ca_system_score_gemma":0.0000615914,"threshold_uncertainty_score":0.9918589},"labels":[],"label_agreement":null},{"id":"W3200052130","doi":"10.1007/978-1-0716-1759-5_6","title":"Evaluating Methylation of the Oxytocin Receptor Gene and the Oxytocin Intergenic Region","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroendocrine regulation and behavior","field":"Psychology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Douglas Mental Health University Institute; McGill University; Jewish General Hospital","funders":"Canadian Institutes of Health Research","keywords":"Oxytocin receptor; Oxytocin; DNA methylation; Epigenetics; CpG site; Vasopressin; Biology; Gene; Genetics; Methylation; Vasopressin receptor; Buccal swab; Receptor; Neuroscience; Gene expression","score_opus":0.09915598213149922,"score_gpt":0.5034934267744571,"score_spread":0.40433744464295784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200052130","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7774921,0.0016222632,0.21461825,0.0044789095,0.0009067931,0.00048554316,0.000002574548,0.000015266543,0.00037831138],"genre_scores_gemma":[0.47186333,0.000056642162,0.52349937,0.0013334438,0.0001013891,0.00023515875,0.000019559147,0.000047714362,0.0028434063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98985463,0.009095031,0.00042973197,0.000347471,0.000082852675,0.00019030049],"domain_scores_gemma":[0.99856013,0.0005899368,0.00021126127,0.000524681,0.00009104243,0.000022961205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015510296,0.00012561945,0.00028392673,0.00007439452,0.0000535794,0.000007332658,0.00019042389,0.00009991455,0.00019962566],"category_scores_gemma":[0.0009226673,0.00007822045,0.0001395633,0.00038759352,0.00027332746,0.000013313706,0.0001811627,0.00024811662,0.000003092097],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008304237,0.00003567686,0.003031999,0.000005540459,0.00003343514,0.000007750839,0.00040323712,0.000013140493,0.90939945,0.01394731,0.000046999376,0.07299244],"study_design_scores_gemma":[0.0026427347,0.00012039872,0.014003989,0.000019684368,0.00010042129,0.000192256,0.00030215454,0.00042204556,0.9667319,0.012244533,0.0030676653,0.00015220449],"about_ca_topic_score_codex":0.000036971425,"about_ca_topic_score_gemma":0.000012376038,"teacher_disagreement_score":0.3088811,"about_ca_system_score_codex":0.000022784305,"about_ca_system_score_gemma":0.000033160206,"threshold_uncertainty_score":0.31897372},"labels":[],"label_agreement":null},{"id":"W3200322861","doi":"10.1007/978-1-0716-1783-0_16","title":"Advancing Our Understanding of Brain Disorders: Research Using Postmortem Brain Tissue","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurological disorders and treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre for Movement Disorders","funders":"","keywords":"Subventricular zone; Neuroscience; Progenitor cell; Neural stem cell; Deep brain stimulation; Lateral ventricles; Substantia nigra; Human brain; Stem cell; Biology; Pathology; Medicine; Parkinson's disease; Disease; Cell biology","score_opus":0.14909126560315977,"score_gpt":0.5383973971432148,"score_spread":0.389306131540055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200322861","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18085752,0.0017828312,0.803821,0.011550433,0.00013771844,0.00036834122,0.000005405523,0.000019578065,0.0014571361],"genre_scores_gemma":[0.399344,0.00008632899,0.598361,0.0019934163,0.000022461274,0.000013161807,0.000025852118,0.000031853033,0.00012192844],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9958844,0.0026467466,0.00034248212,0.00048200326,0.00015069389,0.00049364445],"domain_scores_gemma":[0.99869084,0.0007250095,0.00006831955,0.00034519474,0.0000796382,0.00009099106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017817832,0.00015036842,0.0004780215,0.00025613932,0.0000637933,0.0000070335564,0.00009823612,0.00020608194,0.000036709767],"category_scores_gemma":[0.0026750916,0.00013221803,0.00009794266,0.0007399739,0.00012912965,0.000021477848,0.00016970739,0.00038626557,0.0000019170539],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008605372,0.00027416123,0.014580484,0.00006627627,0.00006267469,0.0005646929,0.000087730616,0.000034279987,0.9653149,0.0066871597,0.000043236687,0.01219832],"study_design_scores_gemma":[0.005265816,0.002960039,0.0034855884,0.0003049839,0.000102348786,0.00017206087,0.003979728,0.0013783566,0.46196446,0.5171684,0.0027717664,0.00044647534],"about_ca_topic_score_codex":0.00009805561,"about_ca_topic_score_gemma":0.000057137106,"teacher_disagreement_score":0.51048124,"about_ca_system_score_codex":0.00012343492,"about_ca_system_score_gemma":0.00012820173,"threshold_uncertainty_score":0.5391695},"labels":[],"label_agreement":null},{"id":"W3200530198","doi":"10.1007/978-1-0716-1566-9_3","title":"Fixed- and Random-Effects Models","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":142,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Raincoast Conservation Foundation; University of British Columbia","funders":"","keywords":"Random effects model; Statistics; Fixed effects model; Variance (accounting); Mathematics; Estimator; Sample size determination; Meta-analysis; Econometrics; Standard error; Panel data","score_opus":0.7734362790399716,"score_gpt":0.6695250715523596,"score_spread":0.10391120748761196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200530198","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[3.5960625e-7,0.50729465,0.49036956,0.000017007018,0.00024963196,0.00078736694,0.000005485045,0.0000020951804,0.0012738162],"genre_scores_gemma":[1.13911575e-7,0.5528014,0.44612008,0.00011199973,0.00002539942,0.00019246306,0.000017949176,0.000018865732,0.00071174843],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.7888997,0.19724701,0.010174583,0.0022103856,0.0010492597,0.000419027],"domain_scores_gemma":[0.9614932,0.02933012,0.0042444696,0.004428119,0.00034707,0.00015704245],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.19708794,0.00073411834,0.021405911,0.00095096335,0.00005499061,0.00033753557,0.0019040314,0.00076740986,0.0008381822],"category_scores_gemma":[0.089478604,0.00034653075,0.0045899334,0.002038803,0.00014233179,0.000047769387,0.00064009917,0.000567464,0.00016314957],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[7.6947106e-7,0.000014584618,0.000004679703,0.0017655552,0.0003319424,0.00006179827,0.000024705068,0.000006511427,0.000020371952,0.010676056,0.00042507006,0.98666793],"study_design_scores_gemma":[0.00021496436,0.000023414363,2.901102e-7,0.0014148806,0.0010567921,0.00007923706,0.0000110206,0.00079774344,0.000009035842,0.043730956,0.95234483,0.00031685512],"about_ca_topic_score_codex":0.000006099539,"about_ca_topic_score_gemma":0.0000032752632,"teacher_disagreement_score":0.9863511,"about_ca_system_score_codex":0.000038265138,"about_ca_system_score_gemma":0.00016587223,"threshold_uncertainty_score":0.9998987},"labels":[],"label_agreement":null},{"id":"W3200561904","doi":"10.1007/978-1-0716-1566-9_1","title":"Principles of Systematic Reviews and Meta-analyses","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Impact","funders":"","keywords":"Systematic review; Meta-analysis; Management science; Computer science; Key (lock); Quality (philosophy); Data science; Psychology; Engineering; Medicine; MEDLINE; Epistemology; Political science; Pathology","score_opus":0.9319206982819868,"score_gpt":0.6913803697221741,"score_spread":0.24054032855981267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200561904","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014412209,0.10223253,0.8914457,0.00027232224,0.00008439452,0.0008957098,0.0000058238643,0.0000017727447,0.0036205288],"genre_scores_gemma":[0.0027520312,0.0003776006,0.9930548,0.00038873777,0.0000075345492,0.00018165864,0.000003363409,0.000008907925,0.0032253724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.80106694,0.18052876,0.01575425,0.001247198,0.0011418271,0.0002610048],"domain_scores_gemma":[0.97533244,0.013250587,0.00611736,0.0043861656,0.00081998395,0.00009345892],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.24756117,0.00030331837,0.01190159,0.0004243119,0.000031231386,0.00011440857,0.0010130896,0.00014132229,0.002706177],"category_scores_gemma":[0.2694897,0.00012659677,0.0029627131,0.0016626111,0.00012301815,0.00004116143,0.00031839765,0.00013739537,0.00008238639],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007637142,0.00022758677,0.007146587,0.019744292,0.016388183,0.00013105253,0.000812436,0.000258906,0.7341953,0.20818056,0.00052779756,0.012379656],"study_design_scores_gemma":[0.0011019857,0.00031927743,0.0020238915,0.0014075881,0.11540592,0.0005340903,0.002410121,0.012613235,0.30511612,0.25707564,0.29995263,0.0020395187],"about_ca_topic_score_codex":0.000008157234,"about_ca_topic_score_gemma":0.000018155726,"teacher_disagreement_score":0.4290792,"about_ca_system_score_codex":0.000011606567,"about_ca_system_score_gemma":0.000045233446,"threshold_uncertainty_score":0.9982055},"labels":[],"label_agreement":null},{"id":"W3200598357","doi":"10.1007/978-1-0716-1566-9_9","title":"Meta-analysis of Pragmatic and Explanatory Trials","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Michael's Hospital; St. Joseph’s Healthcare Hamilton; Impact","funders":"","keywords":"Pragmatism; Pooling; Meta-analysis; Epistemology; Protocol (science); Clinical trial; Data science; Management science; Psychology; Econometrics; Computer science; Artificial intelligence; Medicine; Alternative medicine; Philosophy; Economics","score_opus":0.9284096078952677,"score_gpt":0.7116538636687895,"score_spread":0.21675574422647825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200598357","genre_codex":"review","genre_gemma":"review","domain_codex":"methods","domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[4.360189e-7,0.59253937,0.40610594,0.0000241679,0.00009917667,0.00075669127,0.00008444923,0.0000012852811,0.00038846867],"genre_scores_gemma":[1.6770987e-7,0.57279456,0.42634702,0.00007077278,0.000009185351,0.0002275887,0.000072349314,0.000015263766,0.0004631016],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.4760245,0.48642853,0.033061244,0.0023113622,0.0018187916,0.00035553775],"domain_scores_gemma":[0.87661207,0.092388384,0.023299212,0.006832136,0.0007171754,0.00015101067],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","insufficient_payload"],"consensus_categories":["metaresearch","metaepi_broad"],"category_scores_codex":[0.5752852,0.00080425007,0.091096565,0.004044551,0.000033630324,0.00019280567,0.002184346,0.0007194611,0.011604577],"category_scores_gemma":[0.25001138,0.00034304603,0.03629018,0.007539203,0.00018405307,0.00003600838,0.00047990822,0.00042480524,0.00004968287],"study_design_candidate":"meta_analysis","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[5.62913e-7,0.000032275155,0.000010407797,0.0016255181,0.36506432,0.000024260955,0.00005703846,0.000008893175,0.000026739823,0.007464876,0.00022692293,0.6254582],"study_design_scores_gemma":[0.000034403358,0.00001208181,5.748283e-7,0.00008632685,0.47051978,0.00000850767,0.000033504653,0.00007216738,0.0000051767483,0.0033881636,0.52566165,0.00017767135],"about_ca_topic_score_codex":0.000012830332,"about_ca_topic_score_gemma":0.000014135177,"teacher_disagreement_score":0.6252805,"about_ca_system_score_codex":0.00003107687,"about_ca_system_score_gemma":0.0002192833,"threshold_uncertainty_score":0.9999021},"labels":[],"label_agreement":null},{"id":"W3200905621","doi":"10.1007/978-1-0716-1566-9_14","title":"Software to Conduct a Meta-Analysis and Network Meta-Analysis","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":22,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; University of Toronto; McMaster University; Impact","funders":"","keywords":"Computer science; Software; Key (lock); Meta-analysis; Software engineering; Software review; Software analytics; Data science; Software development; Software construction; Computer security; Operating system; Medicine","score_opus":0.9005687967232088,"score_gpt":0.674769665411702,"score_spread":0.22579913131150675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200905621","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[1.2686051e-7,0.5065372,0.49194062,0.00015095712,0.00009162061,0.0010032639,0.0001259095,0.0000060526804,0.00014426462],"genre_scores_gemma":[2.3227604e-7,0.35700276,0.6379944,0.0009015275,0.000037227397,0.000908915,0.00018324426,0.000043990985,0.002927674],"study_design_codex":"meta_analysis","study_design_gemma":"meta_analysis","domain_scores_codex":[0.72062457,0.24966666,0.020564636,0.005569743,0.0026089374,0.0009654258],"domain_scores_gemma":[0.94014364,0.034341667,0.010649028,0.012867162,0.0014400551,0.00055843574],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","bibliometrics","insufficient_payload"],"consensus_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"category_scores_codex":[0.30745608,0.0019612804,0.12694126,0.0063136388,0.00016661691,0.0010230871,0.0045769457,0.0011541256,0.03773619],"category_scores_gemma":[0.0854191,0.00088743784,0.13150638,0.04030207,0.0002150579,0.00007499702,0.0016427749,0.0009495446,0.00038908146],"study_design_candidate":"meta_analysis","study_design_consensus":"meta_analysis","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[6.494046e-7,0.000024697649,0.000027004562,0.0002818501,0.8703239,0.00006120856,0.000029256054,0.0004989738,0.000001743237,0.0011188023,0.00079314964,0.12683876],"study_design_scores_gemma":[0.000018283277,0.000016156346,9.858318e-7,0.0000073535357,0.5283929,0.00001181901,0.000011826993,0.000044082426,0.0000012376089,0.0020608136,0.46902835,0.00040617428],"about_ca_topic_score_codex":0.0000894955,"about_ca_topic_score_gemma":0.00031232229,"teacher_disagreement_score":0.4682352,"about_ca_system_score_codex":0.000074856485,"about_ca_system_score_gemma":0.00025026235,"threshold_uncertainty_score":0.99935764},"labels":[],"label_agreement":null},{"id":"W3200935939","doi":"10.1007/978-1-0716-1566-9_6","title":"Systematic Versus Rapid Versus Scoping Reviews","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Work & Health; Queen's University; Public Health Ontario; University of Toronto; St. Michael's Hospital","funders":"","keywords":"Systematic review; Strengths and weaknesses; Management science; Engineering ethics; Knowledge management; Psychology; Data science; Computer science; Engineering; Political science; MEDLINE; Social psychology","score_opus":0.7774259058805992,"score_gpt":0.6470958519684872,"score_spread":0.13033005391211205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3200935939","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0008628843,0.074351504,0.91064703,0.00028151085,0.0024806568,0.0012213577,0.000002343948,0.0000065183012,0.0101461625],"genre_scores_gemma":[0.00067375053,0.00071051973,0.9968594,0.0004409218,0.00006124656,0.00023729667,0.000010651455,0.000018567294,0.00098769],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.8391826,0.14653316,0.011069017,0.0015243288,0.0012300566,0.00046079478],"domain_scores_gemma":[0.9635902,0.024309335,0.0045431247,0.0066044237,0.0007757612,0.00017717769],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch","insufficient_payload"],"category_scores_codex":[0.21280654,0.0003703914,0.006567945,0.00043573673,0.00007781528,0.00027623927,0.0016414066,0.00022501496,0.004830026],"category_scores_gemma":[0.31342223,0.00020066653,0.0020623188,0.002431447,0.0000897571,0.000064329324,0.00035061757,0.000261523,0.0016270861],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045565894,0.00054042874,0.0025744878,0.040985767,0.004772638,0.0010710515,0.002075802,0.00041737582,0.33774456,0.16464892,0.010154375,0.43455893],"study_design_scores_gemma":[0.024728462,0.0025905827,0.0005890821,0.05823243,0.009196431,0.000494179,0.00880651,0.028351696,0.11772638,0.14260055,0.5989058,0.007777879],"about_ca_topic_score_codex":0.0000044096228,"about_ca_topic_score_gemma":0.000026392585,"teacher_disagreement_score":0.58875144,"about_ca_system_score_codex":0.00006560739,"about_ca_system_score_gemma":0.0001223628,"threshold_uncertainty_score":0.9991503},"labels":[],"label_agreement":null},{"id":"W3201538524","doi":"10.1007/978-1-0716-1783-0_15","title":"Generating Cerebral Organoids from Human Pluripotent Stem Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Organoid; Induced pluripotent stem cell; Human brain; Human Induced Pluripotent Stem Cells; Neuroscience; Biology; Embryonic stem cell; Computational biology; Cell biology; Gene; Genetics","score_opus":0.026795806359911568,"score_gpt":0.36436987905136387,"score_spread":0.3375740726914523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201538524","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5483275,0.0023816277,0.44801626,0.00014176799,0.00032394927,0.00018125938,0.000035700315,0.000018818473,0.0005731024],"genre_scores_gemma":[0.10664368,0.0001568656,0.8891694,0.0010226687,0.0003525508,0.00006979768,0.0005578018,0.00009844715,0.0019287881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9948353,0.002632865,0.0005555325,0.0011143549,0.00017032833,0.0006915772],"domain_scores_gemma":[0.99858063,0.00007162162,0.00011992652,0.0009169233,0.00015466136,0.0001562078],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010147652,0.00032245886,0.00042887457,0.0001179746,0.00011903984,0.000047244546,0.0004974877,0.0005129692,0.00017636722],"category_scores_gemma":[0.0001480277,0.00033374978,0.00019635832,0.00030105902,0.00015893417,0.0000035559294,0.0007766872,0.000381003,0.000025974143],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018574288,0.00009076833,0.0021285636,0.000015101733,0.00009240905,0.00016426767,0.000035113073,0.0003377678,0.990257,0.0002311166,0.000113891925,0.006515386],"study_design_scores_gemma":[0.000770507,0.00015037034,0.00018308373,0.000014308161,0.000016968774,0.00002165889,0.000078600635,0.00044606935,0.98808956,0.00071690825,0.009153693,0.00035828457],"about_ca_topic_score_codex":0.00010776179,"about_ca_topic_score_gemma":0.000084156876,"teacher_disagreement_score":0.44168386,"about_ca_system_score_codex":0.00006077494,"about_ca_system_score_gemma":0.00017605672,"threshold_uncertainty_score":0.9999114},"labels":[],"label_agreement":null},{"id":"W3201785961","doi":"10.1007/978-1-0716-1740-3_8","title":"Exploring Candidate Human Synthetic Lethal Interactions Through siRNA and Quantitative Imaging-Based Approaches","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Identification (biology); CRISPR; Computational biology; Computer science; Pairwise comparison; Drug candidate; Artificial intelligence; Biology; Gene; Genetics","score_opus":0.10853526287953771,"score_gpt":0.452959814622651,"score_spread":0.34442455174311326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201785961","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2832324,0.0017565312,0.7141172,0.0001726439,0.00013858001,0.00007714494,0.0000066535445,0.000011215453,0.00048760735],"genre_scores_gemma":[0.5063007,0.00006035904,0.4933198,0.00011697026,0.000029590912,0.00006267416,0.00006316184,0.00002295679,0.000023778412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983863,0.0005316107,0.0002354417,0.0005236131,0.000042492877,0.00028050263],"domain_scores_gemma":[0.999449,0.0000774869,0.00004835565,0.00033336066,0.000042220785,0.000049576636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036901495,0.00018983264,0.00022481651,0.00007702102,0.00006686969,0.000020754629,0.000111460125,0.00007817505,0.000011777859],"category_scores_gemma":[0.00028843703,0.0002005849,0.00008083049,0.0001391371,0.00014294536,0.0000057190587,0.0001421438,0.00014584168,9.244801e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013151591,0.000039081766,0.0010188309,0.000022749638,0.000039575636,0.00003630045,0.0001515397,0.0010935939,0.99111474,0.0021940877,0.000003857746,0.004272491],"study_design_scores_gemma":[0.00038596065,0.000085344494,0.0005976793,0.000025903295,0.000024148629,0.00006124657,0.00048739766,0.0022594042,0.9920957,0.0010799762,0.0026450963,0.00025210672],"about_ca_topic_score_codex":0.00005947418,"about_ca_topic_score_gemma":0.000059789767,"teacher_disagreement_score":0.2230683,"about_ca_system_score_codex":0.000017951646,"about_ca_system_score_gemma":0.00004466281,"threshold_uncertainty_score":0.81796145},"labels":[],"label_agreement":null},{"id":"W3201934972","doi":"10.1007/978-1-0716-1740-3_7","title":"Identification of Synthetic Lethal Interactions Using High-Throughput, Arrayed CRISPR/Cas9-Based Platforms","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"","keywords":"CRISPR; Computational biology; Cas9; False positive paradox; Scalability; Throughput; Computer science; Identification (biology); High-throughput screening; Synthetic lethality; DNA; Gene; Biology; DNA repair; Genetics; Artificial intelligence; Database","score_opus":0.022400510321548016,"score_gpt":0.4425861793562006,"score_spread":0.4201856690346526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3201934972","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3502143,0.00045732365,0.64879775,0.000059022605,0.00032718494,0.000082000486,0.00001119934,0.0000071107174,0.000044117376],"genre_scores_gemma":[0.6173728,0.000020439411,0.38235444,0.000080844475,0.000038395614,0.000015422876,0.00007138474,0.00002085591,0.000025419411],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984415,0.0002861497,0.00048467665,0.00046200654,0.000067842644,0.00025781806],"domain_scores_gemma":[0.99908,0.00006704132,0.00013024219,0.00054428354,0.000120984085,0.000057457648],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056324905,0.00017644456,0.0002727578,0.00012637838,0.000036197256,0.000010555218,0.00016928843,0.0002082569,0.000032409458],"category_scores_gemma":[0.00070952845,0.0001863005,0.00014027613,0.00024733768,0.00010269353,0.0000033494503,0.00010229023,0.00015718011,0.0000017741248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022436685,0.00007097047,0.00039527685,0.000031262618,0.000046990728,0.000012711833,0.000040521467,0.011614099,0.98472476,0.00044154088,0.0000061084365,0.0025933278],"study_design_scores_gemma":[0.00036720367,0.000070830996,0.00033001776,0.000021470909,0.000034292618,0.00004651035,0.000085953005,0.0053326767,0.9917636,0.0012660251,0.0004925318,0.0001889015],"about_ca_topic_score_codex":0.000041461724,"about_ca_topic_score_gemma":0.000020130754,"teacher_disagreement_score":0.2671585,"about_ca_system_score_codex":0.00002732786,"about_ca_system_score_gemma":0.00011635247,"threshold_uncertainty_score":0.7597114},"labels":[],"label_agreement":null},{"id":"W3202198091","doi":"10.1007/978-1-0716-2609-2_6","title":"Probing Conformational Dynamics of Antibodies with Geometric Simulations","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Molecular dynamics; Dihedral angle; Dynamics (music); Protein dynamics; Domain (mathematical analysis); Protein structure; Chemistry; Statistical physics; Biological system; Computer science; Physics; Computational chemistry; Mathematics; Hydrogen bond; Molecule","score_opus":0.010710053634596666,"score_gpt":0.3348583359144966,"score_spread":0.32414828227989995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202198091","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23543648,0.000311804,0.76337934,0.00005385306,0.00005874977,0.00018922862,0.0000873666,0.0000053739896,0.00047782675],"genre_scores_gemma":[0.598403,0.000007982086,0.4008996,0.000104461265,0.000009473415,0.000028303546,0.00050631404,0.0000106516345,0.00003025602],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988699,0.00036766156,0.0002621751,0.00022630248,0.000086634966,0.00018731655],"domain_scores_gemma":[0.99947107,0.000047038404,0.00014477334,0.00024544832,0.000068619775,0.00002303241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004407816,0.00011789935,0.00018853477,0.0002587558,0.00007881003,0.0000044276053,0.00020283421,0.00008889087,0.000027775504],"category_scores_gemma":[0.00014125607,0.00010944698,0.00005163034,0.0004513076,0.00012268311,0.0000025829036,0.00023924859,0.00014770956,1.4409007e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108477005,0.000053926557,0.015998572,0.000025346371,0.000079430676,0.0000046204977,0.000059112972,0.05467134,0.9053598,0.015100649,0.0000057272287,0.008533006],"study_design_scores_gemma":[0.004028911,0.00338602,0.00741277,0.000026657808,0.00010584125,0.0003043293,0.000776073,0.08193339,0.8486794,0.041089185,0.0108915325,0.0013658843],"about_ca_topic_score_codex":0.000018957107,"about_ca_topic_score_gemma":0.00002403346,"teacher_disagreement_score":0.36296648,"about_ca_system_score_codex":0.000033337506,"about_ca_system_score_gemma":0.00008804323,"threshold_uncertainty_score":0.4463118},"labels":[],"label_agreement":null},{"id":"W3202251009","doi":"10.1007/978-1-0716-1740-3_5","title":"RNA Interference (RNAi) Screening in Cultured Drosophila Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"RNA interference; Biology; Drosophila melanogaster; Schneider 2 cells; Gene; Computational biology; Gene silencing; Genome; Function (biology); Functional genomics; Genetic screen; Cell biology; Phenotype; Genetics; RNA; Genomics","score_opus":0.025691187852289583,"score_gpt":0.36841805503682806,"score_spread":0.3427268671845385,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202251009","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2854393,0.002757611,0.7091373,0.00021375292,0.00038128675,0.00013519195,0.000011275724,0.0000112008875,0.0019130488],"genre_scores_gemma":[0.32214525,0.0005643123,0.67509544,0.0013416864,0.000106459804,0.00004817243,0.00014158498,0.000032677774,0.0005244472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99720967,0.001078374,0.00043903463,0.00075221097,0.00006508168,0.00045562966],"domain_scores_gemma":[0.99915695,0.00004265343,0.00009145428,0.0005283526,0.00010673577,0.00007382815],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006496071,0.00025548128,0.00035353913,0.00013917296,0.000030331414,0.000024623108,0.00039164646,0.00041990294,0.000053345182],"category_scores_gemma":[0.00035286587,0.00025624316,0.00014905403,0.00031939265,0.00012067938,0.0000044946473,0.00037001175,0.00031831194,0.000010496894],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058469726,0.00006377986,0.0022724909,0.0000095173355,0.00003400037,0.00012534535,0.00006624679,0.00016594803,0.9836907,0.0002734183,0.000090124784,0.013149997],"study_design_scores_gemma":[0.00056637934,0.00017658494,0.00051972363,0.00004603086,0.000008280914,0.000032238564,0.00012943,0.00017643056,0.99252015,0.0017532238,0.003774641,0.0002968665],"about_ca_topic_score_codex":0.000054048865,"about_ca_topic_score_gemma":0.0001304416,"teacher_disagreement_score":0.036705934,"about_ca_system_score_codex":0.000018852417,"about_ca_system_score_gemma":0.00008744594,"threshold_uncertainty_score":0.999989},"labels":[],"label_agreement":null},{"id":"W3202268534","doi":"10.1007/978-1-0716-1740-3_13","title":"Identification of Drug Resistance Genes Using a Pooled Lentiviral CRISPR/Cas9 Screening Approach","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Biology; Computational biology; Gene; Cas9; Genome editing; Genome; Genetics; Genetic screen; Phenotype","score_opus":0.02266510570125842,"score_gpt":0.4145856804927474,"score_spread":0.391920574791489,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202268534","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17581098,0.009499835,0.81422204,0.000032354477,0.00013207081,0.00010935764,0.000007914388,0.0000075484236,0.00017788404],"genre_scores_gemma":[0.27101105,0.00011895304,0.72843075,0.00004601625,0.000045146808,0.000016356142,0.00006725253,0.000024583534,0.00023990145],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979408,0.00071259966,0.00046354276,0.00052639795,0.00007803,0.0002786556],"domain_scores_gemma":[0.9991786,0.000029202782,0.00013493598,0.0004992389,0.00011839262,0.000039660285],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093404826,0.00017463797,0.00028371363,0.00010747956,0.00003792581,0.000013034077,0.00020247615,0.00018709358,0.0000047896388],"category_scores_gemma":[0.0003013326,0.00019597074,0.00013799517,0.00028698068,0.000094678224,0.0000029574328,0.00017367328,0.00012016074,3.40938e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027608028,0.00004504758,0.0009418511,0.00005402813,0.000060676655,0.0000075281328,0.00005140619,0.0027750249,0.9913411,0.00037945496,0.000010272796,0.0043059797],"study_design_scores_gemma":[0.0003560061,0.000015311736,0.00032090265,0.000017541739,0.00003715028,0.00001709494,0.00013597542,0.0030700786,0.99423534,0.00043148382,0.0011657039,0.0001974021],"about_ca_topic_score_codex":0.000013745007,"about_ca_topic_score_gemma":0.000015619464,"teacher_disagreement_score":0.095200084,"about_ca_system_score_codex":0.0000131006955,"about_ca_system_score_gemma":0.000057784655,"threshold_uncertainty_score":0.7991455},"labels":[],"label_agreement":null},{"id":"W3202670970","doi":"10.1007/978-1-0716-1740-3_12","title":"Machine Learning to Identify Gene Interactions from High-Throughput Mutant Crosses","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Phenotype; Mutant; Gene; Biology; Genome; Genetics; Mutagenesis; Computational biology; Multiplicative function; Selection (genetic algorithm); Throughput; Cutoff; Computer science; Machine learning; Mathematics","score_opus":0.01849744476070582,"score_gpt":0.3896497919435485,"score_spread":0.3711523471828427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202670970","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21161857,0.0019365886,0.78494126,0.00031344395,0.0006313371,0.00011438889,0.00005548504,0.000014139229,0.0003747804],"genre_scores_gemma":[0.21947986,0.00027360357,0.777188,0.0016062069,0.00020128592,0.000036646907,0.00085897517,0.000034819004,0.00032059444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789685,0.00066972454,0.00044752946,0.000545649,0.000060746843,0.00037950053],"domain_scores_gemma":[0.99910015,0.0000816881,0.00011022045,0.0005089726,0.00009513014,0.00010383946],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000526089,0.00022197362,0.00031341586,0.00008029434,0.00009094206,0.000051259616,0.0002561018,0.00025889897,0.00013070091],"category_scores_gemma":[0.00045543408,0.00022647233,0.00012729433,0.00023597926,0.00007555227,0.0000040754067,0.00050377066,0.00033077548,0.000025871592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003603347,0.000041348852,0.0009903936,0.0000050524577,0.00009254118,0.000038814804,0.000095775446,0.0013121711,0.97903776,0.0004756385,0.00005720746,0.017817277],"study_design_scores_gemma":[0.00048968795,0.00012851173,0.000768667,0.000015461554,0.000024506564,0.000048196416,0.00009381007,0.00091790385,0.9229177,0.007246997,0.06703414,0.00031440146],"about_ca_topic_score_codex":0.00024991194,"about_ca_topic_score_gemma":0.00021754454,"teacher_disagreement_score":0.06697693,"about_ca_system_score_codex":0.000031271367,"about_ca_system_score_gemma":0.000076256605,"threshold_uncertainty_score":0.92352736},"labels":[],"label_agreement":null},{"id":"W3202709547","doi":"10.1007/978-1-0716-1740-3_16","title":"Inferring Copy Number from Triple-Negative Breast Cancer Patient Derived Xenograft scRNAseq Data Using scCNA","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill Genome Centre; McGill University; McGill University Health Centre","funders":"","keywords":"Triple-negative breast cancer; Breast cancer; Cancer research; Cell; Biology; Cancer; Computational biology; Transcriptome; Cell growth; Gene expression; Gene; Genetics","score_opus":0.05656946391896752,"score_gpt":0.40210834114254074,"score_spread":0.34553887722357324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202709547","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5684293,0.0013836679,0.4287802,0.000084004,0.00053508685,0.00015535863,0.0004936966,0.0000127602325,0.00012597098],"genre_scores_gemma":[0.3252773,0.00039510152,0.6720049,0.0010309828,0.00018421737,0.000028281695,0.0010031663,0.0000582972,0.000017789805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99656,0.0013477807,0.00048295932,0.001021963,0.00010658828,0.00048073928],"domain_scores_gemma":[0.9984872,0.00008382054,0.00015413499,0.0009881101,0.00016758508,0.00011919032],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039782908,0.00032495157,0.0004445515,0.00006297742,0.000094899966,0.00003830877,0.0004890573,0.00040477255,0.00017404938],"category_scores_gemma":[0.00035767764,0.00033308336,0.00012858275,0.00028362998,0.00020491314,0.000009842309,0.00061019673,0.000291655,0.0000034938548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014401815,0.0001190798,0.024875505,0.000010479413,0.00020481444,0.000056693352,0.00009315758,0.00020453452,0.95831347,0.00003280238,0.000029722512,0.01591571],"study_design_scores_gemma":[0.001251754,0.000057478694,0.0015215995,0.00005435643,0.000057372043,0.000049782837,0.00011491101,0.0015433813,0.99158025,0.0006721003,0.0026653772,0.0004316525],"about_ca_topic_score_codex":0.0023039693,"about_ca_topic_score_gemma":0.00068597705,"teacher_disagreement_score":0.2432247,"about_ca_system_score_codex":0.000058968348,"about_ca_system_score_gemma":0.00028780833,"threshold_uncertainty_score":0.99991214},"labels":[],"label_agreement":null},{"id":"W3202757447","doi":"10.1007/978-1-0716-1740-3_18","title":"Computational Prediction of Chemical Tools for Identification and Validation of Synthetic Lethal Interaction Networks","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Synthetic lethality; CRISPR; Computational biology; Chemical space; In silico; Identification (biology); Relevance (law); Lethality; Computer science; Biology; Drug discovery; Bioinformatics; Genetics; DNA repair; Gene","score_opus":0.04105360723950688,"score_gpt":0.39827775874722593,"score_spread":0.357224151507719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202757447","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.103571765,0.000115609204,0.8956575,0.00017096978,0.00028293315,0.00015622085,0.000010696721,0.000011303795,0.000022993332],"genre_scores_gemma":[0.3810236,0.0000034436314,0.61884916,0.00001594209,0.000011063707,0.000020823292,0.00007131309,0.0000035876583,0.00000109418],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9979163,0.0010884237,0.00047951125,0.0003293707,0.00008657765,0.00009981498],"domain_scores_gemma":[0.9972335,0.0020875917,0.00022289422,0.00019055177,0.00024511275,0.000020359552],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015342548,0.00007981387,0.00020584388,0.00013183143,0.000015449863,0.000026053935,0.0001528548,0.00009955719,0.0000023153518],"category_scores_gemma":[0.0013671214,0.00008933067,0.00006427356,0.0003073322,0.00007592209,0.00017689068,0.000119766715,0.00008552249,1.0259887e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019560046,0.0000674194,0.00028000926,0.0000389176,0.000025123629,9.3733826e-7,0.00010307829,0.21677576,0.6022679,0.084581904,0.0000020302152,0.09583737],"study_design_scores_gemma":[0.00017059006,0.000027617885,0.00088539504,0.000015395472,0.000007816796,0.00001656829,0.000010838371,0.5092568,0.4141682,0.07538843,0.000012435631,0.000039938255],"about_ca_topic_score_codex":0.000003028607,"about_ca_topic_score_gemma":1.3108463e-7,"teacher_disagreement_score":0.292481,"about_ca_system_score_codex":0.0000331095,"about_ca_system_score_gemma":0.000061426326,"threshold_uncertainty_score":0.3642799},"labels":[],"label_agreement":null},{"id":"W3202783076","doi":"10.1007/978-1-0716-1740-3_3","title":"Systematic High-Content Screening of Fluorescently Tagged Yeast Double Mutant Strains","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; University of Toronto","funders":"","keywords":"Yeast; Mutant; Biology; Saccharomyces cerevisiae; Green fluorescent protein; Budding yeast; Subcellular localization; Computational biology; Cell biology; Genetics; Cytoplasm; Gene","score_opus":0.05112405176203951,"score_gpt":0.38116227554440846,"score_spread":0.33003822378236897,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202783076","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40721184,0.0037313951,0.58772564,0.00010963471,0.00022429205,0.0005513845,0.000043756023,0.000009067973,0.00039300197],"genre_scores_gemma":[0.5273161,0.00016867455,0.47172445,0.00013720931,0.00006273636,0.00010425461,0.00015966521,0.000038044687,0.0002888811],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968997,0.0013449424,0.0005885416,0.000550884,0.00016453065,0.0004513931],"domain_scores_gemma":[0.9988257,0.000041056624,0.00014492609,0.0006351113,0.00024601555,0.000107152664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011946188,0.0002157077,0.00051629223,0.00012571659,0.000037682654,0.000016412127,0.0003516932,0.00028472868,0.000038073864],"category_scores_gemma":[0.000559214,0.00019469939,0.00018851398,0.00030038093,0.00016659754,0.0000019237063,0.00036630314,0.0002104201,0.0000038292706],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009114267,0.00010683956,0.0006946035,0.0007550932,0.00015411823,0.000058062426,0.000035084453,0.00014800749,0.99491304,0.0014590502,0.000005257432,0.0015796892],"study_design_scores_gemma":[0.0011928254,0.00022472064,0.00047142524,0.00029010387,0.000029418426,0.00004370558,0.0001760206,0.00018587081,0.9967074,0.00030114854,0.00017725263,0.00020011369],"about_ca_topic_score_codex":0.0000672392,"about_ca_topic_score_gemma":0.000042951102,"teacher_disagreement_score":0.12010423,"about_ca_system_score_codex":0.000018682156,"about_ca_system_score_gemma":0.00013991451,"threshold_uncertainty_score":0.79396105},"labels":[],"label_agreement":null},{"id":"W3202982215","doi":"10.1007/978-1-0716-1740-3_1","title":"Quantitative Genetic Screens for Mapping Bacterial Pathways and Functional Networks","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; University of Saskatchewan","funders":"Canadian Institutes of Health Research","keywords":"Mutant; Pairwise comparison; Biology; Computational biology; Gene; Genetics; Genetic screen; Genetic Fitness; Strain (injury); Replica; Gene mapping; Computer science; Artificial intelligence; Chromosome; Geography","score_opus":0.03730979353986242,"score_gpt":0.3380916449980746,"score_spread":0.3007818514582122,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3202982215","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22763288,0.004723005,0.7671133,0.00006706907,0.0002354108,0.00014699831,0.000011636421,0.0000067849123,0.00006288763],"genre_scores_gemma":[0.072136894,0.00026746438,0.92639875,0.000333856,0.00025743616,0.00008379718,0.00041876893,0.000033923803,0.000069115864],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997634,0.0009426715,0.00033382155,0.0006732634,0.00004895687,0.00036726616],"domain_scores_gemma":[0.9992251,0.00011608557,0.00010054019,0.00033920148,0.00014190548,0.00007716332],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070085353,0.00020632756,0.0003249266,0.00008976468,0.00007679312,0.000020014282,0.00010090389,0.00032509465,0.000025729307],"category_scores_gemma":[0.0003745168,0.00021987438,0.00016549075,0.00022039759,0.00014502708,0.0000018717881,0.00019147963,0.000105879066,6.7693026e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008732337,0.000025962003,0.0038099233,0.000010941734,0.00016441163,0.000010522239,0.000014104677,0.0033578954,0.981674,0.0016121417,0.00007192148,0.009160815],"study_design_scores_gemma":[0.003749713,0.0011272199,0.035074983,0.00004676719,0.0002526181,0.00020235912,0.00034591786,0.048206158,0.85422444,0.013621042,0.0417569,0.0013918827],"about_ca_topic_score_codex":0.0000048201487,"about_ca_topic_score_gemma":0.00003364649,"teacher_disagreement_score":0.15928543,"about_ca_system_score_codex":0.000015990348,"about_ca_system_score_gemma":0.00009017597,"threshold_uncertainty_score":0.89662164},"labels":[],"label_agreement":null},{"id":"W3203142275","doi":"10.1007/7651_2021_436","title":"Osteogenic Differentiation from Mouse Embryonic Stem Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Embryonic stem cell; Retinoic acid; Cell biology; Stem cell; Lineage (genetic); Cellular differentiation; Biology; Chemistry; Cell culture; Genetics; Gene","score_opus":0.021783120084496954,"score_gpt":0.3519904142365139,"score_spread":0.33020729415201694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203142275","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53282624,0.0030541862,0.46322927,0.000120458535,0.0002650183,0.00016726348,0.000041453088,0.000013648673,0.00028247107],"genre_scores_gemma":[0.27072635,0.0016307866,0.7181322,0.0009989125,0.00027893053,0.00016773927,0.001478783,0.00015073373,0.0064355745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956562,0.0024687408,0.0003550102,0.0008696507,0.00013438746,0.00051602715],"domain_scores_gemma":[0.9987475,0.00009722388,0.00009954467,0.0008290417,0.00011640742,0.00011024255],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000640819,0.0002464514,0.00033649133,0.00011203177,0.000049359856,0.00002916564,0.00038952936,0.00045473955,0.00010604833],"category_scores_gemma":[0.00013919866,0.00025395316,0.00019119322,0.00024949887,0.00009649098,0.0000029850721,0.0005019844,0.00026696504,0.000038790917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042338,0.00008114539,0.0014823681,0.000013484167,0.000092795955,0.00004524366,0.000017450482,0.00007757348,0.9894612,0.00011968448,0.0000682393,0.008498522],"study_design_scores_gemma":[0.00072019437,0.000109409775,0.00033143876,0.000008033762,0.000019174697,0.000009742749,0.000043770746,0.00025369777,0.9907414,0.0005599289,0.0069427793,0.00026046284],"about_ca_topic_score_codex":0.00003746756,"about_ca_topic_score_gemma":0.00006063529,"teacher_disagreement_score":0.2620999,"about_ca_system_score_codex":0.00004953093,"about_ca_system_score_gemma":0.00014618912,"threshold_uncertainty_score":0.9999913},"labels":[],"label_agreement":null},{"id":"W3203237663","doi":"10.1007/978-1-0716-1740-3_17","title":"Generation of Protein Inhibitors for Validation of Cancer Drug Targets Identified in Functional Genomic Screens","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Computational biology; Small molecule; Drug development; Drug; Phage display; Drug discovery; Target protein; Biology; Protein–protein interaction; Gene; Bioinformatics; Biochemistry; Genetics; Pharmacology; Antibody","score_opus":0.09213803014148113,"score_gpt":0.4533983029906909,"score_spread":0.36126027284920975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203237663","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81444466,0.002197249,0.18208201,0.00061537145,0.00013080191,0.000426123,0.000028145778,0.000002386556,0.00007323366],"genre_scores_gemma":[0.39479777,0.00012374447,0.6033728,0.00012480096,0.00015270938,0.0002255817,0.00042303515,0.000016586726,0.00076296943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859357,0.0005316025,0.00039659304,0.00022729437,0.00009720111,0.00015371111],"domain_scores_gemma":[0.99944884,0.000105299434,0.0000949031,0.00011794245,0.00020431777,0.00002868652],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093761715,0.00007872092,0.0002888469,0.00019132528,0.000015009936,0.0000021889175,0.000043803957,0.000096434545,0.00009311488],"category_scores_gemma":[0.0003829389,0.00007157653,0.00009072314,0.00022092971,0.00007808487,0.000014374187,0.000048711652,0.000114717994,5.044983e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022513661,0.00008326706,0.019027924,0.00013501893,0.00004227613,0.0000077497525,0.000055819775,0.00021708709,0.9705621,0.0017237982,0.000030984025,0.007888818],"study_design_scores_gemma":[0.0007665205,0.000079498874,0.010768584,0.000049656384,0.000014314815,0.0000030515628,0.000022602,0.0010335702,0.98418903,0.00238545,0.00062977365,0.000057934918],"about_ca_topic_score_codex":0.00047832422,"about_ca_topic_score_gemma":0.000198111,"teacher_disagreement_score":0.42129079,"about_ca_system_score_codex":0.00004690726,"about_ca_system_score_gemma":0.00019082517,"threshold_uncertainty_score":0.2918806},"labels":[],"label_agreement":null},{"id":"W3203248540","doi":"10.1007/978-1-0716-1740-3_14","title":"Chemical–Genetic Interactions as a Means to Characterize Drug Synergy","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Leverage (statistics); Mechanism (biology); Computational biology; Computer science; Genomics; Genome; Data science; Biology; Genetics; Gene; Artificial intelligence; Epistemology","score_opus":0.02756061491471542,"score_gpt":0.4003648136021292,"score_spread":0.3728041986874138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203248540","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00030155145,0.829444,0.16880472,0.00007147091,0.00049608137,0.00050365645,0.00003674822,0.000021826228,0.00031996658],"genre_scores_gemma":[0.000010917482,0.6985844,0.29820827,0.00044433805,0.00031698565,0.00049053074,0.0010049347,0.00013654193,0.0008031337],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9924789,0.0036971755,0.0011678794,0.0017453402,0.00013949796,0.0007711889],"domain_scores_gemma":[0.9973215,0.00015460391,0.00039692695,0.0016910078,0.00014363271,0.00029236765],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00087131845,0.0008354397,0.0023919563,0.0004948465,0.000057596233,0.000043476106,0.0009392157,0.0008609106,0.00016607376],"category_scores_gemma":[0.0008122805,0.00081987976,0.0013273705,0.0010622705,0.00013600738,0.0000022177926,0.0009351512,0.00056967273,0.0000624455],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009564176,0.000092647715,0.0000063770494,0.0004605456,0.0008006234,0.000084219624,0.00002099375,0.000045412315,0.2486462,0.00016090438,0.00033252567,0.74934],"study_design_scores_gemma":[0.00013405741,0.000059281047,0.0000014274111,0.00089062564,0.00060204574,0.00021841502,0.0000130197,0.000012105219,0.021610526,0.00010486304,0.9755831,0.00077058194],"about_ca_topic_score_codex":0.000051243565,"about_ca_topic_score_gemma":0.000046601173,"teacher_disagreement_score":0.97525054,"about_ca_system_score_codex":0.00013675856,"about_ca_system_score_gemma":0.00043064862,"threshold_uncertainty_score":0.99942523},"labels":[],"label_agreement":null},{"id":"W3203267640","doi":"10.1007/978-1-0716-1740-3_6","title":"Employing Cross-Species Approaches to Construct Humanized Genetic Interaction Networks","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Identification (biology); Prioritization; Computational biology; Construct (python library); Biology; Synthetic lethality; Budding yeast; Computer science; Gene; Genetics; Saccharomyces cerevisiae; Ecology; Engineering; DNA repair","score_opus":0.07378968443284614,"score_gpt":0.3714020935803835,"score_spread":0.2976124091475374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203267640","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12956932,0.0014825091,0.8661741,0.000099104334,0.00056650315,0.00020412404,0.000006140535,0.000014365225,0.0018838564],"genre_scores_gemma":[0.23447794,0.00011134517,0.76362926,0.0010320105,0.00022662914,0.00005564402,0.00015229812,0.00003637963,0.0002784846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99778986,0.0006052967,0.0005232566,0.0005584442,0.0000596439,0.00046348135],"domain_scores_gemma":[0.9990922,0.000058359787,0.000121480916,0.00054689916,0.00007747541,0.000103574144],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00065181847,0.00024893633,0.00033847996,0.000098149736,0.00008821838,0.00007490945,0.00027270307,0.00038605745,0.000055049444],"category_scores_gemma":[0.00022769776,0.00025635687,0.00014726575,0.00024800163,0.00015782738,0.000003887964,0.00041305984,0.00026507056,0.000006514262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100324854,0.000054175303,0.008771849,0.000023023409,0.00012751229,0.000031404576,0.00012117625,0.013545881,0.9067013,0.0066683455,0.00012420832,0.06373079],"study_design_scores_gemma":[0.0034055342,0.0008058028,0.013895253,0.00009868669,0.0000927318,0.0006286003,0.0007386483,0.026061207,0.8347803,0.017425619,0.099972636,0.0020950134],"about_ca_topic_score_codex":0.00000879635,"about_ca_topic_score_gemma":0.000039674378,"teacher_disagreement_score":0.10490862,"about_ca_system_score_codex":0.000035177705,"about_ca_system_score_gemma":0.00006945679,"threshold_uncertainty_score":0.99998885},"labels":[],"label_agreement":null},{"id":"W3203490800","doi":"10.1007/978-1-0716-1740-3_11","title":"INCISOR: An Algorithm to Identify Synthetic Rescue Mediators of Resistance to Targeted and Immunotherapy","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"","keywords":"Immunotherapy; Gene; Genome; Cancer; Medicine; Computational biology; Cancer research; Bioinformatics; Biology; Genetics; Internal medicine","score_opus":0.010108652214344347,"score_gpt":0.36874989532236735,"score_spread":0.358641243108023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203490800","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45189595,0.0054398994,0.54187465,0.00024113376,0.00022485276,0.00018097047,0.00006505532,0.0000048146735,0.000072666124],"genre_scores_gemma":[0.07914093,0.00079869165,0.91830504,0.0014506349,0.00006566242,0.000057789297,0.0000782932,0.000038663715,0.000064279906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980255,0.00065702153,0.0003645376,0.00059580326,0.00007015118,0.0002869908],"domain_scores_gemma":[0.9989536,0.000084250874,0.000060973733,0.0006222248,0.00013634792,0.00014259366],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077866024,0.00017499541,0.00032776393,0.00013146269,0.00003092962,0.0000149266925,0.00023899686,0.00022035764,0.000015102306],"category_scores_gemma":[0.0009897011,0.00019020267,0.00006671821,0.00029068286,0.00009115646,0.0000020007749,0.00024662126,0.00009674884,0.000001380509],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084599895,0.00005034989,0.0005228497,0.000010625506,0.00003516113,0.000017507866,0.00013230131,0.00007008812,0.963297,0.0003782275,0.000050980318,0.03535031],"study_design_scores_gemma":[0.0004394615,0.00031062003,0.002067332,0.00001788592,0.000011033702,0.000009276861,0.00010257027,0.00003195186,0.9743958,0.0018503605,0.02052771,0.00023598172],"about_ca_topic_score_codex":0.00006196984,"about_ca_topic_score_gemma":0.0003043935,"teacher_disagreement_score":0.3764304,"about_ca_system_score_codex":0.000025222753,"about_ca_system_score_gemma":0.00012307645,"threshold_uncertainty_score":0.775624},"labels":[],"label_agreement":null},{"id":"W3203517521","doi":"10.1007/978-1-0716-1740-3_9","title":"Mapping Genetic Interactions in Human Cancer Cells Using a One-Step tRNA-CRISPR System","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"CRISPR; Computational biology; Barcode; Pairwise comparison; Biology; Scalability; Genetic code; Genetic screen; Computer science; Genetics; Gene; Database; Artificial intelligence; Phenotype","score_opus":0.03504517912892666,"score_gpt":0.4543813950073448,"score_spread":0.4193362158784182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203517521","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35393634,0.0030213331,0.64224875,0.000026309355,0.0003787238,0.00013204827,0.000007176638,0.000010889606,0.00023845976],"genre_scores_gemma":[0.43002203,0.00012335283,0.56941295,0.000119108256,0.00011959216,0.00006413653,0.000026483081,0.00003809512,0.00007427031],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976962,0.00072387065,0.00047989335,0.00060642604,0.00006214337,0.00043146693],"domain_scores_gemma":[0.9992892,0.000032938216,0.00008423791,0.0004547974,0.00006877315,0.00007003564],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00042031548,0.0002265288,0.0003537768,0.00021690056,0.000051195388,0.00001878971,0.0002001571,0.00020721667,0.000028245511],"category_scores_gemma":[0.000081292426,0.0002671263,0.00012612822,0.00036247633,0.00005429394,0.0000023539596,0.00020774767,0.0002520409,0.0000014745889],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007636071,0.0000474077,0.002366468,0.00007400257,0.00005319951,0.00006517107,0.00007394481,0.008575351,0.9848066,0.00011112302,0.000007226938,0.0038118642],"study_design_scores_gemma":[0.0005020392,0.00003692625,0.0011310906,0.000120580815,0.00002026787,0.00005967793,0.0003346486,0.005149236,0.9891715,0.00007184714,0.0031044644,0.00029772037],"about_ca_topic_score_codex":0.00037688698,"about_ca_topic_score_gemma":0.00043785467,"teacher_disagreement_score":0.07608571,"about_ca_system_score_codex":0.000106736006,"about_ca_system_score_gemma":0.00009372994,"threshold_uncertainty_score":0.99997807},"labels":[],"label_agreement":null},{"id":"W3203808558","doi":"10.1007/978-1-0716-1740-3_15","title":"Puromycin Labeling Coupled with Proximity Ligation Assays to Define Sites of mRNA Translation in Drosophila Embryos and Human Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Puromycin; Biology; Proximity ligation assay; Messenger RNA; Molecular biology; Translation (biology); Cell biology; Protein biosynthesis; Gene expression; Gene; Computational biology; Ribosome profiling; Genetics","score_opus":0.024203790876239112,"score_gpt":0.3322425536311321,"score_spread":0.30803876275489295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3203808558","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.664894,0.0006754132,0.33390516,0.00013080034,0.00002298353,0.00026889105,0.0000050105896,0.000004075338,0.00009364633],"genre_scores_gemma":[0.49487796,0.000040005525,0.5048627,0.000098123965,0.000013099974,0.00003928755,0.000043283904,0.000012890904,0.000012594132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813265,0.0008119712,0.00033032414,0.00044784215,0.00007269121,0.00020450531],"domain_scores_gemma":[0.99943995,0.00006656797,0.00009705977,0.00026339194,0.00008575881,0.00004729584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011009726,0.00015824924,0.00029564803,0.00011140053,0.000029873316,0.0000097093225,0.00009969418,0.00026185683,0.000007822369],"category_scores_gemma":[0.00022357125,0.00015157246,0.000041183237,0.00024495728,0.00005580141,0.000003860807,0.00006131753,0.000109133776,3.8855035e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007115592,0.000057971145,0.0024432216,0.00003843882,0.000020205482,0.00001232884,0.00007041706,0.000244146,0.9918543,0.00089373725,5.076699e-7,0.0042935773],"study_design_scores_gemma":[0.00061588665,0.00037948898,0.00066252775,0.00004233581,0.000015285925,0.0000095065525,0.000032269214,0.00020812114,0.9944843,0.003285425,0.00009365528,0.00017118029],"about_ca_topic_score_codex":0.000043718035,"about_ca_topic_score_gemma":0.00015751713,"teacher_disagreement_score":0.17095758,"about_ca_system_score_codex":0.000010669048,"about_ca_system_score_gemma":0.000048873542,"threshold_uncertainty_score":0.61809456},"labels":[],"label_agreement":null},{"id":"W3204226049","doi":"10.1007/978-1-0716-1740-3_4","title":"A Genetic Interaction Screening Approach in C. elegans","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Multicellular organism; Epistasis; Caenorhabditis elegans; Model organism; Biology; Genetic screen; Genetics; Allele; Genome; Organism; Gene; Function (biology); Computational biology; Phenotype","score_opus":0.026022641371286265,"score_gpt":0.3612494144778749,"score_spread":0.33522677310658866,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204226049","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2894365,0.001618975,0.7077414,0.0000846353,0.00019212488,0.00013137083,0.0000029800708,0.000009769788,0.0007822558],"genre_scores_gemma":[0.30174637,0.00016688973,0.697213,0.0005391742,0.0000813445,0.000037860988,0.00008481347,0.00003297104,0.00009760237],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969027,0.0013713677,0.00042624216,0.00076386705,0.00007844685,0.0004573578],"domain_scores_gemma":[0.99916846,0.00003736891,0.000088491404,0.00055930647,0.00007449717,0.00007186033],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007417913,0.00024140811,0.000324251,0.00017240505,0.000036536178,0.000025179188,0.0002686271,0.00038081143,0.000026704814],"category_scores_gemma":[0.00032025162,0.00026997153,0.00012221941,0.00030545186,0.00010102625,0.0000032877713,0.0002514004,0.00032135838,0.0000036114293],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026909629,0.00012257749,0.017736642,0.000019469957,0.00003387916,0.000050065228,0.00018564831,0.0040164604,0.96398014,0.0002335656,0.00001914094,0.013575532],"study_design_scores_gemma":[0.0011767886,0.00021185544,0.011778448,0.000023861754,0.000027591042,0.00021557209,0.00040529412,0.005421242,0.96969765,0.0022519357,0.008226253,0.0005635185],"about_ca_topic_score_codex":0.00008769145,"about_ca_topic_score_gemma":0.0001130567,"teacher_disagreement_score":0.0130120125,"about_ca_system_score_codex":0.000030804127,"about_ca_system_score_gemma":0.000087940905,"threshold_uncertainty_score":0.99997526},"labels":[],"label_agreement":null},{"id":"W3204316775","doi":"10.1007/978-1-0716-1740-3_10","title":"In Vivo Genome-Wide Pooled RNAi Screens in Cancer Cells to Identify Determinants of Chemotherapy/Drug Response","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"RNA interference; Biology; In vivo; Gene; Computational biology; Genome; Function (biology); Cancer; Genetic screen; Drug discovery; Bioinformatics; Genetics; Phenotype; RNA","score_opus":0.019687319912333228,"score_gpt":0.40276931563259055,"score_spread":0.3830819957202573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204316775","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96934664,0.0016545723,0.028043723,0.0003776132,0.00022052822,0.00024033517,0.000038996357,0.0000032117955,0.00007439017],"genre_scores_gemma":[0.8704137,0.0009581578,0.12339724,0.0042323787,0.000053650736,0.00011839918,0.000019536154,0.000049476566,0.00075741566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964197,0.0018116309,0.0005918242,0.0006618068,0.00007563193,0.0004394051],"domain_scores_gemma":[0.99905974,0.000108097825,0.000117847885,0.0005397014,0.00010289341,0.00007173859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015096371,0.00022934384,0.0004858579,0.00031102734,0.00001409952,0.000009608771,0.00037726754,0.00029248645,0.000115414965],"category_scores_gemma":[0.0004918347,0.00024394588,0.00012493199,0.0004578304,0.00008681427,0.000004542503,0.00025717367,0.00017674103,0.000004238488],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069811847,0.0001050153,0.02768464,0.000018473222,0.000029179035,0.0001581887,0.00018714734,0.00025579703,0.9684962,0.0000041658736,0.00009154278,0.0022715214],"study_design_scores_gemma":[0.00082395563,0.00019154731,0.023890538,0.000053492535,0.000008109938,0.000008513698,0.00011491451,0.00003743959,0.9712268,0.00023269975,0.0031642208,0.0002477424],"about_ca_topic_score_codex":0.00046891396,"about_ca_topic_score_gemma":0.0019541727,"teacher_disagreement_score":0.098932885,"about_ca_system_score_codex":0.000053624553,"about_ca_system_score_gemma":0.00019639466,"threshold_uncertainty_score":0.9947824},"labels":[],"label_agreement":null},{"id":"W3204436363","doi":"10.1007/978-1-0716-1708-3_15","title":"Rabbit Surgery Protocol for End-to-End and End-to-Side Vascular Graft Anastomosis","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrospun Nanofibers in Biomedical Applications","field":"Materials Science","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Heart, Lung, and Blood Institute","keywords":"Anastomosis; Animal model; Medicine; Surgery; Carotid arteries; Experimental animal; Vascular graft; Internal medicine","score_opus":0.030485753817845445,"score_gpt":0.40608240059787293,"score_spread":0.37559664678002747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204436363","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00812507,0.00010052711,0.96301156,0.0021011874,0.00016464184,0.026248107,0.00004833716,0.00006703448,0.00013352915],"genre_scores_gemma":[0.00033983687,0.000006316509,0.8353313,0.0020796426,0.000060042814,0.16206214,0.000032424803,0.000034527213,0.00005376579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959041,0.0014790619,0.00062043616,0.0010568735,0.00019404927,0.00074546854],"domain_scores_gemma":[0.9972659,0.001449182,0.00011855138,0.00072508893,0.00015776292,0.00028353627],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0038016236,0.00027358867,0.0006371871,0.00030710336,0.00012778552,0.000051189985,0.00038102508,0.0002881883,0.00027424752],"category_scores_gemma":[0.0014362253,0.00025687617,0.00017144356,0.0010514084,0.0002759184,0.00003420548,0.00036811302,0.00016512076,0.00002563214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037115897,0.00008297789,0.00026965392,0.000057441568,0.000023698158,0.000017359758,0.0000478508,0.0000041957887,0.9597158,0.0031306476,0.00026528008,0.03634798],"study_design_scores_gemma":[0.00039587967,0.00012266215,0.0003502034,0.000028021212,0.000022255075,0.000021622755,0.000010775179,0.00002856341,0.89230627,0.013506023,0.09293704,0.00027068035],"about_ca_topic_score_codex":0.00006278097,"about_ca_topic_score_gemma":0.00003776426,"teacher_disagreement_score":0.13581403,"about_ca_system_score_codex":0.00009381726,"about_ca_system_score_gemma":0.00022246475,"threshold_uncertainty_score":0.9999883},"labels":[],"label_agreement":null},{"id":"W3204515758","doi":"10.1007/978-1-0716-1708-3_16","title":"Vascular Imaging in Small Animals Using Clinical Ultrasound Scanners","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research Institute for Aging; University of Waterloo","funders":"National Heart, Lung, and Blood Institute","keywords":"Sonographer; Ultrasound; Medicine; Ultrasound imaging; Radiology; High frequency ultrasound; Medical physics; Blood flow; Biomedical engineering","score_opus":0.04244411134855856,"score_gpt":0.4048589092939412,"score_spread":0.3624147979453826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204515758","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37843063,0.002824886,0.617678,0.000032732845,0.00015198835,0.00008524935,0.0000030704016,0.00004858104,0.0007448456],"genre_scores_gemma":[0.15248801,0.00028956853,0.84687036,0.0002188544,0.000048765727,0.000025489295,0.00001437959,0.000039325485,0.000005258968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797153,0.0008144139,0.00046228783,0.00036456858,0.000034461293,0.0003527362],"domain_scores_gemma":[0.9990534,0.0004691422,0.000030227664,0.00035353063,0.00003349422,0.000060167004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011945592,0.00015742448,0.0003460096,0.00013813525,0.000026261465,0.000020677426,0.00017446122,0.00017552936,0.000041298732],"category_scores_gemma":[0.00045951,0.00017684422,0.00013238598,0.00045479677,0.00009621301,0.000020106116,0.000042448162,0.00032472372,0.000005370554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000015417287,0.000031588264,0.046295177,0.000010813889,0.000027768789,0.000043895296,0.000056758585,0.0041498877,0.9357091,0.0014715582,0.0000023754124,0.012199539],"study_design_scores_gemma":[0.004907577,0.000095671094,0.095229045,0.00026287264,0.0002752802,0.0006861874,0.0013807084,0.11321562,0.63646954,0.09351904,0.05087244,0.003085991],"about_ca_topic_score_codex":0.000056797006,"about_ca_topic_score_gemma":0.00008162758,"teacher_disagreement_score":0.29923955,"about_ca_system_score_codex":0.00006732693,"about_ca_system_score_gemma":0.00005076087,"threshold_uncertainty_score":0.72114974},"labels":[],"label_agreement":null},{"id":"W3204525114","doi":"10.1007/978-1-0716-1685-7_6","title":"Cell Free Remodeling of Glycosylation of Antibodies","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Biomanufacturing; Glycosylation; Glycan; Monoclonal antibody; Antibody; Chemistry; Biochemistry; Glycoprotein; Computational biology; Biology; Immunology","score_opus":0.02569964397469444,"score_gpt":0.40304727510953114,"score_spread":0.3773476311348367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204525114","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41889146,0.0025119288,0.5762968,0.00005769788,0.000056862093,0.00009652746,0.000012671675,0.0000028924521,0.002073173],"genre_scores_gemma":[0.42043698,0.0002412735,0.57904565,0.000039560073,0.000017131668,0.0000065734166,0.000075916265,0.00001241898,0.00012448711],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981615,0.0008052735,0.00040677795,0.00032346253,0.00009915,0.00020383866],"domain_scores_gemma":[0.99893373,0.00005274809,0.00013193255,0.0005660093,0.000280818,0.000034742046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008416228,0.00011301531,0.00026251056,0.00013260852,0.000018371446,0.0000035634068,0.00022607435,0.00023095882,0.00003959959],"category_scores_gemma":[0.001095729,0.00011522615,0.00011317619,0.00026201044,0.00011845508,0.000002103429,0.00026688745,0.000112461785,8.831451e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054965512,0.00006666225,0.0038417168,0.000054475866,0.000017685286,0.000004872024,0.000025344127,0.00047325087,0.98871607,0.0007610973,0.00001852891,0.005965354],"study_design_scores_gemma":[0.0005875016,0.00014114831,0.0007088989,0.000015074868,0.0000065363806,0.0000059078875,0.00003947569,0.0007698229,0.9922936,0.0034472093,0.0018812912,0.000103544226],"about_ca_topic_score_codex":0.00005000809,"about_ca_topic_score_gemma":0.000023788765,"teacher_disagreement_score":0.00586181,"about_ca_system_score_codex":0.000008461581,"about_ca_system_score_gemma":0.00012035574,"threshold_uncertainty_score":0.4698786},"labels":[],"label_agreement":null},{"id":"W320478385","doi":"10.1007/978-1-59745-280-9_11","title":"Cancer Stem Cells in Head and Neck Squamous Cell Carcinoma","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; Ontario Institute for Cancer Research","funders":"","keywords":"Head and neck; Basal cell; Oncology; Medicine; Head and neck cancer; Head and neck squamous-cell carcinoma; Stem cell; Internal medicine; Cancer; Biology; Surgery; Genetics","score_opus":0.030220652100169238,"score_gpt":0.3849915390897113,"score_spread":0.35477088698954207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W320478385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94654745,0.0154044535,0.03489364,0.0007138255,0.00022884946,0.00036771724,0.00000955231,0.000014561312,0.0018199317],"genre_scores_gemma":[0.73084545,0.00034506386,0.26666868,0.0018169845,0.000040207604,0.00002591467,0.000003474591,0.000015360756,0.00023885604],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99846584,0.0004377564,0.0002876228,0.0004019337,0.000056350178,0.00035050072],"domain_scores_gemma":[0.9994931,0.000068803914,0.00005559198,0.00025818622,0.000023831804,0.00010046085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00051123207,0.00016677081,0.00046984805,0.00020206311,0.000014544981,0.000005326214,0.000073429765,0.00017107105,0.000045413606],"category_scores_gemma":[0.000019901792,0.0001483801,0.00006594858,0.00027294757,0.00007587184,0.000012121573,0.00003753906,0.00025529403,0.0000019723414],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012232973,0.000104356724,0.018778306,0.00005099637,0.000004190981,0.00017669181,0.00016385801,0.000020625663,0.8277005,0.00015245038,0.000034857574,0.15269084],"study_design_scores_gemma":[0.0035702626,0.0007698257,0.021259258,0.000033611443,0.000051797695,0.000029788704,0.00007449135,0.00013739296,0.9603164,0.00079744734,0.012735898,0.0002238142],"about_ca_topic_score_codex":0.0008151278,"about_ca_topic_score_gemma":0.00014708786,"teacher_disagreement_score":0.23177503,"about_ca_system_score_codex":0.000094196876,"about_ca_system_score_gemma":0.00008113064,"threshold_uncertainty_score":0.6050765},"labels":[],"label_agreement":null},{"id":"W3204785510","doi":"10.1007/978-1-0716-1740-3_2","title":"Mapping Synthetic Dosage Lethal Genetic Interactions in Saccharomyces cerevisiae","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Synthetic lethality; Saccharomyces cerevisiae; Mutant; Biology; Gene; Genetic screen; Genetics; Missense mutation; Mutation; Yeast; Computational biology","score_opus":0.033781876449644574,"score_gpt":0.4114211543568397,"score_spread":0.3776392779071951,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204785510","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6402619,0.006651432,0.34921467,0.00050718314,0.00034011382,0.00022978493,0.000014732114,0.000011136192,0.002769061],"genre_scores_gemma":[0.5342085,0.0005793534,0.46413496,0.00029501182,0.00010984906,0.00009225276,0.000072306975,0.00003864843,0.00046913986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99638283,0.0018015371,0.00043528902,0.00074739277,0.000098833785,0.0005341125],"domain_scores_gemma":[0.99907416,0.00011018255,0.00006584018,0.0005681281,0.00008674231,0.00009493622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074556575,0.00022630946,0.00032199305,0.00025549912,0.00004495975,0.000028382938,0.00033467452,0.00021393494,0.00016943901],"category_scores_gemma":[0.0006848783,0.00023283444,0.00014265995,0.00049935904,0.00013862782,0.0000027539484,0.00042664522,0.00037465707,0.000019127792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023349738,0.00009260402,0.0083019035,0.000029955301,0.00003375166,0.0001834037,0.00006158283,0.00019079607,0.9663227,0.00016625429,0.00002086751,0.024572838],"study_design_scores_gemma":[0.0005481358,0.00010721171,0.0067227976,0.000056804955,0.0000069624425,0.00019922595,0.00020039048,0.00040581042,0.970902,0.0017729345,0.018754175,0.00032349705],"about_ca_topic_score_codex":0.00006856503,"about_ca_topic_score_gemma":0.00015657446,"teacher_disagreement_score":0.11492029,"about_ca_system_score_codex":0.000038949438,"about_ca_system_score_gemma":0.00014462508,"threshold_uncertainty_score":0.9494713},"labels":[],"label_agreement":null},{"id":"W3204812983","doi":"10.1007/978-1-0716-1689-5_22","title":"Development and Characterization of Light-Responsive Peptide Macrocycles","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photochromic and Fluorescence Chemistry","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Azobenzene; Peptide; Moiety; Molecule; Amino acid; Chemistry; Stereochemistry; Combinatorial chemistry; Conjugate; Biochemistry; Organic chemistry","score_opus":0.0169257512410954,"score_gpt":0.33863556883100127,"score_spread":0.32170981758990586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3204812983","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8273587,0.00011383309,0.17222305,0.000050856605,0.00005564538,0.00004613991,0.000004620257,0.0000066095463,0.00014050881],"genre_scores_gemma":[0.09295865,0.000022238395,0.9067852,0.00012456925,0.000009266652,0.000018109968,0.000021037808,0.000006292141,0.000054656062],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999085,0.00029739365,0.00021766419,0.00022922359,0.00003673053,0.0001339848],"domain_scores_gemma":[0.9996698,0.000054089538,0.00007281512,0.00013117252,0.000043910513,0.000028197095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004338825,0.000075367396,0.0001816316,0.000034383385,0.000019988984,0.000006674513,0.00008591317,0.00009083938,0.00006655937],"category_scores_gemma":[0.00020467835,0.000071277456,0.00001694698,0.00008482153,0.00008236906,0.000017777375,0.00011299362,0.000051559764,0.0000024988606],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016853464,0.000016691813,0.00032875728,0.000022664353,0.0000036420877,0.000024919607,0.00029863085,2.0294398e-7,0.99569637,0.00036720838,7.16764e-7,0.0032233577],"study_design_scores_gemma":[0.00013404326,0.000007047927,0.0016444299,0.000023819666,0.000002968803,0.000018741961,0.000072123796,0.000010000331,0.99641365,0.0005876176,0.0010086098,0.00007696965],"about_ca_topic_score_codex":0.0000027705537,"about_ca_topic_score_gemma":0.00000137543,"teacher_disagreement_score":0.73456216,"about_ca_system_score_codex":0.000018710112,"about_ca_system_score_gemma":0.000084582614,"threshold_uncertainty_score":0.29066104},"labels":[],"label_agreement":null},{"id":"W3209745549","doi":"10.1007/978-1-0716-1851-6_14","title":"Single-Molecule RNA Imaging Using Mango II Arrays","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"Wellcome Trust","keywords":"RNA; Aptamer; Fluorescence; Folding (DSP implementation); Chemistry; Biophysics; Computational biology; Cell biology; Biology; Biochemistry; Molecular biology; Gene; Physics","score_opus":0.02405717488286655,"score_gpt":0.3878369074326684,"score_spread":0.36377973254980184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3209745549","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13936155,0.0018002901,0.8569101,0.00023184644,0.00014273824,0.000099977464,0.0000083353825,0.000043776232,0.0014013879],"genre_scores_gemma":[0.17121129,0.00008803123,0.8271804,0.0011072933,0.00010155641,0.000008535733,0.00011667214,0.000042187767,0.00014405143],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971637,0.0009492149,0.00042379933,0.0008513078,0.000092106275,0.0005198509],"domain_scores_gemma":[0.99886715,0.000030055658,0.0001480447,0.00070494186,0.0001648128,0.00008496135],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006699061,0.00030322434,0.00038896844,0.00016434859,0.00012573074,0.00002424458,0.00024812922,0.00029566378,0.000008014769],"category_scores_gemma":[0.000519435,0.00030591138,0.00024040467,0.0004480179,0.00021601318,0.0000042382535,0.00046021809,0.00022203854,7.4854364e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019471934,0.00010273706,0.00046377035,0.0000073125707,0.000052412972,0.00011084952,0.000013274219,0.000036371046,0.9838217,0.0002948985,0.000032200056,0.015045034],"study_design_scores_gemma":[0.00029609742,0.000109749155,0.00001928772,0.0000232679,0.000039981765,0.00015221052,0.00006330213,0.0005977322,0.98809344,0.0021193095,0.008111499,0.000374139],"about_ca_topic_score_codex":0.000019672152,"about_ca_topic_score_gemma":0.000018338622,"teacher_disagreement_score":0.03184975,"about_ca_system_score_codex":0.000053653177,"about_ca_system_score_gemma":0.00008713714,"threshold_uncertainty_score":0.9999393},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"agree"},{"id":"W3210034971","doi":"10.1007/978-1-0716-1720-5_1","title":"A Method to Map Gene Essentiality of Human Pluripotent Stem Cells by Genome-Scale CRISPR Screens with Inducible Cas9","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Cancer Institute; Canadian Institutes of Health Research","keywords":"CRISPR; Induced pluripotent stem cell; Biology; Computational biology; Gene; Human Induced Pluripotent Stem Cells; Cas9; Genome editing; Genetics; Genome; Scale (ratio); Embryonic stem cell; Geography; Cartography","score_opus":0.01482567224147151,"score_gpt":0.40220267410295935,"score_spread":0.3873770018614878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210034971","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20016721,0.0019417473,0.797272,0.000093366645,0.00008983351,0.00023748686,0.000065418695,0.000009946758,0.00012296415],"genre_scores_gemma":[0.06281838,0.000046882164,0.9361587,0.00030546213,0.000055656186,0.000038140086,0.00015685473,0.000050731454,0.00036918046],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99711454,0.0009947602,0.0004725422,0.00083845516,0.00011638364,0.00046329448],"domain_scores_gemma":[0.99877584,0.00003333967,0.00010284214,0.0007727813,0.00016061259,0.00015455563],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010989802,0.00028616044,0.0004962142,0.00011527133,0.000046213197,0.000012866465,0.00029704394,0.00031315562,0.00003228917],"category_scores_gemma":[0.000023946002,0.00028207662,0.00013777202,0.0002683814,0.00008649129,0.0000019574143,0.0003333627,0.00019042386,0.0000016950701],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039645478,0.00010076908,0.0004651614,0.000052136886,0.000107859,0.000028044828,0.00008855235,0.0019452883,0.9944518,0.000054968412,0.00007132843,0.0025944277],"study_design_scores_gemma":[0.00052512536,0.0004133674,0.00023952333,0.000014266768,0.00004614506,0.000035177305,0.00013274298,0.000046779296,0.98653823,0.00009986071,0.011584156,0.00032462427],"about_ca_topic_score_codex":0.00015087318,"about_ca_topic_score_gemma":0.00010667903,"teacher_disagreement_score":0.13888668,"about_ca_system_score_codex":0.000026976546,"about_ca_system_score_gemma":0.000082694336,"threshold_uncertainty_score":0.99996316},"labels":[],"label_agreement":null},{"id":"W3210241331","doi":"10.1007/978-1-0716-1720-5_4","title":"Design and Generation of a CRISPR Interference System for Genetic Repression and Essential Gene Analysis in the Fungal Pathogen Candida albicans","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Candida albicans; CRISPR; Biology; CRISPR interference; Gene; Cas9; Psychological repression; Computational biology; Genetics; Plasmid; Genome editing; RNA interference; RNA; Gene expression","score_opus":0.0447028395463388,"score_gpt":0.40017309287512076,"score_spread":0.35547025332878196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3210241331","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.451952,0.0016720985,0.5461051,0.000047437137,0.000018769835,0.0001921537,0.000005041272,0.0000017015893,0.0000057217726],"genre_scores_gemma":[0.5973541,0.0000865167,0.40244734,0.000046490863,0.000011146916,0.00003052573,0.00001604729,0.000003238684,0.0000045592355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729824,0.0018537507,0.00030882092,0.00035419367,0.000054408814,0.00013056707],"domain_scores_gemma":[0.9992575,0.00028136082,0.00007144507,0.0002753301,0.00008637793,0.00002798797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014884409,0.000087729255,0.00036831776,0.00011032838,0.000026620113,0.0000074472046,0.000052697626,0.00011363324,0.000004541029],"category_scores_gemma":[0.0004801725,0.00006203169,0.0000605114,0.0002951376,0.0000902018,0.000008921148,0.00003848371,0.000088582165,2.7553332e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014466028,0.000030018524,0.06786202,0.00008275434,0.00006935334,0.000054106524,0.00031995933,0.00009135863,0.92573375,0.00012303964,0.0000011591092,0.005487807],"study_design_scores_gemma":[0.0008893322,0.000291705,0.083391,0.000060713097,0.00054147973,0.000059389367,0.00078979257,0.032935675,0.8805245,0.00039784145,0.000009261549,0.00010929763],"about_ca_topic_score_codex":0.00008306,"about_ca_topic_score_gemma":0.00017089951,"teacher_disagreement_score":0.14540212,"about_ca_system_score_codex":0.000023338718,"about_ca_system_score_gemma":0.00006791179,"threshold_uncertainty_score":0.2529579},"labels":[],"label_agreement":null},{"id":"W3212243661","doi":"10.1007/978-1-0716-1822-6_12","title":"Macrolipidomic Profiling of Vegetable Oils: The Analysis of Sunflower Oils with Different Oleic Acid Content","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Lipidomics; Oleic acid; Sunflower; Chemistry; Fatty acid; Sunflower oil; Chromatography; Sunflower seed; Tandem mass spectrometry; Mass spectrometry; Food science; Biology; Biochemistry; Horticulture","score_opus":0.023872880246863775,"score_gpt":0.3423070726864295,"score_spread":0.3184341924395657,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212243661","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66758585,0.007698926,0.32413906,0.000091382855,0.000107371074,0.00013188976,0.000024944464,0.0000026686969,0.00021790287],"genre_scores_gemma":[0.737079,0.0008843186,0.26161277,0.00016905722,0.00002895965,0.000053221327,0.00009036611,0.000019664332,0.00006264974],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976282,0.0009260216,0.00051779253,0.0004917368,0.00010200048,0.0003342526],"domain_scores_gemma":[0.998697,0.00009557935,0.00026256626,0.00069028017,0.00021314566,0.000041471307],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008717456,0.00022792236,0.0008242781,0.00020149261,0.00003926464,0.0000072174985,0.0002786686,0.00016580209,0.000025249607],"category_scores_gemma":[0.0004374203,0.00014598148,0.0003048084,0.0006974141,0.0002698338,0.0000016621349,0.00027332848,0.00015505706,1.9212341e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012400861,0.00011333175,0.019503398,0.000031440984,0.0018944222,0.0000063973666,0.000035145695,0.00012483035,0.97447306,0.0024869903,0.000002222818,0.0012047555],"study_design_scores_gemma":[0.0006504024,0.000203216,0.00441771,0.000010890908,0.00057224056,0.000006364051,0.00013042675,0.00011524717,0.9930517,0.00036429794,0.00031697983,0.00016049374],"about_ca_topic_score_codex":0.00003546322,"about_ca_topic_score_gemma":0.00011263928,"teacher_disagreement_score":0.069493145,"about_ca_system_score_codex":0.000015008087,"about_ca_system_score_gemma":0.00007115268,"threshold_uncertainty_score":0.5952952},"labels":[],"label_agreement":null},{"id":"W3212675731","doi":"10.1007/978-1-0716-1799-1_13","title":"qPrimerDB: A Powerful and User-Friendly Database for qPCR Primer Design","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ministry of Education and Child Care","funders":"","keywords":"Primer (cosmetics); Database; Computer science; Computational biology; Data mining; Biology; Chemistry","score_opus":0.027519960370681117,"score_gpt":0.40982679369054975,"score_spread":0.38230683331986864,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212675731","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009392289,0.0038066623,0.9851622,0.00044394753,0.00009279736,0.00065561355,0.000064596206,0.000026848307,0.00035501845],"genre_scores_gemma":[0.004497925,0.00040378072,0.99251,0.0012812143,0.000053471762,0.00035428605,0.0005532143,0.000046332872,0.00029975406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972783,0.0009391253,0.0003608003,0.00093414227,0.000048384547,0.0004392667],"domain_scores_gemma":[0.9987346,0.000117755684,0.000104292965,0.00080139306,0.00013779096,0.000104159015],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011023157,0.0002681689,0.00033103809,0.00009083478,0.000074669486,0.000018193572,0.00027329026,0.00044376357,0.000021312306],"category_scores_gemma":[0.0006749852,0.00027037514,0.00012825827,0.00020570324,0.00022964427,0.0000031310626,0.00036915674,0.00017290791,0.000002297472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000063011714,0.00008227673,0.00042145228,0.000015535174,0.00005916474,0.000013788468,0.000006536739,0.000007964233,0.9820676,0.0108362315,0.00089217577,0.0055342806],"study_design_scores_gemma":[0.0005697626,0.00037569087,0.00006240489,0.000009184161,0.000031340205,0.000071994116,0.000017598113,0.000081210375,0.82733905,0.0027043147,0.16845512,0.00028229438],"about_ca_topic_score_codex":0.000015967933,"about_ca_topic_score_gemma":0.000009398896,"teacher_disagreement_score":0.16756295,"about_ca_system_score_codex":0.000014265894,"about_ca_system_score_gemma":0.00014486992,"threshold_uncertainty_score":0.99997485},"labels":[],"label_agreement":null},{"id":"W3212821685","doi":"10.1007/978-1-0716-1900-1_8","title":"Design and Production of Hybrid Antigens for Targeting Integral Outer Membrane Proteins in Gram-Negative Bacteria","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Calgary","funders":"","keywords":"Bacteria; Bacterial outer membrane; Gram-negative bacteria; Antigen; Microbiology; Chemistry; Biology; Biochemistry; Escherichia coli; Gene; Genetics","score_opus":0.020048366377261713,"score_gpt":0.3298859259495902,"score_spread":0.3098375595723285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3212821685","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5366891,0.0003935021,0.46195796,0.00025828322,0.00022882975,0.0004516006,0.00000949169,0.0000044963285,0.0000067051897],"genre_scores_gemma":[0.22219796,0.0002735522,0.777173,0.00006829425,0.00004968594,0.00009596335,0.0000907845,0.000019841716,0.000030917516],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99778336,0.00087554316,0.00040225204,0.0005992042,0.000032876735,0.00030676354],"domain_scores_gemma":[0.99938303,0.000048148675,0.00013344285,0.00027321698,0.00013089707,0.000031278916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010660288,0.00018737049,0.00035960056,0.00012246534,0.000025273048,0.000009317222,0.00013411453,0.000290266,0.0000054706557],"category_scores_gemma":[0.0011065033,0.00017804837,0.00006750543,0.00016983622,0.00020549816,0.0000027224748,0.00017035606,0.00014760652,1.6357487e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018021271,0.000069021895,0.00033916914,0.00004316194,0.000037956248,0.000010831427,0.000042889846,0.00004102902,0.98937154,0.00018169444,0.00000732978,0.009675182],"study_design_scores_gemma":[0.000609119,0.00044743548,0.0002375927,0.000022704295,0.00001179748,0.000039787923,0.000051137737,0.0001658229,0.9935486,0.0034746097,0.0012030995,0.00018831457],"about_ca_topic_score_codex":0.000021021726,"about_ca_topic_score_gemma":0.000021699308,"teacher_disagreement_score":0.31521502,"about_ca_system_score_codex":0.00001322505,"about_ca_system_score_gemma":0.00008138006,"threshold_uncertainty_score":0.72606015},"labels":[],"label_agreement":null},{"id":"W3214404858","doi":"10.1007/978-1-0716-1771-7_9","title":"Customizing Maxpar Direct Immune Profiling Assay with Additional Surface Marker and Intracellular Cytokine Staining Workflows for Expanded Mass Cytometry Panels","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fluidigm (Canada)","funders":"","keywords":"Mass cytometry; Flow cytometry; Cytometry; Peripheral blood mononuclear cell; Antibody; Immune system; Molecular biology; Biology; Staining; Chemistry; Immunology; In vitro; Phenotype; Biochemistry","score_opus":0.019770118770979037,"score_gpt":0.3164245580764139,"score_spread":0.29665443930543484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3214404858","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2156085,0.0028048574,0.78043884,0.00007928945,0.00016231586,0.0003421621,0.00023754576,0.000021160167,0.00030535567],"genre_scores_gemma":[0.18170884,0.00017970914,0.8159918,0.00018385125,0.00009773616,0.0001038334,0.001488439,0.000064472515,0.00018130557],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969419,0.0011221688,0.00045337772,0.00083026476,0.0001046328,0.00054761436],"domain_scores_gemma":[0.9987902,0.00039865606,0.00014222565,0.00038926152,0.00018149722,0.000098160286],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016912085,0.00033735947,0.0005292935,0.00010684223,0.00011511238,0.000043774387,0.0001831196,0.00041791692,0.000076098215],"category_scores_gemma":[0.00076289923,0.00031884568,0.00014054945,0.00029917018,0.00018058116,0.0000072817056,0.0001134358,0.00027343942,6.121313e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004890067,0.000070986156,0.0047085257,0.000059285587,0.00018215379,0.00006127407,0.00003125891,0.00035247652,0.9868176,0.0001855903,0.000014862049,0.007026975],"study_design_scores_gemma":[0.0017103186,0.0002724032,0.00025225457,0.00006694066,0.00005378905,0.00006128697,0.00015128653,0.0014598354,0.98897916,0.0005646071,0.0059895455,0.00043854705],"about_ca_topic_score_codex":0.000009356796,"about_ca_topic_score_gemma":0.00000702137,"teacher_disagreement_score":0.035552997,"about_ca_system_score_codex":0.000037040452,"about_ca_system_score_gemma":0.0001570088,"threshold_uncertainty_score":0.9999264},"labels":[],"label_agreement":null},{"id":"W3214439978","doi":"10.1007/978-1-0716-1752-6_39","title":"Applications of CPPs in Genome Editing of Plants","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Genome; Computational biology; Genome editing; Genome engineering; Nuclease; DNA; Nucleic acid; Biology; Chemistry; Genetics; Gene","score_opus":0.04300160743117211,"score_gpt":0.4366847330536231,"score_spread":0.393683125622451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3214439978","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00016669807,0.81464577,0.1843308,0.0000026252417,0.000091620306,0.00033134728,0.00009188811,0.0000018156529,0.000337432],"genre_scores_gemma":[0.000044864555,0.88725483,0.11161017,0.000024648438,0.00007996696,0.00018504399,0.00073616294,0.000027237,0.0000370879],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.997013,0.0011992129,0.0009322341,0.000541657,0.00005495896,0.00025898105],"domain_scores_gemma":[0.9987749,0.000092478556,0.00044326312,0.0005870154,0.00006973565,0.000032610697],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008647109,0.00026436575,0.0013565082,0.0003143621,0.000009299634,0.000002997737,0.000466724,0.0006784113,0.000018507259],"category_scores_gemma":[0.00021389664,0.00025441154,0.00034318835,0.00029460405,0.00012808129,0.0000010477248,0.00029432253,0.00025598315,0.0000016576912],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000054945476,0.00008237352,0.000060807382,0.0016119429,0.00013293454,0.000012208456,0.000016916098,0.000008402414,0.22982667,0.00019969651,0.000009151619,0.7680334],"study_design_scores_gemma":[0.00023593912,0.00019794318,0.000008449176,0.0018130518,0.00010024605,0.00004179831,0.00006522185,0.0000032040114,0.06480249,0.00032155705,0.9320421,0.00036795338],"about_ca_topic_score_codex":0.00003323367,"about_ca_topic_score_gemma":0.00002068463,"teacher_disagreement_score":0.932033,"about_ca_system_score_codex":0.000020404872,"about_ca_system_score_gemma":0.00020321706,"threshold_uncertainty_score":0.9999908},"labels":[],"label_agreement":null},{"id":"W3214527427","doi":"10.1007/978-1-0716-1900-1_5","title":"Two-Dimensional Electrophoresis Coupled with Western Blot as a Method to Detect Potential Neutralizing Antibody Targets from Gram-Negative Intracellular Bacteria","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Université de Montréal","funders":"","keywords":"Western blot; Antibody; Bacteria; Blot; Antigen; Biology; Intracellular; Protein subunit; Gel electrophoresis; Virology; Neutralizing antibody; Microbiology; Molecular biology; Cell biology; Immunology; Gene; Biochemistry; Genetics","score_opus":0.008204540351736811,"score_gpt":0.3429673579371784,"score_spread":0.33476281758544163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3214527427","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51707196,0.000087042165,0.4821828,0.0002680592,0.0001461178,0.00016951158,0.000015097904,0.000018348597,0.00004103206],"genre_scores_gemma":[0.10636106,0.000011799885,0.89225984,0.0010519353,0.000039724324,0.00003751964,0.00009040781,0.000038350267,0.00010936667],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961944,0.0019292062,0.00036607435,0.0008572454,0.00010949259,0.00054356677],"domain_scores_gemma":[0.9990816,0.0002356455,0.00012270932,0.00036573334,0.00003670754,0.00015759314],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00054057065,0.0003059449,0.00046348016,0.00009082965,0.00010789659,0.00005692498,0.00025108183,0.00016883717,0.0019983281],"category_scores_gemma":[0.0001297108,0.00027596005,0.00012318099,0.0004511436,0.000114711635,0.000076962926,0.00035898227,0.0003702812,0.0000972055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021385195,0.00007332614,0.00026273896,0.0000022497509,0.00009432993,0.00046966752,0.00014631035,0.0015757518,0.9914706,0.000017632703,0.000005608033,0.0056679538],"study_design_scores_gemma":[0.00066051696,0.00029706358,0.0090512615,0.000023047438,0.0000669648,0.00019103893,0.000037298167,0.0006669679,0.98655397,0.0013635536,0.0007462369,0.00034206925],"about_ca_topic_score_codex":0.005150103,"about_ca_topic_score_gemma":0.0007892206,"teacher_disagreement_score":0.41071093,"about_ca_system_score_codex":0.00017599056,"about_ca_system_score_gemma":0.000045398912,"threshold_uncertainty_score":0.99996924},"labels":[],"label_agreement":null},{"id":"W3215464126","doi":"10.1007/978-1-0716-1843-1_14","title":"Identifying Membrane Lateral Organization by Contrast-Matched Small Angle Neutron Scattering","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"","keywords":"Small-angle neutron scattering; Neutron scattering; Membrane; Vesicle; Scattering; Lipid raft; Small-angle scattering; Contrast (vision); Neutron spin echo; Materials science; Nanometre; Chemical physics; Biophysics; Nanotechnology; Chemistry; Optics; Physics; Biology; Biochemistry","score_opus":0.01761826192426103,"score_gpt":0.33316509163495367,"score_spread":0.31554682971069264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215464126","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7728877,0.0005121856,0.22564195,0.00007677145,0.00057242846,0.00018906407,0.000011238433,0.000023149936,0.000085524196],"genre_scores_gemma":[0.84478253,0.000051466035,0.15366772,0.0005989256,0.00024273994,0.000026463482,0.0004434838,0.000055401,0.00013128188],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980582,0.00059189234,0.00032604949,0.0004134985,0.00005653967,0.00055379706],"domain_scores_gemma":[0.9993582,0.000022600743,0.000104988605,0.0003483681,0.00005734203,0.00010850766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006056244,0.00024625837,0.00030001593,0.00008824822,0.000056696965,0.000024456009,0.00024488525,0.00035870986,0.000060208065],"category_scores_gemma":[0.00013635539,0.00023618837,0.0000788091,0.00021083522,0.00008822937,0.000008902832,0.0001709878,0.00017183209,0.000006733321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020369685,0.00005212772,0.022684932,0.000021795877,0.000030332129,0.0000024949127,0.00010703722,0.000005954517,0.97458285,0.000068953574,0.000025520452,0.0023976162],"study_design_scores_gemma":[0.0005896845,0.00006865398,0.0054032546,0.000008383521,0.00003555884,0.000038790673,0.000031649564,0.0000045737706,0.99115056,0.000044160446,0.002352291,0.00027244934],"about_ca_topic_score_codex":0.000051613446,"about_ca_topic_score_gemma":0.000011351463,"teacher_disagreement_score":0.071974225,"about_ca_system_score_codex":0.000025239138,"about_ca_system_score_gemma":0.000023885807,"threshold_uncertainty_score":0.9631482},"labels":[],"label_agreement":null},{"id":"W3215795852","doi":"10.1007/978-1-0716-1843-1_13","title":"Time-Resolved SANS to Measure Monomer Inter-Bilayer Exchange and Intra-Bilayer Translocation","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanopore and Nanochannel Transport Studies","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"","keywords":"Bilayer; Monomer; Kinetics; Particle (ecology); Chemical physics; Small-angle neutron scattering; Measure (data warehouse); Chemistry; Neutron scattering; Materials science; Scattering; Nanotechnology; Polymer; Optics; Physics; Membrane; Computer science; Organic chemistry","score_opus":0.025732017610023576,"score_gpt":0.31651875850203237,"score_spread":0.2907867408920088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215795852","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.069126904,0.0085751265,0.9207343,0.0002237047,0.00036569688,0.00032439473,0.000008504198,0.00009100047,0.00055037736],"genre_scores_gemma":[0.65590507,0.0004246618,0.34278503,0.0004298282,0.00012053872,0.0001990668,0.000016471704,0.000060863298,0.000058474696],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874014,0.00022997496,0.00028285358,0.0002435608,0.000054767796,0.00044870717],"domain_scores_gemma":[0.99956137,0.00007156231,0.000019677285,0.00020638356,0.00003132236,0.00010965986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009476594,0.00022540038,0.000359489,0.00022993248,0.0000310305,0.000005370475,0.00011351857,0.0002165076,0.00006822676],"category_scores_gemma":[0.00004162732,0.00020860987,0.000059785285,0.00024279702,0.00006241873,0.00005270021,0.00002875008,0.00018324897,0.00001788774],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023195322,0.00003135937,0.001181052,0.000041991923,0.00008505888,0.000003554608,0.0022689656,0.0001954589,0.92442787,0.00015548097,0.0000598842,0.07152615],"study_design_scores_gemma":[0.00080668944,0.00015607866,0.001369975,0.00006550117,0.000070646645,0.000011390729,0.00012455125,0.0010913734,0.9658489,0.0009512716,0.028835488,0.00066809414],"about_ca_topic_score_codex":0.000018925355,"about_ca_topic_score_gemma":0.000023685248,"teacher_disagreement_score":0.58677816,"about_ca_system_score_codex":0.000036571957,"about_ca_system_score_gemma":0.0000056676804,"threshold_uncertainty_score":0.8506864},"labels":[],"label_agreement":null},{"id":"W3215859165","doi":"10.1007/978-1-0716-1843-1_18","title":"Analyzing Morphological Properties of Early-Stage Toxic Amyloid β Oligomers by Atomic Force Microscopy","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Atomic force microscopy; Amyloid β; Amyloid (mycology); Protein aggregation; Protein folding; Biophysics; Disease; Chemistry; Amyloid fibril; Nanotechnology; Neuroscience; Pathology; Medicine; Biology; Biochemistry; Materials science","score_opus":0.0426611240975803,"score_gpt":0.41126699720654253,"score_spread":0.3686058731089622,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3215859165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9198957,0.024704522,0.05471401,0.00012564863,0.000035158722,0.00026185275,0.000027744678,0.000018488463,0.00021685597],"genre_scores_gemma":[0.7912494,0.00042862748,0.20784457,0.00018730605,0.000009898627,0.000044522392,0.00006156029,0.000021166054,0.00015297961],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99766326,0.0010404997,0.0003226765,0.00043127142,0.00010369451,0.0004386034],"domain_scores_gemma":[0.9992353,0.00007784045,0.000073567346,0.00036064713,0.000086720735,0.00016595918],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046102834,0.00017710439,0.00052117975,0.00013956365,0.000033449964,0.000008052418,0.00011896179,0.00018360921,0.00012188396],"category_scores_gemma":[0.00033565814,0.00013641958,0.00017110477,0.00034570866,0.00031230572,0.000021053369,0.0001332717,0.00023089559,0.000009345922],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026377567,0.0002431925,0.04854513,0.000052833322,0.001074325,0.0005897072,0.000036927926,0.0000017496458,0.94731086,0.00009882543,0.000010328456,0.0017723542],"study_design_scores_gemma":[0.0012017381,0.00037537716,0.0024704717,0.000051503364,0.00013024447,0.000045140245,0.000054793913,0.00005658671,0.9949806,0.00039616277,0.00011948809,0.00011790318],"about_ca_topic_score_codex":0.00009667692,"about_ca_topic_score_gemma":0.0000018926979,"teacher_disagreement_score":0.15313055,"about_ca_system_score_codex":0.00007154912,"about_ca_system_score_gemma":0.00017976742,"threshold_uncertainty_score":0.5563029},"labels":[],"label_agreement":null},{"id":"W3217770079","doi":"10.1007/978-1-0716-1803-5_25","title":"Electrochemical Aptamer-Based Sensors: A Platform Approach to High-Frequency Molecular Monitoring In Situ in the Living Body","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Aptamer; Microdialysis; Analyte; In vivo; Chemistry; Modular design; In situ; Electrochemistry; Nanotechnology; Combinatorial chemistry; Computer science; Materials science; Electrode; Chromatography; Biology; Organic chemistry; Physical chemistry; Molecular biology; Biotechnology","score_opus":0.018393418187667168,"score_gpt":0.35840060026590304,"score_spread":0.3400071820782359,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W3217770079","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53685534,0.0005503919,0.46161705,0.00018678489,0.000041101965,0.0002252335,0.0000022768393,0.000019517049,0.0005023383],"genre_scores_gemma":[0.53559595,0.00003699031,0.46369472,0.0004869617,0.00004226669,0.000064919404,0.00004997794,0.000021766606,0.00000645467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961219,0.0014812561,0.00055731455,0.0009805625,0.0001606911,0.00069828995],"domain_scores_gemma":[0.99875426,0.00016607207,0.000104882696,0.0008061853,0.00009154122,0.00007707428],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016472649,0.0003572709,0.0004936156,0.00031409497,0.000042226042,0.000031169013,0.00047407465,0.00051084376,9.660716e-7],"category_scores_gemma":[0.0013557499,0.0003076374,0.00018435167,0.0011063836,0.00012071108,0.0000050322046,0.00020589534,0.00054423575,8.4469116e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036361183,0.00024116751,0.0027381037,0.000015974245,0.000029330147,0.00011138859,0.000058937283,0.00012952853,0.9944959,0.000551561,0.0000023649368,0.0015893402],"study_design_scores_gemma":[0.0003295138,0.00015793576,0.0008172168,0.000060344668,0.000019606707,0.00004553346,0.00019595085,0.0001739689,0.99615484,0.0015176166,0.0001515577,0.0003759311],"about_ca_topic_score_codex":0.000064426036,"about_ca_topic_score_gemma":0.00004612193,"teacher_disagreement_score":0.0026323588,"about_ca_system_score_codex":0.000101005295,"about_ca_system_score_gemma":0.00011968218,"threshold_uncertainty_score":0.9999376},"labels":[],"label_agreement":null},{"id":"W32578352","doi":"10.1007/978-1-62703-071-7_16","title":"Psychoneuroimmunology and Natural Killer Cells: The Chromium Release Whole Blood Assay","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute on Alcohol Abuse and Alcoholism","keywords":"Effector; Lymphokine-activated killer cell; Flow cytometry; K562 cells; Biology; Lymphocyte; Innate immune system; Natural killer cell; Immunology; Cell biology; Cytotoxic T cell; Cytotoxicity; Cell; Interleukin 21; Immune system; In vitro; CD8; Biochemistry","score_opus":0.012886051075728405,"score_gpt":0.3228827194674998,"score_spread":0.3099966683917714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W32578352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3755822,0.13977408,0.36407295,0.0038215446,0.109132275,0.0017221044,0.0000066383413,0.00024973688,0.0056384807],"genre_scores_gemma":[0.9130009,0.00083208707,0.061035044,0.00490078,0.00018274548,0.000266162,0.00016678005,0.000087578635,0.019527934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.994483,0.004256173,0.00035067095,0.0003422088,0.000018008419,0.0005499602],"domain_scores_gemma":[0.9988587,0.000516304,0.00013063331,0.00043144636,0.00004072309,0.000022208016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015457465,0.0002297427,0.0003099733,0.00016770723,0.00015205404,0.000011203647,0.00023346831,0.0004088334,0.0004110096],"category_scores_gemma":[0.0004030907,0.00016381641,0.00010213482,0.00018159201,0.00042296978,0.00007289626,0.00016140536,0.0008996759,0.00023590666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010634102,0.00013511982,0.000737099,0.0000053223143,0.000122029,0.0000029292125,0.00019659229,0.0000014632653,0.9895831,0.0010653386,0.0011883678,0.0068563223],"study_design_scores_gemma":[0.0010544236,0.00016544982,0.002671932,0.000008657882,0.000057383342,0.00037065177,0.00017619914,0.000010429346,0.6316186,0.00022726013,0.36343366,0.00020536003],"about_ca_topic_score_codex":0.00006191597,"about_ca_topic_score_gemma":0.0000030369447,"teacher_disagreement_score":0.5374187,"about_ca_system_score_codex":0.000023678658,"about_ca_system_score_gemma":0.000016860404,"threshold_uncertainty_score":0.66802394},"labels":[],"label_agreement":null},{"id":"W32885586","doi":"10.1007/978-1-4939-2428-8_30","title":"Evidence-Based Decision-Making 8: Health Policy, a Primer for Researchers","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Global Cancer Incidence and Screening","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Primer (cosmetics); Psychology; Chemistry","score_opus":0.4943759483079363,"score_gpt":0.6309692792790921,"score_spread":0.13659333097115578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W32885586","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0070503107,0.008587372,0.9726326,0.0105576245,0.0001261717,0.0006715066,0.0000034328414,0.000028161427,0.00034284513],"genre_scores_gemma":[0.06304932,0.00005146821,0.92629755,0.010359354,0.00010282803,0.0000935556,0.0000056359013,0.000019144782,0.000021160262],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99725974,0.001165528,0.00037419816,0.0004095265,0.00022064359,0.00057034317],"domain_scores_gemma":[0.9976151,0.0013845512,0.000101693724,0.00039902717,0.00023552793,0.00026407302],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.007467272,0.0001373421,0.00043042522,0.00038462962,0.00004363928,0.000012507098,0.00021224059,0.0001689668,0.000013735663],"category_scores_gemma":[0.022012392,0.00011664854,0.00012164472,0.00062705827,0.0001378363,0.000040033417,0.00008750321,0.00025156193,0.000004405346],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0032269903,0.000070441834,0.016434673,0.00008979562,0.00004732844,0.00008097489,0.0003145172,0.00042050568,0.03490488,0.006145065,0.0011994062,0.9370654],"study_design_scores_gemma":[0.023310278,0.02720429,0.015946323,0.01583132,0.0002318207,0.0004800932,0.0028840676,0.03946222,0.1671216,0.49313462,0.21211644,0.0022769275],"about_ca_topic_score_codex":0.0009926385,"about_ca_topic_score_gemma":0.000049591064,"teacher_disagreement_score":0.93478847,"about_ca_system_score_codex":0.0005487106,"about_ca_system_score_gemma":0.0021663792,"threshold_uncertainty_score":0.9862256},"labels":[],"label_agreement":null},{"id":"W329938805","doi":"10.1007/978-1-61779-507-7_13","title":"Online Resources for Genomic Structural Variation","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Hospital for Sick Children; SRA International","keywords":"Structural variation; Biology; Genetics; Indel; Copy-number variation; Chromosome; Computational biology; Genome; Gene; Single-nucleotide polymorphism; Genotype","score_opus":0.026512776386015565,"score_gpt":0.33906196406907213,"score_spread":0.31254918768305656,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W329938805","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5276692,0.00029681882,0.4713241,0.000027231239,0.00015842072,0.0001655051,0.000045213663,0.000007447758,0.00030609567],"genre_scores_gemma":[0.32035872,0.00001603419,0.6789902,0.0002002558,0.00010239297,0.00004765743,0.0001449796,0.000017927181,0.000121835044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987324,0.00034679074,0.00028560348,0.00034669353,0.000026397745,0.00026210825],"domain_scores_gemma":[0.9994996,0.000026508185,0.00009863684,0.00028184545,0.0000553106,0.00003809349],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004404644,0.00014733005,0.00017508461,0.00008192888,0.000054045475,0.0000079744395,0.00022642498,0.00021671786,0.00004273725],"category_scores_gemma":[0.00015120703,0.00014035268,0.00009536276,0.00006990622,0.0000692859,0.0000022461543,0.00010756842,0.00007247035,0.0000013868125],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078582314,0.00003780549,0.004019079,0.000010002029,0.000045810917,0.000001184189,0.0004048057,0.00004584222,0.9865451,0.005813126,0.000008545582,0.002990149],"study_design_scores_gemma":[0.002218675,0.0013070655,0.11215106,0.000011378402,0.00007923742,0.000059258502,0.0005105469,0.0010105727,0.7912018,0.06816355,0.022459462,0.00082742807],"about_ca_topic_score_codex":0.00009897136,"about_ca_topic_score_gemma":0.000043316904,"teacher_disagreement_score":0.2076661,"about_ca_system_score_codex":0.000018595612,"about_ca_system_score_gemma":0.00003822288,"threshold_uncertainty_score":0.5723416},"labels":[],"label_agreement":null},{"id":"W331839031","doi":"10.1007/978-1-61779-307-3_16","title":"Megakaryocyte and Platelet Production from Human Cord Blood Stem Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Platelet Disorders and Treatments","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Héma-Québec","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Thrombopoietin; Megakaryocyte; Platelet; Cord blood; Ex vivo; Haematopoiesis; Stem cell; Thrombopoiesis; Immunology; Cell biology; CD34; Biology; Megakaryocytopoiesis; Flow cytometry; In vivo; Biotechnology","score_opus":0.04605514496948189,"score_gpt":0.3614809296325873,"score_spread":0.31542578466310545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W331839031","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9764615,0.0013069627,0.02068892,0.000053152056,0.00019334897,0.00032764048,0.000007227428,0.00003168632,0.000929521],"genre_scores_gemma":[0.39789745,0.00017389978,0.60139024,0.0002158545,0.000029980692,0.000035033627,0.00004016131,0.000024992143,0.00019237022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875706,0.0003466678,0.00022426287,0.00041678586,0.00004282311,0.00021241147],"domain_scores_gemma":[0.99954927,0.000035924684,0.00006753315,0.00026187437,0.000021848813,0.00006355705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030006134,0.00015433428,0.0003828848,0.000112902315,0.000035477013,0.000003654025,0.000057433863,0.00017383131,0.00005246635],"category_scores_gemma":[0.000026655984,0.00012924452,0.000044994285,0.00010576758,0.00010237918,0.000019301537,0.000049390397,0.00015877871,0.0000058738474],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016921222,0.00025831186,0.011477026,0.000013712375,0.00019413601,0.00075011514,0.00021501728,1.9089967e-7,0.94353426,0.00029379394,0.000010839263,0.043083385],"study_design_scores_gemma":[0.001755464,0.0006884069,0.004152942,0.000022845568,0.00013762615,0.00012735085,0.000050508523,0.000009068643,0.9848263,0.0075431447,0.0005549036,0.00013138329],"about_ca_topic_score_codex":0.00034110728,"about_ca_topic_score_gemma":0.000021816813,"teacher_disagreement_score":0.58070135,"about_ca_system_score_codex":0.000015434944,"about_ca_system_score_gemma":0.000014481262,"threshold_uncertainty_score":0.5270439},"labels":[],"label_agreement":null},{"id":"W33524485","doi":"10.1007/978-1-59745-427-8_6","title":"Methods for Functional Proteomic Analyses","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Computational biology; Computer science; Biology","score_opus":0.07245271827269688,"score_gpt":0.5195018216331212,"score_spread":0.4470491033604243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W33524485","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024463236,0.00031383647,0.9945085,0.00038315787,0.000025960264,0.00033057117,0.000010163218,0.000094517956,0.0018869531],"genre_scores_gemma":[0.0013483852,0.000019534085,0.9972009,0.00038640632,0.00005032643,0.00077144743,0.00005527575,0.000016297377,0.00015139389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988188,0.0002052809,0.00029692787,0.0003970236,0.000026861087,0.00025507668],"domain_scores_gemma":[0.9992111,0.00022762279,0.00010727438,0.0003614813,0.000051702224,0.00004085577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074585,0.00015138215,0.00026251355,0.00009481766,0.00005731594,0.000008434446,0.00020465572,0.00022443008,0.000084964006],"category_scores_gemma":[0.00038091186,0.00014334732,0.00013792497,0.00017999807,0.000062382125,0.000018992128,0.00003833523,0.0002026222,0.0000011739667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024697321,0.00003279661,0.000037229132,0.0000070996407,0.000011572253,4.337198e-7,0.0000047082804,0.0000708523,0.8369472,0.024380984,0.000011087075,0.13847135],"study_design_scores_gemma":[0.00017697875,0.00003344612,0.000024811081,0.000004345335,0.000011432059,0.0000043708574,0.000003827308,0.0010448995,0.6817814,0.30900446,0.007797154,0.000112852154],"about_ca_topic_score_codex":0.000005394236,"about_ca_topic_score_gemma":2.9350625e-7,"teacher_disagreement_score":0.28462347,"about_ca_system_score_codex":0.00005463976,"about_ca_system_score_gemma":0.00003007859,"threshold_uncertainty_score":0.5845534},"labels":[],"label_agreement":null},{"id":"W341100859","doi":"10.1007/978-1-61779-185-7_18","title":"Development of Biological Tools to Study Claudins in the Male Reproductive Tract","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"","keywords":"Epididymis; Claudin; Tight junction; Biology; Reproductive tract; Pathological; Cell biology; Andrology; Sperm; Medicine; Internal medicine; Endocrinology; Genetics","score_opus":0.25136701561916214,"score_gpt":0.44111630755491466,"score_spread":0.18974929193575252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W341100859","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84938115,0.000048045284,0.14755984,0.00007489104,0.00019900355,0.0004946245,0.0000021703495,0.000009006977,0.0022312505],"genre_scores_gemma":[0.63329494,0.000003371257,0.36611703,0.0004704394,0.000009511764,0.00009411024,2.8526546e-7,0.0000035179578,0.00000679458],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966361,0.002192771,0.00036407606,0.0005274719,0.000067840556,0.00021174048],"domain_scores_gemma":[0.99922407,0.0003174701,0.00007549337,0.00034033955,0.000022306107,0.000020349762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020116016,0.000121872785,0.0002711111,0.00013475431,0.00005311001,0.000004117455,0.00032686026,0.000078851466,0.000048118174],"category_scores_gemma":[0.0023705137,0.00007343783,0.00003675613,0.0005316049,0.00013469596,0.00001912643,0.00016031721,0.00018998107,0.0000040948426],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008007796,0.0003031308,0.030478893,0.0000016108124,0.000009953935,0.000042287276,0.018174894,0.0000011756072,0.9019155,0.0025148469,0.000003697381,0.046473958],"study_design_scores_gemma":[0.0002454368,0.00044793336,0.20431922,0.000002263867,0.000004876166,0.00002406975,0.0028836655,5.700389e-7,0.786567,0.0035204545,0.0018675547,0.00011696655],"about_ca_topic_score_codex":0.000013934397,"about_ca_topic_score_gemma":0.000012954273,"teacher_disagreement_score":0.21855721,"about_ca_system_score_codex":0.00001593464,"about_ca_system_score_gemma":0.000020331483,"threshold_uncertainty_score":0.2994708},"labels":[],"label_agreement":null},{"id":"W34589939","doi":"10.1007/978-1-61779-968-6_25","title":"Characterization of Single-Domain Antibodies with an Engineered Disulfide Bond","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Chemistry; Proteases; Single-domain antibody; Antibody; Circular dichroism; Recombinant DNA; Immunoglobulin light chain; Biophysics; Combinatorial chemistry; Computational biology; Biochemistry; Enzyme; Biology","score_opus":0.03660126120845924,"score_gpt":0.3967619214263017,"score_spread":0.36016066021784243,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W34589939","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7093846,0.00028665,0.2894022,0.00019786827,0.000050973027,0.00015527733,0.000010866675,0.00001123971,0.0005003005],"genre_scores_gemma":[0.3641723,0.00003812335,0.6352952,0.00014467757,0.00006732429,0.000012661434,0.0001572746,0.000018147064,0.000094251256],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866974,0.00044705483,0.00024659836,0.00018197892,0.000106683015,0.00034793178],"domain_scores_gemma":[0.9994348,0.00010025735,0.00006528438,0.00021837973,0.000063468455,0.000117783944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007363823,0.0001350139,0.00036717218,0.0001937269,0.000019919402,0.0000034869274,0.00008387956,0.00011316016,0.000037891587],"category_scores_gemma":[0.00012925628,0.00009574548,0.000050430262,0.00023093245,0.00018592783,0.00005062039,0.00004856427,0.00015116153,0.00000223247],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034559725,0.00022397753,0.061569232,0.00006254262,0.000043748034,0.00002167762,0.0002307986,6.80405e-7,0.9272203,0.0037940743,0.0000010425864,0.006486359],"study_design_scores_gemma":[0.0005518548,0.00086450507,0.058896203,0.00004694955,0.000022372082,0.000089214016,0.000060971724,0.00005092711,0.93617,0.0005785742,0.002539024,0.00012942676],"about_ca_topic_score_codex":0.00003443577,"about_ca_topic_score_gemma":0.000004125545,"teacher_disagreement_score":0.34589303,"about_ca_system_score_codex":0.000020641886,"about_ca_system_score_gemma":0.000027998189,"threshold_uncertainty_score":0.39043877},"labels":[],"label_agreement":null},{"id":"W34598276","doi":"10.1007/978-1-61779-367-7_11","title":"Isolation, Characterization, and Culture of Normal Human Intestinal Crypt and Villus Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Digestive system and related health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":41,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Crypt; Compartment (ship); Progenitor cell; Biology; Cell biology; Intestinal villus; Intestinal epithelium; Epithelium; Stem cell; Cell; Intestinal mucosa; Cell culture; Brush border; Internal medicine; Genetics; Endocrinology; Medicine","score_opus":0.01789131099123165,"score_gpt":0.3391901333184565,"score_spread":0.32129882232722484,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W34598276","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38768637,0.0006095944,0.61033434,0.000015709626,0.00007375107,0.00014854482,0.000007965737,0.0000052093214,0.0011185076],"genre_scores_gemma":[0.5698935,0.0002460525,0.4293169,0.00016343064,0.00003889155,0.000013984896,0.000106223386,0.000018294892,0.00020274574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987336,0.00047458342,0.000299844,0.0002893513,0.00002859286,0.00017405277],"domain_scores_gemma":[0.9995487,0.000011143156,0.00014088028,0.00015198921,0.00008751357,0.000059781352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004911336,0.00012966373,0.00020371875,0.00007721885,0.000043606055,0.0000039592965,0.00008282896,0.00027233304,0.00001274351],"category_scores_gemma":[0.00008461308,0.0001114909,0.000027867693,0.000090198715,0.00020447181,0.0000031799404,0.00009618352,0.00010437388,4.753452e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027476704,0.00002966767,0.023706522,0.000037335023,0.00002020561,0.0000027191618,0.00043397277,7.296734e-7,0.9722784,0.0015221185,0.00000480604,0.0019360209],"study_design_scores_gemma":[0.00054307206,0.0007427144,0.030241253,0.000037454458,0.000019189963,0.00005000095,0.000090995534,0.00003951603,0.9651568,0.0012627632,0.0016239507,0.00019232262],"about_ca_topic_score_codex":0.000039634597,"about_ca_topic_score_gemma":0.000006004692,"teacher_disagreement_score":0.18220711,"about_ca_system_score_codex":0.0000047088884,"about_ca_system_score_gemma":0.000025896668,"threshold_uncertainty_score":0.4546467},"labels":[],"label_agreement":null},{"id":"W34714686","doi":"10.1007/978-1-60761-863-8_3","title":"The Principles of MiRNA-Masking Antisense Oligonucleotides Technology","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":116,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"Canadian Institutes of Health Research","keywords":"Masking (illustration); Oligonucleotide; microRNA; Computer science; Computational biology; Biology; Genetics; Art; Gene","score_opus":0.015598557543837035,"score_gpt":0.3636516161898383,"score_spread":0.3480530586460013,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W34714686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8545158,0.0011338476,0.14170636,0.00028096908,0.0004383516,0.00014957064,0.000004845482,0.000012303705,0.0017579731],"genre_scores_gemma":[0.67474604,0.0002598477,0.3244876,0.0001320227,0.000059470385,0.000029428744,0.000011090376,0.000022107815,0.0002524257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984752,0.00034915673,0.0003914953,0.00038321875,0.000051635743,0.0003493079],"domain_scores_gemma":[0.9989199,0.00008949697,0.0001580153,0.00068625103,0.000109899745,0.00003646224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010329648,0.00017043856,0.0002349799,0.0001480475,0.00007400719,0.000011637121,0.000551237,0.0003939766,0.000012567152],"category_scores_gemma":[0.0009817173,0.00012892393,0.00011275741,0.00022331254,0.0005690985,0.0000019072513,0.0003167027,0.00030394943,0.000004854433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035762518,0.000026427067,0.0073041366,0.0000054103602,0.000039405804,0.0000076034426,0.00001455599,0.000020339352,0.9580454,0.008349573,0.000022970213,0.026128383],"study_design_scores_gemma":[0.00020369818,0.00020203747,0.00091919454,0.000009185241,0.000008639423,0.000039497805,0.00006384201,0.00008540402,0.9559919,0.0030490216,0.039284106,0.00014347835],"about_ca_topic_score_codex":0.000023557735,"about_ca_topic_score_gemma":0.00013722687,"teacher_disagreement_score":0.18278122,"about_ca_system_score_codex":0.0000048542333,"about_ca_system_score_gemma":0.000058861744,"threshold_uncertainty_score":0.5257365},"labels":[],"label_agreement":null},{"id":"W35337143","doi":"10.1007/978-1-4939-1658-0_6","title":"Carrot (Daucus carota L.)","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Simon Fraser University","funders":"","keywords":"Daucus carota; Biology; Transformation (genetics); Protoplast; Selectable marker; Genetically modified crops; Transgene; Agrobacterium; Petiole (insect anatomy); Plant disease resistance; Botany; Horticulture; Gene; Genetics","score_opus":0.014884093175697442,"score_gpt":0.3554167487822987,"score_spread":0.34053265560660123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W35337143","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08067351,0.002287445,0.9121911,0.00029315965,0.00036284584,0.00017532369,0.0000064032597,0.000016347478,0.003993844],"genre_scores_gemma":[0.26895323,0.00015004181,0.7267058,0.0015280731,0.00054312544,0.00009495772,0.00043736424,0.00004495227,0.0015424676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982254,0.0008467899,0.00020715978,0.00041442903,0.000043505403,0.0002627538],"domain_scores_gemma":[0.9994461,0.00002379252,0.000055546174,0.00037725052,0.00004005015,0.00005723736],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006736826,0.00015953906,0.0002013767,0.00006271035,0.00004203758,0.000009338447,0.00021267097,0.00031902865,0.000012429597],"category_scores_gemma":[0.00034264213,0.00013589849,0.00007755883,0.000101762686,0.00008580137,0.0000012974539,0.00008743957,0.00011787891,0.000008797435],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013610626,0.000017361808,0.0013664534,0.0000050124636,0.000018351502,0.0000035044784,0.000021333666,0.00008281595,0.981512,0.0022443,0.00033781677,0.014377452],"study_design_scores_gemma":[0.0002823807,0.00015243245,0.00018925144,0.000004002265,0.000008609798,0.000027199685,0.000007793622,0.00012893984,0.7662811,0.000777603,0.2319727,0.00016796404],"about_ca_topic_score_codex":0.00013593998,"about_ca_topic_score_gemma":0.00028445336,"teacher_disagreement_score":0.23163487,"about_ca_system_score_codex":0.000012548871,"about_ca_system_score_gemma":0.000041649433,"threshold_uncertainty_score":0.55417794},"labels":[],"label_agreement":null},{"id":"W36265197","doi":"10.1007/978-1-60327-009-0_8","title":"Current Methods in Investigating the Development of the Female Reproductive System","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec; Institut National de la Recherche Scientifique","funders":"National Institute of Environmental Health Sciences; Canadian Institutes of Health Research","keywords":"Female reproductive system; Biology; Endometriosis; Infertility; Ovary; Physiology; Reproductive system; Hormone; Oocyte; Bioinformatics; Embryo; Pregnancy; Medicine; Endocrinology; Gynecology; Cell biology; Genetics","score_opus":0.08667828654998085,"score_gpt":0.4655040770976188,"score_spread":0.378825790547638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W36265197","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55596775,0.0041452004,0.43587753,0.0015002375,0.0005650676,0.0009559686,0.0000010856297,0.000021851884,0.00096532045],"genre_scores_gemma":[0.24129365,0.0000051482134,0.75838464,0.00019903727,0.000045463803,0.000047937243,0.0000029742491,0.00000629954,0.0000148306535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9920129,0.006262378,0.00072913314,0.0006416532,0.00007831277,0.0002755923],"domain_scores_gemma":[0.9983531,0.00031301868,0.0002388279,0.0009319746,0.00012839687,0.000034684777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0108715845,0.00016851947,0.00049345056,0.00010438152,0.0000709643,0.0000022955933,0.0002771664,0.0001700303,0.000004492495],"category_scores_gemma":[0.0065061115,0.00009092615,0.000100485544,0.00055480585,0.00044543121,0.000013636662,0.00014091196,0.0005703946,0.0000012195743],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015212856,0.00010498755,0.058213886,0.00006282516,0.00003296401,0.0000021903136,0.002015383,0.000009258999,0.75593907,0.0022262584,0.000002871625,0.1812382],"study_design_scores_gemma":[0.00027420616,0.00007633985,0.4256107,0.00010954003,0.000019831852,0.000017517177,0.00036458453,0.000059001934,0.5682955,0.004358758,0.0007333096,0.00008074385],"about_ca_topic_score_codex":0.000013893442,"about_ca_topic_score_gemma":0.0000037230589,"teacher_disagreement_score":0.3673968,"about_ca_system_score_codex":0.00013645928,"about_ca_system_score_gemma":0.00019440467,"threshold_uncertainty_score":0.7788893},"labels":[],"label_agreement":null},{"id":"W374569638","doi":"10.1007/978-1-60761-444-9_8","title":"De Novo Sequencing Methods in Proteomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":92,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo; Western University","funders":"","keywords":"Computational biology; Tandem mass spectrometry; Genome; Sequence assembly; Sequence (biology); DNA sequencing; Proteomics; Biology; Homology (biology); Mass spectrometry; Chemistry; Genetics; Gene; Chromatography","score_opus":0.03338148000166237,"score_gpt":0.45569621769047863,"score_spread":0.4223147376888163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W374569638","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.03105134,0.00021106974,0.96296656,0.00029354254,0.00001330325,0.00023793675,0.0000036029426,0.00008554204,0.005137128],"genre_scores_gemma":[0.003841296,0.000047453985,0.9951506,0.0005832828,0.00002424395,0.00026210223,0.000009842454,0.000020719051,0.000060451544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834514,0.0004254525,0.0003833564,0.00040850372,0.00003224012,0.00040528167],"domain_scores_gemma":[0.9992117,0.00015706795,0.000105721665,0.00044888293,0.000024574514,0.00005202286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015135732,0.0001713497,0.00029385657,0.00012686451,0.000031611362,0.000010940936,0.0003262649,0.00034837716,0.000043549175],"category_scores_gemma":[0.00045977728,0.00018101014,0.00006944541,0.0002987821,0.0000682942,0.000023474597,0.00007493869,0.00051852677,0.0000011323707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000100940315,0.00002567973,0.00040640408,0.000009296209,0.0000031720513,0.00001602047,0.00005449064,0.00019105151,0.9057678,0.021205366,7.0351933e-7,0.07230993],"study_design_scores_gemma":[0.00016008099,0.000019968957,0.000020032365,0.000016834583,0.0000031052668,0.000025441508,0.000019280278,0.0012342555,0.7161955,0.28100204,0.001161002,0.00014241382],"about_ca_topic_score_codex":0.0000383488,"about_ca_topic_score_gemma":0.0000038014548,"teacher_disagreement_score":0.25979668,"about_ca_system_score_codex":0.00030268653,"about_ca_system_score_gemma":0.00007869753,"threshold_uncertainty_score":0.7381379},"labels":[],"label_agreement":null},{"id":"W37484243","doi":"10.1007/978-1-59745-250-2_21","title":"Fusion Assays and Models for the Trophoblast","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto; Mount Sinai Hospital","funders":"","keywords":"Trophoblast; Syncytiotrophoblast; Syncytium; Cell fusion; Placentation; Placenta; Cell biology; Biology; Cytotrophoblast; Cell; Fetus; Pregnancy; Genetics","score_opus":0.06362318052564814,"score_gpt":0.39467577881743043,"score_spread":0.3310525982917823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W37484243","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013730002,0.0139240315,0.96929914,0.0010416611,0.00009808923,0.00038377944,0.0000032552489,0.000014781709,0.0015052413],"genre_scores_gemma":[0.11592683,0.002465471,0.88029104,0.0009933916,0.000039113613,0.00014415763,0.0000043746163,0.000012260819,0.0001233304],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9991664,0.00030166504,0.00013689132,0.00019275463,0.00003258626,0.00016966072],"domain_scores_gemma":[0.9991857,0.0005446669,0.000028881384,0.00019008045,0.000025789312,0.000024893374],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057715,0.00009053325,0.00023170488,0.00004688741,0.000100598096,0.0000014968359,0.000060339185,0.000105066436,0.000004474594],"category_scores_gemma":[0.0002965568,0.000055546254,0.000058982023,0.00007952038,0.00020051138,0.000010211003,0.00007602602,0.0001269327,4.5075373e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005454841,0.00009610559,0.009222866,0.000093966126,0.00020218779,0.0000853732,0.0015121058,0.00015309827,0.8209885,0.025442012,0.00027449866,0.14138386],"study_design_scores_gemma":[0.01370088,0.003474344,0.036971867,0.00040928813,0.0005626949,0.0015506956,0.00063996355,0.09731183,0.31873995,0.47330528,0.052275404,0.0010577828],"about_ca_topic_score_codex":0.000016821778,"about_ca_topic_score_gemma":0.0000040760506,"teacher_disagreement_score":0.50224847,"about_ca_system_score_codex":0.000010032647,"about_ca_system_score_gemma":0.000019559491,"threshold_uncertainty_score":0.22651105},"labels":[],"label_agreement":null},{"id":"W37843407","doi":"10.1007/978-1-4939-2495-0_15","title":"Culture and Transfection of Axolotl Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Axolotl; Multicellular organism; Biology; Organism; Cell biology; Model organism; Regeneration (biology); Transfection; Cell culture; Computational biology; Cell; Genetics; Gene","score_opus":0.021300531210173904,"score_gpt":0.368150647348248,"score_spread":0.3468501161380741,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W37843407","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2968479,0.0030332112,0.69900405,0.000046486675,0.000215087,0.0001259378,0.0000031535321,0.000004932304,0.000719224],"genre_scores_gemma":[0.41109827,0.00059818744,0.58770734,0.000102000835,0.000101097896,0.000015019219,0.00002493464,0.000019532567,0.00033360714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989699,0.0003694577,0.00017461229,0.0003193317,0.000035854566,0.00013082771],"domain_scores_gemma":[0.9996454,0.0000054745315,0.000048140457,0.00018482364,0.000066430126,0.00004971693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006292254,0.00010061461,0.00015305147,0.000051602347,0.000012704988,0.0000030059477,0.00007125941,0.00022631125,0.0000017363644],"category_scores_gemma":[0.000100952,0.00008713711,0.00004428775,0.0000949237,0.00013113192,9.964496e-7,0.000051024093,0.00007721818,5.5008076e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056226098,0.000029282124,0.0009646805,0.000009557145,0.000016505785,0.000001053063,0.00007484253,0.00007556261,0.9907931,0.0004848643,0.000036103815,0.007458197],"study_design_scores_gemma":[0.000360153,0.0006848872,0.00024238935,0.0000033623155,0.000011123411,0.000017684459,0.00007196717,0.00004250246,0.97507423,0.0015827548,0.02180758,0.000101352634],"about_ca_topic_score_codex":0.000023572851,"about_ca_topic_score_gemma":0.0000067184064,"teacher_disagreement_score":0.11425036,"about_ca_system_score_codex":0.0000058119226,"about_ca_system_score_gemma":0.000027229242,"threshold_uncertainty_score":0.35533482},"labels":[],"label_agreement":null},{"id":"W38247143","doi":"10.1007/978-1-60327-192-9_2","title":"Comparative Genomic Hybridization on BAC Arrays","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Centre for Applied Research in Cancer Control; Occupational Cancer Research Centre; BC Cancer Agency","funders":"National Institute of Dental and Craniofacial Research","keywords":"Comparative genomic hybridization; Biology; genomic DNA; Bacterial artificial chromosome; Computational biology; Genome; Oligonucleotide; Genetics; Locus (genetics); Copy number analysis; DNA nanoball sequencing; DNA; Copy-number variation; Gene; Genomic library","score_opus":0.021753624960340112,"score_gpt":0.3596490084330904,"score_spread":0.3378953834727503,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W38247143","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3708707,0.00033533148,0.62321234,0.00019667619,0.00013796418,0.00016963849,0.000011855003,0.000011947819,0.005053514],"genre_scores_gemma":[0.69667125,0.000044491382,0.30182436,0.0010371787,0.00008381404,0.000018262637,0.00015390484,0.000010280954,0.00015648853],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984516,0.0005798348,0.00027380005,0.00038942543,0.000041855234,0.00026346775],"domain_scores_gemma":[0.9994755,0.00002532532,0.000086072156,0.00032303922,0.00004380038,0.000046261113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040467427,0.00017677968,0.00023668422,0.000100948404,0.000054511875,0.000013714014,0.00019317426,0.00016771916,0.000029963172],"category_scores_gemma":[0.0000744424,0.00017224485,0.00008015558,0.00011912587,0.00006119596,0.000002067627,0.000046224046,0.0001150822,0.000014212778],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048615188,0.00006588737,0.0005098632,0.0000020430634,0.000021572696,0.0000033561164,0.00008612636,0.0013065897,0.98434055,0.010839884,0.00007075147,0.0027047833],"study_design_scores_gemma":[0.00053387904,0.00079928635,0.004238115,0.000006609144,0.000010895869,0.000017065959,0.00009026645,0.00022711654,0.97256035,0.009310295,0.011927949,0.00027816463],"about_ca_topic_score_codex":0.000009047976,"about_ca_topic_score_gemma":0.0000054336597,"teacher_disagreement_score":0.3258005,"about_ca_system_score_codex":0.000031119667,"about_ca_system_score_gemma":0.000048482183,"threshold_uncertainty_score":0.70239407},"labels":[],"label_agreement":null},{"id":"W39180896","doi":"10.1007/978-1-61737-967-3_11","title":"Recent Developments in Difficult Protein Expression: A Guide to E. coli Strains, Promoters, and Relevant Host Mutations","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":67,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Petroleum Technology Research Centre; Petroleum Technology Alliance Canada","keywords":"Escherichia coli; Biology; Computational biology; Heterologous; Protein expression; Host (biology); Promoter; Genetics; Gene expression; Gene","score_opus":0.02725655400065629,"score_gpt":0.41939982474566573,"score_spread":0.39214327074500943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W39180896","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0027635354,0.9637455,0.029354623,0.00007895196,0.00044392192,0.0031168505,0.00012125094,0.00002396598,0.00035143318],"genre_scores_gemma":[0.00002161066,0.6783021,0.31912327,0.00018501352,0.000078373385,0.0015673073,0.00044909216,0.00006925983,0.00020400323],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99543214,0.0017384486,0.00095955975,0.0011945594,0.00011505604,0.00056022644],"domain_scores_gemma":[0.9986682,0.000050506627,0.00029404194,0.00063409796,0.000114692804,0.00023844022],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008742228,0.00057971873,0.0010368709,0.00036511073,0.00008782674,0.000041543157,0.00041119257,0.0010867137,0.000022602033],"category_scores_gemma":[0.0014525055,0.0004856292,0.00017536785,0.00049776904,0.00014181953,0.0000038668313,0.00057241815,0.00059655873,0.000006456696],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017779665,0.0001244395,0.000023476628,0.0005070947,0.0000374081,0.000037841055,0.000035071844,0.0000022109534,0.45902583,0.000050534865,0.00016807485,0.5399702],"study_design_scores_gemma":[0.00046693336,0.00028708624,0.00004670814,0.0020700006,0.000041657113,0.00004030141,0.00001887132,0.0000014913604,0.03214024,0.00014502705,0.9641366,0.00060507964],"about_ca_topic_score_codex":0.000024432013,"about_ca_topic_score_gemma":0.000077534976,"teacher_disagreement_score":0.9639685,"about_ca_system_score_codex":0.00007835865,"about_ca_system_score_gemma":0.00047583596,"threshold_uncertainty_score":0.99975955},"labels":[],"label_agreement":null},{"id":"W392936092","doi":"10.1007/978-1-61779-160-4","title":"Signal Transduction Protocols","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Robarts Research Institute; National Institutes of Health; Université de Montréal; Medical School, University of Michigan; Université de Montpellier; Université Paris Descartes; University of Toronto; McGill University Health Centre; McGill University; Hotchkiss Brain Institute, University of Calgary; Johns Hopkins University; Leslie Dan Faculty of Pharmacy, University of Toronto; University of Michigan","keywords":"Signal transduction; Computer science; Cell biology; Biology","score_opus":0.03687157559085965,"score_gpt":0.38027982482041095,"score_spread":0.3434082492295513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W392936092","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006629511,0.0011617821,0.92880976,0.000015112995,0.0003562768,0.0042692083,0.000024185629,0.000024569352,0.065272816],"genre_scores_gemma":[0.000047831083,0.00016005403,0.87147707,0.0003782183,0.00064539415,0.00441902,0.00070094556,0.00019260918,0.12197886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968167,0.0010090225,0.0005982654,0.0009852832,0.00010642636,0.00048432086],"domain_scores_gemma":[0.9989039,0.00002643602,0.00025465345,0.0006225243,0.00009361723,0.000098871686],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013451754,0.000498701,0.0006222067,0.00022388474,0.000047112644,0.000016421815,0.00049629604,0.0016415854,0.0011510121],"category_scores_gemma":[0.00007822589,0.00049398525,0.0003546814,0.00008463761,0.00016755673,0.0000020517814,0.0001417099,0.00054388493,0.000018383756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009836122,0.000044717046,0.000009219339,0.000053901796,0.000091800466,0.000016405404,0.000031181273,0.000014043921,0.9678319,0.004967996,0.00050546334,0.026334992],"study_design_scores_gemma":[0.00034931794,0.0005574921,0.000001078248,0.00006221453,0.000025977872,0.00002254781,0.000004508245,0.000009685492,0.6523446,0.02996288,0.3162446,0.0004151128],"about_ca_topic_score_codex":0.000011048057,"about_ca_topic_score_gemma":0.0000072720964,"teacher_disagreement_score":0.31573915,"about_ca_system_score_codex":0.00005821486,"about_ca_system_score_gemma":0.0003243772,"threshold_uncertainty_score":0.99976206},"labels":[],"label_agreement":null},{"id":"W4098901","doi":"10.1007/978-1-60761-362-6_31","title":"Analysis of Uterine Natural Killer Cells in Mice","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":74,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Queen's University","funders":"Biotechnology and Biological Sciences Research Council; Natural Sciences and Engineering Research Council of Canada","keywords":"Decidualization; Biology; Decidua; Andrology; Population; Stromal cell; Blastocyst; Cell biology; Decidual cells; Immunology; Embryo; Internal medicine; Embryogenesis; Pregnancy; Fetus; Placenta; Cancer research; Genetics; Medicine","score_opus":0.01360001406415469,"score_gpt":0.3666533476033617,"score_spread":0.35305333353920704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4098901","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69567275,0.041583855,0.25535604,0.0003543783,0.0034759014,0.00057034555,0.00001948378,0.000039671646,0.002927596],"genre_scores_gemma":[0.90395737,0.00006455186,0.09465296,0.00019002841,0.000008608315,0.0000111726395,0.00004778016,0.0000069362977,0.0010606222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99644834,0.0023411212,0.00046885293,0.0004430321,0.0000141935025,0.00028445042],"domain_scores_gemma":[0.99927795,0.0001560545,0.00013530585,0.00037787828,0.00004385181,0.000008977713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011131121,0.00015150731,0.00066153455,0.00066515023,0.000013835228,0.0000018506055,0.00023436529,0.00026576562,0.00014558052],"category_scores_gemma":[0.00017377439,0.00012911025,0.00016654865,0.000928821,0.00012166772,0.000019144416,0.000054143766,0.00024027037,0.00001038592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004062226,0.000072382936,0.008325824,0.000009053802,0.0002646993,0.00001180449,0.00021175011,0.00007211667,0.97316945,0.0009735043,0.0000126405175,0.016836181],"study_design_scores_gemma":[0.0006808375,0.00017877972,0.062363096,0.000022618236,0.0000909743,0.000012113915,0.000046159777,0.000018318731,0.9304773,0.0015178194,0.004402443,0.00018952579],"about_ca_topic_score_codex":0.00012452647,"about_ca_topic_score_gemma":0.00002607665,"teacher_disagreement_score":0.2082846,"about_ca_system_score_codex":0.00002340778,"about_ca_system_score_gemma":0.000016087428,"threshold_uncertainty_score":0.52649635},"labels":[],"label_agreement":null},{"id":"W41605747","doi":"10.1007/978-1-60327-164-6_13","title":"Phage Classification and Characterization","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":339,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Prokaryote; Virus classification; Biology; Predictive value; Computational biology; Evolutionary biology; Virology; Bacteria; Genome; Genetics; Medicine","score_opus":0.01881916650877489,"score_gpt":0.36900598151913283,"score_spread":0.3501868150103579,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W41605747","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4089072,0.000014916987,0.58861697,0.00049961725,0.00006591341,0.00007334913,0.0000017124562,0.000011362525,0.001808948],"genre_scores_gemma":[0.5357729,0.0000431106,0.46278873,0.0011459184,0.000013101498,0.000007805976,0.00003364315,0.000005002306,0.00018975014],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9993862,0.0002123877,0.00010982504,0.0001756116,0.000014210339,0.00010175586],"domain_scores_gemma":[0.99982464,0.000015966063,0.00003777481,0.00009724851,0.0000022871313,0.000022073205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020512195,0.000056467143,0.000073292074,0.000030130386,0.000025496294,0.000009592525,0.000054704848,0.000064636566,0.00025814323],"category_scores_gemma":[0.000029024395,0.000053564745,0.00001525663,0.00009932878,0.000051171788,0.000051296647,0.000029008525,0.000070592985,0.000020120442],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028604973,0.000023074119,0.00069485256,3.5459064e-7,7.8122366e-7,0.0000012323454,0.000033703418,7.392741e-7,0.83733314,0.00047492405,0.0000030921692,0.16143127],"study_design_scores_gemma":[0.00016494762,0.00010724053,0.7184501,0.0000038066491,0.0000052357004,0.000018083765,0.000010893592,0.00059228373,0.26199785,0.0025189267,0.016012534,0.00011809295],"about_ca_topic_score_codex":0.000018942348,"about_ca_topic_score_gemma":0.0000041406443,"teacher_disagreement_score":0.71775526,"about_ca_system_score_codex":0.00002886254,"about_ca_system_score_gemma":0.0000014772083,"threshold_uncertainty_score":0.28264874},"labels":[],"label_agreement":null},{"id":"W4200009422","doi":"10.1007/978-1-0716-1835-6_7","title":"Monitoring Virus Intercellular Movement from Primary Infected Cells to Neighboring Cells in Plants","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"mCherry; Green fluorescent protein; Biology; Movement protein; Plant cell; Agroinfiltration; Turnip mosaic virus; Virology; Cell biology; Capsid; Virus; Plant virus; Potyvirus; Nicotiana benthamiana; Coat protein; Biochemistry; Gene","score_opus":0.045156539395014274,"score_gpt":0.35517046226271426,"score_spread":0.31001392286769996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200009422","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99061924,0.0011688445,0.0068000234,0.00014347087,0.00043119027,0.00025372123,0.0002126379,0.00003191982,0.00033892857],"genre_scores_gemma":[0.3647352,0.0037566298,0.62754583,0.0024306788,0.0005506951,0.00032513638,0.0004281067,0.000014577864,0.00021317173],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968604,0.0014207932,0.0003785376,0.000609984,0.00015063686,0.000579654],"domain_scores_gemma":[0.99882674,0.00083770795,0.00005559373,0.00012562894,0.000042413816,0.000111918685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076596544,0.00021562097,0.0004289562,0.000070464666,0.00005500596,0.000035082106,0.0003461483,0.0001741643,0.000106699415],"category_scores_gemma":[0.0002457966,0.00011202056,0.00007612224,0.00054700696,0.00004485443,0.000035163743,0.0006922074,0.00033635012,0.00003549111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000336585,0.000091042704,0.0077538732,0.00000513596,0.000024625164,0.00029206913,0.00011217275,0.00004098519,0.9396002,0.000009724783,0.00001409439,0.05202236],"study_design_scores_gemma":[0.00017353053,0.00009459499,0.03073852,0.00006692846,0.000003354677,8.8300334e-7,0.00013674654,0.000037348247,0.9649075,0.0009755664,0.002655127,0.00020988047],"about_ca_topic_score_codex":0.0019083971,"about_ca_topic_score_gemma":0.00072811305,"teacher_disagreement_score":0.62588406,"about_ca_system_score_codex":0.000142057,"about_ca_system_score_gemma":0.000017814295,"threshold_uncertainty_score":0.4568066},"labels":[],"label_agreement":null},{"id":"W4200034348","doi":"10.1007/978-1-0716-1944-5_14","title":"An Imaging Flow Cytometry Protocol for Studying Immunoregulatory Receptor-Mediated Regulation of Phagocytosis","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Flow cytometry; Phagocytosis; Cytometry; Receptor; Protocol (science); Innate immune system; Computational biology; Immune system; Cell biology; Biology; Computer science; Immunology; Medicine; Pathology; Biochemistry","score_opus":0.031763489109409807,"score_gpt":0.407438029130966,"score_spread":0.3756745400215562,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200034348","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04010613,0.0014829796,0.93358266,0.00010982293,0.0005356714,0.023925668,0.000050704602,0.00008166102,0.00012471914],"genre_scores_gemma":[0.19798511,0.000011048057,0.75283563,0.0001752583,0.000051065155,0.047560744,0.0011994303,0.000082026825,0.0000996767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950905,0.0029336184,0.0008601324,0.0006123374,0.0000457819,0.00045762645],"domain_scores_gemma":[0.9981599,0.00046268041,0.00037781897,0.00065872574,0.00031487903,0.000025990445],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002115703,0.00027478265,0.0006557509,0.00040204887,0.00011980467,0.000014263274,0.0002909773,0.00040876266,0.00028459672],"category_scores_gemma":[0.00060284836,0.00027342906,0.00020701613,0.0006100871,0.00024932824,0.0001312117,0.00011999712,0.0002457482,0.000007492021],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002688556,0.0002927148,0.0051436946,0.0000607666,0.00012062798,0.0000012005053,0.00015653031,0.000102835715,0.9184598,0.00078064436,0.000039981718,0.07457236],"study_design_scores_gemma":[0.0035367256,0.00023205609,0.012092926,0.000067275956,0.000029787652,0.000018101977,0.00016864079,0.0012143081,0.97369987,0.0014386863,0.007225594,0.0002760214],"about_ca_topic_score_codex":0.00002333329,"about_ca_topic_score_gemma":0.0000031692184,"teacher_disagreement_score":0.18074702,"about_ca_system_score_codex":0.0001090545,"about_ca_system_score_gemma":0.00015079963,"threshold_uncertainty_score":0.9999718},"labels":[],"label_agreement":null},{"id":"W4200074126","doi":"10.1007/978-1-0716-1944-5_17","title":"Fetal Thymic Organ Culture (FTOC) Optimized for Gamma-Delta T Cell Studies","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Health Science Centre","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Context (archaeology); Biology; Fetus; Progenitor cell; Thymocyte; Haematopoiesis; Bone marrow; T cell; T-cell receptor; Immunology; Cell biology; Internal medicine; Andrology; Stem cell; Medicine; Immune system; Pregnancy; Genetics","score_opus":0.027323898285013925,"score_gpt":0.35841481640469575,"score_spread":0.33109091811968183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200074126","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.101984486,0.13505578,0.7542826,0.0011312932,0.0042877374,0.0010716337,0.00010772794,0.00019417239,0.001884568],"genre_scores_gemma":[0.038031664,0.0026228137,0.9463107,0.0014587125,0.00008043429,0.0003398426,0.0007742793,0.00008533667,0.0102962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99462914,0.0029292197,0.000646891,0.00092073047,0.00002438022,0.00084962],"domain_scores_gemma":[0.99814045,0.0007131865,0.00020475539,0.0006482342,0.00026238884,0.00003096657],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010704615,0.00043674378,0.001058733,0.00018327382,0.00019588279,0.0000136419585,0.00047350887,0.0010019906,0.00025503626],"category_scores_gemma":[0.0009500609,0.00036773892,0.00033469388,0.00035854755,0.0005918694,0.000035161596,0.00042270182,0.00066487165,0.00009539194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023289815,0.00023480544,0.00017391753,0.000052642656,0.00043124927,0.00006801932,0.00049882295,0.000023459686,0.990942,0.0016943907,0.0008415578,0.0048062555],"study_design_scores_gemma":[0.00423962,0.00037998066,0.0000089581135,0.00002062216,0.00012344445,0.00016656541,0.0012765022,0.000013875948,0.91883975,0.006277082,0.06825424,0.00039935764],"about_ca_topic_score_codex":0.000024675226,"about_ca_topic_score_gemma":0.000018978115,"teacher_disagreement_score":0.19202812,"about_ca_system_score_codex":0.00007447904,"about_ca_system_score_gemma":0.00014580846,"threshold_uncertainty_score":0.99987745},"labels":[],"label_agreement":null},{"id":"W4200090878","doi":"10.1007/978-1-0716-1839-4_5","title":"Improving Analysis and Annotation of Microarray Data with Protein Interactions","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research Canada; University of Toronto; University Health Network","funders":"","keywords":"Microarray analysis techniques; Identification (biology); Microarray; Computational biology; Protein microarray; Annotation; Prioritization; DNA microarray; Gene; Gene chip analysis; Microarray databases; Biology; Computer science; Bioinformatics; Gene expression; Genetics; Engineering","score_opus":0.015119584706556949,"score_gpt":0.3497832157989055,"score_spread":0.33466363109234853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200090878","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15573879,0.00057364156,0.84333533,0.000059284073,0.000026889033,0.00009258748,0.000025582885,0.000002134091,0.0001457558],"genre_scores_gemma":[0.15131204,0.000027142927,0.84794825,0.000091912596,0.000016789347,0.0000107373835,0.00052372937,0.0000079652345,0.00006142653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989823,0.0002884885,0.00024831353,0.00031732366,0.000027914146,0.00013565678],"domain_scores_gemma":[0.99919736,0.00002354314,0.00013097895,0.000545292,0.000074087606,0.000028736624],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005010541,0.000096233525,0.00019974037,0.00009839689,0.000022284386,0.000010927012,0.00014841124,0.00010582042,0.0000069829503],"category_scores_gemma":[0.0001357454,0.000085734915,0.000037780836,0.00031208075,0.00009012422,0.000004004623,0.00024989867,0.00009693602,1.58699e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002665614,0.000021236016,0.002110242,0.00001791026,0.0002109352,0.0000027608382,0.00002972309,0.00009784971,0.96293724,0.00020019703,0.000004425532,0.034340855],"study_design_scores_gemma":[0.0004316553,0.0001375056,0.0010000959,0.00001421963,0.00016520829,0.000025755102,0.00011390499,0.0062295957,0.98910826,0.0009624622,0.0016305018,0.0001808458],"about_ca_topic_score_codex":0.000049599654,"about_ca_topic_score_gemma":0.0003197591,"teacher_disagreement_score":0.03416001,"about_ca_system_score_codex":0.0000053068175,"about_ca_system_score_gemma":0.00005894741,"threshold_uncertainty_score":0.34961686},"labels":[],"label_agreement":null},{"id":"W4200122716","doi":"10.1007/978-1-0716-1839-4_12","title":"geneExpressionFromGEO: An R Package to Facilitate Data Reading from Gene Expression Omnibus (GEO)","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Bioconductor; Software; Computer science; R package; Expression (computer science); Gene expression profiling; Gene expression; Computational biology; Software package; Gene; Data mining; Bioinformatics; Biology; Genetics; Operating system; Programming language","score_opus":0.10067053052814222,"score_gpt":0.418487442808173,"score_spread":0.3178169122800308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200122716","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20048547,0.0020752866,0.79590845,0.00022708604,0.0004381352,0.0002006355,0.00025869417,0.000026202848,0.00038006547],"genre_scores_gemma":[0.04751607,0.00032266608,0.9447238,0.001375221,0.00021944068,0.00010333405,0.0051945597,0.000054897377,0.0004900073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950001,0.0022313688,0.000489372,0.0016629111,0.00014926416,0.0004669493],"domain_scores_gemma":[0.99658686,0.000060314098,0.00012620853,0.0028384256,0.00012759444,0.00026059084],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010090079,0.0003041263,0.00035802939,0.00013576614,0.00009387522,0.000043235807,0.0008787942,0.00047442628,0.00014571352],"category_scores_gemma":[0.00091881433,0.00029379615,0.000082197104,0.00032556098,0.00007247787,0.000013226485,0.0011840338,0.00023594964,0.000019138906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088073386,0.000088841145,0.0010891715,0.0000063647344,0.000024939096,0.000029639697,0.00013217264,0.000104913735,0.9728073,0.00004995469,0.0008886412,0.024690023],"study_design_scores_gemma":[0.0004972859,0.00010939433,0.0010698346,0.000033281252,0.00001362979,0.00000901308,0.0002044068,0.00017083967,0.9183202,0.0011348309,0.07809592,0.00034140202],"about_ca_topic_score_codex":0.000083150146,"about_ca_topic_score_gemma":0.00003388273,"teacher_disagreement_score":0.15296939,"about_ca_system_score_codex":0.000031723142,"about_ca_system_score_gemma":0.00015521853,"threshold_uncertainty_score":0.9999514},"labels":[],"label_agreement":null},{"id":"W4200155616","doi":"10.1007/978-1-0716-1948-3_4","title":"Tissue Processing","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"London Health Sciences Centre; Western University","funders":"","keywords":"Computer science; Process engineering; Engineering","score_opus":0.031215619241161598,"score_gpt":0.45224517523437147,"score_spread":0.42102955599320985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200155616","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005561743,0.0027312723,0.9830336,0.00017240697,0.00019514903,0.000048053913,6.6650676e-7,0.00009398498,0.008163102],"genre_scores_gemma":[0.019312331,0.00005485605,0.9803424,0.00010779682,0.00003186939,0.000018297447,0.0000057151306,0.000021810509,0.0001049355],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987955,0.00045570618,0.00017096358,0.00019855214,0.00006878153,0.00031051217],"domain_scores_gemma":[0.99953765,0.00015914759,0.000009192536,0.00019999429,0.00003681605,0.000057221383],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009016853,0.00008320654,0.00015728454,0.00009812531,0.000015185931,0.000013882611,0.00016316402,0.00015930875,0.00014034499],"category_scores_gemma":[0.0010719537,0.00008409138,0.000023756455,0.0004412484,0.00007935823,0.00001223462,0.00010923485,0.00029497317,0.000020419078],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[4.5518422e-7,0.000005380339,0.0001599834,0.00003124388,0.000004374296,0.0000699792,0.000019150259,0.00009588435,0.6276188,0.00052167947,0.000014691655,0.3714584],"study_design_scores_gemma":[0.000110937806,0.0000120299765,0.00022455477,0.000020627947,0.0000019905517,0.000019363524,0.000011917977,0.005492693,0.94849473,0.007680454,0.037825547,0.00010514529],"about_ca_topic_score_codex":0.000003851429,"about_ca_topic_score_gemma":0.000002131157,"teacher_disagreement_score":0.37135327,"about_ca_system_score_codex":0.000037969283,"about_ca_system_score_gemma":0.000041405347,"threshold_uncertainty_score":0.3429147},"labels":[],"label_agreement":null},{"id":"W4200191281","doi":"10.1007/978-1-0716-1835-6_5","title":"Isolation and Transfection of Plant Mesophyll Protoplasts for Virology Research","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"Protoplast; Nicotiana benthamiana; Biology; Virology; Potyvirus; Plant cell; Arabidopsis thaliana; Virus; Transfection; Plant virus; RNA; Cell biology; Cell culture; Gene; Botany; Genetics; Mutant","score_opus":0.10543924622746013,"score_gpt":0.4499214784132978,"score_spread":0.3444822321858377,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200191281","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8906087,0.0013518599,0.10499938,0.001342178,0.000087726316,0.0010759743,0.00032484092,0.000014480926,0.00019480613],"genre_scores_gemma":[0.44933835,0.001127958,0.5474447,0.00022019498,0.00015242644,0.0011739639,0.00043889144,0.0000040246796,0.00009950166],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99735224,0.0018619525,0.0001755531,0.00027913047,0.000070953225,0.00026015626],"domain_scores_gemma":[0.9981681,0.0016328264,0.000027335476,0.000039081307,0.00010360963,0.000029056026],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020519777,0.00006834284,0.00020551177,0.000042562046,0.00007449056,0.0000063231514,0.00008043997,0.00014114993,0.000015547384],"category_scores_gemma":[0.00094469707,0.000030858813,0.000039580966,0.00030572005,0.00016059405,0.000016820093,0.00007500421,0.00015159551,3.9286883e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010194986,0.000035686488,0.0011923113,0.000018388659,0.000013176331,0.0000056744775,0.00004062066,0.000001673131,0.9696159,0.001655347,0.000012889847,0.027306393],"study_design_scores_gemma":[0.00025792222,0.0007694019,0.010914426,0.000012123574,0.000004101076,0.00001714062,0.00008560052,0.0003750375,0.96001446,0.021302493,0.0061691687,0.000078127276],"about_ca_topic_score_codex":0.00007773096,"about_ca_topic_score_gemma":0.00038833017,"teacher_disagreement_score":0.4424453,"about_ca_system_score_codex":0.000012831811,"about_ca_system_score_gemma":0.000012405738,"threshold_uncertainty_score":0.12583858},"labels":[],"label_agreement":null},{"id":"W4200194887","doi":"10.1007/978-1-0716-1839-4_10","title":"Pathway Enrichment Analysis of Microarray Data","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Discovery Centre; University Health Network; Toronto Western Hospital","funders":"","keywords":"Pathway analysis; Microarray analysis techniques; Computational biology; Microarray databases; Biological pathway; Protocol (science); Microarray; Computer science; Biology; Gene; Genetics; Gene expression; Medicine","score_opus":0.025383652006556116,"score_gpt":0.36714845787173633,"score_spread":0.3417648058651802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200194887","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.033659454,0.0039782147,0.9605028,0.00009803738,0.00017197235,0.00008787243,0.00011101802,0.0000038354183,0.0013868009],"genre_scores_gemma":[0.07995956,0.00029914506,0.916445,0.0006700936,0.000044052213,0.000010368739,0.0023924632,0.000015827374,0.0001634542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815995,0.00056194805,0.00047398836,0.0004844236,0.000055111603,0.00026458417],"domain_scores_gemma":[0.9983093,0.00004588507,0.00014891308,0.0013662286,0.00007864093,0.000051037317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011848256,0.0001500118,0.00039814753,0.00015116288,0.000020383815,0.000008581659,0.000497568,0.00026162498,0.000047136895],"category_scores_gemma":[0.00021315362,0.00014523638,0.0001537476,0.0005967971,0.00009966959,0.000001840133,0.0006866899,0.00011783007,0.0000013323203],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015190777,0.00006000159,0.0025507896,0.000010736378,0.00066761277,0.000008372729,0.00003166027,0.00036401776,0.9693534,0.0014573913,0.00008987306,0.025390996],"study_design_scores_gemma":[0.0005119072,0.00011887316,0.0012498013,0.000008056616,0.0003055153,0.000012218384,0.000097644064,0.0034794963,0.9434598,0.0021879266,0.048258826,0.00030991618],"about_ca_topic_score_codex":0.000018386683,"about_ca_topic_score_gemma":0.00006920988,"teacher_disagreement_score":0.048168954,"about_ca_system_score_codex":0.000010930176,"about_ca_system_score_gemma":0.00012609949,"threshold_uncertainty_score":0.5922567},"labels":[],"label_agreement":null},{"id":"W4200199063","doi":"10.1007/978-1-0716-1835-6_12","title":"Purification of Plasmodesmata-Enriched Fraction for Proteomic Analyses","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"Plasmodesma; Fraction (chemistry); Chemistry; Computational biology; Biology; Chromatography; Biochemistry; Cell","score_opus":0.06433044767414864,"score_gpt":0.4743038870183696,"score_spread":0.409973439344221,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200199063","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0700123,0.00018187918,0.9289551,0.00011108769,0.0000121693165,0.000200401,0.000030445059,0.000030866082,0.00046577983],"genre_scores_gemma":[0.03067064,0.00004846537,0.9682408,0.000032951597,0.000013334511,0.00076479476,0.00015782773,0.0000141275295,0.00005703708],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991544,0.00011254516,0.0002974472,0.00028148355,0.000028368288,0.00012576014],"domain_scores_gemma":[0.9992016,0.00014428065,0.00017655652,0.00035597457,0.00010334161,0.000018275388],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029520784,0.000088499466,0.00022001943,0.000057429585,0.00002683822,0.00000413118,0.000121678444,0.0001840146,0.000046544923],"category_scores_gemma":[0.00040025642,0.000092109396,0.00008302849,0.00017745569,0.000047271198,0.000019842695,0.000036710026,0.00012348786,4.1482045e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018308097,0.000049966762,0.00020178121,0.000044104538,0.0000177467,5.1727454e-7,0.000008396229,0.00012539784,0.97765344,0.013486104,0.0000029976388,0.008391211],"study_design_scores_gemma":[0.00016897205,0.000011571708,0.000024126359,0.000007392237,0.000016619933,0.0000031071165,0.000020891592,0.001642025,0.8818523,0.11504325,0.0011319362,0.00007778121],"about_ca_topic_score_codex":0.000011643719,"about_ca_topic_score_gemma":0.0000011928046,"teacher_disagreement_score":0.10155714,"about_ca_system_score_codex":0.000042218606,"about_ca_system_score_gemma":0.00004186868,"threshold_uncertainty_score":0.37561122},"labels":[],"label_agreement":null},{"id":"W4200245575","doi":"10.1007/978-1-0716-1835-6_8","title":"Simultaneous Determination and Subcellular Localization of Protein–Protein Interactions in Plant Cells Using Bimolecular Fluorescence Complementation Assay","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"Bimolecular fluorescence complementation; Subcellular localization; Protein–protein interaction; Protein subcellular localization prediction; Protein-fragment complementation assay; Green fluorescent protein; Fluorescence; Fluorescent protein; Complementation; Cell biology; Chemistry; Yellow fluorescent protein; Biology; Computational biology; Biochemistry; Biophysics; Cytoplasm; Gene","score_opus":0.022204276510935837,"score_gpt":0.3644701677586138,"score_spread":0.342265891247678,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200245575","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37842196,0.00023239301,0.621002,0.0000121014,0.000046874964,0.0002505264,0.000014545184,0.000003197677,0.000016341915],"genre_scores_gemma":[0.68105817,0.000039206858,0.31866318,0.00004721745,0.000008653606,0.000031434833,0.00012758741,0.000014608627,0.000009964389],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979534,0.0009065291,0.00040415255,0.00043554493,0.00007834043,0.0002219929],"domain_scores_gemma":[0.9994003,0.00005008634,0.00016110876,0.00023027854,0.00011717705,0.000041033985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063996867,0.00015986625,0.00023356735,0.00014516455,0.000034795605,0.000011887015,0.00010880682,0.00014150135,0.000010843858],"category_scores_gemma":[0.0004900557,0.00017570212,0.00004659771,0.00024600132,0.0000799795,0.000005963186,0.00012529189,0.000111304,2.604456e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042202206,0.00008425697,0.00017040755,0.00007140035,0.000010853798,0.00005256037,0.0000544337,0.0015785432,0.991744,0.00041093092,8.264029e-8,0.0057803197],"study_design_scores_gemma":[0.00041027644,0.00011242253,0.0000059210024,0.00008648189,0.000012752442,0.000034958055,0.00007945238,0.07362471,0.9231991,0.001999692,0.00027386486,0.00016036592],"about_ca_topic_score_codex":0.000098322314,"about_ca_topic_score_gemma":0.00010180394,"teacher_disagreement_score":0.30263618,"about_ca_system_score_codex":0.000034175533,"about_ca_system_score_gemma":0.00008923473,"threshold_uncertainty_score":0.7164925},"labels":[],"label_agreement":null},{"id":"W4200258132","doi":"10.1007/978-1-0716-1936-0_11","title":"Generation of HLA Allele-Specific Spectral Libraries to Identify and Quantify Immunopeptidomes by SWATH/DIA-MS","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"","keywords":"Workflow; Human leukocyte antigen; Computer science; Context (archaeology); Computational biology; Biology; Antigen; Immunology; Database","score_opus":0.04589238318239013,"score_gpt":0.36543072350827516,"score_spread":0.319538340325885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200258132","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.596605,0.014686566,0.38776952,0.0002234035,0.00013988923,0.00015968905,0.000018434714,0.000006084033,0.00039138543],"genre_scores_gemma":[0.19853751,0.0024943002,0.7974462,0.00040138737,0.0000890547,0.000041150906,0.0007314068,0.000036432684,0.00022253621],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827254,0.00045655423,0.00050284894,0.00041003842,0.00006554935,0.0002924663],"domain_scores_gemma":[0.99925214,0.000033943354,0.00011749223,0.0004610779,0.0000765289,0.00005883087],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005960815,0.0002084836,0.00035268744,0.000094872164,0.00004825307,0.00005292775,0.00021695938,0.0002581703,0.000026397845],"category_scores_gemma":[0.00021496635,0.00020143142,0.000098761506,0.00021358753,0.00009835086,0.000010111567,0.0003228808,0.00013092408,0.000002305469],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003930672,0.00005126376,0.0007601905,0.000022750031,0.00006603715,0.0000035165506,0.00014044183,0.000030886953,0.9871791,0.0033672953,0.0007632266,0.007575979],"study_design_scores_gemma":[0.00046204348,0.0002271162,0.0012563958,0.000008896415,0.000011018424,0.000028042627,0.00017640892,0.00011761516,0.9686504,0.00078435685,0.028052043,0.0002256637],"about_ca_topic_score_codex":0.000019009938,"about_ca_topic_score_gemma":0.0000096730355,"teacher_disagreement_score":0.4096767,"about_ca_system_score_codex":0.0000095845235,"about_ca_system_score_gemma":0.000055214987,"threshold_uncertainty_score":0.82141346},"labels":[],"label_agreement":null},{"id":"W4200292116","doi":"10.1007/978-1-0716-1835-6_1","title":"In Vivo Detection of Double-Stranded RNA by dRBFC Assay","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"RNA silencing; RNA; Biology; Virology; Innate immune system; Gene silencing; Cell biology; RNA-induced silencing complex; Viral replication; Virus; In vivo; RNA interference; Computational biology; Immune system; Genetics; Gene","score_opus":0.04705949868926651,"score_gpt":0.3869610744565184,"score_spread":0.3399015757672519,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200292116","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96961105,0.0016712435,0.025721857,0.0009799212,0.00015684574,0.00021348623,0.00012207431,0.000017635202,0.0015058694],"genre_scores_gemma":[0.9306965,0.00096193317,0.06724178,0.00041498427,0.00006223201,0.00009186921,0.00006876995,0.0000025174568,0.000459419],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976951,0.0014274381,0.00023847423,0.0002818202,0.00008391648,0.00027325764],"domain_scores_gemma":[0.9993002,0.00051243056,0.00005104457,0.00005463831,0.000048443777,0.000033270673],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012698993,0.000097727105,0.00026735902,0.00003017726,0.00003024324,0.000007130119,0.00015626155,0.00015521453,0.00013115405],"category_scores_gemma":[0.00042768347,0.00004355216,0.00006243015,0.0005354242,0.00009508822,0.000024834319,0.00010705062,0.00017949994,0.0000017408943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005456421,0.000051870105,0.00048674154,0.000004750616,0.000012238086,0.000028234146,0.000016725538,0.00000234335,0.9690117,0.00013329339,0.000036235742,0.030161291],"study_design_scores_gemma":[0.00031005905,0.000094652976,0.0007338167,0.000007314526,0.000002534138,0.00000498202,0.00005389968,0.000029374027,0.9871906,0.0026420772,0.008844506,0.000086183194],"about_ca_topic_score_codex":0.00048731844,"about_ca_topic_score_gemma":0.0014540831,"teacher_disagreement_score":0.041519925,"about_ca_system_score_codex":0.000026196005,"about_ca_system_score_gemma":0.000009303119,"threshold_uncertainty_score":0.17760056},"labels":[],"label_agreement":null},{"id":"W4200313048","doi":"10.1007/978-1-0716-2030-4_7","title":"Metal-Assisted Laser Desorption Ionization Imaging Mass Spectrometry","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Mass spectrometry; Mass spectrometry imaging; Ionization; Metal; Materials science; Laser; Atmospheric-pressure laser ionization; Desorption; Analytical Chemistry (journal); Chemistry; Optics; Physics; Ion; Photoionization; Environmental chemistry; Chromatography; Metallurgy; Adsorption","score_opus":0.01709536458419168,"score_gpt":0.3612235836449898,"score_spread":0.3441282190607981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200313048","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01313675,0.00063338183,0.96511316,0.00041122435,0.000054380267,0.000065349785,0.000010176128,0.00014958758,0.020426001],"genre_scores_gemma":[0.11606426,0.00008438032,0.8829255,0.0001932091,0.00004196106,0.00007734682,0.00018319213,0.000028419357,0.00040169968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842095,0.00034808414,0.0003401828,0.0005020286,0.000082523584,0.00030621755],"domain_scores_gemma":[0.9991021,0.00012366693,0.000115503935,0.00051827985,0.00008733125,0.00005309538],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.000509681,0.00017199965,0.00026858563,0.00020411107,0.000056359997,0.000029013743,0.00019288724,0.0001834309,0.0032014924],"category_scores_gemma":[0.0003450409,0.00018450465,0.000115859664,0.0010653086,0.0000627919,0.000034183897,0.000095861,0.00028202435,0.000009435808],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038401663,0.000068517664,0.003303416,0.000019503263,0.000022489294,0.00003567251,0.000006182276,0.000008472822,0.95437676,0.030051159,0.000013436908,0.012090575],"study_design_scores_gemma":[0.00021764741,0.000007658814,0.0003636554,0.000011758103,0.000026910337,0.000050765517,0.00003561699,0.00082590914,0.93216705,0.062476344,0.0036320463,0.00018464631],"about_ca_topic_score_codex":0.00001592572,"about_ca_topic_score_gemma":0.0000039474644,"teacher_disagreement_score":0.102927506,"about_ca_system_score_codex":0.00014124601,"about_ca_system_score_gemma":0.00004196377,"threshold_uncertainty_score":0.9977097},"labels":[],"label_agreement":null},{"id":"W4200355881","doi":"10.1007/978-1-0716-1835-6_20","title":"Biolistic Inoculation of Fruit Trees with Full-Length Infectious cDNA Clones of RNA Viruses","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Inoculation; Virology; Complementary DNA; cDNA library; RNA; Plant virus; Gene; Virus; Genetics; Horticulture","score_opus":0.05502013375339925,"score_gpt":0.3831277834929085,"score_spread":0.32810764973950923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200355881","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9846,0.0011901219,0.013389673,0.00010769914,0.00005082949,0.00013732337,0.00010134644,0.000017104672,0.00040589253],"genre_scores_gemma":[0.9296072,0.00034724988,0.069842376,0.00007676333,0.000031718693,0.000024012188,0.00005605088,0.0000016417561,0.00001295024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978841,0.001183098,0.00030201758,0.0002811684,0.000113931,0.00023567176],"domain_scores_gemma":[0.9986851,0.0008969407,0.00014137283,0.00008678953,0.00015465615,0.00003513192],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006056394,0.00013123114,0.00039228983,0.000050648287,0.00004374626,0.000006700691,0.00015612655,0.00012258494,0.000056642195],"category_scores_gemma":[0.0010435034,0.000053152886,0.00007251447,0.00062993076,0.00025025284,0.000026400523,0.00013928868,0.000121610086,0.0000012323835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005722899,0.00007825423,0.021388203,0.000015448148,0.000054418662,0.000016925298,0.000037618567,0.000033771626,0.943905,0.0010701602,0.000003779106,0.033339184],"study_design_scores_gemma":[0.0002152886,0.0005512123,0.053136,0.00003514019,0.00001866795,0.000014829725,0.000108483124,0.000070138994,0.9414511,0.0034248666,0.00083698827,0.00013728582],"about_ca_topic_score_codex":0.000509864,"about_ca_topic_score_gemma":0.0017923628,"teacher_disagreement_score":0.056452703,"about_ca_system_score_codex":0.000016616848,"about_ca_system_score_gemma":0.000021519272,"threshold_uncertainty_score":0.21675117},"labels":[],"label_agreement":null},{"id":"W4200375613","doi":"10.1007/978-1-0716-1908-7_13","title":"Mapping Chromatin Accessibility in Human Naïve Pluripotent Stem Cells Using ATAC-Seq","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"Canadian Institutes of Health Research","keywords":"Chromatin; Enhancer; ChIA-PET; Induced pluripotent stem cell; Nucleosome; Transcription factor; Computational biology; Promoter; Biology; Cell biology; Genetics; Gene; Gene expression; Embryonic stem cell","score_opus":0.030540317884061065,"score_gpt":0.36943688016531706,"score_spread":0.338896562281256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200375613","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6712252,0.0009194468,0.32724607,0.00003046752,0.00018320608,0.0001688088,0.000013961074,0.000007731321,0.00020510438],"genre_scores_gemma":[0.52381504,0.0000648353,0.47560266,0.00022771028,0.00004992737,0.000023153909,0.000100113415,0.00003589349,0.00008065855],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963876,0.0014303646,0.0006961158,0.0008844908,0.00008237893,0.00051903084],"domain_scores_gemma":[0.99882054,0.000039859584,0.00019568055,0.0007812007,0.00008373234,0.00007898434],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013286255,0.0002892964,0.00045542314,0.00014618,0.00007122948,0.000034424043,0.00040117968,0.00044398155,0.000026241643],"category_scores_gemma":[0.00010190745,0.00031575028,0.00016095149,0.00029020992,0.00012545171,0.0000039905008,0.0006045953,0.00027103198,0.0000017874945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009311422,0.00010025921,0.006807913,0.00005343831,0.000035501445,0.00007324714,0.00009239302,0.0009608054,0.9871943,0.00019798566,0.0000028497718,0.004471986],"study_design_scores_gemma":[0.0007230322,0.0000684215,0.0033090627,0.000039491628,0.000009727107,0.000036465757,0.00025505573,0.00465762,0.9874706,0.0025195733,0.0005417301,0.00036920793],"about_ca_topic_score_codex":0.000060325245,"about_ca_topic_score_gemma":0.000094492105,"teacher_disagreement_score":0.1483566,"about_ca_system_score_codex":0.00012444971,"about_ca_system_score_gemma":0.00016850577,"threshold_uncertainty_score":0.9999294},"labels":[],"label_agreement":null},{"id":"W4200376641","doi":"10.1007/978-1-0716-1835-6_11","title":"Tag-Based Pull-Down Assay","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Nicotiana benthamiana; Biology; Protein–protein interaction; Agarose; Obligate; In silico; Computational biology; Cell biology; Biochemistry; Virology; Botany; Virus; Gene","score_opus":0.05856223662902836,"score_gpt":0.40494396801527943,"score_spread":0.34638173138625106,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200376641","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5728146,0.009661294,0.37528518,0.023621751,0.0010454261,0.0009614879,0.000771346,0.00031627223,0.015522655],"genre_scores_gemma":[0.074857354,0.0003568342,0.91865015,0.004451721,0.0001960813,0.00016238111,0.00055529387,0.0000038257094,0.00076637365],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99622595,0.0026343216,0.00019855492,0.00040595751,0.0001051325,0.00043006995],"domain_scores_gemma":[0.99853855,0.0011829541,0.000040794508,0.000089214496,0.00008060237,0.00006789368],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015055947,0.00013333309,0.00026604088,0.000023974186,0.000080891296,0.000021915508,0.0002570126,0.00015404749,0.00038880715],"category_scores_gemma":[0.002002369,0.00005311176,0.00009823823,0.00053619297,0.00012372607,0.000016261845,0.00018687444,0.0002252427,0.000025241427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001058629,0.00004821212,0.0018911447,0.0000030056826,0.000013259825,0.00012354566,0.0000052830915,0.000006816082,0.92468315,0.00071163767,0.00016858493,0.072334744],"study_design_scores_gemma":[0.00018047949,0.00012577137,0.006332959,0.000011466487,0.000005596601,0.00001175508,0.000055064018,0.0003293542,0.8898727,0.0044603357,0.09840606,0.00020844402],"about_ca_topic_score_codex":0.00011993278,"about_ca_topic_score_gemma":0.00035719736,"teacher_disagreement_score":0.54336494,"about_ca_system_score_codex":0.000029482111,"about_ca_system_score_gemma":0.000025134379,"threshold_uncertainty_score":0.42571655},"labels":[],"label_agreement":null},{"id":"W4200402629","doi":"10.1007/978-1-0716-1892-9_12","title":"Generation of a Liposomal Vaccine Adjuvant Based on Sulfated S-Lactosylarchaeol (SLA) Glycolipids","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immunotherapy and Immune Responses","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Adjuvant; Glycolipid; Liposome; Antigen; Sonication; Immune system; Vesicle; Chemistry; Biochemistry; Biology; Immunology; Chromatography; Membrane","score_opus":0.031366914327603634,"score_gpt":0.3614327772391349,"score_spread":0.3300658629115313,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200402629","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5080177,0.010858072,0.4787278,0.00058839703,0.0010633044,0.0003132362,0.00003028465,0.00004370189,0.0003574815],"genre_scores_gemma":[0.8013699,0.00029535757,0.19541062,0.001511939,0.00004290394,0.000088078756,0.000575694,0.000054619544,0.0006508866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9929081,0.0055991015,0.00058630883,0.00045584366,0.000033583023,0.00041703635],"domain_scores_gemma":[0.9985108,0.0005580933,0.00017212715,0.0006006506,0.00014211744,0.000016256541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010809567,0.0002504002,0.00061360863,0.0003313724,0.00006949749,0.0000051568877,0.00024324062,0.0005199991,0.00064682396],"category_scores_gemma":[0.0009027605,0.00022829931,0.00018613916,0.00045193444,0.00017989232,0.000024530593,0.000095504474,0.0004049923,0.000022092503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011732007,0.00028445857,0.0009422509,0.00001550972,0.00012934956,0.000034003035,0.00012524248,0.00014079544,0.96609396,0.0018332658,0.000031154108,0.029196791],"study_design_scores_gemma":[0.0032178697,0.00087903644,0.002528444,0.000040725725,0.00002739764,0.000051443734,0.000036397952,0.00044914553,0.9832571,0.00035647015,0.008936191,0.00021976745],"about_ca_topic_score_codex":0.00006499161,"about_ca_topic_score_gemma":0.000026907985,"teacher_disagreement_score":0.29335216,"about_ca_system_score_codex":0.000045391356,"about_ca_system_score_gemma":0.00020173605,"threshold_uncertainty_score":0.9309775},"labels":[],"label_agreement":null},{"id":"W4200438774","doi":"10.1007/978-1-0716-1835-6_13","title":"Purification and Proteomics Analysis of Phloem Tissues from Virus-Infected Plants","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"","keywords":"Phloem; Biology; Proteomics; Virus; Host (biology); Transcriptome; Plant virus; Quantitative proteomics; Virology; Cell biology; Computational biology; Gene; Botany; Gene expression; Genetics","score_opus":0.0509671851229649,"score_gpt":0.3888587358973166,"score_spread":0.33789155077435173,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200438774","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98521054,0.0016904005,0.012129428,0.00019640027,0.000022516691,0.00011912645,0.0005354371,0.000012467878,0.000083675375],"genre_scores_gemma":[0.3413141,0.0035993552,0.65287334,0.00019626359,0.00005184973,0.00008025446,0.0018298425,0.0000021024023,0.000052907693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981699,0.0010853799,0.00020702419,0.00030306895,0.000066612774,0.0001680108],"domain_scores_gemma":[0.9991493,0.00061569846,0.00007374216,0.00007023869,0.000057276433,0.000033737062],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048406504,0.00008780227,0.00033873052,0.000051147203,0.000037140257,0.000011362431,0.00011809177,0.00011392659,0.00008124755],"category_scores_gemma":[0.0006269172,0.00003950017,0.00005675413,0.00068341097,0.00009971259,0.00001713376,0.00012972127,0.00009565636,0.0000012072592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017328197,0.00003560428,0.01327111,0.0000019763831,0.00019751475,0.00001096689,0.00004840683,0.0000037411714,0.95554405,0.00012254107,0.000004236282,0.030742515],"study_design_scores_gemma":[0.00006361631,0.000046307847,0.1297246,0.0000053214694,0.000050523853,9.484924e-7,0.000058776484,0.000325269,0.8668346,0.0017787105,0.0010335426,0.00007778129],"about_ca_topic_score_codex":0.00093961897,"about_ca_topic_score_gemma":0.0015132978,"teacher_disagreement_score":0.64389646,"about_ca_system_score_codex":0.0000110105275,"about_ca_system_score_gemma":0.0000072290236,"threshold_uncertainty_score":0.16107701},"labels":[],"label_agreement":null},{"id":"W4200442309","doi":"10.1007/978-1-0716-1835-6_4","title":"Transient Expression–Mediated Gene Silencing in Plants and Suppression of Gene Silencing with Viral Suppressors","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"RNA silencing; Trans-acting siRNA; Gene silencing; RNA-induced silencing complex; Biology; Nicotiana benthamiana; RNA-induced transcriptional silencing; RNA interference; RNA; Small interfering RNA; Genetics; Argonaute; Cell biology; Gene","score_opus":0.03285773429468639,"score_gpt":0.33724678275118636,"score_spread":0.30438904845649994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200442309","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938133,0.0022794215,0.0033184895,0.00012409703,0.00005225726,0.00016484865,0.00018342113,0.000013248122,0.0000509206],"genre_scores_gemma":[0.9179624,0.00068628584,0.081068344,0.000077473036,0.000019697707,0.00003397309,0.000140748,0.0000023107539,0.000008801582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99712694,0.001476512,0.0003317798,0.00047633328,0.0001610563,0.0004273808],"domain_scores_gemma":[0.99884105,0.000867267,0.00008115162,0.00008624055,0.00004791612,0.00007636064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007636828,0.00017456965,0.00042497882,0.000060491,0.00006164872,0.000010335272,0.00018397864,0.00016859615,0.000042337695],"category_scores_gemma":[0.0003834721,0.000073043746,0.000041740423,0.00032531485,0.00015490888,0.00004268641,0.0001731131,0.00023722513,4.906549e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000113481634,0.00006656152,0.004476048,0.00001555855,0.000013698508,0.00019738337,0.0005001488,0.00006584365,0.9883386,0.000005187731,0.000006404044,0.006201074],"study_design_scores_gemma":[0.00038769055,0.00019977764,0.022773037,0.00010851336,0.0000038193857,0.000027286998,0.0005723114,0.00023469847,0.9752934,0.00016929672,0.00007938681,0.00015079038],"about_ca_topic_score_codex":0.00027940495,"about_ca_topic_score_gemma":0.00030560343,"teacher_disagreement_score":0.07774985,"about_ca_system_score_codex":0.000023542056,"about_ca_system_score_gemma":0.000021749736,"threshold_uncertainty_score":0.29786375},"labels":[],"label_agreement":null},{"id":"W4200459118","doi":"10.1007/978-1-0716-1847-9_12","title":"Histological Techniques for Sectioning Bones of the Vertebrate Craniofacial Skeleton","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Comparative Animal Anatomy Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Anatomy; Craniofacial; Biology; Cartilage; Stromal cell; Pathology; Medicine","score_opus":0.05063794451037266,"score_gpt":0.44248021450819397,"score_spread":0.3918422699978213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200459118","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1770902,0.0013221613,0.8182139,0.0017004111,0.00019471943,0.00032885777,0.0000034484942,0.000026636722,0.001119665],"genre_scores_gemma":[0.21829353,0.00003164908,0.7808,0.0006115508,0.000036721773,0.00008107887,0.0000034158772,0.000007844574,0.00013422055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99887407,0.000525726,0.00021458525,0.00020933809,0.000039589806,0.00013671872],"domain_scores_gemma":[0.9994537,0.00018242247,0.00006566713,0.00014727094,0.00013592918,0.000015006635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003960491,0.000087724686,0.00035472188,0.000047633926,0.00005005483,0.0000017822848,0.00006477623,0.00010432435,0.000020533687],"category_scores_gemma":[0.0011163056,0.000058829213,0.00014113165,0.00022311449,0.00018694409,0.000006278406,0.00010609667,0.00014038652,3.0834872e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006650384,0.00005618271,0.023325168,0.000027984499,0.000050394126,0.000011763742,0.000076229815,7.5120374e-7,0.95791304,0.009920232,0.000083189996,0.008468581],"study_design_scores_gemma":[0.0003715392,0.00028163122,0.014603269,0.000029405894,0.000045167082,0.00003805604,0.00009071883,0.00013570399,0.95215607,0.012624613,0.0195472,0.00007664225],"about_ca_topic_score_codex":0.000017926492,"about_ca_topic_score_gemma":0.000026230828,"teacher_disagreement_score":0.041203342,"about_ca_system_score_codex":0.00003950298,"about_ca_system_score_gemma":0.000056137866,"threshold_uncertainty_score":0.23989858},"labels":[],"label_agreement":null},{"id":"W4200463876","doi":"10.1007/978-1-0716-1884-4_14","title":"Generation of CpG-Recoded Zika Virus Vaccine Candidates","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Zika virus; Virology; Biology; CpG site; Virus; Genome; Cytosine; DNA; Genetics; Gene; DNA methylation; Gene expression","score_opus":0.034876551266456175,"score_gpt":0.4146938904621444,"score_spread":0.3798173391956882,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200463876","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26419201,0.0076090684,0.72651285,0.00073772337,0.00022810347,0.00019388257,0.000020942676,0.000014736706,0.0004906585],"genre_scores_gemma":[0.30341625,0.0003096968,0.6930866,0.0022915045,0.00017386582,0.00009760308,0.00031207828,0.000027511174,0.0002848585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845856,0.0006779103,0.00032456958,0.00029372767,0.000056644178,0.00018858597],"domain_scores_gemma":[0.99931806,0.00008003017,0.00007676971,0.0003429784,0.00011641404,0.00006574359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042768772,0.00011209192,0.00042628282,0.00009236348,0.000015667734,0.000004284747,0.00006451125,0.00013246771,0.00041580643],"category_scores_gemma":[0.00060782826,0.00009808375,0.00014648536,0.00021670079,0.000025600753,0.000010702444,0.00004803386,0.00010911363,0.0000036103233],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010544693,0.00010763046,0.0052475487,0.000026718237,0.00008948088,0.000093172195,0.000020946787,0.000017605807,0.95326316,0.0023861267,0.0000986649,0.038543504],"study_design_scores_gemma":[0.0017479927,0.00019430791,0.0027798254,0.000019624182,0.0001438549,0.000027687423,0.000022945465,0.0031553656,0.9862305,0.0017909486,0.0037833788,0.00010360095],"about_ca_topic_score_codex":0.00012265316,"about_ca_topic_score_gemma":0.000085555264,"teacher_disagreement_score":0.039224233,"about_ca_system_score_codex":0.000026025637,"about_ca_system_score_gemma":0.0001181557,"threshold_uncertainty_score":0.45527887},"labels":[],"label_agreement":null},{"id":"W4200471645","doi":"10.1007/978-1-0716-1892-9_9","title":"Adjuvants: Engineering Protective Immune Responses in Human and Veterinary Vaccines","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Immune system; Vaccine adjuvant; Acquired immune system; Adjuvant; Antigen; Immunology; Medicine; Innate immune system","score_opus":0.04216567438581861,"score_gpt":0.41916464214715166,"score_spread":0.376998967761333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200471645","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018818605,0.9810026,0.015747827,0.000015737494,0.00041864006,0.0008501684,0.000009044891,0.000036083162,0.000038032624],"genre_scores_gemma":[0.000048382517,0.9722398,0.02666859,0.000014899422,0.00002014991,0.00054858974,0.00023842716,0.000060979135,0.00016020522],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9893217,0.008576765,0.0009851197,0.0006343798,0.000017402552,0.00046462985],"domain_scores_gemma":[0.99825627,0.0009322662,0.0002754911,0.00048104645,0.000040927243,0.000014001907],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022932342,0.0004830354,0.0020981724,0.00096476317,0.000060141363,0.0000137440975,0.00028481736,0.0011974331,0.000058756126],"category_scores_gemma":[0.0015217956,0.00043951068,0.00024840469,0.00046445022,0.000110525,0.00004438404,0.00038384506,0.001042538,0.000010635011],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000060677467,0.000033322314,0.000006171046,0.0010477556,0.00016677775,0.00013764155,0.0000819172,9.724048e-7,0.49296132,0.00055016164,0.0000014630541,0.50495183],"study_design_scores_gemma":[0.0013091252,0.0006680168,0.00018114423,0.008896624,0.00020516184,0.0011034401,0.00007155274,0.0000034216766,0.057288088,0.00036513555,0.92897666,0.0009316556],"about_ca_topic_score_codex":0.00006923539,"about_ca_topic_score_gemma":0.0000033003462,"teacher_disagreement_score":0.92897516,"about_ca_system_score_codex":0.000114355746,"about_ca_system_score_gemma":0.00013294553,"threshold_uncertainty_score":0.9998057},"labels":[],"label_agreement":null},{"id":"W4200595960","doi":"10.1007/978-1-0716-1884-4_9","title":"Design of Replication-Competent VSV- and Ervebo-Vectored Vaccines Against SARS-CoV-2","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Virology; Vesicular stomatitis virus; Coronavirus; Ebola virus; Vesicular stomatitis Indiana virus; Rhabdoviridae; Recombinant DNA; Pandemic; Vector (molecular biology); Biology; Virus; Medicine; Coronavirus disease 2019 (COVID-19); Infectious disease (medical specialty); Gene; Disease","score_opus":0.0907830784355276,"score_gpt":0.4590775742882671,"score_spread":0.36829449585273955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4200595960","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43021625,0.0028589282,0.5656749,0.00039815402,0.00007157644,0.00033170986,0.0000024645437,0.000022572172,0.00042347697],"genre_scores_gemma":[0.05789004,0.00008739394,0.9228539,0.018951664,0.000046001427,0.000106709005,0.000014920377,0.00003623152,0.000013145201],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969502,0.0015504224,0.00044298253,0.00062580727,0.000121004414,0.00030955204],"domain_scores_gemma":[0.99826825,0.00051375985,0.00009960202,0.0008574767,0.00023571201,0.000025206786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017733168,0.00017099224,0.00054539216,0.00023860513,0.000028585044,0.00000927785,0.00016269185,0.00021893176,0.0000039667952],"category_scores_gemma":[0.0023155564,0.0001514122,0.000097360215,0.00052293035,0.00013403529,0.00001729239,0.00016500546,0.000248162,0.0000030229767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014122626,0.000111100286,0.01629188,0.00008280033,0.00008245571,0.00016918949,0.00007617872,0.0000018729515,0.955395,0.0006257323,0.000014782823,0.027007783],"study_design_scores_gemma":[0.0011993151,0.00023192778,0.0033355167,0.000045667974,0.000032646443,0.00008266715,0.000038208655,0.0012903847,0.98604965,0.0026462397,0.004916634,0.00013112945],"about_ca_topic_score_codex":0.00006230561,"about_ca_topic_score_gemma":0.000009094353,"teacher_disagreement_score":0.3723262,"about_ca_system_score_codex":0.000050598846,"about_ca_system_score_gemma":0.00023850592,"threshold_uncertainty_score":0.617441},"labels":[],"label_agreement":null},{"id":"W4205116883","doi":"10.1007/978-1-0716-1732-8_12","title":"Integrating an ER Stress Reporter for Monitoring Genome-Wide UPR-ER in Budding Yeast","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Proteostasis; Unfolded protein response; Biology; Reporter gene; Endoplasmic reticulum; Computational biology; Budding yeast; Saccharomyces cerevisiae; Gene; Genetic screen; Genome; Genetics; High-throughput screening; Mutant; Gene expression","score_opus":0.03943871368514354,"score_gpt":0.41941969780889726,"score_spread":0.3799809841237537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205116883","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.723462,0.0010288365,0.27423805,0.000074671414,0.0003511564,0.00041469,0.000047524845,0.000009722686,0.0003733493],"genre_scores_gemma":[0.60048413,0.00003439701,0.39806578,0.0001563598,0.00017678,0.0005342192,0.00025884196,0.000053572967,0.00023592917],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996898,0.0012004983,0.00046075863,0.0007364805,0.00012804123,0.0005762209],"domain_scores_gemma":[0.9991606,0.000075771815,0.000110170884,0.00048719306,0.00007636552,0.000089885405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020537518,0.00021403689,0.0002825842,0.00023923957,0.00011982587,0.000024592808,0.00044561786,0.00018613545,0.00003695029],"category_scores_gemma":[0.000603183,0.00021874844,0.000115708484,0.00026890307,0.000077320285,0.0000039766696,0.00055334525,0.00035731954,6.349716e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000106346604,0.00008713975,0.054828685,0.000018956343,0.000026389882,0.000034744156,0.00013149313,0.0015830423,0.9352374,0.00010188268,0.000008250595,0.007835655],"study_design_scores_gemma":[0.00079605763,0.0007592468,0.0043062847,0.000015733287,0.000009555905,0.00003178472,0.00090624794,0.0011367241,0.9790366,0.0012448868,0.01135995,0.00039687482],"about_ca_topic_score_codex":0.00007552117,"about_ca_topic_score_gemma":0.00005738063,"teacher_disagreement_score":0.12382773,"about_ca_system_score_codex":0.00007489967,"about_ca_system_score_gemma":0.00009701706,"threshold_uncertainty_score":0.89203024},"labels":[],"label_agreement":null},{"id":"W4205334981","doi":"10.1007/978-1-0716-1871-4_20","title":"Single-Cell Multiparametric Analysis of Rare HIV-Infected Cells Identified by Duplexed RNAflow-FISH","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Flow cytometry; In situ hybridization; Fish <Actinopterygii>; In situ; Human immunodeficiency virus (HIV); RNA; Cell; Biology; Fluorescence in situ hybridization; Peripheral blood mononuclear cell; Virology; In vivo; Molecular biology; Chemistry; Messenger RNA; In vitro; Gene; Biochemistry; Genetics","score_opus":0.02136949123006539,"score_gpt":0.33944029278006355,"score_spread":0.31807080154999817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205334981","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8371895,0.003936747,0.1558335,0.0001147374,0.00043058427,0.0005695092,0.0014045871,0.000052683696,0.00046813858],"genre_scores_gemma":[0.9207358,0.00007826245,0.07204487,0.0002232006,0.000005041277,0.0002749943,0.005136019,0.00003918961,0.001462612],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9920461,0.0060511357,0.0005837455,0.0006292587,0.00006830309,0.00062141236],"domain_scores_gemma":[0.99799454,0.00097126915,0.00023725622,0.0006708803,0.00007925696,0.000046798254],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013186405,0.00024741693,0.0008183435,0.001565259,0.0001419876,0.00000902362,0.00058839796,0.00026456523,0.0018261543],"category_scores_gemma":[0.0006124613,0.0002396801,0.00036299313,0.0030582084,0.00025094705,0.000019806108,0.0005801292,0.000525162,0.000052786476],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001684239,0.00097628916,0.010602091,0.000011312124,0.0014340366,0.000050047947,0.000118084994,0.00025598524,0.9796454,0.00002942576,0.001340492,0.0053684497],"study_design_scores_gemma":[0.0023983098,0.0005391463,0.0014917459,0.0000020750592,0.00043323607,0.000007713046,0.00012515213,0.00014614363,0.9835515,0.00007990028,0.0110020805,0.00022301459],"about_ca_topic_score_codex":0.0003685442,"about_ca_topic_score_gemma":0.000034073324,"teacher_disagreement_score":0.08378862,"about_ca_system_score_codex":0.00015643386,"about_ca_system_score_gemma":0.00006401283,"threshold_uncertainty_score":0.9990863},"labels":[],"label_agreement":null},{"id":"W4205457914","doi":"10.1007/978-1-0716-1952-0_18","title":"Magnetic Resonance Imaging in the Contemporary Management of Medulloblastoma: Current and Emerging Applications","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre","funders":"","keywords":"Medulloblastoma; Medicine; Magnetic resonance imaging; Ependymoma; Radiology; Pilocytic astrocytoma; Radiation therapy; Glioma; Pathology; Astrocytoma; Cancer research","score_opus":0.05984456637187439,"score_gpt":0.45276970469459643,"score_spread":0.392925138322722,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205457914","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009840701,0.9901962,0.0068786005,0.00009076634,0.00008284384,0.001901389,0.000014775606,0.000007640095,0.00081791787],"genre_scores_gemma":[0.000028021368,0.9263236,0.07031076,0.000053802396,0.000012296305,0.0031793693,0.00006832581,0.000020251311,0.0000036096778],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972345,0.001474965,0.0005684553,0.0004334969,0.00009857385,0.00019000797],"domain_scores_gemma":[0.9989536,0.0003643884,0.00017948846,0.0004606858,0.000013701866,0.000028125845],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012109819,0.00022888056,0.000924009,0.00034491357,0.000028406103,0.0000042897177,0.00019952563,0.000063110565,0.000023099268],"category_scores_gemma":[0.000045284465,0.00015791503,0.00016471118,0.0005724617,0.00011081729,0.000006267226,0.00020839032,0.00030847575,6.853942e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004272777,0.00020725618,0.00056973577,0.0025168704,0.00002678249,0.0001771413,0.00005813191,1.3501288e-7,0.000010740836,0.0029294915,0.000014888945,0.99348456],"study_design_scores_gemma":[0.0005322425,0.000073526884,0.0002199851,0.0019429779,0.0003060141,0.000054133085,0.00012130506,0.000007137838,0.000008643639,0.0005522097,0.9960684,0.00011341152],"about_ca_topic_score_codex":0.000019801495,"about_ca_topic_score_gemma":0.0000012128146,"teacher_disagreement_score":0.9960535,"about_ca_system_score_codex":0.00007247747,"about_ca_system_score_gemma":0.000054101554,"threshold_uncertainty_score":0.6439588},"labels":[],"label_agreement":null},{"id":"W4205756187","doi":"10.1007/978-1-0716-1871-4_7","title":"Flow Cytometry Sorting of Memory CCR6+CD4+ T-Cells for HIV Reservoir Quantification","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Flow cytometry; C-C chemokine receptor type 6; Virology; Immunology; Biology; Cell sorting; Peripheral blood mononuclear cell; Isolation (microbiology); Human immunodeficiency virus (HIV); Viral load; Immune system; Microbiology; Chemokine; Chemokine receptor; In vitro; Genetics","score_opus":0.04501421417395324,"score_gpt":0.4082654736932227,"score_spread":0.36325125951926945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205756187","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13331819,0.003978078,0.8598701,0.0004606303,0.0005662013,0.0008546757,0.00038023226,0.000034288794,0.00053762353],"genre_scores_gemma":[0.34921208,0.00004865116,0.6472299,0.0001271886,0.000017721617,0.00083108357,0.0013202322,0.00003585742,0.001177291],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954781,0.0031177353,0.00046946306,0.00043333773,0.000038887774,0.00046245905],"domain_scores_gemma":[0.9984602,0.00082301634,0.00018240245,0.00044167723,0.000070199254,0.000022549524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029542833,0.00014611904,0.0003882741,0.0003998015,0.00017233417,0.0000036025262,0.00036539623,0.00017516733,0.0003750926],"category_scores_gemma":[0.00069577276,0.00013920576,0.0001516198,0.00039573637,0.00019771507,0.000016213691,0.00026313952,0.00034396845,0.00003805684],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002586197,0.00023958995,0.0012290586,0.00003080564,0.00014441025,0.000009088196,0.00015440282,0.00044330087,0.9724378,0.0010491038,0.00040800462,0.023595845],"study_design_scores_gemma":[0.001746345,0.0005306521,0.00019852634,0.000005686979,0.000025061714,0.000015478143,0.00034603447,0.00034439328,0.9779516,0.002282675,0.016415166,0.00013842182],"about_ca_topic_score_codex":0.000058560065,"about_ca_topic_score_gemma":0.000006590392,"teacher_disagreement_score":0.21589391,"about_ca_system_score_codex":0.00008689904,"about_ca_system_score_gemma":0.00009647807,"threshold_uncertainty_score":0.5676646},"labels":[],"label_agreement":null},{"id":"W4205968278","doi":"10.1007/978-1-59745-000-3","title":"Xenopus Protocols","year":2006,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Core Research for Evolutional Science and Technology; U.S. National Library of Medicine; National Institute of Child Health and Human Development; National Cancer Institute; College of Life Sciences and Medicine, University of Aberdeen; RIKEN; Medical Research Council; Biosignal Research Center, Kobe University; Baylor University; University of California, San Francisco; Van Andel Research Institute; Istituto Pasteur-Fondazione Cenci Bolognetti; University of California, San Diego; University of Ottawa; Joint Genome Institute; Directorate for Biological Sciences; National Institutes of Health; University of Waterloo; Institut National de la Santé et de la Recherche Médicale; Centre National de la Recherche Scientifique; University of Oxford; University of Aberdeen; Medical Center, University of Rochester; University of Texas Health Science Center at San Antonio; University of California, Irvine; Novartis Institutes for BioMedical Research; Universität Basel; University of Tokyo; Johns Hopkins University; University of Rochester; Baylor College of Medicine; Japan Science and Technology Agency; U.S. Department of Energy","keywords":"Xenopus; Computer science; Biology; Computational biology; Genetics","score_opus":0.02146895493515304,"score_gpt":0.37426803486246263,"score_spread":0.3527990799273096,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4205968278","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00022560885,0.0022237236,0.8486775,0.00008902172,0.000522529,0.006653029,0.000080967424,0.000050181745,0.1414774],"genre_scores_gemma":[0.000059050304,0.00009407615,0.6680058,0.0009945051,0.00072015065,0.002760474,0.0014594379,0.000252616,0.32565388],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99578625,0.0010908513,0.000813232,0.0013597137,0.00017480164,0.0007751438],"domain_scores_gemma":[0.99789566,0.00005135161,0.00037001178,0.0014179727,0.00013952622,0.0001254942],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012364256,0.0007416575,0.0008839637,0.0002851469,0.00006686839,0.000039181486,0.000920354,0.0020164473,0.00006546382],"category_scores_gemma":[0.0002475604,0.0007824151,0.00036358018,0.00011076527,0.00039227915,0.0000016901109,0.0005220378,0.0007054237,0.000036653586],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005361001,0.00012431378,0.0003212596,0.00014639465,0.00013769609,0.00006781781,0.000040732593,0.00022606959,0.968469,0.0027185325,0.019863432,0.007831131],"study_design_scores_gemma":[0.00066701684,0.00051077566,0.000039703922,0.000061319704,0.000051875828,0.00003835731,0.0000026387916,0.000027476748,0.23927851,0.028521176,0.72996527,0.000835887],"about_ca_topic_score_codex":0.000045653036,"about_ca_topic_score_gemma":0.00006816405,"teacher_disagreement_score":0.7291905,"about_ca_system_score_codex":0.00011142458,"about_ca_system_score_gemma":0.00048735185,"threshold_uncertainty_score":0.99946266},"labels":[],"label_agreement":null},{"id":"W4206095836","doi":"10.1007/978-1-0716-1697-0_8","title":"Nuclear RNA Isolation and Sequencing","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Polyadenylation; RNA; Biology; Transcriptome; Genetics; Gene; Enhancer; Computational biology; Deep sequencing; DNA sequencing; Gene expression; Genome","score_opus":0.023691632421137344,"score_gpt":0.3895318362815264,"score_spread":0.365840203860389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206095836","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07176487,0.0030175128,0.9227355,0.00025913038,0.00016598254,0.00015704277,0.0000048230286,0.000015673344,0.0018794693],"genre_scores_gemma":[0.12507251,0.00069320924,0.87253016,0.001170447,0.00009496328,0.000030531945,0.0000971299,0.000066445624,0.00024459625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975725,0.0010760984,0.00025422018,0.00063646847,0.000085471824,0.0003752312],"domain_scores_gemma":[0.9992626,0.00003444173,0.000058200418,0.0004455539,0.000107695174,0.00009153722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007924216,0.0001737263,0.0002184561,0.00011817732,0.000060309303,0.000026941669,0.00015555788,0.00038623335,0.000059224625],"category_scores_gemma":[0.00068621075,0.0001938875,0.00008099437,0.00026579268,0.000114582486,0.0000031600896,0.00034658602,0.0002700227,0.0000049146897],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003105046,0.000015596263,0.00005370849,0.00001283711,0.000038568825,0.00005723927,0.00003714713,0.00011388236,0.9794846,0.0033024875,0.000026690923,0.016826155],"study_design_scores_gemma":[0.0005203499,0.00016279743,0.000049742124,0.0000144496935,0.000011917295,0.000117473704,0.00008956525,0.0013781872,0.98248386,0.0035687052,0.01138387,0.00021905625],"about_ca_topic_score_codex":0.000028924265,"about_ca_topic_score_gemma":0.000025543917,"teacher_disagreement_score":0.05330764,"about_ca_system_score_codex":0.000059672682,"about_ca_system_score_gemma":0.0001626231,"threshold_uncertainty_score":0.7906503},"labels":[],"label_agreement":null},{"id":"W4206121100","doi":"10.1007/978-1-0716-1382-5","title":"Myofibroblasts","year":2021,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Soft tissue tumor case studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Myofibroblast; Medicine; Pathology; Fibrosis","score_opus":0.0330011890310054,"score_gpt":0.43143917396797604,"score_spread":0.39843798493697064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206121100","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010180738,0.042151272,0.3123554,0.00065048714,0.0010406256,0.00075297704,0.000024052972,0.0001337729,0.6427896],"genre_scores_gemma":[0.0000046604,0.00025300594,0.6763444,0.000931352,0.00021068171,0.00005316327,0.00018669027,0.00008434959,0.3219317],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997387,0.00080412073,0.000496117,0.0007574701,0.00012839344,0.0004269231],"domain_scores_gemma":[0.9984178,0.00047107064,0.0001449298,0.00073909725,0.00012820723,0.00009891625],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00072486186,0.00041540992,0.0013751892,0.00036372046,0.000024621091,0.000005920262,0.00014483712,0.0007069314,0.0003851608],"category_scores_gemma":[0.001513831,0.0003981713,0.0003068154,0.0001972416,0.00030369617,0.0000062703393,0.00033064972,0.00082478655,0.00006232603],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029918857,0.0002926002,0.0016343566,0.0019058841,0.0022339474,0.039992943,0.00054940773,0.0000051489396,0.7170394,0.04877977,0.03481573,0.15245165],"study_design_scores_gemma":[0.0014851802,0.00060914364,0.00025265652,0.00097148,0.00042845585,0.0014355378,0.00004291923,0.000009812061,0.038712557,0.03448171,0.92084813,0.0007224271],"about_ca_topic_score_codex":0.000008936052,"about_ca_topic_score_gemma":0.0000063566754,"teacher_disagreement_score":0.8860324,"about_ca_system_score_codex":0.000266808,"about_ca_system_score_gemma":0.00051582546,"threshold_uncertainty_score":0.999847},"labels":[],"label_agreement":null},{"id":"W4206400641","doi":"10.1007/978-1-0716-1952-0_1","title":"Childhood Medulloblastoma: An Overview","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Medulloblastoma; Medicine; Oncology; Targeted therapy; Pediatric cancer; Internal medicine; Childhood cancer; Bioinformatics; Cancer; Pathology; Biology","score_opus":0.11020463465714309,"score_gpt":0.4976525546831739,"score_spread":0.3874479200260308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206400641","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009757435,0.9951479,0.002125391,0.00003679959,0.00048729888,0.0012842016,0.00003723538,0.00006135741,0.00081010227],"genre_scores_gemma":[2.5036e-7,0.7561418,0.24201314,0.00029779307,0.00007188081,0.00089714193,0.00048950326,0.00007567766,0.000012832509],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9937732,0.0040095616,0.0007263311,0.00089164544,0.00014099768,0.00045824892],"domain_scores_gemma":[0.99811167,0.00044289848,0.00025728624,0.0009862753,0.000025941106,0.00017591794],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001255412,0.0005458847,0.0028620805,0.00056324754,0.000050390605,0.000009888665,0.0003138008,0.0004974286,0.0010613459],"category_scores_gemma":[0.0005766291,0.0004154374,0.0008114459,0.0007207781,0.000078270816,0.000013841969,0.0002793556,0.00071710075,0.000024373496],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004262644,0.0007916797,0.00003154764,0.0018082416,0.00036161472,0.0006991681,0.000036750058,2.6392587e-7,0.000032754586,0.0023472428,0.000021732085,0.9938647],"study_design_scores_gemma":[0.0006746597,0.00072656275,0.000026428143,0.0015107112,0.0013586376,0.00045990516,0.000011829347,0.0000014041311,0.000061454964,0.000760577,0.9940865,0.0003213168],"about_ca_topic_score_codex":0.00003334142,"about_ca_topic_score_gemma":0.0000049393943,"teacher_disagreement_score":0.9940648,"about_ca_system_score_codex":0.000273686,"about_ca_system_score_gemma":0.0002959388,"threshold_uncertainty_score":0.9998518},"labels":[],"label_agreement":null},{"id":"W4206462320","doi":"10.1007/978-1-0716-1871-4_18","title":"Inducing Long-Term HIV-1 Latency in the TKO-BLT Mouse Model","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Humanized mouse; Immune system; Latency (audio); Human immunodeficiency virus (HIV); Medicine; Wasting; Bone marrow; Immunology; Antiretroviral therapy; Animal model; Viral load; Computer science; Internal medicine","score_opus":0.04153829437229667,"score_gpt":0.39379197928765985,"score_spread":0.3522536849153632,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206462320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8321732,0.003267573,0.16178697,0.0008543053,0.00018917183,0.0005627342,0.00009519416,0.000029770452,0.0010410742],"genre_scores_gemma":[0.9284616,0.00011429493,0.06731712,0.0009590197,0.000011460486,0.0007790574,0.0006086153,0.000031818356,0.001717031],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9930684,0.0055500334,0.0003066629,0.00043210867,0.00004122362,0.00060157775],"domain_scores_gemma":[0.9991016,0.0003203373,0.00006190028,0.00047955624,0.000017284245,0.000019332321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022219326,0.0001774371,0.00029740794,0.00029203482,0.00017847496,0.000008056468,0.00058320153,0.00018731304,0.00040591502],"category_scores_gemma":[0.00020035786,0.00013237192,0.00009313822,0.00032731454,0.00017757658,0.000020842734,0.0003783174,0.0009400931,0.000104473176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010524852,0.00038495843,0.03459421,0.000007709457,0.00008614918,0.00019588662,0.0012201772,0.0008021029,0.94557357,0.002626199,0.000115628354,0.01428818],"study_design_scores_gemma":[0.016791146,0.0033644587,0.044257365,0.00004917568,0.00015557796,0.0008424239,0.0025123684,0.0019210094,0.885817,0.030061869,0.012301615,0.0019260156],"about_ca_topic_score_codex":0.00014761649,"about_ca_topic_score_gemma":0.00004794843,"teacher_disagreement_score":0.096288376,"about_ca_system_score_codex":0.0001201795,"about_ca_system_score_gemma":0.00009726102,"threshold_uncertainty_score":0.53979707},"labels":[],"label_agreement":null},{"id":"W4206469293","doi":"10.1007/978-1-0716-1661-1_4","title":"Imaging the Actin Cytoskeleton in Fixed Budding Yeast Cells","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Columbia College","funders":"National Institute of General Medical Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute; National Institute on Aging","keywords":"Budding yeast; Yeast; Actin cytoskeleton; Saccharomyces cerevisiae; Cytoskeleton; Cell biology; Actin; Biology; Fluorescence microscope; Cell; Genetics; Fluorescence; Physics; Optics","score_opus":0.011112947142728117,"score_gpt":0.38913812114567226,"score_spread":0.37802517400294416,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206469293","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038903307,0.0016638638,0.9580165,0.00026590185,0.00019417671,0.00019830062,0.000007621685,0.000021700122,0.00072863774],"genre_scores_gemma":[0.03404297,0.00023595706,0.96442676,0.0009346612,0.00005714075,0.000066223336,0.000047991973,0.00003900478,0.00014927807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99737793,0.0012050564,0.00032050067,0.0005940251,0.000054967295,0.00044753266],"domain_scores_gemma":[0.9991639,0.00006616976,0.000088813744,0.0005875686,0.000054953467,0.000038593756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009247608,0.00020768226,0.00024296554,0.00008032143,0.000056607016,0.000023435497,0.00036211513,0.00021125583,0.000020015847],"category_scores_gemma":[0.0005422121,0.00018284639,0.000096829295,0.0003253157,0.00018571212,0.0000037855916,0.00037462625,0.00033356884,0.0000023670798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002163057,0.000032518405,0.0025318984,0.0000069540206,0.000008402707,0.000057393318,0.000033724653,0.000055269917,0.97999275,0.00023131662,0.00006523403,0.01696291],"study_design_scores_gemma":[0.00026593707,0.000035944442,0.00021268257,0.000023066677,0.0000048532283,0.000033581604,0.00013460452,0.00011835765,0.9855279,0.0016568182,0.011783176,0.00020309066],"about_ca_topic_score_codex":0.000045563927,"about_ca_topic_score_gemma":0.000047275033,"teacher_disagreement_score":0.016759818,"about_ca_system_score_codex":0.000045382134,"about_ca_system_score_gemma":0.000085523265,"threshold_uncertainty_score":0.7456259},"labels":[],"label_agreement":null},{"id":"W4206516340","doi":"10.1007/978-1-0716-2067-0_16","title":"Visualization Tools for Genomic Conservation","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Global Institute for Water Security; University of Saskatchewan","funders":"","keywords":"Visualization; Computer science; Synteny; Snapshot (computer storage); Visual analytics; Data mining; Genome; Biology; Database","score_opus":0.04064117009068109,"score_gpt":0.3937467802128368,"score_spread":0.35310561012215574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206516340","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33902273,0.0012067577,0.65875727,0.00016422643,0.00025571743,0.00036254418,0.00004247327,0.0000032408311,0.00018503252],"genre_scores_gemma":[0.30619267,0.00013580885,0.6892136,0.0026833897,0.00010877355,0.0009124893,0.0005415972,0.000046823978,0.00016488747],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985718,0.00056893117,0.0002419831,0.0003609372,0.00003656319,0.00021979366],"domain_scores_gemma":[0.9995313,0.00008295698,0.00008846915,0.00022711627,0.000047175443,0.000022974995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00090824306,0.00011917346,0.00016552258,0.000074799806,0.00012409901,0.00001121388,0.00018481376,0.000083872124,0.000015396525],"category_scores_gemma":[0.00032252446,0.00013485814,0.00008253935,0.000113675706,0.00005198274,4.955348e-7,0.00025766258,0.000061073166,4.854381e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000064241685,0.000030252953,0.0027921582,0.000006007249,0.000035030975,6.6721606e-7,0.000040003673,0.0006776769,0.9815102,0.0065367883,0.00012945624,0.008177517],"study_design_scores_gemma":[0.001395724,0.0010311228,0.0038991072,0.00000187208,0.000028395052,0.000016590206,0.00023957036,0.0013475238,0.5662144,0.014910935,0.41049936,0.00041538608],"about_ca_topic_score_codex":0.000016619797,"about_ca_topic_score_gemma":0.0000094484185,"teacher_disagreement_score":0.4152958,"about_ca_system_score_codex":0.000030695064,"about_ca_system_score_gemma":0.000056248875,"threshold_uncertainty_score":0.5499355},"labels":[],"label_agreement":null},{"id":"W4206568733","doi":"10.1007/978-1-59745-561-9_23","title":"Ethics of Cancer Gene Transfer Clinical Research","year":2009,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Gene transfer; Political science; Medicine; Gene; Biology; Genetics","score_opus":0.21268804315772075,"score_gpt":0.5785720759792752,"score_spread":0.36588403282155446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206568733","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045998503,0.20187,0.51899195,0.0052447887,0.0023640823,0.005697792,0.0008752562,0.000094161725,0.2188635],"genre_scores_gemma":[0.0055710725,0.14291784,0.6386901,0.005796652,0.0025969653,0.00044964952,0.0013762414,0.00091498997,0.20168649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9905618,0.0056371302,0.0011915189,0.0013432294,0.00046273976,0.00080360525],"domain_scores_gemma":[0.99703795,0.0005495976,0.00014767527,0.0014175142,0.0006640944,0.00018315396],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.014177446,0.00048728235,0.0010293985,0.0005201214,0.00007349145,0.000011296674,0.0010552105,0.0036373334,0.00025497272],"category_scores_gemma":[0.0009768807,0.0004806866,0.00054893794,0.00016519705,0.0013729885,0.0000014774942,0.0003169389,0.003363868,0.000012598549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014199008,0.000081133534,0.00009516022,0.000049382048,0.0002935749,0.000037304926,0.000031949574,0.000029166114,0.8549546,0.0059222686,0.00012032477,0.13696526],"study_design_scores_gemma":[0.0009645145,0.005316215,0.000033227294,0.00009620121,0.000046787958,0.0000076854985,0.0000052590194,0.000011119449,0.80729866,0.027924003,0.15779592,0.0005004407],"about_ca_topic_score_codex":0.00006806015,"about_ca_topic_score_gemma":0.00047671638,"teacher_disagreement_score":0.1576756,"about_ca_system_score_codex":0.00007096672,"about_ca_system_score_gemma":0.0010983766,"threshold_uncertainty_score":0.9997645},"labels":[],"label_agreement":null},{"id":"W4206579677","doi":"10.1007/978-1-0716-1538-6_25","title":"Correction to: Live Imaging and Analysis of Cilia and Cell Cycle Dynamics with the Arl13bCerulean-Fucci2a Biosensor and Fucci Tools","year":2021,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Medical Research Council","keywords":"Cilium; Computer science; Biology; Cell biology","score_opus":0.007774557477878224,"score_gpt":0.292605744645878,"score_spread":0.2848311871679998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206579677","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3527243,0.049691882,0.58365506,0.0009938633,0.004617367,0.0014980189,0.0010602971,0.000025294095,0.005733889],"genre_scores_gemma":[0.31412858,0.01590001,0.6369883,0.004775167,0.0006589662,0.00019953505,0.0086758025,0.00026333862,0.018410318],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786025,0.0008294201,0.00023797389,0.00073408487,0.00007438421,0.00026389965],"domain_scores_gemma":[0.99904454,0.00014123677,0.00019660704,0.00041874417,0.00011924277,0.000079636135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059660856,0.00029555598,0.000576873,0.00024060236,0.00009147214,0.000041023388,0.00018793394,0.0003981299,0.000006821764],"category_scores_gemma":[0.00027084182,0.0002427858,0.00010525128,0.0004028973,0.0003553266,0.0000034283598,0.0004671732,0.0004030222,2.2874947e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00046430237,0.00014341123,0.06474576,0.0003395495,0.0034315793,0.00012073502,0.0009779885,0.00025958175,0.8535604,0.00024288584,0.007965252,0.06774858],"study_design_scores_gemma":[0.00577509,0.005415049,0.27700874,0.0007776234,0.01776194,0.0006269087,0.009682973,0.041906018,0.536485,0.0016543913,0.09635353,0.006552752],"about_ca_topic_score_codex":0.0002436142,"about_ca_topic_score_gemma":0.00072713714,"teacher_disagreement_score":0.3170754,"about_ca_system_score_codex":0.000024025761,"about_ca_system_score_gemma":0.00007704407,"threshold_uncertainty_score":0.99005175},"labels":[],"label_agreement":null},{"id":"W4206832962","doi":"10.1007/978-1-0716-1871-4_13","title":"More than a Gender Issue: Testis as a Distinctive HIV Reservoir and Its Implication for Viral Eradication","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"HIV Legal Network; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Immune privilege; Flow cytometry; Immune system; Human immunodeficiency virus (HIV); Biology; Immunology; Lymph; Antiretroviral therapy; Virology; Viral load; Medicine; Pathology","score_opus":0.03431248517621992,"score_gpt":0.4169641443233042,"score_spread":0.38265165914708427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4206832962","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6096185,0.0122162625,0.36929038,0.004368517,0.00025251214,0.0024329529,0.0007681092,0.00007675672,0.0009760439],"genre_scores_gemma":[0.85829794,0.000077738914,0.1340574,0.0003137383,0.000024042996,0.0037295702,0.002089532,0.000031804095,0.001378231],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973732,0.0015988573,0.00019749264,0.00045499334,0.000026138196,0.00034928657],"domain_scores_gemma":[0.99919516,0.000406355,0.000074067204,0.000243387,0.000051042487,0.000029996283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079063553,0.00013730847,0.00021856959,0.00016028121,0.00023832016,0.000005931576,0.00018909585,0.00013545087,0.0002090531],"category_scores_gemma":[0.0006145448,0.0001263281,0.000054861925,0.00016767847,0.00014019608,0.00002212794,0.000225832,0.00025805144,0.000040909123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003639359,0.00015231076,0.007971641,0.000015980731,0.00014945092,0.000010385094,0.00055005786,0.000012236528,0.9712643,0.00740024,0.0003293778,0.0117800515],"study_design_scores_gemma":[0.008675265,0.003507265,0.075783364,0.000013188796,0.0001548536,0.0004976512,0.0010702839,0.00046875273,0.66804236,0.05819599,0.18286206,0.0007289798],"about_ca_topic_score_codex":0.00006981734,"about_ca_topic_score_gemma":0.0000032148346,"teacher_disagreement_score":0.303222,"about_ca_system_score_codex":0.00010294183,"about_ca_system_score_gemma":0.00006888675,"threshold_uncertainty_score":0.515151},"labels":[],"label_agreement":null},{"id":"W4210426923","doi":"10.1007/978-1-0716-2059-5_16","title":"Quantitative Methods to Assess Adipose Vasculature","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cardiovascular Disease and Adiposity","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Adipose tissue; Angiogenesis; Pathology; Biology; Medicine; Internal medicine; Endocrinology","score_opus":0.1562744764515419,"score_gpt":0.546805503073046,"score_spread":0.3905310266215041,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210426923","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000010485239,0.5511019,0.44622904,0.00003190443,0.00041689456,0.0012252232,0.000038652004,0.000044465716,0.00091087184],"genre_scores_gemma":[2.145953e-8,0.48919576,0.5094561,0.00040306893,0.00005757297,0.0004287568,0.00027461947,0.000078169505,0.00010594243],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.978066,0.018705508,0.0009057503,0.0013978768,0.00025884583,0.00066601246],"domain_scores_gemma":[0.9960848,0.0015687539,0.0002515717,0.0016328321,0.00006541993,0.00039662694],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.005799814,0.0007593531,0.004669415,0.0009925372,0.00009062703,0.00002551098,0.00054575363,0.0009414331,0.00037446],"category_scores_gemma":[0.0026395754,0.00064553536,0.0033843666,0.0018119701,0.00012920398,0.000025195954,0.0007182496,0.0019361483,0.000026038653],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005737842,0.00014196805,0.000007665676,0.003837664,0.0031996064,0.00074532133,0.00004214502,0.000006603125,0.001535373,0.0036763337,0.000041213545,0.9867087],"study_design_scores_gemma":[0.00045971468,0.0003675051,0.000016600969,0.0014532921,0.0067194137,0.00039636611,0.000024043176,0.000011047689,0.00031350434,0.00071151304,0.9889036,0.0006234079],"about_ca_topic_score_codex":0.00002382321,"about_ca_topic_score_gemma":0.0000014818003,"teacher_disagreement_score":0.9888624,"about_ca_system_score_codex":0.0002521459,"about_ca_system_score_gemma":0.0005172124,"threshold_uncertainty_score":0.9995996},"labels":[],"label_agreement":null},{"id":"W4210492918","doi":"10.1007/978-1-61779-231-1_23","title":"Seed Bioinformatics","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Biotechnology and Biological Sciences Research Council","keywords":"Arabidopsis; Arabidopsis thaliana; Identification (biology); Function (biology); Computational biology; Context (archaeology); Biology; Transcriptome; Gene; Data mining; Computer science; Bioinformatics; Genetics; Gene expression; Botany","score_opus":0.0714892079517697,"score_gpt":0.3727888616915499,"score_spread":0.3012996537397802,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210492918","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7541869,0.0005205503,0.21631542,0.000403518,0.0002995745,0.00055500056,0.000045143828,0.00014508612,0.027528787],"genre_scores_gemma":[0.07081199,0.0000470654,0.9280405,0.00083312317,0.000032259624,0.000045487683,0.000096569005,0.0000019699294,0.00009101336],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99781364,0.0010386085,0.00029938898,0.00029155632,0.00006761003,0.0004891869],"domain_scores_gemma":[0.9994674,0.00022464186,0.00006853371,0.000112249654,0.000039567985,0.000087616616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012969411,0.00015516783,0.00024708002,0.000052077274,0.00005111166,0.00000920999,0.0004878913,0.0002884499,0.0002974514],"category_scores_gemma":[0.00033670652,0.00006262999,0.00008902118,0.00044693795,0.00017289812,0.000029818519,0.0002091405,0.0002553458,0.00006597384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022940818,0.00004240366,0.021522937,0.00000235665,0.000012732018,0.00003533225,0.00005850586,2.2675266e-7,0.9209319,0.0022759598,0.00000920556,0.055085503],"study_design_scores_gemma":[0.0004988292,0.0009959615,0.12791878,0.000020093996,0.000016923657,0.00015011107,0.00025068453,0.00069703243,0.8197838,0.0360715,0.012880418,0.0007158706],"about_ca_topic_score_codex":0.0001629183,"about_ca_topic_score_gemma":0.000088318615,"teacher_disagreement_score":0.7117251,"about_ca_system_score_codex":0.000018479013,"about_ca_system_score_gemma":0.000010904052,"threshold_uncertainty_score":0.32568842},"labels":[],"label_agreement":null},{"id":"W4210515920","doi":"10.1007/978-1-0716-1859-2_17","title":"Insect Cells-Baculovirus System for the Production of Difficult to Express Proteins: From Expression Screening for Soluble Constructs to Protein Quality Control","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Centre National de la Recherche Scientifique; Ligue Contre le Cancer; Université de Strasbourg; Institut National de la Santé et de la Recherche Médicale; Agence Nationale de la Recherche; Association pour la Recherche sur le Cancer","keywords":"Heterologous; Recombinant DNA; Computational biology; Homologous recombination; Baculoviridae; Inclusion bodies; Vector (molecular biology); Heterologous expression; Biology; Protein engineering; Cell biology; Biotechnology; Biochemistry; Gene; Enzyme","score_opus":0.034188686611032824,"score_gpt":0.3687002363940505,"score_spread":0.33451154978301767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210515920","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31750083,0.0004537503,0.67647105,0.00015916907,0.0007858628,0.0042551043,0.00034742279,0.000018376115,0.000008427811],"genre_scores_gemma":[0.62104315,0.0000022782756,0.36971113,0.0002886423,0.00015883583,0.008610161,0.00009004539,0.000034813183,0.00006094303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963716,0.0016694905,0.0005897611,0.00081977336,0.00014997198,0.0003993525],"domain_scores_gemma":[0.9984187,0.0002500495,0.00029926354,0.00068945996,0.00023596441,0.00010656334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016244177,0.00025664203,0.0004297524,0.000090855516,0.0003346573,0.000019707444,0.00045968514,0.0001710558,0.000010957602],"category_scores_gemma":[0.0015966502,0.00020547169,0.0002222183,0.00024601904,0.00008336112,0.000004483571,0.000392493,0.00014869246,4.241494e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0019827336,0.000107327985,0.00016263186,0.00009759738,0.00008068813,7.1555087e-7,0.00010529656,0.008730158,0.98388875,0.00024095016,0.00048817683,0.0041149645],"study_design_scores_gemma":[0.0013037336,0.001107807,0.0000994076,0.00007260709,0.000031602372,0.0000025389684,0.00046019073,0.00020908704,0.9876461,0.00026024194,0.008535775,0.00027088047],"about_ca_topic_score_codex":0.00029444997,"about_ca_topic_score_gemma":0.000021810185,"teacher_disagreement_score":0.30675992,"about_ca_system_score_codex":0.00005064768,"about_ca_system_score_gemma":0.00008973973,"threshold_uncertainty_score":0.8378892},"labels":[],"label_agreement":null},{"id":"W4210608837","doi":"10.1007/978-1-0716-2168-4_11","title":"Cloning Strategies for the Generation of Recombinant Capripoxvirus Through the Use of Screening and Selection Markers","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada; Canadian Food Inspection Agency","funders":"","keywords":"Biology; Homologous recombination; Gene; Recombinant DNA; Gene knockout; Plasmid; Genetics; Cloning (programming); Gene targeting; Virology; Molecular biology","score_opus":0.11565224178067032,"score_gpt":0.4008802237374896,"score_spread":0.2852279819568193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210608837","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08688679,0.004920428,0.90713394,0.00029094177,0.00028190415,0.00042721562,0.000021502414,0.0000063602465,0.000030924308],"genre_scores_gemma":[0.49483198,0.000512804,0.503494,0.00041097187,0.00002083344,0.00040042592,0.00007535218,0.000024094512,0.0002294932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966123,0.0026967186,0.00025962116,0.00018373317,0.000023829107,0.00022380675],"domain_scores_gemma":[0.99846905,0.0011961014,0.00013850776,0.0001437127,0.00004737082,0.0000052324986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017320995,0.000085872285,0.00019309494,0.00007151338,0.00027112305,0.000008370364,0.000172356,0.000093981165,0.000037672606],"category_scores_gemma":[0.00042636573,0.000054716136,0.00006582972,0.00018076297,0.0003273681,0.00004040092,0.00015868316,0.00028990544,1.2652654e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002575914,0.00001929113,0.0003157447,0.00000790933,0.000119084725,4.3884734e-7,0.00038198102,0.0014616278,0.94726324,0.010464925,0.00017869167,0.03952946],"study_design_scores_gemma":[0.0015541981,0.0011658279,0.0011957167,0.000011641752,0.000075558535,0.00006698658,0.0023154889,0.005934579,0.87182873,0.008459687,0.10721277,0.00017883662],"about_ca_topic_score_codex":0.0014629534,"about_ca_topic_score_gemma":0.000104019324,"teacher_disagreement_score":0.4079452,"about_ca_system_score_codex":0.000017928609,"about_ca_system_score_gemma":0.00006584734,"threshold_uncertainty_score":0.22312592},"labels":[],"label_agreement":null},{"id":"W4210970269","doi":"10.1007/978-1-0716-2035-9_26","title":"Studying Cell Polarity Dynamics During Cancer Initiation Using Inducible 3D Organotypic Cultures","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Epithelial polarity; Cell biology; Basement membrane; Cell polarity; Biology; Apical membrane; Carcinogenesis; Cell; Epithelium; Organoid; Polarity (international relations); Cancer","score_opus":0.042283595367229386,"score_gpt":0.4194642836599576,"score_spread":0.3771806882927282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4210970269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60885614,0.0007233396,0.38944286,0.00003316309,0.0003605212,0.00014481918,0.000010900479,0.00006321925,0.0003650347],"genre_scores_gemma":[0.5692626,0.000045985173,0.4304561,0.00005734011,0.00003788115,0.000065355,0.000016222282,0.000038919683,0.000019592375],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976435,0.0011364672,0.00028288492,0.0003127485,0.0001776444,0.00044678152],"domain_scores_gemma":[0.99946094,0.00014771298,0.000045711928,0.00025175366,0.000034347348,0.00005956376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015642279,0.00014788943,0.00022306012,0.00031605666,0.00016883395,0.000018774543,0.00033069975,0.0001544634,0.00024100057],"category_scores_gemma":[0.00035503614,0.00016270175,0.00004192934,0.0007748377,0.00006366278,0.000032875578,0.00048994314,0.0009182273,0.0000020034042],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000065043973,0.000030319652,0.014324697,0.00006954737,0.000023816609,0.00002210579,0.00023484563,0.031017045,0.9494297,0.00017443657,0.0000014120251,0.0046656],"study_design_scores_gemma":[0.000905191,0.000073682575,0.008801668,0.000031363757,0.000029696797,0.000022517337,0.00044599638,0.27169693,0.7139931,0.0027316127,0.0007043383,0.00056394696],"about_ca_topic_score_codex":0.00029203593,"about_ca_topic_score_gemma":0.000032717504,"teacher_disagreement_score":0.24067988,"about_ca_system_score_codex":0.0007302965,"about_ca_system_score_gemma":0.00006523096,"threshold_uncertainty_score":0.6634785},"labels":[],"label_agreement":null},{"id":"W4211056126","doi":"10.1007/978-1-0716-1138-8_19","title":"Genetic Epidemiology of Complex Phenotypes","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Genetic epidemiology; Identification (biology); Epidemiology; Genetic association; Biology; Genetics; Genotyping; Molecular epidemiology; Disease; Computational biology; Gene; Medicine; Genotype; Single-nucleotide polymorphism; Pathology","score_opus":0.12399430581371855,"score_gpt":0.48994548470016724,"score_spread":0.3659511788864487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211056126","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000025244144,0.61107504,0.3879873,0.000022328102,0.0002403044,0.00030575783,0.000049082617,0.0000060446,0.0002889355],"genre_scores_gemma":[0.000004818076,0.5358746,0.46310338,0.00017213341,0.00009750427,0.0000979564,0.0005384425,0.000046604404,0.00006452455],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.98369056,0.01226149,0.0020365682,0.0011910719,0.00006035119,0.00075996737],"domain_scores_gemma":[0.9964385,0.0010658536,0.0010640179,0.0011710877,0.00014924335,0.00011130128],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0033115016,0.0006097297,0.004005611,0.00030575023,0.00004211549,0.00000272632,0.00071873685,0.0018375488,0.00009525504],"category_scores_gemma":[0.0054386486,0.0005564626,0.0010130114,0.00044719325,0.00041275207,8.554363e-7,0.0005857954,0.00045788777,0.000009640854],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005868,0.00009579736,0.002348773,0.0011324252,0.0005154448,0.000012964225,0.00001089867,0.000068852336,0.0042100437,0.0014081898,0.00026486328,0.98992586],"study_design_scores_gemma":[0.0002619085,0.00026062844,0.00038908675,0.0004906118,0.00034275744,0.00008552633,0.000015619615,0.000026548372,0.0001476082,0.0024824757,0.99492466,0.0005725476],"about_ca_topic_score_codex":0.00006356625,"about_ca_topic_score_gemma":0.000024232144,"teacher_disagreement_score":0.99465984,"about_ca_system_score_codex":0.00005438653,"about_ca_system_score_gemma":0.0004224195,"threshold_uncertainty_score":0.9996887},"labels":[],"label_agreement":null},{"id":"W4211130583","doi":"10.1007/978-1-61779-818-4_2","title":"History of Plant Tissue Culture","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tissue culture; Plant tissue culture; Callus; Biology; Hairy root culture; Germplasm; Somatic embryogenesis; Biotechnology; In vitro; Botany; Cell biology; Biochemistry","score_opus":0.023350075979547108,"score_gpt":0.35028602598400216,"score_spread":0.3269359500044551,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211130583","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044607557,0.099791,0.8464931,0.00011052159,0.0016883742,0.00033448695,0.000058037178,0.000018012526,0.0068988777],"genre_scores_gemma":[0.09500838,0.0008033475,0.89459884,0.0007304639,0.00057978823,0.00005973029,0.001223005,0.000039716164,0.0069567487],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988603,0.00044560345,0.0002110218,0.00020546038,0.00004068063,0.00023692856],"domain_scores_gemma":[0.9995771,0.000011565903,0.00008499231,0.00023978222,0.000031278847,0.000055246284],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047182172,0.00012872728,0.00019473287,0.00005412721,0.000011454726,0.0000012467724,0.00014541937,0.00031974143,0.000022830991],"category_scores_gemma":[0.00013690928,0.00010464874,0.000055010594,0.000055351156,0.00009751204,0.0000024543308,0.00006141213,0.00009594399,0.0000034860411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021259197,0.00005053738,0.001308181,0.000011565777,0.000024342718,0.0000023621833,0.00020178511,0.0000064440737,0.98952895,0.0015051302,0.0041842717,0.003155156],"study_design_scores_gemma":[0.000114516784,0.0000785961,0.000087317196,0.0000034183397,0.000007745327,0.00002439427,0.000012287599,0.0000037291086,0.5552893,0.000051247556,0.4442458,0.00008163418],"about_ca_topic_score_codex":0.0000528646,"about_ca_topic_score_gemma":0.000034753582,"teacher_disagreement_score":0.4400615,"about_ca_system_score_codex":0.000040159008,"about_ca_system_score_gemma":0.00006463287,"threshold_uncertainty_score":0.42674518},"labels":[],"label_agreement":null},{"id":"W4211232539","doi":"10.1007/978-1-4939-7828-1_14","title":"The MRL Model: A Valuable Tool in Studies of Autoimmunity-Brain Interactions","year":2018,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Autoimmunity; Neurodegeneration; Immune system; Neuroscience; Immunology; Neuroimmunology; Disease; Autoimmune disease; Systemic lupus erythematosus; Medicine; Antibody; Biology; Pathology","score_opus":0.2143297251227669,"score_gpt":0.5378907155896133,"score_spread":0.3235609904668464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4211232539","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00005220942,0.92493296,0.07289714,0.00019878814,0.0004945366,0.00069577276,0.000015974161,0.000025803893,0.0006868088],"genre_scores_gemma":[0.0000033739598,0.89383304,0.10505331,0.00042162402,0.000015045836,0.00028649738,0.0000044376425,0.000035938927,0.00034673544],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9885339,0.009482731,0.00090805907,0.00055988284,0.000094900526,0.0004205027],"domain_scores_gemma":[0.9925557,0.006225486,0.00038381194,0.0007713363,0.00004579672,0.000017865172],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0032812757,0.0003353589,0.0013179176,0.0004324882,0.00011825146,0.00001687766,0.00091126363,0.0002715338,0.0000108216245],"category_scores_gemma":[0.013018978,0.00022270443,0.00034118633,0.0009502598,0.00091320917,0.00003428749,0.00051729585,0.0006639204,0.0000070174674],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018769348,0.00015375108,0.00000129658,0.0016807186,0.00009214416,0.000020517877,0.0005094311,0.00008141624,0.021849118,0.020948108,0.0004631208,0.9541816],"study_design_scores_gemma":[0.00024587288,0.00012001188,3.7766762e-7,0.0015796839,0.000045994475,0.00002604054,0.0001243804,0.0009771636,0.0036976251,0.050289977,0.942573,0.00031988535],"about_ca_topic_score_codex":0.0000214426,"about_ca_topic_score_gemma":0.000064231834,"teacher_disagreement_score":0.9538617,"about_ca_system_score_codex":0.000112568814,"about_ca_system_score_gemma":0.0001999517,"threshold_uncertainty_score":0.9952948},"labels":[],"label_agreement":null},{"id":"W4212816792","doi":"10.1007/978-1-0716-2075-5_3","title":"Llama DNA Immunization and Isolation of Functional Single-Domain Antibody Binders","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; University of Ottawa; Natural Sciences and Engineering Research Council of Canada; National Research Council Canada","funders":"","keywords":"Immunization; Immunogenicity; Gene gun; Naked DNA; Biology; Monoclonal antibody; Phage display; Antibody; Virology; Immune system; Immunology; Genetic enhancement; Computational biology; DNA vaccination; Gene; Genetics","score_opus":0.039871563289605595,"score_gpt":0.411754926164839,"score_spread":0.3718833628752334,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212816792","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53015953,0.0006484342,0.46741012,0.00076149515,0.00008889313,0.00014787364,0.000007292813,0.000007028424,0.0007693156],"genre_scores_gemma":[0.53730124,0.00007110139,0.4614492,0.0004462529,0.00003597556,0.000025526047,0.0003588392,0.000018415702,0.00029347246],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982375,0.0010187012,0.00024106141,0.00020362099,0.0001340701,0.0001650817],"domain_scores_gemma":[0.999524,0.0001854003,0.000068899186,0.00013099945,0.000052955045,0.00003774838],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009712794,0.00008505738,0.00022335903,0.00027174712,0.000075478834,0.000002964872,0.00005911816,0.0000667569,0.00023484773],"category_scores_gemma":[0.00016860648,0.00007881798,0.000051854156,0.00034306812,0.00015781017,0.000014047435,0.00016454507,0.00021655012,7.870553e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031937275,0.0001015574,0.035647206,0.000029540683,0.000038032318,0.000015173769,0.00010372411,0.00007340859,0.95027393,0.0057203164,0.000011212371,0.0076665087],"study_design_scores_gemma":[0.0071365545,0.006400996,0.22323146,0.00008882018,0.00012166338,0.0008787866,0.0018818623,0.01581152,0.6447781,0.066138715,0.032775454,0.0007560731],"about_ca_topic_score_codex":0.000056568693,"about_ca_topic_score_gemma":0.0000020061893,"teacher_disagreement_score":0.30549586,"about_ca_system_score_codex":0.00004397771,"about_ca_system_score_gemma":0.000051674524,"threshold_uncertainty_score":0.32141042},"labels":[],"label_agreement":null},{"id":"W4212840277","doi":"10.1007/978-1-0716-2087-8_10","title":"Measurement of Futile Creatine Cycling Using Respirometry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Phosphocreatine; Creatine; Creatine kinase; Bioenergetics; Oxidative phosphorylation; Thermogenesis; Respiration; Internal medicine; Endocrinology; Biochemistry; Biology; Mitochondrion; Chemistry; Adipose tissue; Energy metabolism; Medicine; Anatomy","score_opus":0.08245510365055042,"score_gpt":0.44878040082585985,"score_spread":0.36632529717530943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212840277","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3913879,0.009682929,0.597183,0.00011676175,0.0002758359,0.0002571569,0.0000044746366,0.000016290807,0.001075648],"genre_scores_gemma":[0.24409422,0.000021016456,0.7554026,0.00034145213,0.000044712157,0.000023880475,0.0000060657712,0.000019230252,0.000046792124],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977134,0.0012207817,0.0003864487,0.00025692073,0.000192197,0.00023024343],"domain_scores_gemma":[0.99937356,0.00006395449,0.00012519586,0.0003182086,0.0000671886,0.000051886724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003056806,0.000108586784,0.00046169103,0.00034623477,0.00004721888,0.000001187171,0.00010860343,0.00007328221,0.00023546547],"category_scores_gemma":[0.00079895696,0.000104470346,0.00009755791,0.00049477874,0.00006638874,0.00000796742,0.0001708874,0.0002705038,7.5217264e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008699975,0.000101745994,0.004135056,0.000027686137,0.000057569032,0.000047241487,0.000086372704,0.00012435084,0.9714035,0.0008655946,0.0000050271815,0.023058856],"study_design_scores_gemma":[0.0017275297,0.0005586679,0.0036410405,0.000049702863,0.00021430424,0.00013377807,0.00023116989,0.0007578121,0.96895826,0.002144891,0.021396026,0.00018684445],"about_ca_topic_score_codex":0.000100354824,"about_ca_topic_score_gemma":0.0000010220332,"teacher_disagreement_score":0.15821965,"about_ca_system_score_codex":0.000089722475,"about_ca_system_score_gemma":0.00009525587,"threshold_uncertainty_score":0.42601773},"labels":[],"label_agreement":null},{"id":"W4212853344","doi":"10.1007/978-1-0716-1270-5_25","title":"Integrative Methods for Studying Cardiac Energetics","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"Agence Nationale de la Recherche","keywords":"Cardiovascular physiology; Function (biology); Cardiac function curve; Neuroscience; Computational biology; Medicine; Biology; Cardiology; Heart failure; Cell biology","score_opus":0.029298678129534718,"score_gpt":0.4505194649958089,"score_spread":0.4212207868662742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212853344","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018181304,0.0071002017,0.97174907,0.00058266695,0.0007392662,0.00038762885,0.000007696765,0.000031995052,0.0012202004],"genre_scores_gemma":[0.0034331565,0.0002874876,0.99435014,0.0011132426,0.00015682704,0.00019757524,0.000074914016,0.000030141793,0.0003565149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995065,0.0036404931,0.00032783466,0.0005208768,0.000039769893,0.00040607288],"domain_scores_gemma":[0.9979987,0.0012511987,0.00006838165,0.00040267673,0.00020560551,0.000073409625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017548711,0.0002111203,0.0008692129,0.00013423205,0.000056688583,0.0000056879526,0.000074212134,0.00030710892,0.000024075143],"category_scores_gemma":[0.002458424,0.00017791137,0.00042611398,0.00037826475,0.00014883988,0.000012620887,0.0001058676,0.0004017262,0.0000020380978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100743986,0.000049877784,0.0004248083,0.000022785243,0.00025586237,0.000108960994,0.00015434706,0.000020900896,0.84950304,0.013150728,0.00004220771,0.13616574],"study_design_scores_gemma":[0.0008287863,0.0004343345,0.00045425215,0.000029060673,0.00018927795,0.00009440826,0.00025985562,0.00035094045,0.95209724,0.027959196,0.017094785,0.00020787629],"about_ca_topic_score_codex":0.0000062367462,"about_ca_topic_score_gemma":0.0000013307965,"teacher_disagreement_score":0.13595787,"about_ca_system_score_codex":0.00007272298,"about_ca_system_score_gemma":0.00018551473,"threshold_uncertainty_score":0.7255015},"labels":[],"label_agreement":null},{"id":"W4212917357","doi":"10.1007/978-1-0716-1975-9_13","title":"Collective Learnings of Studies of Stress Granule Assembly and Composition","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Stress granule; Granule (geology); RNA; Nanotechnology; Chemistry; Computational biology; Biology; Materials science; Biochemistry","score_opus":0.030203241096915658,"score_gpt":0.42304525400753645,"score_spread":0.3928420129106208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4212917357","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9236206,0.004155839,0.07179329,0.000049899063,0.00004110418,0.0001536459,0.000017037173,0.0000022316442,0.00016636823],"genre_scores_gemma":[0.8873849,0.00018122916,0.11208602,0.000056549594,0.000011165358,0.00005553962,0.00003422194,0.000011383774,0.00017900832],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978927,0.0014107842,0.00021851824,0.00024025256,0.000073424955,0.00016433989],"domain_scores_gemma":[0.99952304,0.00010145572,0.00011495753,0.00014943768,0.00008579274,0.000025339828],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010076081,0.000085570624,0.0002598699,0.00012693177,0.00006517849,0.000001873409,0.00012583942,0.00006222105,0.0000046792943],"category_scores_gemma":[0.00029811688,0.000085129315,0.000052026164,0.0001871605,0.00021202562,0.0000012156955,0.0003437759,0.00013743977,4.529929e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014922765,0.00005379938,0.0072800056,0.000042570286,0.00008565015,0.0000042481697,0.0001990574,0.00027081813,0.9887794,0.0003351089,0.000011210535,0.0027889055],"study_design_scores_gemma":[0.0005046783,0.0010525117,0.001069924,0.000011284049,0.000009976184,0.000010021432,0.00059679605,0.00019142675,0.9952698,0.0010123195,0.00018916951,0.00008214622],"about_ca_topic_score_codex":0.000044571374,"about_ca_topic_score_gemma":0.000008077946,"teacher_disagreement_score":0.040292725,"about_ca_system_score_codex":0.000026898655,"about_ca_system_score_gemma":0.000068695255,"threshold_uncertainty_score":0.34714726},"labels":[],"label_agreement":null},{"id":"W4213024683","doi":"10.1007/978-1-0716-1975-9_9","title":"Analysis of Ribosome Profiling Data","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Ribosome profiling; Ribosome; Profiling (computer programming); Translation (biology); Computational biology; Computer science; Messenger RNA; Data mining; Biology; Genetics; RNA; Gene","score_opus":0.045113223876320226,"score_gpt":0.4023551385628142,"score_spread":0.35724191468649397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213024683","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15401098,0.0016999732,0.8432765,0.000060307688,0.00015489233,0.00020772543,0.00017959367,0.0000071613135,0.00040287044],"genre_scores_gemma":[0.21025592,0.000052130712,0.7880846,0.00026023987,0.000026144904,0.000100962505,0.0011237911,0.000022303479,0.00007389391],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967265,0.0019748448,0.00035902692,0.00059862225,0.00009677036,0.0002442176],"domain_scores_gemma":[0.9984968,0.000065221444,0.00015732572,0.0012157626,0.00002992819,0.000034978766],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002647084,0.0001334086,0.00036753152,0.00031957598,0.00006110477,0.0000039968604,0.0008944267,0.00012040572,0.00012388222],"category_scores_gemma":[0.00042719164,0.00013779137,0.00013821504,0.00073088345,0.000077054996,0.0000016706514,0.0012174568,0.00012962216,5.3507915e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004982577,0.000054494798,0.0044037686,0.0000060597445,0.00039567685,0.0000057127077,0.000014028332,0.00081444747,0.98285097,0.0017808952,0.0000070970195,0.009617035],"study_design_scores_gemma":[0.00020850127,0.00022615302,0.00020411881,0.0000014247506,0.00016859433,0.0000052621135,0.00007275905,0.0013605863,0.9882835,0.0018388391,0.007454705,0.00017554619],"about_ca_topic_score_codex":0.000035214878,"about_ca_topic_score_gemma":0.0000077770355,"teacher_disagreement_score":0.05624493,"about_ca_system_score_codex":0.00001328417,"about_ca_system_score_gemma":0.000059181482,"threshold_uncertainty_score":0.5618969},"labels":[],"label_agreement":null},{"id":"W4213304877","doi":"10.1007/978-1-0716-2075-5_14","title":"Humanization of Camelid Single-Domain Antibodies","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":24,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; National Research Council Canada","funders":"","keywords":"Single-domain antibody; Prioritization; Immunogenicity; Complementarity (molecular biology); Computational biology; Computer science; Antibody; Domain (mathematical analysis); Monoclonal antibody; Complementarity determining region; Biology; Engineering; Immunology; Genetics; Mathematics; Management science","score_opus":0.047675066971016186,"score_gpt":0.4382036851410437,"score_spread":0.3905286181700275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213304877","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72624224,0.0021651296,0.26316214,0.0011439163,0.00018854145,0.00031949862,0.000023813876,0.000020553913,0.006734185],"genre_scores_gemma":[0.21681435,0.000065921624,0.7815365,0.0006632971,0.000041786814,0.000038151265,0.00011496631,0.000022636004,0.000702342],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99795824,0.0011500244,0.00028803037,0.00022560601,0.00014885048,0.00022927557],"domain_scores_gemma":[0.9994778,0.00015562036,0.00007175293,0.00019228419,0.00006226781,0.00004027688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010160266,0.00009641982,0.00032676227,0.0002655823,0.00006642142,0.0000022829129,0.00013048349,0.00005687486,0.00041037425],"category_scores_gemma":[0.0002473535,0.00008626518,0.00008586964,0.0003637476,0.00017603648,0.0000086432665,0.0002557042,0.00025453453,0.0000022560694],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001594798,0.000167053,0.026100975,0.00004835721,0.000038165763,0.0000803135,0.00021345292,0.00003248912,0.94970477,0.013874026,0.000044274497,0.009536652],"study_design_scores_gemma":[0.0016137718,0.0025818588,0.01155325,0.000037017646,0.000040025356,0.00026763702,0.0006952545,0.0004019621,0.88138074,0.035291716,0.065837294,0.0002994694],"about_ca_topic_score_codex":0.00010727754,"about_ca_topic_score_gemma":0.0000052340624,"teacher_disagreement_score":0.5183744,"about_ca_system_score_codex":0.000053915403,"about_ca_system_score_gemma":0.000052248593,"threshold_uncertainty_score":0.44933105},"labels":[],"label_agreement":null},{"id":"W4213308630","doi":"10.1007/978-1-0716-2075-5_12","title":"Facile Affinity Maturation of Single-Domain Antibodies Using Next-Generation DNA Sequencing","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Natural Sciences and Engineering Research Council of Canada; National Research Council Canada","funders":"","keywords":"Single-domain antibody; Phage display; Panning (audio); Complementarity determining region; Computational biology; Mutagenesis; Phagemid; Biology; DNA sequencing; Complementarity (molecular biology); DNA; Molecular biology; Affinity maturation; Bacteriophage; Genetics; Antibody; Gene; Peptide sequence; Mutation; Escherichia coli","score_opus":0.18955794824210376,"score_gpt":0.44078284967544445,"score_spread":0.2512249014333407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213308630","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8056133,0.0006773346,0.19248521,0.00029541535,0.00016154097,0.0002198651,0.000022034608,0.000011923702,0.0005133727],"genre_scores_gemma":[0.39182603,0.000022149594,0.60761535,0.00025422822,0.000057307534,0.000017082182,0.00012270334,0.000012185513,0.000072928604],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99729425,0.0016268743,0.0003659186,0.00027247032,0.00018297124,0.00025750036],"domain_scores_gemma":[0.9994337,0.00014418316,0.00011282177,0.00019050526,0.00007311979,0.000045663674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013776587,0.00012515955,0.0003590924,0.00026457765,0.00012859446,0.000008322836,0.00010550834,0.00008522407,0.0001803415],"category_scores_gemma":[0.00028592566,0.00011486208,0.00009947339,0.00034006828,0.00013916276,0.000035119505,0.00019153491,0.00029105204,0.0000011180996],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016343429,0.00006980472,0.00223808,0.000048611335,0.000033564116,0.00005382227,0.0002726915,0.00045309655,0.98978317,0.0020224303,0.000010286229,0.0048510036],"study_design_scores_gemma":[0.00041992878,0.00049651373,0.00046624136,0.000018522767,0.000021545442,0.00014703846,0.0004675675,0.009082724,0.98397565,0.0032381883,0.0015277123,0.00013839125],"about_ca_topic_score_codex":0.00022789916,"about_ca_topic_score_gemma":0.000013400852,"teacher_disagreement_score":0.41513017,"about_ca_system_score_codex":0.0001877181,"about_ca_system_score_gemma":0.0001330226,"threshold_uncertainty_score":0.46839398},"labels":[],"label_agreement":null},{"id":"W4213317931","doi":"10.1007/978-1-0716-1960-5_10","title":"In Silico Models for Developmental Toxicity","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Effects and risks of endocrine disrupting chemicals","field":"Environmental Science","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Computer science; In silico; Domain (mathematical analysis); Basis (linear algebra); Statistical model; Machine learning; Data mining; Artificial intelligence; Biology; Mathematics","score_opus":0.023665910287238693,"score_gpt":0.4331474821317025,"score_spread":0.4094815718444638,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4213317931","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70388734,0.00007463644,0.29299635,0.00024959352,0.00010031356,0.00032263395,0.000008964138,0.000011946341,0.0023482486],"genre_scores_gemma":[0.17169699,0.0000039053557,0.826986,0.0009063505,0.0000063512975,0.00028151885,0.000010810404,0.000011442741,0.00009658782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986463,0.00047939224,0.00019653702,0.00032556287,0.0000592445,0.00029295776],"domain_scores_gemma":[0.99958706,0.00023486877,0.000037071957,0.00010936852,0.0000017079865,0.000029941526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010948962,0.00009593881,0.00016982366,0.000050395574,0.000056728226,0.0000031570628,0.00024066195,0.000041055493,0.0003308717],"category_scores_gemma":[0.00018636763,0.00009053519,0.000050574636,0.00019082891,0.00007300558,0.00002790332,0.00045652423,0.00016299004,0.0000030940107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021652273,0.00008898706,0.0049726004,0.0000036229137,0.0000032524085,0.000015469062,0.000119269935,0.009458503,0.9754931,0.0010837025,0.00011146746,0.008628376],"study_design_scores_gemma":[0.0012105759,0.00022028775,0.00079476374,0.000004213296,0.000005364529,0.00003395958,0.00017684128,0.021403482,0.81898254,0.13548735,0.021276029,0.0004045804],"about_ca_topic_score_codex":0.00024077423,"about_ca_topic_score_gemma":0.00003309458,"teacher_disagreement_score":0.5339897,"about_ca_system_score_codex":0.00019905604,"about_ca_system_score_gemma":0.000009074022,"threshold_uncertainty_score":0.3691918},"labels":[],"label_agreement":null},{"id":"W4214486869","doi":"10.1007/978-1-0716-2051-9_14","title":"Super-Resolution Radial Fluctuations (SRRF) Microscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Workflow; Resolution (logic); Computer science; Software; Microscopy; Plug-in; Focus (optics); Superresolution; Microscope; Sample (material); Super-resolution microscopy; Fluorescence microscope; Artificial intelligence; Computer vision; Computer graphics (images); Nanotechnology; Optics; Materials science; Fluorescence; Physics; Image (mathematics); Scanning confocal electron microscopy; Programming language","score_opus":0.013843398351680383,"score_gpt":0.40078243836611477,"score_spread":0.3869390400144344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214486869","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04161212,0.001571272,0.95540875,0.00021514772,0.00040932404,0.0003827528,0.00005492617,0.00004589418,0.0002998407],"genre_scores_gemma":[0.018138098,0.00008941711,0.97983474,0.0009003499,0.00007249595,0.00034688457,0.00038292838,0.00004532401,0.00018978183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970564,0.0013952971,0.0003478824,0.000649831,0.000088283516,0.00046227066],"domain_scores_gemma":[0.99919146,0.00004446912,0.00009271121,0.0005639893,0.000047354515,0.000059984235],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009399712,0.00021975118,0.00024024313,0.00019594484,0.00020421225,0.000011184179,0.00047071328,0.00020041483,0.00010899392],"category_scores_gemma":[0.00039318856,0.00025405808,0.00012042804,0.0003345906,0.00023486902,0.0000036836338,0.0005469154,0.00034996364,0.0000035412306],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000071914226,0.000069845984,0.000765135,0.000003623709,0.000015696349,0.0000080205855,0.000048726302,0.00042417325,0.9920012,0.0013202841,0.000386112,0.0048853126],"study_design_scores_gemma":[0.00040109974,0.00041673516,0.00013806317,0.0000028398692,0.000008932681,0.000038221333,0.00006514217,0.00020921069,0.92010504,0.0041290615,0.07421565,0.00026998227],"about_ca_topic_score_codex":0.000046470905,"about_ca_topic_score_gemma":0.000013039046,"teacher_disagreement_score":0.07382954,"about_ca_system_score_codex":0.00010909656,"about_ca_system_score_gemma":0.000113296235,"threshold_uncertainty_score":0.9999912},"labels":[],"label_agreement":null},{"id":"W4214530960","doi":"10.1007/978-1-0716-2051-9_1","title":"Fluorescence Microscopy: A Field Guide for Biologists","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Fluorescence microscope; Mindset; Microscopy; Nanotechnology; Photoactivated localization microscopy; Fluorescence; Computer science; Materials science; Super-resolution microscopy; Optics; Artificial intelligence; Physics","score_opus":0.017230466781648614,"score_gpt":0.43037662165327134,"score_spread":0.4131461548716227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214530960","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008799395,0.0015668711,0.9879048,0.00030311637,0.0003423464,0.00071307016,0.00007120639,0.000048849553,0.0002503443],"genre_scores_gemma":[0.004316043,0.000104600455,0.9919686,0.0020559323,0.00005749853,0.0009862052,0.00019035283,0.000045428977,0.00027536158],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99727446,0.0008358087,0.0004272057,0.0008301986,0.00006362783,0.0005687023],"domain_scores_gemma":[0.99893796,0.00013562775,0.00014148148,0.00066230644,0.00006427253,0.000058348483],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013548855,0.0002586458,0.0003151463,0.00015225912,0.00016053393,0.000011007645,0.0007358793,0.00024877067,0.000036921752],"category_scores_gemma":[0.0010826671,0.0002752454,0.00016592987,0.00024590723,0.0001994562,0.0000026840942,0.00072037574,0.00029127416,0.0000011102146],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018277498,0.00006279176,0.0019040359,0.000011428209,0.000018136196,0.000007953318,0.000018605153,0.000047527,0.9794657,0.0011442984,0.0016136384,0.015523096],"study_design_scores_gemma":[0.00038762408,0.0010430311,0.000034823,0.0000052493524,0.0000064679484,0.00002454122,0.000037984602,0.00006535123,0.8428025,0.0046389215,0.15067767,0.00027583062],"about_ca_topic_score_codex":0.00004494773,"about_ca_topic_score_gemma":0.000011131454,"teacher_disagreement_score":0.14906403,"about_ca_system_score_codex":0.000072604416,"about_ca_system_score_gemma":0.00010777105,"threshold_uncertainty_score":0.99996996},"labels":[],"label_agreement":null},{"id":"W4214550186","doi":"10.1007/978-1-0716-2051-9_3","title":"Optimizing Long-Term Live Cell Imaging","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"Canadian Institutes of Health Research","keywords":"Live cell imaging; Photobleaching; Microscopy; Fluorescence microscope; Fluorescence recovery after photobleaching; Phototoxicity; Fluorescence; Cell; Cell biology; Fluorescence-lifetime imaging microscopy; Intracellular; Chemistry; Biophysics; Nanotechnology; Biology; Materials science; Optics; Physics; Biochemistry","score_opus":0.011554964307153486,"score_gpt":0.38160392982512537,"score_spread":0.3700489655179719,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214550186","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04486233,0.004552514,0.9494079,0.000067394285,0.00021045904,0.00029099925,0.00001426314,0.000044203487,0.0005499401],"genre_scores_gemma":[0.042082958,0.0001288916,0.9563742,0.0008457872,0.00004125595,0.00020998363,0.00013027,0.00005389902,0.000132732],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973253,0.001117503,0.00030666307,0.0006905538,0.000075430966,0.000484521],"domain_scores_gemma":[0.9991897,0.0000347057,0.00012630454,0.0005532968,0.00003806518,0.000057973557],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008685178,0.00023386643,0.00024655685,0.00015649838,0.00013311257,0.000012625533,0.00054028473,0.0001188823,0.00009033415],"category_scores_gemma":[0.00011316367,0.00026707439,0.00012021384,0.00019935449,0.00016843583,0.000003335872,0.00097108324,0.00038079466,0.000002875047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004359746,0.00006663838,0.011950503,0.00000936033,0.000010199061,0.00006267681,0.00007068994,0.0002820043,0.9782404,0.000103925384,0.00004453485,0.009115513],"study_design_scores_gemma":[0.0003513268,0.00022784449,0.00023337197,0.0000059007257,0.000009032289,0.000052725678,0.00008989039,0.00011485842,0.994603,0.0007884033,0.003210198,0.0003134454],"about_ca_topic_score_codex":0.00001571448,"about_ca_topic_score_gemma":0.0000033400818,"teacher_disagreement_score":0.016362647,"about_ca_system_score_codex":0.00007626698,"about_ca_system_score_gemma":0.000063007596,"threshold_uncertainty_score":0.9999781},"labels":[],"label_agreement":null},{"id":"W4214554756","doi":"10.1007/978-1-0716-2144-8_7","title":"Detection of ASC Oligomerization by Western Blotting","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"Canadian Institutes of Health Research","keywords":"Pyroptosis; Inflammasome; Caspase 1; Signal transducing adaptor protein; Death domain; Blot; Cell biology; AIM2; Chemistry; Caspase; Pyrin domain; Programmed cell death; Apoptosis; Signal transduction; Biology; Receptor; Biochemistry","score_opus":0.007688050060408743,"score_gpt":0.3248621011440137,"score_spread":0.31717405108360497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214554756","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48279184,0.0011993548,0.5154752,0.000030552324,0.00014313344,0.00010874889,0.00000805854,0.0000056797035,0.0002374424],"genre_scores_gemma":[0.9534497,0.00009044841,0.045541286,0.00034305156,0.000022292252,0.000105473024,0.0002667559,0.000029988736,0.00015096717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823874,0.0009428444,0.0002843434,0.00027646963,0.00005692039,0.00020070658],"domain_scores_gemma":[0.99955875,0.000017914437,0.00013447496,0.00024235553,0.000029704088,0.000016829277],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007230644,0.00011065743,0.00016757533,0.000102843784,0.00006419795,0.0000033524502,0.00018419142,0.000107977765,0.00002090953],"category_scores_gemma":[0.0001499852,0.00012644718,0.00007589097,0.0002143566,0.00006365709,0.0000017946227,0.00021164818,0.0001311839,6.843248e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045020188,0.000039722232,0.0033277776,0.000007086342,0.00002579916,9.0344446e-7,0.000047800222,0.00024423865,0.97321427,0.00004983173,0.0000070733236,0.022990504],"study_design_scores_gemma":[0.0004125099,0.00036950546,0.00028586504,0.0000016964767,0.000007931521,0.000007645816,0.0001247283,0.000098055025,0.9767771,0.00024497876,0.021538254,0.00013178097],"about_ca_topic_score_codex":0.000035955312,"about_ca_topic_score_gemma":0.0000059506724,"teacher_disagreement_score":0.4706579,"about_ca_system_score_codex":0.00001579938,"about_ca_system_score_gemma":0.000025528938,"threshold_uncertainty_score":0.5156366},"labels":[],"label_agreement":null},{"id":"W4214564475","doi":"10.1007/978-1-0716-2051-9_4","title":"Monitoring Transmembrane and Peripheral Membrane Protein Interactions by Förster Resonance Energy Transfer Using Fluorescence Lifetime Imaging Microscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University; St. Michael's Hospital","funders":"Canadian Institutes of Health Research","keywords":"Caveolae; Förster resonance energy transfer; Transmembrane protein; Membrane; Cell biology; Membrane protein; Biophysics; Endocytic cycle; Peripheral membrane protein; Integral membrane protein; Chemistry; Fluorescence; Biology; Endocytosis; Biochemistry; Receptor","score_opus":0.01048776986692767,"score_gpt":0.3303541021550438,"score_spread":0.3198663322881161,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214564475","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41142815,0.01520833,0.57273114,0.00013349553,0.00020886248,0.00017728044,0.000030971245,0.000014598948,0.000067184585],"genre_scores_gemma":[0.8107204,0.0004981245,0.18741943,0.00040471717,0.00012557846,0.00023075848,0.000088392124,0.0000753432,0.000437261],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99758816,0.0008274792,0.0003520001,0.0007036627,0.00009821046,0.0004304859],"domain_scores_gemma":[0.99950004,0.000027015705,0.000052559768,0.00029904253,0.0000418826,0.00007945846],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005264677,0.00026960205,0.0002895496,0.0001008305,0.00020358147,0.000030740764,0.00027164433,0.00011180414,0.000060869006],"category_scores_gemma":[0.000043341435,0.00029840594,0.00010443128,0.00019951256,0.00018702631,0.000009566087,0.00017028049,0.00030786658,1.9873039e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017215805,0.00006999893,0.00090736785,0.00003322277,0.000025448855,0.000020728166,0.00011165256,0.000095163996,0.9833289,0.00005558459,0.0000062690356,0.015173502],"study_design_scores_gemma":[0.0006591415,0.00012439062,0.00002371128,0.000029713134,0.00001869305,0.0001273437,0.00010344533,0.0007818336,0.9739502,0.00014634788,0.023712855,0.0003223427],"about_ca_topic_score_codex":0.00016432184,"about_ca_topic_score_gemma":0.0000072096386,"teacher_disagreement_score":0.39929223,"about_ca_system_score_codex":0.000047416168,"about_ca_system_score_gemma":0.00007405985,"threshold_uncertainty_score":0.99994683},"labels":[],"label_agreement":null},{"id":"W4214565844","doi":"10.1007/978-1-0716-2051-9_15","title":"Sample Preparation for Multicolor STED Microscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"STED microscopy; Microscopy; Fluorophore; Super-resolution microscopy; Confocal microscopy; Light sheet fluorescence microscopy; Bright-field microscopy; Optics; Stimulated emission; Microscope; Nanotechnology; Materials science; Scanning confocal electron microscopy; Physics; Laser; Fluorescence","score_opus":0.020019833542679805,"score_gpt":0.45146181882723385,"score_spread":0.431441985284554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214565844","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046279512,0.0005738942,0.9517137,0.000077148245,0.00021198136,0.0009304621,0.00013445731,0.00003636936,0.000042505435],"genre_scores_gemma":[0.009163307,0.000023983168,0.98807967,0.00065997086,0.000035601806,0.0013645105,0.0005484927,0.000040298062,0.000084149084],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99784434,0.00080962584,0.00031761843,0.0006030546,0.00005276957,0.0003725763],"domain_scores_gemma":[0.99922365,0.00011576583,0.000121284116,0.00044043435,0.000058907775,0.00003995443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009444652,0.00018406221,0.0002314155,0.00011643179,0.00013843545,0.000009390022,0.00034682555,0.00016859735,0.000028153081],"category_scores_gemma":[0.00073991355,0.00020727336,0.00010780258,0.000178305,0.000119032404,0.0000025948489,0.0003402997,0.00016771966,5.7111515e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003307369,0.00007963964,0.00086402404,0.0000093819845,0.00001792673,0.0000014290201,0.000043950302,0.00030420173,0.9919671,0.001037928,0.00014809592,0.0051956326],"study_design_scores_gemma":[0.000559742,0.0009885496,0.000043970726,0.000002427062,0.000008338895,0.000007817133,0.000045025165,0.0007597452,0.9234305,0.0042941933,0.06964309,0.00021663304],"about_ca_topic_score_codex":0.000028135171,"about_ca_topic_score_gemma":0.000010394279,"teacher_disagreement_score":0.069494985,"about_ca_system_score_codex":0.00007292745,"about_ca_system_score_gemma":0.00007380081,"threshold_uncertainty_score":0.84523624},"labels":[],"label_agreement":null},{"id":"W4214581342","doi":"10.1007/978-1-0716-2051-9_17","title":"Measuring the Lateral Diffusion of Plasma Membrane Receptors Using Raster Image Correlation Spectroscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Raster graphics; Diffusion; Materials science; Microscope; Chemistry; Optics; Computer science; Artificial intelligence; Physics","score_opus":0.020158368805118704,"score_gpt":0.3340586311482781,"score_spread":0.3139002623431594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214581342","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8582588,0.00011079201,0.14038187,0.000053002233,0.00077622355,0.00023466878,0.0000098593755,0.0000064050632,0.00016838082],"genre_scores_gemma":[0.7387837,0.000023614097,0.26066276,0.00016852055,0.00010719396,0.000036294212,0.00009553541,0.000033881068,0.00008844451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99749327,0.0014086679,0.00034094354,0.00036871852,0.000117337455,0.00027104886],"domain_scores_gemma":[0.9993531,0.00003944845,0.00016530462,0.00037247525,0.000038507813,0.00003114199],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000915629,0.00017449865,0.00024329642,0.00010637715,0.00012467017,0.000008188894,0.00029689536,0.00013523179,0.000111950205],"category_scores_gemma":[0.00010766102,0.00013729108,0.00012568862,0.00020558575,0.00013888384,0.0000034460884,0.0003602963,0.0002700171,5.757489e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108600594,0.000036018497,0.0054129683,0.000010173801,0.000022487877,0.0000031200095,0.0001097855,0.0005322604,0.9923239,0.000053498352,0.0000065260597,0.0013806596],"study_design_scores_gemma":[0.0005902353,0.0002109861,0.00047573875,0.0000051753113,0.000033924574,0.000046253987,0.000090934525,0.0007256105,0.9957463,0.00013347199,0.0017854322,0.00015593003],"about_ca_topic_score_codex":0.000050156148,"about_ca_topic_score_gemma":0.000005461422,"teacher_disagreement_score":0.12028089,"about_ca_system_score_codex":0.00003666965,"about_ca_system_score_gemma":0.000048681013,"threshold_uncertainty_score":0.5598568},"labels":[],"label_agreement":null},{"id":"W4214594048","doi":"10.1007/978-1-0716-2144-8_9","title":"Intracellular Potassium Ion Measurements by Inductively Coupled Plasma Optical Emission Spectrometer (ICP-OES)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Intracellular; Inductively coupled plasma atomic emission spectroscopy; Inductively coupled plasma; Extracellular; Biophysics; Inflammasome; Depolarization; Efflux; Potassium; Chemistry; Ion; Analytical Chemistry (journal); Plasma; Biochemistry; Biology; Chromatography; Physics; Receptor","score_opus":0.020038434312944466,"score_gpt":0.32171833540776135,"score_spread":0.3016799010948169,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214594048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7214378,0.0016966321,0.27468145,0.0003208733,0.00054068177,0.0003897253,0.000017429587,0.0000193381,0.0008960508],"genre_scores_gemma":[0.7370118,0.0001392869,0.25950938,0.00097136764,0.00013005846,0.00037397377,0.0010840519,0.00011477334,0.00066533766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962396,0.001658258,0.00048339204,0.0007810552,0.00021940684,0.0006182897],"domain_scores_gemma":[0.9991349,0.000035475467,0.00015472667,0.00051443384,0.00006723423,0.00009322256],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018333182,0.00032300054,0.0003703597,0.00018414836,0.00017828125,0.000018329016,0.0004924883,0.0003265559,0.0001943661],"category_scores_gemma":[0.00039809966,0.0003306586,0.00017516434,0.00030706316,0.00016360788,0.0000053272415,0.0005469482,0.00053397316,0.0000062579047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027546278,0.00020538965,0.0008127814,0.000007985813,0.000102334765,0.000015716672,0.000049314047,0.000075024225,0.99264354,0.00020921812,0.00035808614,0.005245146],"study_design_scores_gemma":[0.0013707383,0.00083544693,0.000107400374,0.000004290903,0.000026603459,0.000032977186,0.00016472719,0.00031357174,0.970792,0.0007914306,0.02516309,0.00039773656],"about_ca_topic_score_codex":0.000024046429,"about_ca_topic_score_gemma":0.0000021372693,"teacher_disagreement_score":0.024805004,"about_ca_system_score_codex":0.0001032446,"about_ca_system_score_gemma":0.00010027371,"threshold_uncertainty_score":0.9999145},"labels":[],"label_agreement":null},{"id":"W4214598255","doi":"10.1007/978-1-0716-2047-2_17","title":"Sensing Metal Ions with Phosphorothioate-Modified DNAzymes","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Deoxyribozyme; Combinatorial chemistry; Bioanalysis; Nucleic acid; DNA; Chemistry; Metal ions in aqueous solution; Substrate (aquarium); Ribozyme; Bioinorganic chemistry; Metal; Nanotechnology; Stereochemistry; Materials science; Biochemistry; Chromatography; Organic chemistry; Biology; RNA","score_opus":0.016103772666585442,"score_gpt":0.3677511142715794,"score_spread":0.351647341604994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214598255","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16135569,0.000745395,0.83624905,0.0002664382,0.000101615435,0.00023474952,0.000022465589,0.00005737107,0.0009671972],"genre_scores_gemma":[0.43754435,0.000033954435,0.5614358,0.0006154078,0.000028257311,0.000028412633,0.00011989634,0.000029043058,0.00016486131],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99716777,0.0012939338,0.0003093927,0.00068830396,0.000121746525,0.0004188691],"domain_scores_gemma":[0.999139,0.000043967917,0.0001401488,0.00055453455,0.00006056911,0.00006174765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010574585,0.00025945113,0.00035480835,0.00018299674,0.00019398876,0.0000125235065,0.00026466182,0.00016122752,0.000008899957],"category_scores_gemma":[0.00014927621,0.00022505628,0.00015436193,0.00044817314,0.0002275527,0.0000022634001,0.00037383253,0.00033367815,5.3659005e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013196611,0.00005922048,0.0002777808,0.0000031595346,0.00009761437,0.000048549926,0.000019835252,0.00031515714,0.98392826,0.0007851416,0.00003718104,0.014296128],"study_design_scores_gemma":[0.00042358902,0.00058634515,0.000042100804,0.0000046612854,0.000047437738,0.00014255731,0.00013725022,0.00033633306,0.9808821,0.0018600009,0.015184849,0.0003527405],"about_ca_topic_score_codex":0.00005699361,"about_ca_topic_score_gemma":0.000031365096,"teacher_disagreement_score":0.27618867,"about_ca_system_score_codex":0.00004676251,"about_ca_system_score_gemma":0.00007130596,"threshold_uncertainty_score":0.91775286},"labels":[],"label_agreement":null},{"id":"W4214607780","doi":"10.1007/978-1-0716-2051-9_11","title":"Quantifiable Intravital Light Sheet Microscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Neurological Disorders and Stroke","keywords":"Hindbrain; Light sheet fluorescence microscopy; Midbrain; Zebrafish; Computer vision; Segmentation; Microscopy; Fluorescence microscope; Artificial intelligence; Computer science; Anatomy; Biology; Optics; Neuroscience; Cell biology; Fluorescence; Physics; Embryo; Central nervous system","score_opus":0.01089558054094253,"score_gpt":0.39494570838710147,"score_spread":0.38405012784615894,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214607780","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.044408537,0.0021314994,0.9515174,0.00022136254,0.00047889433,0.00036992595,0.000043592318,0.000051114075,0.00077767216],"genre_scores_gemma":[0.016723445,0.0000722601,0.98134667,0.0009457431,0.00005122874,0.0002884126,0.00020219728,0.000059682257,0.00031038164],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970072,0.00117726,0.00038269407,0.00078609027,0.00008907923,0.0005577019],"domain_scores_gemma":[0.99905425,0.00003345318,0.00011722193,0.0006869286,0.000040979223,0.00006716299],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011563968,0.00026293515,0.00031129902,0.00017887312,0.00015122454,0.000015661899,0.0006296776,0.00021662336,0.00011411236],"category_scores_gemma":[0.00025690277,0.00028976117,0.00012217423,0.00034323486,0.00018286545,0.0000035848257,0.00081527943,0.00041195654,0.000004449465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008989639,0.00009709076,0.0015310297,0.000007359174,0.00002083993,0.000026009036,0.00003450663,0.000119201606,0.9923029,0.0015463078,0.0006818409,0.0035430342],"study_design_scores_gemma":[0.00030222523,0.0004924384,0.0000317794,0.000004637966,0.00000655614,0.000050100432,0.000065563276,0.000039258764,0.8955948,0.0038919116,0.09922024,0.00030049914],"about_ca_topic_score_codex":0.000030681655,"about_ca_topic_score_gemma":0.000006629097,"teacher_disagreement_score":0.0985384,"about_ca_system_score_codex":0.0000735164,"about_ca_system_score_gemma":0.00008928282,"threshold_uncertainty_score":0.9999555},"labels":[],"label_agreement":null},{"id":"W4214619389","doi":"10.1007/978-1-0716-2144-8_6","title":"Measurement of Inflammasome-Induced Mitochondrial Dysfunction by Flow Cytometry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Inflammasome; Reactive oxygen species; Mitochondrion; Mitochondrial ROS; Cell biology; Flow cytometry; Chemistry; Biology; Biochemistry; Immunology; Receptor","score_opus":0.01440050635420323,"score_gpt":0.3172416244170827,"score_spread":0.3028411180628795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214619389","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40044886,0.0032370654,0.5936778,0.00012353777,0.001219997,0.00044683705,0.000028877947,0.000015466689,0.00080157246],"genre_scores_gemma":[0.7726058,0.00013366944,0.22517274,0.0006233644,0.00016313248,0.0005035549,0.0005237517,0.000090024194,0.0001839746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99679816,0.0015805481,0.00050880347,0.00050758664,0.00022827565,0.00037662013],"domain_scores_gemma":[0.9991174,0.000020142093,0.00019135949,0.0005146014,0.00011300965,0.000043518212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001507276,0.00022248676,0.00032981343,0.0002397536,0.000094442716,0.0000061824553,0.00037118586,0.00021992764,0.00009011743],"category_scores_gemma":[0.00048578373,0.00024277117,0.00018534805,0.000411802,0.00008397602,0.000003233247,0.00037249553,0.00028656292,0.0000021066428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027608758,0.00011750715,0.0009735558,0.000013390133,0.00009683903,0.0000032743114,0.000037514623,0.00027254075,0.9765038,0.00008395459,0.00034604126,0.021275498],"study_design_scores_gemma":[0.0014704863,0.00093161396,0.0001681916,0.0000046095197,0.00002046968,0.000008500618,0.00014557906,0.00010637928,0.95970666,0.0003467045,0.03683207,0.00025870884],"about_ca_topic_score_codex":0.00004322087,"about_ca_topic_score_gemma":0.000008972936,"teacher_disagreement_score":0.37215692,"about_ca_system_score_codex":0.000074831274,"about_ca_system_score_gemma":0.00012159129,"threshold_uncertainty_score":0.9899921},"labels":[],"label_agreement":null},{"id":"W4214623878","doi":"10.1007/7651_2021_456","title":"Immunoassay for Quantitative Detection of Antibody Transcytosis Across the Blood-Brain Barrier In Vitro","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Transcytosis; Chemistry; Chromatography; In vitro; Immunoassay; Tandem mass spectrometry; Antibody; Blood–brain barrier; Mass spectrometry; Biology; Biochemistry; Immunology; Receptor","score_opus":0.02892469452740917,"score_gpt":0.4261087804654517,"score_spread":0.39718408593804255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214623878","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48550877,0.0006412761,0.51244354,0.0005253591,0.0002889669,0.00048474275,0.00005267536,0.000010186992,0.00004449785],"genre_scores_gemma":[0.75336635,0.000044979093,0.24404152,0.0017962918,0.000025220068,0.0004957298,0.00010466405,0.000028749717,0.000096516065],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962465,0.0027040644,0.0003919481,0.00030883757,0.000065952474,0.0002826614],"domain_scores_gemma":[0.99843377,0.0011022025,0.000116938616,0.00026919585,0.00005280808,0.0000251064],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002690989,0.00012976326,0.00044300803,0.00017456531,0.000103075814,0.000002089683,0.00013092009,0.00013314455,0.000046509667],"category_scores_gemma":[0.00085357117,0.00010203786,0.00019235341,0.00048710298,0.00020536002,0.000012350095,0.000064449465,0.00039137102,5.053445e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0018090119,0.00013713204,0.000470865,0.000034003,0.00007801749,0.00001011889,0.001046578,0.00008051769,0.98634773,0.0007731295,0.0000020572904,0.00921083],"study_design_scores_gemma":[0.0025655744,0.001775615,0.0017595341,0.000007717317,0.00004790309,0.00004319124,0.0014231808,0.0008721368,0.98567337,0.0021324453,0.0035911512,0.00010817556],"about_ca_topic_score_codex":0.00012077244,"about_ca_topic_score_gemma":0.000022359254,"teacher_disagreement_score":0.268402,"about_ca_system_score_codex":0.000043768312,"about_ca_system_score_gemma":0.000053876785,"threshold_uncertainty_score":0.41609833},"labels":[],"label_agreement":null},{"id":"W4214637092","doi":"10.1007/978-1-0716-2051-9_5","title":"Bimolecular Fluorescence Complementation to Visualize Protein–Protein Interactions in Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Canadian Institutes of Health Research","keywords":"Bimolecular fluorescence complementation; Complementation; Protein–protein interaction; Fluorescent protein; Fluorescence; Fluorescence microscope; Biophysics; Chemistry; Protein-fragment complementation assay; Green fluorescent protein; Cell biology; Computational biology; Biology; Biochemistry; Physics; Gene; Optics","score_opus":0.02295899665274958,"score_gpt":0.4463645626941503,"score_spread":0.4234055660414007,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214637092","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17109221,0.00015027751,0.8269095,0.00019382304,0.00013291846,0.001334648,0.000035068733,0.00003258581,0.00011898531],"genre_scores_gemma":[0.107175626,0.00000838074,0.8900618,0.00072808407,0.000023833185,0.0016879521,0.00014991398,0.000050106184,0.000114283495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99600774,0.0019277367,0.00054214423,0.00084865803,0.00013566062,0.0005380694],"domain_scores_gemma":[0.9991135,0.000026458265,0.00014129787,0.00057601114,0.000057655983,0.00008508737],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011237874,0.0002773368,0.00030445546,0.00042727272,0.0001136858,0.000016468646,0.0005592244,0.00009927974,0.000103237304],"category_scores_gemma":[0.00025019696,0.00033119452,0.000098001095,0.00069867296,0.000113513095,0.0000067352935,0.00078255526,0.00041565477,0.0000057065427],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013609469,0.00014802799,0.0007288962,0.000011323565,0.000011059083,0.000029548422,0.000081831124,0.0005190685,0.99206394,0.0011972211,0.000053373667,0.005019589],"study_design_scores_gemma":[0.00044556343,0.0005352946,0.00009082148,0.000023707918,0.000003936261,0.000010845939,0.00012192944,0.00014914454,0.97800595,0.0026762865,0.017593171,0.00034337523],"about_ca_topic_score_codex":0.00018081277,"about_ca_topic_score_gemma":0.000067888686,"teacher_disagreement_score":0.063916594,"about_ca_system_score_codex":0.00018350815,"about_ca_system_score_gemma":0.00008475401,"threshold_uncertainty_score":0.999914},"labels":[],"label_agreement":null},{"id":"W4214655503","doi":"10.1007/978-1-0716-2051-9_7","title":"Quantifying Endothelial Transcytosis with Total Internal Reflection Fluorescence Microscopy (TIRF)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Public Health Ontario; Muscular Dystrophy Canada; University of Toronto","funders":"","keywords":"Transcytosis; Total internal reflection fluorescence microscope; Biophysics; Fluorescence microscope; Exocytosis; Chemistry; Microscopy; Cell biology; Biology; Fluorescence; Membrane; Cell; Endocytosis; Biochemistry; Optics; Pathology; Medicine; Physics","score_opus":0.02459472315899145,"score_gpt":0.38079045358986,"score_spread":0.35619573043086855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214655503","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42404902,0.0010766911,0.57400525,0.000058456644,0.00029586782,0.0001651645,0.00002531821,0.000016641408,0.00030759972],"genre_scores_gemma":[0.7011322,0.00010256612,0.29779226,0.00032723093,0.00010020318,0.00015389935,0.00011563775,0.000045421853,0.00023061167],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977478,0.00078938133,0.00030018287,0.00064866984,0.00011480149,0.00039921506],"domain_scores_gemma":[0.99942195,0.000031943666,0.0001072028,0.0003292283,0.000050229875,0.00005944078],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007368025,0.00023096988,0.0002576645,0.0001455838,0.00015254655,0.000020623016,0.00032443771,0.00014563267,0.000095071046],"category_scores_gemma":[0.00008929935,0.00022252278,0.00012777178,0.0002818751,0.00015032347,0.0000035847847,0.00020354474,0.00035314966,0.000001977424],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005742417,0.00009323492,0.0029036752,0.000021028056,0.000052397812,0.00003328043,0.000118872915,0.00018232579,0.9857905,0.00015223821,0.000015513808,0.010062723],"study_design_scores_gemma":[0.0008412553,0.0010145456,0.00010646352,0.000010605084,0.000023156694,0.00032132806,0.0001986441,0.000115301635,0.9886961,0.00025176277,0.00813613,0.0002847042],"about_ca_topic_score_codex":0.00011491797,"about_ca_topic_score_gemma":0.000052577863,"teacher_disagreement_score":0.27708316,"about_ca_system_score_codex":0.000047327983,"about_ca_system_score_gemma":0.00011363713,"threshold_uncertainty_score":0.9074215},"labels":[],"label_agreement":null},{"id":"W4214673635","doi":"10.1007/978-1-0716-2051-9_10","title":"Intravital Microscopy Techniques to Image Wound Healing in Mouse Skin","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Intravital microscopy; Wound healing; Biomedical engineering; Pathology; Anatomy; Medicine; Surgery; Radiology; Microcirculation","score_opus":0.010150489539636013,"score_gpt":0.400569146567012,"score_spread":0.390418657027376,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214673635","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13984384,0.00043540547,0.85845184,0.00021492167,0.00010692874,0.000673666,0.00006747555,0.000055963876,0.00014998224],"genre_scores_gemma":[0.016080847,0.000053433312,0.9809849,0.0019216336,0.000041206218,0.0006175147,0.00013582138,0.0000676045,0.00009702354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965897,0.001255468,0.00049880025,0.00086825655,0.000092047565,0.0006956777],"domain_scores_gemma":[0.99909323,0.000037183363,0.00010195546,0.00063842896,0.00004419931,0.00008498384],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017600339,0.00029539783,0.00037510897,0.00040470003,0.000098836885,0.00001936212,0.0006345451,0.0002463973,0.00003007599],"category_scores_gemma":[0.0003238381,0.0003458193,0.00010010511,0.0004923731,0.00015036592,0.0000054181805,0.0010576822,0.0005296391,0.0000020759398],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013126787,0.00012810052,0.0009263618,0.000009645392,0.000008908779,0.00003475838,0.0001076282,0.00004411003,0.99126184,0.00033670504,0.00014501001,0.006865652],"study_design_scores_gemma":[0.00030039548,0.0006011674,0.000050758103,0.000009270361,0.0000027393085,0.000028791304,0.00015243112,0.000019729445,0.9698298,0.0018423322,0.026803944,0.00035863355],"about_ca_topic_score_codex":0.00010695282,"about_ca_topic_score_gemma":0.000060928196,"teacher_disagreement_score":0.123762995,"about_ca_system_score_codex":0.00018392019,"about_ca_system_score_gemma":0.00008544418,"threshold_uncertainty_score":0.9998994},"labels":[],"label_agreement":null},{"id":"W4214698396","doi":"10.1007/978-1-0716-2051-9_8","title":"Measurement of Minute Cellular Forces by Traction Force Microscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Tractive force; Traction (geology); Fluorescence microscope; Confocal microscopy; Microscopy; Extracellular matrix; Fibronectin; Nanotechnology; Confocal; Microscope; Mechanobiology; Biophysics; Chemistry; Cell biology; Materials science; Biology; Engineering; Physics; Fluorescence; Optics; Mechanical engineering","score_opus":0.018808621540771724,"score_gpt":0.34973562333874436,"score_spread":0.33092700179797263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214698396","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15717657,0.004301143,0.8371707,0.0000971389,0.0005149589,0.0002459015,0.00004067246,0.000007005558,0.00044591315],"genre_scores_gemma":[0.8232143,0.00018401399,0.1747055,0.0004288135,0.000058998834,0.00025322323,0.00037973217,0.000056937384,0.00071846903],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786687,0.00088219816,0.00039272525,0.00043911237,0.0001451436,0.00027395962],"domain_scores_gemma":[0.9992757,0.00001780111,0.0001922885,0.00038671287,0.00008185981,0.000045628094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014206647,0.0001693692,0.00024061122,0.00012215045,0.00009396888,0.000006317176,0.00027919354,0.00013554424,0.00010031172],"category_scores_gemma":[0.00013518971,0.00018712551,0.00017103768,0.00017805432,0.000066272405,0.000002824033,0.00021810869,0.00021971054,0.0000010078339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007921302,0.00013890727,0.00008531817,0.000011794784,0.000057194262,0.0000027166766,0.000028772412,0.00011351704,0.99623406,0.00046385097,0.00042722363,0.002357422],"study_design_scores_gemma":[0.00039785018,0.00055232685,0.0000058921305,0.0000046176133,0.000019601335,0.000013416129,0.00014784894,0.00032435046,0.9042522,0.0008247455,0.093291335,0.00016582618],"about_ca_topic_score_codex":0.00007776417,"about_ca_topic_score_gemma":0.000012603695,"teacher_disagreement_score":0.66603774,"about_ca_system_score_codex":0.00006972657,"about_ca_system_score_gemma":0.000061023347,"threshold_uncertainty_score":0.7630757},"labels":[],"label_agreement":null},{"id":"W4214734180","doi":"10.1007/978-1-0716-2051-9_6","title":"Monitoring Cellular Responses to Infection with Fluorescent Biosensors","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"","keywords":"Biosensor; Fluorescence; Förster resonance energy transfer; Biomolecule; Fluorescence microscope; Chemistry; Bioreporter; Green fluorescent protein; Biophysics; Cell biology; Biology; Biochemistry; Reporter gene; Gene; Gene expression","score_opus":0.025948983749714206,"score_gpt":0.3920198079968036,"score_spread":0.36607082424708937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214734180","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8556554,0.00055249897,0.14282109,0.00028921725,0.00020981122,0.00033349797,0.000008390962,0.000019586489,0.000110517256],"genre_scores_gemma":[0.7917099,0.00011847615,0.20697236,0.00025992814,0.0001471413,0.0003657353,0.000051302562,0.000047316695,0.0003278427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99699056,0.0013543015,0.00025926792,0.0006722638,0.00017743972,0.0005461782],"domain_scores_gemma":[0.9991781,0.000039497252,0.00006291339,0.0005135354,0.00007934365,0.00012656959],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013799089,0.0002203054,0.00022796873,0.00026919515,0.00015561182,0.000016159871,0.00033861457,0.00015028073,0.000025107582],"category_scores_gemma":[0.00028789326,0.00020824811,0.000082923674,0.00065059576,0.00012699362,0.0000034073619,0.0004884245,0.0003214173,0.0000028382738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00038485846,0.00008645452,0.08773937,0.000011226922,0.000024069503,0.000035869234,0.000038277813,0.000098111435,0.9053629,0.00004493338,0.000031893476,0.0061419983],"study_design_scores_gemma":[0.00037817762,0.000949851,0.0021041252,0.000013705129,0.000007787891,0.000037169346,0.00013797928,0.000020009184,0.98373723,0.000048462054,0.012288278,0.0002772099],"about_ca_topic_score_codex":0.00012279242,"about_ca_topic_score_gemma":0.000010080053,"teacher_disagreement_score":0.085635245,"about_ca_system_score_codex":0.0000827899,"about_ca_system_score_gemma":0.000104538245,"threshold_uncertainty_score":0.8492111},"labels":[],"label_agreement":null},{"id":"W4214754878","doi":"10.1007/978-1-0716-2051-9_20","title":"Automated Microscopy Image Segmentation and Analysis with Machine Learning","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Pipeline (software); Computer science; Artificial intelligence; Segmentation; Pipeline transport; Image segmentation; Image (mathematics); Set (abstract data type); Pattern recognition (psychology); Computer vision; Machine learning; Engineering","score_opus":0.006598480500449183,"score_gpt":0.3793595448577596,"score_spread":0.3727610643573104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214754878","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20105702,0.0014909601,0.79697376,0.000047615868,0.000006061791,0.000076807046,0.0000031400255,0.00004912233,0.00029549375],"genre_scores_gemma":[0.044695523,0.00034925333,0.95372206,0.00026126174,0.000009227817,0.000025976322,0.00075007766,0.000021861313,0.00016475913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978144,0.0011400189,0.00023085113,0.0005515589,0.000049144717,0.00021401994],"domain_scores_gemma":[0.99939585,0.000033001626,0.00009718547,0.0003269326,0.0001027597,0.00004427165],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005937606,0.00016907591,0.00030859731,0.00020713922,0.00004479536,0.0000310538,0.00009652287,0.00016057506,0.00002917636],"category_scores_gemma":[0.00021710664,0.00015649584,0.00009621217,0.0006697343,0.00012979558,0.0000034647112,0.0001520627,0.00014603634,7.8490507e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026337551,0.00003186995,0.03211102,0.000008085509,0.00038440974,0.0000492978,0.000021727988,0.00007849243,0.96420217,0.000016720975,0.0000130423705,0.0030568058],"study_design_scores_gemma":[0.00033495054,0.00014701165,0.0012434387,0.000003944932,0.00026538945,0.000029251714,0.00004006307,0.0045312615,0.9920742,0.000083665895,0.0010623038,0.00018453163],"about_ca_topic_score_codex":0.00006394664,"about_ca_topic_score_gemma":0.00010796873,"teacher_disagreement_score":0.15674828,"about_ca_system_score_codex":0.000015297002,"about_ca_system_score_gemma":0.000034393543,"threshold_uncertainty_score":0.6381715},"labels":[],"label_agreement":null},{"id":"W4214764511","doi":"10.1007/978-1-0716-2051-9_9","title":"Quantitative Immunofluorescent Imaging of Immune Cells in Mucosal Tissues","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Immune system; Flow cytometry; Foreskin; Immunofluorescence; Pathology; Biology; Staining; Cytometry; Immunology; Antibody; Medicine; Cell culture","score_opus":0.011928431060614244,"score_gpt":0.3844928050944304,"score_spread":0.37256437403381615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4214764511","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37460482,0.014705766,0.60888267,0.00011924823,0.00011911948,0.0004116713,0.000017180471,0.000020628353,0.001118889],"genre_scores_gemma":[0.39800853,0.0003352847,0.60111237,0.00016619655,0.000011055073,0.00012087827,0.00012733099,0.00003428172,0.0000840839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99640286,0.0020990768,0.00059529685,0.0004917177,0.00009446727,0.00031655488],"domain_scores_gemma":[0.9991011,0.00006543923,0.00020419594,0.0005462267,0.000057820194,0.00002523142],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019810412,0.00018659236,0.00040331052,0.00035435686,0.000038093967,0.0000059253116,0.00046103884,0.000090221816,0.000068828354],"category_scores_gemma":[0.00023555018,0.00020662749,0.00017751468,0.00042224844,0.00018329594,0.0000028413708,0.0006977531,0.00027161153,0.0000010295594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100412944,0.00014949762,0.0038153555,0.000011318613,0.00004134865,0.00003571832,0.00009637708,0.00016873528,0.9879031,0.0005075209,0.00005502776,0.007115557],"study_design_scores_gemma":[0.00038985192,0.00033280408,0.00044448738,0.0000071876707,0.000015543148,0.000009322597,0.00028642282,0.0004660765,0.99200165,0.0012439514,0.0045988117,0.00020387051],"about_ca_topic_score_codex":0.0004607458,"about_ca_topic_score_gemma":0.000028407125,"teacher_disagreement_score":0.0234037,"about_ca_system_score_codex":0.00005499281,"about_ca_system_score_gemma":0.000056653367,"threshold_uncertainty_score":0.84260243},"labels":[],"label_agreement":null},{"id":"W4220731393","doi":"10.1007/978-1-0716-2181-3_11","title":"Approaches for CRISPR/Cas9 Genome Editing in C. elegans","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"CRISPR; Palindrome; Cas9; Genome editing; Biology; Genetics; Genome; Computational biology; Nuclease; Gene","score_opus":0.032213428758166775,"score_gpt":0.41556173343698977,"score_spread":0.38334830467882297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220731393","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06986596,0.0025079197,0.9263059,0.00016989924,0.00030427243,0.0003885109,0.000030288165,0.0000115105,0.00041572697],"genre_scores_gemma":[0.34900975,0.000032562068,0.6492946,0.00035113716,0.00018933843,0.00069833046,0.00025278554,0.00005168392,0.00011979194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981289,0.00051667757,0.0003188626,0.0005300494,0.00005689538,0.00044864643],"domain_scores_gemma":[0.9995001,0.00005499349,0.0000581065,0.00032486534,0.000017669896,0.000044257973],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014794116,0.00018007745,0.00025001768,0.0001788012,0.000066016604,0.00000790643,0.00030475634,0.00014788199,0.000020076945],"category_scores_gemma":[0.000276559,0.00020737661,0.00011486264,0.00022200824,0.000049515853,0.0000013552852,0.00030235914,0.00023157851,4.4451753e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003831712,0.000053390733,0.0012340513,0.000021772626,0.000022157932,0.000008759147,0.000097688906,0.015971266,0.9732867,0.0009862634,0.0000283315,0.008251327],"study_design_scores_gemma":[0.0018068249,0.000800534,0.0012918838,0.0000065458426,0.000022964925,0.00006760411,0.00090530503,0.006575768,0.85250527,0.004183332,0.13115658,0.000677366],"about_ca_topic_score_codex":0.000022127015,"about_ca_topic_score_gemma":0.000026407053,"teacher_disagreement_score":0.2791438,"about_ca_system_score_codex":0.000041896317,"about_ca_system_score_gemma":0.000041429717,"threshold_uncertainty_score":0.8456573},"labels":[],"label_agreement":null},{"id":"W4220820995","doi":"10.1007/978-1-0716-2181-3_5","title":"Observing and Quantifying Fluorescent Reporters","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Fluorescence; Fluorescent protein; Transparency (behavior); Fluorescence microscope; Biology; Fluorescent labelling; Microscope; Green fluorescent protein; Computer science; Optics; Genetics; Physics; Gene","score_opus":0.04329566616723346,"score_gpt":0.37712675354711234,"score_spread":0.3338310873798789,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4220820995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52894694,0.0024770233,0.46766797,0.00020672368,0.00037499613,0.00017399994,0.0000060515026,0.000014242403,0.00013208274],"genre_scores_gemma":[0.5439015,0.00015575648,0.45472538,0.00095255615,0.000046946494,0.000055768483,0.000064888314,0.00003535608,0.00006184676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99742866,0.0010938265,0.00035642704,0.00064502144,0.000095801726,0.00038027292],"domain_scores_gemma":[0.9992324,0.000031411437,0.00012515586,0.00050684053,0.000030113546,0.00007406539],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015379671,0.0001955293,0.00025051204,0.0001155669,0.00015807406,0.000017665883,0.00029452867,0.00013325382,0.000034916106],"category_scores_gemma":[0.00024439886,0.00021825069,0.000082012775,0.000141237,0.00012325484,0.0000016938275,0.00078745856,0.00025982535,7.699376e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023693068,0.000040228297,0.023719132,0.00001484515,0.000031473995,0.00003617966,0.00021884339,0.00053211144,0.96796006,0.00043081355,0.000037798683,0.00695484],"study_design_scores_gemma":[0.0010982831,0.0007400004,0.0101931635,0.000011046786,0.000048787457,0.00034397267,0.0007196879,0.0018717477,0.9494944,0.0040677763,0.030619591,0.00079150766],"about_ca_topic_score_codex":0.00008126298,"about_ca_topic_score_gemma":0.000023563618,"teacher_disagreement_score":0.030581793,"about_ca_system_score_codex":0.000031684,"about_ca_system_score_gemma":0.00005237152,"threshold_uncertainty_score":0.89000046},"labels":[],"label_agreement":null},{"id":"W4221020799","doi":"10.1007/978-1-0716-1875-2_5","title":"Barley Stripe Mosaic Virus (BSMV)-Based Virus-Induced Gene Silencing to Functionally Characterize Genes in Wheat and Barley","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency","funders":"","keywords":"Biology; Gene; Gene silencing; Genetics; Virus; Genome; Mosaic virus; Vector (molecular biology); Plant virus; Recombinant DNA","score_opus":0.05548207217557902,"score_gpt":0.34410283592615476,"score_spread":0.28862076375057577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4221020799","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9935583,0.0010869913,0.002179007,0.0011244615,0.00025728255,0.0004562847,0.0012649816,0.000037304635,0.000035407178],"genre_scores_gemma":[0.8366393,0.0010458467,0.14738823,0.010127308,0.00038614095,0.0020896294,0.0021187516,0.000020811223,0.00018399219],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995634,0.0024340015,0.0003837725,0.000707539,0.0002334752,0.0006071863],"domain_scores_gemma":[0.9988805,0.00074714184,0.0000740264,0.00011547457,0.000046268306,0.00013660477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020319344,0.0002472413,0.00043719588,0.00015061822,0.00026485574,0.000032928063,0.00039229944,0.0001304588,0.000287204],"category_scores_gemma":[0.0005055454,0.0001321124,0.00007733365,0.00082939083,0.00007473581,0.00004361233,0.00060929183,0.00040130835,0.000006174919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015279255,0.000074425574,0.003301023,0.000004778576,0.000016971691,0.00006134432,0.00004610166,0.00011404286,0.9382064,0.000035900146,0.00003685044,0.057949416],"study_design_scores_gemma":[0.0004966593,0.0010404652,0.087511495,0.000014637668,0.000009510235,0.00001898184,0.00017514417,0.00058294466,0.892861,0.0006577418,0.016170885,0.000460524],"about_ca_topic_score_codex":0.0017282689,"about_ca_topic_score_gemma":0.0018002475,"teacher_disagreement_score":0.15691899,"about_ca_system_score_codex":0.00014296826,"about_ca_system_score_gemma":0.000047337602,"threshold_uncertainty_score":0.5387387},"labels":[],"label_agreement":null},{"id":"W4225481820","doi":"10.1007/978-1-0716-2281-0_7","title":"3D Immunofluorescent Image Colocalization Quantification in Mouse Epiblast Stem Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Colocalization; Confocal microscopy; Confocal; Cytoplasm; Cell biology; Biology; Molecular biology; Chemistry; Pathology; Physics; Optics; Medicine","score_opus":0.025681209124531132,"score_gpt":0.37127389696980445,"score_spread":0.3455926878452733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225481820","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06473403,0.0004067918,0.933783,0.00006969157,0.00034946,0.00030660885,0.000011261415,0.00008295141,0.00025624386],"genre_scores_gemma":[0.13160497,0.00018283931,0.8675068,0.00009505964,0.000017987883,0.00035989005,0.00006042074,0.000065882785,0.00010611642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967994,0.001977401,0.00039925502,0.00029386557,0.00015827674,0.00037177795],"domain_scores_gemma":[0.99928355,0.00026815315,0.000038438448,0.00033571327,0.000028827426,0.00004532549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029722555,0.00012219751,0.00020694081,0.00042968252,0.00004320764,0.000014797374,0.00036467565,0.00012028608,0.0001189547],"category_scores_gemma":[0.0001999015,0.00013813948,0.000037803264,0.00077648193,0.00010416495,0.000021001228,0.0002510659,0.0005146881,0.000016002568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013688065,0.000049323713,0.0004282129,0.000033964097,0.000008865651,0.000017345259,0.000093235365,0.015403281,0.94629335,0.00070717034,0.00003363494,0.036917925],"study_design_scores_gemma":[0.00029996096,0.000058509377,0.00021158629,0.000007201404,0.0000019328745,0.0000026088228,0.00007271068,0.15035592,0.8432445,0.00036595928,0.005234784,0.0001443352],"about_ca_topic_score_codex":0.000057883743,"about_ca_topic_score_gemma":0.0000068111653,"teacher_disagreement_score":0.13495265,"about_ca_system_score_codex":0.00031751863,"about_ca_system_score_gemma":0.000032615862,"threshold_uncertainty_score":0.56331646},"labels":[],"label_agreement":null},{"id":"W4225515094","doi":"10.1007/978-1-0716-2063-2_15","title":"Purification and Characterization of Human DNA Ligase IIIα Complexes After Expression in Insect Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect Resistance and Genetics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"National Institute of Environmental Health Sciences; National Cancer Institute","keywords":"Recombinant DNA; DNA ligase; Biology; DNA; Molecular biology; Heterologous expression; Sf9; Heterologous; Insect; Gene; Cell biology; Spodoptera; Biochemistry","score_opus":0.015295890841464531,"score_gpt":0.32993112669702507,"score_spread":0.3146352358555605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225515094","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95293427,0.0005871988,0.04610063,0.000026808128,0.00006987411,0.0002046395,0.000025060152,0.0000032475846,0.000048265778],"genre_scores_gemma":[0.9364096,0.000110795074,0.062873244,0.00017956752,0.000021098766,0.00013334007,0.00022056929,0.000015815058,0.000035986683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982153,0.00092290336,0.0003022263,0.0003312963,0.000056717217,0.00017151884],"domain_scores_gemma":[0.9995496,0.000014486409,0.00011782041,0.00026757,0.00002654758,0.000023921017],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056279823,0.00011804165,0.00018711704,0.00015038728,0.000046219713,0.000004845076,0.00013532613,0.00012219873,0.000023066747],"category_scores_gemma":[0.000028591932,0.00012667142,0.00003968533,0.00015313583,0.000073434996,0.000002116587,0.00019012614,0.00011814397,1.8774227e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011118568,0.00007449159,0.0062324624,0.00002151472,0.000005595874,0.0000054864627,0.00014097073,0.000020296799,0.99199516,0.00008962136,0.000002251554,0.0013009855],"study_design_scores_gemma":[0.0003770007,0.0002919019,0.013879158,0.000008688295,0.000004478917,0.000004200689,0.00003917356,0.000023118213,0.9834791,0.0005536539,0.0012114503,0.00012806914],"about_ca_topic_score_codex":0.000016634169,"about_ca_topic_score_gemma":0.000025760017,"teacher_disagreement_score":0.016772615,"about_ca_system_score_codex":0.000016235841,"about_ca_system_score_gemma":0.000024285813,"threshold_uncertainty_score":0.5165511},"labels":[],"label_agreement":null},{"id":"W4225525988","doi":"10.1007/978-1-0716-1990-2_13","title":"Retrograde Axonal Transport of Neurotrophins in Basal Forebrain Cholinergic Neurons","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Basal forebrain; Neuroscience; Cholinergic neuron; Axoplasmic transport; Neurotrophin; Cholinergic; Basal (medicine); Biology; Endocrinology","score_opus":0.042860675949956496,"score_gpt":0.3880888275792095,"score_spread":0.34522815162925297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225525988","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89010817,0.000070047194,0.107837066,0.0009732133,0.00045620993,0.00025284768,0.000037423986,0.000019546143,0.0002454787],"genre_scores_gemma":[0.911013,0.000012606717,0.087400235,0.001352751,0.000027547547,0.000101554855,0.000017196866,0.000020550615,0.00005454407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9949848,0.0036240395,0.00045217221,0.00049749215,0.00013642455,0.0003050628],"domain_scores_gemma":[0.9993631,0.00020176968,0.00011281331,0.00027456385,0.000008935134,0.00003880889],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010057336,0.00014062077,0.00027641503,0.00035389786,0.000065484455,0.000003071583,0.00036182746,0.0000819759,0.00007334653],"category_scores_gemma":[0.00035971942,0.00013877671,0.00011912535,0.0008185509,0.00018734852,0.000031429023,0.00010797693,0.00050697086,5.1082446e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008676929,0.0001548848,0.003297578,0.0000065056674,0.0000015282618,0.00017808587,0.000049921622,0.004815299,0.9704708,0.019119786,0.00000489168,0.0018139611],"study_design_scores_gemma":[0.00063011737,0.00059328106,0.0032325552,0.0000027814742,0.0000052478463,0.000054077755,0.000010876065,0.0034234943,0.9801675,0.010213314,0.0015115552,0.00015517607],"about_ca_topic_score_codex":0.00003001311,"about_ca_topic_score_gemma":0.000016130332,"teacher_disagreement_score":0.02090485,"about_ca_system_score_codex":0.000032703447,"about_ca_system_score_gemma":0.000057039404,"threshold_uncertainty_score":0.565915},"labels":[],"label_agreement":null},{"id":"W4225526322","doi":"10.1007/978-1-0716-2217-9_22","title":"Modulation of VEGFA Signaling During Heart Regeneration in Zebrafish","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier Universitaire Sainte-Justine","funders":"Canadian Institutes of Health Research","keywords":"Zebrafish; Regeneration (biology); Vascular endothelial growth factor A; Angiogenesis; Myocardial infarction; Revascularization; Medicine; Bioinformatics; VEGF receptors; Cardiology; Biology; Vascular endothelial growth factor; Internal medicine; Cell biology","score_opus":0.0649747448442756,"score_gpt":0.45563301557158503,"score_spread":0.3906582707273094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225526322","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010443582,0.965939,0.022382665,0.000009766076,0.00017915605,0.0008767643,0.000024138311,0.000008306006,0.0001366597],"genre_scores_gemma":[0.0011178349,0.895337,0.102060646,0.000028680653,0.00011007825,0.00042298393,0.00073752186,0.00009812077,0.00008713393],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9935138,0.004307422,0.00084765034,0.0007692905,0.00014710361,0.0004147396],"domain_scores_gemma":[0.99892044,0.00017058883,0.0002073631,0.0006043018,0.000044554843,0.000052765066],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00201482,0.00031955956,0.0010757765,0.0006229182,0.000044234443,0.000010706303,0.00033391602,0.00058951916,0.000072759205],"category_scores_gemma":[0.0007973253,0.00034023062,0.00036259092,0.0006721065,0.00009455115,0.0000031716454,0.00047435667,0.0005405246,0.0000020779457],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022518581,0.00004962967,0.0000621777,0.0015088243,0.000047319918,0.000017129678,0.0000136948765,0.00020650096,0.7225697,0.00004455316,0.000002755758,0.2754552],"study_design_scores_gemma":[0.0008592351,0.00060230546,0.00007897015,0.0010183748,0.000095439915,0.00013253947,0.000024804087,0.00029185382,0.25719002,0.0005367894,0.7382534,0.000916267],"about_ca_topic_score_codex":0.000044269516,"about_ca_topic_score_gemma":0.000036412926,"teacher_disagreement_score":0.7382507,"about_ca_system_score_codex":0.00012669287,"about_ca_system_score_gemma":0.00025134144,"threshold_uncertainty_score":0.999905},"labels":[],"label_agreement":null},{"id":"W4225777900","doi":"10.1007/978-1-0716-2337-4_6","title":"Subcellular Fractionation Suitable for Studies of RNA and Protein Trafficking","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"National Cancer Institute","keywords":"Cytoplasm; RNA; Cell fractionation; Proteomics; Cell biology; Nuclear pore; Nucleus; RNA-binding protein; Fractionation; Nuclear protein; Biology; Computational biology; Chemistry; Biochemistry; Enzyme; Gene; Chromatography","score_opus":0.046117289044821395,"score_gpt":0.42931236443114773,"score_spread":0.38319507538632636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4225777900","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6324571,0.003982148,0.36302736,0.00010083882,0.000048042508,0.00032891022,0.0000081771,0.0000031290244,0.000044306646],"genre_scores_gemma":[0.6004226,0.00010990363,0.3983298,0.00008988127,0.000031092535,0.0004524584,0.000065746375,0.000019272242,0.00047924757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985134,0.0007098199,0.00021093698,0.00028321196,0.00006769868,0.00021490749],"domain_scores_gemma":[0.9995581,0.000094983436,0.00008444502,0.00015422517,0.00008236278,0.00002591003],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019500195,0.000088193716,0.00018814702,0.00011559599,0.00010144895,0.000004389573,0.00011798005,0.00007658524,0.0000061492037],"category_scores_gemma":[0.000902053,0.00008952919,0.00005571801,0.00012332512,0.000090979374,0.0000022538104,0.00018887338,0.00012056174,6.1457726e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009635051,0.000032785883,0.00039342564,0.00003740773,0.00005286605,0.000002047846,0.00004828823,0.00033358342,0.9866756,0.0017874171,0.000019200257,0.010521031],"study_design_scores_gemma":[0.0005659988,0.00064768887,0.00006411087,0.0000057584434,0.0000074070267,0.0000067129577,0.00042596814,0.0008538806,0.9870215,0.0029653227,0.007329536,0.00010609958],"about_ca_topic_score_codex":0.000021537824,"about_ca_topic_score_gemma":0.000007044324,"teacher_disagreement_score":0.035302427,"about_ca_system_score_codex":0.000024537992,"about_ca_system_score_gemma":0.000044526318,"threshold_uncertainty_score":0.36508945},"labels":[],"label_agreement":null},{"id":"W4226055636","doi":"10.1007/978-1-0716-2164-6_2","title":"Protoplast Isolation and Transfection in the Single-Cell C4 Species Bienertia sinuspersici","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Protoplast; Organelle; Transfection; Cell sorting; Green fluorescent protein; Cell biology; Intracellular; Cell; Biology; Polyethylene glycol; Plant cell; Cytoplasm; Reporter gene; Molecular biology; Chemistry; Gene expression; Gene; Biochemistry","score_opus":0.020710804454221538,"score_gpt":0.29705597048075094,"score_spread":0.2763451660265294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226055636","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74141186,0.00066341244,0.25572076,0.00025180445,0.00012444069,0.0005486023,0.000015597805,0.000005259196,0.0012582284],"genre_scores_gemma":[0.95875776,0.00003155486,0.040247217,0.0006247645,0.000036250312,0.00013982093,0.000075280084,0.000010169005,0.000077158475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976754,0.0016034717,0.00015103634,0.00031831503,0.000059569353,0.00019217064],"domain_scores_gemma":[0.99970084,0.00004152971,0.00004181825,0.00018360981,0.000013716379,0.000018461644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009353775,0.00011206776,0.00012106943,0.000102321246,0.000114522096,0.000011723326,0.00019205389,0.00010858557,0.00002404516],"category_scores_gemma":[0.000059867372,0.000102222824,0.000051102816,0.00021626857,0.000106026964,0.0000025618322,0.00013001781,0.00019879588,5.403595e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008926399,0.00010706531,0.019180905,0.000009106414,0.000007673016,0.0000093282,0.00032751705,0.00018901304,0.9771013,0.00042530918,0.000018048231,0.0025354482],"study_design_scores_gemma":[0.0012250042,0.0014505136,0.014371412,0.000004321791,0.000019674064,0.0000721308,0.000791407,0.00022082229,0.9552855,0.0018937226,0.024363788,0.00030172386],"about_ca_topic_score_codex":0.00003903691,"about_ca_topic_score_gemma":0.00005119545,"teacher_disagreement_score":0.21734591,"about_ca_system_score_codex":0.000026144671,"about_ca_system_score_gemma":0.000020773985,"threshold_uncertainty_score":0.4168526},"labels":[],"label_agreement":null},{"id":"W4226069642","doi":"10.1007/978-1-0716-2172-1_3","title":"Studying Protista WBR and Repair Using Physarum polycephalum","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Slime Mold and Myxomycetes Research","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Algoma University","funders":"Advanced Research Projects Agency; Defense Advanced Research Projects Agency; Paul G. Allen Frontiers Group","keywords":"Physarum polycephalum; Physarum; Slime mold; Biology; Regeneration (biology); Biological system; Cell biology","score_opus":0.04508487050579775,"score_gpt":0.4059486426124204,"score_spread":0.3608637721066227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226069642","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80657196,0.00472104,0.18627827,0.00005713936,0.00044077,0.0006482661,0.00001188542,0.00026766866,0.0010029862],"genre_scores_gemma":[0.42521903,0.000021875909,0.5744359,0.000078517405,0.000027997785,0.00013152226,0.0000047930275,0.000038440034,0.000041923355],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99812526,0.0009415003,0.00018801479,0.0002784766,0.00008634464,0.00038038392],"domain_scores_gemma":[0.9995751,0.00010770867,0.000017958437,0.00023976094,0.00001167413,0.00004782361],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011710447,0.00012666517,0.00021914052,0.00021212881,0.00009675918,0.000011246243,0.00016027398,0.000059230715,0.00005923717],"category_scores_gemma":[0.00010929342,0.00013696286,0.000052286974,0.0003228502,0.00006206559,0.000019637788,0.0003559984,0.00037458682,7.2784405e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000107566,0.000022286264,0.020330492,0.000040115796,0.000047744168,0.00008379426,0.00017620549,0.002515569,0.9623923,0.0006551756,0.000015806092,0.013709759],"study_design_scores_gemma":[0.003479197,0.0010982574,0.016438872,0.00005550926,0.0000872525,0.0004918196,0.0019736642,0.47022587,0.44231632,0.013215356,0.048808586,0.0018092681],"about_ca_topic_score_codex":0.00006385808,"about_ca_topic_score_gemma":0.0000022095967,"teacher_disagreement_score":0.520076,"about_ca_system_score_codex":0.00009616989,"about_ca_system_score_gemma":0.00002055097,"threshold_uncertainty_score":0.55851835},"labels":[],"label_agreement":null},{"id":"W4226148585","doi":"10.1007/978-1-0716-2281-0_8","title":"Flow Cytometric Characterization of Pluripotent Cell Protein Markers in Naïve, Formative, and Primed Pluripotent Stem Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"Induced pluripotent stem cell; Embryonic stem cell; Epiblast; Embryoid body; Cell biology; Cell sorting; Biology; KOSR; Molecular biology; Flow cytometry; Genetics; Gene","score_opus":0.013368838530926607,"score_gpt":0.3061065359170314,"score_spread":0.2927376973861048,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226148585","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80170625,0.000833772,0.19584134,0.00006518151,0.00013231639,0.0011454761,0.000075496115,0.000008547706,0.00019159126],"genre_scores_gemma":[0.82393014,0.0003677675,0.17407674,0.00015210107,0.000022990269,0.00059908355,0.0002937705,0.0000645904,0.00049279566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947067,0.002976109,0.00071531464,0.00071388186,0.00026816307,0.0006198611],"domain_scores_gemma":[0.99897224,0.000062607505,0.00029306,0.00048047307,0.000081827675,0.00010979355],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027547996,0.00028557857,0.0004725008,0.00087873824,0.000076556134,0.0000131454635,0.00045201933,0.0002331439,0.000035712397],"category_scores_gemma":[0.00009596555,0.00029953825,0.00011595733,0.0010283056,0.00016296434,0.000008320844,0.000946157,0.00040547102,0.000001550084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031847204,0.00022124509,0.0009586188,0.00013049136,0.0000347378,0.000032984688,0.000108674765,0.000582577,0.98065174,0.000029359595,0.000005254211,0.016925827],"study_design_scores_gemma":[0.0015133824,0.00080806535,0.0012776003,0.000017672524,0.00000964954,0.000019034038,0.0001245712,0.00375167,0.9895787,0.00010123493,0.0025048582,0.00029351187],"about_ca_topic_score_codex":0.00003156283,"about_ca_topic_score_gemma":0.0000044248964,"teacher_disagreement_score":0.022223895,"about_ca_system_score_codex":0.00013230093,"about_ca_system_score_gemma":0.00014092395,"threshold_uncertainty_score":0.9999457},"labels":[],"label_agreement":null},{"id":"W4226270092","doi":"10.1007/978-1-0716-2063-2_14","title":"Purification of DNA-Dependent Protein Kinase Catalytic Subunit (DNA-PKcs) from HeLa Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Cancer Institute","keywords":"DNA-PKcs; Protein subunit; Ku70; Recombinant DNA; HeLa; Molecular biology; DNA; Protein kinase A; Biology; Chemistry; Kinase; Cell biology; Biochemistry; Gene; Cell; DNA repair","score_opus":0.01288007102683703,"score_gpt":0.3612527270416305,"score_spread":0.34837265601479345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4226270092","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49921888,0.0013494561,0.49865758,0.000050804283,0.00018336333,0.00031067422,0.00006613882,0.000009548955,0.00015353369],"genre_scores_gemma":[0.7263128,0.00004027114,0.27256307,0.000102676466,0.000050013674,0.00023540347,0.0004378489,0.000039757295,0.00021815542],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785525,0.00081267994,0.00039819788,0.00052577275,0.000114371396,0.0002937188],"domain_scores_gemma":[0.999085,0.00003779508,0.00012910843,0.00064388127,0.00004332648,0.000060858343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008569841,0.0001957985,0.0002704374,0.00014072146,0.00005135147,0.00000652816,0.0004065404,0.00016930827,0.00008328944],"category_scores_gemma":[0.00014177765,0.00021963917,0.00011126721,0.00020714432,0.00007965609,0.0000016442106,0.00035911246,0.00021303256,0.0000030121248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052680018,0.00009348661,0.0002126541,0.000017657334,0.000042813677,0.000012782347,0.000070925045,0.0014171773,0.99210715,0.00019984308,0.000017071812,0.005755761],"study_design_scores_gemma":[0.00047121602,0.00026362162,0.00017372979,0.000005795893,0.000021129374,0.0000069732464,0.0001105765,0.0002848044,0.99152386,0.0008638125,0.0060503385,0.00022411876],"about_ca_topic_score_codex":0.00017565729,"about_ca_topic_score_gemma":0.000019778478,"teacher_disagreement_score":0.2270939,"about_ca_system_score_codex":0.000037513757,"about_ca_system_score_gemma":0.00006569137,"threshold_uncertainty_score":0.89566255},"labels":[],"label_agreement":null},{"id":"W4229546410","doi":"10.1007/978-1-60327-355-8","title":"Helicases","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Genetic and Mutation Studies","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Hospital for Sick Children","funders":"","keywords":"Computer science","score_opus":0.0387088175705419,"score_gpt":0.37515588142398515,"score_spread":0.33644706385344325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229546410","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.010526854,0.012155126,0.05498548,0.0017647519,0.0019827946,0.0011003197,0.0006064391,0.00021321997,0.916665],"genre_scores_gemma":[0.00020760337,0.0010387689,0.61600757,0.0025835629,0.0006662558,0.00013072374,0.0012076221,0.0000060467955,0.37815186],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9987034,0.00035046256,0.00025221828,0.0003894327,0.000060632417,0.00024383143],"domain_scores_gemma":[0.99913156,0.0005997461,0.00011190371,0.00007025046,0.00004066822,0.00004588113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046392376,0.00020730161,0.00038818523,0.000028628132,0.00004850355,0.000010305645,0.00024631005,0.0005953935,0.00032280642],"category_scores_gemma":[0.00019689261,0.0000791824,0.000114592054,0.0000847906,0.00014261568,0.0000057745087,0.00013947852,0.00039811432,0.000045231063],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000048611873,0.000011529393,0.00006897928,0.0000038867265,0.000017725268,0.000024495033,0.000009351145,2.6804278e-7,0.8177107,0.002903222,0.0013169871,0.17792802],"study_design_scores_gemma":[0.00006490188,0.000108420274,0.00035923225,0.000016954751,0.000018748397,0.000022484886,0.000011292208,0.0000025807606,0.022089807,0.046408307,0.9306315,0.00026576078],"about_ca_topic_score_codex":0.000027605787,"about_ca_topic_score_gemma":0.00017616278,"teacher_disagreement_score":0.9293145,"about_ca_system_score_codex":0.000017916342,"about_ca_system_score_gemma":0.000024207398,"threshold_uncertainty_score":0.45922196},"labels":[],"label_agreement":null},{"id":"W4229658727","doi":"10.1007/978-1-4939-9176-1_1","title":"Setting Up an Ancient DNA Laboratory","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic and Genetic Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Environment and Climate Change Canada","funders":"","keywords":"Ancient DNA; DNA; DNA sequencing; Contamination; Biology; Archaeology; Computational biology; Evolutionary biology; Geography; Genetics; Ecology; Medicine","score_opus":0.015855358830775688,"score_gpt":0.40712100293631226,"score_spread":0.39126564410553655,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229658727","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82142484,0.00094683736,0.17494577,0.00009456629,0.00046884202,0.00026809986,0.000011561451,0.000011995754,0.0018274788],"genre_scores_gemma":[0.3060666,0.00007939733,0.69048864,0.001944927,0.00015661496,0.000056578378,0.00019335774,0.000057937115,0.0009559457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972402,0.0012667401,0.0002597934,0.00063910306,0.00010065478,0.00049353635],"domain_scores_gemma":[0.99899226,0.00003544186,0.000061659506,0.00069808454,0.00010265511,0.00010991578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018477443,0.00017770211,0.0002231749,0.00010983947,0.000034340243,0.000015009803,0.0003429829,0.00030484938,0.00009456172],"category_scores_gemma":[0.00030149755,0.00016645937,0.00007446731,0.00022203365,0.00016192133,0.000002575952,0.00022860401,0.00019219935,0.00004071136],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003988131,0.000030245468,0.0075129196,0.00001104601,0.000018521989,0.000006167015,0.000040976764,0.000060388124,0.9767332,0.0008033349,0.00014916409,0.014594135],"study_design_scores_gemma":[0.00056839833,0.00055600563,0.0022104406,0.0000068339273,0.0000043838304,0.00000948136,0.00011152102,0.00030552575,0.9541011,0.0010384863,0.040846147,0.00024166201],"about_ca_topic_score_codex":0.00001848625,"about_ca_topic_score_gemma":0.000012254752,"teacher_disagreement_score":0.51554286,"about_ca_system_score_codex":0.000019592913,"about_ca_system_score_gemma":0.00013911903,"threshold_uncertainty_score":0.6788016},"labels":[],"label_agreement":null},{"id":"W4229780569","doi":"10.1007/978-1-0716-0716-9","title":"Ribozymes","year":2020,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Ribozyme; Biology; Genetics","score_opus":0.022840047017322795,"score_gpt":0.3581567923584567,"score_spread":0.3353167453411339,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229780569","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000024411433,0.008656398,0.8235235,0.00028557083,0.0004988775,0.00048737388,0.000049074828,0.000030358346,0.16644442],"genre_scores_gemma":[0.00002725224,0.000706193,0.8350475,0.0020627934,0.0005247551,0.00013723919,0.0006394646,0.00016009496,0.16069475],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99661136,0.0012558908,0.0005062102,0.0010593744,0.00010713371,0.00046005682],"domain_scores_gemma":[0.99872863,0.000077183366,0.00023047725,0.00077786966,0.000053670203,0.00013213881],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008823401,0.0005160069,0.00070994423,0.00015261564,0.000037738846,0.0000180279,0.00068092527,0.0015117885,0.00014573854],"category_scores_gemma":[0.00058129965,0.0005167556,0.00034087597,0.00009203748,0.00017370179,0.0000010659861,0.00043013974,0.00043864083,0.00006233786],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054116546,0.00001684032,0.000012816433,0.000043356635,0.00011314192,0.000054506552,0.000012702002,0.000004147092,0.957798,0.009882364,0.004167351,0.027840668],"study_design_scores_gemma":[0.00019498706,0.00026219743,0.0000014726236,0.000027836439,0.000027074148,0.000014106689,0.0000029653363,0.0000045198362,0.44806767,0.035039388,0.5159814,0.00037641727],"about_ca_topic_score_codex":0.0000049734494,"about_ca_topic_score_gemma":0.000005364618,"teacher_disagreement_score":0.511814,"about_ca_system_score_codex":0.000043616747,"about_ca_system_score_gemma":0.00032656308,"threshold_uncertainty_score":0.99978447},"labels":[],"label_agreement":null},{"id":"W4229923191","doi":"10.1007/978-1-59745-249-6","title":"Wnt Signaling","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; Universität Ulm; National Cancer Institute; University of Toronto; Albert-Ludwigs-Universität Freiburg; University of Sydney; Leslie Dan Faculty of Pharmacy, University of Toronto; Ludwig Institute for Cancer Research; Institut National de la Santé et de la Recherche Médicale; University of Washington; University of Dundee; Monash University; Vertex Pharmaceuticals; Children’s Hospital of Wisconsin Research Institute; Westmead Millennium Institute for Medical Research; Murdoch Children's Research Institute","keywords":"Wnt signaling pathway; Cell biology; Chemistry; Biology; Signal transduction","score_opus":0.03443007762278731,"score_gpt":0.405979742479361,"score_spread":0.3715496648565737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4229923191","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001373196,0.056427702,0.8990219,0.00029263474,0.00087055634,0.00036192397,0.000004391149,0.00008132443,0.04280221],"genre_scores_gemma":[0.000024972176,0.00038967564,0.5758192,0.00017283899,0.00044433319,0.00002270474,0.00012266541,0.0000628945,0.42294073],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982846,0.00038322984,0.0004152586,0.00047675302,0.00011284536,0.00032734964],"domain_scores_gemma":[0.9991821,0.00018028943,0.000095132644,0.00036478738,0.000060391532,0.00011728836],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006327819,0.0003464611,0.0009941314,0.00042433446,0.000024713578,0.0000020654259,0.00011936729,0.0007197517,0.00008654554],"category_scores_gemma":[0.0003950007,0.00027681803,0.00018051195,0.0001254589,0.00022800217,0.0000041915555,0.00005627012,0.000952625,0.000020707535],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004031448,0.000056723948,0.00006838263,0.00024284922,0.0002847557,0.002567153,0.0001961142,0.0002028769,0.9431349,0.020962529,0.0027340911,0.02950933],"study_design_scores_gemma":[0.0014081196,0.00072116114,0.000026621065,0.00069820194,0.00017773912,0.0008383929,0.000008828014,0.00017062867,0.11283736,0.0035378146,0.8790635,0.00051165285],"about_ca_topic_score_codex":0.000006633499,"about_ca_topic_score_gemma":5.21318e-7,"teacher_disagreement_score":0.87632936,"about_ca_system_score_codex":0.00017621348,"about_ca_system_score_gemma":0.0002732281,"threshold_uncertainty_score":0.9999684},"labels":[],"label_agreement":null},{"id":"W4230488590","doi":"10.1007/978-1-4939-7714-7_1","title":"Mouse Genotyping","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Heart and Stroke Foundation; Hospital for Sick Children; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Genotyping; Agarose gel electrophoresis; Polymerase chain reaction; genomic DNA; Biology; Agarose; Molecular biology; DNA extraction; DNA; Genetics; Genotype; Gene","score_opus":0.021083131066491508,"score_gpt":0.3906133971050944,"score_spread":0.3695302660386029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230488590","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2625702,0.0008219392,0.73438686,0.00009282456,0.00027651162,0.00010981681,0.0000018115079,0.000011270609,0.0017287576],"genre_scores_gemma":[0.22679754,0.00013943283,0.7708714,0.00059330586,0.00053955754,0.000022249402,0.000033140524,0.000033954257,0.0009694128],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853414,0.00039959897,0.00021012861,0.0005296924,0.000038684477,0.0002877752],"domain_scores_gemma":[0.99937785,0.000008033859,0.000057252797,0.00042925452,0.000080684964,0.000046954025],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007055571,0.00013813206,0.00014549594,0.000081647755,0.000052993742,0.000008472952,0.00018935054,0.00023646707,0.000028850833],"category_scores_gemma":[0.00023992703,0.00012985997,0.00006751055,0.00014316587,0.0002364055,9.66605e-7,0.0001669137,0.000098294986,0.00001722524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039435457,0.000024341769,0.0011130252,0.0000031836698,0.000019434987,0.0000016322795,0.00002093833,0.000014177797,0.980379,0.0010593352,0.000061066006,0.01726445],"study_design_scores_gemma":[0.00019726419,0.00041289753,0.00047931477,0.0000023960356,0.000005564455,0.000014412039,0.000018088238,0.000074051546,0.9285386,0.0013626795,0.06873039,0.000164328],"about_ca_topic_score_codex":0.0000179962,"about_ca_topic_score_gemma":0.00001481153,"teacher_disagreement_score":0.06866933,"about_ca_system_score_codex":0.000011206261,"about_ca_system_score_gemma":0.000033296477,"threshold_uncertainty_score":0.5295536},"labels":[],"label_agreement":null},{"id":"W4230605880","doi":"10.1007/978-1-60327-015-1_19","title":"Nucleosome Mapping","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Nucleosome; Chromatin; Histone; Histone code; Cell biology; Chromatin remodeling; DNA; Biology; Chromatosome; Genetics; Computational biology","score_opus":0.012969447029115516,"score_gpt":0.34247262614566043,"score_spread":0.3295031791165449,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230605880","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.311785,0.0007143625,0.6834893,0.0002678475,0.00013785918,0.00011924526,0.0000038112346,0.000013100568,0.0034694404],"genre_scores_gemma":[0.22248396,0.000100744095,0.7756609,0.0014822655,0.00006879387,0.000009657629,0.000058461246,0.000018298202,0.0001169569],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99858963,0.0003413581,0.00027589488,0.0004131337,0.000039029546,0.00034092215],"domain_scores_gemma":[0.99940217,0.0000145289305,0.00007258133,0.00042235316,0.000030220084,0.00005815663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005730405,0.00017006764,0.0002096978,0.000102999904,0.00003499868,0.00001285548,0.00029019563,0.00026253614,0.000014954608],"category_scores_gemma":[0.00015240179,0.00017418482,0.000100713805,0.00015094675,0.00006185382,0.0000011781584,0.00009989753,0.00013231706,0.000006469509],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010104845,0.000036405036,0.00076257,0.0000032261694,0.000013430646,0.000008157333,0.000023095336,0.00008771134,0.9640445,0.0042717378,0.000031482617,0.030707551],"study_design_scores_gemma":[0.0015258943,0.0009694202,0.010971909,0.000024288314,0.000018132418,0.00009648339,0.00011991234,0.0023136646,0.83751893,0.0737842,0.071699366,0.0009578113],"about_ca_topic_score_codex":0.0000054675515,"about_ca_topic_score_gemma":0.0000036340934,"teacher_disagreement_score":0.12652561,"about_ca_system_score_codex":0.00001817645,"about_ca_system_score_gemma":0.00003290596,"threshold_uncertainty_score":0.7103051},"labels":[],"label_agreement":null},{"id":"W4230624058","doi":"10.1007/978-1-0716-1138-8_10","title":"Longitudinal Studies 5: Development of Risk Prediction Models for Patients with Chronic Disease","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Chronic Disease Management Strategies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Seven Oaks General Hospital","funders":"","keywords":"Kidney disease; Disease; Intensive care medicine; Medicine; Chronic disease; Risk analysis (engineering); Internal medicine","score_opus":0.07180113812217251,"score_gpt":0.40308712512371764,"score_spread":0.3312859870015451,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230624058","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011486182,0.028922163,0.9603945,0.000032458363,0.0002862254,0.0017909787,0.00027369184,0.000038225364,0.00711313],"genre_scores_gemma":[0.0034096246,0.0028325627,0.98467076,0.000051567764,0.0001283385,0.00046608373,0.0023605009,0.00012715996,0.0059533813],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99813926,0.00013813881,0.00059843727,0.00066072086,0.00019335766,0.00027006195],"domain_scores_gemma":[0.99858344,0.0001835233,0.00035214875,0.00046461288,0.00032401583,0.00009227523],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0004606464,0.00036741927,0.00084075984,0.0002794392,0.000045065535,0.00000524547,0.00010967624,0.0001932297,0.000049320643],"category_scores_gemma":[0.00024118772,0.00030606295,0.0001797393,0.000058970014,0.00025420784,0.000031081643,0.00018037784,0.00022348511,7.8720404e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.007443281,0.0019357116,0.03614079,0.02161752,0.019090608,0.0004992162,0.0009140151,0.0059885085,0.00070172164,0.4497397,0.00037032503,0.4555586],"study_design_scores_gemma":[0.0486101,0.009030964,0.05732941,0.018973174,0.023555627,0.000013708742,0.00048068236,0.0070616985,0.0033996303,0.6957054,0.1310332,0.0048064287],"about_ca_topic_score_codex":0.0000022548418,"about_ca_topic_score_gemma":0.000019003279,"teacher_disagreement_score":0.45075217,"about_ca_system_score_codex":0.00046498832,"about_ca_system_score_gemma":0.0006885747,"threshold_uncertainty_score":0.99993914},"labels":[],"label_agreement":null},{"id":"W4230817157","doi":"10.1007/978-1-4939-3136-1","title":"Microarray Technology","year":2015,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Simon Fraser University","funders":"","keywords":"Microarray; Glycan; Computational biology; Computer science; DNA microarray; Microarray analysis techniques; Biology; Gene; Molecular biology; Genetics; Gene expression; Glycoprotein","score_opus":0.024331822254500098,"score_gpt":0.38662813450472155,"score_spread":0.36229631225022146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4230817157","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00018308437,0.02026647,0.7126874,0.00056970544,0.0010984656,0.0005769836,0.00003908848,0.00005905608,0.26451975],"genre_scores_gemma":[0.00012052871,0.000688351,0.58126986,0.0009820476,0.0003899363,0.00024311968,0.0010193444,0.00015645387,0.41513035],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99729675,0.0006273924,0.00049550016,0.0010417257,0.00010595298,0.00043267958],"domain_scores_gemma":[0.99826777,0.000019074841,0.0002724984,0.001142703,0.00018786099,0.00011009445],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009957999,0.00042675642,0.00053412543,0.0005998494,0.00003218065,0.000012579405,0.00068875443,0.0021200925,0.000052430118],"category_scores_gemma":[0.00037623517,0.00042568974,0.00016818442,0.00024681297,0.00032277094,0.0000011125697,0.00038078675,0.0005393837,0.000036002257],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037343372,0.000028284605,0.000061692816,0.000018732326,0.00005171599,0.00001053752,0.000010756457,0.0000075871353,0.9402878,0.0040310356,0.03067806,0.02477643],"study_design_scores_gemma":[0.00037724272,0.00017696236,0.0000033246229,0.000028871316,0.000018364004,0.000021850416,0.000013922793,0.0000035915323,0.25777337,0.034696087,0.7065434,0.00034300433],"about_ca_topic_score_codex":0.0000028890663,"about_ca_topic_score_gemma":0.00000816882,"teacher_disagreement_score":0.6825145,"about_ca_system_score_codex":0.00013435388,"about_ca_system_score_gemma":0.0007741659,"threshold_uncertainty_score":0.9998195},"labels":[],"label_agreement":null},{"id":"W4231147081","doi":"10.1007/978-1-4939-9055-9_13","title":"Mass Spectrometric Determination of Protein Ubiquitination","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Ubiquitin; Chemistry; Peptide; Lysine; Side chain; Ion; Mass spectrometry; Tandem mass spectrometry; Biochemistry; Chromatography; Amino acid; Organic chemistry","score_opus":0.013525004689992973,"score_gpt":0.3844297971461843,"score_spread":0.37090479245619135,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231147081","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.084928334,0.00009393042,0.9063468,0.00004279746,0.000010985791,0.00024181002,0.000004405778,0.000029808863,0.00830112],"genre_scores_gemma":[0.14386201,0.000009055441,0.855762,0.000014093215,0.0000070753104,0.00014505278,0.00001596079,0.000010885177,0.00017384697],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926937,0.000096186435,0.00023927899,0.00021811307,0.000044277138,0.00013277095],"domain_scores_gemma":[0.9994412,0.00007556599,0.00015414158,0.0002688365,0.000045387435,0.000014881726],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039544105,0.000080377074,0.00016303964,0.00018824417,0.000009668349,0.000002865297,0.00016024233,0.00014624346,0.00016720062],"category_scores_gemma":[0.00017143735,0.00008363142,0.00004418776,0.00034510158,0.000034633984,0.000020311762,0.000041868414,0.00013563715,0.000003667899],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004935125,0.000019136167,0.0005972308,0.000034685505,0.0000019553304,5.38359e-7,0.000007859452,0.000003997155,0.91922164,0.039766908,1.0283645e-7,0.040341012],"study_design_scores_gemma":[0.00013484355,0.000033943892,0.000021649254,0.000012934639,0.0000023539328,0.0000012240865,0.000006633443,0.0007249486,0.84319115,0.15531291,0.0004851295,0.000072305724],"about_ca_topic_score_codex":0.000006854062,"about_ca_topic_score_gemma":3.461829e-7,"teacher_disagreement_score":0.115546,"about_ca_system_score_codex":0.000054768883,"about_ca_system_score_gemma":0.000013797206,"threshold_uncertainty_score":0.34103903},"labels":[],"label_agreement":null},{"id":"W4231165825","doi":"10.1007/978-1-4939-6613-4_3","title":"Inferring Functional Relationships from Conservation of Gene Order","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Genome; Gene; Biology; Genetics; Computational biology; Conserved sequence; Base sequence","score_opus":0.05230644906124958,"score_gpt":0.3432265812731089,"score_spread":0.2909201322118593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231165825","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4509377,0.00069238845,0.5478059,0.00017378798,0.000115,0.0000594518,0.000019226974,0.0000015593669,0.00019498447],"genre_scores_gemma":[0.46589455,0.000104902385,0.53365374,0.00016340421,0.00005422825,0.000022958673,0.00004213922,0.000011975175,0.00005211815],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871874,0.0005158448,0.00028281356,0.00029283468,0.000039903727,0.00014983705],"domain_scores_gemma":[0.9993415,0.00016216989,0.00010085779,0.00026084812,0.000108115666,0.000026523443],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005359491,0.00011137373,0.00016798543,0.00006486954,0.000032939446,0.0000023209757,0.00010412431,0.00018210922,0.000022519178],"category_scores_gemma":[0.0007731348,0.00008775777,0.000054747263,0.000104349005,0.00012492071,6.274829e-7,0.00009183276,0.00005974436,0.0000022314775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003258748,0.00001613846,0.121906854,0.0000017517032,0.000052529966,5.1044253e-7,0.000016885151,0.000049974828,0.8726576,0.0013872373,0.000019780493,0.0038581442],"study_design_scores_gemma":[0.0005734189,0.00008634289,0.09694065,0.000007967577,0.000013169369,0.0000023125504,0.000019932073,0.000027979102,0.8856655,0.011785939,0.004744108,0.00013270874],"about_ca_topic_score_codex":0.000067282366,"about_ca_topic_score_gemma":0.000049020196,"teacher_disagreement_score":0.024966203,"about_ca_system_score_codex":0.000011557888,"about_ca_system_score_gemma":0.000051410007,"threshold_uncertainty_score":0.3578658},"labels":[],"label_agreement":null},{"id":"W4231450883","doi":"10.1007/978-1-59745-321-9_5","title":"Essential Genes in the Infection Model of Pseudomonas aeruginosa PCR-Based Signature-Tagged Mutagenesis","year":2008,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Pseudomonas aeruginosa; Mutagenesis; Biology; Microbiology; Gene; Signature (topology); Genetics; Computational biology; Mutation; Bacteria","score_opus":0.02351299966997674,"score_gpt":0.31567837139908744,"score_spread":0.2921653717291107,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231450883","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3291629,0.011897354,0.63460654,0.0004338985,0.0015262865,0.0020676635,0.0002597271,0.000051214305,0.019994408],"genre_scores_gemma":[0.22967714,0.0061585493,0.75439763,0.002464153,0.00080427283,0.00011477799,0.0020090998,0.00033341642,0.004040932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99708587,0.00087627996,0.00070524134,0.0007838221,0.00014652329,0.0004022595],"domain_scores_gemma":[0.9986149,0.00009003371,0.00039313606,0.0007429331,0.00011159236,0.00004738455],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009779037,0.0005162877,0.00069802237,0.0003288052,0.000060448347,0.00001275416,0.00036664162,0.0016117562,0.000017618497],"category_scores_gemma":[0.00013862598,0.00043510343,0.00040244946,0.00010748689,0.0003840469,0.0000028693448,0.0001547153,0.0004011192,0.000001680487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001613515,0.000058734586,0.00010250272,0.000041482133,0.00007070174,0.00003513306,0.0000308798,0.0017991057,0.98952407,0.0011111127,0.00005169142,0.0070132464],"study_design_scores_gemma":[0.000756621,0.00029232248,0.000061014285,0.000060175425,0.00007814056,0.000039734943,0.0000043798686,0.0008743149,0.98252875,0.0008948429,0.013853634,0.000556064],"about_ca_topic_score_codex":0.00012014505,"about_ca_topic_score_gemma":0.00013022881,"teacher_disagreement_score":0.1197911,"about_ca_system_score_codex":0.000033197826,"about_ca_system_score_gemma":0.00021428269,"threshold_uncertainty_score":0.9998101},"labels":[],"label_agreement":null},{"id":"W4231928785","doi":"10.1007/978-1-60327-565-1_17","title":"Phage Typing","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Typing; Phage typing; Biology; Computational biology; Computer science; Microbiology","score_opus":0.01626878642792554,"score_gpt":0.3883552000002732,"score_spread":0.3720864135723476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4231928785","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09656093,0.00007847736,0.8817295,0.00047142062,0.00018519655,0.00008166388,0.000001102547,0.000022266964,0.020869434],"genre_scores_gemma":[0.1395266,0.000011506263,0.85821307,0.0019053487,0.000014172741,0.0000040172545,0.0000032339772,0.0000050569765,0.00031700614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99926174,0.00024896747,0.000117356416,0.00018521448,0.0000131345105,0.00017356635],"domain_scores_gemma":[0.9997785,0.000026823833,0.000027034372,0.00013939946,0.0000017197323,0.000026526832],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00027478338,0.000067322326,0.0000950814,0.000030106658,0.000026012434,0.000006790067,0.0001185675,0.00006727464,0.0012490518],"category_scores_gemma":[0.000053598666,0.00006248936,0.000039407238,0.00013058951,0.000051131665,0.00003154855,0.00005576762,0.000116054805,0.00011604779],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028121162,0.000020231882,0.00020972226,2.5186904e-7,0.0000013784553,0.0000063907078,0.00003161938,0.00001962386,0.88189906,0.00036520188,0.000037915695,0.117405795],"study_design_scores_gemma":[0.00034346277,0.00018351166,0.053614203,0.000009824515,0.000009425189,0.00005483005,0.00002603921,0.00025111192,0.824687,0.015757639,0.104775734,0.00028718935],"about_ca_topic_score_codex":0.00008819984,"about_ca_topic_score_gemma":0.000015905203,"teacher_disagreement_score":0.117118604,"about_ca_system_score_codex":0.000045275912,"about_ca_system_score_gemma":0.000002105676,"threshold_uncertainty_score":0.99966395},"labels":[],"label_agreement":null},{"id":"W4232175685","doi":"10.1007/978-1-60761-820-1","title":"Oral Biology","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Oral Health Pathology and Treatment","field":"Dentistry","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"RIKEN; Medical Center, University of Rochester; School of Dentistry, University of Michigan; Department of Psychiatry, Faculty of Medicine, University of British Columbia; National Institutes of Health; Mailman School of Public Health, Columbia University; Helsingin Yliopisto; Universitetet i Oslo; Jonsson Comprehensive Cancer Center; University of Oklahoma; University of Queensland; University of Oklahoma Health Sciences Center; Western University of Health Sciences; University of California, Los Angeles; University of South Carolina; Griffith University; University of Southern California; University of Rochester; College of Dental Medicine, Columbia University; Universidade Federal do Rio de Janeiro; University of Otago","keywords":"Biology","score_opus":0.05132186021793782,"score_gpt":0.4929496655242234,"score_spread":0.4416278053062856,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232175685","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015312402,0.008299541,0.5377719,0.00036068034,0.011462274,0.0013577625,0.00035218502,0.00024628473,0.43861815],"genre_scores_gemma":[0.000093974784,0.0001006663,0.77465236,0.0012398121,0.00023193532,0.00015266394,0.0007543775,0.000094293486,0.22267988],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.99432033,0.0030808402,0.0007402871,0.0010324409,0.000061899416,0.00076418347],"domain_scores_gemma":[0.99794006,0.0005634847,0.0003377,0.0009618535,0.000065942055,0.00013092751],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity","insufficient_payload"],"category_scores_codex":[0.0018359715,0.000546174,0.0011984297,0.00042400105,0.00007637773,0.00000807133,0.00052768574,0.0042565395,0.0009711299],"category_scores_gemma":[0.00037251067,0.0004908828,0.0002819512,0.00012218459,0.00061135174,0.000014394372,0.00031254502,0.0023325747,0.0008232841],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027368462,0.0004741421,0.014547905,0.00032066187,0.00056905975,0.007525438,0.00010319016,0.0000020993814,0.09515678,0.5520763,0.005645136,0.3233056],"study_design_scores_gemma":[0.0010433262,0.00043788413,0.00048102846,0.000037361977,0.000111601636,0.00033755216,0.000002449739,0.0000065073327,0.004385753,0.40022632,0.59239477,0.0005354659],"about_ca_topic_score_codex":0.00007662038,"about_ca_topic_score_gemma":0.00030658278,"teacher_disagreement_score":0.5867496,"about_ca_system_score_codex":0.00019267478,"about_ca_system_score_gemma":0.00037873126,"threshold_uncertainty_score":0.99996907},"labels":[],"label_agreement":null},{"id":"W4232239131","doi":"10.1007/978-1-61779-204-5","title":"Proprotein Convertases","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute; Ottawa Hospital","funders":"","keywords":"Proprotein Convertases; Computational biology; Biology; Biochemistry; Lipoprotein; LDL receptor; Cholesterol","score_opus":0.028252308450344387,"score_gpt":0.35231016130568327,"score_spread":0.3240578528553389,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232239131","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00009961906,0.0016223817,0.6985732,0.000024992501,0.0013910143,0.0005114116,0.000040821786,0.0000767803,0.2976598],"genre_scores_gemma":[0.000023247927,0.000023048797,0.839273,0.0005304315,0.00014483294,0.00008947456,0.00009041439,0.000049509432,0.15977605],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777424,0.0009098164,0.0003521165,0.0005775352,0.00007375532,0.0003125489],"domain_scores_gemma":[0.99913996,0.000090511094,0.0001910931,0.0004808708,0.000050843362,0.00004668887],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009027359,0.00028674764,0.00052517274,0.00017670025,0.0000304121,0.000011980522,0.00033738735,0.0007627095,0.0023490135],"category_scores_gemma":[0.00022385722,0.00023577793,0.000099059864,0.00006122249,0.00025626598,0.000021107495,0.00013656556,0.0003713772,0.00016695714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028391616,0.000009686671,0.000006705001,0.00004960444,0.000014436575,0.00004597784,0.000040117975,7.4030083e-7,0.95454305,0.037741564,0.0009871873,0.0065325205],"study_design_scores_gemma":[0.0001448696,0.00015075298,0.00000397168,0.00001909994,0.000048309077,0.000016883936,0.0000022257484,0.0000019042677,0.6747347,0.18595338,0.13866596,0.0002579377],"about_ca_topic_score_codex":0.00007300241,"about_ca_topic_score_gemma":0.000019063242,"teacher_disagreement_score":0.27980837,"about_ca_system_score_codex":0.00007473866,"about_ca_system_score_gemma":0.00017591739,"threshold_uncertainty_score":0.998563},"labels":[],"label_agreement":null},{"id":"W4232379191","doi":"10.1007/978-1-61779-231-1","title":"Seed Dormancy","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Seed Germination and Physiology","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Dormancy; Agriculture; Seed dormancy; Forestry; Biology; Geography; Agronomy; Germination; Ecology","score_opus":0.041782827801587756,"score_gpt":0.35131365249388047,"score_spread":0.3095308246922927,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232379191","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002874617,0.0039221584,0.0084201535,0.0003634734,0.0013883197,0.00067809323,0.000087053435,0.00016266055,0.98210347],"genre_scores_gemma":[0.00063667784,0.0006791718,0.2669211,0.0043063797,0.00097596855,0.00018482232,0.0018369255,0.000016468008,0.7244425],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977518,0.00093832664,0.00036501192,0.0005312427,0.0000557113,0.00035796448],"domain_scores_gemma":[0.99919397,0.0003668506,0.00018632926,0.00012854888,0.000054948494,0.00006937437],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006220468,0.0002899502,0.00051059015,0.00006065558,0.000040078492,0.000008036586,0.00046831055,0.0009164639,0.001321283],"category_scores_gemma":[0.00011013292,0.00012031156,0.00018745575,0.00017324148,0.00015538158,0.000015340871,0.0001657373,0.0004567493,0.00013343265],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021739741,0.0000412162,0.00009983467,0.000012664805,0.00002697099,0.000024138908,0.00003857795,3.8579802e-7,0.80213106,0.01939944,0.00069699297,0.17750698],"study_design_scores_gemma":[0.00015321001,0.0003379715,0.0029138394,0.000034026856,0.000020246222,0.000013687098,0.0000096474105,0.000012939143,0.01393328,0.21387167,0.7682151,0.00048434772],"about_ca_topic_score_codex":0.00004601354,"about_ca_topic_score_gemma":0.000026907137,"teacher_disagreement_score":0.78819776,"about_ca_system_score_codex":0.000045831264,"about_ca_system_score_gemma":0.00003834607,"threshold_uncertainty_score":0.99959165},"labels":[],"label_agreement":null},{"id":"W4232496531","doi":"10.1007/978-1-61779-185-7","title":"Claudins","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Neurological Disease Mechanisms and Treatments","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Institutes of Health; University of Southampton; McGill University; York University; Brody School of Medicine; Weizmann Institute of Science; East Carolina University; School of Dentistry, Nihon University; Universidade de São Paulo; Nihon University","keywords":"Claudin; Tight junction; Polarity (international relations); Cell biology; Chemistry; Biology; Cell; Biochemistry","score_opus":0.08966531557250691,"score_gpt":0.4072384285216347,"score_spread":0.3175731129491278,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232496531","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000110250636,0.00052132475,0.32300085,0.00005168957,0.0007802582,0.000555271,0.00008025772,0.000111642905,0.6747885],"genre_scores_gemma":[0.00038083698,0.00048347088,0.62801933,0.0089092245,0.000109929,0.00026801202,0.000066295244,0.00017484323,0.36158806],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9963411,0.0016981475,0.00034043734,0.0010621604,0.00009359441,0.00046455057],"domain_scores_gemma":[0.9987701,0.0003622887,0.00016666857,0.00056480285,0.000014516497,0.00012162305],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00030361023,0.00039409733,0.0005633161,0.00023479118,0.000043366766,0.000011241575,0.0005243706,0.00066805625,0.00066570146],"category_scores_gemma":[0.0006647562,0.00032178801,0.00023570428,0.00011963302,0.00022196757,0.0000150136875,0.00030772333,0.0005541517,0.00023536896],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040068266,0.0001397463,0.000012586346,0.000016082195,0.00001611709,0.0015106313,0.000011170449,7.0157046e-7,0.57194525,0.4052917,0.00018276063,0.020833181],"study_design_scores_gemma":[0.00029433574,0.00031652686,0.000010962789,0.000013753838,0.00003488134,0.000021370286,2.5458493e-7,0.000008224908,0.23905301,0.6748023,0.085170574,0.00027381984],"about_ca_topic_score_codex":0.0000054044394,"about_ca_topic_score_gemma":0.0000013964712,"teacher_disagreement_score":0.33289227,"about_ca_system_score_codex":0.00006945525,"about_ca_system_score_gemma":0.00010024818,"threshold_uncertainty_score":0.9999234},"labels":[],"label_agreement":null},{"id":"W4232505478","doi":"10.1007/978-1-60327-977-2","title":"Zebrafish","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetics and Physical Performance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Department of Systems Biology, Harvard Medical School; Directorate for Biological Sciences; Genome Institute of Singapore; Ludwig Institute for Cancer Research; University of California, Los Angeles; National University of Singapore; Johns Hopkins University; Zentrum für Regenerative Therapien Dresden; Stowers Institute for Medical Research; Vanderbilt University","keywords":"Zebrafish; Danio; Biology; Evolutionary biology; Genetics; Gene","score_opus":0.01394448431333222,"score_gpt":0.35636830947495407,"score_spread":0.34242382516162184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232505478","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010284918,0.007950357,0.42374396,0.0001683047,0.00052756263,0.0005746742,0.00003979111,0.000029287488,0.5659376],"genre_scores_gemma":[0.000577825,0.0010331812,0.7132539,0.0038101987,0.0009896571,0.00006743718,0.0014310764,0.000166009,0.2786707],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.997763,0.00041430868,0.0004306609,0.000818311,0.000093615774,0.00048012653],"domain_scores_gemma":[0.99880373,0.000033065957,0.00017013759,0.0008212986,0.00006962044,0.00010215416],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005702604,0.00043896947,0.00054040056,0.000137306,0.000033741657,0.000015938727,0.00054722204,0.0010856977,0.000039628932],"category_scores_gemma":[0.00012122941,0.00044359782,0.0002673344,0.00009276651,0.00017348261,8.9895804e-7,0.00024526872,0.0004998332,0.000029222574],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040145842,0.00006684017,0.000045556495,0.000035315803,0.00007843978,0.000019778425,0.000011197733,0.00009260863,0.9301268,0.006222356,0.013742169,0.04951881],"study_design_scores_gemma":[0.00038399472,0.0006076008,0.00007962868,0.00003559745,0.000029194987,0.000011826213,0.0000012368424,0.000045781806,0.14751904,0.061650995,0.7890309,0.00060421793],"about_ca_topic_score_codex":0.0000034875602,"about_ca_topic_score_gemma":0.000007787594,"teacher_disagreement_score":0.78260773,"about_ca_system_score_codex":0.000039919985,"about_ca_system_score_gemma":0.00022880438,"threshold_uncertainty_score":0.9998016},"labels":[],"label_agreement":null},{"id":"W4232606957","doi":"10.1007/978-1-61779-117-8","title":"Cystic Fibrosis","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of North Carolina at Chapel Hill; Hospital for Sick Children; Université de Montréal; Centre National de la Recherche Scientifique; University of Toronto; Semmelweis Egyetem; Institut National de la Santé et de la Recherche Médicale; University of Bristol; University of Manchester; Newcastle University; Vertex Pharmaceuticals; Johns Hopkins University; University of Pittsburgh; McGill University; Centre Hospitalier Universitaire de Nice; University of Missouri; International Centre for Genetic Engineering and Biotechnology; Imperial College London; Dartmouth College; European Molecular Biology Laboratory; Cystic Fibrosis Foundation Therapeutics","keywords":"Cystic fibrosis; GRASP; Medicine; Intensive care medicine; Fibrosis; Pathology; Engineering; Internal medicine","score_opus":0.038013812007677374,"score_gpt":0.43074979153003656,"score_spread":0.39273597952235917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232606957","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019097455,0.010227886,0.6884684,0.00009071976,0.0003454068,0.0007406776,0.00004247259,0.00006688285,0.29999846],"genre_scores_gemma":[0.000006900627,0.0002052542,0.8043134,0.00027421702,0.000112989466,0.00009636529,0.00021279936,0.00008741238,0.19469064],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967101,0.0010470406,0.0005777524,0.0008095469,0.00020180336,0.0006537516],"domain_scores_gemma":[0.9977451,0.0008383085,0.00017033276,0.0009110998,0.0001252872,0.00020987657],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001293337,0.00042633238,0.0011671602,0.0006429548,0.00002701917,0.000008954892,0.00035785887,0.000873341,0.0008504429],"category_scores_gemma":[0.0028249188,0.00037586846,0.0002883888,0.00020535573,0.00050456147,0.000016890626,0.00029644574,0.0010879992,0.00015555655],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069984456,0.00014574359,0.00020799566,0.0009029332,0.00032434374,0.0010116043,0.000086886204,0.000002838417,0.7912634,0.021711556,0.0043420675,0.1793008],"study_design_scores_gemma":[0.0012367372,0.0015244823,0.00021401826,0.0007531969,0.00021232486,0.00021817465,0.000007453635,0.00006206585,0.04505634,0.18004648,0.7700737,0.00059498724],"about_ca_topic_score_codex":0.000037158385,"about_ca_topic_score_gemma":0.0000070893648,"teacher_disagreement_score":0.7657317,"about_ca_system_score_codex":0.00033423965,"about_ca_system_score_gemma":0.00069694116,"threshold_uncertainty_score":0.99986935},"labels":[],"label_agreement":null},{"id":"W4232609757","doi":"10.1007/978-1-60761-454-8_8","title":"Glycoprotein Characterization","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institute for Biological Sciences","funders":"","keywords":"Glycan; Glycoprotein; Flagellin; Mass spectrometry; Virulence; Chemistry; Characterization (materials science); Biochemistry; Strain (injury); Computational biology; Microbiology; Biology; Chromatography; Gene; Nanotechnology; Materials science","score_opus":0.018244110179676632,"score_gpt":0.40337093620614084,"score_spread":0.3851268260264642,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232609757","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16679601,0.00023236824,0.82988507,0.00059574906,0.00008565525,0.00034484174,0.0000054698007,0.000017871125,0.0020369592],"genre_scores_gemma":[0.360306,0.000111686495,0.6357098,0.002091648,0.00015103434,0.000084454645,0.00051156717,0.000029616187,0.0010042014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812645,0.0007290996,0.00026816616,0.00044171192,0.000083590836,0.000350956],"domain_scores_gemma":[0.9993712,0.00001177575,0.00006468566,0.00040799295,0.000069556256,0.00007480151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008077738,0.00015919571,0.00018137001,0.00016729052,0.000041476942,0.00001806923,0.00024440364,0.00027921348,0.00007029078],"category_scores_gemma":[0.00041540244,0.00015598875,0.00007700724,0.00027629847,0.000066293,0.0000031813256,0.00007192941,0.00016545849,0.000017340155],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006621794,0.000047219284,0.0004931786,0.000002934075,0.000006829151,0.000008216437,0.000010064985,0.000010856666,0.89368314,0.0022171696,0.000012813902,0.10344139],"study_design_scores_gemma":[0.00054727023,0.00045526735,0.0046186848,0.0000064068795,0.0000024522055,0.000014614353,0.0000056172144,0.0001927297,0.9498854,0.0030808246,0.0409947,0.00019597847],"about_ca_topic_score_codex":0.0000097034645,"about_ca_topic_score_gemma":0.0000045641523,"teacher_disagreement_score":0.19417527,"about_ca_system_score_codex":0.000018694178,"about_ca_system_score_gemma":0.000051755946,"threshold_uncertainty_score":0.63610363},"labels":[],"label_agreement":null},{"id":"W4232797494","doi":"10.1007/978-1-0716-1138-8_18","title":"Evaluation of Diagnostic Tests","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Diagnostic test; Receiver operating characteristic; Diagnostic accuracy; Positive predicative value; Test (biology); Medicine; Sensitivity (control systems); Medical physics; Predictive value; Radiology; Engineering; Internal medicine; Pediatrics; Biology","score_opus":0.7866658899719441,"score_gpt":0.6488880739552437,"score_spread":0.13777781601670036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4232797494","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012420987,0.021043368,0.6700184,0.000111307956,0.00045691998,0.0007540059,0.000017463277,0.0000016545491,0.30747268],"genre_scores_gemma":[0.000611458,0.00022584708,0.90350777,0.0002278805,0.00006178411,0.00008535324,0.00005646482,0.000034837965,0.09518858],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.84910965,0.12372038,0.016765807,0.0025840169,0.0074316654,0.0003884528],"domain_scores_gemma":[0.9560807,0.0303909,0.005545732,0.0042770756,0.0036363702,0.00006926122],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.37287742,0.00037843015,0.0050001848,0.00074606016,0.00002061692,0.00006609366,0.0013219877,0.0005443929,0.020859724],"category_scores_gemma":[0.4512412,0.00021658915,0.0018482547,0.00037389182,0.000140467,0.000019081033,0.00027503635,0.0003093459,0.00034275814],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000017013285,0.000032767915,0.00070153526,0.000053969845,0.00062534784,0.000036774472,0.00006856253,0.00021632526,0.010709763,0.21726799,0.0011863593,0.76909894],"study_design_scores_gemma":[0.0001959144,0.000058727128,0.00029194955,0.0001538537,0.0014713061,0.000015206933,0.000020578298,0.0017758515,0.0012027533,0.8390745,0.15544996,0.0002894056],"about_ca_topic_score_codex":0.000005632669,"about_ca_topic_score_gemma":0.000027234582,"teacher_disagreement_score":0.7688095,"about_ca_system_score_codex":0.000068711925,"about_ca_system_score_gemma":0.00028277913,"threshold_uncertainty_score":0.98003536},"labels":[],"label_agreement":null},{"id":"W4233096426","doi":"10.1007/978-1-0716-0868-5","title":"Yeast Protocols","year":2020,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Yeast; Genetics; Biology; Computational biology; Computer science","score_opus":0.04582801751232897,"score_gpt":0.44759981316152747,"score_spread":0.4017717956491985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233096426","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008579936,0.0038165597,0.53974986,0.0004421759,0.00041259636,0.011371972,0.00023900424,0.000048391288,0.44383365],"genre_scores_gemma":[0.000039936378,0.000271261,0.65556437,0.001565468,0.0009720127,0.0055284724,0.0013865165,0.00025680306,0.33441514],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966486,0.0010241404,0.00049194373,0.0010856561,0.00017539243,0.00057426404],"domain_scores_gemma":[0.9987036,0.000035540186,0.00015445102,0.0008000915,0.00011169447,0.00019461705],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00076655473,0.00046596874,0.0006053299,0.00017731544,0.00003667572,0.000026484804,0.0008258086,0.0012088928,0.00011750363],"category_scores_gemma":[0.0004808726,0.00045637,0.00027843547,0.00014574129,0.0002789019,8.7349605e-7,0.000792088,0.00075644994,0.00009759162],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011340862,0.00003817604,0.000052784304,0.00010762099,0.00008930111,0.000060341623,0.000012228508,0.000014658639,0.9760115,0.0017338766,0.0068862014,0.014879874],"study_design_scores_gemma":[0.00038729748,0.0005393549,0.000007956633,0.00004728336,0.000011464625,0.000015343281,0.0000025155907,0.000026750247,0.34485766,0.0063001835,0.6474291,0.00037507882],"about_ca_topic_score_codex":0.0000046838645,"about_ca_topic_score_gemma":0.000008314106,"teacher_disagreement_score":0.6405429,"about_ca_system_score_codex":0.000057449797,"about_ca_system_score_gemma":0.0006633136,"threshold_uncertainty_score":0.9997888},"labels":[],"label_agreement":null},{"id":"W4233559295","doi":"10.1007/978-1-62703-691-7_5","title":"Medium-Throughput Production of Recombinant Human Proteins: Protein Production in E. coli","year":2013,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Protein purification and stability","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Recombinant DNA; Protein purification; Chemistry; Affinity chromatography; Size-exclusion chromatography; FLAG-tag; Chromatography; Crystallization; Protein crystallization; Escherichia coli; Biochemistry; Combinatorial chemistry; Enzyme; Gene; Organic chemistry","score_opus":0.032359385730347766,"score_gpt":0.35746481614800024,"score_spread":0.3251054304176525,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233559295","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31010205,0.042383257,0.37520975,0.010187086,0.01332063,0.078730926,0.00014573144,0.00038985765,0.16953072],"genre_scores_gemma":[0.0551856,0.0011368268,0.7473866,0.00019510303,0.000650938,0.0047234423,0.0011749404,0.0003229123,0.18922368],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957183,0.0011350011,0.0011586638,0.0014119968,0.00017089874,0.00040511639],"domain_scores_gemma":[0.9976477,0.00001275079,0.00065655453,0.0013157504,0.00029821132,0.00006905791],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026044804,0.00048726852,0.0007707624,0.00035426454,0.000052430994,0.000010049014,0.00042723538,0.0012228271,0.00010908989],"category_scores_gemma":[0.0012555388,0.00048419536,0.00019342055,0.00014133235,0.00053809874,0.000007742704,0.00022377817,0.00061535655,0.000010610984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000080987855,0.00016466193,0.00007117378,0.0002053276,0.000049720045,0.0000034588595,0.00004067461,0.000007619896,0.972803,0.011483006,0.00008198796,0.015008369],"study_design_scores_gemma":[0.0004242243,0.0005335069,0.00021884231,0.00020523688,0.00001829221,0.000010651064,0.000012617573,0.0000032082419,0.88278323,0.06372241,0.051586423,0.00048134712],"about_ca_topic_score_codex":0.0001350572,"about_ca_topic_score_gemma":0.00012482732,"teacher_disagreement_score":0.37217683,"about_ca_system_score_codex":0.00012337608,"about_ca_system_score_gemma":0.00022645744,"threshold_uncertainty_score":0.999761},"labels":[],"label_agreement":null},{"id":"W4233825808","doi":"10.1007/978-1-61779-555-8_17","title":"Model-Free Linkage Analysis of a Binary Trait","year":2011,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Princess Margaret Cancer Centre; Public Health Ontario; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Linkage (software); Genetic linkage; Pedigree chart; Genetics; Genetic model; Complete linkage; Statistic; Computer science; Biology; Computational biology; Statistics; Gene; Mathematics; Single-nucleotide polymorphism","score_opus":0.04838525915478793,"score_gpt":0.36741826700292085,"score_spread":0.31903300784813293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4233825808","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004149177,0.0041477787,0.87190866,0.00009184004,0.00017828662,0.0003367178,0.00044132432,0.000014535305,0.118731655],"genre_scores_gemma":[0.0067811687,0.001416424,0.953963,0.00058671803,0.00007905879,0.000058991754,0.0014262472,0.00010922251,0.035579212],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9968956,0.00067593495,0.0009867448,0.0009160955,0.000087904176,0.0004377034],"domain_scores_gemma":[0.99758816,0.000110544875,0.0006289605,0.001428167,0.00015204182,0.00009212514],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0016791389,0.00046670358,0.0013701499,0.0007627551,0.00003194495,0.0000032385763,0.0007860847,0.0019405206,0.00018524272],"category_scores_gemma":[0.00060150743,0.00047111837,0.0008506536,0.0001899276,0.0003340425,0.0000011197216,0.00054829713,0.00040150216,0.0000032151404],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013214216,0.00013906763,0.0020842946,0.000062611885,0.0061237393,0.000027036891,0.0001451421,0.0061199437,0.9036008,0.06829518,0.00063864916,0.012631377],"study_design_scores_gemma":[0.0036782438,0.0036401802,0.0077603795,0.00016768376,0.011168401,0.000034409815,0.000059478443,0.022977022,0.047515735,0.8000992,0.09833417,0.004565094],"about_ca_topic_score_codex":0.000056319233,"about_ca_topic_score_gemma":0.00010831952,"teacher_disagreement_score":0.85608506,"about_ca_system_score_codex":0.000035152414,"about_ca_system_score_gemma":0.00015113338,"threshold_uncertainty_score":0.99977404},"labels":[],"label_agreement":null},{"id":"W4234025408","doi":"10.1007/978-1-61779-452-0","title":"Astrocytes","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Diego; McGill University Health Centre; National Institutes of Health; Centre National de la Recherche Scientifique; Intellectual and Developmental Disabilities Research Center; Universidad de la República Uruguay; King's College London; University of Alabama; University of Alabama at Birmingham; Università degli Studi di Padova; University of Washington; University of Rochester; Northwestern University; University of Missouri; Yonsei University; Institut National de la Santé et de la Recherche Médicale; Medical Center, University of Rochester; Case Western Reserve University; University of Minnesota; Syracuse University; Yonsei University College of Medicine; McGill University; Texas Tech University; China Medical University; University of Connecticut; Wayne State University","keywords":"Biology; Neuroscience","score_opus":0.0251599291783187,"score_gpt":0.3518836443461508,"score_spread":0.3267237151678321,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234025408","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022121163,0.0644831,0.29541773,0.000027976446,0.004674636,0.0004622629,0.000041202336,0.00010433172,0.63476664],"genre_scores_gemma":[0.000015234677,0.00044373618,0.3596646,0.00046117182,0.000058804042,0.000101708356,0.00042309213,0.0001118823,0.6387198],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99563617,0.0020761078,0.0006771696,0.0008500991,0.000022410906,0.000738053],"domain_scores_gemma":[0.99818367,0.00042553828,0.00033491434,0.00096230314,0.00007276555,0.000020789508],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0012204065,0.0005625739,0.001060851,0.00045402287,0.00005291817,0.0000058562664,0.0008845329,0.0025689816,0.0037440108],"category_scores_gemma":[0.00025935227,0.0005472509,0.00030192835,0.000104468694,0.00080776686,0.000017360078,0.00046705766,0.0016964535,0.0010707832],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010958728,0.000059446626,0.000053200787,0.000058081194,0.00044720573,0.00005938749,0.00014724149,0.0000014082433,0.89381945,0.035776682,0.009309842,0.06015849],"study_design_scores_gemma":[0.00050045387,0.00015445412,0.000009006168,0.0000621216,0.000058306392,0.0000496272,0.000005484011,2.00986e-7,0.3616888,0.024403796,0.61268926,0.00037849412],"about_ca_topic_score_codex":0.00004338635,"about_ca_topic_score_gemma":0.000009226974,"teacher_disagreement_score":0.6033794,"about_ca_system_score_codex":0.00025434353,"about_ca_system_score_gemma":0.00038551877,"threshold_uncertainty_score":0.999707},"labels":[],"label_agreement":null},{"id":"W4234185571","doi":"10.1007/978-1-4939-9048-1_24","title":"The Caenorhabditis elegans Model of Legionella Infection","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Science Council; Manitoba Medical Service Foundation; Manitoba Health Research Council; Howard Hughes Medical Institute","keywords":"Caenorhabditis elegans; Biology; Innate immune system; Model organism; Caenorhabditis; Host (biology); Legionella pneumophila; Immune system; Genetic screen; Gene; Virulence; Genetics; Phenotype; Bacteria","score_opus":0.014556830687288119,"score_gpt":0.3317439278358567,"score_spread":0.3171870971485686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234185571","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43664467,0.0005782692,0.56146866,0.000090238114,0.0002815696,0.00018034686,0.0000045663755,0.000006407912,0.0007452843],"genre_scores_gemma":[0.7982153,0.0006523035,0.20016211,0.00027443643,0.00005616478,0.000024208517,0.000033581156,0.000033482764,0.0005483976],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832916,0.00051159714,0.00034846616,0.0004022067,0.000078563964,0.00032998706],"domain_scores_gemma":[0.9990453,0.00004935223,0.00013755968,0.0006329791,0.00009077473,0.00004403153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095143425,0.00018133792,0.00024403784,0.000074338626,0.000057485726,0.000012005805,0.00029869613,0.0002975065,0.0000064419037],"category_scores_gemma":[0.00015738899,0.0001514351,0.0001335892,0.00012506027,0.00019579259,0.0000021702217,0.00016821078,0.00017562369,0.000007016682],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025918702,0.000032997585,0.010822817,0.000014120788,0.000036742375,6.7195174e-7,0.000082664235,0.007992109,0.9748926,0.0027112002,0.000045938108,0.0033422168],"study_design_scores_gemma":[0.00048563245,0.00034390402,0.0011310942,0.000007477012,0.000019968431,0.000011914596,0.000029860232,0.0075167045,0.97316384,0.009063733,0.007980473,0.00024537314],"about_ca_topic_score_codex":0.00014051501,"about_ca_topic_score_gemma":0.00011321743,"teacher_disagreement_score":0.36157066,"about_ca_system_score_codex":0.000017676572,"about_ca_system_score_gemma":0.00007755205,"threshold_uncertainty_score":0.61753446},"labels":[],"label_agreement":null},{"id":"W4234235296","doi":"10.1007/978-1-4939-2428-8_3","title":"Definitions of Bias in Clinical Research","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Misinformation; Selection bias; Information bias; Affect (linguistics); Confounding; Psychology; Statistics; Cognitive psychology; Computer science; Mathematics; Communication; Computer security","score_opus":0.9385195026426778,"score_gpt":0.7088785450431259,"score_spread":0.22964095759955194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234235296","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32357526,0.0052370443,0.6279978,0.015553668,0.001017555,0.0008218452,0.000098843804,0.000022031041,0.025675936],"genre_scores_gemma":[0.0934663,0.000389766,0.9031246,0.00271016,0.00009015102,0.0001253846,0.000023589799,0.000023356797,0.000046692738],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9815403,0.012664035,0.0047824625,0.00052432367,0.000057118777,0.00043172683],"domain_scores_gemma":[0.99248505,0.0059376075,0.0007859478,0.00054419064,0.00011321316,0.00013399585],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.17985097,0.00009938614,0.0009844883,0.00094559963,0.00002499933,0.000009044998,0.0003205305,0.0003242426,0.000067027686],"category_scores_gemma":[0.069836155,0.00012396227,0.00010365548,0.00061033596,0.0002961463,0.000055738154,0.00012411857,0.00046553428,0.0002736289],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014355349,0.00014948551,0.25898162,0.000037882826,0.000015134648,0.0000035309215,0.00048135014,0.000072177856,0.00009924908,0.738706,0.00073689065,0.00070237025],"study_design_scores_gemma":[0.0011384103,0.00023529955,0.021637643,0.000040149833,0.0000014503395,0.000003302286,0.0007182419,0.0013683285,0.00017668062,0.95984054,0.014669343,0.00017063967],"about_ca_topic_score_codex":0.0012784919,"about_ca_topic_score_gemma":0.00022926733,"teacher_disagreement_score":0.27512679,"about_ca_system_score_codex":0.00024643305,"about_ca_system_score_gemma":0.00025752725,"threshold_uncertainty_score":0.937999},"labels":[],"label_agreement":null},{"id":"W4234966440","doi":"10.1007/978-1-4939-2428-8_17","title":"Evaluation of Diagnostic Tests","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Diagnostic test; Receiver operating characteristic; Diagnostic accuracy; Positive predicative value; Test (biology); Sensitivity (control systems); Medicine; Medical physics; Statistics; Predictive value; Engineering; Radiology; Mathematics; Internal medicine; Pediatrics; Biology","score_opus":0.8743270935368392,"score_gpt":0.6978796840212415,"score_spread":0.1764474095155978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4234966440","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06269116,0.0031545626,0.925106,0.00018197273,0.00027779586,0.0004369671,0.000002073318,0.0000014523137,0.008148018],"genre_scores_gemma":[0.2063571,0.000005122654,0.7933099,0.00011856159,0.00001567103,0.0000554151,0.0000030022736,0.0000050233066,0.000130157],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.8033756,0.18435,0.007042346,0.0008967471,0.0040878328,0.00024745677],"domain_scores_gemma":[0.9719722,0.019850671,0.0023423801,0.0026375544,0.0030939733,0.00010317391],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.5197731,0.00012836944,0.0017284112,0.0003802679,0.00001065953,0.0000357498,0.0008745644,0.000108010754,0.0011212771],"category_scores_gemma":[0.6900729,0.00006579804,0.00043846076,0.0011359468,0.00007601862,0.00002962632,0.000114648836,0.00008249346,0.00023690063],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000044169533,0.000105746134,0.089143425,0.000012088129,0.00016490546,0.000007094718,0.0004819341,0.0023018653,0.056153134,0.013325097,0.0023171988,0.8359831],"study_design_scores_gemma":[0.00066870026,0.00015847525,0.013041633,0.000021715512,0.00049852225,0.000012080841,0.00031041523,0.03963153,0.011536932,0.9129965,0.020916335,0.00020721319],"about_ca_topic_score_codex":0.000016578777,"about_ca_topic_score_gemma":0.000015843962,"teacher_disagreement_score":0.8996714,"about_ca_system_score_codex":0.000038549064,"about_ca_system_score_gemma":0.00014244781,"threshold_uncertainty_score":0.99979186},"labels":[],"label_agreement":null},{"id":"W4235133599","doi":"10.1007/978-1-59745-521-3","title":"Mitochondrial DNA","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Medical Research Council; University of California, San Diego; School of Medicine, Emory University; College of Engineering, Michigan State University; School of Medicine, New York University; Directorate for Biological Sciences; National Institutes of Health; Centre National de la Recherche Scientifique; University of California, Irvine; McGill University; McGill University Health Centre; Buck Institute for Research on Aging; University of South Alabama; Tampereen Yliopisto; Oregon State University; Michigan State University; Emory University; York University; Wellcome Trust; Brock University; Yale University","keywords":"Mitochondrial DNA; Genetics; Biology; Bioenergetics; DNA; Mitochondrion; Gene","score_opus":0.018690790518623136,"score_gpt":0.3522432220799654,"score_spread":0.33355243156134223,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235133599","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000054914835,0.0028852068,0.6876477,0.000142386,0.0027626583,0.0006051906,0.000035976213,0.000039425413,0.30582654],"genre_scores_gemma":[0.000001955099,0.00031616955,0.6241629,0.002469345,0.0017167958,0.00007124674,0.0013628276,0.000102498656,0.36979628],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99550945,0.0016537273,0.0007259873,0.0013508848,0.0001228295,0.00063715427],"domain_scores_gemma":[0.9982309,0.00008815878,0.00029285625,0.0011328167,0.000104803665,0.00015047324],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00070923375,0.0006372717,0.00085644424,0.00036167918,0.00005390589,0.000020676393,0.0006200446,0.0026024065,0.00026534303],"category_scores_gemma":[0.00069933577,0.000654824,0.00045315965,0.00013330692,0.00026231195,0.000001686099,0.00025889534,0.000754934,0.00008730988],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018636948,0.000048662823,0.000012553663,0.000017724404,0.000076082724,0.00007395247,0.000013090087,0.000013905668,0.9417805,0.006355153,0.03636275,0.015059275],"study_design_scores_gemma":[0.00090296543,0.00076714344,0.0000050249146,0.000029020028,0.000048905917,0.000087784996,0.000002822804,0.0000051456045,0.12818885,0.024767697,0.84456974,0.0006249094],"about_ca_topic_score_codex":0.000006020056,"about_ca_topic_score_gemma":0.000031195552,"teacher_disagreement_score":0.81359166,"about_ca_system_score_codex":0.000080499354,"about_ca_system_score_gemma":0.0004581701,"threshold_uncertainty_score":0.9995903},"labels":[],"label_agreement":null},{"id":"W4235649569","doi":"10.1007/978-1-4939-2596-4_2","title":"Microscopy Techniques to Examine DNA Replication in Fission Yeast","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Chromatin; Yeast; Fluorescence microscope; DNA; DNA replication; Cell biology; Replication (statistics); Fission; Replication timing; Control of chromosome duplication; Biology; Computational biology; Biophysics; Chromosome; Fluorescence; Genetics; Physics; Optics; Gene; Neutron","score_opus":0.04642758227657666,"score_gpt":0.46245034319732736,"score_spread":0.4160227609207507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235649569","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56825316,0.0006983733,0.42780063,0.0005823531,0.000113008784,0.00046986918,0.000010951575,0.000016902257,0.00205478],"genre_scores_gemma":[0.15146828,0.000077566765,0.8468249,0.00072822475,0.00008956592,0.00018378621,0.00012500332,0.000032924807,0.00046975238],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99787843,0.00078285486,0.0002800978,0.00063224207,0.000084329535,0.0003420652],"domain_scores_gemma":[0.99901056,0.000018287294,0.000042920212,0.0006878581,0.0000946443,0.00014571521],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017608358,0.00015234594,0.00019563464,0.00022484465,0.000016122294,0.000011172785,0.00032685653,0.00028286772,0.000007513859],"category_scores_gemma":[0.0010507263,0.00014389389,0.000041945867,0.00035334463,0.00007142706,0.0000017118907,0.00033248108,0.00015576767,0.0000115964785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010320459,0.000059375874,0.0031999086,0.000006449523,0.000004583863,0.000006490956,0.000037468624,0.000019241621,0.96390134,0.00010506157,0.00027473486,0.03228217],"study_design_scores_gemma":[0.00028729084,0.0004774163,0.0008604531,0.000014829806,0.0000016173958,0.000009467736,0.00002614417,0.00004529315,0.94318306,0.0008766103,0.054060094,0.00015774257],"about_ca_topic_score_codex":0.00006699135,"about_ca_topic_score_gemma":0.000043808264,"teacher_disagreement_score":0.4190243,"about_ca_system_score_codex":0.000046045614,"about_ca_system_score_gemma":0.00008808516,"threshold_uncertainty_score":0.5867822},"labels":[],"label_agreement":null},{"id":"W4235666967","doi":"10.1007/978-1-4939-1363-3_1","title":"Yeast Transformation by the LiAc/SS Carrier DNA/PEG Method","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":257,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Transformation (genetics); Yeast; Protocol (science); Transformation efficiency; DNA; Computational biology; Computer science; Microtiter plate; Biology; Molecular biology; Genetics; Gene; Medicine; Agrobacterium","score_opus":0.008353399979741575,"score_gpt":0.39979978677887906,"score_spread":0.3914463867991375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4235666967","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02007344,0.0010335583,0.9761132,0.00030995713,0.000359251,0.00020073554,0.000018426597,0.000014860315,0.0018765767],"genre_scores_gemma":[0.23109438,0.00013069053,0.7662315,0.0014310529,0.00020454187,0.00013336496,0.00021492626,0.00006261668,0.00049697724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978835,0.0010786918,0.00028403374,0.0003563033,0.000066494285,0.00033099222],"domain_scores_gemma":[0.99934405,0.00006098058,0.00005142655,0.00044618783,0.000036043384,0.00006128525],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016721968,0.00019463919,0.00021105385,0.000056940196,0.000053881005,0.000015151065,0.0003023103,0.00026965782,0.000016337226],"category_scores_gemma":[0.00026403353,0.00015303756,0.00011549477,0.00014665558,0.000082785664,0.0000021299338,0.00007385815,0.00017947801,0.0000033270292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000144844,0.00001274613,0.000086951986,0.000009405696,0.000025800931,4.4793842e-7,0.000092290735,0.0004928985,0.94926906,0.0010562394,0.0002443033,0.048695393],"study_design_scores_gemma":[0.00033202392,0.00011804702,0.00010748745,0.0000039911947,0.000015629526,0.00001727024,0.00004941742,0.0016521502,0.81619954,0.0008733897,0.18045558,0.00017550359],"about_ca_topic_score_codex":0.00003044558,"about_ca_topic_score_gemma":0.000017149692,"teacher_disagreement_score":0.21102095,"about_ca_system_score_codex":0.000012005206,"about_ca_system_score_gemma":0.000019728122,"threshold_uncertainty_score":0.62406904},"labels":[],"label_agreement":null},{"id":"W4236005315","doi":"10.1007/978-1-4939-7237-1_17","title":"Epidemiological Methods","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Influenza Virus Research Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Epidemiology; Medicine; Risk analysis (engineering); Computer science; Pathology","score_opus":0.30069608961928423,"score_gpt":0.6378215597434834,"score_spread":0.3371254701241992,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236005315","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00797847,0.0028626218,0.96407604,0.0030471655,0.0002516802,0.00040118172,0.000003007044,0.000045195844,0.021334618],"genre_scores_gemma":[0.0021957222,0.0002908056,0.9947396,0.0023018671,0.000079416925,0.00009837944,0.0000039029924,0.000018470793,0.00027187075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99381226,0.0045250882,0.0004233891,0.00052826904,0.00008876738,0.0006222275],"domain_scores_gemma":[0.99711674,0.0013417016,0.00014932078,0.0011534856,0.00010462129,0.00013410316],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.009542818,0.0002099814,0.0008544884,0.0001794515,0.0002074741,0.00001724131,0.0004511259,0.00034491642,0.0001271347],"category_scores_gemma":[0.04623151,0.00014851845,0.00019723778,0.00009660254,0.00089825183,0.000028531771,0.00063911825,0.00062983285,0.00003293228],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013812075,0.000057284196,0.048932765,0.000026152893,0.000102546815,0.00017083442,0.000038797192,0.0000026867401,0.65725464,0.012986588,0.00009070721,0.2801989],"study_design_scores_gemma":[0.0034498863,0.0011756709,0.2015814,0.000095781936,0.000101452184,0.00012856079,0.00007135552,0.0011134688,0.45373565,0.13675296,0.20120418,0.0005896105],"about_ca_topic_score_codex":0.0001035444,"about_ca_topic_score_gemma":0.0000039791403,"teacher_disagreement_score":0.2796093,"about_ca_system_score_codex":0.000075641154,"about_ca_system_score_gemma":0.00006355247,"threshold_uncertainty_score":0.9618025},"labels":[],"label_agreement":null},{"id":"W4236026989","doi":"10.1007/978-1-59745-281-6_17","title":"Microsomal Proteomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Proteome; Proteomics; Golgi apparatus; Organelle; Secretion; Cell biology; Biology; Biochemistry; Microsome; Compartment (ship); Secretory protein; Chemistry; Computational biology; Endoplasmic reticulum; Enzyme","score_opus":0.01640646898815839,"score_gpt":0.4079524777140733,"score_spread":0.3915460087259149,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236026989","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.031407088,0.00015172578,0.9611499,0.0003828327,0.000011967336,0.00014310205,0.0000055692863,0.00008789288,0.0066599706],"genre_scores_gemma":[0.0092358375,0.000026374471,0.9900135,0.00044159673,0.000025302785,0.00011398525,0.00001548583,0.000011656575,0.000116277115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991947,0.0000663033,0.0002076511,0.00028176088,0.000022658945,0.00022694288],"domain_scores_gemma":[0.99950844,0.000033992943,0.00006341742,0.00034204696,0.000018905932,0.00003321919],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022182861,0.000113896895,0.00016262809,0.0000450382,0.000030657226,0.000006848487,0.00023083978,0.00019959456,0.00005681804],"category_scores_gemma":[0.00008558207,0.00011451739,0.00005528948,0.00011672601,0.000058406433,0.00001306294,0.00004620492,0.00024039576,0.000003652345],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007823595,0.0000310424,0.0002053408,0.0000034373509,0.0000022824918,0.0000039025226,0.000009235683,0.000008591047,0.93595135,0.032948148,0.0000044671465,0.0308244],"study_design_scores_gemma":[0.000122045465,0.000020493755,0.000017353423,0.000005295633,0.000002154798,0.0000092591645,0.000003488645,0.00009780322,0.79141307,0.20303763,0.0051658647,0.000105530205],"about_ca_topic_score_codex":0.0000053465037,"about_ca_topic_score_gemma":4.835037e-7,"teacher_disagreement_score":0.1700895,"about_ca_system_score_codex":0.000038628383,"about_ca_system_score_gemma":0.000016640914,"threshold_uncertainty_score":0.46698835},"labels":[],"label_agreement":null},{"id":"W4236476906","doi":"10.1007/978-1-0716-1095-4_17","title":"Eosinophil Shape Change and Secretion","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Asthma and respiratory diseases","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Eosinophil peroxidase; CCL11; Eosinophil; Degranulation; Chemotaxis; Secretion; Eotaxin; Eosinophil cationic protein; Immunology; Cell biology; Stimulation; Chemistry; Biology; Neuroscience; Biochemistry; Asthma; Receptor","score_opus":0.05234091462125309,"score_gpt":0.41098633029722037,"score_spread":0.3586454156759673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236476906","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7695813,0.019521603,0.2076124,0.0017282984,0.00020787827,0.00023957578,0.0000046507994,0.00003467303,0.0010695793],"genre_scores_gemma":[0.21739116,0.0005222866,0.7710915,0.01038682,0.0002492196,0.00008527658,0.000084060724,0.00003251336,0.0001571318],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989231,0.0005491729,0.000119375385,0.00023273156,0.00003511109,0.00014048984],"domain_scores_gemma":[0.99968636,0.000049549166,0.000023887318,0.00012922616,0.00003783531,0.000073165094],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00024615836,0.000079762576,0.00019812059,0.000073185474,0.000018892986,0.0000036724464,0.000022798524,0.00012955592,0.0001174926],"category_scores_gemma":[0.000273888,0.000067858666,0.00004456254,0.00014380208,0.00008509729,0.0000110551255,0.000054833854,0.00010435797,0.0000032764326],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027123626,0.0000566848,0.023313737,0.00003696612,0.000011991659,0.0003784382,0.000041945645,1.346502e-7,0.72329867,0.0005716305,0.0000054787356,0.2522572],"study_design_scores_gemma":[0.003867888,0.0012347648,0.3572005,0.00023890859,0.00021274887,0.00072897895,0.00037075416,0.0025551047,0.5059165,0.01054128,0.11651284,0.0006197142],"about_ca_topic_score_codex":0.000005541143,"about_ca_topic_score_gemma":0.0000017289996,"teacher_disagreement_score":0.5634791,"about_ca_system_score_codex":0.000012770248,"about_ca_system_score_gemma":0.000040041312,"threshold_uncertainty_score":0.2767196},"labels":[],"label_agreement":null},{"id":"W4236487271","doi":"10.1007/978-1-60327-299-5_21","title":"Immunoassays for Collagenase-Mediated Cleavage of Type I and II Collagens","year":2010,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; St. Lawrence College","funders":"Canadian Institutes of Health Research","keywords":"Collagenase; Cleavage (geology); Chemistry; Antibody; Type I collagen; Molecular biology; Biochemistry; Immunology; Biology; Medicine; Pathology; Enzyme","score_opus":0.01749183282555065,"score_gpt":0.335113900499087,"score_spread":0.31762206767353635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236487271","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017246751,0.040057946,0.7999527,0.00030174287,0.0037918459,0.006575819,0.0019715119,0.00008366264,0.13001801],"genre_scores_gemma":[0.004809347,0.002030444,0.9557923,0.0007606981,0.00035521376,0.00017400624,0.0019044299,0.0002513212,0.03392224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981776,0.00021143006,0.0005256579,0.00067547295,0.00007368189,0.00033618137],"domain_scores_gemma":[0.9986603,0.00009383595,0.0003117556,0.0006143374,0.00023183772,0.000087906796],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0010050477,0.00039572158,0.0006489177,0.00017723013,0.00007597391,0.00000697888,0.00028023863,0.001451478,0.00003598166],"category_scores_gemma":[0.0007275797,0.00039893074,0.00017002113,0.00006567837,0.00029814377,0.0000015761974,0.0003819162,0.0003107769,0.0000023532245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020269105,0.000026831118,0.000003702527,0.000057727204,0.0001235557,0.000010390971,0.000014531259,4.5665544e-7,0.98559237,0.012049352,0.00031265235,0.0016057224],"study_design_scores_gemma":[0.0006358379,0.0013000718,8.403049e-7,0.000034170997,0.000055584584,0.000016480317,0.0000047687495,0.000008080303,0.81161964,0.021498479,0.16449375,0.0003323107],"about_ca_topic_score_codex":0.000009250495,"about_ca_topic_score_gemma":0.000017846947,"teacher_disagreement_score":0.17397277,"about_ca_system_score_codex":0.000016179969,"about_ca_system_score_gemma":0.00019630288,"threshold_uncertainty_score":0.9998463},"labels":[],"label_agreement":null},{"id":"W4236632707","doi":"10.1007/978-1-60761-646-7_5","title":"In Situ Analysis of DNA Methylation in Plants","year":2010,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"DNA methylation; Epigenetics; Chromatin; Epigenomics; Biology; Methylation; Histone; DNA; Epigenetics of physical exercise; Molecular biology; Computational biology; Genetics; Gene; Gene expression","score_opus":0.04595578119723786,"score_gpt":0.37745888891573715,"score_spread":0.3315031077184993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236632707","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90681684,0.0029662063,0.007344888,0.00085999136,0.00046632867,0.0014262788,0.0005864736,0.000040347404,0.07949263],"genre_scores_gemma":[0.48820612,0.0040628896,0.46385026,0.002435553,0.00043978295,0.00037377654,0.013200679,0.00005786704,0.027373055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99655765,0.001324585,0.0007593989,0.0007518532,0.0001526872,0.0004538417],"domain_scores_gemma":[0.99839264,0.0010150966,0.00028205788,0.00019768205,0.00004988153,0.000062612206],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0027456325,0.00032179052,0.0011521761,0.0007786682,0.000019440593,0.0000073501574,0.0005752136,0.0016511759,0.00037073245],"category_scores_gemma":[0.00039583,0.0001625321,0.0002769649,0.0006381032,0.00025471402,0.000022617123,0.00024348315,0.0010671496,0.000008719374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055153443,0.00003746092,0.0032829538,0.00000569003,0.00014429941,0.00013610274,0.00002321377,0.000009822542,0.9717795,0.003791293,0.000001959426,0.020732552],"study_design_scores_gemma":[0.00080585206,0.0006410891,0.072080985,0.00013410879,0.00029514733,0.000028966537,0.000032537493,0.00026417407,0.7808007,0.11739395,0.02616971,0.0013527777],"about_ca_topic_score_codex":0.00038792548,"about_ca_topic_score_gemma":0.014307707,"teacher_disagreement_score":0.4565054,"about_ca_system_score_codex":0.000059631246,"about_ca_system_score_gemma":0.000027770764,"threshold_uncertainty_score":0.9996449},"labels":[],"label_agreement":null},{"id":"W4236723689","doi":"10.1007/978-1-4939-7828-1_12","title":"Psychoneuroimmunology and Natural Killer Cells: The Chromium-Release Whole-Blood Assay","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute of Allergy and Infectious Diseases","keywords":"Effector; Lymphokine-activated killer cell; K562 cells; Flow cytometry; Biology; Lymphocyte; Innate immune system; Natural killer cell; Immunology; Cell biology; Cytotoxic T cell; Cell; Cytotoxicity; Interleukin 21; Immune system; In vitro; CD8; Biochemistry","score_opus":0.012656976460235836,"score_gpt":0.32810779665344375,"score_spread":0.3154508201932079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236723689","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29634333,0.03599505,0.56508267,0.004643254,0.08941853,0.0016574733,0.000006908395,0.00025637652,0.0065964116],"genre_scores_gemma":[0.86546963,0.0006994631,0.09167355,0.009508806,0.00032125966,0.00031497487,0.00019699367,0.00012637998,0.031688936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99462765,0.003998024,0.00038775752,0.00051181176,0.000019717676,0.000455047],"domain_scores_gemma":[0.9987778,0.0004690146,0.00014161391,0.0005066322,0.00008789499,0.00001701699],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012277812,0.00025132077,0.00033317797,0.0002008552,0.0002155252,0.000017084369,0.00031497274,0.0004331659,0.0006519984],"category_scores_gemma":[0.00043336255,0.00017942124,0.000102592174,0.00023117122,0.0010283999,0.000047503996,0.00018742908,0.0008281086,0.00037942227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020349355,0.00008359149,0.00015886837,0.000004245452,0.00013883796,0.0000064274413,0.00016625311,7.394255e-7,0.98521924,0.0009184856,0.0016613314,0.011438464],"study_design_scores_gemma":[0.001322868,0.00044343417,0.0009780726,0.000011403283,0.0000465738,0.0003031259,0.00012261429,0.000027084185,0.67961013,0.0005593971,0.31637552,0.0001997911],"about_ca_topic_score_codex":0.00009136542,"about_ca_topic_score_gemma":0.000013649706,"teacher_disagreement_score":0.5691263,"about_ca_system_score_codex":0.000023384388,"about_ca_system_score_gemma":0.000027640132,"threshold_uncertainty_score":0.7316586},"labels":[],"label_agreement":null},{"id":"W4236844750","doi":"10.1007/978-1-61779-139-0","title":"Immune Receptors","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; University of Toronto; Health Sciences Centre","funders":"School of Medicine, Stanford University; Universität zu Köln; Hospital for Sick Children; Rheinische Friedrich-Wilhelms-Universität Bonn; University of Toronto; University of Cape Town; University of South Florida; University of Aberdeen; Children’s Hospital of Wisconsin Research Institute; Sunnybrook Research Institute; Moffitt Cancer Center","keywords":"Innate immune system; Realm; Receptor; Immunity; Immune system; Biology; Immunology; Political science","score_opus":0.02329827719154952,"score_gpt":0.3333622307037532,"score_spread":0.31006395351220367,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236844750","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022132032,0.020665342,0.22559635,0.000053291395,0.02330629,0.00043324966,0.0000073649135,0.00012891724,0.72978705],"genre_scores_gemma":[0.00001556074,0.0005089721,0.057201173,0.00039935732,0.0000502355,0.00006297627,0.00093908876,0.00008197248,0.94074064],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959351,0.0021102394,0.0007736931,0.0006650138,0.000019493684,0.0004964954],"domain_scores_gemma":[0.9985877,0.00024838367,0.0003797598,0.00068036607,0.00008457791,0.000019205976],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0011212932,0.0004652771,0.00085038575,0.00056881143,0.00006867262,0.000007259111,0.00044939536,0.0021209244,0.010903395],"category_scores_gemma":[0.00030528405,0.00044616972,0.00035992207,0.000114801674,0.00035352286,0.000031909447,0.00021577493,0.001608836,0.0022666885],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001468479,0.00006744455,0.000013559938,0.000022614713,0.00028234348,0.000011833881,0.00012027925,4.7447557e-7,0.9250693,0.016065713,0.017799186,0.04040043],"study_design_scores_gemma":[0.00044178485,0.000207465,0.000009451971,0.000052578922,0.000046140434,0.000049916205,0.000015227041,4.2889812e-7,0.26457158,0.007942924,0.7263365,0.00032605074],"about_ca_topic_score_codex":0.00008587983,"about_ca_topic_score_gemma":0.0000053039075,"teacher_disagreement_score":0.7085373,"about_ca_system_score_codex":0.00021514382,"about_ca_system_score_gemma":0.00017177028,"threshold_uncertainty_score":0.999799},"labels":[],"label_agreement":null},{"id":"W4236859742","doi":"10.1007/978-1-4939-9593-6_2","title":"Bioinformatics for Analysis of Poxvirus Genomes","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Genome; GenBank; Genomics; Software; Computational biology; DNA sequencing; Biology; Computer science; Genetics; DNA; Gene","score_opus":0.06760922779883563,"score_gpt":0.41568680244715106,"score_spread":0.34807757464831546,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236859742","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91798794,0.0013834288,0.0778711,0.00024650394,0.00009949216,0.00060594024,0.0006394666,0.000020891799,0.0011452428],"genre_scores_gemma":[0.059442792,0.00039418944,0.9392375,0.0003551249,0.000022775435,0.00007135674,0.00032082424,0.0000013451883,0.00015410082],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989769,0.0002883618,0.0002606178,0.00016514983,0.00006181292,0.00024716437],"domain_scores_gemma":[0.99880344,0.0009613322,0.000087817556,0.000068256275,0.000052075568,0.000027107693],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010170304,0.00008535344,0.00038926688,0.00009769195,0.000023545519,0.0000057075877,0.00023690957,0.00009133525,0.00009672232],"category_scores_gemma":[0.00028808342,0.000032605498,0.00016673551,0.0008297465,0.00006699236,0.000018274803,0.000109513014,0.00006147744,0.00000500618],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020281173,0.000017496557,0.009257218,0.000009312133,0.00021352466,4.4408776e-7,0.000033611323,0.000041731684,0.92934144,0.00090189325,0.0000093913195,0.060153678],"study_design_scores_gemma":[0.000799116,0.0016707953,0.083385825,0.000022334683,0.0004446625,0.000002607899,0.0007693679,0.029269068,0.79375434,0.012312331,0.07683063,0.0007389433],"about_ca_topic_score_codex":0.00008173918,"about_ca_topic_score_gemma":0.00010214583,"teacher_disagreement_score":0.8613664,"about_ca_system_score_codex":0.000013269201,"about_ca_system_score_gemma":0.000005640555,"threshold_uncertainty_score":0.13296136},"labels":[],"label_agreement":null},{"id":"W4236872823","doi":"10.1007/978-1-60327-565-1","title":"Bacteriophages","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Computer science","score_opus":0.01373914333118821,"score_gpt":0.358796383308268,"score_spread":0.3450572399770798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4236872823","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019194346,0.00040288715,0.16155405,0.00017181417,0.0004500864,0.00028133817,0.000016678925,0.000045275785,0.8368859],"genre_scores_gemma":[0.000017417806,0.00010447316,0.5618935,0.0012109366,0.00006243992,0.000016454282,0.00008515046,0.000036772668,0.43657285],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99818987,0.0004900161,0.00035449487,0.00056470674,0.000049366223,0.00035155212],"domain_scores_gemma":[0.99925405,0.00009039209,0.0001513236,0.00043304486,0.0000056100985,0.000065576816],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004293701,0.00030485276,0.00044051767,0.00010840521,0.000036963163,0.00002020302,0.00038154697,0.00057219784,0.006046949],"category_scores_gemma":[0.00006446247,0.00029584937,0.00017700432,0.00009613238,0.00021139586,0.00003798084,0.00027243549,0.0005755148,0.00054604956],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006433392,0.000028343065,0.0000135765995,0.0000047588424,0.000014346305,0.00006379894,0.000026166443,0.000007278913,0.89394844,0.00045909054,0.004858715,0.10056905],"study_design_scores_gemma":[0.00014950681,0.00011588261,0.0011681449,0.000035249355,0.000026037289,0.000047788068,0.000001683702,0.0000067821684,0.020328872,0.01961555,0.95813245,0.00037204992],"about_ca_topic_score_codex":0.00007639682,"about_ca_topic_score_gemma":0.000056179237,"teacher_disagreement_score":0.9532737,"about_ca_system_score_codex":0.0003351963,"about_ca_system_score_gemma":0.00002973124,"threshold_uncertainty_score":0.99994934},"labels":[],"label_agreement":null},{"id":"W4237318544","doi":"10.1007/978-1-4939-9182-2_6","title":"The Murine Limb Bud in Culture as an In Vitro Teratogenicity Test System","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Limb bud; Limb development; Endochondral ossification; In vivo; Biology; Cell biology; Context (archaeology); Zone of polarizing activity; Organ culture; In vitro; Apical ectodermal ridge; Anatomy; Cartilage; Embryogenesis; Embryo; Genetics; Ectoderm","score_opus":0.005917085257191201,"score_gpt":0.32945274615290565,"score_spread":0.32353566089571445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237318544","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.986529,0.0039146375,0.005728588,0.00016048769,0.00037385442,0.0004540967,0.000009479391,0.000013665832,0.002816193],"genre_scores_gemma":[0.97215134,0.0005131871,0.026247466,0.0004434461,0.00007400633,0.00008089883,0.00008056142,0.000029582136,0.00037951718],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974482,0.0011310689,0.0003791543,0.0005511291,0.000065615815,0.00042482273],"domain_scores_gemma":[0.9992466,0.000068806236,0.00009040483,0.0004950546,0.000036910897,0.0000622253],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010590032,0.0002160133,0.00029597993,0.00009548606,0.000037040114,0.000018617751,0.00040699422,0.00051660574,0.000004293422],"category_scores_gemma":[0.00018001236,0.00014653603,0.00010009567,0.000290275,0.000110084155,0.0000032941725,0.00015290454,0.00039495144,0.000011085717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022741851,0.000056628967,0.0057573444,0.000021205642,0.000022478174,0.00003837141,0.000048172413,0.00017391704,0.98866534,0.0004957042,0.0000077797595,0.004485616],"study_design_scores_gemma":[0.0009919673,0.0005543183,0.00067312695,0.000033905864,0.000006658058,0.00006260621,0.00020233948,0.0003570754,0.98691523,0.00042538194,0.009537632,0.00023975321],"about_ca_topic_score_codex":0.00021247477,"about_ca_topic_score_gemma":0.00012549922,"teacher_disagreement_score":0.020518878,"about_ca_system_score_codex":0.000073324765,"about_ca_system_score_gemma":0.00007936644,"threshold_uncertainty_score":0.5975566},"labels":[],"label_agreement":null},{"id":"W4237332367","doi":"10.1007/978-1-4939-9182-2_24","title":"Regulation and Control of AP-1 Binding Activity in Embryotoxicity","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Nucleic acid; Electrophoretic mobility shift assay; Agarose; DNA; Chemistry; Electrophoresis; Computational biology; Biochemistry; Biology; Molecular biology; Transcription factor; Gene","score_opus":0.01145376299963057,"score_gpt":0.33665868325016735,"score_spread":0.32520492025053677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237332367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6310428,0.000147154,0.36828375,0.00002137594,0.00007135063,0.00022862964,0.000004353889,0.0000037970972,0.00019678603],"genre_scores_gemma":[0.851676,0.000017620392,0.14814267,0.00006215045,0.000009885658,0.000017637129,0.000010543701,0.000012896705,0.000050630104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99811435,0.000985599,0.00023348186,0.00040161054,0.000048126465,0.00021684752],"domain_scores_gemma":[0.99944824,0.00006620083,0.0001160868,0.00031214274,0.000026586376,0.00003074507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013103087,0.0001309503,0.00029615324,0.0001508441,0.000009505504,0.0000036351892,0.000119878474,0.000301574,0.000012585861],"category_scores_gemma":[0.00027066946,0.00013357737,0.0000568065,0.00014401176,0.000072465584,0.0000031301088,0.00010986402,0.0001184968,0.0000013963114],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010859224,0.000036915113,0.0275473,0.000021802181,0.000016853954,0.0000017605335,0.000015706648,0.00006441619,0.96556985,0.00091448496,5.536658e-7,0.005701739],"study_design_scores_gemma":[0.0010240999,0.0002576762,0.011719257,0.000013272595,0.000005676206,0.000005434281,0.000013763828,0.001132868,0.98363286,0.0019469097,0.000117191725,0.00013096917],"about_ca_topic_score_codex":0.00003335276,"about_ca_topic_score_gemma":0.000017022967,"teacher_disagreement_score":0.22063318,"about_ca_system_score_codex":0.00001903487,"about_ca_system_score_gemma":0.00002916781,"threshold_uncertainty_score":0.54471266},"labels":[],"label_agreement":null},{"id":"W4237402185","doi":"10.1007/978-1-59745-551-0","title":"Biological Microarrays","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BioPhage Pharma (Canada)","funders":"","keywords":"DNA microarray; Computational biology; Microarray; Biology; Genetics; Gene; Gene expression","score_opus":0.030161255509228057,"score_gpt":0.3911568156639795,"score_spread":0.3609955601547514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237402185","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00093690027,0.006307061,0.7847647,0.00025845965,0.0016291244,0.0006124947,0.00005204594,0.000043705382,0.2053955],"genre_scores_gemma":[0.0002803299,0.0012868181,0.74951655,0.0019513826,0.0007842633,0.00024363448,0.0018479776,0.00014239248,0.24394663],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99701005,0.0008382145,0.000507329,0.0011189985,0.000083670304,0.00044171515],"domain_scores_gemma":[0.99847066,0.00004831168,0.00025984895,0.0010160403,0.000089253626,0.0001158967],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00095945934,0.0004512172,0.00051694503,0.0002554506,0.0000470775,0.000017427066,0.0006666602,0.0026646783,0.00017950367],"category_scores_gemma":[0.00036491387,0.00040584573,0.0002744944,0.00011173358,0.00035679858,9.95941e-7,0.00033953067,0.0008952101,0.00003177828],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004331725,0.000034286317,0.00009709769,0.000012841604,0.000036212776,0.000008003221,0.000008721748,0.0000020226387,0.96918243,0.003205327,0.0069687082,0.020401014],"study_design_scores_gemma":[0.00027437846,0.00015277187,0.00003659887,0.000016271939,0.000011140468,0.00001642099,0.0000044677145,0.0000028519964,0.33352566,0.010552115,0.65505886,0.00034847375],"about_ca_topic_score_codex":0.0000041299136,"about_ca_topic_score_gemma":0.000012162285,"teacher_disagreement_score":0.6480901,"about_ca_system_score_codex":0.000050729173,"about_ca_system_score_gemma":0.00036513904,"threshold_uncertainty_score":0.99983937},"labels":[],"label_agreement":null},{"id":"W4237600044","doi":"10.1007/978-1-62703-730-3","title":"Therapeutic Applications of Ribozymes and Riboswitches","year":2013,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Ribozyme; Riboswitch; Computational biology; Biology; Computer science; Genetics; RNA; Non-coding RNA; Gene","score_opus":0.017886792213339952,"score_gpt":0.3450976453897943,"score_spread":0.3272108531764544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237600044","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000272854,0.026717506,0.94493663,0.00006997347,0.00009104496,0.00088114745,0.000033830816,0.000010620167,0.026986415],"genre_scores_gemma":[0.0009789874,0.0029091176,0.90337753,0.00049127283,0.00019513645,0.00088777184,0.000323327,0.00013036173,0.09070648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980168,0.00062672433,0.000428287,0.00060149835,0.00006720714,0.0002595119],"domain_scores_gemma":[0.99884236,0.000110388726,0.000265958,0.00064646144,0.00007579131,0.000059020316],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007266979,0.0003226031,0.00053928973,0.00016474756,0.000029026354,0.000009669262,0.00035285758,0.0009524924,0.000056563338],"category_scores_gemma":[0.00009637718,0.00029757933,0.00014442248,0.000066237844,0.0002919249,0.0000013386414,0.00021919655,0.0001979263,0.0000060481243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013151558,0.000020608288,0.000045635363,0.0000672526,0.000102908685,9.934058e-7,0.000012533323,8.691891e-7,0.88051796,0.015500445,0.00011296523,0.103604704],"study_design_scores_gemma":[0.00019050427,0.00021157032,0.000017422122,0.00003365259,0.0000501775,0.000011267614,0.000010735187,0.0000044368535,0.67695993,0.12849045,0.19371778,0.0003020684],"about_ca_topic_score_codex":0.000015494226,"about_ca_topic_score_gemma":0.0000047999824,"teacher_disagreement_score":0.203558,"about_ca_system_score_codex":0.000015911599,"about_ca_system_score_gemma":0.0001385446,"threshold_uncertainty_score":0.9999476},"labels":[],"label_agreement":null},{"id":"W4237658881","doi":"10.1007/978-1-59745-477-3","title":"Plant Hormones","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Hormone; Action (physics); Biology; Physics; Endocrinology","score_opus":0.023379016158591583,"score_gpt":0.351233715527354,"score_spread":0.32785469936876244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4237658881","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00363352,0.059522297,0.5404338,0.0003349723,0.0032325557,0.002012887,0.0011135115,0.00014092238,0.38957554],"genre_scores_gemma":[0.00011651764,0.0074351775,0.67958176,0.0012720269,0.0014621001,0.00022750956,0.009293459,0.00026282034,0.30034864],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9954901,0.0013513825,0.0006478311,0.001698083,0.00010836254,0.00070427166],"domain_scores_gemma":[0.9981113,0.000105059706,0.00032458175,0.0012461374,0.00009876684,0.00011414041],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009934292,0.0006843871,0.0009412743,0.0003524318,0.0000574266,0.000008121802,0.0007547113,0.0020988667,0.000024006142],"category_scores_gemma":[0.00067338016,0.00065787736,0.0003158878,0.00010939814,0.0006042291,0.0000015748022,0.0005549778,0.0006941538,0.00004141207],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015153235,0.000051760995,0.0002543757,0.000027588367,0.0002028966,0.0002320996,0.000016141135,0.000008230139,0.9753454,0.004176106,0.013901636,0.005632269],"study_design_scores_gemma":[0.0004149248,0.0004826538,0.000088468565,0.000026629414,0.00003324906,0.00063214864,0.0000032547237,0.0000048759243,0.19237244,0.0061847703,0.7990318,0.0007248167],"about_ca_topic_score_codex":0.00001775333,"about_ca_topic_score_gemma":0.000025026942,"teacher_disagreement_score":0.78513014,"about_ca_system_score_codex":0.000103071005,"about_ca_system_score_gemma":0.00052698655,"threshold_uncertainty_score":0.99958724},"labels":[],"label_agreement":null},{"id":"W4238255377","doi":"10.1007/978-1-62703-339-8_11","title":"Thrombin Generation","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Thrombosis and Atherosclerosis Research Institute","funders":"Hamilton Health Sciences Foundation; McMaster University","keywords":"Thrombin; Thrombin generation; Coagulation; In vivo; Medicine; Ex vivo; Internal medicine; Biology; Platelet; Biotechnology","score_opus":0.058772312500071436,"score_gpt":0.4188154731533166,"score_spread":0.36004316065324515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238255377","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1530572,0.0001688679,0.8426032,0.0010865843,0.00022485251,0.00030364178,2.909024e-7,0.00003341979,0.0025219552],"genre_scores_gemma":[0.21312311,0.000011312413,0.7844968,0.002101513,0.000042600957,0.000058879767,0.000021173524,0.000011593981,0.0001330073],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890023,0.00047634897,0.00019760638,0.00021539493,0.000046531288,0.00016385887],"domain_scores_gemma":[0.99960405,0.000032533047,0.000036835427,0.00022507692,0.000048771944,0.000052740997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043119097,0.00008845395,0.00022137017,0.000114550465,0.000018758907,0.0000076449105,0.00005064058,0.00015698977,0.00066852727],"category_scores_gemma":[0.00014755299,0.00007595005,0.0000525001,0.0001617565,0.000038337934,0.00002144695,0.000030502983,0.000119196215,0.00008094592],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000018026923,0.00004767914,0.0013195032,0.00000382887,0.000015863394,0.0000029790285,0.000025969106,0.0000024391993,0.95170885,0.028589541,0.00007819785,0.018203355],"study_design_scores_gemma":[0.00069925224,0.00018913407,0.0060744677,0.0000075708795,0.0000203735,0.0000272476,0.000018941562,0.0036005653,0.9537442,0.034669764,0.00084741146,0.00010110711],"about_ca_topic_score_codex":0.00004875623,"about_ca_topic_score_gemma":0.0000028240433,"teacher_disagreement_score":0.060065903,"about_ca_system_score_codex":0.000021920165,"about_ca_system_score_gemma":0.000022335786,"threshold_uncertainty_score":0.7319905},"labels":[],"label_agreement":null},{"id":"W4238931308","doi":"10.1007/978-1-4939-8559-3","title":"Progranulin","year":2018,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Amyotrophic Lateral Sclerosis Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Psychology","score_opus":0.05553250845312428,"score_gpt":0.4790515135218228,"score_spread":0.4235190050686985,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4238931308","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000343234,0.0035316667,0.45248097,0.0012187485,0.0005553745,0.0021216348,0.000019402525,0.00013300209,0.53959596],"genre_scores_gemma":[0.000010176918,0.00015102977,0.68985265,0.00067189866,0.00031084268,0.00009678793,0.00016195976,0.00007724607,0.3086674],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967235,0.0012550646,0.00048737682,0.00073430076,0.00020252887,0.0005972506],"domain_scores_gemma":[0.99861354,0.0001922445,0.000118773096,0.0007553322,0.00015376057,0.00016633685],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0018191182,0.00033957305,0.00091744034,0.000402239,0.000025902356,0.000010785106,0.00031829753,0.001236622,0.0010195929],"category_scores_gemma":[0.0006848854,0.00027134208,0.00024483452,0.0001924706,0.00061843987,0.000009330952,0.00028750164,0.001093015,0.00024373776],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005741438,0.00026762704,0.0009969966,0.00056059007,0.0005609653,0.001335508,0.000124032,7.0915223e-7,0.6293301,0.012526676,0.021636808,0.33208582],"study_design_scores_gemma":[0.0015634741,0.0016797131,0.0006482532,0.0004477509,0.000115714596,0.0001185599,0.000002088072,0.00007264758,0.009858946,0.07295689,0.91203433,0.0005016328],"about_ca_topic_score_codex":0.000019614417,"about_ca_topic_score_gemma":0.000004421401,"teacher_disagreement_score":0.89039755,"about_ca_system_score_codex":0.0003382467,"about_ca_system_score_gemma":0.00050254783,"threshold_uncertainty_score":0.9999739},"labels":[],"label_agreement":null},{"id":"W4239034077","doi":"10.1007/978-1-4939-2428-8_1","title":"On Framing the Research Question and Choosing the Appropriate Research Design","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Foothills Medical Centre; University of Calgary; Memorial University of Newfoundland","funders":"","keywords":"Framing (construction); Randomized controlled trial; Clinical study design; Psychological intervention; Internal validity; Research design; Medicine; Epidemiology; Relevance (law); Psychology; Clinical trial; Management science; Medical physics; Computer science; Statistics; Surgery; Mathematics; Pathology; Political science; Nursing; Engineering","score_opus":0.939781023769368,"score_gpt":0.7357332921623643,"score_spread":0.20404773160700374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239034077","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.016679447,0.0029959744,0.9728624,0.0035572052,0.00016145759,0.00091567094,4.331471e-7,0.000002471828,0.0028249226],"genre_scores_gemma":[0.098257646,0.00004930651,0.9001345,0.00040458242,0.00007636254,0.00017770691,9.44567e-7,0.000014725983,0.0008842421],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.5566199,0.4364172,0.0025137293,0.00096882763,0.0029700499,0.00051033456],"domain_scores_gemma":[0.9274311,0.06631735,0.0006848091,0.0036892046,0.0017457329,0.00013181093],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.7718373,0.00014606048,0.0009704162,0.0006113712,0.0003524505,0.00053636305,0.0018284579,0.0001642648,0.00008965991],"category_scores_gemma":[0.3206235,0.000049823742,0.00019854898,0.0024789202,0.00058545236,0.000037728776,0.00044800888,0.0009545287,0.00019706924],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000075834265,0.0000686871,0.0022463135,0.000019197509,0.000120498626,0.00002462579,0.004176357,0.0013260458,0.06388725,0.32427275,0.0059311464,0.5978513],"study_design_scores_gemma":[0.00013348226,0.00017375656,0.00051577657,0.000028048267,0.000015672946,0.000011610116,0.0015986154,0.023813259,0.0027454002,0.950843,0.020036358,0.00008503741],"about_ca_topic_score_codex":0.00008295591,"about_ca_topic_score_gemma":0.000009895583,"teacher_disagreement_score":0.6265702,"about_ca_system_score_codex":0.000057974077,"about_ca_system_score_gemma":0.000104569364,"threshold_uncertainty_score":0.6850992},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"gpt","categories":["metaresearch"],"domain":"methods","study_design":"theoretical_or_conceptual","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W4239119308","doi":"10.1007/978-1-61779-219-9_12","title":"MR Oximetry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced MRI Techniques and Applications","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Biomedical Imaging and Bioengineering; Canadian Institutes of Health Research","keywords":"Oxygenation; Retinal; Medicine; Ophthalmology; Anesthesia","score_opus":0.06695440961394611,"score_gpt":0.4871439559694293,"score_spread":0.42018954635548317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239119308","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032010707,0.0002837347,0.97840494,0.00013822904,0.000030533574,0.00019504354,0.0000011097897,0.00006676376,0.017678563],"genre_scores_gemma":[0.010655372,0.00003238945,0.988284,0.0008125555,0.00001367421,0.00007153228,0.0000061970577,0.000012514926,0.00011179535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993536,0.00012686121,0.00014956029,0.00019510923,0.000021370211,0.00015350236],"domain_scores_gemma":[0.99956983,0.000034474084,0.00003273559,0.0002973664,0.000021942731,0.0000436715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003093627,0.00007334317,0.0001724254,0.000097810116,0.000012840984,7.172926e-7,0.00007748663,0.00012217803,0.00011979207],"category_scores_gemma":[0.00011835943,0.00006284298,0.000049892526,0.00020074296,0.000079285695,0.0000071942172,0.00004654913,0.00015209217,0.000009409766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016860477,0.00007449171,0.002551918,0.000004479288,0.0000051196416,0.000021832142,0.00003473204,4.0419644e-7,0.8564247,0.061890624,0.000017423281,0.07895745],"study_design_scores_gemma":[0.00025202357,0.00016177894,0.0013901817,0.000007761679,0.000015973712,0.00004198043,0.000020471842,0.000082790495,0.873616,0.10967136,0.014648763,0.000090955196],"about_ca_topic_score_codex":0.00002126028,"about_ca_topic_score_gemma":7.396599e-7,"teacher_disagreement_score":0.0788665,"about_ca_system_score_codex":0.000018328734,"about_ca_system_score_gemma":0.000011554432,"threshold_uncertainty_score":0.25626624},"labels":[],"label_agreement":null},{"id":"W4239340622","doi":"10.1007/978-1-0716-1138-8_7","title":"Longitudinal Studies 2: Modeling Data Using Multivariate Analysis","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Statistical Methods and Bayesian Inference","field":"Mathematics","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; University of Calgary","funders":"","keywords":"Statistics; Multivariate statistics; Econometrics; Confidence interval; Component (thermodynamics); Point estimation; Statistical model; Longitudinal data; Mathematics; Computer science; Data mining","score_opus":0.4345708543469886,"score_gpt":0.5626842146774412,"score_spread":0.12811336033045262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239340622","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010282703,0.007537395,0.98549217,0.000029651359,0.00029021964,0.00020274564,0.00021978198,0.000032441956,0.0061853016],"genre_scores_gemma":[0.000018099903,0.00051423605,0.9977985,0.00006122032,0.00008270724,0.000009107902,0.00014322366,0.00007044362,0.0013024559],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99532104,0.0016724806,0.0010424028,0.0013497979,0.00017743361,0.00043682806],"domain_scores_gemma":[0.99412656,0.00333774,0.00037800454,0.0018041604,0.00027166202,0.000081857725],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0036072072,0.0005351002,0.0020802293,0.000557227,0.00007412169,0.000032138207,0.00072254444,0.00065117463,0.00024708963],"category_scores_gemma":[0.008015069,0.00048107424,0.00029975228,0.00028335385,0.00023819724,0.000039154176,0.0013884869,0.0007483119,0.0000024000421],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014032803,0.000028855307,0.000044903027,0.00018134172,0.0031290962,0.00032631622,0.000053214877,0.00018682564,0.0032513486,0.95673573,0.0000042448637,0.036044065],"study_design_scores_gemma":[0.00014837072,0.000023942357,0.0000014136923,0.00019338894,0.0024797646,0.0000135203945,0.000022998534,0.16406325,0.00018130412,0.8321493,0.00028333013,0.0004393895],"about_ca_topic_score_codex":0.000057537673,"about_ca_topic_score_gemma":0.000050906947,"teacher_disagreement_score":0.16387643,"about_ca_system_score_codex":0.000120410754,"about_ca_system_score_gemma":0.000114455564,"threshold_uncertainty_score":0.9997641},"labels":[],"label_agreement":null},{"id":"W4239478856","doi":"10.1007/978-1-0716-1138-8_11","title":"Randomized Controlled Trials 1: Design","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Blinding; Randomized controlled trial; Randomization; Confounding; Sample size determination; Gold standard (test); Clinical trial; Medicine; Clinical study design; Research design; Statistics; Surgery; Mathematics","score_opus":0.8083774361730032,"score_gpt":0.6297923473630008,"score_spread":0.17858508881000235,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239478856","genre_codex":"methods","genre_gemma":"methods","domain_codex":"methods","domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":"methods","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[7.72031e-7,0.03156529,0.72335935,0.00032169264,0.0008155177,0.004273793,0.00000983915,0.000004466257,0.23964927],"genre_scores_gemma":[0.0000036347526,0.00047273602,0.62669337,0.00055585563,0.00008855739,0.00036214097,0.000020085987,0.000032035572,0.37177157],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.18516126,0.7502785,0.057068113,0.0033858994,0.0034950706,0.00061118347],"domain_scores_gemma":[0.6553751,0.3078155,0.02802985,0.006755854,0.0018292139,0.00019446266],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","insufficient_payload"],"consensus_categories":["metaresearch","metaepi_broad","insufficient_payload"],"category_scores_codex":[0.83923405,0.00097468507,0.07637397,0.0015470147,0.000055612963,0.00043827214,0.0023159294,0.0012134566,0.045760855],"category_scores_gemma":[0.70860267,0.00040491796,0.023757448,0.00036571448,0.00032392325,0.000025469612,0.0003199832,0.0006556156,0.00085160596],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.013765728,0.00003257933,0.0000033381348,0.000038623584,0.008885002,0.00021705263,0.00007514274,0.00013290098,0.0068568657,0.8839753,0.0048462413,0.08117118],"study_design_scores_gemma":[0.09405119,0.00003527268,1.309626e-7,0.000088388995,0.003093501,0.000017791961,0.000014044061,0.0015357072,0.00041389756,0.7156515,0.18468082,0.00041777067],"about_ca_topic_score_codex":0.000003982511,"about_ca_topic_score_gemma":0.00000277684,"teacher_disagreement_score":0.47021386,"about_ca_system_score_codex":0.000052730138,"about_ca_system_score_gemma":0.00028381214,"threshold_uncertainty_score":0.9999263},"labels":[],"label_agreement":null},{"id":"W4239581873","doi":"10.1007/978-1-4939-0428-0_12","title":"Characterization of Extracellular HSV-1 Virions by Proteomics","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Extracellular; Capsid; Herpes simplex virus; Differential centrifugation; Proteomics; Chemistry; Mass spectrometry; Centrifugation; Proteome; Biology; Virus; Molecular biology; Virology; Chromatography; Biochemistry; Gene","score_opus":0.015848020407385997,"score_gpt":0.37334939562506103,"score_spread":0.35750137521767505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239581873","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39390504,0.00006007838,0.6052216,0.00008960138,0.000056386572,0.00021086707,0.0000061707897,0.000010830783,0.00043941743],"genre_scores_gemma":[0.23098935,0.000032209107,0.768262,0.00016812468,0.000020662133,0.000075865995,0.00013612874,0.000019053321,0.00029657147],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988554,0.00053464074,0.00024960842,0.00018533862,0.000035475263,0.00013950179],"domain_scores_gemma":[0.999558,0.000048407128,0.00008271207,0.00023278294,0.00003669548,0.00004145741],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005478039,0.00009335475,0.00025677498,0.00015107407,0.000025340702,0.000003213713,0.00004304587,0.00015906298,0.000053446875],"category_scores_gemma":[0.00021987029,0.0000812201,0.000059108563,0.00017591711,0.000088977526,0.00001260261,0.000022214455,0.00011273391,0.0000068170993],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016335414,0.0001669337,0.005207244,0.000013677338,0.000031171392,0.0000029639768,0.000029716144,0.0000012090006,0.93788075,0.0020462628,0.0000018675086,0.05460186],"study_design_scores_gemma":[0.0006668039,0.0002499921,0.0011277081,0.000018347355,0.000036626418,0.000011275814,0.000002691095,0.0004336629,0.95130485,0.0010671411,0.04501119,0.00006969868],"about_ca_topic_score_codex":0.000034636803,"about_ca_topic_score_gemma":0.0000016593841,"teacher_disagreement_score":0.16304041,"about_ca_system_score_codex":0.000027921174,"about_ca_system_score_gemma":0.000026876514,"threshold_uncertainty_score":0.33120596},"labels":[],"label_agreement":null},{"id":"W4239642984","doi":"10.1007/978-1-60327-429-6_9","title":"Phylogenetic Profiling","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Interactome; Phylogenetic tree; Computational biology; Genome; Biology; Similarity (geometry); Genetics; Gene; Computer science; Artificial intelligence","score_opus":0.030026922826813702,"score_gpt":0.36050124584200227,"score_spread":0.3304743230151886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239642984","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73656803,0.004982704,0.256124,0.00005444639,0.00021721584,0.00020396881,0.000006139298,0.0000052826417,0.0018382028],"genre_scores_gemma":[0.42499378,0.00052054634,0.57382053,0.0003615638,0.000088313034,0.0000574752,0.000019757454,0.00002589148,0.00011212072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99827766,0.00047005512,0.00029064063,0.00052104547,0.00005025155,0.0003903534],"domain_scores_gemma":[0.999364,0.000032242107,0.000067613306,0.00042321105,0.000052754007,0.000060178336],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046414963,0.00020651097,0.00025889775,0.00009286511,0.00007833379,0.00000401272,0.00026065027,0.00021790028,0.000008010166],"category_scores_gemma":[0.00021521475,0.00020126632,0.00010999672,0.00015387227,0.00022486743,2.5989274e-7,0.00022386634,0.00011869565,0.0000059043514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028323277,0.00003388043,0.034390673,0.0000049848945,0.00003939389,0.000015760566,0.000033312666,0.00013196802,0.9608034,0.00053785904,0.000021192587,0.003959257],"study_design_scores_gemma":[0.00048659986,0.00035057994,0.007117913,0.0000030441906,0.00000921068,0.000078036755,0.00002593258,0.000057253896,0.97885853,0.002338828,0.010386803,0.00028725603],"about_ca_topic_score_codex":0.0000142936,"about_ca_topic_score_gemma":0.000008176624,"teacher_disagreement_score":0.31769654,"about_ca_system_score_codex":0.000012070706,"about_ca_system_score_gemma":0.00006347172,"threshold_uncertainty_score":0.8207402},"labels":[],"label_agreement":null},{"id":"W4239844516","doi":"10.1007/978-1-0716-0660-5_21","title":"Isolation and Characterization of Ice-Binding Proteins from Higher Plants","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"Canadian Institutes of Health Research","keywords":"Characterization (materials science); Ice crystals; Chemistry; Biological system; Nanotechnology; Materials science; Biology; Physics; Optics","score_opus":0.035864216335111894,"score_gpt":0.31513961678520086,"score_spread":0.279275400450089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4239844516","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6912612,0.000008597628,0.30825207,0.00025705717,0.000013898972,0.000070729155,0.000014067438,0.0000057304246,0.00011668879],"genre_scores_gemma":[0.7092543,0.0000063626367,0.2903746,0.00028156748,0.000009974043,0.0000074310155,0.000058312486,0.000002162451,0.0000052855007],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99940383,0.00019267782,0.00012278059,0.00017739639,0.000028640636,0.0000746564],"domain_scores_gemma":[0.99981415,0.000056483663,0.00005216104,0.00004425879,0.0000018560099,0.000031082105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0000751594,0.000052124848,0.000103814265,0.000008843191,0.000012987431,0.0000021270898,0.0000619033,0.00007227464,0.00021242001],"category_scores_gemma":[0.000066801695,0.000040705516,0.000014440254,0.000092663024,0.00007505297,0.000022974387,0.00009034552,0.000057278645,0.000007153329],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013871212,0.000013446094,0.005501745,0.0000016411425,0.0000026127946,5.689787e-7,0.00005233692,0.000006672141,0.98827213,0.000111074994,5.850969e-7,0.006023343],"study_design_scores_gemma":[0.000114219205,0.00006494281,0.07359644,0.0000036407034,0.0000027438198,9.774416e-8,0.0000048033976,0.0012629629,0.91906846,0.0055637127,0.0002574132,0.000060559123],"about_ca_topic_score_codex":0.000042220516,"about_ca_topic_score_gemma":8.685653e-7,"teacher_disagreement_score":0.06920364,"about_ca_system_score_codex":0.000008104231,"about_ca_system_score_gemma":0.0000012963689,"threshold_uncertainty_score":0.23258503},"labels":[],"label_agreement":null},{"id":"W4240040581","doi":"10.1007/978-1-0716-1138-8_23","title":"Evidence-Based Decision Making 3: Health Technology Assessment","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; St. Joseph’s Healthcare Hamilton; Memorial University of Newfoundland; Programs for Assessment of Technology in Health Research Institute","funders":"","keywords":"Health technology; Mainstream; Technology assessment; Management science; Risk analysis (engineering); Health care; Emerging technologies; Medicine; Engineering ethics; Computer science; Engineering; Political science","score_opus":0.5259413658451713,"score_gpt":0.5892045963277763,"score_spread":0.06326323048260507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240040581","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00004636477,0.06041585,0.8851274,0.031179918,0.0011664305,0.0008880598,0.00010927788,0.00006733168,0.020999348],"genre_scores_gemma":[0.00030312766,0.0017654204,0.9699134,0.023493873,0.00014948231,0.00016464123,0.00008051156,0.000110439105,0.004019076],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.98931175,0.001967139,0.006214809,0.001676058,0.00010391969,0.0007263126],"domain_scores_gemma":[0.9900456,0.0042132465,0.0040366626,0.0014458017,0.000119830904,0.00013885496],"candidate_categories":["metaresearch","metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.039237153,0.0005089946,0.0029066543,0.00197444,0.00013444723,0.00005205877,0.0006810314,0.0013831271,0.0012546855],"category_scores_gemma":[0.008815469,0.00067170075,0.00034583147,0.00024584457,0.00022368522,0.00008339518,0.00029691707,0.0010608879,0.00026713358],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010335004,0.000033869368,0.0015910036,0.0002857375,0.0000813875,0.000024005987,0.000036966183,0.00016850476,0.00006389104,0.96035355,0.0007135783,0.036637146],"study_design_scores_gemma":[0.0006365558,0.00032575236,0.00032635283,0.0035325075,0.000013846296,0.000020537087,0.00008288307,0.002322648,0.00004361333,0.76014537,0.23168737,0.0008625919],"about_ca_topic_score_codex":0.00008803474,"about_ca_topic_score_gemma":0.0000865257,"teacher_disagreement_score":0.23097378,"about_ca_system_score_codex":0.002131209,"about_ca_system_score_gemma":0.0012399474,"threshold_uncertainty_score":0.9999133},"labels":[],"label_agreement":null},{"id":"W4240588920","doi":"10.1007/978-1-61779-191-8","title":"Permeability Barrier","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Barrier Structure and Function Studies","field":"Neuroscience","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"","keywords":"Permeability (electromagnetism); Chemistry; Membrane","score_opus":0.06178566215326214,"score_gpt":0.38734494929152674,"score_spread":0.3255592871382646,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240588920","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000044871984,0.0009411334,0.35575053,0.000044211025,0.0018338579,0.0003076639,0.00004639757,0.00007187761,0.64095944],"genre_scores_gemma":[0.00031663012,0.00031240768,0.5101295,0.0059969225,0.00034176192,0.00017169441,0.000023230998,0.00013464486,0.48257318],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99593383,0.0020120041,0.00045571267,0.0010743985,0.00010393263,0.00042013702],"domain_scores_gemma":[0.9983942,0.00054609904,0.00017347916,0.0007536596,0.00004735235,0.00008523701],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00090257806,0.00039815603,0.0007121054,0.00024913225,0.00008561959,0.000011109089,0.00046000048,0.0007894333,0.0007789368],"category_scores_gemma":[0.002347565,0.00033975174,0.00023511391,0.00014943883,0.0007579881,0.000022011836,0.00036698405,0.00084486976,0.000058021422],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007593878,0.000031718675,0.00029127407,0.00006847863,0.00005244383,0.00012692854,0.00047359391,0.0000010873052,0.7822693,0.15663002,0.0022721638,0.05770704],"study_design_scores_gemma":[0.00016782776,0.00009389783,0.000047000965,0.000011021334,0.000028300348,0.000024860377,0.000005687945,0.0000035394671,0.13617776,0.32490084,0.53820443,0.00033481693],"about_ca_topic_score_codex":0.000009773149,"about_ca_topic_score_gemma":0.000006112708,"teacher_disagreement_score":0.6460915,"about_ca_system_score_codex":0.00010100682,"about_ca_system_score_gemma":0.00017927366,"threshold_uncertainty_score":0.99990547},"labels":[],"label_agreement":null},{"id":"W4240892458","doi":"10.1007/978-1-0716-1138-8_21","title":"Evidence-Based Decision-Making 1: Critical Appraisal","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Critical appraisal; Credibility; Evidence-based medicine; Management science; Systematic review; Process (computing); Quality (philosophy); Randomized controlled trial; Psychology; Medicine; Computer science; MEDLINE; Alternative medicine; Engineering; Political science; Pathology","score_opus":0.7259059478737768,"score_gpt":0.6776096187438295,"score_spread":0.0482963291299473,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4240892458","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0058204546,0.008786846,0.9805892,0.001738975,0.0011485234,0.00016576482,0.0000035300777,0.0000060146126,0.0017406909],"genre_scores_gemma":[0.07582051,0.000017439474,0.9223936,0.0015732307,0.00005184469,0.000037515758,0.0000020266407,0.0000123499785,0.00009146631],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.90611506,0.083354786,0.00657075,0.0016871212,0.0018145291,0.00045775043],"domain_scores_gemma":[0.69117206,0.29751763,0.0018449046,0.007062433,0.0021566076,0.0002463491],"candidate_categories":["metaresearch","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.17111972,0.00028484294,0.002896369,0.0005089991,0.00007972021,0.00037283177,0.0016396596,0.00025925747,0.010937185],"category_scores_gemma":[0.76474404,0.00016061969,0.0015087022,0.0023698078,0.00019600945,0.00009497673,0.00034577245,0.0003151058,0.00058689975],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002761537,0.00012803098,0.021023214,0.000043014385,0.000099645695,0.00049878604,0.00011221754,0.00063219963,0.09946553,0.065749735,0.0021754762,0.8100445],"study_design_scores_gemma":[0.00057736033,0.00020058997,0.006132314,0.0009598613,0.0003519798,0.0001885931,0.00062103407,0.07316126,0.02705656,0.74594486,0.14381044,0.0009951694],"about_ca_topic_score_codex":0.000003002887,"about_ca_topic_score_gemma":0.00001011622,"teacher_disagreement_score":0.80904937,"about_ca_system_score_codex":0.000035244004,"about_ca_system_score_gemma":0.0002218533,"threshold_uncertainty_score":0.9899669},"labels":[],"label_agreement":null},{"id":"W4241090182","doi":"10.1007/978-1-0716-0771-8","title":"Gapmers","year":2020,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Synthesis and properties of polymers","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"RNase H; RNase P; Gene knockdown; Oligonucleotide; RNA; Biology; Computational biology; Genetics; Gene","score_opus":0.04037874303849328,"score_gpt":0.3720625439473326,"score_spread":0.33168380090883937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241090182","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008474199,0.012726137,0.35559118,0.0010749281,0.0020563807,0.00038943262,0.000052536616,0.000116253206,0.6279084],"genre_scores_gemma":[0.000017615444,0.00014884389,0.90530634,0.0026470684,0.00020268344,0.000046676512,0.000036078673,0.00008264766,0.09151204],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971296,0.0013383582,0.00040664585,0.0006472207,0.00009848427,0.0003796789],"domain_scores_gemma":[0.99900544,0.0002893203,0.00016791113,0.00042465286,0.000021968604,0.00009069573],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011091426,0.00030509438,0.0006641873,0.00013388738,0.000031091582,0.00002235827,0.0006174483,0.00055937923,0.0017732393],"category_scores_gemma":[0.0005075803,0.00026095138,0.00017372638,0.00006511946,0.00029687752,0.000016297616,0.00024420876,0.00033849326,0.000361303],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023446559,0.0000064366504,0.0000038396497,0.000034781184,0.000017659073,0.000047749403,0.00006638231,0.0000027887916,0.9592037,0.004725212,0.0027362225,0.033131782],"study_design_scores_gemma":[0.00010733289,0.000085161824,0.0000010457821,0.000040193372,0.00002432475,0.0000050558433,0.000010491204,0.00001319653,0.52946097,0.012845406,0.45710492,0.00030190838],"about_ca_topic_score_codex":0.00003393382,"about_ca_topic_score_gemma":0.0000032725177,"teacher_disagreement_score":0.54971516,"about_ca_system_score_codex":0.00009027651,"about_ca_system_score_gemma":0.00022389961,"threshold_uncertainty_score":0.99998426},"labels":[],"label_agreement":null},{"id":"W4241236352","doi":"10.1007/978-1-61779-555-8_3","title":"Detecting Pedigree Relationship Errors","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Ontario; University of Toronto","funders":"","keywords":"False positive paradox; Linkage (software); Computer science; Data mining; Genetic association; Genome-wide association study; R package; Software; False positives and false negatives; Computational biology; Biology; Artificial intelligence; Genetics; Programming language; Genotype; Single-nucleotide polymorphism; Gene","score_opus":0.07696168338122138,"score_gpt":0.40342519737188637,"score_spread":0.326463513990665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241236352","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35798132,0.00046248923,0.6358011,0.000063954845,0.00021864416,0.00012450144,0.0000027176422,0.000014482026,0.0053307777],"genre_scores_gemma":[0.4324826,0.000020894553,0.5669903,0.0002664359,0.00004696685,0.00003736827,0.000023494753,0.000017570448,0.000114330614],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99712276,0.0015197251,0.0004153278,0.0004819817,0.000039913735,0.00042029712],"domain_scores_gemma":[0.9991543,0.00012641994,0.00015595496,0.00043654867,0.000057883193,0.00006888575],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019433183,0.0001780937,0.0002496294,0.0001385044,0.000073852614,0.000003773765,0.0002606367,0.00045915224,0.000047208126],"category_scores_gemma":[0.0027631498,0.0001780729,0.00011966746,0.00021142773,0.00012707384,0.00000182465,0.00016080025,0.00022430599,0.000013354122],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028124066,0.000044630353,0.5405434,0.0000051768766,0.000038070542,0.0000060660195,0.0001891979,0.000045311648,0.44723806,0.0020898136,0.00004596846,0.009726224],"study_design_scores_gemma":[0.0015356023,0.0010846114,0.60158044,0.000018334333,0.00007495808,0.00009633756,0.00069039577,0.0005127971,0.2982949,0.08602482,0.009002088,0.00108472],"about_ca_topic_score_codex":0.00009795046,"about_ca_topic_score_gemma":0.00008830535,"teacher_disagreement_score":0.14894316,"about_ca_system_score_codex":0.00002192589,"about_ca_system_score_gemma":0.000050986684,"threshold_uncertainty_score":0.7261602},"labels":[],"label_agreement":null},{"id":"W4241486942","doi":"10.1007/978-1-0716-1138-8_12","title":"Randomized Controlled Trials 2: Analysis","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Health Systems, Economic Evaluations, Quality of Life","field":"Economics, Econometrics and Finance","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Interim analysis; Interim; Outcome (game theory); Multivariate analysis; Subgroup analysis; Multivariate statistics; Research design; Statistics; Computer science; Econometrics; Mathematics; Randomized controlled trial; Medicine; Geography; Confidence interval; Internal medicine","score_opus":0.4262209816000586,"score_gpt":0.5513407968929094,"score_spread":0.12511981529285077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241486942","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019096487,0.048020396,0.7355271,0.005332392,0.0010332431,0.0025869503,0.00026383274,0.00003344192,0.20718352],"genre_scores_gemma":[0.00007836369,0.0035370495,0.7993504,0.013463281,0.00051264453,0.0011466653,0.00069176237,0.00014498747,0.18107489],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9524555,0.024923297,0.0203204,0.001606986,0.000100156394,0.0005936676],"domain_scores_gemma":[0.9534612,0.03365263,0.011354982,0.001218944,0.00014710121,0.0001650908],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","research_integrity","insufficient_payload"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.2902146,0.00064713403,0.029282255,0.0026770884,0.000069969734,0.00007480661,0.0004861578,0.0014386633,0.0060392763],"category_scores_gemma":[0.12110466,0.000656223,0.0052743303,0.00026057838,0.00028765132,0.000048436243,0.00014880413,0.00065915385,0.00038159508],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0029515561,0.000025789719,0.00006812316,0.00008235001,0.00977556,0.000014271015,0.000104280436,0.00012710145,0.000036788333,0.986093,0.00033139536,0.0003897719],"study_design_scores_gemma":[0.16674007,0.000044120232,0.000007859569,0.0001141946,0.0020138833,0.0000044303274,0.000039364608,0.0028928067,0.0000313479,0.72917324,0.09801106,0.00092760695],"about_ca_topic_score_codex":0.00025014483,"about_ca_topic_score_gemma":0.00007508104,"teacher_disagreement_score":0.25691977,"about_ca_system_score_codex":0.00046490785,"about_ca_system_score_gemma":0.00027903588,"threshold_uncertainty_score":0.99985766},"labels":[],"label_agreement":null},{"id":"W4241618533","doi":"10.1007/978-1-4939-8651-4","title":"Exon Skipping and Inclusion Therapies","year":2018,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Exon skipping; Exon; Genome editing; CRISPR; Computational biology; Cas9; Biology; Genetics; Gene; Computer science; Bioinformatics; Alternative splicing","score_opus":0.01736507950741681,"score_gpt":0.3666787380511659,"score_spread":0.3493136585437491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241618533","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015433543,0.058720496,0.858237,0.00035625897,0.001210885,0.0007881609,0.000024529538,0.000035208708,0.0651939],"genre_scores_gemma":[0.0024154014,0.008606,0.79163605,0.0011326963,0.0017643723,0.00006626309,0.0005323832,0.0001923922,0.19365443],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9977298,0.0005965787,0.00034046598,0.0009478051,0.00008504874,0.00030031937],"domain_scores_gemma":[0.9991073,0.00002715606,0.00017703944,0.0005406883,0.00009025747,0.00005753415],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012827204,0.00034351746,0.00038787356,0.00016623473,0.00020699696,0.00001261211,0.00027523062,0.0010003599,0.000022418135],"category_scores_gemma":[0.00018723059,0.00031325177,0.00011237198,0.00006274056,0.00040777522,0.0000011384985,0.0031347715,0.0002696483,0.000003314267],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047424077,0.00001742144,0.000058202437,0.000034226163,0.000073618976,0.0000058907594,0.00013135583,0.000002355561,0.96098465,0.0010563507,0.0005923468,0.03699616],"study_design_scores_gemma":[0.00030234552,0.0007529553,0.000059287286,0.000057621954,0.000035549874,0.000041966458,0.000015464533,0.000020778567,0.18906349,0.04223492,0.76694936,0.0004662445],"about_ca_topic_score_codex":0.000008330573,"about_ca_topic_score_gemma":0.000012236145,"teacher_disagreement_score":0.77192116,"about_ca_system_score_codex":0.000033046086,"about_ca_system_score_gemma":0.000119963064,"threshold_uncertainty_score":0.99993193},"labels":[],"label_agreement":null},{"id":"W4241721944","doi":"10.1007/978-1-59745-133-8_9","title":"Culturing Olfactory Ensheathing Cells from the Mouse Olfactory Epithelium","year":2008,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Olfactory ensheathing glia; Olfactory bulb; Biology; Olfactory mucosa; Remyelination; Neurogenesis; Olfactory epithelium; Olfactory system; Transplantation; Neuroscience; Population; Regeneration (biology); Neural stem cell; Olfactory nerve; Cell biology; Schwann cell; Central nervous system; Anatomy; Stem cell; Myelin; Medicine; Internal medicine","score_opus":0.09126889325316029,"score_gpt":0.34225322695452565,"score_spread":0.25098433370136536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4241721944","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.033131517,0.011543368,0.7808629,0.00080537586,0.007840067,0.0022859268,0.00091589766,0.0004663811,0.1621485],"genre_scores_gemma":[0.008770371,0.01041375,0.66552114,0.015915172,0.0029162508,0.0001732395,0.00048059976,0.00069961254,0.29510987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956115,0.002171481,0.00058260193,0.0010268777,0.00019126208,0.00041626187],"domain_scores_gemma":[0.99755836,0.0011860685,0.0003151761,0.0008281613,0.000034509703,0.00007771817],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00077429437,0.0005107174,0.0005713723,0.00016063932,0.00025172552,0.000034772464,0.0007263791,0.0009066708,0.00017805658],"category_scores_gemma":[0.00042033457,0.00035916636,0.00030529432,0.000056025543,0.0005295451,0.000054517044,0.0002725139,0.001344767,0.00008621903],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017001088,0.000015090411,0.0000060671973,0.0000071173213,0.000019429834,0.000120467375,0.000289599,0.00007521552,0.9873667,0.006507899,0.00023446188,0.005340991],"study_design_scores_gemma":[0.0001569141,0.000049214646,0.0000048301977,0.000033056942,0.000022815499,0.00001958963,0.0000057013754,0.000039431925,0.8663168,0.006549981,0.12642787,0.0003738168],"about_ca_topic_score_codex":0.00007061175,"about_ca_topic_score_gemma":0.00001597813,"teacher_disagreement_score":0.13296136,"about_ca_system_score_codex":0.00011333602,"about_ca_system_score_gemma":0.000074617135,"threshold_uncertainty_score":0.99988604},"labels":[],"label_agreement":null},{"id":"W4242075296","doi":"10.1007/978-1-0716-1138-8_9","title":"Longitudinal Studies 4: Matching Strategies to Evaluate Risk","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Propensity score matching; Confounding; Observational study; Matching (statistics); Psychological intervention; Contrast (vision); Outcome (game theory); Medicine; Econometrics; Statistics; Computer science; Mathematics; Artificial intelligence","score_opus":0.3028601004233612,"score_gpt":0.5709415834095312,"score_spread":0.26808148298616996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242075296","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015957654,0.008148379,0.9322862,0.00008147652,0.0002736173,0.00052945124,0.000026441532,0.00019741591,0.05829741],"genre_scores_gemma":[0.00006172246,0.002215663,0.9864684,0.00014876628,0.00007200495,0.00013686896,0.000017446417,0.00012157117,0.010757585],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9962972,0.0012702267,0.00083146547,0.0009271374,0.00019547678,0.000478504],"domain_scores_gemma":[0.9963726,0.001858466,0.00045287423,0.00091431197,0.0003220857,0.000079704965],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003184288,0.00063789345,0.0014502136,0.00040142212,0.00006908662,0.000035697874,0.0004346189,0.0006697966,0.0001679343],"category_scores_gemma":[0.002750641,0.0005876537,0.0002435547,0.000103475926,0.00024522416,0.000058649675,0.0007022026,0.0011080498,0.000018038545],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015662155,0.000015176939,0.000015465297,0.0001511395,0.00030634395,0.00021482068,0.0002961152,0.000055121647,0.018952444,0.95562065,0.00004706665,0.024309978],"study_design_scores_gemma":[0.00011740034,0.00019014053,0.0000037030813,0.0004158768,0.00017734102,0.000026383743,0.00021703284,0.0000067103338,0.010397524,0.981908,0.005981855,0.00055799494],"about_ca_topic_score_codex":0.000017388811,"about_ca_topic_score_gemma":0.00012482771,"teacher_disagreement_score":0.054182142,"about_ca_system_score_codex":0.00024185763,"about_ca_system_score_gemma":0.00013672662,"threshold_uncertainty_score":0.9996575},"labels":[],"label_agreement":null},{"id":"W4242191520","doi":"10.1007/978-1-61779-527-5_10","title":"The Macrophage","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Macrophage; Phenotype; Cell biology; Function (biology); Biology; Bone marrow; Immunology; In vitro; Genetics; Gene","score_opus":0.05260860456838843,"score_gpt":0.4390326364540725,"score_spread":0.386424031885684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242191520","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[1.438372e-7,0.93966174,0.048370954,0.0000110930405,0.0046405275,0.0006493379,0.000017792809,0.000036543166,0.0066118874],"genre_scores_gemma":[6.721079e-8,0.9301574,0.06435655,0.00009242858,0.000030402867,0.0003779465,0.000080199374,0.000081471684,0.0048234994],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9882063,0.009295996,0.00094444025,0.00070418173,0.000015068491,0.0008339744],"domain_scores_gemma":[0.99673533,0.0014832225,0.00043868995,0.0012853312,0.00003991358,0.000017481167],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0028165358,0.0005677326,0.0017749611,0.00022999736,0.00016950641,0.00001309733,0.0015069426,0.0018187705,0.0006839749],"category_scores_gemma":[0.0005765489,0.00035452732,0.00061810174,0.00036942156,0.0009490176,0.000011550904,0.0005918265,0.0017462915,0.0011616686],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009927507,0.000022503822,7.8432754e-7,0.00045789476,0.00030400744,0.000019825795,0.000027467591,3.446678e-8,0.0039487053,0.008603804,0.0002783842,0.98632663],"study_design_scores_gemma":[0.00020723169,0.00006767023,3.9290208e-7,0.0005636105,0.00022240849,0.00014542673,0.000006870985,5.3733476e-8,0.0030972331,0.0027036886,0.9926222,0.00036320693],"about_ca_topic_score_codex":0.000047523903,"about_ca_topic_score_gemma":0.000006895952,"teacher_disagreement_score":0.99234384,"about_ca_system_score_codex":0.00013868387,"about_ca_system_score_gemma":0.00022532305,"threshold_uncertainty_score":0.9998907},"labels":[],"label_agreement":null},{"id":"W4242251623","doi":"10.1007/978-1-62703-845-4_29","title":"Detection of Intact Transcription Factors in Human Neutrophils","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Chemokine; Transcription factor; Innate immune system; Proteases; Immunology; Biology; Inflammation; Cell biology; Endogeny; Gene; Immune system; Genetics; Enzyme; Biochemistry","score_opus":0.02233252754073685,"score_gpt":0.33677436907430625,"score_spread":0.3144418415335694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242251623","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6073651,0.00018470526,0.39184555,0.000023535176,0.0002718081,0.00014326448,0.000003296067,0.000016287091,0.00014644295],"genre_scores_gemma":[0.98221046,0.000017508659,0.017552309,0.00009178513,0.000010760769,0.000026492628,0.000045604676,0.000018352846,0.000026700423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99562305,0.003165009,0.00047708701,0.00038523998,0.000018871004,0.00033071352],"domain_scores_gemma":[0.9993745,0.00016541033,0.00013344732,0.00027657868,0.000034108234,0.000015944965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010557466,0.00020451304,0.0004902954,0.00047775026,0.0000438775,0.0000031121729,0.00020967607,0.00041431663,0.00007720428],"category_scores_gemma":[0.00014755227,0.00018233088,0.0001131301,0.00029939986,0.00017451691,0.000038891165,0.00004598798,0.000398624,0.000007982968],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000053203174,0.00008197833,0.0016429109,0.000012716539,0.000026226022,0.000002415359,0.00018042294,0.000013564848,0.97483456,0.012208041,4.4555716e-7,0.010943505],"study_design_scores_gemma":[0.0009896597,0.0005815188,0.0064053643,0.000018883313,0.000014204766,0.000005769561,0.00007283362,0.0000069059815,0.977918,0.01299513,0.00082694396,0.00016477621],"about_ca_topic_score_codex":0.00025938675,"about_ca_topic_score_gemma":0.00009222193,"teacher_disagreement_score":0.3748454,"about_ca_system_score_codex":0.000047918173,"about_ca_system_score_gemma":0.000011703634,"threshold_uncertainty_score":0.7435238},"labels":[],"label_agreement":null},{"id":"W4242253679","doi":"10.1007/978-1-60761-646-7","title":"Plant Epigenetics","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Epigenetics; Biology; Genetics; Gene","score_opus":0.0427100427903623,"score_gpt":0.3715856648253254,"score_spread":0.3288756220349631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242253679","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0336729,0.02012762,0.07831357,0.0042479914,0.0054667396,0.0053964523,0.0054167816,0.0006704127,0.84668756],"genre_scores_gemma":[0.0002345243,0.0015712864,0.7215403,0.0028060088,0.0012301865,0.00028072667,0.011752814,0.000033103548,0.26055107],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99586177,0.0016520761,0.0005274224,0.00096852996,0.00017010595,0.00082008145],"domain_scores_gemma":[0.9982629,0.0010238113,0.00020226899,0.0002706284,0.00007429729,0.00016608286],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018247295,0.00047838688,0.000778367,0.00010547156,0.0000794737,0.000028036744,0.001137751,0.0025385506,0.00058016984],"category_scores_gemma":[0.0005140574,0.00020735856,0.0002601633,0.00021594654,0.00041650605,0.000010492988,0.0005217808,0.001986624,0.00010449876],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021717742,0.00003253409,0.0003329073,0.000008915364,0.000038439845,0.000220484,0.000005719514,5.335759e-7,0.92512554,0.0037257855,0.00089289574,0.06959453],"study_design_scores_gemma":[0.00016644898,0.0004038795,0.0004827411,0.00004232763,0.000027321297,0.0001221913,0.0000038026556,0.000026629636,0.06454053,0.056514688,0.8769821,0.00068736525],"about_ca_topic_score_codex":0.000056635774,"about_ca_topic_score_gemma":0.00068885356,"teacher_disagreement_score":0.87608916,"about_ca_system_score_codex":0.00007562722,"about_ca_system_score_gemma":0.000116087926,"threshold_uncertainty_score":0.99875635},"labels":[],"label_agreement":null},{"id":"W4242526759","doi":"10.1007/978-1-4939-9597-4_20","title":"Prioritization of Therapeutic Targets of Inflammation Using Proteomics, Bioinformatics, and In Silico Cell-Cell Interactomics","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Druggability; Leukocyte extravasation; Proteomics; In silico; Computational biology; Glycoproteomics; Chemokine; Bioinformatics; Inflammation; Biology; Immunology; Gene","score_opus":0.023403159110113803,"score_gpt":0.3945870353281902,"score_spread":0.3711838762180764,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242526759","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8647638,0.0006659489,0.13368896,0.00006020247,0.00004280872,0.00049807865,0.0000035212831,0.0000023217624,0.0002743822],"genre_scores_gemma":[0.46507803,0.00014891684,0.53466916,0.00004080339,0.0000073869364,0.0000031357863,0.000020257818,0.0000074740033,0.000024818752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891603,0.00030260262,0.00044708533,0.000121389654,0.000068569876,0.00014429662],"domain_scores_gemma":[0.999482,0.00013399438,0.00015490319,0.00012939758,0.000074151445,0.000025597905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007026403,0.00008804917,0.00032621116,0.00028276315,0.000005851211,0.000002582107,0.000061891646,0.00012447861,0.000017629947],"category_scores_gemma":[0.00010042372,0.00007506816,0.00003803808,0.00016758284,0.00008794361,0.000032542957,0.000069567475,0.00016349771,0.0000010993111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019165566,0.00004476045,0.08725861,0.0005295062,0.000010270383,0.000001774434,0.00038202092,0.00009874747,0.90516424,0.0002598126,1.5378727e-7,0.006058473],"study_design_scores_gemma":[0.00084189937,0.00022271839,0.0052688755,0.000084090636,0.000009498408,0.0000063845687,0.00011557303,0.054596208,0.93753195,0.0011961275,0.000057461853,0.00006921283],"about_ca_topic_score_codex":0.0001133609,"about_ca_topic_score_gemma":0.000006748863,"teacher_disagreement_score":0.40098023,"about_ca_system_score_codex":0.000030072388,"about_ca_system_score_gemma":0.000063629705,"threshold_uncertainty_score":0.30611905},"labels":[],"label_agreement":null},{"id":"W4242864768","doi":"10.1007/978-1-0716-1095-4_6","title":"Mutant Mice and Animal Models of Airway Allergic Disease","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"IL-33, ST2, and ILC Pathways","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut universitaire de cardiologie et de pneumologie de Québec","funders":"","keywords":"Animal model; Mutant; Immunology; Airway; Biology; Disease; Medicine; Genetics; Pathology; Endocrinology; Surgery","score_opus":0.028573243439852014,"score_gpt":0.3145288753143617,"score_spread":0.2859556318745097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242864768","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015070205,0.19502833,0.51219517,0.00037423157,0.0032136203,0.001692509,0.00819015,0.00016542793,0.26407033],"genre_scores_gemma":[0.05958209,0.030553736,0.62846637,0.0027663552,0.0003269601,0.00023377012,0.0053485413,0.00069989456,0.27202228],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99693954,0.0010315111,0.00066417106,0.00086514466,0.00003561198,0.00046403223],"domain_scores_gemma":[0.99868196,0.00026351615,0.00029281538,0.00056973245,0.00013100433,0.000060954586],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006935847,0.0005007343,0.0011165171,0.00028936836,0.000060736696,0.000005829754,0.00031890665,0.0012727913,0.00027773512],"category_scores_gemma":[0.00022534623,0.0004786983,0.0002546048,0.00006500548,0.00071686314,0.0000266239,0.00040238356,0.00074768346,0.000019769885],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023609363,0.000049442115,0.000013492568,0.00011463119,0.00029991308,0.00018544983,0.00013494251,0.000009262295,0.7784022,0.21615773,0.0000489089,0.0043479074],"study_design_scores_gemma":[0.0030079563,0.0011026779,0.000062256455,0.00055286416,0.00057872426,0.0003068759,0.00010999883,0.000115569645,0.43851593,0.20799793,0.34590974,0.0017394725],"about_ca_topic_score_codex":0.000036520752,"about_ca_topic_score_gemma":0.000017353932,"teacher_disagreement_score":0.34586084,"about_ca_system_score_codex":0.00003927432,"about_ca_system_score_gemma":0.0002508386,"threshold_uncertainty_score":0.99976647},"labels":[],"label_agreement":null},{"id":"W4242877320","doi":"10.1007/978-1-59745-385-1_17","title":"Research Ethics for Clinical Researchers","year":2008,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Ethics in medical practice","field":"Health Professions","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; St. John’s Health Sciences Centre","funders":"","keywords":"Confidentiality; Engineering ethics; Variety (cybernetics); Informed consent; Research ethics; Information ethics; Corporate governance; Political science; Medicine; Business; Engineering; Law; Alternative medicine; Computer science","score_opus":0.8849193804672293,"score_gpt":0.8055151110098142,"score_spread":0.07940426945741508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4242877320","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000032372498,0.0044516954,0.41708612,0.014924642,0.0021206967,0.0022184078,0.000035264977,0.000054920853,0.55910504],"genre_scores_gemma":[0.00000373001,0.022952763,0.74447024,0.008608116,0.0009988318,0.00048751652,0.00009221312,0.00018937999,0.22219719],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.8315558,0.16013801,0.002955527,0.0019114024,0.0012881953,0.0021511016],"domain_scores_gemma":[0.7205046,0.275568,0.0004919803,0.0013194715,0.0017561268,0.00035982105],"candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity"],"consensus_categories":["metaresearch","sts","research_integrity"],"category_scores_codex":[0.3082044,0.00041978116,0.0013597367,0.0008467493,0.001440102,0.0000078125495,0.0014537087,0.014291613,0.0008785971],"category_scores_gemma":[0.42077345,0.00039211486,0.00040252123,0.00022038561,0.004977614,0.000031305022,0.0013890427,0.09559431,0.00046213684],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00051045994,0.0000637336,0.00013039286,0.0006126153,0.00017619121,0.00020303839,0.0012390079,6.104028e-7,0.0005198745,0.93052924,0.03844017,0.027574668],"study_design_scores_gemma":[0.0005598213,0.00030111516,0.000008014705,0.00031250983,0.00001904265,0.000003513995,0.0002106307,0.000017363009,0.000027587046,0.4273942,0.57094604,0.00020013964],"about_ca_topic_score_codex":0.00016354004,"about_ca_topic_score_gemma":0.00013859908,"teacher_disagreement_score":0.53250587,"about_ca_system_score_codex":0.00054276054,"about_ca_system_score_gemma":0.0049216887,"threshold_uncertainty_score":0.99985987},"labels":[],"label_agreement":null},{"id":"W4243066199","doi":"10.1007/978-1-62703-589-7","title":"Immunoproteomics","year":2013,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Hematological disorders and diagnostics","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Computer science","score_opus":0.02819298180751684,"score_gpt":0.40785675531771687,"score_spread":0.37966377351020003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243066199","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023528938,0.0065713697,0.575173,0.00036136352,0.0002792488,0.00096113724,0.000010196485,0.000050515457,0.41635787],"genre_scores_gemma":[0.000011628462,0.0006560427,0.8668782,0.002040519,0.000054479337,0.00012236967,0.00020009064,0.00005537664,0.12998128],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9982094,0.00039770076,0.0004871584,0.0004608173,0.000075006705,0.00036989676],"domain_scores_gemma":[0.99868554,0.00046299497,0.00013228472,0.000536903,0.0000785878,0.000103675164],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.00050805963,0.00031441817,0.0010131471,0.00020473277,0.00001734722,0.000008340809,0.000185627,0.0013710114,0.0006431253],"category_scores_gemma":[0.002023322,0.0002519268,0.00022229359,0.000086814616,0.00023236142,0.0000067075925,0.00015789508,0.00083688274,0.0001961128],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028774998,0.0007597777,0.002500519,0.0011522402,0.00067681586,0.0016915837,0.00014463732,0.000006628779,0.191913,0.600992,0.03125641,0.16861859],"study_design_scores_gemma":[0.0013894789,0.0009021168,0.00028279456,0.00033658138,0.00016496441,0.00015288382,0.000010308263,0.00009816158,0.008279279,0.5242773,0.46348384,0.00062228966],"about_ca_topic_score_codex":0.000020043804,"about_ca_topic_score_gemma":8.251804e-7,"teacher_disagreement_score":0.43222743,"about_ca_system_score_codex":0.00010036383,"about_ca_system_score_gemma":0.00026567254,"threshold_uncertainty_score":0.9999933},"labels":[],"label_agreement":null},{"id":"W4243820337","doi":"10.1007/978-1-4939-7804-5","title":"Fungal Genomics","year":2018,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University","funders":"","keywords":"Genomics; Biology; Computational biology; Genetics; Genome; Gene","score_opus":0.03103061613963191,"score_gpt":0.4237685595961382,"score_spread":0.39273794345650626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243820337","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031620596,0.0034778896,0.45440155,0.00062973314,0.0005247246,0.00075766473,0.00006203596,0.00007034431,0.5397599],"genre_scores_gemma":[0.0000127526755,0.00016869883,0.7613897,0.002102067,0.0003851656,0.000080736034,0.00043620434,0.000048300386,0.23537639],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99820215,0.00047542187,0.00038659686,0.00057752145,0.00004154999,0.00031676158],"domain_scores_gemma":[0.99879533,0.00026952807,0.00013453588,0.00064243266,0.00007265149,0.0000855367],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008951713,0.0002742975,0.0006599699,0.00022237207,0.00003743928,0.000003204649,0.00021997323,0.0013952659,0.00031043857],"category_scores_gemma":[0.00030215472,0.0002460813,0.00018329568,0.00009675814,0.00049029285,0.0000044622334,0.00014227931,0.00077371055,0.00023511206],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000184912,0.00011830814,0.00079316174,0.000121878744,0.00034034438,0.00020530567,0.00005951682,8.213158e-7,0.8491949,0.09894939,0.018990103,0.031041363],"study_design_scores_gemma":[0.00045793704,0.00038148122,0.00012447966,0.000051668914,0.00013391576,0.0001553854,0.0000029333085,0.000017087003,0.03159539,0.08594614,0.88086456,0.0002690183],"about_ca_topic_score_codex":0.0000036086797,"about_ca_topic_score_gemma":0.0000033124209,"teacher_disagreement_score":0.86187446,"about_ca_system_score_codex":0.00018418809,"about_ca_system_score_gemma":0.00040950312,"threshold_uncertainty_score":0.99999917},"labels":[],"label_agreement":null},{"id":"W4243821209","doi":"10.1007/978-1-62703-339-8_14","title":"Fibrinogen","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Blood properties and coagulation","field":"Medicine","cited_by":61,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Alberta Hospital; Alberta Hospital Edmonton","funders":"Canadian Institutes of Health Research","keywords":"Medicine","score_opus":0.031316656576257096,"score_gpt":0.3927082225725722,"score_spread":0.3613915659963151,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243821209","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36670882,0.0013559816,0.6214923,0.0017430867,0.0001198238,0.00037062232,3.445501e-7,0.00003414333,0.0081748525],"genre_scores_gemma":[0.1525284,0.000014278869,0.84556854,0.0014243243,0.0000333207,0.000046363883,0.0000070294086,0.000010139409,0.00036761654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992766,0.00025751145,0.00013873703,0.00014955476,0.000027855896,0.0001497502],"domain_scores_gemma":[0.9996999,0.000029134999,0.000020972793,0.00018190345,0.00003090083,0.000037221376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023092117,0.0000633598,0.0001608578,0.00006145431,0.000010570546,0.000004020631,0.000044523404,0.00010453222,0.00034919096],"category_scores_gemma":[0.00010725251,0.000048145088,0.00004306166,0.000100331374,0.000037971044,0.000013084379,0.000037715254,0.00009018305,0.00005476063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008915984,0.000017216169,0.013041647,0.000008184243,0.00001386006,0.000004835596,0.000023292829,0.0000030620254,0.85533255,0.0012284336,0.000041204996,0.1302768],"study_design_scores_gemma":[0.0010333748,0.00046060188,0.05655648,0.000028396737,0.000039086888,0.00007482911,0.000050397084,0.0016856021,0.89867246,0.02524779,0.015960272,0.00019069703],"about_ca_topic_score_codex":0.000151503,"about_ca_topic_score_gemma":0.0000010930802,"teacher_disagreement_score":0.22407618,"about_ca_system_score_codex":0.000012612367,"about_ca_system_score_gemma":0.000015426367,"threshold_uncertainty_score":0.38233963},"labels":[],"label_agreement":null},{"id":"W4243890160","doi":"10.1007/978-1-61779-210-6_17","title":"Reptile Embryology","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic and Clinical Aspects of Sex Determination and Chromosomal Abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Zoology; Embryology; Animal husbandry; Lizard; Anatomy; Evolutionary biology; Ecology; Agriculture","score_opus":0.03518338494060884,"score_gpt":0.376769682980762,"score_spread":0.34158629804015317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243890160","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43489236,0.0009556682,0.5038389,0.00011313167,0.00045385343,0.00019490298,0.0000063548223,0.000029098443,0.059515737],"genre_scores_gemma":[0.4043191,0.00012076343,0.592318,0.0014347316,0.000079934485,0.00005049342,0.00003660115,0.000022407097,0.0016179472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835706,0.0005302635,0.00034346324,0.00042279932,0.000040651932,0.0003057652],"domain_scores_gemma":[0.9994104,0.00002821758,0.00007750596,0.00036439957,0.00004740037,0.00007206138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005309124,0.00015557121,0.0002153819,0.00007152659,0.0000310974,0.0000047720587,0.000278285,0.00029553034,0.0003467953],"category_scores_gemma":[0.00025026698,0.00014364158,0.00010852825,0.0000958851,0.00023288517,0.0000016633261,0.0001646751,0.00012741929,0.000021387612],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007059337,0.00013531606,0.007632984,0.000007945733,0.000034095665,0.000030100966,0.00013416205,0.0000024661733,0.9555151,0.0105242,0.0000935727,0.02581948],"study_design_scores_gemma":[0.000675846,0.00093998096,0.007855782,0.0000064170845,0.000013547135,0.00005951633,0.00022826697,0.000020771651,0.9425939,0.024272181,0.02299601,0.00033783176],"about_ca_topic_score_codex":0.00002626494,"about_ca_topic_score_gemma":0.00001581757,"teacher_disagreement_score":0.08847911,"about_ca_system_score_codex":0.000006152217,"about_ca_system_score_gemma":0.000033472894,"threshold_uncertainty_score":0.5857533},"labels":[],"label_agreement":null},{"id":"W4243984899","doi":"10.1007/978-1-4939-6625-7_24","title":"Isolation and Differentiation of Human Macrophages","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"British Heart Foundation","keywords":"Isolation (microbiology); Biology; Microbiology","score_opus":0.022428455927325692,"score_gpt":0.3895714088913524,"score_spread":0.3671429529640267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4243984899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66490906,0.0037155682,0.32947934,0.000080251186,0.00062342494,0.00012981963,0.0000043927225,0.0000106431025,0.0010474861],"genre_scores_gemma":[0.9092861,0.000073816314,0.09030022,0.000031564647,0.0000073663755,0.0000120257455,0.00002319618,0.000009149029,0.00025656316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99871314,0.0006890447,0.00022778238,0.00020610541,0.00000879368,0.00015512049],"domain_scores_gemma":[0.99925965,0.000086771804,0.0002229521,0.00039608576,0.000029323017,0.0000052010537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005374653,0.00009449928,0.0002386196,0.00009250892,0.00012863499,0.00000755205,0.00021009956,0.00024880102,0.000104872124],"category_scores_gemma":[0.00023336353,0.000088323824,0.000036933394,0.000024311666,0.00040880244,0.000027994549,0.00016427884,0.00015660864,0.0000040614595],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017632623,0.000019098308,0.0257604,0.000012685455,0.000033429405,9.700028e-7,0.000092475355,6.489589e-7,0.95020443,0.004624587,0.000006258268,0.019227399],"study_design_scores_gemma":[0.000647338,0.00009767133,0.07445109,0.000012855305,0.000015674583,0.000004687224,0.000016286007,0.000009836666,0.915411,0.008925689,0.0003253057,0.000082583],"about_ca_topic_score_codex":0.00011529322,"about_ca_topic_score_gemma":0.000012421335,"teacher_disagreement_score":0.24437703,"about_ca_system_score_codex":0.000014502097,"about_ca_system_score_gemma":0.000008715569,"threshold_uncertainty_score":0.3601741},"labels":[],"label_agreement":null},{"id":"W4244404255","doi":"10.1007/978-1-4939-6591-5_15","title":"Serum-Stable, Long-Circulating, pH-Sensitive PEGylated Liposomes","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanoparticle-Based Drug Delivery","field":"Materials Science","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biomod (Canada); Wilfrid Laurier University; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Liposome; Pharmacology; Chemistry; Chromatography; Medicine; Biochemistry","score_opus":0.01944406499641623,"score_gpt":0.3450256183369054,"score_spread":0.3255815533404892,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244404255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57298446,0.00025155186,0.42556354,0.00029456103,0.00036966862,0.0001826168,0.000021059235,0.000090095426,0.00024244272],"genre_scores_gemma":[0.62428737,0.000015115076,0.37492523,0.0004919393,0.00004884905,0.000030875843,0.000004290438,0.000035109413,0.00016123382],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9949809,0.0029153365,0.0005105505,0.00072131027,0.00014203764,0.0007298685],"domain_scores_gemma":[0.9981511,0.00082576426,0.00017976051,0.000584707,0.0001410929,0.00011756106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022943893,0.00026515615,0.0004515046,0.00021503792,0.00007001702,0.000028035964,0.00033714782,0.0002527609,0.00045047444],"category_scores_gemma":[0.0013364193,0.00019378401,0.00010053956,0.00041835688,0.00034942362,0.00010999081,0.00023078562,0.00014556204,0.00027309652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004830144,0.000055058812,0.0042312047,0.000009201232,0.000016035283,0.00020499733,0.0000794164,0.000078446494,0.977541,0.001385503,0.000015118686,0.016335668],"study_design_scores_gemma":[0.0007970608,0.00011861485,0.0019688837,0.000052223284,0.000018891931,0.00004448758,0.000024017669,0.00023424554,0.99182117,0.0043739364,0.00024729376,0.0002991568],"about_ca_topic_score_codex":0.000103614184,"about_ca_topic_score_gemma":0.000022812399,"teacher_disagreement_score":0.051302884,"about_ca_system_score_codex":0.00013377279,"about_ca_system_score_gemma":0.00009114911,"threshold_uncertainty_score":0.7902283},"labels":[],"label_agreement":null},{"id":"W4244976665","doi":"10.1007/978-1-61779-173-4","title":"Yeast Systems Biology","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institutes of Health; Curtin University of Technology; Centre National de la Recherche Scientifique; Yale University; University of Toronto; National Science and Technology Development Agency; Magyar Tudományos Akadémia; University of Warwick; Weizmann Institute of Science; Rutgers Cancer Institute of New Jersey; Radboud Universiteit; National Heart, Lung, and Blood Institute; Australian National University; University of Bristol; Hospital for Sick Children; Humboldt-Universität zu Berlin; York University; Stowers Institute for Medical Research; Université de Bordeaux; Monash University; Aberystwyth University; Chalmers Tekniska Högskola; Hebrew University of Jerusalem; Grantová Agentura, Univerzita Karlova; University of Manchester","keywords":"Biology; Systems biology; Phenotype; Yeast; Computational biology; Gene; Genetics","score_opus":0.017884377935978482,"score_gpt":0.3262161436127353,"score_spread":0.30833176567675685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4244976665","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00060940976,0.026329437,0.8792589,0.000026902091,0.004980314,0.0007111954,0.00014527919,0.00007015023,0.08786844],"genre_scores_gemma":[0.0013441923,0.0029871645,0.5602321,0.00038480203,0.0033578086,0.0002472417,0.0029810087,0.00036037582,0.42810532],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969536,0.0008110046,0.00057934015,0.0010744762,0.000050750725,0.0005308023],"domain_scores_gemma":[0.9986206,0.000010696739,0.00024355958,0.00093156705,0.00010085981,0.000092669],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011398153,0.00052466267,0.0007296591,0.00031669947,0.00003286527,0.000013244511,0.0005036148,0.0017417733,0.000038840044],"category_scores_gemma":[0.00027499045,0.00050538016,0.00023202348,0.000118738266,0.00024071654,0.0000013814048,0.00026946308,0.00051954563,0.000036463407],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031015887,0.00003056782,0.00002148375,0.00006818606,0.00013103163,0.00000774403,0.000012297831,0.000032845765,0.97882783,0.011381754,0.0017131981,0.0077420706],"study_design_scores_gemma":[0.00028108488,0.00025306834,0.000007649305,0.0000489249,0.00004882171,0.00007087271,0.0000037122975,0.0000106374055,0.22189325,0.0028336884,0.77400947,0.0005388511],"about_ca_topic_score_codex":0.00006329972,"about_ca_topic_score_gemma":0.000007652905,"teacher_disagreement_score":0.77229625,"about_ca_system_score_codex":0.000056433768,"about_ca_system_score_gemma":0.00019754158,"threshold_uncertainty_score":0.99973977},"labels":[],"label_agreement":null},{"id":"W4245094122","doi":"10.1007/978-1-59745-512-1","title":"Salmonella","year":2007,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Biodesign Institute, Arizona State University; Technion-Israel Institute of Technology; Centre National de la Recherche Scientifique; University of New South Wales; Public Health Agency; University of Bristol; University of Sydney; University of Missouri; School of Medicine, Case Western Reserve University; Arizona State University; Public Health Agency of Canada; Case Western Reserve University; Institut National de la Santé et de la Recherche Médicale; Queen's University; Ohio State University","keywords":"Salmonella; Biology; Bacteria; Genetics","score_opus":0.046583670493057,"score_gpt":0.3824001529382599,"score_spread":0.3358164824452029,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245094122","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0052862694,0.010961432,0.07762197,0.00073105464,0.0019098787,0.0009091211,0.00010365084,0.00023935734,0.9022373],"genre_scores_gemma":[0.00034884186,0.0011269805,0.5330661,0.008793009,0.001992213,0.00010866274,0.0020200177,0.000026774844,0.45251742],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957405,0.0016631079,0.00076014036,0.0009456727,0.00010497628,0.0007856572],"domain_scores_gemma":[0.99740833,0.0018790172,0.00029909817,0.00021160547,0.000060346963,0.000141572],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0029998245,0.0004879437,0.0010102561,0.000091780814,0.000050910232,0.0000138118,0.0006983669,0.0018579047,0.00073253224],"category_scores_gemma":[0.00038990888,0.00020739107,0.00035483626,0.00026248847,0.00028842958,0.000014033648,0.00026769025,0.0008485948,0.00012199698],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004748979,0.00005257577,0.001720639,0.000015601952,0.000062038824,0.00019562406,0.00001657799,0.0000018973252,0.59045017,0.018583687,0.0031769897,0.3856767],"study_design_scores_gemma":[0.00014752698,0.00030670213,0.0018231728,0.000042408807,0.000033136585,0.000054889366,0.000011116927,0.000009144444,0.0054601138,0.19545206,0.79600286,0.00065688853],"about_ca_topic_score_codex":0.00010350513,"about_ca_topic_score_gemma":0.0001487714,"teacher_disagreement_score":0.7928258,"about_ca_system_score_codex":0.00013435706,"about_ca_system_score_gemma":0.000039419505,"threshold_uncertainty_score":0.99943787},"labels":[],"label_agreement":null},{"id":"W4245203758","doi":"10.1007/978-1-61779-148-2_8","title":"Organelle Proteomics","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Research in Immunology and Cancer; Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Organelle; Proteomics; Cell fractionation; Computational biology; Cell; Cell biology; Proteome; Cell function; Isolation (microbiology); Biology; Fractionation; Chemistry; Bioinformatics; Biochemistry; Chromatography; Enzyme; Gene","score_opus":0.03482148265949815,"score_gpt":0.3777355049859539,"score_spread":0.34291402232645574,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245203758","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009349641,0.00006756474,0.8303283,0.00004613079,0.000015337935,0.00008109881,0.0000031238246,0.00008467887,0.16002414],"genre_scores_gemma":[0.033197712,0.00001931369,0.96625674,0.00008744178,0.000014494488,0.00013969846,0.0000079690335,0.000016108434,0.00026051473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999272,0.00008767579,0.0001764859,0.00024489817,0.000023488907,0.0001954776],"domain_scores_gemma":[0.99948937,0.000032685424,0.000052024083,0.00037586343,0.000016716851,0.0000333475],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003031442,0.00009511221,0.00014573838,0.000067865185,0.00002154227,0.0000031547022,0.000248893,0.00017532305,0.004781897],"category_scores_gemma":[0.00009590408,0.00009065737,0.00004430524,0.00019013564,0.00006345827,0.0000074994337,0.00009284212,0.00018713712,0.000010445997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000038516455,0.000043684286,0.0017087783,0.00000752713,0.000005763895,0.0000048347183,0.000034313558,8.540847e-8,0.8730254,0.12096235,0.00000972074,0.004193643],"study_design_scores_gemma":[0.00007723142,0.000016456035,0.000041838328,0.0000027419853,0.000003679206,0.0000075846388,0.000013758716,0.000040546944,0.83967566,0.15463991,0.005389029,0.00009156918],"about_ca_topic_score_codex":0.000056934383,"about_ca_topic_score_gemma":0.0000019650138,"teacher_disagreement_score":0.15976362,"about_ca_system_score_codex":0.000028350752,"about_ca_system_score_gemma":0.000014438227,"threshold_uncertainty_score":0.99612784},"labels":[],"label_agreement":null},{"id":"W4245790279","doi":"10.1007/978-1-4939-2877-4_8","title":"Functional Studies of DNA-Protein Interactions Using FRET Techniques","year":2015,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Biotechnology and Biological Sciences Research Council; Scottish Universities Physics Alliance; Université de Sherbrooke","keywords":"Förster resonance energy transfer; DNA; Nucleic acid; Computational biology; Biophysics; Nanotechnology; Chemistry; Biological system; Biology; Fluorescence; Biochemistry; Physics; Materials science","score_opus":0.0901138831587455,"score_gpt":0.4263260993607204,"score_spread":0.33621221620197494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245790279","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02792454,0.024839975,0.80733615,0.00015109988,0.001106532,0.0008585947,0.00023386648,0.00007220132,0.13747706],"genre_scores_gemma":[0.0042035384,0.0004237892,0.93095785,0.00019538107,0.00050027133,0.0000705574,0.0005132529,0.00015232191,0.06298305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99830127,0.00020864961,0.00055413897,0.0005879739,0.00010997197,0.0002380105],"domain_scores_gemma":[0.99868053,0.000038821745,0.00034214428,0.00056963455,0.0003052315,0.00006365138],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00069869665,0.00038039757,0.0006145024,0.00016978272,0.000031970103,0.0000047615895,0.0002662659,0.00078970415,0.00008841362],"category_scores_gemma":[0.00032499747,0.0003767664,0.00023667997,0.00004538981,0.00046588833,0.0000024775259,0.0004127608,0.0003742417,0.0000028595314],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006318404,0.000023369475,0.000016843345,0.000058729183,0.00028720984,0.000010672908,0.000013938472,0.000006574111,0.98977166,0.0035993732,0.00066211517,0.0054863514],"study_design_scores_gemma":[0.00018603724,0.00015666008,0.0000012941496,0.0001258195,0.000063053,0.000039614373,0.000024201428,0.0000052138435,0.86591953,0.038590312,0.09457081,0.0003174589],"about_ca_topic_score_codex":0.000010477742,"about_ca_topic_score_gemma":0.000006009507,"teacher_disagreement_score":0.12385211,"about_ca_system_score_codex":0.00007767064,"about_ca_system_score_gemma":0.00014481564,"threshold_uncertainty_score":0.99986845},"labels":[],"label_agreement":null},{"id":"W4245877500","doi":"10.1007/978-1-4939-2291-8_6","title":"Modeling and Predicting RNA Three-Dimensional Structures","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Nucleic acid structure; RNA; Computational biology; Representation (politics); Computer science; Base pair; Nucleic acid; Molecular dynamics; Theoretical computer science; Biology; Chemistry; DNA; Computational chemistry; Genetics; Gene","score_opus":0.01806769538175822,"score_gpt":0.3315707572835061,"score_spread":0.31350306190174787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245877500","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36919835,0.0009298002,0.629421,0.000049971663,0.000110937915,0.000096229356,0.0000018446823,0.000009034173,0.00018283587],"genre_scores_gemma":[0.43219092,0.000015662481,0.5673664,0.00028363298,0.0000798688,0.00001931666,0.000013641531,0.000018609353,0.000011891585],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981895,0.00073957804,0.00024377608,0.00048265985,0.00006090929,0.0002835682],"domain_scores_gemma":[0.999486,0.000058256144,0.000053660646,0.00030263865,0.000034549408,0.00006484707],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012375705,0.00017928315,0.00022295375,0.00007478614,0.000063542815,0.0000126119085,0.00016674142,0.0003012204,0.000011764122],"category_scores_gemma":[0.0005872709,0.00016115425,0.000060138755,0.00006137792,0.000077244236,0.0000019562503,0.00019179755,0.00012833123,8.56829e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026111198,0.000008103851,0.00089272717,0.00000768557,0.000020727435,0.0000016498258,0.000008099894,0.0019529827,0.95142007,0.003553032,0.0000018713214,0.04210694],"study_design_scores_gemma":[0.00037958272,0.00019349881,0.00014905487,0.000013427992,0.000013040526,0.000026277277,0.000008151759,0.050104067,0.88113105,0.0671362,0.00060875854,0.0002368674],"about_ca_topic_score_codex":0.000049959603,"about_ca_topic_score_gemma":0.000026526208,"teacher_disagreement_score":0.07028899,"about_ca_system_score_codex":0.000005929827,"about_ca_system_score_gemma":0.000021174354,"threshold_uncertainty_score":0.657168},"labels":[],"label_agreement":null},{"id":"W4245906122","doi":"10.1007/978-1-0716-0581-3","title":"Zika Virus","year":2020,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Mosquito-borne diseases and control","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Zika virus; Virus isolation; Virology; Isolation (microbiology); Biology; Virus classification; Virus; Computational biology; Bioinformatics; Genetics; Genome","score_opus":0.024291566271664768,"score_gpt":0.4131366075578219,"score_spread":0.3888450412861571,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245906122","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000018648918,0.026920931,0.64437723,0.002057131,0.000631207,0.0010105331,0.00009430515,0.000103411956,0.3247866],"genre_scores_gemma":[0.000055942284,0.0007654471,0.74166566,0.021131614,0.0009790054,0.00022009823,0.0008736364,0.00020878193,0.23409979],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976053,0.0006887494,0.00047074197,0.00073608727,0.00011842333,0.0003806995],"domain_scores_gemma":[0.99876636,0.00017307646,0.00015419135,0.00062518666,0.000059421745,0.0002217792],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00045755837,0.0003747905,0.001172991,0.00019646506,0.000019325433,0.000008838917,0.0002507434,0.00076715683,0.00057678344],"category_scores_gemma":[0.0005832748,0.00033695786,0.0005775119,0.00011787657,0.00013737477,0.000006700433,0.00016070227,0.00076293835,0.000099345874],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010283582,0.000244543,0.00022229075,0.00067541935,0.0013664606,0.0046394416,0.000097291675,0.000005274001,0.48750916,0.07511734,0.030996693,0.39809772],"study_design_scores_gemma":[0.0014583304,0.00052981847,0.000064594875,0.00012213798,0.00058103254,0.000038553295,0.000005654342,0.00015506377,0.0039557223,0.0298524,0.96286225,0.00037441848],"about_ca_topic_score_codex":0.000020318434,"about_ca_topic_score_gemma":0.000004199314,"teacher_disagreement_score":0.9318656,"about_ca_system_score_codex":0.00012745099,"about_ca_system_score_gemma":0.00051984173,"threshold_uncertainty_score":0.99990827},"labels":[],"label_agreement":null},{"id":"W4245937247","doi":"10.1007/978-1-4939-2877-4_4","title":"In Cellulo DNA Analysis: LMPCR Footprinting","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin; Footprinting; DNA footprinting; DNA; Biology; Computational biology; Genetics; DNA sequencing; Gene; Transcription factor; DNA-binding protein; Base sequence","score_opus":0.03709766094775155,"score_gpt":0.41187324612757864,"score_spread":0.3747755851798271,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4245937247","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35889733,0.0014891399,0.63688564,0.0001878085,0.00014308206,0.00011113706,0.0000020216103,0.000006375011,0.002277493],"genre_scores_gemma":[0.5733322,0.0000753094,0.4254933,0.0005127061,0.00007813369,0.00009160166,0.00004823272,0.000021133696,0.00034737022],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979498,0.00082471414,0.0003451196,0.00050436397,0.000059189155,0.00031683603],"domain_scores_gemma":[0.99922687,0.000021964825,0.000089740366,0.0005173041,0.00006562583,0.00007850717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015475071,0.00015247423,0.00027602134,0.00029917416,0.000018614272,0.000012026577,0.00027956822,0.00024767304,0.000014618245],"category_scores_gemma":[0.0003326256,0.00015151991,0.00012592043,0.0007125324,0.00008379835,0.00000241425,0.00014580863,0.00014408078,0.0000042833635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025284315,0.000050174316,0.019640438,0.0000032862397,0.000084490646,0.00000980287,0.000054309014,0.00091818057,0.972426,0.0014741817,0.000047736987,0.0052661113],"study_design_scores_gemma":[0.0009964172,0.00018023548,0.0048695235,0.000006014389,0.00007780274,0.000008076576,0.00021248285,0.00085011986,0.9423138,0.0057418738,0.04434592,0.00039774922],"about_ca_topic_score_codex":0.00013423603,"about_ca_topic_score_gemma":0.0001052049,"teacher_disagreement_score":0.21443488,"about_ca_system_score_codex":0.000040012423,"about_ca_system_score_gemma":0.00008631618,"threshold_uncertainty_score":0.6178803},"labels":[],"label_agreement":null},{"id":"W4246230500","doi":"10.1007/978-1-59745-385-1_2","title":"Longitudinal Studies and Determination of Risk","year":2008,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Causal Inference Techniques","field":"Mathematics","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; St. John’s Health Sciences Centre","funders":"","keywords":"Observational study; Confounding; Casual; Selection bias; Computer science; Clinical study design; Risk analysis (engineering); Psychology; Medicine; Statistics; Clinical trial; Mathematics","score_opus":0.23388482166872585,"score_gpt":0.5290002017369217,"score_spread":0.29511538006819593,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246230500","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015137382,0.011314662,0.9770771,0.000007873443,0.000060329472,0.00023326805,0.000014300778,0.00004726257,0.011093786],"genre_scores_gemma":[0.00015065487,0.01256407,0.9859217,0.0000131617935,0.000016421267,0.000022706525,0.0000046408477,0.000038039816,0.0012686499],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9985589,0.00037273552,0.0004967478,0.00034971946,0.00007091396,0.00015098971],"domain_scores_gemma":[0.99731755,0.0016858552,0.00050154334,0.00033205666,0.00014047952,0.000022510065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008950259,0.00026741825,0.0007957324,0.00028413668,0.000023455988,0.0000017069407,0.00013103339,0.00045641966,0.000011571902],"category_scores_gemma":[0.0025799142,0.00024106336,0.00008452143,0.00003292921,0.00052567496,0.000022448203,0.00018952525,0.00038005452,5.9273304e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002213157,0.000018226921,0.0002846904,0.00031790364,0.00010858312,0.00008870139,0.00039004182,3.7271315e-7,0.011843692,0.69278646,0.000021553633,0.29411763],"study_design_scores_gemma":[0.000103445025,0.00014232498,0.000019444291,0.00016704667,0.00007065318,0.000034270153,0.00000991054,0.000009484146,0.02022655,0.9776513,0.0013621704,0.0002033854],"about_ca_topic_score_codex":0.0000038027829,"about_ca_topic_score_gemma":0.000016683098,"teacher_disagreement_score":0.29391423,"about_ca_system_score_codex":0.00005489483,"about_ca_system_score_gemma":0.000018598193,"threshold_uncertainty_score":0.9830278},"labels":[],"label_agreement":null},{"id":"W4246279985","doi":"10.1007/978-1-61779-295-3","title":"Molecular Chaperones","year":2011,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Occupational Cancer Research Centre","funders":"","keywords":"Co-chaperone; Computational biology; Biology; Genetics; Heat shock protein; Gene; Hsp90","score_opus":0.038280241751353805,"score_gpt":0.40542917270153594,"score_spread":0.36714893095018214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246279985","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010944082,0.01235834,0.6489473,0.00011193098,0.00044230663,0.0012610842,0.000057119592,0.000047875266,0.33567965],"genre_scores_gemma":[0.00053412025,0.0012655515,0.74417466,0.0012369099,0.00046246563,0.000647123,0.0012143317,0.00048516347,0.24997967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9941146,0.002163035,0.00076419016,0.0016343106,0.00023738854,0.0010865099],"domain_scores_gemma":[0.9975183,0.00006858604,0.00020899835,0.0017685876,0.00018977802,0.00024575283],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019810633,0.00077430584,0.00092548464,0.0005422679,0.000061887826,0.00002329977,0.0012647802,0.002460593,0.00027458527],"category_scores_gemma":[0.0008528614,0.00079536956,0.0004317099,0.00019949873,0.0005525009,0.0000026517614,0.0011302151,0.0010849889,0.00010454652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008511,0.00006908691,0.00004344698,0.00008367985,0.00018461849,0.00021125471,0.000026303615,0.0000104618275,0.96382946,0.00994457,0.0007707936,0.024741199],"study_design_scores_gemma":[0.00045597815,0.00055973564,0.0000085652,0.000055099994,0.00002997229,0.000048792554,0.00000451866,0.000013722141,0.5870657,0.017724471,0.3933317,0.00070174964],"about_ca_topic_score_codex":0.00004867926,"about_ca_topic_score_gemma":0.000026531936,"teacher_disagreement_score":0.3925609,"about_ca_system_score_codex":0.0001387042,"about_ca_system_score_gemma":0.0008414339,"threshold_uncertainty_score":0.99944973},"labels":[],"label_agreement":null},{"id":"W4246675467","doi":"10.1007/978-1-60327-483-8","title":"Molecular Embryology","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Medical Research Council; Directorate for Biological Sciences; King's College London; University of Dundee; Wellcome Trust; Helsingin Yliopisto; University of California, Irvine; Children's Medical Research","keywords":"Embryology; Biology; Computational biology; Computer science; Anatomy","score_opus":0.013852646677995349,"score_gpt":0.3517013079853034,"score_spread":0.33784866130730806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4246675467","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0075968704,0.020531625,0.65488493,0.0002937621,0.0018429604,0.0011889263,0.000078525685,0.00008065454,0.31350178],"genre_scores_gemma":[0.0009555234,0.0026731985,0.6696018,0.0033988033,0.00048441128,0.0002645468,0.0063851792,0.00029359516,0.31594297],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9955922,0.0013967955,0.00076953403,0.001395147,0.00011939489,0.00072697474],"domain_scores_gemma":[0.9984265,0.00007078294,0.00032787165,0.0009375042,0.00010749864,0.00012986503],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008700165,0.00070811843,0.0008588862,0.0004002943,0.00008116837,0.000008987167,0.000660633,0.00285135,0.000058672653],"category_scores_gemma":[0.00029001603,0.0007431781,0.00037458472,0.00016369513,0.000668126,0.0000023524942,0.0005363209,0.0006438006,0.00006686552],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011065385,0.000059491715,0.00039947117,0.000034985715,0.00027354585,0.00020609522,0.000023621411,0.00007595564,0.9685377,0.0081054475,0.0038494498,0.01832359],"study_design_scores_gemma":[0.00086738495,0.0005039532,0.00022715605,0.00004076978,0.000050946695,0.0003724259,0.0000053860795,0.000016315551,0.40636474,0.020648498,0.5698357,0.0010667052],"about_ca_topic_score_codex":0.000007089195,"about_ca_topic_score_gemma":0.000017059183,"teacher_disagreement_score":0.5659863,"about_ca_system_score_codex":0.00012421532,"about_ca_system_score_gemma":0.0006409415,"threshold_uncertainty_score":0.99950194},"labels":[],"label_agreement":null},{"id":"W4247017725","doi":"10.1007/978-1-4939-2957-3_22","title":"Erratum to: Combining the Optimized Yeast Cytosine Deaminase Protein Fragment Complementation Assay and an In Vitro Cdk1 Targeting Assay to Study the Regulation of the γ-Tubulin Complex","year":2016,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Studies on Chitinases and Chitosanases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal","funders":"","keywords":"Complementation; Protein-fragment complementation assay; Cytosine deaminase; Yeast; Chemistry; In vitro; Molecular biology; Biology; Biochemistry; Mutant; Gene","score_opus":0.028505913326078224,"score_gpt":0.3751877656816067,"score_spread":0.3466818523555285,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4247017725","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65570366,0.0026006945,0.3221832,0.00536791,0.0035324795,0.009274311,0.00042893708,0.000026113377,0.0008826989],"genre_scores_gemma":[0.7535636,0.000093743336,0.24097776,0.0018249769,0.0005759949,0.0012553841,0.00097146933,0.000119023935,0.0006180881],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9912166,0.0064818584,0.0008103627,0.0008017958,0.00023205532,0.00045731768],"domain_scores_gemma":[0.9982822,0.00020677186,0.00044757428,0.00086103426,0.00013058826,0.00007181675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003812361,0.00043470954,0.00062869216,0.00013029102,0.00025229657,0.000035065983,0.00070980866,0.00029299155,0.000014831952],"category_scores_gemma":[0.0012309675,0.00024270192,0.0001337762,0.00035046975,0.00024546828,0.0000036927916,0.000921284,0.00043578434,5.5760694e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033987104,0.00020548089,0.00041854093,0.000022420354,0.00014229657,0.0000031537847,0.00050395064,0.00014994775,0.9880881,0.00006995807,0.0033202458,0.006736085],"study_design_scores_gemma":[0.0042917975,0.0023598636,0.02465586,0.0002862541,0.00021099971,0.000012873759,0.0057593514,0.0008283594,0.9363772,0.0010917305,0.023103071,0.0010226314],"about_ca_topic_score_codex":0.00024979544,"about_ca_topic_score_gemma":0.0004968952,"teacher_disagreement_score":0.09785989,"about_ca_system_score_codex":0.000052542076,"about_ca_system_score_gemma":0.000088738096,"threshold_uncertainty_score":0.98970973},"labels":[],"label_agreement":null},{"id":"W4248511272","doi":"10.1007/978-1-0716-1138-8_8","title":"Longitudinal Studies 3: Data Modeling Using Standard Regression Models and Extensions","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Statistical Methods and Bayesian Inference","field":"Mathematics","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland; University of Calgary","funders":"","keywords":"Longitudinal data; Outcome (game theory); Generalized linear model; Linear regression; Regression analysis; Statistics; Linear model; Generalized linear mixed model; Mixed model; Econometrics; Computer science; Regression; Mathematics; Data mining","score_opus":0.47802350884855266,"score_gpt":0.5590137511763804,"score_spread":0.08099024232782776,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248511272","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00002319185,0.028682452,0.96703076,0.00006878089,0.00029316748,0.00023399053,0.00020282184,0.00002828499,0.0034365456],"genre_scores_gemma":[0.000017496865,0.0048769307,0.99418133,0.00007767526,0.00005902984,0.000007234105,0.00004789826,0.0000735579,0.00065881247],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9964391,0.0011105854,0.0007638896,0.0011441015,0.00018236208,0.00035996735],"domain_scores_gemma":[0.9958757,0.0022335653,0.00025767204,0.0012508559,0.00028655614,0.00009565071],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027286857,0.0004771043,0.0014485174,0.00021838809,0.00011163371,0.000029995977,0.0003694752,0.0005914835,0.00005689158],"category_scores_gemma":[0.00412192,0.00038522435,0.00009096558,0.000057983372,0.00033390312,0.00006240106,0.001592024,0.00071773166,4.632427e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027575981,0.0000110816445,0.0000029015407,0.0002159632,0.0001474965,0.0002702146,0.000050600207,0.000055409997,0.0027397203,0.9205646,0.00001806585,0.075896405],"study_design_scores_gemma":[0.00017659123,0.00005106322,1.069201e-7,0.0010977442,0.00023271727,0.00007073831,0.000033304605,0.13423045,0.00018712218,0.8632108,0.0003546399,0.00035473506],"about_ca_topic_score_codex":0.000008802197,"about_ca_topic_score_gemma":0.000009845436,"teacher_disagreement_score":0.13417503,"about_ca_system_score_codex":0.00008346515,"about_ca_system_score_gemma":0.00013098562,"threshold_uncertainty_score":0.99986},"labels":[],"label_agreement":null},{"id":"W4248729347","doi":"10.1007/978-1-59745-457-5_11","title":"Recombinant Protein Production in Large-Scale Agitated Bioreactors Using the Baculovirus Expression Vector System","year":2007,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Biotechnology Research Institute","funders":"","keywords":"Bioreactor; Recombinant DNA; Biology; Biotechnology; Biochemical engineering; Engineering; Biochemistry; Botany","score_opus":0.031558819374899814,"score_gpt":0.3624432734896238,"score_spread":0.330884454114724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248729347","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32978567,0.01813228,0.5974138,0.00023328578,0.008856304,0.008024658,0.00025102153,0.00022470701,0.037078254],"genre_scores_gemma":[0.357756,0.0015442685,0.5795704,0.0012726026,0.0030250705,0.0013643057,0.0025057679,0.0013040522,0.051657513],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99620116,0.0010197548,0.00081652147,0.00117163,0.00016819601,0.000622732],"domain_scores_gemma":[0.99826723,0.00003468177,0.0004726,0.00097264454,0.00014407736,0.00010876226],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017872289,0.0005828272,0.00061526947,0.0003716619,0.00013736764,0.000027882375,0.0004074327,0.0012665746,0.00003664549],"category_scores_gemma":[0.00028480557,0.00044367154,0.0003116543,0.00017100421,0.00021310929,0.000005917739,0.00037411886,0.0006780749,0.000006920614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019353413,0.0000867415,0.00021568048,0.00010042911,0.00005180155,0.00004356201,0.00004525768,0.00008812934,0.9964116,0.00082370767,0.000110279245,0.0018292484],"study_design_scores_gemma":[0.0006994045,0.0003621424,0.000071255476,0.0007114894,0.00004896315,0.000055967605,0.00010150489,0.00010646682,0.9675075,0.001726641,0.027902855,0.0007058479],"about_ca_topic_score_codex":0.000098630044,"about_ca_topic_score_gemma":0.00010553741,"teacher_disagreement_score":0.028904166,"about_ca_system_score_codex":0.00019168406,"about_ca_system_score_gemma":0.00014381392,"threshold_uncertainty_score":0.9998015},"labels":[],"label_agreement":null},{"id":"W4248943796","doi":"10.1007/978-1-0716-1138-8_1","title":"On Framing the Research Question and Choosing the Appropriate Research Design","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Psychometric Methodologies and Testing","field":"Decision Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Memorial University of Newfoundland","funders":"","keywords":"Clinical study design; Randomized controlled trial; Psychological intervention; Internal validity; Framing (construction); Research design; Medicine; Relevance (law); Epidemiology; Clinical trial; Management science; Psychology; Intensive care medicine; Medical physics; Statistics; Surgery; Mathematics; Pathology; Engineering; Political science; Nursing","score_opus":0.7902741427521535,"score_gpt":0.6562047129254822,"score_spread":0.13406942982667125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4248943796","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00023424682,0.010645189,0.903674,0.0021446997,0.00066502887,0.00073943095,0.0000027578565,0.000019220297,0.08187542],"genre_scores_gemma":[0.0004639656,0.00095405534,0.97325563,0.00039892163,0.00022081313,0.000081267404,0.0000034681932,0.00005534935,0.02456653],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.92370886,0.07093185,0.0010355262,0.0016584268,0.0017595593,0.0009057786],"domain_scores_gemma":[0.72324926,0.27371508,0.00030461463,0.0017603388,0.0008895798,0.000081126964],"candidate_categories":["metaresearch","research_integrity"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.2746484,0.00030851236,0.0006886028,0.001822406,0.00081850606,0.0004335714,0.0019786677,0.0008202389,0.00012364113],"category_scores_gemma":[0.3708522,0.00015641675,0.00014628583,0.0018434359,0.0016524722,0.00003094843,0.0014398235,0.0042584897,0.000026025631],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003923127,0.000009436767,0.00003865394,0.0000064710152,0.00002670988,0.000053276104,0.00017835667,0.00008280208,0.008881117,0.41571864,0.00023946812,0.57472587],"study_design_scores_gemma":[0.00012712675,0.00022952595,0.00016405476,0.00015240679,0.000008092535,0.000031010397,0.0003078064,0.0009899404,0.0014753226,0.9660088,0.030332392,0.00017353173],"about_ca_topic_score_codex":0.00008863975,"about_ca_topic_score_gemma":0.000007676261,"teacher_disagreement_score":0.5745523,"about_ca_system_score_codex":0.00012710843,"about_ca_system_score_gemma":0.00021626432,"threshold_uncertainty_score":0.9980387},"labels":[],"label_agreement":null},{"id":"W4249135818","doi":"10.1007/978-1-4939-9597-4","title":"Immunoproteomics","year":2019,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Antigen; Major histocompatibility complex; Computational biology; Immune system; Biology; Phage display; Genome; Genetics; Antibody; Gene","score_opus":0.014931366579556233,"score_gpt":0.3919429442967447,"score_spread":0.37701157771718846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249135818","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00017957421,0.0019851762,0.927759,0.0000877379,0.00023460292,0.00071111304,0.00004682578,0.0000388076,0.068957165],"genre_scores_gemma":[0.00004061264,0.00048638563,0.81781906,0.00048213708,0.00013484253,0.0000762502,0.0008497351,0.00009444222,0.18001656],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99805695,0.0002915793,0.0004146103,0.00081560935,0.000059190523,0.00036204892],"domain_scores_gemma":[0.99844444,0.000036789846,0.00023068106,0.0011672929,0.00007470054,0.00004611684],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005438957,0.000381568,0.00046870633,0.00014200203,0.000033047,0.000011156449,0.0004816734,0.0012582976,0.000015624268],"category_scores_gemma":[0.00013164671,0.0003920995,0.00022017275,0.000082983366,0.00019567146,9.0956917e-7,0.00040986808,0.00048337862,0.000025980014],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022043345,0.000020545582,0.000017035361,0.000020922544,0.000042147447,0.0000037031143,0.000003854901,0.000012851527,0.9746522,0.011257941,0.001887263,0.012059513],"study_design_scores_gemma":[0.00019395782,0.0001722477,0.0000047095837,0.00003324233,0.00001677882,0.000020389229,0.000001515728,0.000018130606,0.3134165,0.041503582,0.6442222,0.00039673937],"about_ca_topic_score_codex":0.0000050808458,"about_ca_topic_score_gemma":0.0000031434674,"teacher_disagreement_score":0.66123563,"about_ca_system_score_codex":0.000078204626,"about_ca_system_score_gemma":0.0002447412,"threshold_uncertainty_score":0.9998531},"labels":[],"label_agreement":null},{"id":"W4249424100","doi":"10.1007/978-1-4939-9167-9_5","title":"Quantification and Visualization of Neutrophil Extracellular Traps (NETs) from Murine Bone Marrow-Derived Neutrophils","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Neutrophil extracellular traps; Bone marrow; Extracellular; Cell biology; Inflammation; In vitro; Chromatin; Chemistry; Immunology; Biology; Microbiology; Biochemistry; DNA","score_opus":0.019173503750283916,"score_gpt":0.32370312398340345,"score_spread":0.3045296202331195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249424100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6987023,0.005587136,0.29462615,0.0001660554,0.00038327617,0.00040467805,0.000029675104,0.000031093,0.000069665264],"genre_scores_gemma":[0.91275585,0.00041055767,0.08587428,0.00020692332,0.00001874526,0.00004083347,0.0004897571,0.00004404892,0.00015901773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99592024,0.0022760166,0.000670458,0.0007219658,0.00003771484,0.000373599],"domain_scores_gemma":[0.9987523,0.00027595946,0.00031242656,0.0005371239,0.000090075795,0.000032108157],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008063909,0.00030243036,0.00071337324,0.00033749518,0.0000515323,0.000009467333,0.00023819879,0.00047680712,0.00042323675],"category_scores_gemma":[0.0001064398,0.00028494064,0.000107830805,0.00030490046,0.0002739675,0.00006481044,0.00013413391,0.00028839876,0.000056327375],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019963739,0.00012457636,0.0017512804,0.000026391028,0.00008992261,0.000011937611,0.00014785214,0.00002021299,0.96167016,0.028193455,0.0000053124472,0.0077592577],"study_design_scores_gemma":[0.001678163,0.00040481018,0.004703522,0.000035333745,0.000046547848,0.000018915835,0.00008052402,0.00006921045,0.9822591,0.007984841,0.0024432798,0.00027576566],"about_ca_topic_score_codex":0.0001480827,"about_ca_topic_score_gemma":0.000007373295,"teacher_disagreement_score":0.21405357,"about_ca_system_score_codex":0.000026978181,"about_ca_system_score_gemma":0.00003187651,"threshold_uncertainty_score":0.9999603},"labels":[],"label_agreement":null},{"id":"W4249528279","doi":"10.1007/978-1-59745-396-7_12","title":"Derivation and Characterization of Murine Alternatively Activated (M2) Macrophages","year":2009,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Terry Fox Research Institute","funders":"","keywords":"Characterization (materials science); Cell biology; Materials science; Chemistry; Biology; Nanotechnology","score_opus":0.016836299249727824,"score_gpt":0.330627395653358,"score_spread":0.3137910964036302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249528279","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1455356,0.036416635,0.698962,0.0007753273,0.004824137,0.003146961,0.00043893635,0.00025228848,0.10964815],"genre_scores_gemma":[0.047977157,0.016233837,0.52044684,0.002121915,0.00024209128,0.00016227883,0.006459716,0.00050014403,0.405856],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99802244,0.0006024681,0.00058430486,0.0005074614,0.000026298343,0.00025704317],"domain_scores_gemma":[0.9988079,0.00016693384,0.00056149915,0.0003427821,0.000108850356,0.00001203265],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005078979,0.00035587055,0.00073174905,0.00039014936,0.000035136836,0.0000047566664,0.00023679598,0.000998651,0.00037524052],"category_scores_gemma":[0.00011363424,0.00035546953,0.00008980809,0.00006164267,0.00041832126,0.000031303727,0.00015674948,0.0005517042,0.000011855214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010090506,0.000020513486,0.000032346572,0.00003517351,0.00015220682,0.000009426229,0.00006297936,8.0061415e-7,0.8437919,0.010760324,0.0000049770774,0.14502847],"study_design_scores_gemma":[0.0007762201,0.00022915567,0.00081742177,0.00011974807,0.0000491213,0.000030520576,0.0000026989421,0.0000019131185,0.9475882,0.011496564,0.038603213,0.00028520043],"about_ca_topic_score_codex":0.000020335581,"about_ca_topic_score_gemma":0.0000016042521,"teacher_disagreement_score":0.29620788,"about_ca_system_score_codex":0.000069802794,"about_ca_system_score_gemma":0.00004638896,"threshold_uncertainty_score":0.99988973},"labels":[],"label_agreement":null},{"id":"W4249951710","doi":"10.1007/978-1-4939-7828-1_7","title":"Exploring the Diagnostic Potential of Immune Biomarker Co-expression in Gulf War Illness","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fibromyalgia and Chronic Fatigue Syndrome Research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases; National Institute of Arthritis and Musculoskeletal and Skin Diseases; National Institute on Alcohol Abuse and Alcoholism; World Health Organization","keywords":"Biomarker; Immune system; Gulf war; Medicine; Expression (computer science); Internal medicine; Immunology; Biology; Genetics; Computer science","score_opus":0.06435459207504644,"score_gpt":0.4169396713670913,"score_spread":0.35258507929204486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4249951710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7896737,0.0017965947,0.20725988,0.00034180816,0.00030082808,0.00038166242,0.0000026463115,0.000011447836,0.00023142496],"genre_scores_gemma":[0.8995698,0.0003904709,0.09981428,0.000015381018,0.000026337919,0.0001138451,0.000018272342,0.000024016294,0.000027609925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997118,0.001566206,0.00044735137,0.00030675053,0.00015500981,0.0004066906],"domain_scores_gemma":[0.99861157,0.00068203267,0.00007442805,0.00051026256,0.000070788636,0.000050942934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020917635,0.00014146998,0.00039433132,0.0002875286,0.00004706198,0.0000032018436,0.00025064746,0.00014352868,0.00015882935],"category_scores_gemma":[0.001918992,0.00009425525,0.00010421722,0.00046442205,0.00058145,0.000029905927,0.0001764749,0.0003068625,0.000011370071],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014486443,0.00008997716,0.0033064252,0.00018837444,0.000030312756,0.00010478606,0.00031759837,0.000006220318,0.9755616,0.0001121092,0.000013645346,0.020124082],"study_design_scores_gemma":[0.0014057204,0.00048823218,0.06588585,0.0005064596,0.000018660618,0.000068915135,0.0003093625,0.00039473613,0.9294727,0.000993651,0.0003243877,0.00013134912],"about_ca_topic_score_codex":0.00015053975,"about_ca_topic_score_gemma":0.0000017303691,"teacher_disagreement_score":0.10989608,"about_ca_system_score_codex":0.00006338804,"about_ca_system_score_gemma":0.00009289129,"threshold_uncertainty_score":0.38436174},"labels":[],"label_agreement":null},{"id":"W4250006319","doi":"10.1007/978-1-62703-589-7_16","title":"Profiling of Cytokine and Chemokine Responses Using Multiplex Bead Array Technology","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Multiplex; Chemokine; Cytokine; Bronchoalveolar lavage; Bead; In vivo; Molecular biology; Biology; Immunology; Immune system; Chemistry; Medicine; Materials science; Bioinformatics; Biotechnology","score_opus":0.02520641422727537,"score_gpt":0.40420804242350117,"score_spread":0.3790016281962258,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250006319","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45009398,0.000417797,0.5490059,0.00015221046,0.000016045251,0.00025104414,0.0000068604136,0.000016959528,0.00003917167],"genre_scores_gemma":[0.30884555,0.00006505016,0.6908872,0.0000906558,0.0000169083,0.00004542175,0.000019747655,0.00001700509,0.00001242932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874794,0.00021982205,0.0003217696,0.0004235739,0.00003453401,0.0002523549],"domain_scores_gemma":[0.99924284,0.000044054763,0.00014025714,0.00042686018,0.00010825231,0.000037703914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00036999118,0.00016761187,0.00026601303,0.00018732113,0.00003805156,0.0000050550957,0.00016585908,0.000339598,0.0000036724896],"category_scores_gemma":[0.00047479186,0.00015727656,0.000048778238,0.00027014207,0.00037114145,0.0000027445587,0.0001786821,0.00013947196,4.2569675e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024127885,0.000031567677,0.0042887065,0.000011571645,0.000015255208,0.0000010661463,0.000004737028,0.000013658759,0.9845918,0.0010725925,0.0000025288698,0.009942395],"study_design_scores_gemma":[0.00026410876,0.00015225552,0.00029522734,0.000014667799,0.0000088797315,0.000037489594,0.000033216736,0.00030601778,0.9900682,0.0075518447,0.0011042537,0.00016385085],"about_ca_topic_score_codex":0.000032331947,"about_ca_topic_score_gemma":0.0000029433468,"teacher_disagreement_score":0.14188132,"about_ca_system_score_codex":0.000012073338,"about_ca_system_score_gemma":0.000029710378,"threshold_uncertainty_score":0.64135516},"labels":[],"label_agreement":null},{"id":"W4250052723","doi":"10.1007/978-1-60761-646-7_19","title":"Plant Transgenesis","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Epigenetics; Biology; Gene silencing; Transgene; Arabidopsis; Agrobacterium; Genetics; Transformation (genetics); Gene; Genetically modified crops; Computational biology; Mutant","score_opus":0.017042826835163626,"score_gpt":0.3527924415370615,"score_spread":0.3357496147018979,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250052723","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33255,0.0010579608,0.6641333,0.00029569757,0.0005620132,0.0001483107,0.000025518992,0.000014843279,0.0012123538],"genre_scores_gemma":[0.1719624,0.00017065067,0.8252128,0.0007571896,0.0003507701,0.000066423774,0.0006514312,0.00003263232,0.00079571473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989255,0.00029145522,0.00018080474,0.00034626707,0.000035256573,0.00022073495],"domain_scores_gemma":[0.9995731,0.00001712287,0.000038097172,0.00029382115,0.000025520258,0.000052333748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004597177,0.00013702964,0.0001539019,0.00006179378,0.00003695637,0.000007770866,0.00019371037,0.00036471637,0.000029471621],"category_scores_gemma":[0.00013424091,0.0001148128,0.00007181525,0.00008778155,0.00008585073,0.0000012465852,0.00003860196,0.00017071063,0.00000546578],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020702495,0.00002677854,0.0010793963,0.000003595933,0.000018187082,0.000009754819,0.000021368485,0.000014475047,0.98765785,0.0017500583,0.0001956959,0.009202147],"study_design_scores_gemma":[0.00021180503,0.00006907648,0.00024280812,0.0000016161956,0.0000072142952,0.000055005286,0.000005954235,0.00003455613,0.8175705,0.00031583628,0.18134964,0.00013601371],"about_ca_topic_score_codex":0.00007425147,"about_ca_topic_score_gemma":0.0009951567,"teacher_disagreement_score":0.18115394,"about_ca_system_score_codex":0.000004008186,"about_ca_system_score_gemma":0.000052330375,"threshold_uncertainty_score":0.46819302},"labels":[],"label_agreement":null},{"id":"W4250168311","doi":"10.1007/978-1-61779-585-5","title":"Evolutionary Genomics","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Philosophy and History of Science","field":"Arts and Humanities","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"U.S. National Library of Medicine; National Institutes of Health; University of Toronto; Eidgenössische Technische Hochschule Zürich; Wageningen University and Research; Stockholms Universitet; Wellcome Trust; Centre National de la Recherche Scientifique; Aarhus Universitet; Princeton University","keywords":"Genomics; Population genomics; Evolutionary biology; Population genetics; Population; Biology; Sociology; Genetics; Genome; Demography; Gene","score_opus":0.07539914054458548,"score_gpt":0.34480569347475254,"score_spread":0.2694065529301671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250168311","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000004807481,0.010341329,0.028694613,0.00014466929,0.002111057,0.00013717722,0.00004768344,0.000032656564,0.958486],"genre_scores_gemma":[0.000032926382,0.00010048171,0.35203755,0.0011775343,0.0015220252,0.00003169634,0.00011536857,0.000043896664,0.6449385],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9986212,0.00036615683,0.00028016165,0.0003460657,0.000069484246,0.0003169059],"domain_scores_gemma":[0.9993377,0.0001105923,0.00013998181,0.0003084965,0.000042331423,0.00006090946],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00075717585,0.00021930251,0.00035794833,0.00027273802,0.00014421546,0.000014939739,0.0004120092,0.00029469188,0.0013888823],"category_scores_gemma":[0.000049377173,0.00021464143,0.00013967534,0.000017407958,0.0012376849,0.000046663576,0.00012851425,0.00043376992,0.00017035451],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000053831577,0.000021650143,0.0000019683685,0.000018546069,0.000018125342,0.0000101240485,0.0014451391,0.0000013025576,0.002919437,0.98576534,0.0042683757,0.005524596],"study_design_scores_gemma":[0.00004373177,0.000034215074,0.000001320695,0.000010543088,0.000013163288,0.0000036055803,0.000012183883,0.0000045037723,0.000037832593,0.36650226,0.63317245,0.00016415943],"about_ca_topic_score_codex":0.00002128949,"about_ca_topic_score_gemma":0.000025597741,"teacher_disagreement_score":0.6289041,"about_ca_system_score_codex":0.00029456808,"about_ca_system_score_gemma":0.00020622318,"threshold_uncertainty_score":0.999524},"labels":[],"label_agreement":null},{"id":"W4250349490","doi":"10.1007/978-1-4939-6536-6","title":"Campylobacter jejuni","year":2016,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Campylobacter jejuni; Campylobacter; Microbiology; Campylobacter coli; Medicine; Biology; Bacteria","score_opus":0.03661211950955088,"score_gpt":0.3600861349523995,"score_spread":0.3234740154428486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250349490","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.007039528,0.007300227,0.05032246,0.0042231395,0.0032937534,0.0013744496,0.00047441418,0.00035466612,0.92561734],"genre_scores_gemma":[0.00039569012,0.0014858759,0.20418422,0.009052824,0.0025844849,0.00025228824,0.0015299352,0.000031358202,0.7804833],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99495876,0.0024066851,0.00071105565,0.0010304762,0.00009770635,0.00079530536],"domain_scores_gemma":[0.99742776,0.0017605782,0.00032557172,0.00026803598,0.000070185684,0.00014785671],"candidate_categories":["research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0017258743,0.00053720677,0.0010628592,0.00007332765,0.00005625995,0.000016611544,0.0008076486,0.0016544292,0.0022257643],"category_scores_gemma":[0.000442015,0.00018993091,0.0003857806,0.00016625025,0.0003073731,0.000025857269,0.00033820217,0.0005930476,0.00023551793],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037332564,0.00004683537,0.0016280648,0.0000118583785,0.00006899041,0.0000799394,0.000011827921,1.9869636e-7,0.62376815,0.018642453,0.004383876,0.3513205],"study_design_scores_gemma":[0.00016558688,0.00027226334,0.0011499744,0.000065828,0.000026079582,0.000032652395,0.000004155485,0.0000014745806,0.0030621237,0.19667666,0.79800075,0.0005424477],"about_ca_topic_score_codex":0.00005394418,"about_ca_topic_score_gemma":0.00011148184,"teacher_disagreement_score":0.7936169,"about_ca_system_score_codex":0.00016727156,"about_ca_system_score_gemma":0.00005451096,"threshold_uncertainty_score":0.99964166},"labels":[],"label_agreement":null},{"id":"W4250447984","doi":"10.1007/978-1-60327-015-1_31","title":"The Cruciform DNA Mobility Shift Assay: A Tool to Study Proteins that Recognize Bent DNA","year":2009,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hôtel-Dieu de Québec","funders":"","keywords":"Cruciform; Electrophoretic mobility shift assay; DNA; DNA-binding protein; HMG-box; Bent molecular geometry; DNA binding site; Molecular biology; Biophysics; Biology; Computational biology; Chemistry; Genetics; Gene; Transcription factor; Materials science; Promoter; Gene expression","score_opus":0.021264704608142334,"score_gpt":0.33124811241064006,"score_spread":0.3099834078024977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250447984","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23044933,0.005829532,0.6427246,0.0017060479,0.001910883,0.015708435,0.00042858647,0.00012735938,0.101115264],"genre_scores_gemma":[0.057361107,0.0012460991,0.897112,0.003172177,0.0006467702,0.0016243473,0.0008556844,0.00050476944,0.037477057],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99578565,0.0009275423,0.000911046,0.0014366931,0.00021383913,0.0007252339],"domain_scores_gemma":[0.99730223,0.00012586088,0.00039853156,0.0018928078,0.00012671543,0.00015387365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0038860023,0.0007586327,0.0008163028,0.00014937435,0.00022045792,0.000073642,0.0010807003,0.0010906957,0.000041583222],"category_scores_gemma":[0.0005266472,0.00061383226,0.00041280428,0.000080870195,0.00021219345,0.0000023117125,0.0008336572,0.0006370045,0.00001839004],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00044918107,0.00059375295,0.0004351225,0.00005494179,0.0008239123,0.000100580764,0.00029690412,0.00006236828,0.47940877,0.011747717,0.00013069152,0.50589603],"study_design_scores_gemma":[0.0033261578,0.008795067,0.0038234452,0.0001715741,0.00044161186,0.00009224604,0.000276545,0.0001759604,0.205576,0.33158985,0.4416406,0.0040909527],"about_ca_topic_score_codex":0.000027270158,"about_ca_topic_score_gemma":0.0003378205,"teacher_disagreement_score":0.50180507,"about_ca_system_score_codex":0.00013805668,"about_ca_system_score_gemma":0.00019352592,"threshold_uncertainty_score":0.9996313},"labels":[],"label_agreement":null},{"id":"W4250638196","doi":"10.1007/978-1-60761-380-0","title":"Epidermal Cells","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, University of California, Irvine; Centro de Investigaciones Energéticas, Medioambientales y Tecnológicas; Feinberg School of Medicine; Université de Namur; University of California, San Francisco; University of California, San Diego; Lawson Health Research Institute; Technische Universiteit Eindhoven; Universität zu Köln; Glasgow Caledonian University; Université Laval; University of Connecticut; University of Texas MD Anderson Cancer Center; Northwestern University; Office of International Science and Engineering; University of California, Irvine; University of Wisconsin-Madison; National Institutes of Health; National Science Foundation","keywords":"Biology","score_opus":0.013016050943124826,"score_gpt":0.3452322563280522,"score_spread":0.3322162053849274,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250638196","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00020067501,0.00734361,0.8172787,0.00010829895,0.0005537668,0.0005531595,0.00005215454,0.00002831276,0.17388135],"genre_scores_gemma":[0.000023762015,0.0013949146,0.75129247,0.0029561608,0.00047715296,0.00004750936,0.0012318752,0.00013117364,0.24244499],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966573,0.0009500574,0.00062095583,0.0010572806,0.00008550698,0.0006288895],"domain_scores_gemma":[0.9985139,0.00005924582,0.0002532579,0.0009846987,0.00007479231,0.00011413565],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009468468,0.00057350704,0.0007348635,0.00024282749,0.000039364983,0.000017111586,0.00063879736,0.0018990755,0.00005555225],"category_scores_gemma":[0.00015932255,0.00060058647,0.00039394494,0.00008751195,0.00020406139,0.0000013135442,0.00031967778,0.0006227629,0.00003466538],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030876316,0.000047297497,0.0000125315555,0.000030386738,0.000086470835,0.000052462707,0.000008583985,0.000045235287,0.9627571,0.002816604,0.009828004,0.024284462],"study_design_scores_gemma":[0.00035093378,0.00028145828,0.0000048719403,0.000033269767,0.00004198525,0.000032439933,0.0000020147565,0.00002381015,0.38432166,0.009628611,0.60474855,0.00053038896],"about_ca_topic_score_codex":0.000011796046,"about_ca_topic_score_gemma":0.000026668817,"teacher_disagreement_score":0.5949205,"about_ca_system_score_codex":0.00007888348,"about_ca_system_score_gemma":0.00035671826,"threshold_uncertainty_score":0.9996446},"labels":[],"label_agreement":null},{"id":"W4250788264","doi":"10.1007/978-1-4939-2428-8_18","title":"Qualitative Research in Clinical Epidemiology","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Geriatric Care and Nursing Homes","field":"Health Professions","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Janeway Children's Health and Rehabilitation Centre; Memorial University of Newfoundland","funders":"","keywords":"Grounded theory; Qualitative research; Hemodialysis; Epidemiology; Perception; Clinical Practice; Disease; Qualitative property; Clinical epidemiology; Scale (ratio); Medicine; Psychology; Computer science; Family medicine; Internal medicine; Sociology; Geography; Social science","score_opus":0.7927234969552677,"score_gpt":0.8024218551729987,"score_spread":0.009698358217731018,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4250788264","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23573937,0.004591783,0.7200518,0.014260421,0.0048532523,0.0011444505,0.000008221437,0.00005984028,0.019290844],"genre_scores_gemma":[0.034645222,0.000121893274,0.96283543,0.0014382199,0.00027771413,0.00022119723,0.000025360234,0.00002551268,0.0004094225],"study_design_codex":"observational","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.81916624,0.17800017,0.0013759969,0.00049957476,0.00008595279,0.00087207893],"domain_scores_gemma":[0.9659575,0.03297225,0.00019468772,0.00044397629,0.00024947897,0.00018208775],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.14215153,0.00012536398,0.00086673436,0.0005530979,0.000075609474,0.0000012174922,0.0002926328,0.0008261819,0.00004652439],"category_scores_gemma":[0.046689063,0.00010652515,0.00009421206,0.00085927255,0.00047317488,0.00001783433,0.00025194208,0.0021252441,0.00013069253],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010964925,0.00046388147,0.50302345,0.00013149313,0.0000678694,0.00019158333,0.08647644,0.00002224331,0.0056325416,0.21706232,0.01721999,0.16861168],"study_design_scores_gemma":[0.0024205598,0.00077846146,0.018449882,0.00009205303,0.000007066034,0.0000034740397,0.05145825,0.00009655962,0.0001447088,0.8775301,0.048788086,0.00023079348],"about_ca_topic_score_codex":0.001841314,"about_ca_topic_score_gemma":0.00029945964,"teacher_disagreement_score":0.6604678,"about_ca_system_score_codex":0.00024529235,"about_ca_system_score_gemma":0.00050371955,"threshold_uncertainty_score":0.9613411},"labels":[],"label_agreement":null},{"id":"W4251188060","doi":"10.1007/978-1-4939-8805-1","title":"Brain Tumor Stem Cells","year":2018,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Stem cell; Cancer stem cell; Brain tumor; Brain cancer; Neuroscience; Tumor cells; Biology; Cancer; Computational biology; Cancer research; Pathology; Medicine; Cell biology; Genetics","score_opus":0.025446803287912684,"score_gpt":0.3773393252590925,"score_spread":0.3518925219711798,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251188060","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011817167,0.007989057,0.76464814,0.00033377166,0.0016989261,0.0016592195,0.00022605355,0.00006399803,0.22219913],"genre_scores_gemma":[0.000026386468,0.00028813066,0.35463634,0.0018970916,0.0006763158,0.00013735278,0.0005423585,0.00024239217,0.64155364],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99353635,0.0028458005,0.00074228283,0.001635564,0.0002418322,0.0009981869],"domain_scores_gemma":[0.99754465,0.00022146793,0.0003116188,0.0015269575,0.0001864642,0.00020887512],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0029519098,0.00068869075,0.0008655315,0.00042825966,0.000066713066,0.000032632557,0.0012561239,0.0015152321,0.00017028509],"category_scores_gemma":[0.00026647418,0.0006940161,0.00039759136,0.00018109595,0.0006399187,0.0000019572187,0.0011022497,0.0007883999,0.0002197019],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000842441,0.000046080924,0.000024210542,0.000098571145,0.00014154713,0.00014883533,0.000011526679,0.000008302443,0.9507489,0.0005898278,0.041677404,0.0064205215],"study_design_scores_gemma":[0.00038016215,0.00043038465,0.0000018736841,0.000043850512,0.000017684433,0.000035429464,0.00000426761,0.000023508981,0.48187494,0.0026024333,0.51413506,0.00045039432],"about_ca_topic_score_codex":0.000011940997,"about_ca_topic_score_gemma":0.00002214066,"teacher_disagreement_score":0.47245768,"about_ca_system_score_codex":0.00016102896,"about_ca_system_score_gemma":0.0006997483,"threshold_uncertainty_score":0.999781},"labels":[],"label_agreement":null},{"id":"W4251767490","doi":"10.1007/978-1-59745-561-9_31","title":"Oncolytic Viral Therapy Using Reovirus","year":2009,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Oncolytic virus; Immune system; Cancer research; Biology; Cancer; Cancer cell; Erlotinib; Virology; Immunology; Epidermal growth factor receptor","score_opus":0.06369505551169645,"score_gpt":0.44241563255035593,"score_spread":0.37872057703865947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251767490","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0440169,0.09798332,0.48251376,0.0005496702,0.0016905314,0.004571907,0.00020302896,0.00017418253,0.3682967],"genre_scores_gemma":[0.001624821,0.01171711,0.8310724,0.0065279626,0.0014770158,0.00012130544,0.00080764946,0.0007254466,0.14592628],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958934,0.0011524664,0.00068105134,0.0012673154,0.00022099806,0.0007847532],"domain_scores_gemma":[0.9980219,0.00006944578,0.00027955777,0.0013377747,0.00013384705,0.00015749593],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0017832277,0.00072174193,0.0008576081,0.0004467971,0.00008185642,0.00002936628,0.00082008465,0.0016960462,0.00021092007],"category_scores_gemma":[0.00015262913,0.0007251718,0.0004506074,0.00009688095,0.0003943469,0.0000026564583,0.00027593627,0.00084833405,0.000028452923],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011235548,0.000042715026,0.0000111256495,0.000009083085,0.00016478347,0.00007808757,0.000010759091,0.0000772768,0.82937753,0.0018285849,0.00005715944,0.16721936],"study_design_scores_gemma":[0.0015038515,0.0057683103,0.000005685773,0.00005702646,0.00003733668,0.00006129183,0.0000035415017,0.000107497675,0.73020285,0.03633055,0.22491907,0.0010030047],"about_ca_topic_score_codex":0.00002665263,"about_ca_topic_score_gemma":0.000045401517,"teacher_disagreement_score":0.34855866,"about_ca_system_score_codex":0.00015988875,"about_ca_system_score_gemma":0.00045375442,"threshold_uncertainty_score":0.99959993},"labels":[],"label_agreement":null},{"id":"W4251862768","doi":"10.1007/978-1-0716-1138-8_22","title":"Evidence-Based Decision-Making 2: Systematic Reviews and Meta-Analysis","year":2021,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Meta-analysis and systematic reviews","field":"Decision Sciences","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; University of Calgary; University of Alberta","funders":"","keywords":"Systematic review; Clinical trial; Management science; Computer science; Reading (process); Clinical study design; Evidence-based medicine; Clinical decision making; Data science; Medicine; Alternative medicine; MEDLINE; Intensive care medicine; Pathology; Political science; Engineering","score_opus":0.8941642158451708,"score_gpt":0.6844748309018657,"score_spread":0.20968938494330513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251862768","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[6.6423624e-8,0.5066439,0.49023077,0.00004253342,0.00013035582,0.0028449073,0.00001588833,0.0000037023765,0.00008789005],"genre_scores_gemma":[4.5184902e-7,0.5181331,0.4799754,0.00036107414,0.000015830869,0.0011935522,0.000013008277,0.000029340763,0.00027820253],"study_design_codex":"design_other","study_design_gemma":"meta_analysis","domain_scores_codex":[0.56360495,0.39449894,0.03422414,0.0042001833,0.0028185255,0.0006532693],"domain_scores_gemma":[0.7542283,0.20425303,0.025260514,0.014643392,0.0013196294,0.0002951266],"candidate_categories":["metaresearch","metaepi_narrow","metaepi_broad","scholarly_communication","insufficient_payload"],"consensus_categories":["metaresearch","metaepi_narrow","metaepi_broad"],"category_scores_codex":[0.5045003,0.0016744153,0.096641466,0.00444761,0.0001337865,0.0011220839,0.004697182,0.001025692,0.010091796],"category_scores_gemma":[0.5264089,0.0007039081,0.044690415,0.01329798,0.0002051937,0.00012805598,0.0008829,0.00086028525,0.0005164488],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000013646952,0.00004317336,0.0000142782965,0.070886396,0.11192636,0.000119754826,0.00003405053,0.000050127903,0.000003540604,0.0016181285,0.00035007548,0.81495273],"study_design_scores_gemma":[0.000031642507,0.000022014992,3.6645807e-7,0.014827338,0.57155836,0.00003888456,0.00001762874,0.0005550442,7.5412686e-7,0.0031278785,0.40929464,0.0005254443],"about_ca_topic_score_codex":0.000007442691,"about_ca_topic_score_gemma":0.000025473135,"teacher_disagreement_score":0.8144273,"about_ca_system_score_codex":0.00013443957,"about_ca_system_score_gemma":0.00034152038,"threshold_uncertainty_score":0.9999148},"labels":[],"label_agreement":null},{"id":"W4251964210","doi":"10.1007/978-1-60761-823-2_16","title":"Methods for the Isolation of Genes Encoding Novel PHB Cycle Enzymes from Complex Microbial Communities","year":2010,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Gene; Metagenomics; Biology; Computational biology; Function (biology); Genetics; Isolation (microbiology); Identification (biology); Sinorhizobium meliloti; Phenotype; Bioinformatics; Mutant","score_opus":0.10552237509372041,"score_gpt":0.3814381933860573,"score_spread":0.27591581829233686,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251964210","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00031841447,0.03416877,0.96051687,0.00017791263,0.000987659,0.00036912254,0.00040828405,0.000024767422,0.0030282133],"genre_scores_gemma":[0.00093886675,0.00032837645,0.9972144,0.00020413168,0.00013445191,0.00006129758,0.00008885397,0.000055005778,0.00097464095],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99748045,0.0011395896,0.0006625865,0.00035539625,0.000070810296,0.00029114715],"domain_scores_gemma":[0.9952729,0.0034200076,0.00046291604,0.00071062136,0.00010443251,0.000029126733],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0028605955,0.00035286671,0.00080774236,0.00014699914,0.00021625437,0.00004408489,0.0008385983,0.000674653,0.0006147683],"category_scores_gemma":[0.00018933513,0.00024548607,0.00024332192,0.000030939194,0.0008105357,0.00003233627,0.00032201575,0.0003820919,0.000003029025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006082906,0.0000161194,0.0000041081457,0.00003089537,0.000059110745,1.8958043e-7,0.00039382986,0.0000034842599,0.8871913,0.021272855,0.0000059096133,0.09096136],"study_design_scores_gemma":[0.00020163557,0.000070294314,0.0000036788688,0.00005982456,0.00010363437,0.0000035837172,0.00010065141,0.0009812275,0.920132,0.020860234,0.05721125,0.00027203312],"about_ca_topic_score_codex":0.002041325,"about_ca_topic_score_gemma":0.00029975473,"teacher_disagreement_score":0.09068933,"about_ca_system_score_codex":0.000023114704,"about_ca_system_score_gemma":0.000063688036,"threshold_uncertainty_score":0.99999976},"labels":[],"label_agreement":null},{"id":"W4251990974","doi":"10.1007/978-1-60761-454-8","title":"Functional Glycomics","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; Institute for Marine Biosciences; National Research Council Canada","funders":"","keywords":"Glycomics; Computer science; Biology; Molecular biology; Glycan","score_opus":0.0271593439141298,"score_gpt":0.3362824001757321,"score_spread":0.3091230562616023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4251990974","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00012979937,0.0016270159,0.11069832,0.000097892065,0.000177728,0.000052995725,0.000041619616,0.00006995457,0.8871047],"genre_scores_gemma":[0.00002408938,0.00017144297,0.34465238,0.0005246222,0.00052844686,0.000039505558,0.00090745225,0.00008440637,0.65306765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818206,0.00018353836,0.00048234593,0.00068422535,0.00009982839,0.00036803054],"domain_scores_gemma":[0.99855715,0.00045809662,0.00019373866,0.00066713797,0.00004440345,0.00007948092],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005159689,0.0004183948,0.00068185665,0.000119020835,0.000033497723,0.00001517929,0.0003722335,0.0016342548,0.00260802],"category_scores_gemma":[0.0003810778,0.0004468151,0.00033771267,0.00007288545,0.00016822518,0.000010142318,0.0001187043,0.0009111138,0.000032095842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000396858,0.000034872573,0.000008780106,0.000084491134,0.00008435181,0.000113897455,0.000009256149,0.000018570161,0.9631124,0.0044315173,0.0028585142,0.02920367],"study_design_scores_gemma":[0.00024508007,0.00001219178,0.0000014533397,0.000068226385,0.000057612928,0.000044012504,0.0000040359496,0.000038864357,0.5869345,0.09813789,0.31401494,0.0004411631],"about_ca_topic_score_codex":0.000004231193,"about_ca_topic_score_gemma":0.0000017110185,"teacher_disagreement_score":0.37617788,"about_ca_system_score_codex":0.0003030103,"about_ca_system_score_gemma":0.00025103518,"threshold_uncertainty_score":0.99979836},"labels":[],"label_agreement":null},{"id":"W4252365130","doi":"10.1007/978-1-60327-815-7","title":"DNA Replication","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Directorate for Biological Sciences; Korea Advanced Institute of Science and Technology; Commissariat à l'Énergie Atomique et aux Énergies Alternatives; Universität Wien; University of Exeter; College of Medicine, Drexel University; University of Aberdeen; University of Alberta; University of Oxford; Centro de Biología Molecular Severo Ochoa; Simon Fraser University; Drexel University; Albert Einstein Cancer Center; University of Minnesota; Universität Duisburg-Essen; University of Southern California","keywords":"DNA replication; Replication (statistics); Semiconservative replication; Control of chromosome duplication; Eukaryotic DNA replication; Biology; Origin recognition complex; DNA; Computational biology; Genetics; Virology","score_opus":0.01421118163437241,"score_gpt":0.36543645446144163,"score_spread":0.3512252728270692,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252365130","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0016693013,0.0057910797,0.34059548,0.00023944047,0.0002842893,0.00046464682,0.000032427404,0.000053793745,0.65086955],"genre_scores_gemma":[0.0001705677,0.0007279839,0.5551459,0.0021816636,0.0006271396,0.000079805446,0.0026345314,0.00014133283,0.43829104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973883,0.0003870259,0.0004976694,0.0012245664,0.00009044722,0.00041196294],"domain_scores_gemma":[0.99782336,0.000034702134,0.00025644968,0.0017177155,0.00007409979,0.00009368917],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008933694,0.00043116577,0.0005024012,0.00012087888,0.000033462435,0.000013104381,0.0006138171,0.0016498276,0.000052892326],"category_scores_gemma":[0.00045802412,0.0004559138,0.00025234398,0.00008444111,0.00018837198,0.000001160353,0.00023136393,0.00044691088,0.000019704243],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003149049,0.000033431752,0.000021653335,0.000025499727,0.000052108517,0.000016625418,0.000005686547,0.0000029129146,0.9454087,0.0014147033,0.010817543,0.04216965],"study_design_scores_gemma":[0.00022937868,0.00014387218,0.000012633915,0.000024200195,0.000024036808,0.000026593814,0.0000017330627,0.0000048374072,0.49871278,0.016020514,0.48446348,0.00033594947],"about_ca_topic_score_codex":0.0000024681563,"about_ca_topic_score_gemma":0.0000024818553,"teacher_disagreement_score":0.47364593,"about_ca_system_score_codex":0.00008111817,"about_ca_system_score_gemma":0.00024313429,"threshold_uncertainty_score":0.99978924},"labels":[],"label_agreement":null},{"id":"W4252365167","doi":"10.1007/978-1-0716-0154-9_20","title":"Detection of Intact Transcription Factors in Human Neutrophils","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chemokine; Transcription factor; Innate immune system; Proteases; Immunology; Cell biology; Biology; Inflammation; Endogeny; Gene; Immune system; Genetics; Enzyme; Biochemistry","score_opus":0.020865552125762417,"score_gpt":0.3357481534399498,"score_spread":0.3148826013141874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252365167","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86150074,0.00040227635,0.13700107,0.000023390889,0.0005050368,0.0003230682,0.0000067600836,0.00001936315,0.00021827866],"genre_scores_gemma":[0.98970634,0.000022823942,0.010031529,0.00007182562,0.0000061360265,0.000022361579,0.00005177619,0.000018879562,0.000068349866],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967582,0.0020208724,0.00046391136,0.00040606665,0.000019803518,0.00033112167],"domain_scores_gemma":[0.99940634,0.00012242091,0.000131108,0.00029371813,0.00003291654,0.000013489313],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007225762,0.00020305182,0.00050446717,0.0004919817,0.000027533648,0.0000029110768,0.0002094231,0.00042541116,0.00021888321],"category_scores_gemma":[0.000055893484,0.00018139069,0.00012012697,0.00032524695,0.00011776484,0.000047427406,0.000050357277,0.00042245735,0.000024949191],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007598896,0.00008616607,0.0056097456,0.000017620192,0.000034677323,0.0000042859497,0.00021007976,0.00001606109,0.9834465,0.0065146307,3.302836e-7,0.0039839232],"study_design_scores_gemma":[0.0011431177,0.000590774,0.009295126,0.000023072529,0.000011774517,0.0000063377656,0.00014368512,0.0000032712837,0.98243165,0.0057195197,0.00046306956,0.00016858258],"about_ca_topic_score_codex":0.00025535258,"about_ca_topic_score_gemma":0.0000559009,"teacher_disagreement_score":0.12820557,"about_ca_system_score_codex":0.000060189042,"about_ca_system_score_gemma":0.000017383667,"threshold_uncertainty_score":0.7396897},"labels":[],"label_agreement":null},{"id":"W4252421190","doi":"10.1007/978-1-0716-0880-7_2","title":"Bioinformatic Tools in Arabidopsis Research","year":2020,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Arabidopsis; Proteome; Computational biology; Genome; Computer science; Biology; Data science; Gene; Genetics","score_opus":0.162210131311318,"score_gpt":0.42893490580723836,"score_spread":0.26672477449592036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252421190","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013052959,0.007425863,0.0077632787,0.010555536,0.0006301041,0.004341439,0.0007178853,0.00023029975,0.9552826],"genre_scores_gemma":[0.018673837,0.007329088,0.83271587,0.010725169,0.0015714619,0.0014494916,0.009343219,0.00012134228,0.118070506],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9943942,0.0024480305,0.0008384671,0.0009982293,0.0003388643,0.0009822241],"domain_scores_gemma":[0.997122,0.0021359478,0.00016543327,0.0002622685,0.00012283465,0.00019152611],"candidate_categories":["research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.004828893,0.00045617588,0.0009579219,0.00032248313,0.00008484445,0.000059780406,0.0012496529,0.001501,0.0005816248],"category_scores_gemma":[0.0017506682,0.00021863313,0.00024770937,0.0005583574,0.0005474938,0.000047965794,0.0008566336,0.0023645458,0.00035485937],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000864105,0.000034983546,0.00043493675,0.000039622766,0.00005057907,0.00058194494,0.000041807638,0.0000024535893,0.745552,0.0502082,0.00024040282,0.20272663],"study_design_scores_gemma":[0.0009461421,0.0022310512,0.002219683,0.0005283449,0.000036252957,0.00017310902,0.00013685439,0.00040015444,0.034534525,0.3587008,0.5979613,0.002131778],"about_ca_topic_score_codex":0.00011681492,"about_ca_topic_score_gemma":0.0003704522,"teacher_disagreement_score":0.83721215,"about_ca_system_score_codex":0.00016311674,"about_ca_system_score_gemma":0.00007793446,"threshold_uncertainty_score":0.99993706},"labels":[],"label_agreement":null},{"id":"W4252643142","doi":"10.1007/978-1-4939-2425-7_14","title":"Using Light Scattering to Determine the Stoichiometry of Protein Complexes","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada Research Chairs; University of Toronto","funders":"","keywords":"Refractometry; Size-exclusion chromatography; Multiangle light scattering; Chemistry; Light scattering; Stoichiometry; Refractometer; Scattering; Chromatography; Laser; Dynamic light scattering; Static light scattering; Analytical Chemistry (journal); Optics; Refractive index; Materials science; Physics; Nanotechnology; Physical chemistry; Biochemistry","score_opus":0.09643326655821777,"score_gpt":0.4357602628164123,"score_spread":0.3393269962581945,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252643142","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57163227,0.00052028574,0.42695305,0.00017585295,0.00010639239,0.0002838049,0.000006668969,0.000003131645,0.00031858924],"genre_scores_gemma":[0.51197624,0.0000059195345,0.48761597,0.00020085702,0.000085807354,0.00003556602,0.000010157981,0.00002206533,0.000047428],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806017,0.0008697743,0.00030420063,0.00033502243,0.00009632376,0.0003344827],"domain_scores_gemma":[0.9991873,0.000030542986,0.00007607702,0.00047849625,0.00012053154,0.00010705691],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016981447,0.00014905042,0.0002617104,0.00015790398,0.000034809465,0.000012685959,0.0004118008,0.00016117598,0.000010362304],"category_scores_gemma":[0.00077276386,0.00011069288,0.00007311026,0.00037349027,0.00015735916,0.0000018312202,0.00042173298,0.00011877515,0.0000024694648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010593696,0.000027608847,0.000708327,0.000013109378,0.00002065749,0.0000035503201,0.00005169906,0.00007133851,0.9857199,0.00022468282,0.000010308513,0.01304285],"study_design_scores_gemma":[0.00034435507,0.000346808,0.00020236653,0.00001581858,0.000005379543,0.000013058259,0.000035976565,0.00016649536,0.9859989,0.0007055745,0.012025724,0.0001395378],"about_ca_topic_score_codex":0.000085708125,"about_ca_topic_score_gemma":0.00002407836,"teacher_disagreement_score":0.06066293,"about_ca_system_score_codex":0.000022017066,"about_ca_system_score_gemma":0.000083604355,"threshold_uncertainty_score":0.45139247},"labels":[],"label_agreement":null},{"id":"W4252772384","doi":"10.1007/978-1-60327-310-7","title":"Membrane Proteomics","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia","funders":"","keywords":"Proteomics; Chemistry; Biochemistry","score_opus":0.019472357430024248,"score_gpt":0.39086217867642176,"score_spread":0.3713898212463975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4252772384","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009852164,0.0003707396,0.6525829,0.0000762516,0.000016724072,0.0003000726,0.000022829923,0.000110360255,0.3465103],"genre_scores_gemma":[0.0000010006281,0.00027967567,0.84616995,0.0002980457,0.00009106805,0.00036228323,0.00025170733,0.000066786604,0.15247948],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982912,0.00012065343,0.0004927546,0.0006753131,0.000063128,0.00035697877],"domain_scores_gemma":[0.9986263,0.000118129,0.00027614238,0.00087197026,0.000045539495,0.000061914616],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000448974,0.0003763644,0.0006025333,0.00013986249,0.000036992173,0.000010569864,0.0005691726,0.0012656233,0.0002453638],"category_scores_gemma":[0.00013398229,0.00039569,0.00018249665,0.00008627448,0.00013593142,0.000011888892,0.00015589612,0.0010544028,0.000012858742],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010820599,0.000026647707,0.0000021858434,0.00006440553,0.00002000593,0.000018816852,0.000008261953,0.000013842594,0.9024256,0.06569504,0.00024759927,0.031466767],"study_design_scores_gemma":[0.00010676462,0.000017372276,7.369702e-8,0.000048059643,0.000014025718,0.000010914281,8.2836186e-7,0.00003333292,0.4856893,0.3219971,0.19183032,0.00025188626],"about_ca_topic_score_codex":0.0000046420805,"about_ca_topic_score_gemma":0.0000020101486,"teacher_disagreement_score":0.41673627,"about_ca_system_score_codex":0.00023162094,"about_ca_system_score_gemma":0.00016280315,"threshold_uncertainty_score":0.9998495},"labels":[],"label_agreement":null},{"id":"W4253005829","doi":"10.1007/978-1-4939-9597-4_1","title":"Introduction to the Immune System","year":2019,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":167,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Multicellular organism; Immune system; Organism; Biology; Acquired immune system; Innate immune system; Immunity; Mechanism (biology); Autoimmunity; Immunology; Cell; Genetics; Philosophy","score_opus":0.02499319325832197,"score_gpt":0.4248316836432698,"score_spread":0.39983849038494784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253005829","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16008279,0.0021286872,0.8042434,0.020229353,0.0018719588,0.00202028,0.0000019607146,0.000075327625,0.009346238],"genre_scores_gemma":[0.103263706,0.000050326606,0.878276,0.0014812996,0.0013533131,0.00023946118,0.00003113293,0.00007517128,0.015229603],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99772525,0.0013715203,0.00021843254,0.00032028463,0.00009614301,0.00026837777],"domain_scores_gemma":[0.99900424,0.00013424136,0.000030895848,0.0007236101,0.00005935802,0.000047633814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029070391,0.000095486954,0.00028837068,0.00017153352,0.000020241794,0.0000068618183,0.00017225106,0.000117704774,0.00084704504],"category_scores_gemma":[0.00033890968,0.00006296773,0.00008056262,0.00041724383,0.000047805723,0.0000073698807,0.000106176005,0.00030101775,0.00026362608],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015979997,0.000017050692,0.0007253513,0.00003052251,0.000034762452,0.00001039085,0.00009338553,0.000031782616,0.94129163,0.004788946,0.000074415424,0.052741956],"study_design_scores_gemma":[0.00065189117,0.0004692931,0.0012309902,0.000022965629,0.000014548248,0.00012867917,0.00018405342,0.00036284898,0.7583575,0.0002653916,0.23822019,0.000091623326],"about_ca_topic_score_codex":0.00007416773,"about_ca_topic_score_gemma":0.000002735943,"teacher_disagreement_score":0.23814577,"about_ca_system_score_codex":0.0001359351,"about_ca_system_score_gemma":0.000037538633,"threshold_uncertainty_score":0.92745495},"labels":[],"label_agreement":null},{"id":"W4253203605","doi":"10.1007/978-1-61779-276-2_7","title":"Array-Based Synthetic Genetic Screens to Map Bacterial Pathways and Functional Networks in Escherichia coli","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Epistasis; Genetic Fitness; Mutant; Biology; Gene; Phenotype; Genetic screen; Computational biology; Genetics; Function (biology); Mutation; Model organism","score_opus":0.023117125593077218,"score_gpt":0.28227603036319865,"score_spread":0.25915890477012143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253203605","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4391808,0.0006499313,0.5596422,0.000036470115,0.00018670883,0.00019256031,0.0000044101944,0.000008120952,0.00009884073],"genre_scores_gemma":[0.48524734,0.000026677766,0.51393867,0.00047410233,0.00011346423,0.00008814574,0.00005798775,0.000035620556,0.000017991939],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99679184,0.001354436,0.00044144513,0.00080941804,0.000074749856,0.00052810746],"domain_scores_gemma":[0.9990819,0.00004666529,0.000100176025,0.00055263424,0.000055192195,0.00016341657],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093815423,0.00030360703,0.00040808474,0.00022945748,0.00004538474,0.000013307794,0.00022653156,0.00044186544,0.00008643403],"category_scores_gemma":[0.00014887609,0.00031491375,0.00012797673,0.00034465294,0.0001825947,0.0000020054463,0.00016395649,0.00018535332,0.0000050551585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023211152,0.00007413148,0.012784741,0.000008779492,0.000055997887,0.000016875822,0.000027999726,0.00490897,0.97814465,0.00013808561,0.000028062157,0.0035795993],"study_design_scores_gemma":[0.002026276,0.0010681023,0.087477975,0.000047862508,0.0001192703,0.000022258473,0.000065712586,0.0067957975,0.89237475,0.0019290954,0.0069589075,0.0011139815],"about_ca_topic_score_codex":0.00006051325,"about_ca_topic_score_gemma":0.00016874737,"teacher_disagreement_score":0.085769884,"about_ca_system_score_codex":0.000031392807,"about_ca_system_score_gemma":0.00008712348,"threshold_uncertainty_score":0.9999303},"labels":[],"label_agreement":null},{"id":"W4253263975","doi":"10.1007/978-1-4939-0835-6_3","title":"Computational Methods for Pseudogene Annotation Based on Sequence Homology","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Pseudogene; Annotation; Genome; Homology (biology); Genome project; Sequence homology; Gene; Computational biology; Genetics; Biology; Human genome; Sequence (biology); DNA sequencing; Gene Annotation; Computer science; Base sequence","score_opus":0.035669029881244936,"score_gpt":0.4226295352793153,"score_spread":0.38696050539807036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253263975","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.033700995,0.00041870092,0.96439826,0.0003527875,0.0003069844,0.00033929912,0.000025380654,0.0000061674336,0.00045144637],"genre_scores_gemma":[0.11945508,0.000017522723,0.8780965,0.001954777,0.00008080061,0.0001780573,0.0001667035,0.000027330598,0.000023189075],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969871,0.0016862709,0.0003286555,0.0006134705,0.000044129054,0.0003403515],"domain_scores_gemma":[0.99885416,0.0004892305,0.000119045944,0.00035444557,0.00012887872,0.00005424353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019899192,0.00022065407,0.000307233,0.00013862255,0.00007727614,0.000009214583,0.00023757303,0.00026457894,0.0000053366493],"category_scores_gemma":[0.0010051493,0.0002185154,0.00013459832,0.00013218462,0.00017427804,4.708262e-7,0.00007914249,0.00009703961,0.0000017643501],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008949755,0.0000447844,0.0007803255,0.000011772055,0.00003354433,6.5701556e-7,0.000014971709,0.02432018,0.9003371,0.0058838343,0.000023476872,0.06845985],"study_design_scores_gemma":[0.0019325422,0.0020885498,0.0017939877,0.000010530491,0.00003721549,0.000016282589,0.000016724698,0.12035852,0.75379163,0.08337649,0.03602843,0.00054910977],"about_ca_topic_score_codex":0.000009368613,"about_ca_topic_score_gemma":0.0000040884975,"teacher_disagreement_score":0.14654548,"about_ca_system_score_codex":0.000021655867,"about_ca_system_score_gemma":0.00006724923,"threshold_uncertainty_score":0.8910799},"labels":[],"label_agreement":null},{"id":"W4253610652","doi":"10.1007/978-1-62703-161-5","title":"Legionella","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Legionella and Acanthamoeba research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Tufts University School of Medicine; Perelman School of Medicine, University of Pennsylvania; Imperial College London; Dalhousie University; Universität zu Köln; Directorate for Biological Sciences; Robert Koch Institut; Université de Lyon; Technische Universität München; Universidade de São Paulo; Centre National de la Recherche Scientifique; Université de Poitiers; Technische Universität Braunschweig; Bundesministerium für Bildung und Forschung; Hospices Civils de Lyon; Agence Nationale de la Recherche; University of Washington; Northwestern University; Medical School, University of Michigan; McGill University; Deutsche Forschungsgemeinschaft; University of Pennsylvania; Yale University; Università degli Studi di Torino; Brigham and Women's Hospital","keywords":"Legionella; Legionnaires' disease; Pneumonia; Medicine; Mortality rate; Atypical pneumonia; Disease; Intensive care medicine; Legionella pneumophila; Biology; Pathology; Internal medicine; Bacteria","score_opus":0.03361998223909445,"score_gpt":0.4066304466800425,"score_spread":0.37301046444094804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4253610652","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00043764175,0.022839854,0.4557785,0.00024413872,0.0011593841,0.00073899416,0.0000442909,0.0000346351,0.51872253],"genre_scores_gemma":[0.00058215245,0.0017737573,0.31896344,0.0011907049,0.0015888605,0.00013987852,0.0013906795,0.0002407591,0.6741298],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99666566,0.0009639164,0.00048245394,0.00088773813,0.00015211134,0.00084815006],"domain_scores_gemma":[0.99849296,0.00007435438,0.00017467837,0.0009756555,0.00009538833,0.00018696908],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0015086357,0.00049545156,0.0006001483,0.00030127497,0.000053362488,0.000018658537,0.000687053,0.0016780664,0.00010874376],"category_scores_gemma":[0.00023674605,0.00047660794,0.000318437,0.00012709099,0.00038679605,0.0000019137974,0.00060429535,0.00075159123,0.00009164954],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074163174,0.000088373374,0.0004267993,0.00007299509,0.00016391322,0.00005792495,0.000026996444,0.0000078222665,0.95492697,0.009354115,0.016485872,0.018314065],"study_design_scores_gemma":[0.0004981517,0.00019654854,0.00002326587,0.000033489327,0.000032075666,0.00005227075,0.0000058942974,0.0000064476494,0.12083878,0.009925854,0.8678227,0.00056451],"about_ca_topic_score_codex":0.000020004793,"about_ca_topic_score_gemma":0.000012823969,"teacher_disagreement_score":0.85133684,"about_ca_system_score_codex":0.000092183516,"about_ca_system_score_gemma":0.0004493862,"threshold_uncertainty_score":0.99976856},"labels":[],"label_agreement":null},{"id":"W4254380374","doi":"10.1007/978-1-61779-545-9","title":"Ribozymes","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Illinois at Urbana-Champaign; Universität Zürich; Universität Innsbruck; Division of Chemistry; University of Bern; Universität Konstanz; Centre National de la Recherche Scientifique; Precursory Research for Embryonic Science and Technology; Center for Molecular Biosciences, University of Innsbruck; California Institute of Technology; Universität Hamburg; Kent State University; McMaster University; Universität Greifswald; University of Tokyo; Pennsylvania State University; Université de Sherbrooke; Beckman Research Institute, City of Hope; University of California, Irvine; University of Otago; University of Miami; University of Rochester; Université de Strasbourg; University of Texas Southwestern Medical Center; Philipps-Universität Marburg; Univerzita Komenského v Bratislave; Wayne State University; Yale University","keywords":"Psychology","score_opus":0.023043230953700866,"score_gpt":0.3646033468226425,"score_spread":0.34156011586894164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254380374","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006829624,0.021876825,0.7711265,0.00006859866,0.000862238,0.00048544645,0.000039269038,0.000024955429,0.20544784],"genre_scores_gemma":[0.000054273467,0.00064469286,0.7244746,0.00069993857,0.000646902,0.0001548124,0.00052602985,0.00014849962,0.27265024],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965732,0.001364213,0.000496411,0.0008115383,0.00010615681,0.00064847304],"domain_scores_gemma":[0.99851245,0.00008457856,0.00024527623,0.0009687832,0.00005779131,0.00013114566],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0016857946,0.00052541157,0.0006540025,0.00021168453,0.000042362582,0.000014408434,0.0006035782,0.0018189916,0.00024348896],"category_scores_gemma":[0.0003587056,0.0005118276,0.0003255263,0.000073778356,0.00018804625,0.0000016352516,0.00038345502,0.00039574417,0.000068427085],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003584723,0.00003204564,0.000047469508,0.00003655677,0.00010782978,0.000014609914,0.000012184782,0.0000019940417,0.94456625,0.011948395,0.0021205847,0.041076217],"study_design_scores_gemma":[0.00017550877,0.0001450566,0.0000052962164,0.00002901671,0.000034946002,0.000022109314,0.000002594145,9.868193e-7,0.44849616,0.025127718,0.52555215,0.00040844147],"about_ca_topic_score_codex":0.000007057905,"about_ca_topic_score_gemma":0.000006616135,"teacher_disagreement_score":0.5234316,"about_ca_system_score_codex":0.00005585128,"about_ca_system_score_gemma":0.00023479886,"threshold_uncertainty_score":0.9997333},"labels":[],"label_agreement":null},{"id":"W4254868128","doi":"10.1007/978-1-62703-435-7_6","title":"Pyrosequencing of Clinically Relevant Polymorphisms","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Pyrosequencing; Indel; Genotyping; Biology; Genetics; Allele; Computational biology; Genotype; Single-nucleotide polymorphism; Gene","score_opus":0.027356259121411586,"score_gpt":0.4087383267394524,"score_spread":0.3813820676180408,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4254868128","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6271535,0.0013299851,0.3689996,0.00041643655,0.00015449453,0.00038604526,0.000006740204,0.00001318297,0.0015400301],"genre_scores_gemma":[0.50734943,0.00028987924,0.4915106,0.00039262985,0.00007677194,0.00008250947,0.00005299971,0.000027561235,0.00021762346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99762416,0.0005645861,0.0006966612,0.00052295247,0.00010360177,0.00048806655],"domain_scores_gemma":[0.9988906,0.00008402249,0.0001682582,0.00058765546,0.0001659269,0.000103565675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013253583,0.00019265796,0.00034611492,0.00011904077,0.000025417039,0.000009491898,0.00047842885,0.00042858694,0.00008285319],"category_scores_gemma":[0.0011740915,0.00017068785,0.00015411462,0.000271312,0.0004329861,0.0000051055795,0.00026019439,0.00023071365,0.000015889178],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002887505,0.00006124074,0.02221611,0.000017946762,0.000021728907,0.0000046864366,0.000016104603,0.000002533138,0.958198,0.0003002721,0.00007842386,0.019054063],"study_design_scores_gemma":[0.0003602358,0.00038029437,0.0010867597,0.000024681274,0.0000058538444,0.000019128966,0.000058564576,0.00007591376,0.9945301,0.0022732974,0.0009813155,0.00020388946],"about_ca_topic_score_codex":0.00025481725,"about_ca_topic_score_gemma":0.000008400717,"teacher_disagreement_score":0.122511,"about_ca_system_score_codex":0.00001736715,"about_ca_system_score_gemma":0.00011822876,"threshold_uncertainty_score":0.69604486},"labels":[],"label_agreement":null},{"id":"W4255327337","doi":"10.1007/978-1-0716-1740-3","title":"Mapping Genetic Interactions","year":2021,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Nutrition, Genetics, and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Computer science; Evolutionary biology; Computational biology; Biology","score_opus":0.02281064004731932,"score_gpt":0.37829845598188694,"score_spread":0.35548781593456763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255327337","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0015100988,0.033260636,0.8813419,0.00014968788,0.0014737452,0.0004933237,0.00013071692,0.000030448533,0.08160945],"genre_scores_gemma":[0.00017285348,0.0026424218,0.8265218,0.0015968828,0.0010148151,0.00017280628,0.0027957384,0.00015588819,0.16492678],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99667156,0.0010445791,0.00061406096,0.0010874015,0.000100456025,0.00048196557],"domain_scores_gemma":[0.9983932,0.000068014604,0.00021156743,0.0009813701,0.00018023439,0.00016563296],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040027912,0.00046847257,0.00055910595,0.00032275703,0.00006490989,0.000030954623,0.00041720216,0.0008384873,0.00021009154],"category_scores_gemma":[0.00040210664,0.0005484552,0.00040350138,0.0001433192,0.00023061718,0.0000014813457,0.00039063834,0.00043880107,0.000017909062],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004455539,0.00013892121,0.00038552718,0.00013898675,0.00023324798,0.00015688737,0.00004123125,0.00004854928,0.97330123,0.000709569,0.008580842,0.016220456],"study_design_scores_gemma":[0.0007890558,0.00017515494,0.0002110916,0.00013941525,0.000077168734,0.00010152722,0.000053197185,0.000028933599,0.082635276,0.020499563,0.89448166,0.0008079786],"about_ca_topic_score_codex":0.00000987285,"about_ca_topic_score_gemma":0.000037476388,"teacher_disagreement_score":0.89066595,"about_ca_system_score_codex":0.000091688984,"about_ca_system_score_gemma":0.000592944,"threshold_uncertainty_score":0.9996967},"labels":[],"label_agreement":null},{"id":"W4255458077","doi":"10.1007/978-1-61779-536-7","title":"Neurotrophic Factors","year":2012,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Nerve injury and regeneration","field":"Neuroscience","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Uppsala Universitet; Hacettepe Üniversitesi; Università degli Studi di Padova; Universidad de La Laguna; University of Pennsylvania; York University; Universidade Estadual de Campinas; University of Aberdeen; Civitan International; Università degli Studi di Sassari; McKnight Foundation","keywords":"Brain-derived neurotrophic factor; Neurotrophic factors; Neuroscience; Psychology; Medicine; Internal medicine; Receptor","score_opus":0.07832168246665218,"score_gpt":0.4183013848984114,"score_spread":0.33997970243175923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255458077","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0065145083,0.0020775043,0.77045995,0.00022320246,0.006179624,0.00094182143,0.0000700394,0.00016925675,0.21336408],"genre_scores_gemma":[0.0030554584,0.00035716523,0.40424755,0.0033774648,0.0011604046,0.00013756206,0.00022157175,0.00029484957,0.58714795],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99539846,0.002993255,0.000388591,0.00067431264,0.00010503488,0.00044033007],"domain_scores_gemma":[0.9987225,0.00046958704,0.00020307745,0.00050376484,0.000018024295,0.00008305243],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005951385,0.00035065186,0.000470607,0.00031671027,0.00006242579,0.000016154956,0.00042613453,0.0007709758,0.00015391667],"category_scores_gemma":[0.0007960764,0.0002908016,0.00018610369,0.00014704012,0.00026378888,0.000036194997,0.00017000175,0.0007686301,0.000053954158],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000072674156,0.000022819271,0.000034088578,0.000016493572,0.0000043084187,0.000036941656,0.00002048649,0.000010370428,0.9465508,0.049084127,0.00013360809,0.0040786793],"study_design_scores_gemma":[0.00010679866,0.00009766692,0.000016277123,0.000014281522,0.000018504827,0.000018909364,5.051808e-7,0.000020263935,0.84286225,0.036968224,0.119580016,0.00029629047],"about_ca_topic_score_codex":0.000003996045,"about_ca_topic_score_gemma":0.0000013464014,"teacher_disagreement_score":0.3737839,"about_ca_system_score_codex":0.000084193845,"about_ca_system_score_gemma":0.00010767387,"threshold_uncertainty_score":0.9999544},"labels":[],"label_agreement":null},{"id":"W4255575393","doi":"10.1007/978-1-4939-7196-1_39","title":"Thromboelastography (TEG)","year":2017,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Trauma, Hemostasis, Coagulopathy, Resuscitation","field":"Medicine","cited_by":82,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; St. Lawrence College","funders":"","keywords":"Thromboelastography; Computer science; Intensive care medicine; Risk analysis (engineering); Medicine; Internal medicine; Coagulation","score_opus":0.17592597922262088,"score_gpt":0.5543624374423215,"score_spread":0.3784364582197006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255575393","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000035993264,0.79757214,0.19635892,0.00005990687,0.0008182771,0.0011554315,0.000024328156,0.00006464903,0.0039427355],"genre_scores_gemma":[6.149633e-7,0.5783938,0.42095375,0.000099737474,0.000086567714,0.00016288922,0.00017182092,0.00007009218,0.000060704082],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9943895,0.0028846576,0.0009834354,0.0009859072,0.0001640802,0.0005924746],"domain_scores_gemma":[0.9969503,0.0005251567,0.0006432093,0.0016248839,0.0001009527,0.00015548387],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00230233,0.00062556076,0.003385403,0.0010678086,0.00008208095,0.000028977405,0.0005633101,0.0012636051,0.000056776673],"category_scores_gemma":[0.0019746935,0.0005137103,0.0010355023,0.0005381563,0.00041180235,0.000030219986,0.0002024053,0.0011154147,0.000062452644],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012668516,0.00007344777,0.000068405396,0.004290497,0.00025282326,0.0001647296,0.000029447338,1.0036332e-7,0.0006182514,0.0010045597,0.00003418762,0.9934509],"study_design_scores_gemma":[0.00045340377,0.00028945008,0.00008881505,0.0045700753,0.000944991,0.00018185515,0.0000101807445,0.0000024709045,0.00017820159,0.002305019,0.9905402,0.00043535617],"about_ca_topic_score_codex":0.000027060034,"about_ca_topic_score_gemma":0.00001044964,"teacher_disagreement_score":0.9930155,"about_ca_system_score_codex":0.00014828688,"about_ca_system_score_gemma":0.00038939196,"threshold_uncertainty_score":0.9997314},"labels":[],"label_agreement":null},{"id":"W4255580925","doi":"10.1007/978-1-0716-1386-3_7","title":"Detection and Labeling of Small Non-Coding RNAs by Splinted Ligation","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge","funders":"","keywords":"Ligation; Nucleic acid; Oligonucleotide; RNA; microRNA; DNA; Long non-coding RNA; Computational biology; Small RNA; Biology; Molecular biology; Chemistry; Genetics; Gene","score_opus":0.013769128004782851,"score_gpt":0.33604005558754324,"score_spread":0.3222709275827604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255580925","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3864669,0.0014496569,0.61185575,0.00002662442,0.00006334659,0.00007342002,0.0000043945997,0.0000036255299,0.000056333083],"genre_scores_gemma":[0.5125081,0.00017433485,0.48701307,0.000091933776,0.000029521438,0.000014881627,0.00012081679,0.000017786992,0.000029550765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874395,0.00045065442,0.0002697143,0.00034828263,0.000033479264,0.00015393252],"domain_scores_gemma":[0.99949026,0.000034648438,0.000112311565,0.00022110618,0.0001039341,0.000037762176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052156835,0.000113322094,0.00017316516,0.000066316956,0.000025426058,0.0000071799086,0.000069173795,0.00023647475,0.0000053601466],"category_scores_gemma":[0.00046698123,0.00012635202,0.000053877095,0.00015887576,0.0000703645,0.0000018596945,0.00010600474,0.000084570835,3.7346334e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025866537,0.00002455216,0.00068181416,0.000030467354,0.000030027488,0.000002594741,0.000017635391,0.000050392475,0.9751253,0.00008259727,0.0000035394712,0.023925222],"study_design_scores_gemma":[0.00038243574,0.00007296392,0.0005817483,0.000022584145,0.000018571649,0.000014767767,0.000027058237,0.0012404922,0.9961369,0.0007790169,0.0006041982,0.000119288634],"about_ca_topic_score_codex":0.000019420362,"about_ca_topic_score_gemma":0.000020493975,"teacher_disagreement_score":0.12604122,"about_ca_system_score_codex":0.00001639024,"about_ca_system_score_gemma":0.000037685946,"threshold_uncertainty_score":0.5152486},"labels":[],"label_agreement":null},{"id":"W4255623231","doi":"10.1007/978-1-60761-401-2","title":"Immunotoxicity Testing","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immunotoxicology and immune responses","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"State University of New York Upstate Medical University; College of Veterinary Medicine, Cornell University; School of Medicine, New York University; Universiteit Utrecht; Università degli Studi di Milano; Bristol-Myers Squibb; York University; West Virginia University; School of Medicine, Virginia Commonwealth University; Virginia Commonwealth University; School of Medicine, University of South Carolina; State University of New York; University of South Carolina; Pfizer; East Carolina University; Colgate-Palmolive Company; Syracuse University","keywords":"Immunotoxicology; Risk analysis (engineering); Engineering ethics; Engineering; Medicine; Immunology; Immune system","score_opus":0.02937694925735328,"score_gpt":0.36868680641614987,"score_spread":0.3393098571587966,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255623231","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011708576,0.11715262,0.16672409,0.00027062182,0.0035089515,0.0019858726,0.00006864088,0.0004978311,0.70862055],"genre_scores_gemma":[0.00022888652,0.0004176778,0.34247154,0.0019151162,0.00008535416,0.00016145839,0.00072724605,0.0001642257,0.6538285],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99102587,0.0055440534,0.0011807946,0.0010699197,0.000039528757,0.0011398192],"domain_scores_gemma":[0.99577934,0.0023292813,0.0005632359,0.0011553166,0.00014387131,0.000028947416],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.00292488,0.00084531703,0.0016497762,0.00083385647,0.00020327712,0.000017767854,0.0010990775,0.0039749225,0.00069149863],"category_scores_gemma":[0.002935982,0.00083408033,0.0004089476,0.00033060132,0.0009856769,0.00004293698,0.00042649606,0.002929574,0.00056440075],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023857469,0.00012295735,0.000056169734,0.000026962105,0.00029693497,0.00010322763,0.0000532859,0.0000042778966,0.8930498,0.0069158953,0.0024155588,0.0967164],"study_design_scores_gemma":[0.0017446076,0.0010930875,0.0004899793,0.00027052665,0.00015045294,0.00048209622,0.000013233232,0.0000034658271,0.41075227,0.06079719,0.5230206,0.0011824835],"about_ca_topic_score_codex":0.000035445926,"about_ca_topic_score_gemma":0.0000049404216,"teacher_disagreement_score":0.5206051,"about_ca_system_score_codex":0.0003538626,"about_ca_system_score_gemma":0.0007894979,"threshold_uncertainty_score":0.999411},"labels":[],"label_agreement":null},{"id":"W4255886890","doi":"10.1007/978-1-4939-7274-6_4","title":"Identifying Cryptic Relationships","year":2017,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; Mount Sinai Hospital; Public Health Ontario; University of Toronto","funders":"","keywords":"Genome-wide association study; Population stratification; Biology; Genetic association; Computational biology; Population; Genetics; Single-nucleotide polymorphism; Genotype; Medicine; Gene","score_opus":0.08712081219480006,"score_gpt":0.45222784674765,"score_spread":0.36510703455284993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255886890","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22894758,0.0006495727,0.76543266,0.0005066281,0.00036988122,0.00013979255,0.0000036537697,0.000009486944,0.003940761],"genre_scores_gemma":[0.39855233,0.000086591186,0.6006587,0.00021186931,0.00007845912,0.0000388859,0.00003736448,0.000017001965,0.000318778],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9972919,0.0014591372,0.00035532188,0.0004756162,0.000043917687,0.0003740824],"domain_scores_gemma":[0.99858385,0.00009856733,0.000252914,0.0009419822,0.00005772194,0.00006495723],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025299892,0.00015950821,0.00025851396,0.00009315514,0.00034213744,0.000035375604,0.0005089981,0.00041393665,0.000025672687],"category_scores_gemma":[0.0049244184,0.00016183281,0.00011696111,0.000055274424,0.00021030047,0.0000034064926,0.000319411,0.00025083867,0.00002217873],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010898902,0.000024903946,0.24027199,0.000005057375,0.00004086169,0.000005603858,0.0000342774,0.00005770619,0.748888,0.003760448,0.000103309554,0.0067969603],"study_design_scores_gemma":[0.0015315108,0.0002978874,0.7080484,0.000027738291,0.000058509428,0.00003977532,0.00022213018,0.0005751223,0.14074536,0.1268476,0.020819325,0.00078661775],"about_ca_topic_score_codex":0.00006184767,"about_ca_topic_score_gemma":0.000059326754,"teacher_disagreement_score":0.6081426,"about_ca_system_score_codex":0.000022671149,"about_ca_system_score_gemma":0.00004905698,"threshold_uncertainty_score":0.65993506},"labels":[],"label_agreement":null},{"id":"W4255903463","doi":"10.1007/978-1-0716-0892-0_12","title":"Navigating the Global Protein–Protein Interaction Landscape Using iRefWeb","year":2020,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Identifier; Computer science; Interface (matter); Data integration; Resource (disambiguation); Information retrieval; World Wide Web; Database; Data science","score_opus":0.025762565879413977,"score_gpt":0.38377422856294646,"score_spread":0.35801166268353246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4255903463","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30798042,0.00062525575,0.68961954,0.00081620354,0.00010802297,0.0003380576,0.000007788059,0.00001118705,0.0004935368],"genre_scores_gemma":[0.5205013,0.000008591089,0.47747222,0.0016885166,0.00021541261,0.000039556544,0.000049105372,0.000018696614,0.0000065864874],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832433,0.00059757865,0.00036340865,0.0003373695,0.000058443537,0.00031885089],"domain_scores_gemma":[0.9994146,0.000015991583,0.00016244518,0.0002934875,0.000039651903,0.00007382961],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065717165,0.0001899599,0.00020255717,0.000010007881,0.000079387384,0.000030381363,0.00031386712,0.0002609958,0.000015741098],"category_scores_gemma":[0.0002346438,0.00014707276,0.00010692491,0.00021421962,0.000099543715,0.000003820584,0.00028123002,0.00039578328,0.000004835461],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006139298,0.000012485886,0.0005914046,0.000015918791,0.000037660528,0.000004521273,0.00007478597,0.0007580382,0.9649523,0.0013007718,0.000016316695,0.032174412],"study_design_scores_gemma":[0.0017293879,0.0009068516,0.00013917201,0.00015115809,0.000053300406,0.00010742314,0.00086061266,0.097834595,0.8537106,0.017596576,0.02593941,0.0009709013],"about_ca_topic_score_codex":0.00003920986,"about_ca_topic_score_gemma":0.000011962691,"teacher_disagreement_score":0.2125209,"about_ca_system_score_codex":0.000025745958,"about_ca_system_score_gemma":0.000054518212,"threshold_uncertainty_score":0.5997453},"labels":[],"label_agreement":null},{"id":"W4256077975","doi":"10.1007/978-1-62703-330-5_11","title":"Qualitatively Monitoring Binding and Expression of the Transcription Factor Sp1 as a Useful Tool to Evaluate the Reliability of Primary Cultured Epithelial Stem Cells in Tissue Reconstruction","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier universitaire de Québec; Université Laval","funders":"","keywords":"Transcription factor; Cell biology; Biology; In vitro; Western blot; Gene expression; Cell culture; Sp1 transcription factor; Molecular biology; Stem cell; Promoter; Gene; Genetics","score_opus":0.056309244304172515,"score_gpt":0.3964894844667096,"score_spread":0.3401802401625371,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256077975","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9880629,0.00012579856,0.010495797,0.00012900647,0.00027098064,0.00087711314,0.000011691265,0.000004651824,0.00002204311],"genre_scores_gemma":[0.91455656,0.000027949687,0.08528044,0.000021123604,0.0000105899,0.00006780229,0.0000015094784,0.000006402296,0.000027597689],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99702716,0.002160859,0.0003756068,0.00022624785,0.00008485523,0.00012527825],"domain_scores_gemma":[0.9992674,0.00033168241,0.00010193102,0.00020671154,0.00006519578,0.000027073149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011954416,0.00010521336,0.0003168763,0.00007478478,0.000025948953,0.000003354119,0.00006234242,0.00011629294,0.000013579233],"category_scores_gemma":[0.00028172595,0.00005725051,0.000059150585,0.00020309049,0.00009973455,0.000037646878,0.000039070896,0.00013873995,0.0000012481794],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015901502,0.0000450617,0.04931228,0.00004351843,0.00001068681,9.537367e-7,0.0015118713,0.000011025541,0.87027454,0.000012310561,3.050124e-7,0.078618415],"study_design_scores_gemma":[0.00052781985,0.00017241106,0.11443468,0.0001560184,0.000020923928,0.0000055417113,0.0003316742,0.000013213982,0.88315266,0.0011083761,0.000028548811,0.000048130183],"about_ca_topic_score_codex":0.00024297003,"about_ca_topic_score_gemma":0.0000027505946,"teacher_disagreement_score":0.078570284,"about_ca_system_score_codex":0.00007565463,"about_ca_system_score_gemma":0.0000320201,"threshold_uncertainty_score":0.2334608},"labels":[],"label_agreement":null},{"id":"W4256159582","doi":"10.1007/978-1-60761-588-0","title":"RNA Interference","year":2010,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"RNA interference; Interference (communication); Computer science; Computational biology; Biology; RNA; Genetics; Telecommunications; Gene; Channel (broadcasting)","score_opus":0.02522196099702263,"score_gpt":0.40798027882400334,"score_spread":0.3827583178269807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256159582","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032948933,0.0033305413,0.77506083,0.00012603133,0.0006935495,0.0004648967,0.00003556974,0.000023295273,0.21697037],"genre_scores_gemma":[0.00030307707,0.0005090972,0.5072504,0.00067102426,0.00039234295,0.0000892168,0.0005313044,0.00011648843,0.490137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971486,0.00076925027,0.0004429809,0.0009129259,0.000106194646,0.00062009745],"domain_scores_gemma":[0.99852324,0.00008338562,0.00015990985,0.0009765484,0.00010563839,0.00015128116],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0013343013,0.00041618492,0.0005339329,0.00026934277,0.000041995903,0.000024796678,0.0008452824,0.0016700963,0.0001189754],"category_scores_gemma":[0.0008201741,0.00039786618,0.00023814206,0.000088334076,0.00034868516,0.0000013843025,0.00061969983,0.0013371863,0.000033024782],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048150734,0.000019970641,0.000046569727,0.000027680091,0.000059577458,0.000041076837,0.0000065360728,0.00000213686,0.95601904,0.0024371904,0.0016424386,0.0396496],"study_design_scores_gemma":[0.00045165553,0.00051422487,0.000015774822,0.00006427561,0.0000189741,0.000038463422,0.0000050535023,0.000045815108,0.5785986,0.01565111,0.4040101,0.0005859489],"about_ca_topic_score_codex":0.00002711082,"about_ca_topic_score_gemma":0.00009047836,"teacher_disagreement_score":0.40236765,"about_ca_system_score_codex":0.000050697705,"about_ca_system_score_gemma":0.00046254366,"threshold_uncertainty_score":0.9998473},"labels":[],"label_agreement":null},{"id":"W4256217645","doi":"10.1007/978-1-0716-1138-8_4","title":"Research Ethics for Clinical Researchers","year":2021,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Ethics in Clinical Research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Confidentiality; Engineering ethics; Informed consent; Ethical issues; Research ethics; Process (computing); Psychology; Political science; Management science; Medicine; Engineering; Computer science; Law; Alternative medicine","score_opus":0.9422229985281528,"score_gpt":0.8150113965935952,"score_spread":0.1272116019345576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256217645","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000024767802,0.014838846,0.41134647,0.028488498,0.0010758612,0.0028613047,0.000065138396,0.00005965417,0.54123944],"genre_scores_gemma":[0.0000056147696,0.017700063,0.621908,0.0022799976,0.0004971615,0.00016556363,0.0001707974,0.00016549572,0.35710728],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.97449416,0.016160453,0.002619079,0.0027816382,0.0021570635,0.0017876114],"domain_scores_gemma":[0.776788,0.21483473,0.00024069115,0.0025308654,0.0049591404,0.0006465422],"candidate_categories":["metaresearch","metaepi_narrow","sts","research_integrity"],"consensus_categories":["metaresearch","research_integrity"],"category_scores_codex":[0.2233949,0.00044197566,0.0019393623,0.0010602247,0.00017379451,0.000043979562,0.0010812872,0.012204805,0.00078309857],"category_scores_gemma":[0.3990996,0.00041465834,0.0010170026,0.00034853845,0.0045841467,0.000014469484,0.0016553929,0.044958416,0.00008572201],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00085200835,0.00015897,0.00018210312,0.0009801438,0.0004012441,0.00084501965,0.000065724955,5.535433e-7,0.004845979,0.942759,0.0012703793,0.04763889],"study_design_scores_gemma":[0.0011273754,0.0014692404,0.000022306383,0.0008481048,0.000055023233,0.00002087651,0.0000584304,0.000030989933,0.0018709046,0.5978026,0.39644378,0.0002503845],"about_ca_topic_score_codex":0.000047264548,"about_ca_topic_score_gemma":0.00015217536,"teacher_disagreement_score":0.3951734,"about_ca_system_score_codex":0.0004562863,"about_ca_system_score_gemma":0.0071270806,"threshold_uncertainty_score":0.99983054},"labels":[],"label_agreement":null},{"id":"W4256518473","doi":"10.1007/978-1-4939-2877-4_10","title":"Analysis of DNA Supercoiling Induced by DNA–Protein Interactions","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"DNA supercoil; Plasmid; DNA; Biophysics; Linking number; Nucleoid; Agarose gel electrophoresis; Chemistry; Biology; Cell biology; Molecular biology; DNA replication; Gene; Biochemistry","score_opus":0.028400462892408263,"score_gpt":0.3844273073509169,"score_spread":0.35602684445850863,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4256518473","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.81046635,0.0003731819,0.18773125,0.000075268224,0.000094572286,0.000083007515,0.000022862896,0.00000897812,0.0011445236],"genre_scores_gemma":[0.8918946,0.000013643202,0.10742242,0.0001603328,0.00003526585,0.000030045821,0.0002411265,0.00002189205,0.0001806694],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826485,0.00052465516,0.00040181098,0.00045847782,0.00007807395,0.000272112],"domain_scores_gemma":[0.9991126,0.000033496784,0.00012095524,0.0005168466,0.00010591885,0.000110156696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007908226,0.00018712357,0.00039985112,0.00019064343,0.000020741607,0.0000071810405,0.00030600646,0.0003130661,0.00003163135],"category_scores_gemma":[0.0006397733,0.00018791671,0.0002019134,0.0005308981,0.00011936434,0.0000033326494,0.00018132808,0.00017551782,0.000001832423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004669911,0.000079777295,0.002021417,0.000006511422,0.0003656928,0.0000025582137,0.000048488797,0.000038348266,0.9942524,0.000071709066,0.000057346024,0.0030090695],"study_design_scores_gemma":[0.00037409225,0.00013449503,0.000094441195,0.0000064938113,0.00013117254,0.0000034794732,0.00013199124,0.00018938725,0.99325985,0.0003452268,0.0051366673,0.00019268715],"about_ca_topic_score_codex":0.00008101198,"about_ca_topic_score_gemma":0.000022582208,"teacher_disagreement_score":0.08142825,"about_ca_system_score_codex":0.000030060744,"about_ca_system_score_gemma":0.000068098154,"threshold_uncertainty_score":0.7663021},"labels":[],"label_agreement":null},{"id":"W4285048298","doi":"10.1007/978-1-0716-2517-0_18","title":"Biomonitoring of Fungal and Oomycete Plant Pathogens by Using Metabarcoding","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; Agriculture and Agri-Food Canada","funders":"","keywords":"Oomycete; Amplicon; Biology; Environmental DNA; Internal transcribed spacer; Metagenomics; DNA sequencing; Identification (biology); Amplicon sequencing; Biomonitoring; Multiplex; Biodiversity; Computational biology; Ecology; Polymerase chain reaction; Bioinformatics; Ribosomal RNA; 16S ribosomal RNA; Microbiology; Genetics","score_opus":0.02544850041329034,"score_gpt":0.3463302783700577,"score_spread":0.32088177795676737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285048298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8755983,0.008811034,0.11345852,0.000011448468,0.00020446186,0.00014190967,0.0016893849,0.0000069608222,0.00007799722],"genre_scores_gemma":[0.7187508,0.00026825455,0.2803556,0.00012599304,0.000052899068,0.000043677184,0.00035067066,0.0000321417,0.000019964138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801654,0.0009130894,0.00028148096,0.0004166475,0.00007922835,0.00029302388],"domain_scores_gemma":[0.9995199,0.00004897317,0.00011480154,0.0002273297,0.000020782632,0.000068248846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007649225,0.00016495564,0.0002743653,0.00012573545,0.00009703325,0.0000063463913,0.00017688534,0.00009820455,0.000011821711],"category_scores_gemma":[0.00013219005,0.00017132697,0.000090800815,0.00016227817,0.0000923464,0.0000021575952,0.00041989228,0.00013206387,1.0555195e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007375904,0.000046084955,0.019989306,0.000015540578,0.00005118851,0.000036373545,0.000018085815,0.00009346121,0.9760859,0.0001596913,0.000013401864,0.0034172249],"study_design_scores_gemma":[0.0004992231,0.0002946044,0.0007226275,0.000008595838,0.000052766783,0.00016773776,0.00013969299,0.0007237482,0.9910739,0.00019817361,0.0058352235,0.00028369803],"about_ca_topic_score_codex":0.00003545074,"about_ca_topic_score_gemma":0.0000014414773,"teacher_disagreement_score":0.1668971,"about_ca_system_score_codex":0.000017266435,"about_ca_system_score_gemma":0.000040806954,"threshold_uncertainty_score":0.69865113},"labels":[],"label_agreement":null},{"id":"W4285048741","doi":"10.1007/978-1-0716-2241-4_17","title":"Regulation of Molecular Farming Products","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Medicago (Canada)","funders":"Biotechnology and Biological Sciences Research Council; Directorate for Biological Sciences; European Commission","keywords":"Agriculture; Production (economics); Biotechnology; Business; Product (mathematics); Cosmetics; Genetically modified organism; Risk analysis (engineering); Environmental planning; Geography; Biology; Economics; Ecology; Medicine; Gene; Genetics; Mathematics","score_opus":0.019246048068569176,"score_gpt":0.3609265438891071,"score_spread":0.34168049582053794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285048741","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36870134,0.0010161328,0.62899166,0.00022898523,0.00010382258,0.00026959245,0.00003942034,0.000009280307,0.0006397391],"genre_scores_gemma":[0.6609146,0.000020432859,0.3384574,0.00018081728,0.000018383345,0.00011999196,0.00018767637,0.00001705854,0.00008361942],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99833,0.0006621672,0.00029778085,0.00041727905,0.000078494515,0.000214309],"domain_scores_gemma":[0.9993561,0.000020973433,0.0001120227,0.00044016977,0.000042194533,0.00002857086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077239866,0.00012185642,0.00018464668,0.00010651953,0.000058352765,0.0000028934073,0.00027337135,0.00009115208,0.000035022764],"category_scores_gemma":[0.00011588576,0.00013228526,0.00007416559,0.0003007107,0.00008393286,0.0000012455117,0.0001827568,0.00013832742,6.646712e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031362437,0.00006624823,0.00048590923,0.000009890524,0.000025331818,0.0000026991765,0.00002706176,0.0010711234,0.9839791,0.0054866257,0.000028544317,0.008786078],"study_design_scores_gemma":[0.00031153692,0.00015052862,0.0008484208,0.0000022482566,0.000012358177,0.000022906092,0.000035202764,0.0000821092,0.9656806,0.003118316,0.029591566,0.00014421076],"about_ca_topic_score_codex":0.00002014807,"about_ca_topic_score_gemma":0.000002903728,"teacher_disagreement_score":0.2922133,"about_ca_system_score_codex":0.000016044021,"about_ca_system_score_gemma":0.00006691498,"threshold_uncertainty_score":0.5394437},"labels":[],"label_agreement":null},{"id":"W4285049275","doi":"10.1007/978-1-0716-2517-0_12","title":"Rapid Molecular Diagnostics in the Field and Laboratory to Detect Plant Pathogen DNA in Potential Insect Vectors","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Pathogen; Molecular diagnostics; Virology; Computational biology; Microbiology; Genetics","score_opus":0.016947602701474235,"score_gpt":0.2870070547322117,"score_spread":0.2700594520307375,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285049275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99496716,0.0013634616,0.0020332066,0.0009543984,0.00015029332,0.00032149823,0.00013433037,0.000010143805,0.00006547794],"genre_scores_gemma":[0.9759327,0.00016012191,0.018557524,0.0050518014,0.000040078987,0.00020610727,0.00004794814,0.000002478647,0.0000012385452],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966673,0.0022608226,0.0002552115,0.0003759543,0.00010077341,0.00033992436],"domain_scores_gemma":[0.99897027,0.00082026515,0.000047085094,0.00010111152,0.00001189384,0.000049400824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015568756,0.00014921624,0.0002418834,0.00007351467,0.000080331316,0.000017822364,0.0003359239,0.00011381741,0.00006540372],"category_scores_gemma":[0.000525191,0.00007004376,0.00005286353,0.00067120686,0.000036089703,0.00001432319,0.00026031525,0.00034983098,8.831181e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040110972,0.00004400857,0.016510827,0.0000028037848,0.000004116129,0.00045720724,0.00017640331,0.00005167376,0.95158887,0.00023895541,0.000030262985,0.03085479],"study_design_scores_gemma":[0.0013964814,0.004509757,0.27861673,0.000047622114,0.000039545284,0.00017284078,0.0013931987,0.0004216183,0.6133609,0.018494975,0.08020345,0.0013429374],"about_ca_topic_score_codex":0.000102783764,"about_ca_topic_score_gemma":0.00052559073,"teacher_disagreement_score":0.338228,"about_ca_system_score_codex":0.000031977506,"about_ca_system_score_gemma":0.0000137099905,"threshold_uncertainty_score":0.28563017},"labels":[],"label_agreement":null},{"id":"W4285061118","doi":"10.1007/978-1-0716-2477-7_3","title":"R-Loop Detection in Bacteria","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer therapeutics and mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"RNase P; RNA; Plasmid; Biology; DNA; Molecular biology; RNase H; Mutant; Gene; Genetics","score_opus":0.01951560057496013,"score_gpt":0.3699375210738146,"score_spread":0.35042192049885446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285061118","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46819997,0.0007914839,0.52983135,0.00008478935,0.00057093345,0.00018956339,0.000009803209,0.000008061022,0.00031402896],"genre_scores_gemma":[0.732386,0.00014715824,0.2646218,0.0018000307,0.00008691516,0.00045706794,0.00010935468,0.000052337877,0.0003393633],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980519,0.0009898485,0.00022420201,0.0004033263,0.000050455736,0.00028031156],"domain_scores_gemma":[0.99957895,0.000015468258,0.000059022987,0.00029959463,0.000014942586,0.00003201794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010048148,0.00012761656,0.00017034309,0.00015197476,0.000048973132,0.000006081236,0.00021056007,0.00012613446,0.000091409085],"category_scores_gemma":[0.000050616676,0.00014528839,0.00007034847,0.0002397042,0.00003663185,0.0000010125252,0.00026694126,0.00020831634,0.0000012153195],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008964339,0.000045934106,0.00022938222,0.0000028223044,0.000013057517,0.00000923436,0.000024870971,0.00015310972,0.94162333,0.00064794533,0.0000031515735,0.057157546],"study_design_scores_gemma":[0.0006467619,0.0004522847,0.0003410848,0.0000015497596,0.000004885019,0.000026949032,0.00006306195,0.00020035829,0.94447327,0.004085545,0.049525004,0.00017924768],"about_ca_topic_score_codex":0.0000794671,"about_ca_topic_score_gemma":0.00009933392,"teacher_disagreement_score":0.26520956,"about_ca_system_score_codex":0.00006285472,"about_ca_system_score_gemma":0.000048420516,"threshold_uncertainty_score":0.59246886},"labels":[],"label_agreement":null},{"id":"W4285078854","doi":"10.1007/978-1-0716-2237-7_10","title":"A Practical Guide to Using Structural Variants for Genome-Wide Association Studies","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Genome-wide association study; Tassel; Genetic association; Computational biology; Biology; Genotype; Genetics; Computer science; Single-nucleotide polymorphism; Gene","score_opus":0.06537783587140278,"score_gpt":0.44868378871812786,"score_spread":0.3833059528467251,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285078854","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2599721,0.0004964945,0.7373712,0.0011378118,0.00042711524,0.0003429918,0.00009370915,0.000008117551,0.00015047095],"genre_scores_gemma":[0.032234482,0.000029772085,0.9637971,0.0032302756,0.000088037494,0.00006441278,0.000089157635,0.00001407586,0.00045270036],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981791,0.00075022934,0.00024521002,0.00040530626,0.0000848433,0.00033533652],"domain_scores_gemma":[0.9992836,0.00026903223,0.000116136056,0.00018273396,0.00009375883,0.000054700457],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015645159,0.00013322014,0.00023748846,0.00009281544,0.00019302056,0.000012373178,0.0001715785,0.00010900716,0.000024210583],"category_scores_gemma":[0.0036730035,0.00013645986,0.00008828021,0.00012533776,0.00002565234,0.0000015702835,0.00041974065,0.0001090541,8.849324e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104653845,0.000025006784,0.009129264,0.000011169435,0.0001506664,0.0000096890935,0.0001023238,0.0017520576,0.98565936,0.00037030966,0.0022031409,0.0004823516],"study_design_scores_gemma":[0.0033537715,0.0029789605,0.0064608385,0.00001806809,0.00023983185,0.00012304852,0.0032333506,0.0025789945,0.20196082,0.009548454,0.76813644,0.0013674485],"about_ca_topic_score_codex":0.00002409495,"about_ca_topic_score_gemma":0.0000055495857,"teacher_disagreement_score":0.78369856,"about_ca_system_score_codex":0.0000990415,"about_ca_system_score_gemma":0.000080001635,"threshold_uncertainty_score":0.5564672},"labels":[],"label_agreement":null},{"id":"W4285078874","doi":"10.1007/978-1-0716-2237-7_4","title":"Genome-Wide Association Study Statistical Models: A Review","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; University of Guelph","funders":"","keywords":"Genome-wide association study; Statistical model; Computer science; Statistical power; Genetic association; Bayesian probability; Machine learning; Computational biology; Association (psychology); Artificial intelligence; Statistical learning; Biology; Statistics; Genetics; Mathematics; Psychology; Single-nucleotide polymorphism","score_opus":0.08408787039587741,"score_gpt":0.42561987048463445,"score_spread":0.34153200008875706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285078874","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007206571,0.88461226,0.11264653,0.000026266222,0.00021314567,0.0010416502,0.00020672072,0.00001287018,0.0012333414],"genre_scores_gemma":[0.0000011353893,0.9360931,0.061117906,0.0006286916,0.00005592534,0.00026478225,0.0013880895,0.00003872331,0.0004116692],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9927019,0.0049610483,0.00075749663,0.0009203945,0.0001825914,0.0004765745],"domain_scores_gemma":[0.99841416,0.00044156986,0.0004242982,0.00058380037,0.000043462926,0.000092718416],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0032556758,0.000442399,0.0015745949,0.00016857783,0.000096030475,0.00001988616,0.0005991329,0.00044598695,0.00030557765],"category_scores_gemma":[0.0017949616,0.00040750927,0.00037129433,0.00027263846,0.000041367253,0.0000014498629,0.0006461054,0.00050425844,0.000012605625],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037159873,0.0010430802,0.0009845683,0.014605459,0.0016420557,0.00027202454,0.00008203642,0.000053264353,0.0006126591,0.00042539072,0.0039485116,0.9762938],"study_design_scores_gemma":[0.00022360291,0.00044128532,0.000012625443,0.00055745454,0.00054425834,0.000011247128,0.00003462191,0.000003867023,0.0000037812947,0.00041040935,0.9973198,0.00043703677],"about_ca_topic_score_codex":0.000028793289,"about_ca_topic_score_gemma":0.000005847271,"teacher_disagreement_score":0.9933713,"about_ca_system_score_codex":0.000119654476,"about_ca_system_score_gemma":0.00021879168,"threshold_uncertainty_score":0.9998377},"labels":[],"label_agreement":null},{"id":"W4285079054","doi":"10.1007/978-1-0716-2209-4_19","title":"Measurement of Lysosome Positioning by Shell Analysis and Line Scan","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"National Institutes of Health","keywords":"Shell (structure); Lysosome; Line (geometry); Materials science; Mathematics; Physics; Geometry; Nuclear magnetic resonance; Composite material","score_opus":0.013707988878603403,"score_gpt":0.31465057368951593,"score_spread":0.3009425848109125,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285079054","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.308671,0.0038281803,0.68718207,0.000055281726,0.000039619896,0.000086968226,0.000023284876,0.000003399682,0.000110223256],"genre_scores_gemma":[0.90052205,0.00012815611,0.09759923,0.0001485324,0.000014310212,0.000036210462,0.0015024499,0.0000136661665,0.000035406407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99838424,0.00069107005,0.00028459766,0.00035431658,0.00011294591,0.00017280453],"domain_scores_gemma":[0.9995737,0.000009500707,0.0000949917,0.00023107721,0.00005043299,0.00004030228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013686427,0.0001165144,0.00025282698,0.00018657598,0.000058483714,0.0000038586204,0.00012853403,0.00009585069,0.00004764605],"category_scores_gemma":[0.000043047727,0.00012700823,0.00012604808,0.00037180833,0.00008143075,0.0000011153489,0.000106163825,0.000116293755,1.0511861e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000552894,0.000056474542,0.016068658,0.000009112764,0.00020704952,0.0000032331582,0.000030406869,0.00040053672,0.98091674,0.00013813698,0.000002938838,0.0021114168],"study_design_scores_gemma":[0.00047088886,0.00043298563,0.0019257324,0.0000032080352,0.00018456939,0.000006583939,0.000056658835,0.0004761101,0.991155,0.00040994704,0.0047030277,0.00017526431],"about_ca_topic_score_codex":0.00011342297,"about_ca_topic_score_gemma":0.000039088085,"teacher_disagreement_score":0.59185106,"about_ca_system_score_codex":0.000025578625,"about_ca_system_score_gemma":0.000028694876,"threshold_uncertainty_score":0.5179245},"labels":[],"label_agreement":null},{"id":"W4285079110","doi":"10.1007/978-1-0716-2237-7_6","title":"Preparation and Curation of Multiyear, Multilocation, Multitrait Datasets","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Data Analysis with R","field":"Computer Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre de Recherche Industrielle du Québec","funders":"","keywords":"Genome-wide association study; Phenotype; Computer science; Computational biology; Biology; Data mining; Genotype; Genetics; Gene; Single-nucleotide polymorphism","score_opus":0.02503896752802154,"score_gpt":0.4265738108500253,"score_spread":0.4015348433220038,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285079110","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006597704,0.00020271871,0.9927067,0.00014574568,0.00008421335,0.0001576362,0.00004919335,0.000017235243,0.00003881069],"genre_scores_gemma":[0.09482466,0.0000074892073,0.90469396,0.0001298336,0.0000035483981,0.000051292765,0.00027736396,0.000003687576,0.000008151502],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99765736,0.001493975,0.00028586897,0.00036008935,0.00008910075,0.00011358264],"domain_scores_gemma":[0.9991306,0.00015337009,0.00014085973,0.0005170857,0.000034772875,0.000023300257],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015207576,0.000074302734,0.0001566666,0.00020818808,0.00005434507,0.000013591794,0.0004401524,0.000037229314,0.000015973394],"category_scores_gemma":[0.00036722125,0.00007709036,0.000024091072,0.0004322749,0.000053434997,0.00016865919,0.00047166288,0.00010182044,0.000001044529],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016912436,0.00011793925,0.0014744544,0.000011840721,0.000029929199,0.0000059329705,0.0007216033,0.002988788,0.8285379,0.03901327,0.000090045374,0.12699138],"study_design_scores_gemma":[0.00082372274,0.0002594451,0.003848289,0.0000046915807,0.000020633257,0.000020244035,0.00007428939,0.8478879,0.12312927,0.011976049,0.011703613,0.00025187334],"about_ca_topic_score_codex":0.00012975684,"about_ca_topic_score_gemma":0.000025246854,"teacher_disagreement_score":0.84489906,"about_ca_system_score_codex":0.000026210751,"about_ca_system_score_gemma":0.0000313986,"threshold_uncertainty_score":0.31436536},"labels":[],"label_agreement":null},{"id":"W4285079241","doi":"10.1007/978-1-0716-2209-4_7","title":"Imaging Insulin Granule Dynamics in Human Pancreatic β-Cells Using Total Internal Reflection Fluorescence (TIRF) Microscopy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Total internal reflection fluorescence microscope; Granule (geology); Microscope; Fluorescence microscope; Microscopy; Materials science; Biophysics; Optics; Chemistry; Fluorescence; Biology; Physics","score_opus":0.021917373309275456,"score_gpt":0.39686431437272784,"score_spread":0.3749469410634524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285079241","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7168981,0.00043084827,0.28118667,0.00008039873,0.00042062555,0.00022505423,0.0000064366236,0.000028675131,0.0007232054],"genre_scores_gemma":[0.42920378,0.000014598448,0.5699327,0.00054580055,0.000037066,0.000053381755,0.000054301567,0.000028594111,0.00012974987],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974026,0.0012988349,0.00043553716,0.00041063948,0.00010231268,0.0003500613],"domain_scores_gemma":[0.9994055,0.00013168801,0.00011182391,0.0002593722,0.00003059627,0.000061017596],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011398365,0.00017368855,0.00042875658,0.0004886426,0.00009750043,0.000011700886,0.00011537358,0.00007901892,0.00016523522],"category_scores_gemma":[0.00028938908,0.00018206403,0.000091259375,0.000526178,0.00011890436,0.00002706581,0.00016091092,0.00052658253,0.0000022297538],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013526711,0.00012742607,0.06562513,0.000026355054,0.000017787326,0.00008956609,0.00010195439,0.00017131194,0.9285969,0.00031794125,0.0000065131935,0.0047838385],"study_design_scores_gemma":[0.0032997616,0.0005289372,0.002991353,0.00013576316,0.00008374946,0.00032063897,0.00082504994,0.13964894,0.848329,0.003258044,0.00023892685,0.00033981758],"about_ca_topic_score_codex":0.000843618,"about_ca_topic_score_gemma":0.000013558189,"teacher_disagreement_score":0.28874606,"about_ca_system_score_codex":0.0007707877,"about_ca_system_score_gemma":0.0000711324,"threshold_uncertainty_score":0.7424356},"labels":[],"label_agreement":null},{"id":"W4285079371","doi":"10.1007/978-1-0716-2249-0_24","title":"Fluorescent Reporters for Studying Circadian Rhythms in Drosophila melanogaster","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Windsor","funders":"","keywords":"Timeless; Circadian rhythm; Drosophila melanogaster; Circadian clock; Biology; Cell biology; Oscillating gene; CLOCK; Cryptochrome; Period (music); Transcription (linguistics); Repressor; Green fluorescent protein; Transcription factor; Genetics; Gene; Neuroscience","score_opus":0.05734947226478995,"score_gpt":0.37930472164128376,"score_spread":0.3219552493764938,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285079371","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.75772816,0.00083257374,0.23558235,0.0012866054,0.0018317683,0.0015646324,0.000037453996,0.000062178544,0.0010742763],"genre_scores_gemma":[0.83116764,0.00002161109,0.16456518,0.0031167818,0.0000649904,0.00086808944,0.000013427487,0.00005526449,0.00012700153],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99603856,0.0019184698,0.000511059,0.0008045791,0.00012273435,0.0006046191],"domain_scores_gemma":[0.9989164,0.00041430374,0.00014349991,0.00042708826,0.000011734549,0.00008696189],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020690593,0.00018608516,0.0003627293,0.0004561183,0.0001316243,0.000015731635,0.0002821917,0.000105856736,0.000055993052],"category_scores_gemma":[0.0007900473,0.00020410649,0.00012674551,0.0005463587,0.00011242732,0.00003288204,0.00024382437,0.00042862806,0.0000034805068],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052768715,0.00008829349,0.008755129,0.000012160347,0.0000051972984,0.0007165123,0.000698927,0.00035078108,0.9502713,0.027237924,0.000011591527,0.011799403],"study_design_scores_gemma":[0.002714766,0.00050201244,0.0076483334,0.000022195461,0.000017101447,0.0007147825,0.00043218816,0.00220942,0.9378042,0.016474016,0.0308419,0.00061908364],"about_ca_topic_score_codex":0.000024206864,"about_ca_topic_score_gemma":0.0000077550585,"teacher_disagreement_score":0.073439494,"about_ca_system_score_codex":0.0001954498,"about_ca_system_score_gemma":0.00007518824,"threshold_uncertainty_score":0.8323221},"labels":[],"label_agreement":null},{"id":"W4285105807","doi":"10.1007/978-1-0716-1971-1_7","title":"Mycobacterium tuberculosis Infection of THP-1 Cells: A Model for High Content Analysis of Intracellular Growth and Drug Susceptibility","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; University of British Columbia","funders":"","keywords":"Mycobacterium tuberculosis; THP1 cell line; Tuberculosis; Microbiology; Intracellular; Drug; Biology; Virology; Medicine; Cell culture; Pharmacology; Pathology; Cell biology; Genetics","score_opus":0.050202835212745975,"score_gpt":0.3908412932388469,"score_spread":0.34063845802610093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285105807","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5933721,0.0004572326,0.4051326,0.0004943991,0.000052129497,0.00038962575,0.00008221042,0.0000072998832,0.000012377355],"genre_scores_gemma":[0.7723575,0.0002771479,0.22682177,0.00021680885,0.000008527286,0.00016412462,0.00012985306,0.000012194577,0.000012087172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956396,0.002702747,0.00071534724,0.0004886731,0.00011307854,0.00034053245],"domain_scores_gemma":[0.99829865,0.00084714225,0.00021158447,0.00038231545,0.00016584923,0.000094467556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042267055,0.00016044163,0.0010967473,0.00072187575,0.000045157532,0.000001931639,0.00010548652,0.00014236108,0.000052640287],"category_scores_gemma":[0.0016916118,0.00014316049,0.00032003658,0.00074856705,0.00026641932,0.00001889801,0.00022386805,0.0003043125,8.757659e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047251547,0.00024271123,0.14499427,0.00019709587,0.0008606386,0.000002995744,0.00018676787,0.0016675574,0.8477837,0.0021129115,0.000014721427,0.0014641107],"study_design_scores_gemma":[0.0019581174,0.0015646385,0.06171762,0.000014650766,0.0017206798,0.0000094729,0.00013644299,0.19486983,0.72930676,0.0083978,0.00006938768,0.00023461832],"about_ca_topic_score_codex":0.0035425024,"about_ca_topic_score_gemma":0.00017704008,"teacher_disagreement_score":0.19320227,"about_ca_system_score_codex":0.0000883469,"about_ca_system_score_gemma":0.00006451389,"threshold_uncertainty_score":0.58379155},"labels":[],"label_agreement":null},{"id":"W4285113924","doi":"10.1007/978-1-0716-2124-0_12","title":"Integrated Network Discovery Using Multi-Proteomic Data","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brandon University","funders":"","keywords":"Systems biology; Proteome; Computational biology; Biological network; Proteomics; Biology; Reductionism; Computer science; Data science; Bioinformatics; Genetics; Gene","score_opus":0.051906768545549105,"score_gpt":0.38350838275260546,"score_spread":0.33160161420705636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285113924","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06910257,0.0016925371,0.92793655,0.00005022754,0.0006177539,0.00032451132,0.00012347412,0.00001170827,0.00014066648],"genre_scores_gemma":[0.03879726,0.000049544717,0.95840013,0.00092796853,0.00014964268,0.00005384606,0.0014364971,0.00004117367,0.00014396307],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99707675,0.0012695112,0.00045831728,0.0006117201,0.0000703453,0.0005133316],"domain_scores_gemma":[0.99855566,0.00002999077,0.00016921035,0.0011637803,0.000024443334,0.00005689677],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002158209,0.00023222339,0.0003010374,0.00008500708,0.00016651062,0.000029311048,0.0010072815,0.00020231702,0.000036945687],"category_scores_gemma":[0.0001365543,0.00023151997,0.00008791672,0.00030870183,0.00012683216,0.0000066943,0.0023808593,0.00042809104,0.0000015214225],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009511762,0.00006544288,0.0018903111,0.000008611252,0.000085289415,0.0000133977,0.00002596369,0.018449172,0.9668642,0.00084714725,0.00032094528,0.011334401],"study_design_scores_gemma":[0.0055397274,0.0013345929,0.00078940514,0.00005297476,0.00017822473,0.0004357814,0.000726508,0.6474496,0.10974878,0.021540679,0.20949425,0.0027094805],"about_ca_topic_score_codex":0.000103356564,"about_ca_topic_score_gemma":0.000028059352,"teacher_disagreement_score":0.85711545,"about_ca_system_score_codex":0.000055911056,"about_ca_system_score_gemma":0.00015896374,"threshold_uncertainty_score":0.944111},"labels":[],"label_agreement":null},{"id":"W4285122802","doi":"10.1007/978-1-0716-2111-0_25","title":"Methods of SARS-CoV-2 Inactivation","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"Economic and Social Research Council; Biotechnology and Biological Sciences Research Council","keywords":"Virus inactivation; Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Ultraviolet light; Coronavirus disease 2019 (COVID-19); Chemistry; Virology; Biology; Virus; Medicine; Infectious disease (medical specialty)","score_opus":0.10414125858134111,"score_gpt":0.49195621132113804,"score_spread":0.38781495273979694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285122802","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3270901,0.00023282533,0.66954803,0.00013011518,0.00026642473,0.00018831708,0.0000016444855,0.000039300827,0.0025032042],"genre_scores_gemma":[0.095339455,0.0000018979582,0.90209603,0.0024200787,0.000022747214,0.00007495967,0.0000071457102,0.00002229295,0.000015405221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957712,0.0031847102,0.00041149367,0.00031771333,0.00009785209,0.00021702945],"domain_scores_gemma":[0.99889064,0.0005292398,0.00018185782,0.00031677802,0.00006618288,0.000015325544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032092435,0.00012816406,0.00041090813,0.0004344048,0.000056151457,0.0000025678328,0.00011964411,0.000113511705,0.000037021975],"category_scores_gemma":[0.0024654905,0.00012902437,0.00011343247,0.0008034808,0.000088663866,0.000016508546,0.00016388482,0.00043543955,0.0000014265378],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008035493,0.000078465215,0.0012794962,0.000019342577,0.00003359344,0.000020400303,0.00010989566,0.0000066214907,0.90152884,0.0015123718,0.000009901009,0.09532075],"study_design_scores_gemma":[0.0007355048,0.0004187828,0.00031559286,0.000009596023,0.000028941664,0.00013369853,0.00012165206,0.00123611,0.97653115,0.0068070786,0.013555144,0.0001067665],"about_ca_topic_score_codex":0.00014854223,"about_ca_topic_score_gemma":0.0000023740083,"teacher_disagreement_score":0.23254797,"about_ca_system_score_codex":0.00012402632,"about_ca_system_score_gemma":0.00006977924,"threshold_uncertainty_score":0.5261461},"labels":[],"label_agreement":null},{"id":"W4285126487","doi":"10.1007/978-1-0716-2376-3_8","title":"Modeling Collective Invasion and Single-Cell Mesenchymal Invasion in Three-Dimensional Matrigel–Collagen I Cultures","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Matrigel; Mesenchyme; Mesenchymal stem cell; Laminin; Basement membrane; Extracellular matrix; Gentamicin protection assay; In vitro; Cell biology; Cell; Matrix (chemical analysis); Epithelial–mesenchymal transition; Pathology; Biology; Chemistry; Metastasis; Medicine; Cancer; Biochemistry","score_opus":0.04208324680620176,"score_gpt":0.35401085498064944,"score_spread":0.31192760817444765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285126487","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6545297,0.0018527126,0.341772,0.000115869996,0.00021756005,0.00037732147,0.00000631777,0.000053088344,0.0010754068],"genre_scores_gemma":[0.54511476,0.00003261458,0.45453507,0.0000904988,0.000019206833,0.000113739574,0.000014951187,0.00003469583,0.00004446263],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9971859,0.0013054353,0.00036403514,0.0004452212,0.00024191814,0.0004575174],"domain_scores_gemma":[0.99916506,0.0004695999,0.000027916529,0.00021372583,0.000034663113,0.00008904172],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025227747,0.00018740079,0.00031353591,0.00050903484,0.0001076874,0.000016930346,0.0002748554,0.00020564685,0.00011074641],"category_scores_gemma":[0.00068584346,0.00018345166,0.000049164377,0.0008399761,0.00009925393,0.000027252947,0.00072383025,0.0005843111,0.000003101059],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004071847,0.00006196982,0.0011098135,0.000035377005,0.000012915794,0.00007814474,0.00022798196,0.12224073,0.871345,0.0002136382,0.00002766894,0.0046060863],"study_design_scores_gemma":[0.0010395624,0.0002618704,0.00028092111,0.00003380244,0.000007672638,0.000036613685,0.00014517143,0.81707025,0.15494567,0.0253847,0.00045094278,0.00034280634],"about_ca_topic_score_codex":0.0001346759,"about_ca_topic_score_gemma":0.000075154654,"teacher_disagreement_score":0.7163993,"about_ca_system_score_codex":0.00035824048,"about_ca_system_score_gemma":0.00008763208,"threshold_uncertainty_score":0.7480942},"labels":[],"label_agreement":null},{"id":"W4285128175","doi":"10.1007/978-1-0716-2376-3_19","title":"Single-Cell RNA Sequencing Analysis Using Fluidigm C1 Platform for Characterization of Heterogeneous Transcriptomes","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Transcriptome; Computational biology; Workflow; Complementary DNA; Biology; DNA sequencing; RNA-Seq; RNA; Single-cell analysis; cDNA library; Gene; Cell; Gene expression; Genetics; Computer science; Database","score_opus":0.04582943610405381,"score_gpt":0.329889658153312,"score_spread":0.2840602220492582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285128175","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49876547,0.00033325847,0.50039726,0.000008129624,0.00016401283,0.00020441898,0.00008629359,0.0000066904036,0.000034465378],"genre_scores_gemma":[0.74617076,0.000032603642,0.2527296,0.00021120025,0.000040088675,0.00006516304,0.0006715155,0.000040736075,0.000038334114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978793,0.00053837034,0.0005655994,0.00054137,0.00010093174,0.0003744084],"domain_scores_gemma":[0.99923694,0.000045779216,0.00021893744,0.0003679878,0.00007642734,0.0000539206],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008265296,0.00023531473,0.0004893991,0.00036172118,0.0001151975,0.000011529521,0.00031501398,0.00020828129,0.000028696497],"category_scores_gemma":[0.00006092464,0.00026136904,0.00040761303,0.0005427406,0.00009378588,0.0000047191097,0.0000948592,0.00013984309,1.13503184e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020280095,0.00013110734,0.0010391625,0.000041142015,0.0002465021,0.000004653905,0.0001631857,0.0052939677,0.9893999,0.000065226166,6.361578e-7,0.0034117207],"study_design_scores_gemma":[0.0007623756,0.0006268354,0.000030468955,0.0000038249245,0.00023231607,0.000012698262,0.00006116474,0.007993273,0.9883617,0.00023962035,0.0014052123,0.00027046623],"about_ca_topic_score_codex":0.000047334535,"about_ca_topic_score_gemma":0.000013815078,"teacher_disagreement_score":0.24766769,"about_ca_system_score_codex":0.00009744612,"about_ca_system_score_gemma":0.00009482397,"threshold_uncertainty_score":0.99998385},"labels":[],"label_agreement":null},{"id":"W4285128366","doi":"10.1007/978-1-0716-2124-0_5","title":"Protein Purification and Digestion Methods for Bacterial Proteomic Analyses","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Proteome; Computational biology; Extraction (chemistry); Chromatography; Chemistry; Biology; Biochemistry","score_opus":0.04815471487363363,"score_gpt":0.4699312883174653,"score_spread":0.4217765734438316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285128366","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08033254,0.00016989392,0.91809386,0.0002482607,0.00002464905,0.00089464436,0.000033666493,0.00006227415,0.00014022819],"genre_scores_gemma":[0.0070561855,0.000012709139,0.9828798,0.000037270307,0.000028721674,0.009733503,0.0001464135,0.000023746636,0.00008163966],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984937,0.0005730213,0.0002888302,0.000421586,0.00003141078,0.00019148509],"domain_scores_gemma":[0.9993239,0.00013953878,0.00016361344,0.00031154638,0.000030529784,0.000030893378],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001169511,0.00012822943,0.00021645385,0.000095794916,0.00014738452,0.000012645875,0.00018798327,0.00009906236,0.00008249476],"category_scores_gemma":[0.00033767926,0.00013507663,0.000059221824,0.00016217014,0.00007163943,0.000022378663,0.00015308506,0.00022367369,1.7378619e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005674421,0.000032233052,0.000036581696,0.000022869925,0.000010173698,3.6023755e-7,0.000018687513,0.000034686902,0.91693616,0.013099804,0.0000012539626,0.06975044],"study_design_scores_gemma":[0.00024960854,0.000056870744,0.000011619934,0.0000041588905,0.000013131788,0.00000721391,0.000018418974,0.0012857814,0.8675752,0.11985783,0.010787922,0.0001322206],"about_ca_topic_score_codex":0.00002198935,"about_ca_topic_score_gemma":4.6380683e-7,"teacher_disagreement_score":0.10675803,"about_ca_system_score_codex":0.00008467143,"about_ca_system_score_gemma":0.00003138295,"threshold_uncertainty_score":0.5508265},"labels":[],"label_agreement":null},{"id":"W4285130323","doi":"10.1007/978-1-0716-2376-3_1","title":"Overview of the Maintenance of Authentic Cancer Cell Lines","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Cancer cell lines; Psychology; Cancer; Medicine; Internal medicine; Cancer cell","score_opus":0.1378979282399492,"score_gpt":0.5037692114960975,"score_spread":0.36587128325614837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285130323","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000086253,0.9890139,0.008617151,0.000038911425,0.0007424635,0.00072778686,0.00010529814,0.000004311136,0.0007415243],"genre_scores_gemma":[0.0000011283527,0.91543704,0.08365491,0.00014460759,0.00003234944,0.00019579745,0.000018335211,0.00003652069,0.0004793372],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99655294,0.001916904,0.0008131266,0.00036120124,0.00011965458,0.00023615055],"domain_scores_gemma":[0.99820757,0.00029136307,0.0006796265,0.00073906116,0.00004673264,0.000035663703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012443857,0.00025793115,0.0022192213,0.00011758792,0.000015311774,0.0000011046457,0.00037609815,0.00020848487,0.00090203463],"category_scores_gemma":[0.0002832803,0.00015474172,0.00092097605,0.0005974514,0.0001797958,0.0000044953035,0.00031586693,0.0004054902,5.168672e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000105108375,0.00008024154,0.000016808066,0.024120534,0.00015885627,0.00000861435,0.000037617596,0.0000010826269,0.003280576,0.0004376099,0.000044192504,0.97180337],"study_design_scores_gemma":[0.000275945,0.00008652096,0.0000036273343,0.004222654,0.0013313876,0.000019325891,0.000015988888,0.0000020681696,0.004311346,0.00024710846,0.9893601,0.00012391414],"about_ca_topic_score_codex":0.0006248862,"about_ca_topic_score_gemma":0.00004247249,"teacher_disagreement_score":0.9893159,"about_ca_system_score_codex":0.00015436663,"about_ca_system_score_gemma":0.0005124723,"threshold_uncertainty_score":0.9876647},"labels":[],"label_agreement":null},{"id":"W4285130935","doi":"10.1007/978-1-0716-2376-3_13","title":"Manual Immunofluorescence of Formalin-Fixed Paraffin-Embedded Human Tumor Tissues","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Immunofluorescence; Pathology; Indirect immunofluorescence; Primary and secondary antibodies; Antibody; Direct fluorescent antibody; Biology; Computational biology; Medicine; Immunology","score_opus":0.01828572451666261,"score_gpt":0.3923857881389378,"score_spread":0.3741000636222752,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285130935","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84508234,0.002580679,0.15102881,0.000063104206,0.0003042349,0.00025903748,0.000039420385,0.0000141156015,0.0006282462],"genre_scores_gemma":[0.7829545,0.00005855679,0.21579407,0.00048882817,0.000048060603,0.00014592045,0.00020367945,0.000029658955,0.0002767025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973333,0.001192972,0.00049682456,0.00048591977,0.000110363864,0.00038061262],"domain_scores_gemma":[0.9990984,0.00003209919,0.00019558518,0.0005604398,0.00006784875,0.000045613866],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010466769,0.00021155519,0.00035316427,0.00016083599,0.000102705875,0.000007309258,0.0006371052,0.0001253233,0.0001432451],"category_scores_gemma":[0.00012469506,0.00022078914,0.0001624163,0.00019728628,0.0001863123,0.0000032200267,0.0006486276,0.00024496834,0.000003516891],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013400079,0.000105374136,0.0014504321,0.000013494505,0.000053803764,0.00002618806,0.00010368484,0.00015972006,0.99223,0.002033772,0.00012445907,0.0035650972],"study_design_scores_gemma":[0.0005184812,0.0011672179,0.00037158723,0.000007540448,0.000014395137,0.000040617484,0.00024839636,0.000071129965,0.98930365,0.0020481893,0.005958048,0.00025073768],"about_ca_topic_score_codex":0.00010056747,"about_ca_topic_score_gemma":0.000014418058,"teacher_disagreement_score":0.06476527,"about_ca_system_score_codex":0.000024543842,"about_ca_system_score_gemma":0.00006574983,"threshold_uncertainty_score":0.900352},"labels":[],"label_agreement":null},{"id":"W4285132307","doi":"10.1007/978-1-0716-2409-8_21","title":"Isolation of Adult Mouse Neural Stem Cells and Assessment of Self-Renewal by ELDA","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; University of Ottawa","funders":"","keywords":"Subgranular zone; Neural stem cell; Subventricular zone; Neuroscience; Dentate gyrus; Stem cell; Biology; Neurogenesis; Progenitor cell; Neurosphere; Hippocampus; Hippocampal formation; Epigenetics; Adult stem cell; Cell biology; Cellular differentiation; Genetics; Gene","score_opus":0.02923794218513558,"score_gpt":0.35784947427729036,"score_spread":0.32861153209215477,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285132307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7683772,0.000029699411,0.23110582,0.000027565164,0.00019341375,0.00015901556,0.00005014691,0.000014630084,0.000042523152],"genre_scores_gemma":[0.83232975,0.000050591872,0.16717577,0.00037377636,0.0000038441713,0.00002783904,0.0000018582789,0.000017879456,0.000018718189],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959671,0.002961674,0.00035047383,0.0003995395,0.00013767186,0.0001835428],"domain_scores_gemma":[0.99904424,0.00048679786,0.00020742846,0.00020158762,0.00002361526,0.000036314006],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042067614,0.00012236775,0.0002737076,0.00013375947,0.000052416603,0.0000045419965,0.00020243113,0.000050556977,0.00001736436],"category_scores_gemma":[0.0000868919,0.00012280155,0.000051925057,0.0002485118,0.00006660412,0.00001864656,0.00026823778,0.0001852284,1.2060357e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021791424,0.00012071781,0.0005083119,0.000016957165,0.0000037076493,0.000009719056,0.00003806917,0.00029827718,0.9930035,0.0049770214,0.0000030353767,0.0009988756],"study_design_scores_gemma":[0.00033859452,0.00062402437,0.000029043355,0.0000013700318,0.000011154487,0.0000139252015,0.000022592027,0.01146609,0.98703605,0.000281969,0.000085015134,0.00009017645],"about_ca_topic_score_codex":0.00001713354,"about_ca_topic_score_gemma":8.038903e-7,"teacher_disagreement_score":0.06395254,"about_ca_system_score_codex":0.000018091696,"about_ca_system_score_gemma":0.000026299957,"threshold_uncertainty_score":0.50077015},"labels":[],"label_agreement":null},{"id":"W4285135287","doi":"10.1007/978-1-0716-1971-1_4","title":"Assay for Type III Secretion in Escherichia coli","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research","keywords":"Escherichia coli; Secretion; Type (biology); Microbiology; Biology; Genetics; Biochemistry; Ecology; Gene","score_opus":0.039702796887723074,"score_gpt":0.42469187780454226,"score_spread":0.38498908091681916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285135287","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41820735,0.0026597783,0.5758973,0.00044785245,0.00044245465,0.0009096897,0.000023541892,0.000016367538,0.0013957015],"genre_scores_gemma":[0.29840368,0.00024408197,0.69729006,0.0012738319,0.00010763413,0.0016452811,0.00030906106,0.00006261575,0.0006637496],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99623674,0.00234114,0.00030389865,0.00054384646,0.00009727607,0.00047707296],"domain_scores_gemma":[0.99929523,0.0001505684,0.00008053368,0.00034412977,0.00008055173,0.000048958114],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032472257,0.0001768431,0.00029158668,0.00015847961,0.00010699153,0.000008144275,0.0003399326,0.00016992012,0.000042766602],"category_scores_gemma":[0.0014237729,0.00019027341,0.000093958806,0.00049956364,0.00011605245,0.000001819272,0.0005961887,0.00031903785,9.3615614e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032292018,0.0000892961,0.003050303,0.000014316611,0.000041054434,0.000008225104,0.000055990895,0.0003640645,0.99105877,0.0018003095,0.0002021724,0.002992567],"study_design_scores_gemma":[0.004798688,0.0035081832,0.0034524575,0.00001393713,0.000030437051,0.000015708141,0.00069729454,0.005807534,0.5673167,0.011740475,0.4016531,0.00096546084],"about_ca_topic_score_codex":0.0000731063,"about_ca_topic_score_gemma":0.000081512575,"teacher_disagreement_score":0.42374206,"about_ca_system_score_codex":0.00008730186,"about_ca_system_score_gemma":0.00015192777,"threshold_uncertainty_score":0.77591246},"labels":[],"label_agreement":null},{"id":"W4285137216","doi":"10.1007/978-1-0716-2261-2_12","title":"Design and Fabrication of Biological Wires for Cardiac Fibrosis Disease Modeling","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network; University of Toronto","funders":"National Heart, Lung, and Blood Institute; Canadian Institutes of Health Research","keywords":"Fibrosis; Context (archaeology); Cardiac fibrosis; Disease; Medicine; Human disease; Cardiac function curve; Neuroscience; Pathology; Cardiology; Biology; Heart failure","score_opus":0.06545553505175122,"score_gpt":0.4019319190134977,"score_spread":0.33647638396174645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285137216","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08103508,0.013630182,0.90451574,0.00030211342,0.00012655744,0.00036536634,0.000008820237,0.000013281475,0.0000028438906],"genre_scores_gemma":[0.2441089,0.00007358707,0.7554882,0.00003215335,0.000030268173,0.00018888188,0.00003536679,0.000008100147,0.00003450948],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9988988,0.0005984991,0.0001598202,0.00019216123,0.000038654445,0.000112056136],"domain_scores_gemma":[0.9995663,0.00020395564,0.000030273348,0.00011790459,0.00003215731,0.000049384304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086518377,0.000074063915,0.00026732142,0.00010378467,0.00003273969,8.117032e-7,0.0000385999,0.00004076178,0.0000065012036],"category_scores_gemma":[0.00052047,0.00005742184,0.000047344904,0.000117599746,0.00006204333,0.0000036162503,0.000044194305,0.000089552894,3.831362e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016685396,0.0000323513,0.0017009346,0.000037712067,0.000030477742,0.0000033013994,0.00008983876,0.02720968,0.95457435,0.0016312746,0.000011528092,0.014511705],"study_design_scores_gemma":[0.0020663894,0.002537249,0.0024801178,0.000055236436,0.00019001281,0.0000135899345,0.00023255446,0.7698839,0.21203455,0.0059864405,0.0042305784,0.0002894059],"about_ca_topic_score_codex":0.000007715867,"about_ca_topic_score_gemma":1.6399724e-8,"teacher_disagreement_score":0.7426742,"about_ca_system_score_codex":0.00002251475,"about_ca_system_score_gemma":0.00002500359,"threshold_uncertainty_score":0.23415947},"labels":[],"label_agreement":null},{"id":"W4285146117","doi":"10.1007/978-1-0716-2409-8_2","title":"Examining Mitochondrial Morphology in Mouse Brains","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Mitochondrion; Cell biology; mitochondrial fusion; Biology; Neuroscience; Mitochondrial fission; Organelle; Hippocampal formation; Mitochondrial DNA; Biochemistry; Gene","score_opus":0.03465722348540157,"score_gpt":0.3549430561292223,"score_spread":0.3202858326438207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285146117","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4532968,0.00062869897,0.5415974,0.00020629428,0.002055982,0.0004071027,0.000036816844,0.00002452035,0.0017463601],"genre_scores_gemma":[0.057352703,0.000086627086,0.9331487,0.0049962476,0.00043082252,0.0007837509,0.00057433796,0.0001019279,0.0025249114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9937746,0.004149746,0.0005208359,0.0008949602,0.000091614565,0.00056822185],"domain_scores_gemma":[0.9990492,0.00011208767,0.00012945032,0.0006031069,0.000028936644,0.00007723731],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013192475,0.00025547782,0.0004058678,0.00040419083,0.00009396671,0.000008330519,0.00045771198,0.000357066,0.00040783777],"category_scores_gemma":[0.00077667774,0.00029082122,0.000113843256,0.0004001943,0.00016102794,0.0000025635607,0.00061640015,0.00056349504,0.00000896024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028167627,0.000112071946,0.00588874,0.0000039410734,0.000018650391,0.00010973586,0.00009183478,0.000895663,0.9882113,0.0013429619,0.0003213023,0.0027221215],"study_design_scores_gemma":[0.0044268505,0.0021826865,0.00065257854,0.0000043052614,0.000014705842,0.00041514897,0.0004882481,0.000215178,0.84652585,0.0028987646,0.14138731,0.0007883798],"about_ca_topic_score_codex":0.000077442855,"about_ca_topic_score_gemma":0.000084928804,"teacher_disagreement_score":0.39594412,"about_ca_system_score_codex":0.000065089225,"about_ca_system_score_gemma":0.000107956774,"threshold_uncertainty_score":0.9999544},"labels":[],"label_agreement":null},{"id":"W4285149540","doi":"10.1007/978-1-0716-2115-8_23","title":"Data Sharing and Reuse: A Method by the AIRR Community","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Metadata; Reuse; Interoperability; Computer science; Data curation; Data format; Medicine; Information retrieval; Data mining; World Wide Web; Engineering; Computer hardware","score_opus":0.07992763149191406,"score_gpt":0.41702029752259423,"score_spread":0.33709266603068017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285149540","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15467215,0.003575825,0.8400689,0.0007026,0.0002013517,0.00021461988,0.00015957716,0.000013746944,0.0003912262],"genre_scores_gemma":[0.08609097,0.00021300295,0.90894115,0.0031902702,0.000056472374,0.000110518886,0.0011324795,0.000054820975,0.00021030102],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9944422,0.004393848,0.00026241364,0.00054805435,0.00006815654,0.00028530345],"domain_scores_gemma":[0.99762535,0.00014764475,0.00007437573,0.002087946,0.000019019872,0.00004564943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0050389525,0.00016665655,0.00021618669,0.000048366837,0.00034639076,0.000021448363,0.002163732,0.00013293709,0.000021636091],"category_scores_gemma":[0.00059805805,0.00014211741,0.000047615464,0.00017067097,0.00016771197,0.0000026358048,0.003984367,0.00066149386,3.343877e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000055490902,0.00007230529,0.0030721405,0.000008271412,0.000045246117,0.000003551383,0.00012349855,0.000039956984,0.9831849,0.00033056398,0.00059264246,0.012471459],"study_design_scores_gemma":[0.00197744,0.0010403376,0.0005806785,0.000010145842,0.0000900378,0.00026837806,0.0009806599,0.007830519,0.53149015,0.015935162,0.43898848,0.0008080495],"about_ca_topic_score_codex":0.000496154,"about_ca_topic_score_gemma":0.00007856339,"teacher_disagreement_score":0.45169476,"about_ca_system_score_codex":0.000018285886,"about_ca_system_score_gemma":0.000035678728,"threshold_uncertainty_score":0.579538},"labels":[],"label_agreement":null},{"id":"W4285149996","doi":"10.1007/978-1-0716-1979-7_36","title":"Designing Genetically Engineered Mouse Models (GEMMs) Using CRISPR Mediated Genome Editing","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"CRISPR; Genome editing; Cas9; Biology; Computational biology; Genome; Embryonic stem cell; Genetics; Gene","score_opus":0.026190015472952927,"score_gpt":0.388640501076041,"score_spread":0.36245048560308807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285149996","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13120127,0.002310014,0.8656462,0.000040278257,0.0002854852,0.0002677166,0.000032411346,0.000037066624,0.00017956023],"genre_scores_gemma":[0.2392841,0.00006112706,0.7597928,0.00031546515,0.00014412035,0.00010290455,0.0001812512,0.00007889591,0.00003934767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996993,0.00097178284,0.0005031599,0.0007081352,0.00015268274,0.0006712225],"domain_scores_gemma":[0.999127,0.000075436765,0.00009774184,0.00051058026,0.000062295076,0.00012696873],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014722777,0.00031669863,0.00036244345,0.0002541011,0.00013915494,0.000018353769,0.00046831102,0.00023465576,0.000056369696],"category_scores_gemma":[0.0003700449,0.00037232594,0.00014742538,0.00034391644,0.00007990692,0.0000035947155,0.00061690086,0.00039797515,0.0000013087655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020032205,0.000028530978,0.000110803034,0.000009783855,0.00004266121,0.000018410366,0.000057914487,0.29877773,0.70000803,0.0001437851,0.0000069515813,0.0007753601],"study_design_scores_gemma":[0.0006835222,0.0002628502,0.000028974862,0.000004604115,0.000030794887,0.00006975883,0.00018739325,0.113045916,0.8812437,0.00074149703,0.0032094968,0.0004914558],"about_ca_topic_score_codex":0.0000275923,"about_ca_topic_score_gemma":0.000003925071,"teacher_disagreement_score":0.18573181,"about_ca_system_score_codex":0.00007265455,"about_ca_system_score_gemma":0.000087056826,"threshold_uncertainty_score":0.99987286},"labels":[],"label_agreement":null},{"id":"W4285150038","doi":"10.1007/978-1-0716-2273-5_9","title":"Inducing Global Expression of Actinobacterial Biosynthetic Gene Clusters","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Actinobacteria; Streptomyces; Biology; Gene; Gene cluster; Gene expression; Bacteria; Computational biology; Transcription (linguistics); Genetics","score_opus":0.022670733731133978,"score_gpt":0.3654715951437832,"score_spread":0.3428008614126492,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285150038","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9712128,0.0003913014,0.02630885,0.0008015086,0.0006792,0.00029817648,0.000034588862,0.00001904751,0.00025452394],"genre_scores_gemma":[0.6212843,0.000010535695,0.37828308,0.00032708634,0.0000470903,0.0000031466166,0.00001924835,0.000009134525,0.00001640261],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977563,0.0012341539,0.0003236491,0.00036423042,0.00008686616,0.00023480743],"domain_scores_gemma":[0.99939764,0.000077381475,0.00013609117,0.00031276385,0.000030702566,0.00004539989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010327274,0.0001296173,0.00037904232,0.00012233331,0.00005176744,0.0000030920744,0.00016006069,0.00012372895,0.00030657998],"category_scores_gemma":[0.00050169433,0.00010564222,0.00010360481,0.0003397875,0.00009073553,0.000012048909,0.00032477643,0.00024571552,9.273674e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003558768,0.00008739468,0.00055013434,0.000024168363,0.000018516137,0.000025687841,0.000047574675,0.000010293821,0.9740323,0.000072068244,0.000023484088,0.024752531],"study_design_scores_gemma":[0.00055391307,0.00026923526,0.00036709712,0.000021799853,0.000032111016,0.000114501796,0.000059680016,0.00001956182,0.99561083,0.00034216617,0.0025035536,0.00010552826],"about_ca_topic_score_codex":0.00007026849,"about_ca_topic_score_gemma":0.0000011585208,"teacher_disagreement_score":0.35197422,"about_ca_system_score_codex":0.000112407455,"about_ca_system_score_gemma":0.0000611945,"threshold_uncertainty_score":0.43079647},"labels":[],"label_agreement":null},{"id":"W4285150126","doi":"10.1007/978-1-0716-2449-4_2","title":"Lambda Red Recombineering in Shigella flexneri","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Shigellosis; Recombineering; Shigella flexneri; Shigella; Homologous recombination; Biology; Genetics; Diarrheal disease; Gene; Genome; Microbiology; Virology; Computational biology; Diarrhea; Medicine; Escherichia coli","score_opus":0.025544621515211578,"score_gpt":0.40756799447193676,"score_spread":0.38202337295672517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285150126","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7372182,0.0062628384,0.24441977,0.0013898931,0.0008082313,0.0008519409,0.000021206986,0.00004692925,0.008980972],"genre_scores_gemma":[0.34450287,0.0004530504,0.6523241,0.00088426424,0.00008211561,0.0008369917,0.00010881585,0.00007421868,0.0007335643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962756,0.002172921,0.00033481058,0.00057957595,0.0001063859,0.0005306747],"domain_scores_gemma":[0.999323,0.000078355195,0.000062191575,0.00045084074,0.000030834763,0.00005479409],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021377862,0.00019194426,0.00030231528,0.00021731849,0.000079422316,0.000008388025,0.00044018676,0.0001391595,0.00006394238],"category_scores_gemma":[0.00078918523,0.00021141193,0.00009129404,0.00051121763,0.00010236778,0.000001640973,0.0011097022,0.00044671746,0.0000014800652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094882285,0.000076223325,0.009006914,0.000011328788,0.000032383417,0.000051356536,0.000051277315,0.00065709226,0.98369354,0.0006297384,0.00010482402,0.005590468],"study_design_scores_gemma":[0.0031340215,0.0018317929,0.0076983403,0.000020173926,0.000014857841,0.000068283676,0.00057281076,0.0019153698,0.69116235,0.00866233,0.28381947,0.0011002319],"about_ca_topic_score_codex":0.00007622761,"about_ca_topic_score_gemma":0.00007521402,"teacher_disagreement_score":0.40790433,"about_ca_system_score_codex":0.00008554416,"about_ca_system_score_gemma":0.00008092083,"threshold_uncertainty_score":0.8621128},"labels":[],"label_agreement":null},{"id":"W4285150486","doi":"10.1007/978-1-0716-2257-5_14","title":"Deep Mutational Scanning of Protein–Protein Interactions Between Partners Expressed from Their Endogenous Loci In Vivo","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre hospitalier de l'Université Laval; Centre hospitalier universitaire de Québec; PROTEO; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Cas9; Protein-fragment complementation assay; Complementation; Genome editing; Computational biology; Biology; Gene; Mutant; Genome; Protein–protein interaction; Genetics","score_opus":0.030589259048526732,"score_gpt":0.40357880878622127,"score_spread":0.37298954973769455,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285150486","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4851316,0.0007445458,0.5135887,0.000034164987,0.000049043058,0.0002308404,0.000053419357,0.0000056663584,0.00016200091],"genre_scores_gemma":[0.7915359,0.0000048720135,0.20782562,0.000036041994,0.000044091707,0.0003085818,0.00020003713,0.000022650234,0.000022191442],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99799955,0.00083724887,0.00039447128,0.00041367442,0.00007860332,0.0002764488],"domain_scores_gemma":[0.9994342,0.00007630459,0.0001109024,0.00030308857,0.000032039068,0.00004346642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005672695,0.00017208687,0.00027566322,0.000172669,0.00005045311,0.000005326096,0.00027017275,0.000110688234,0.000091838985],"category_scores_gemma":[0.00019164031,0.00018907558,0.00010062489,0.00021822157,0.00007549093,0.0000023604412,0.0002640312,0.00025356875,3.7415933e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044267985,0.00004804198,0.0018488299,0.0000092965365,0.000053940326,0.000011705548,0.00026247202,0.017072132,0.9755151,0.00009979681,0.0000024755143,0.0050319335],"study_design_scores_gemma":[0.0005211213,0.00013804065,0.00040081434,0.000011088172,0.000008564762,0.000006918861,0.00033434125,0.000726736,0.992547,0.0023182696,0.0027991424,0.00018800679],"about_ca_topic_score_codex":0.00021082834,"about_ca_topic_score_gemma":0.00003915708,"teacher_disagreement_score":0.30640432,"about_ca_system_score_codex":0.00004132168,"about_ca_system_score_gemma":0.000062618936,"threshold_uncertainty_score":0.77102786},"labels":[],"label_agreement":null},{"id":"W4285150975","doi":"10.1007/978-1-0716-2409-8_15","title":"Using Single-Molecule Fluorescence Microscopy to Uncover Neuronal Vulnerability to Protein Damage","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heat shock proteins research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Proteostasis; Cell biology; Biology; Hsp70; Heat shock protein; Neurodegeneration; Aggresome; Protein aggregation; Autophagy; Biochemistry; Apoptosis; Disease","score_opus":0.05242704578356841,"score_gpt":0.440835271048483,"score_spread":0.3884082252649146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285150975","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.544505,0.00007352605,0.4537011,0.00033925267,0.00011835166,0.0010419892,0.0000410555,0.00001338554,0.00016633674],"genre_scores_gemma":[0.22315006,0.0000010927678,0.774167,0.0017133891,0.00006730477,0.0005986926,0.00005545295,0.00006899017,0.00017803854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99212325,0.0048352825,0.0004977451,0.0013163481,0.00029142248,0.00093594566],"domain_scores_gemma":[0.99834895,0.000056849985,0.000068554546,0.0011026794,0.00012333348,0.00029962123],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.002765215,0.0003356745,0.00038556714,0.00033134274,0.00023366234,0.000036342673,0.00093398604,0.00020891956,0.00014268662],"category_scores_gemma":[0.0020184915,0.00037625543,0.00013964163,0.00091562583,0.0001573924,0.0000043601804,0.002324072,0.0005856813,0.000011560285],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003198397,0.00020732725,0.00092418154,0.000018412953,0.00001943539,0.000045243058,0.00005101075,0.0026166628,0.99156284,0.000138568,0.00006285692,0.004033604],"study_design_scores_gemma":[0.00041319642,0.0015333331,0.00021629017,0.0000097921575,0.0000049430278,0.000021746375,0.00003349269,0.00031982447,0.9788443,0.00037889412,0.017827842,0.00039634807],"about_ca_topic_score_codex":0.00021596898,"about_ca_topic_score_gemma":0.0000309625,"teacher_disagreement_score":0.32135493,"about_ca_system_score_codex":0.00026274938,"about_ca_system_score_gemma":0.00032265863,"threshold_uncertainty_score":0.9998689},"labels":[],"label_agreement":null},{"id":"W4285152522","doi":"10.1007/978-1-0716-2409-8_13","title":"Immuno-MALDI-MS for Accurate Quantitation of Targeted Peptides from Volume-Restricted Samples","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Jewish General Hospital; McGill University","funders":"","keywords":"Chromatography; Workflow; Automation; Chemistry; Protocol (science); Computer science; Volume (thermodynamics); Engineering; Database; Medicine; Physics","score_opus":0.03682938057925389,"score_gpt":0.4041495366654423,"score_spread":0.3673201560861884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285152522","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16648202,0.00047059555,0.83207846,0.00008421244,0.000031279716,0.00024005104,0.00047050163,0.000048389484,0.00009451815],"genre_scores_gemma":[0.08524631,0.000034633817,0.91273063,0.00004707681,0.000012848934,0.0010280593,0.0008344286,0.00002227476,0.000043727854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988467,0.00023338005,0.00038293973,0.00030652163,0.00004713854,0.00018331844],"domain_scores_gemma":[0.9989142,0.00040892194,0.00025155966,0.00034454183,0.00006110337,0.000019702371],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003119281,0.00011830316,0.0002501344,0.0000842714,0.0000893237,0.000005078193,0.00030780243,0.000107082575,0.00021959294],"category_scores_gemma":[0.00045352834,0.00013144324,0.00009437315,0.00023250518,0.000072031005,0.000019120233,0.00015316224,0.00019659585,4.5466217e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059175774,0.000045133358,0.000848804,0.0000134711145,0.00002492012,6.709686e-7,0.000046508037,0.00058491924,0.9823069,0.009624629,0.000021473365,0.00642337],"study_design_scores_gemma":[0.00030882927,0.00006709303,0.00020173557,0.000005311487,0.00001511922,0.0000010178009,0.00011361143,0.0028731131,0.8795546,0.10657075,0.010150857,0.00013794105],"about_ca_topic_score_codex":0.0004033562,"about_ca_topic_score_gemma":0.0000059418285,"teacher_disagreement_score":0.102752306,"about_ca_system_score_codex":0.000054082906,"about_ca_system_score_gemma":0.00003621209,"threshold_uncertainty_score":0.53600997},"labels":[],"label_agreement":null},{"id":"W4285158361","doi":"10.1007/978-1-0716-2099-1_35","title":"Photochemical Internalization as a New Strategy to Enhance Efficacy of Antimicrobial Agents Against Intracellular Infections","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Intracellular; Antimicrobial; Intracellular parasite; Antibiotics; Gentamicin; Internalization; Microbiology; Staphylococcus aureus; Biology; In vivo; Chemistry; Cell; Cell biology; Bacteria; Biochemistry; Biotechnology","score_opus":0.01415671684427243,"score_gpt":0.3690431333874901,"score_spread":0.3548864165432177,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285158361","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5069085,0.00048900105,0.49022725,0.00018372222,0.0005247847,0.00065339427,0.000030278416,0.000039175357,0.0009439219],"genre_scores_gemma":[0.95286745,0.000046735713,0.041048612,0.0028209023,0.000035817367,0.00012435179,0.0009628253,0.000043624124,0.0020496564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99753916,0.0011825392,0.00044315163,0.0004700662,0.000027830562,0.0003372227],"domain_scores_gemma":[0.99936885,0.00007838829,0.00015916368,0.00030630702,0.000038541373,0.000048748912],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046497933,0.0002031686,0.0003463564,0.00029283168,0.00009158269,0.0000080496,0.00040384574,0.00017488343,0.0010260994],"category_scores_gemma":[0.0003658359,0.00021440952,0.0001463999,0.00050481013,0.0001118434,0.000021771879,0.00049517606,0.00036421552,0.00005788298],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018452252,0.00036713702,0.00042249632,0.000012136713,0.00015169798,0.000014486875,0.00030180358,0.0006582295,0.9838752,0.0016034628,0.0034814894,0.008927321],"study_design_scores_gemma":[0.0009328175,0.00032724728,0.00006730418,0.00001880042,0.00004985376,0.000018305458,0.00009002013,0.000010610652,0.9443629,0.0005079765,0.05339142,0.0002227525],"about_ca_topic_score_codex":0.00022560643,"about_ca_topic_score_gemma":0.00000953042,"teacher_disagreement_score":0.44917864,"about_ca_system_score_codex":0.000082548184,"about_ca_system_score_gemma":0.00010410767,"threshold_uncertainty_score":0.9998871},"labels":[],"label_agreement":null},{"id":"W4285158568","doi":"10.1007/978-1-0716-2124-0_15","title":"Comprehensive Interactome Mapping of Nuclear Receptors Using Proximity Biotinylation","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"Canadian Institutes of Health Research","keywords":"Interactome; Biotinylation; Computational biology; Nuclear receptor; Biology; Nuclear transport; Protein–protein interaction; Receptor; Cell biology; Estrogen receptor alpha; Estrogen receptor; Cell nucleus; Genetics; Molecular biology; Nucleus; Cancer; Transcription factor; Gene; Breast cancer","score_opus":0.09883415654622524,"score_gpt":0.44037628414546864,"score_spread":0.3415421275992434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285158568","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00026332308,0.9634012,0.034371585,0.000009777159,0.00091496727,0.0006442966,0.000029674658,0.000014575656,0.000350587],"genre_scores_gemma":[0.0000074948416,0.75159574,0.24796526,0.00005680115,0.000052787767,0.000021464164,0.00021742542,0.000060160204,0.000022866807],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9948754,0.0030521536,0.00089308404,0.0007356327,0.00008871432,0.0003550674],"domain_scores_gemma":[0.99858147,0.00013994068,0.00067077467,0.0004974777,0.00006403406,0.000046286194],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007591508,0.00044948643,0.0014526295,0.00040292653,0.000090082794,0.000007793145,0.00042221253,0.00094089075,0.00008001292],"category_scores_gemma":[0.00034947772,0.00040042793,0.0005557076,0.0005413741,0.00027189348,0.0000024064516,0.00083931495,0.000713948,0.0000020632808],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028628358,0.00011595656,0.000038828322,0.0038745392,0.0008236067,0.0000130514245,0.00014721509,0.000018456733,0.17203707,0.00020300313,0.000045275625,0.82265437],"study_design_scores_gemma":[0.00019145804,0.0001842393,0.000002223164,0.0007130058,0.00015723941,0.000044981032,0.00013028836,0.000031697902,0.0020104868,0.00008371846,0.9960529,0.00039771345],"about_ca_topic_score_codex":0.000026096053,"about_ca_topic_score_gemma":9.832717e-7,"teacher_disagreement_score":0.9960077,"about_ca_system_score_codex":0.00008775415,"about_ca_system_score_gemma":0.000115358846,"threshold_uncertainty_score":0.99984473},"labels":[],"label_agreement":null},{"id":"W4285159444","doi":"10.1007/978-1-0716-2409-8_8","title":"Direct FACS Isolation of Neural Stem/Progenitor Lineages from the Adult Brain","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Isolation (microbiology); Progenitor; Neural stem cell; Progenitor cell; Neuroscience; Biology; Stem cell; Cell biology; Bioinformatics","score_opus":0.04678695908010875,"score_gpt":0.3637630429005856,"score_spread":0.3169760838204768,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285159444","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.79737896,0.000113490656,0.20045649,0.0005360658,0.0010215576,0.00029233782,0.00011018488,0.000034454635,0.000056467885],"genre_scores_gemma":[0.9499269,0.0000213308,0.04484548,0.0049233884,0.000058201407,0.00011208376,0.000008351459,0.000038834853,0.00006541925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9916235,0.0070816795,0.00036164455,0.00052012654,0.00016525805,0.00024777817],"domain_scores_gemma":[0.9963753,0.0030066853,0.00018296088,0.00037589975,0.000026188447,0.00003296659],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070138864,0.00015724331,0.00026970016,0.00009050584,0.00016423906,0.00001208384,0.000527723,0.000059279682,0.00005587551],"category_scores_gemma":[0.0016784004,0.0001232286,0.00011328613,0.00043894784,0.000102258455,0.000022241495,0.00038636668,0.00028069396,0.0000021273027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005549576,0.00005375345,0.0006727189,0.0000027978808,0.000004580384,0.000029518586,0.00009623127,0.0004135613,0.9930027,0.002030943,0.000017009143,0.003620693],"study_design_scores_gemma":[0.0002607665,0.0002868465,0.00024662123,0.0000021167534,0.000011336909,0.000015196163,0.000046500525,0.0054062004,0.9920659,0.00054064416,0.0010064904,0.00011139489],"about_ca_topic_score_codex":0.00005159245,"about_ca_topic_score_gemma":0.0000045880747,"teacher_disagreement_score":0.15561101,"about_ca_system_score_codex":0.00001705495,"about_ca_system_score_gemma":0.000024289693,"threshold_uncertainty_score":0.5025116},"labels":[],"label_agreement":null},{"id":"W4285159856","doi":"10.1007/978-1-0716-2376-3_5","title":"Processing and Cryopreservation of Blood, Cancer Tissues, and Cancer Cells for Viable Biobanking","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Genomics and Diagnostics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"British Columbia Children's Hospital; Institute of Cancer Research; University of Calgary","funders":"","keywords":"Biobank; Cryopreservation; Tissue bank; Cancer; Biorepository; Cancer cell lines; Cancer cell; Biological materials; Computational biology; Biology; Medicine; Bioinformatics; Biomedical engineering; Internal medicine; Cell biology","score_opus":0.020620725707314765,"score_gpt":0.3772154504279922,"score_spread":0.35659472472067744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285159856","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6954856,0.06576632,0.2376222,0.00021537485,0.00023421251,0.00043962224,0.00018405543,0.000004835317,0.000047790392],"genre_scores_gemma":[0.34396613,0.006774734,0.6469638,0.00091416313,0.0001439591,0.0009457547,0.00011484904,0.000054476113,0.00012217821],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990746,0.00015919782,0.00020467606,0.00033617107,0.00003863495,0.00018671593],"domain_scores_gemma":[0.9996089,0.000052781917,0.00011894446,0.00013578858,0.000054242886,0.000029368754],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049657543,0.00010729182,0.00019116396,0.00006803219,0.00007802006,0.000009386334,0.000105722065,0.0000895109,0.000013122812],"category_scores_gemma":[0.00009464284,0.00011705859,0.000028802133,0.000108003966,0.000086139975,0.0000020580376,0.00025073762,0.00007384715,1.1394893e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005650175,0.000026264886,0.0057985587,0.00007240051,0.00003096063,8.928213e-7,0.00006361927,0.000747039,0.95358074,0.00030782545,0.000037670015,0.03927754],"study_design_scores_gemma":[0.0007049601,0.00027791027,0.00020342357,0.000015070641,0.000055465858,0.0000040174587,0.00005279196,0.0011194696,0.9541406,0.0021232984,0.041142017,0.00016096653],"about_ca_topic_score_codex":0.0005139875,"about_ca_topic_score_gemma":0.00008952841,"teacher_disagreement_score":0.40934154,"about_ca_system_score_codex":0.00001534991,"about_ca_system_score_gemma":0.000092262766,"threshold_uncertainty_score":0.47735107},"labels":[],"label_agreement":null},{"id":"W4285160017","doi":"10.1007/978-1-0716-2409-8_4","title":"Performing Single-Cell Clonal Analysis in the Mouse Brain Using Mosaic Analysis with Double Markers (MADM)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Neuroscience; ENCODE; Brain Cell; Biology; Brain function; Function (biology); Gene; Somatic cell; Computational biology; Genetics","score_opus":0.02762986088457024,"score_gpt":0.32551608922989245,"score_spread":0.2978862283453222,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285160017","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62136185,0.00040108702,0.37763765,0.00010208968,0.000042058437,0.0001900164,0.000023619712,0.0000065062654,0.00023510882],"genre_scores_gemma":[0.7803567,0.00001538833,0.21780583,0.0009995648,0.00003173134,0.0000760463,0.00055908057,0.000034821183,0.000120840465],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99571425,0.002321515,0.0004719491,0.00075963326,0.00019953998,0.00053313066],"domain_scores_gemma":[0.9989527,0.00012114053,0.00016896884,0.0006546211,0.000043007134,0.000059580696],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026598305,0.00029852125,0.0005296737,0.00074288965,0.00019290498,0.000034617595,0.0006111944,0.00019579785,0.000072478484],"category_scores_gemma":[0.000059225025,0.00024603345,0.00040142523,0.002865814,0.00016732638,0.0000049143,0.00019960571,0.00044323417,3.2136742e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004879312,0.0002507208,0.058954682,0.000008934055,0.0007760228,0.000036906113,0.00020301862,0.060932465,0.87747276,0.000053850377,0.0000099396175,0.0008127837],"study_design_scores_gemma":[0.0058302786,0.002289979,0.0026158572,0.000007455273,0.003236938,0.000089620204,0.0024336425,0.062311716,0.9087781,0.0002927147,0.010506381,0.0016073401],"about_ca_topic_score_codex":0.000702132,"about_ca_topic_score_gemma":0.0006961442,"teacher_disagreement_score":0.15983182,"about_ca_system_score_codex":0.00009883863,"about_ca_system_score_gemma":0.000097199336,"threshold_uncertainty_score":0.99999917},"labels":[],"label_agreement":null},{"id":"W4285164101","doi":"10.1007/978-1-0716-2409-8_3","title":"Investigating Microglial Ultrastructural Alterations and Intimate Relationships with Neuronal Stress, Dystrophy, and Degeneration in Mouse Models of Alzheimer’s Disease","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":29,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of British Columbia; Université Laval; Simon Fraser University; University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Microglia; Neurodegeneration; Neuroscience; Ultrastructure; Biology; Pathology; Amyloid (mycology); Disease; Medicine; Inflammation; Anatomy; Immunology","score_opus":0.06085830479215347,"score_gpt":0.3342700758566591,"score_spread":0.2734117710645056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285164101","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8412415,0.000051103743,0.1580138,0.00023989631,0.00006016095,0.00028598678,0.00007884343,0.000017876746,0.000010844507],"genre_scores_gemma":[0.7891611,0.000012796276,0.21042556,0.00027728226,0.0000082302,0.00006627993,0.000027276432,0.000014943184,0.000006533552],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996243,0.002660611,0.00037591337,0.00044076785,0.00011607847,0.00016361766],"domain_scores_gemma":[0.9994015,0.00019578042,0.0001517952,0.00015504949,0.000021584661,0.000074269214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039344234,0.00014029832,0.00017424587,0.00025059062,0.00021008133,0.000030005642,0.00009428222,0.00003495744,0.000007896772],"category_scores_gemma":[0.0003648013,0.00013969555,0.000018736951,0.00025981944,0.00017364595,0.00012953492,0.00011655537,0.0003124779,1.03636474e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026016625,0.000018096203,0.002421712,0.000006959603,0.0000014123711,0.000011219751,0.00015908136,0.051488407,0.90177786,0.04382719,4.1515443e-7,0.0002616456],"study_design_scores_gemma":[0.00043407374,0.000096434625,0.00082214194,0.000003932703,0.000009516063,0.000028872953,0.000029205705,0.11934524,0.8696983,0.009416835,0.0000028878808,0.000112598296],"about_ca_topic_score_codex":0.000010218265,"about_ca_topic_score_gemma":0.000017052504,"teacher_disagreement_score":0.06785683,"about_ca_system_score_codex":0.0000150564665,"about_ca_system_score_gemma":0.000056910998,"threshold_uncertainty_score":0.5696619},"labels":[],"label_agreement":null},{"id":"W4285166601","doi":"10.1007/978-1-0716-2124-0_4","title":"Rodent Lung Tissue Sample Preparation and Processing for Shotgun Proteomics","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"Canadian Institutes of Health Research","keywords":"Shotgun; Shotgun proteomics; Sample (material); Proteomics; Computer science; Computational biology; Biology; Chromatography; Chemistry; Biochemistry","score_opus":0.022928015666057396,"score_gpt":0.4354249692660452,"score_spread":0.4124969535999878,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285166601","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.024838457,0.0004172121,0.97370154,0.00015023447,0.000013280665,0.0006177026,0.00004749565,0.000050168233,0.00016390212],"genre_scores_gemma":[0.018346095,0.000012771029,0.97724956,0.000091799295,0.000018301671,0.004106721,0.00009831321,0.000019012614,0.00005744709],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991933,0.000092138594,0.00019930546,0.00031989958,0.000032765896,0.00016255307],"domain_scores_gemma":[0.9995705,0.00009817966,0.00009758714,0.00018802857,0.000023280034,0.000022421405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045730206,0.00009271814,0.00014138577,0.00004267097,0.00018241254,0.000015033872,0.00013280117,0.000076462726,0.000037446083],"category_scores_gemma":[0.00013471859,0.000103180486,0.00002403111,0.00009118264,0.00005012547,0.00001865397,0.00015554398,0.00015902102,5.6999863e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030789186,0.000024108269,0.0002665148,0.000046962523,0.000003883035,4.4553602e-7,0.00010347174,0.0003089494,0.96293926,0.0063881143,0.0000047209173,0.029882759],"study_design_scores_gemma":[0.00018245801,0.000048850303,0.000002718421,0.000004631745,0.00000817209,0.0000083952955,0.000036944904,0.013915755,0.8682023,0.09830567,0.019163074,0.000120991754],"about_ca_topic_score_codex":0.000023132185,"about_ca_topic_score_gemma":0.0000030103793,"teacher_disagreement_score":0.09473695,"about_ca_system_score_codex":0.000079506885,"about_ca_system_score_gemma":0.000035685138,"threshold_uncertainty_score":0.4207578},"labels":[],"label_agreement":null},{"id":"W4285167648","doi":"10.1007/978-1-0716-2376-3_4","title":"Breast Cancer Xenograft Murine Models","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University; Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Nod; Breast cancer; Cancer; Xenotransplantation; Immune system; Human breast; Cancer research; Medicine; Immunology; Biology; In vivo; Transplantation; Internal medicine","score_opus":0.037375152506013365,"score_gpt":0.4220144163795707,"score_spread":0.38463926387355735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285167648","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0513104,0.008878108,0.93055236,0.0034832961,0.0007833719,0.00052841986,0.0001731486,0.00006161958,0.004229247],"genre_scores_gemma":[0.08672433,0.00054867595,0.9072713,0.003855799,0.00011697791,0.00056388613,0.000056942023,0.00005272582,0.00080933457],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99831235,0.00067529525,0.0002375615,0.00035715787,0.00010249578,0.00031514853],"domain_scores_gemma":[0.9994587,0.000044935947,0.000057888836,0.00032190804,0.000034125456,0.0000824446],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0008387413,0.00013423526,0.0003726228,0.00020106438,0.000054420034,0.0000032466673,0.00010456366,0.00005946643,0.0014341943],"category_scores_gemma":[0.00001787814,0.00012409463,0.00012965674,0.00041408776,0.000071483344,0.000012784715,0.00022466845,0.00033632727,0.0000017592753],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036133846,0.0002482658,0.0028333536,0.000052932646,0.0001421737,0.00029088795,0.00018218976,0.002807562,0.6671066,0.0040783626,0.00029292787,0.32160342],"study_design_scores_gemma":[0.014129578,0.0019029701,0.0055098403,0.00011364304,0.00085734355,0.0056767897,0.00085308315,0.014473012,0.3591246,0.06099286,0.53460604,0.001760258],"about_ca_topic_score_codex":0.00079685845,"about_ca_topic_score_gemma":0.000024631998,"teacher_disagreement_score":0.5343131,"about_ca_system_score_codex":0.00015297286,"about_ca_system_score_gemma":0.00011783453,"threshold_uncertainty_score":0.99947864},"labels":[],"label_agreement":null},{"id":"W4285167682","doi":"10.1007/978-1-0716-2124-0_17","title":"Proteomic Profiling of the Interplay Between a Bacterial Pathogen and Host Uncovers Novel Anti-Virulence Strategies","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Virulence; Profiling (computer programming); Pathogen; Biology; Host (biology); Microbiology; Computational biology; Genetics; Gene; Computer science","score_opus":0.01408798329177757,"score_gpt":0.3447963821325373,"score_spread":0.33070839884075975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285167682","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9148229,0.000017043549,0.084259026,0.000074885735,0.00023934068,0.00029733524,0.000102046804,0.0000055184414,0.00018192957],"genre_scores_gemma":[0.7891765,0.000004510468,0.21067257,0.00006614476,0.0000108674885,0.000041545074,0.000007518534,0.000008083796,0.000012244826],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987195,0.0006047359,0.00021178668,0.00025395985,0.000045228076,0.00016479005],"domain_scores_gemma":[0.99961776,0.000056913243,0.000118307194,0.00018379421,0.0000037375983,0.000019509424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005651889,0.0000971579,0.00016922767,0.000033055887,0.000090221125,0.00001341422,0.00026374444,0.000051309573,0.00022037342],"category_scores_gemma":[0.00006067762,0.000076903496,0.00005143366,0.00016665348,0.00023770767,0.000054117685,0.00075071986,0.00022454352,0.0000011429519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013708601,0.0000229709,0.020157844,0.00000454193,0.000010311265,0.0000011757579,0.0001585757,0.00009085182,0.9781574,0.00012801954,0.0000012206197,0.0012533611],"study_design_scores_gemma":[0.0002615082,0.00012359714,0.07856548,0.000009626139,0.000016889087,0.00001685834,0.00021262228,0.000051753042,0.91900355,0.00040907625,0.0012063356,0.00012273442],"about_ca_topic_score_codex":0.00042201456,"about_ca_topic_score_gemma":0.000016345932,"teacher_disagreement_score":0.12641354,"about_ca_system_score_codex":0.00006840706,"about_ca_system_score_gemma":0.000023686625,"threshold_uncertainty_score":0.31360337},"labels":[],"label_agreement":null},{"id":"W4285169583","doi":"10.1007/978-1-0716-1979-7_22","title":"In Situ Quantification and Isolation of Müller Glial Cells by Fluorescence-Activated Cell Sorting from the Regenerating Larval Zebrafish Retina","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Cell sorting; Muller glia; Retina; Zebrafish; Biology; Cell biology; Population; Cell; Molecular biology; Transcriptome; In situ hybridization; Flow cytometry; Genetics; Neuroscience; Gene expression; Stem cell; Progenitor cell; Gene","score_opus":0.013435776719088395,"score_gpt":0.30895889742218996,"score_spread":0.29552312070310155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285169583","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9377406,0.0010667917,0.06034939,0.0002630387,0.0001457368,0.00021606794,0.000015009737,0.000004074344,0.00019923889],"genre_scores_gemma":[0.84502006,0.00009710097,0.15425546,0.00021409827,0.000023393868,0.000041160947,0.00029532524,0.000015116838,0.000038271744],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99757856,0.0013966769,0.00037394566,0.0003851318,0.00007620901,0.0001894641],"domain_scores_gemma":[0.99944985,0.00009516842,0.00020550303,0.00020027852,0.000029351859,0.000019867355],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011153935,0.00012581906,0.00016994363,0.000051351864,0.000087663524,0.000010306185,0.00018171038,0.00012523515,0.00001747704],"category_scores_gemma":[0.00022982029,0.00011529676,0.00004038377,0.0001966357,0.0000877877,0.0000041703884,0.00019967476,0.00018574874,2.867433e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101677295,0.00004052522,0.007896614,0.0000052119603,0.000008843574,0.0000011804093,0.00019386115,0.00015328864,0.9895853,0.00008811104,0.00020262181,0.0017227988],"study_design_scores_gemma":[0.00044582624,0.00010603129,0.0011848261,0.0000051043558,0.0000057981883,0.0000010786141,0.00032997396,0.00047922373,0.9956866,0.00044195258,0.0011776807,0.00013589239],"about_ca_topic_score_codex":0.00019767364,"about_ca_topic_score_gemma":0.000027792077,"teacher_disagreement_score":0.093906075,"about_ca_system_score_codex":0.000016014856,"about_ca_system_score_gemma":0.000041312625,"threshold_uncertainty_score":0.47016656},"labels":[],"label_agreement":null},{"id":"W4285172378","doi":"10.1007/978-1-0716-2409-8_11","title":"Superresolution Imaging of Cytoskeletal Networks in Fixed Brain Tissue","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Cytoskeleton; Microscopy; Fluorescence microscope; Biophysics; Biology; Fluorescence; Optics; Cell; Physics; Biochemistry","score_opus":0.008944405538461233,"score_gpt":0.3926937494105481,"score_spread":0.38374934387208687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285172378","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.053556073,0.0024229551,0.94326514,0.00015988448,0.00013725653,0.00028260873,0.000012594686,0.00001607848,0.00014742605],"genre_scores_gemma":[0.27149633,0.000053724463,0.72767437,0.00040587128,0.000026106885,0.0001379333,0.00014586872,0.00002999868,0.000029790752],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99713,0.0015442298,0.0003935912,0.00048401678,0.000064378124,0.00038381008],"domain_scores_gemma":[0.9993848,0.000056381217,0.00010842211,0.00039194743,0.000027459495,0.000030986517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013627394,0.0001700867,0.00027503783,0.00020185011,0.000045014625,0.0000033628694,0.0003585229,0.00014059841,0.00002941768],"category_scores_gemma":[0.00033418954,0.00019856631,0.0000721542,0.00034719222,0.0001950735,0.0000031666852,0.0005308398,0.00032193577,2.4406313e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006691958,0.00005776392,0.009651931,0.000006467881,0.0000066053276,0.000018497134,0.000028156152,0.0024019992,0.9709763,0.00056529976,0.00007036008,0.016149705],"study_design_scores_gemma":[0.00043769492,0.00029665336,0.00064914476,0.000008659099,0.0000036532133,0.000029014825,0.00006743951,0.0019540326,0.9873544,0.0016467916,0.007334496,0.00021799828],"about_ca_topic_score_codex":0.00008530285,"about_ca_topic_score_gemma":0.000024802595,"teacher_disagreement_score":0.21794027,"about_ca_system_score_codex":0.0000648332,"about_ca_system_score_gemma":0.000048994596,"threshold_uncertainty_score":0.80972993},"labels":[],"label_agreement":null},{"id":"W4285174216","doi":"10.1007/978-1-0716-2099-1_28","title":"Controlling Immunoregulatory Cell Activity for Effective Photodynamic Therapy of Cancer","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photodynamic Therapy Research Studies","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"National Cancer Institute","keywords":"Context (archaeology); Photodynamic therapy; Cancer research; Adjuvant; Cancer; Cell; Myeloid; Cancer cell; Immunology; Myeloid-derived Suppressor Cell; Medicine; Myeloid cells; Suppressor; Biology; Chemistry; Internal medicine; Biochemistry","score_opus":0.01822573914265982,"score_gpt":0.4367524488247239,"score_spread":0.41852670968206407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285174216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84798163,0.010353626,0.1391024,0.00011843436,0.0001778223,0.0020811562,0.000064642656,0.000017319015,0.0001029662],"genre_scores_gemma":[0.9368466,0.0005838955,0.05887374,0.00024591925,0.000019111778,0.0033076268,0.000012881364,0.000036248028,0.00007398221],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972133,0.0017365529,0.00023467191,0.00034759517,0.00011861949,0.00034925342],"domain_scores_gemma":[0.9985233,0.0009153205,0.00014215801,0.00030228542,0.000081083665,0.00003586733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002005215,0.00016539983,0.00065874244,0.0002340701,0.000090162386,0.0000018312952,0.00017138157,0.00008189388,0.000050975657],"category_scores_gemma":[0.00018418477,0.00014520322,0.00021710614,0.00026754514,0.00020696865,0.000010776739,0.00013120087,0.0003605332,1.1056947e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030758143,0.00022073195,0.0009171572,0.000047243906,0.00029806522,0.0000074001496,0.00020058194,0.00020526678,0.9125544,0.00007134074,0.000002761025,0.082399234],"study_design_scores_gemma":[0.0057331757,0.0015857274,0.0057711992,0.000012579121,0.000026853431,0.000003887126,0.00008878268,0.0028022337,0.9806736,0.0018088843,0.0013626335,0.00013041013],"about_ca_topic_score_codex":0.00039481983,"about_ca_topic_score_gemma":0.000016390517,"teacher_disagreement_score":0.08886497,"about_ca_system_score_codex":0.00030196813,"about_ca_system_score_gemma":0.00013707615,"threshold_uncertainty_score":0.59212154},"labels":[],"label_agreement":null},{"id":"W4285176314","doi":"10.1007/978-1-0716-2376-3_12","title":"An End-to-End Workflow for Interrogating Tumor-Infiltrating Myeloid Cells Using Mass Cytometry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Mass cytometry; Myeloid; Myeloid cells; Flow cytometry; Cancer research; Immune system; Biology; Immunology","score_opus":0.028534706017796434,"score_gpt":0.3839002402520807,"score_spread":0.35536553423428424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285176314","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16982411,0.0015632383,0.8244308,0.000065943845,0.0030606322,0.000648689,0.00007293673,0.00007167023,0.00026197507],"genre_scores_gemma":[0.26024783,0.0000030115193,0.73799497,0.0011600457,0.00004796207,0.00028411418,0.00010130239,0.0000649476,0.000095808806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9933425,0.0041016764,0.0007263113,0.0008530285,0.000049507267,0.0009269509],"domain_scores_gemma":[0.99804676,0.00088837836,0.00028890505,0.00066582806,0.00006815265,0.000041986652],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0037560011,0.00034821106,0.00063626096,0.00057940086,0.00041067196,0.000022495733,0.00083274045,0.0002688591,0.00100964],"category_scores_gemma":[0.0004998684,0.00038919432,0.00019093379,0.0007325421,0.00023233569,0.000052508865,0.0004767361,0.0009301398,0.000013757487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015436597,0.00007024552,0.00066548784,0.000022351154,0.00009443744,0.000021013662,0.0006410067,0.0030249557,0.962708,0.00037881837,0.00002339824,0.032195907],"study_design_scores_gemma":[0.00094704714,0.00063881645,0.000030839714,0.000025837118,0.00003925607,0.00009458122,0.001501327,0.0011430704,0.9846273,0.0017399479,0.0087694395,0.0004425045],"about_ca_topic_score_codex":0.00011169676,"about_ca_topic_score_gemma":0.000013073817,"teacher_disagreement_score":0.090423726,"about_ca_system_score_codex":0.0003541601,"about_ca_system_score_gemma":0.00014014657,"threshold_uncertainty_score":0.99990356},"labels":[],"label_agreement":null},{"id":"W4285178459","doi":"10.1007/978-1-0716-2124-0_1","title":"Review of the Real and Sometimes Hidden Costs in Proteomics Experimental Workflows","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Workflow; Computer science; Proteomics; Data science; Computational biology; Biology; Database","score_opus":0.017939799445561323,"score_gpt":0.40010193271765015,"score_spread":0.3821621332720888,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285178459","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55868375,0.09336128,0.3351756,0.0018563571,0.000093845694,0.002907356,0.000092270595,0.00008243561,0.0077470792],"genre_scores_gemma":[0.008010754,0.0030484013,0.98714256,0.00045168647,0.0000058251258,0.0012841561,0.000010159295,0.000013172134,0.00003329648],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99904263,0.00033586434,0.00025245274,0.00021037579,0.000037697166,0.00012097226],"domain_scores_gemma":[0.9994963,0.000063809646,0.000111951675,0.00030482485,0.000008838497,0.000014291321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005572354,0.00008180458,0.00019933356,0.00003472975,0.00003804143,0.0000016292339,0.00025107374,0.000056624827,0.00008485696],"category_scores_gemma":[0.00007559215,0.000070013055,0.00004380513,0.00020084927,0.00009288055,0.0000072910675,0.0004234625,0.00025330813,8.556235e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008354753,0.000041179464,0.0010621082,0.00010204912,0.00000346172,0.0000010963265,0.000030728646,0.000003728238,0.9817627,0.0050449995,0.000007803693,0.011931754],"study_design_scores_gemma":[0.00015967803,0.000021394499,0.00002516262,0.00019111714,0.0000038409835,0.0000075017088,0.000054938235,0.0000605918,0.98487616,0.011704113,0.002810974,0.00008456172],"about_ca_topic_score_codex":0.00005485531,"about_ca_topic_score_gemma":0.0000018813378,"teacher_disagreement_score":0.6519669,"about_ca_system_score_codex":0.000096847085,"about_ca_system_score_gemma":0.00002465027,"threshold_uncertainty_score":0.28550497},"labels":[],"label_agreement":null},{"id":"W4285180054","doi":"10.1007/978-1-0716-2124-0_3","title":"Isolation of Detergent Insoluble Proteins from Mouse Brain Tissue for Quantitative Analysis Using Data Independent Acquisition (DIA)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Children's Hospital; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Chromatography; Centrifugation; Chemistry; Extraction (chemistry); Mass spectrometry; Protein purification; Digestion (alchemy); Brain tissue; Isolation (microbiology); Biochemistry; Biology; Bioinformatics","score_opus":0.07198696735131258,"score_gpt":0.4601208528096941,"score_spread":0.38813388545838157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285180054","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1581462,0.000145033,0.8404149,0.00008534023,0.00001619591,0.00029201838,0.00077569776,0.000024139614,0.000100477744],"genre_scores_gemma":[0.23180133,0.000004356553,0.76611376,0.00004293251,0.000010213977,0.00028152482,0.001710458,0.000013382075,0.000022016478],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99845356,0.00042873077,0.00038179665,0.00047232173,0.00009549169,0.00016811336],"domain_scores_gemma":[0.99869007,0.0002482602,0.00026903593,0.00072192244,0.000044426437,0.000026310625],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0009550703,0.00011179591,0.00030401663,0.0002758627,0.00008027046,0.000008120358,0.0004387096,0.00010836071,0.00097093976],"category_scores_gemma":[0.00018418244,0.00012824473,0.00008262471,0.0006216767,0.0000367314,0.00003278402,0.00043011972,0.00015866052,1.8224223e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040741907,0.00010790743,0.0010092317,0.0000146180855,0.00016422698,9.598795e-7,0.0000747802,0.0009824464,0.9905935,0.0053814845,0.0000066383113,0.0016234906],"study_design_scores_gemma":[0.000230858,0.000093347146,0.000077864155,0.0000029008143,0.00012773952,7.929963e-7,0.00014173055,0.08296111,0.8984486,0.016933644,0.0008492196,0.00013223494],"about_ca_topic_score_codex":0.0006411709,"about_ca_topic_score_gemma":0.0000654273,"teacher_disagreement_score":0.092144914,"about_ca_system_score_codex":0.0001261016,"about_ca_system_score_gemma":0.000034122982,"threshold_uncertainty_score":0.9999423},"labels":[],"label_agreement":null},{"id":"W4285180736","doi":"10.1007/978-1-0716-2376-3_9","title":"CellTrace™ Violet Flow Cytometric Assay to Assess Cell Proliferation","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Flow cytometry; Chemistry; Biology; Molecular biology","score_opus":0.020161113414264253,"score_gpt":0.3875909959632724,"score_spread":0.36742988254900816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285180736","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.052395534,0.00069611677,0.9435364,0.00013757795,0.00010326659,0.0004974437,0.0000129774235,0.000040008916,0.002580699],"genre_scores_gemma":[0.18696654,0.0000500029,0.8096006,0.0017773666,0.00007539301,0.0005282619,0.00033475066,0.000051135532,0.0006159295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947718,0.0032929336,0.0004508154,0.00085245335,0.00017670236,0.00045532532],"domain_scores_gemma":[0.99878645,0.000084959705,0.00013817141,0.0007857049,0.000100690115,0.000104013285],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0035541633,0.0002617645,0.0003608616,0.0007599188,0.00012151661,0.000029866991,0.0005865068,0.00021719775,0.00014775908],"category_scores_gemma":[0.0006600826,0.00028756433,0.00018507557,0.0013942657,0.00005386455,0.0000034648876,0.00071630895,0.00036095484,0.000009022267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045384637,0.00016256694,0.00275445,0.000008861049,0.00002924013,0.000023705064,0.00003060444,0.0013966744,0.97772354,0.00004809665,0.0010588698,0.016718026],"study_design_scores_gemma":[0.0002861901,0.0005414417,0.000153424,0.0000018368817,0.000025727877,0.000017660283,0.000045230347,0.0010826684,0.9404351,0.0004373598,0.05664652,0.00032681876],"about_ca_topic_score_codex":0.000029531346,"about_ca_topic_score_gemma":0.000012072347,"teacher_disagreement_score":0.134571,"about_ca_system_score_codex":0.000094091585,"about_ca_system_score_gemma":0.00009223753,"threshold_uncertainty_score":0.9999576},"labels":[],"label_agreement":null},{"id":"W4285181826","doi":"10.1007/978-1-0716-2124-0_21","title":"DIA Proteomics and Machine Learning for the Fast Identification of Bacterial Species in Biological Samples","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Identification (biology); Computational biology; Proteomics; Biology; Computer science; Ecology; Biochemistry","score_opus":0.04250142076148393,"score_gpt":0.3465038938695095,"score_spread":0.3040024731080256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285181826","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55882955,0.0028799225,0.4375042,0.00015791703,0.0001522452,0.00039725588,0.000051738574,0.0000026718435,0.00002452883],"genre_scores_gemma":[0.81005317,0.0012690452,0.18788579,0.00006566214,0.00005516313,0.00039058502,0.00020357236,0.000014214126,0.00006278312],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982948,0.0008230302,0.00033484516,0.00032091947,0.00003747242,0.00018893662],"domain_scores_gemma":[0.99945384,0.000177617,0.00015191207,0.00017659807,0.000025888512,0.000014137804],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001840385,0.000114550734,0.000249078,0.00009872883,0.000099011944,0.000007872354,0.00019485869,0.00008256444,0.000015901582],"category_scores_gemma":[0.00096924044,0.00008771575,0.00006530273,0.00014790457,0.00017425648,0.0000011717437,0.0003837197,0.00015530325,5.0166722e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015018099,0.000033595246,0.012362061,0.000007910504,0.000034169752,4.6073734e-7,0.00006249476,0.00013707526,0.979249,0.0034904864,0.0000039686424,0.0044686124],"study_design_scores_gemma":[0.0008734196,0.0006003242,0.018386621,0.000001833608,0.000017046745,0.000007992577,0.00039674132,0.00046916216,0.94740254,0.0038617067,0.027803315,0.00017928315],"about_ca_topic_score_codex":0.000028971832,"about_ca_topic_score_gemma":0.000033135417,"teacher_disagreement_score":0.25122365,"about_ca_system_score_codex":0.000013819546,"about_ca_system_score_gemma":0.000019171295,"threshold_uncertainty_score":0.35769445},"labels":[],"label_agreement":null},{"id":"W4285182616","doi":"10.1007/978-1-0716-2409-8_17","title":"In Vitro Brain Organoids and Computational Models to Study Cell Death in Brain Diseases","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Organoid; Neuroscience; Computer science; Computational biology; Computational model; Biology; Artificial intelligence","score_opus":0.03119146941698974,"score_gpt":0.3942579475119558,"score_spread":0.36306647809496606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285182616","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5193297,0.00019861117,0.4795262,0.00049107353,0.00005615207,0.00028399663,0.0000114986005,0.000021616004,0.000081115584],"genre_scores_gemma":[0.6296851,0.0000020960451,0.3695963,0.00052169815,0.0000070398146,0.00014393928,0.000012000828,0.000020126756,0.000011664275],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99682015,0.0020569926,0.0002812488,0.00033771203,0.00015778358,0.0003461068],"domain_scores_gemma":[0.99860096,0.0011156963,0.000013555442,0.00016509574,0.00001160833,0.0000930907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022159119,0.0001235759,0.00024622545,0.0005512874,0.000028345885,0.000010195825,0.00026168182,0.00006208225,0.000054222153],"category_scores_gemma":[0.000578177,0.00013781738,0.000021290405,0.00072638574,0.000042192572,0.000020217476,0.00050124613,0.0004214539,0.0000014812579],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000073766925,0.00039607336,0.016837945,0.00003976068,0.000020710548,0.00033607308,0.0013854257,0.36233526,0.5996041,0.0010071349,0.000069151814,0.017894566],"study_design_scores_gemma":[0.0037865217,0.00063625776,0.036547825,0.000014581686,0.000008554207,0.000017586186,0.00071307144,0.80035335,0.04235418,0.11376694,0.0010977018,0.0007034096],"about_ca_topic_score_codex":0.000101570884,"about_ca_topic_score_gemma":0.000009189407,"teacher_disagreement_score":0.55724996,"about_ca_system_score_codex":0.00014472898,"about_ca_system_score_gemma":0.000044216118,"threshold_uncertainty_score":0.56200296},"labels":[],"label_agreement":null},{"id":"W4285182793","doi":"10.1007/978-1-0716-2409-8_14","title":"Three-Dimensional Atlas of the Human Amygdala Subnuclei Constructed Using Immunohistochemical and Ultrahigh-Field Magnetic Resonance Imaging Data","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Functional Brain Connectivity Studies","field":"Neuroscience","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Amygdala; Basolateral amygdala; Neuroscience; Psychology; Autism; Magnetic resonance imaging; Brain atlas; Functional magnetic resonance imaging; Human brain; Temporal lobe; Medicine; Psychiatry; Epilepsy","score_opus":0.04868643035614593,"score_gpt":0.3669168614905287,"score_spread":0.31823043113438276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285182793","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97060037,0.003083972,0.02409137,0.0013049269,0.00045666218,0.0002642148,0.00007111972,0.000020478972,0.00010685874],"genre_scores_gemma":[0.79546374,0.0000058193827,0.20204386,0.002400001,0.000021317279,0.000025100471,0.0000071291865,0.000023180904,0.000009850398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973864,0.0013355234,0.00026877754,0.00062873744,0.00015690314,0.00022366809],"domain_scores_gemma":[0.9956838,0.0035122093,0.00011534042,0.0006432899,0.00002589706,0.000019461286],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008511132,0.00013240166,0.00023926186,0.00008579569,0.00031803278,0.000007012422,0.00059099484,0.000046268804,0.00005789245],"category_scores_gemma":[0.0062086736,0.00011652731,0.000041719377,0.0003661282,0.00079308276,0.000031007075,0.0020033945,0.0003997455,1.8080289e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030091684,0.000026492024,0.011987354,0.000004699886,0.0000032103449,0.000012216041,0.000024447727,0.000026138701,0.9811693,0.0038177422,0.00007059709,0.0028277459],"study_design_scores_gemma":[0.0007773826,0.0001450948,0.010160263,0.000022921497,0.000026770804,0.000330335,0.000051887902,0.009515847,0.95445883,0.022228438,0.0020145315,0.00026771147],"about_ca_topic_score_codex":0.00024047056,"about_ca_topic_score_gemma":0.000013515758,"teacher_disagreement_score":0.17795248,"about_ca_system_score_codex":0.00004989655,"about_ca_system_score_gemma":0.000052407413,"threshold_uncertainty_score":0.74328107},"labels":[],"label_agreement":null},{"id":"W4285189441","doi":"10.1007/978-1-0716-2376-3_17","title":"The Use of Seahorse XF Assays to Interrogate Real-Time Energy Metabolism in Cancer Cell Lines","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Aquatic life and conservation","field":"Agricultural and Biological Sciences","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Seahorse; Anaerobic glycolysis; Anaerobic exercise; Cellular respiration; Respiration; Biology; Warburg effect; Metabolism; Cancer cell; Extracellular; Cell; Glycolysis; Biochemistry; Anaerobic respiration; Cell culture; Lactic acid; Cell biology; Mitochondrion; Cancer; Physiology; Genetics; Bacteria; Anatomy; Zoology","score_opus":0.06275752911029196,"score_gpt":0.3515281050210029,"score_spread":0.2887705759107109,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285189441","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99229044,0.0005278883,0.004370344,0.0022755398,0.0001684763,0.00016276538,0.000025978728,0.000012190898,0.00016639322],"genre_scores_gemma":[0.6802879,0.0019247271,0.30399048,0.008863335,0.00026439442,0.0013306062,0.0001486342,0.000011027811,0.0031788768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970268,0.0021628167,0.0003016229,0.00022425604,0.00007927076,0.0002052336],"domain_scores_gemma":[0.99907804,0.00066173647,0.00010357874,0.00008968578,0.000036220485,0.00003075655],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010777401,0.000094159914,0.0002066538,0.000022033137,0.00007071455,0.000010025022,0.00028634735,0.00006150218,0.00018364254],"category_scores_gemma":[0.00020079371,0.000037363574,0.000060531198,0.00045594331,0.000045485067,0.00002663998,0.00025574295,0.000093319366,0.0000010827224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036993642,0.000036395802,0.0010806463,8.691455e-7,0.0000066222947,0.000002679552,0.00009713162,0.00028770242,0.8980189,0.0011360605,0.000088089124,0.09920794],"study_design_scores_gemma":[0.00058174506,0.0008128447,0.033139262,0.000022388476,0.000046589263,0.0000050174626,0.00123668,0.010984929,0.51883066,0.013604975,0.4201172,0.0006177352],"about_ca_topic_score_codex":0.022038272,"about_ca_topic_score_gemma":0.0060091745,"teacher_disagreement_score":0.4200291,"about_ca_system_score_codex":0.000037110127,"about_ca_system_score_gemma":0.00001684692,"threshold_uncertainty_score":0.98447406},"labels":[],"label_agreement":null},{"id":"W4285189492","doi":"10.1007/978-1-0716-2409-8_1","title":"Monitoring Mitochondrial Respiration in Mouse Cerebellar Granule Neurons","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Granule (geology); Respiration; Cell biology; Mitochondrion; Chemistry; Neuroscience; Biology; Anatomy","score_opus":0.027717735367857786,"score_gpt":0.35541197237879113,"score_spread":0.32769423701093336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285189492","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52272046,0.00076864916,0.47184956,0.00024985988,0.0030602056,0.0004950291,0.000025946492,0.000025995667,0.00080431136],"genre_scores_gemma":[0.094628885,0.00022103367,0.8989864,0.0017906236,0.0009927687,0.0009106244,0.00034781112,0.00012874212,0.001993089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9950617,0.0032794725,0.00044032253,0.0007083227,0.000100333295,0.00040982993],"domain_scores_gemma":[0.9992254,0.000056129677,0.000108035885,0.00051634345,0.000031642972,0.00006246641],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091444526,0.00020793645,0.00027659384,0.00029272772,0.00011484588,0.000011367521,0.00032354452,0.0002502423,0.00009865987],"category_scores_gemma":[0.000473347,0.00023940632,0.00011673978,0.0003520476,0.000078710844,0.0000031877544,0.00035227014,0.00044509306,0.0000051777224],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025069425,0.00008415778,0.0072330334,0.000004208654,0.00001006766,0.000033207416,0.000060691174,0.0018164561,0.98624885,0.00043602585,0.00008285058,0.0037397519],"study_design_scores_gemma":[0.001565384,0.00077023776,0.00034046554,0.0000030828353,0.000007869298,0.000044921555,0.00008193117,0.00013474544,0.9337592,0.0013007865,0.061677873,0.0003134663],"about_ca_topic_score_codex":0.00009119832,"about_ca_topic_score_gemma":0.00005913579,"teacher_disagreement_score":0.42809156,"about_ca_system_score_codex":0.000057508136,"about_ca_system_score_gemma":0.00007815246,"threshold_uncertainty_score":0.9762707},"labels":[],"label_agreement":null},{"id":"W4285193868","doi":"10.1007/978-1-0716-2376-3_7","title":"Three-Dimensional Co-Culture Method for Studying Interactions Between Adipocytes, Extracellular Matrix, and Cancer Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Memorial University of Newfoundland","funders":"","keywords":"Extracellular matrix; Cell biology; Cancer cell; Cell culture; Cell; Context (archaeology); Fibroblast; In vivo; Tumor microenvironment; Cell type; Biology; Matrix (chemical analysis); Chemistry; Cancer; Biochemistry; Genetics","score_opus":0.04640504788382613,"score_gpt":0.4512420796018358,"score_spread":0.40483703171800967,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285193868","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01436583,0.01141296,0.972951,0.00016531798,0.00041326619,0.00047703867,0.000097973956,0.000075133736,0.00004147789],"genre_scores_gemma":[0.005475224,0.000043803277,0.9936165,0.00004104813,0.000075309494,0.00053293974,0.000046674006,0.000044907225,0.00012358176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99787176,0.0008314275,0.00032664576,0.00038738095,0.00015318303,0.00042961715],"domain_scores_gemma":[0.9982895,0.0013083275,0.000045875426,0.00021823004,0.0000381986,0.00009983844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027618175,0.00017701487,0.00033639674,0.00024079002,0.0001603616,0.000017122215,0.00027279436,0.00013026119,0.00021289228],"category_scores_gemma":[0.0002320507,0.00017550969,0.00007989499,0.00031334982,0.000087182234,0.000022164255,0.00028456442,0.000772985,0.000001833073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014803486,0.000021279984,0.0011968175,0.000055447963,0.00012821848,0.000013126192,0.0001031665,0.005305474,0.9045684,0.0007032245,0.0002943214,0.08759575],"study_design_scores_gemma":[0.0014793997,0.0003148634,0.00057071703,0.000043032665,0.000116350115,0.000035018464,0.00013669401,0.19144183,0.49468184,0.013480816,0.2970124,0.00068705453],"about_ca_topic_score_codex":0.00009995287,"about_ca_topic_score_gemma":0.000013855138,"teacher_disagreement_score":0.40988654,"about_ca_system_score_codex":0.00017018235,"about_ca_system_score_gemma":0.00003889814,"threshold_uncertainty_score":0.7157078},"labels":[],"label_agreement":null},{"id":"W4285196366","doi":"10.1007/978-1-0716-2376-3_11","title":"Flow Cytometry Analysis to Detect Lapatinib-Induced Modulation of Constitutive and IFN-γ-Induced HLA Class I Expression in HER2-Positive Breast Cancer Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Lapatinib; Flow cytometry; Downregulation and upregulation; Cancer research; Immune system; Cancer; Human leukocyte antigen; Biology; Cancer cell; Immunology; Breast cancer; Trastuzumab; Antigen; Genetics; Gene","score_opus":0.0402782762195107,"score_gpt":0.45619999057676763,"score_spread":0.41592171435725694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285196366","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8074843,0.00020011811,0.19073167,0.0003162507,0.00013525994,0.0007480181,0.00015251219,0.000012595059,0.00021923753],"genre_scores_gemma":[0.8085134,0.000021821354,0.19084728,0.0002569061,0.000019604167,0.00028699957,0.0000255902,0.000019152345,0.000009252938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9949576,0.0032257496,0.0004909043,0.0006442655,0.0002902825,0.0003911757],"domain_scores_gemma":[0.99879897,0.00038877653,0.00013940854,0.00038376727,0.00015004088,0.00013905489],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021588004,0.00019985746,0.0007535084,0.0014829178,0.000061149876,0.0000065992613,0.00017244206,0.00020329536,0.00019501954],"category_scores_gemma":[0.0004018932,0.00019511963,0.00011392508,0.0028418517,0.00012732271,0.000023957513,0.00034511398,0.00061121164,8.4944963e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004655285,0.00007857736,0.02441401,0.000028715533,0.00017476203,0.00007057267,0.00062136137,0.002744395,0.9058084,0.00002178642,0.0000042452134,0.06556768],"study_design_scores_gemma":[0.0011869835,0.0005717187,0.08431433,0.00007787834,0.00011710704,0.000018652061,0.00031643952,0.01110117,0.9018804,0.00018490499,0.000038224938,0.00019218316],"about_ca_topic_score_codex":0.0016687742,"about_ca_topic_score_gemma":0.0002412728,"teacher_disagreement_score":0.0653755,"about_ca_system_score_codex":0.00051052636,"about_ca_system_score_gemma":0.0002777834,"threshold_uncertainty_score":0.79567474},"labels":[],"label_agreement":null},{"id":"W4285200886","doi":"10.1007/978-1-0716-2376-3_21","title":"Reverse Transcription-Quantitative Real-Time Polymerase Chain Reaction (RT-qPCR) for Gene Expression Analyses","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Real-time polymerase chain reaction; Reverse transcription polymerase chain reaction; Reverse transcriptase; Gene expression; Biology; Gene; Molecular biology; Polymerase chain reaction; Computational biology; Genetics","score_opus":0.04819367751045631,"score_gpt":0.4450076246101756,"score_spread":0.3968139470997193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285200886","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1032713,0.00088814937,0.89385825,0.00038339055,0.0001318736,0.0008457207,0.00019943343,0.0000490254,0.00037284437],"genre_scores_gemma":[0.032839358,0.0003290791,0.9613465,0.000831403,0.00006709388,0.0020075124,0.0020559072,0.000060827395,0.00046233748],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965069,0.0016914991,0.00046151807,0.00084742246,0.00008837814,0.00040424312],"domain_scores_gemma":[0.9989114,0.000085434716,0.00021552281,0.00063018035,0.00007835342,0.000079108795],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013191414,0.0002741532,0.00035844668,0.00023371264,0.00025911635,0.000008892884,0.0003669388,0.00029222082,0.000066158194],"category_scores_gemma":[0.00020958853,0.0002844812,0.0002788822,0.00033018008,0.00015205593,0.000004178773,0.00019918535,0.0002280975,0.0000022511574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024576785,0.00013810278,0.00006910567,0.000008467156,0.000060303824,0.000006325851,0.000041299474,0.00013416322,0.99481887,0.0019565022,0.0004542928,0.0020668262],"study_design_scores_gemma":[0.0006795006,0.00068268913,0.00005334026,0.000005270675,0.000043672553,0.00002840545,0.00010157888,0.00036002253,0.9658333,0.002821006,0.029074712,0.00031651044],"about_ca_topic_score_codex":0.00011293839,"about_ca_topic_score_gemma":0.000006608416,"teacher_disagreement_score":0.07043194,"about_ca_system_score_codex":0.000058695012,"about_ca_system_score_gemma":0.000078267105,"threshold_uncertainty_score":0.9999607},"labels":[],"label_agreement":null},{"id":"W4285202989","doi":"10.1007/978-1-0716-2124-0_13","title":"Targeted Cross-Linking Mass Spectrometry on Single-Step Affinity Purified Molecular Complexes in the Yeast Saccharomyces cerevisiae","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Saccharomyces cerevisiae; Yeast; Mass spectrometry; Chemistry; Biochemistry; Chromatography","score_opus":0.032506847130211035,"score_gpt":0.3719437831567479,"score_spread":0.3394369360265369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285202989","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48026752,0.0011797729,0.48186532,0.0011183327,0.000121209596,0.0006255524,0.00016761468,0.00023422988,0.034420468],"genre_scores_gemma":[0.607133,0.000016083392,0.39175415,0.0005116603,0.000035392783,0.0003567008,0.00012855092,0.00003609198,0.00002838875],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963252,0.0014318771,0.0006003992,0.0007683025,0.00027110745,0.00060312473],"domain_scores_gemma":[0.9982402,0.00043970798,0.00024832095,0.0009863528,0.0000310601,0.000054404052],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019881157,0.00033157977,0.0004944336,0.00041669796,0.00021833615,0.00007280966,0.0012453694,0.00021506155,0.0023014043],"category_scores_gemma":[0.0002849767,0.00030079306,0.00020516671,0.0013392841,0.00017492421,0.00002468522,0.00034378382,0.0012176791,0.0000048337115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036012283,0.00027776996,0.0029371765,0.000032830016,0.000026706663,0.000082526705,0.00006261814,0.00014350984,0.93311024,0.06103216,0.00001908874,0.0022393744],"study_design_scores_gemma":[0.00054214976,0.00019618047,0.00052542135,0.000021161413,0.000018057413,0.00003890543,0.00024227612,0.00034906092,0.9053475,0.08284822,0.009463449,0.00040759984],"about_ca_topic_score_codex":0.00008016777,"about_ca_topic_score_gemma":0.000007207821,"teacher_disagreement_score":0.12686546,"about_ca_system_score_codex":0.00026581538,"about_ca_system_score_gemma":0.000038562383,"threshold_uncertainty_score":0.9999444},"labels":[],"label_agreement":null},{"id":"W4285210724","doi":"10.1007/978-1-0716-2124-0_19","title":"Proteomic Profiling of Interplay Between Agrobacterium tumefaciens and Nicotiana benthamiana for Improved Molecular Pharming Outcomes","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Transgenic Plants and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bioinformatics Solutions (Canada); University of Guelph","funders":"","keywords":"Nicotiana benthamiana; Agrobacterium tumefaciens; Agrobacterium; Biology; Profiling (computer programming); Computational biology; Botany; Microbiology; Genetics; Gene; Computer science; Transformation (genetics)","score_opus":0.018031516955386222,"score_gpt":0.3851246944510274,"score_spread":0.3670931774956412,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285210724","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49760517,0.00033520948,0.50073767,0.00015981254,0.00005950588,0.00078367157,0.0002829713,0.000006838485,0.00002914494],"genre_scores_gemma":[0.57716984,0.000024280784,0.42170072,0.00020494417,0.000016741427,0.0005333222,0.0002981878,0.00002660853,0.000025372734],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808747,0.0005306291,0.0004599902,0.0005397401,0.00005010232,0.00033208894],"domain_scores_gemma":[0.99931353,0.000080295285,0.00018113044,0.00032844843,0.000037173257,0.000059434577],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010870668,0.00020445867,0.00046648819,0.00012385739,0.00008057264,0.000008161235,0.00031134396,0.00012937498,0.000006314621],"category_scores_gemma":[0.00016454335,0.000197413,0.00017994305,0.00012728221,0.00019328773,0.0000027109083,0.00027966758,0.0001773112,1.221086e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013993109,0.00004318641,0.005942845,0.00003080244,0.00013701149,0.0000010499878,0.000044516368,0.000033947366,0.98686934,0.0015250393,0.000002617369,0.0052297097],"study_design_scores_gemma":[0.0027103159,0.0002701508,0.0009284161,0.000005432165,0.00007469251,0.000009405668,0.00005013948,0.00037858135,0.9917506,0.0019146897,0.0016595456,0.00024803675],"about_ca_topic_score_codex":0.000034238168,"about_ca_topic_score_gemma":0.0000037329758,"teacher_disagreement_score":0.079564646,"about_ca_system_score_codex":0.000020052012,"about_ca_system_score_gemma":0.00006157458,"threshold_uncertainty_score":0.8050268},"labels":[],"label_agreement":null},{"id":"W4285215068","doi":"10.1007/978-1-0716-2409-8_12","title":"Spinal Cord Injury in the Mouse Using the Infinite Horizon Spinal Cord Impactor","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spinal Cord Injury Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Spinal cord; Spinal cord injury; Medicine; Spinal cord compression; Paralysis; Cord; Anesthesia; Physical medicine and rehabilitation; Surgery","score_opus":0.13302128844418934,"score_gpt":0.5341610743248546,"score_spread":0.40113978588066523,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285215068","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9184922,0.00090658985,0.07748523,0.001550582,0.00028686557,0.0009587761,0.000019229095,0.000024395342,0.00027612076],"genre_scores_gemma":[0.8153075,0.000053451713,0.18112302,0.00296159,0.00015843177,0.00025142397,0.000026000165,0.000054052463,0.0000645262],"study_design_codex":"bench_or_experimental","study_design_gemma":"nonrandomized_trial","domain_scores_codex":[0.99159,0.0062218825,0.00053348177,0.00050768,0.00041508285,0.0007318725],"domain_scores_gemma":[0.9985278,0.0002665024,0.0001477415,0.00088908954,0.00007956585,0.0000892713],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006373983,0.00026589836,0.00049228966,0.00054729887,0.00020709807,0.000027988151,0.0008059853,0.00015374337,0.0002074851],"category_scores_gemma":[0.0014661526,0.00017268118,0.00017231112,0.0015403277,0.00038233414,0.00003246902,0.0006072793,0.0019488578,0.000005988363],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.026519777,0.00017924896,0.007935959,0.000030668973,0.00004650104,0.0003757144,0.000059420207,0.000013526245,0.8524207,0.0015389709,0.000078848934,0.11080067],"study_design_scores_gemma":[0.008353109,0.49253577,0.06858113,0.0002533882,0.0004443526,0.004449695,0.006520103,0.006238348,0.25781506,0.018814621,0.13381824,0.002176165],"about_ca_topic_score_codex":0.0006520878,"about_ca_topic_score_gemma":0.000016089258,"teacher_disagreement_score":0.5946056,"about_ca_system_score_codex":0.0003543042,"about_ca_system_score_gemma":0.0003074999,"threshold_uncertainty_score":0.84669256},"labels":[],"label_agreement":null},{"id":"W4285218787","doi":"10.1007/978-1-0716-2124-0_16","title":"Mining Proteomics Datasets to Uncover Functional Pseudogenes","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Machine Learning in Bioinformatics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Pseudogene; Computational biology; Computer science; Proteomics; Biology; Genetics; Gene; Genome","score_opus":0.02048432241387272,"score_gpt":0.3699581426326024,"score_spread":0.3494738202187297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285218787","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14448495,0.00018901656,0.8533792,0.0002934636,0.00043731657,0.00036359605,0.00015771683,0.000017304494,0.000677439],"genre_scores_gemma":[0.011274076,0.00000672993,0.9831546,0.003185317,0.000088941095,0.00027670347,0.0017617281,0.00003528328,0.00021664663],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9976157,0.0010659599,0.0003609596,0.0004609882,0.00012994386,0.00036646627],"domain_scores_gemma":[0.9991678,0.000053101703,0.000114256225,0.00055243116,0.000031757376,0.00008063956],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015865194,0.00019985472,0.00021362166,0.00017858684,0.00013904201,0.000014497792,0.00041864102,0.00013388676,0.0001605568],"category_scores_gemma":[0.0006966852,0.00021318726,0.000082128616,0.00029584064,0.00006133827,0.000002567816,0.0010488689,0.00026760227,0.000008820448],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012028112,0.000045780453,0.00569727,0.000010660808,0.000037203663,0.000008706319,0.000061738334,0.015630381,0.9708113,0.0006823274,0.0016910783,0.005203268],"study_design_scores_gemma":[0.00108296,0.0011273823,0.0011021057,0.0000070074634,0.000023314855,0.00019988648,0.0002186489,0.002985045,0.42617473,0.0010522334,0.56531876,0.00070793735],"about_ca_topic_score_codex":0.00002090217,"about_ca_topic_score_gemma":0.000009586117,"teacher_disagreement_score":0.56362766,"about_ca_system_score_codex":0.000050729614,"about_ca_system_score_gemma":0.00010042655,"threshold_uncertainty_score":0.8693524},"labels":[],"label_agreement":null},{"id":"W4285223491","doi":"10.1007/978-1-0716-2409-8_20","title":"Emerging Methods in Modeling Brain Development and Disease with Human Pluripotent Stem Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Induced pluripotent stem cell; Neuroscience; Human brain; Human Induced Pluripotent Stem Cells; Brain disease; Neural stem cell; Cognitive science; Biology; Computer science; Stem cell; Disease; Psychology; Embryonic stem cell; Medicine; Cell biology; Pathology","score_opus":0.0328671902699518,"score_gpt":0.3898698188844817,"score_spread":0.3570026286145299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285223491","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36219722,0.0019055286,0.6350835,0.000262087,0.00006358114,0.00037476356,0.000006309046,0.000010659712,0.00009633799],"genre_scores_gemma":[0.105097495,0.00005280917,0.8933742,0.0005524023,0.000023536826,0.0004105237,0.00008176953,0.00006621403,0.0003410578],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99361575,0.0040204055,0.0005155129,0.00098576,0.00019718912,0.0006653595],"domain_scores_gemma":[0.999051,0.000082715866,0.00010122129,0.00049911556,0.000043394524,0.00022258017],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0040546795,0.00030360158,0.00037734464,0.00038794102,0.00020344654,0.000020493233,0.00042663212,0.00013228465,0.000021200469],"category_scores_gemma":[0.00010320196,0.00029857157,0.00007013016,0.00037240607,0.00011924423,0.0000041512226,0.0010880308,0.0004499867,7.320649e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016362978,0.00010093058,0.0015477262,0.00004451417,0.00004888497,0.00013062528,0.00017949294,0.0202092,0.95395315,0.00024139661,0.000009548726,0.023370888],"study_design_scores_gemma":[0.0021689318,0.00053692335,0.00029102192,0.00003960453,0.000023167442,0.000042000553,0.0006426442,0.027552366,0.94542193,0.0015130866,0.020907046,0.0008612928],"about_ca_topic_score_codex":0.00005184058,"about_ca_topic_score_gemma":0.000034233242,"teacher_disagreement_score":0.25829068,"about_ca_system_score_codex":0.00012233004,"about_ca_system_score_gemma":0.0002362957,"threshold_uncertainty_score":0.99994665},"labels":[],"label_agreement":null},{"id":"W4285227490","doi":"10.1007/978-1-0716-2185-1_10","title":"Soapbark Triterpenes: Quillaja brasiliensis Cell Culture Sapogenin and Free Sterol Analysis by GCMS","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Natural product bioactivities and synthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Sapogenin; Saponin; Triterpene; Sterol; Chemistry; Terpene; Biochemistry; Diosgenin; Biology; Cholesterol; Organic chemistry","score_opus":0.007017942398642053,"score_gpt":0.31488452031302305,"score_spread":0.307866577914381,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285227490","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8354659,0.022866432,0.13940485,0.00062771665,0.00026924832,0.00041074576,0.00037193336,0.000024291261,0.0005588906],"genre_scores_gemma":[0.75622255,0.00059961353,0.23889507,0.001847232,0.000089134795,0.00013706877,0.0005258058,0.000055378478,0.001628149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99602866,0.0020757902,0.00036736336,0.0009517772,0.00013083211,0.00044557193],"domain_scores_gemma":[0.998849,0.00007526527,0.00015014147,0.0007911805,0.000040681058,0.00009374827],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010997687,0.00030818704,0.00051768834,0.00023146711,0.0001726697,0.000026817548,0.00051195465,0.00028553026,0.000105956315],"category_scores_gemma":[0.00023710744,0.00028631603,0.00027554194,0.0005949053,0.00018165661,0.0000042389365,0.0007740219,0.00032369047,7.7905815e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102982616,0.000080807076,0.0038801064,0.000011944153,0.00030504048,0.0000092457885,0.000095018324,0.00006371729,0.98612565,0.000040784016,0.0011550566,0.008129643],"study_design_scores_gemma":[0.0007562456,0.0005102623,0.00029991916,0.0000015855748,0.00022174738,0.000025009283,0.00041810967,0.000132301,0.9367998,0.0006080603,0.059777554,0.00044935392],"about_ca_topic_score_codex":0.000128139,"about_ca_topic_score_gemma":0.000031828138,"teacher_disagreement_score":0.09949022,"about_ca_system_score_codex":0.000036727513,"about_ca_system_score_gemma":0.000031951182,"threshold_uncertainty_score":0.9999589},"labels":[],"label_agreement":null},{"id":"W4285228088","doi":"10.1007/978-1-0716-2257-5_19","title":"High-Throughput Gene Mutagenesis Screening Using Base Editing","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; PROTEO; Université Laval","funders":"Canadian Institutes of Health Research","keywords":"CRISPR; Genome editing; Mutagenesis; Cas9; Computational biology; Base (topology); Biology; Genetics; Gene; Mutation; Computer science","score_opus":0.024386591641005748,"score_gpt":0.41566940563666793,"score_spread":0.39128281399566217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285228088","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26713926,0.0016413062,0.73043877,0.00005445433,0.0004985432,0.00013882777,0.000023877523,0.00001822257,0.000046751244],"genre_scores_gemma":[0.19063795,0.000025537318,0.8084207,0.00038767976,0.00024189228,0.000064315434,0.00013160484,0.000051380004,0.00003892163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974122,0.0009590702,0.00037075678,0.00065017183,0.000110225796,0.0004975471],"domain_scores_gemma":[0.9992607,0.00004375433,0.00009915422,0.0004863897,0.00003518675,0.00007479045],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013676538,0.00024151626,0.0002907721,0.00017406019,0.00017240497,0.000012617897,0.00033256956,0.00015606738,0.000086361324],"category_scores_gemma":[0.00024631256,0.00028467766,0.00013885899,0.00031520234,0.00007037486,0.0000022228674,0.0006860094,0.0002573028,6.790289e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022124294,0.00002712778,0.0012187965,0.000008006914,0.00004177004,0.000039995793,0.000028208848,0.1095962,0.8790201,0.00012749755,0.000019537692,0.009850654],"study_design_scores_gemma":[0.0005738815,0.00018902421,0.00012965185,0.000004782077,0.00002684892,0.000108477565,0.00015312522,0.009329591,0.9827099,0.00034078714,0.0060965866,0.00033733732],"about_ca_topic_score_codex":0.00012283136,"about_ca_topic_score_gemma":0.000006654099,"teacher_disagreement_score":0.10368983,"about_ca_system_score_codex":0.000043609103,"about_ca_system_score_gemma":0.00004806645,"threshold_uncertainty_score":0.99996054},"labels":[],"label_agreement":null},{"id":"W4285231030","doi":"10.1007/978-1-0716-2124-0_8","title":"HUNTER: Sensitive Automated Characterization of Proteolytic Systems by N Termini Enrichment from Microscale Specimen","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Machine Learning in Bioinformatics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; BC Cancer Agency; BC Children's Hospital; University of British Columbia","funders":"","keywords":"Microscale chemistry; Proteolysis; Computational biology; Rendering (computer graphics); Cell biology; Biology; Chemistry; Biological system; Biophysics; Computer science; Biochemistry; Enzyme; Mathematics; Artificial intelligence","score_opus":0.006253111814596853,"score_gpt":0.3235772253727734,"score_spread":0.3173241135581765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285231030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6030525,0.00015546693,0.39520437,0.000055895463,0.00029534477,0.0005498119,0.00036928346,0.000034162636,0.00028321162],"genre_scores_gemma":[0.6794389,0.000040418487,0.31286484,0.00058068626,0.00007982852,0.0003213143,0.0061467765,0.00006519026,0.0004620296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99696195,0.0017212814,0.00055215793,0.0003821154,0.00011271272,0.00026981084],"domain_scores_gemma":[0.9990745,0.00004392494,0.00037236858,0.00041689837,0.000049028356,0.000043246633],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008404072,0.00020086323,0.00034578767,0.00011079587,0.000061598446,0.00001240023,0.00028355728,0.00017124525,0.00003062424],"category_scores_gemma":[0.00014275263,0.00021028159,0.00007693989,0.00017755589,0.000098538934,0.00000294237,0.0004320364,0.00022211546,0.0000022834163],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006689438,0.000081554404,0.0023599714,0.000024475405,0.00006575053,0.0000042970023,0.00016203398,0.00026257485,0.99573517,0.000052613243,0.00009441268,0.0010902695],"study_design_scores_gemma":[0.0006408132,0.0005024982,0.001223322,0.000013807169,0.000020191605,0.000019602405,0.00013021327,0.013712827,0.96719253,0.00003224651,0.016257055,0.00025488343],"about_ca_topic_score_codex":0.000099402336,"about_ca_topic_score_gemma":0.0000010154396,"teacher_disagreement_score":0.0823395,"about_ca_system_score_codex":0.000060137867,"about_ca_system_score_gemma":0.000049896687,"threshold_uncertainty_score":0.8575034},"labels":[],"label_agreement":null},{"id":"W4285232607","doi":"10.1007/978-1-0716-2124-0_18","title":"Affinity Enrichment of Salmonella-Modified Membranes from Murine Macrophages for Proteomic Analyses","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina","funders":"","keywords":"Salmonella; Membrane; Microbiology; Chemistry; Biology; Biochemistry; Bacteria; Genetics","score_opus":0.056818380368348236,"score_gpt":0.46116525793608737,"score_spread":0.4043468775677391,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285232607","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82326704,0.0038555267,0.17141004,0.000081099264,0.00011287132,0.0007590608,0.00036801546,0.0000074619347,0.00013891068],"genre_scores_gemma":[0.7179679,0.00018854787,0.28010666,0.00010142187,0.000042747986,0.000892819,0.0005879343,0.00002433893,0.00008761256],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977373,0.0010175614,0.00031076613,0.00050998275,0.00010179131,0.0003226267],"domain_scores_gemma":[0.9992448,0.000092285765,0.00013049156,0.00042354118,0.00005027632,0.00005857663],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006289324,0.0001759469,0.00034441045,0.00013303122,0.000075849304,0.0000059674726,0.0003190228,0.000096862335,0.0000769804],"category_scores_gemma":[0.00022736736,0.00016666618,0.00018363625,0.0001797342,0.00010733028,0.0000013751968,0.0003789386,0.0001217308,5.244017e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00070050865,0.0002211397,0.001294094,0.000027794053,0.0002496051,0.000013426894,0.000025862706,0.0006270177,0.9923782,0.00008184909,0.000031340875,0.004349187],"study_design_scores_gemma":[0.001699556,0.0008965238,0.0007710937,0.0000029816024,0.00003554632,0.0000043843306,0.00004026232,0.000121043675,0.99111044,0.0031007384,0.0020653275,0.0001521281],"about_ca_topic_score_codex":0.0010115246,"about_ca_topic_score_gemma":0.000053752618,"teacher_disagreement_score":0.10869663,"about_ca_system_score_codex":0.000049004466,"about_ca_system_score_gemma":0.00009691719,"threshold_uncertainty_score":0.679645},"labels":[],"label_agreement":null},{"id":"W4285235953","doi":"10.1007/978-1-0716-2481-4_11","title":"Profiling Histone Methylation in Low Numbers of Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of British Columbia","funders":"","keywords":"Profiling (computer programming); Methylation; Computational biology; Histone; Biology; Genetics; Computer science; Gene; Operating system","score_opus":0.015329178921500321,"score_gpt":0.3775355788982422,"score_spread":0.36220639997674187,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285235953","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5584636,0.0020584108,0.43838373,0.00003054306,0.00022719413,0.00021965263,0.000010523788,0.0000039320867,0.0006024599],"genre_scores_gemma":[0.51840806,0.000093728675,0.48111236,0.000073106894,0.000020726797,0.00008007929,0.00012510766,0.000022199865,0.000064635315],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99714875,0.0016608111,0.00045129465,0.0004043712,0.00009268976,0.00024209578],"domain_scores_gemma":[0.99937344,0.00006125353,0.0001743198,0.00031925633,0.000040383708,0.000031350675],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020273041,0.00013491022,0.0002500522,0.00022346024,0.000035610672,0.0000027806427,0.00020822517,0.0001561165,0.000033823162],"category_scores_gemma":[0.00021486668,0.00015565386,0.000087387496,0.00034762672,0.000077530785,0.0000016660324,0.00021853136,0.00020086787,5.692381e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005390991,0.00008308807,0.006733734,0.000017292043,0.000012312582,0.000004315781,0.000060572445,0.0100851,0.97651416,0.0005628952,0.000002232967,0.0058703884],"study_design_scores_gemma":[0.0004862718,0.0002442857,0.00043979503,0.0000043698033,0.0000061990004,0.0000013458283,0.00007616116,0.0007593117,0.9931782,0.0029320633,0.001714634,0.00015737396],"about_ca_topic_score_codex":0.00008776702,"about_ca_topic_score_gemma":0.00002525499,"teacher_disagreement_score":0.04272864,"about_ca_system_score_codex":0.000059307007,"about_ca_system_score_gemma":0.00007225257,"threshold_uncertainty_score":0.634738},"labels":[],"label_agreement":null},{"id":"W4285237301","doi":"10.1007/978-1-0716-2409-8_9","title":"Analysis of mRNA Dynamics Using RNA Sequencing Data","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill Genome Centre; Occupational Cancer Research Centre","funders":"","keywords":"RNA; Transcription (linguistics); Biology; Transcriptome; Messenger RNA; Gene expression; microRNA; Computational biology; Gene; Genetics","score_opus":0.07051326721607656,"score_gpt":0.44860946909703336,"score_spread":0.37809620188095683,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285237301","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48400325,0.00054517837,0.51503694,0.00002448794,0.000053573633,0.00007816531,0.000102945094,0.0000031088778,0.00015234723],"genre_scores_gemma":[0.42877978,0.000054373977,0.5696146,0.0001936343,0.000023238503,0.000016752918,0.0011949523,0.000024922894,0.00009775729],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99691284,0.0016530366,0.00036899117,0.00057412946,0.0001321183,0.00035891618],"domain_scores_gemma":[0.9985674,0.000063715976,0.00014499333,0.0011165878,0.000049867154,0.000057425204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026542284,0.0001349256,0.00036615558,0.0004579439,0.00008680059,0.000007086934,0.0008757226,0.00011063591,0.00004771527],"category_scores_gemma":[0.0005142231,0.00014367663,0.00013572322,0.0010387108,0.000117227064,0.000002859657,0.0016143759,0.00024131028,1.6934015e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041502175,0.000027031898,0.009053047,0.0000072703024,0.0004204852,0.000018207982,0.000015854392,0.014541227,0.9684952,0.00038294998,0.0000050667923,0.0069921776],"study_design_scores_gemma":[0.0004649406,0.0003143096,0.00044403083,0.0000047642507,0.00028071698,0.000024155834,0.00040630635,0.6235779,0.37269968,0.0004998682,0.00096757145,0.0003157466],"about_ca_topic_score_codex":0.0005486317,"about_ca_topic_score_gemma":0.00014576128,"teacher_disagreement_score":0.6090367,"about_ca_system_score_codex":0.000114979084,"about_ca_system_score_gemma":0.00017745404,"threshold_uncertainty_score":0.5858963},"labels":[],"label_agreement":null},{"id":"W4285239526","doi":"10.1007/978-1-0716-2376-3_3","title":"Culture of Adherent Cancer Cell Lines","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Cancer cell lines; Cancer; Biology; Cancer cell; Genetics","score_opus":0.034545587843950475,"score_gpt":0.4442251673610153,"score_spread":0.40967957951706485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285239526","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22399728,0.1525839,0.59569776,0.0013429851,0.0026629148,0.0014605448,0.00023312145,0.00006167873,0.021959823],"genre_scores_gemma":[0.052651197,0.0016507346,0.9422679,0.001465372,0.00008136028,0.00028555337,0.000043688528,0.000026510765,0.0015276972],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988226,0.0005061045,0.00022199785,0.00021544933,0.000072786795,0.00016102403],"domain_scores_gemma":[0.9995984,0.000032801774,0.00008304453,0.00020808802,0.00003766167,0.000040025356],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00046630233,0.000092023976,0.00032671957,0.000061240375,0.000021125705,9.542225e-7,0.00009225587,0.000057895177,0.0012737027],"category_scores_gemma":[0.00004285558,0.000076146425,0.0001132198,0.0002137594,0.000047831883,0.0000047316203,0.00012303803,0.000196323,5.5891996e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008587053,0.00012213651,0.0017571772,0.000059105125,0.000033869597,0.00001920078,0.00027366023,0.000080598606,0.948871,0.000226176,0.00028763514,0.048183527],"study_design_scores_gemma":[0.00092794874,0.00041605646,0.00016318774,0.000010569248,0.00007463837,0.000012867125,0.00036851884,0.000037915437,0.82899165,0.0005028093,0.16840485,0.00008897479],"about_ca_topic_score_codex":0.0007618148,"about_ca_topic_score_gemma":0.00003893025,"teacher_disagreement_score":0.34657013,"about_ca_system_score_codex":0.00008553626,"about_ca_system_score_gemma":0.00008503187,"threshold_uncertainty_score":0.9996393},"labels":[],"label_agreement":null},{"id":"W4285240815","doi":"10.1007/978-1-0716-1979-7_24","title":"Reprogramming Mouse Oviduct Epithelial Cells Using In Vivo Electroporation and CRISPR/Cas9-Mediated Genetic Manipulation","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"CRISPR; Electroporation; Reprogramming; Biology; Genome editing; Somatic cell; Cell biology; Cas9; In vivo; Stem cell; Oviduct; Gene; Genetics","score_opus":0.01710548588564788,"score_gpt":0.39052290320667404,"score_spread":0.3734174173210262,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285240815","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5160754,0.00087933766,0.4827226,0.000018686454,0.000087075496,0.00018944225,0.0000074871637,0.000008461031,0.000011543718],"genre_scores_gemma":[0.59235543,0.00010287435,0.40717927,0.000106235835,0.00005198948,0.00006157276,0.00008407749,0.000034575663,0.00002398847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978563,0.00079834374,0.00035888405,0.00055571506,0.00007890368,0.00035183952],"domain_scores_gemma":[0.9995141,0.000029768747,0.00008877727,0.00029442384,0.000025146597,0.00004775352],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008535321,0.00018493728,0.00021523862,0.00022132286,0.0000716409,0.000014664139,0.00013654956,0.00015846893,0.000020322133],"category_scores_gemma":[0.00014238617,0.00021852477,0.000052489537,0.00028297314,0.00005343125,0.0000028834156,0.00020668587,0.00021612109,3.1371044e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004651726,0.000035718844,0.003274365,0.000011647619,0.000013845646,0.000018494584,0.00006623106,0.020669539,0.971798,0.00005114145,0.000005006991,0.0040094913],"study_design_scores_gemma":[0.00054771965,0.00027673892,0.0005715379,0.0000021635885,0.0000126693085,0.00004468068,0.00009221565,0.014822516,0.98037946,0.00035057316,0.0026508677,0.0002488811],"about_ca_topic_score_codex":0.00015263038,"about_ca_topic_score_gemma":0.00004851156,"teacher_disagreement_score":0.07628006,"about_ca_system_score_codex":0.000060141643,"about_ca_system_score_gemma":0.00004350398,"threshold_uncertainty_score":0.8911181},"labels":[],"label_agreement":null},{"id":"W4285240890","doi":"10.1007/978-1-0716-2349-7_11","title":"Discovery and Characterization of Oxidative Enzymes Involved in Monoterpenoid Indole Alkaloid Biosynthesis","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Alkaloids: synthesis and pharmacology","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"","keywords":"Indole alkaloid; Biochemistry; Natural product; Metabolic engineering; Biology; Enzyme; Biosynthesis; Oxidative phosphorylation; Computational biology; Chemistry; Indole test","score_opus":0.06837360604380209,"score_gpt":0.44740039398667375,"score_spread":0.37902678794287165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285240890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9578968,0.0014486286,0.03857502,0.0005387423,0.0005590177,0.0005473578,0.00014975775,0.000021452468,0.00026320145],"genre_scores_gemma":[0.9680742,0.0005150139,0.029106284,0.0017213796,0.000039927178,0.0003358488,0.00009561701,0.000035013218,0.00007672535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98956573,0.008647944,0.00068338134,0.00055624143,0.00008623956,0.0004604654],"domain_scores_gemma":[0.9980542,0.0013024514,0.000327411,0.00020805403,0.0000340303,0.000073841205],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0031977433,0.0002753297,0.0006821042,0.0005747571,0.0001203696,0.00000873996,0.00037314245,0.0003379933,0.0005758726],"category_scores_gemma":[0.00028313906,0.00028613608,0.000095405754,0.0005507543,0.0003802106,0.00010043622,0.00046522846,0.0008290616,0.0000023977111],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005184239,0.00035038454,0.03211211,0.000030268122,0.00009907033,0.00003601683,0.0007724647,0.00011028514,0.9388184,0.0041853525,0.0000098508435,0.022957396],"study_design_scores_gemma":[0.0013009862,0.00026322843,0.008850719,0.000008704001,0.000058627706,0.000011827983,0.00030776564,0.0010468597,0.9785766,0.003726939,0.0055517238,0.00029603642],"about_ca_topic_score_codex":0.000103483915,"about_ca_topic_score_gemma":0.000024701396,"teacher_disagreement_score":0.039758205,"about_ca_system_score_codex":0.00011531643,"about_ca_system_score_gemma":0.000088939596,"threshold_uncertainty_score":0.99995905},"labels":[],"label_agreement":null},{"id":"W4285245194","doi":"10.1007/978-1-0716-2349-7_5","title":"Studying Iridoid Transport in Catharanthus roseus by Grafting","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phytochemistry and Biological Activities","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; University of New Brunswick","funders":"","keywords":"Catharanthus roseus; Iridoid; Botany; Biology; Glycoside","score_opus":0.034685988687175685,"score_gpt":0.3290645440560497,"score_spread":0.294378555368874,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285245194","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9957089,0.00083421834,0.0018131385,0.00043081003,0.00009835191,0.00019028102,0.000079064754,0.000036479938,0.0008087599],"genre_scores_gemma":[0.99063057,0.000025287904,0.008533369,0.00042654315,0.00003071016,0.00016087637,0.00013378625,0.0000012141293,0.000057670695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99753755,0.0011728796,0.00031970124,0.00046558396,0.00008617999,0.00041812586],"domain_scores_gemma":[0.99945056,0.00035716896,0.00007730379,0.000062404775,0.0000095024525,0.00004305427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013961742,0.00016531242,0.0003135475,0.000021020243,0.00014497443,0.000007028353,0.00037753463,0.000117223935,0.00024785276],"category_scores_gemma":[0.000091338516,0.000076378245,0.00009447951,0.0004893958,0.00009566991,0.000024742858,0.00016023369,0.00043791468,8.020183e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040349623,0.00016104616,0.02574076,0.000002749817,0.000005432121,0.00003883103,0.00006297223,0.000018697776,0.92237335,0.00005634768,0.000006290854,0.051493175],"study_design_scores_gemma":[0.00063578744,0.0009103085,0.03228773,0.000013123238,0.000010957511,0.000044193486,0.0017324277,0.00013920305,0.9276388,0.008785123,0.027079992,0.0007223101],"about_ca_topic_score_codex":0.0003364649,"about_ca_topic_score_gemma":0.000065166765,"teacher_disagreement_score":0.050770864,"about_ca_system_score_codex":0.000055560577,"about_ca_system_score_gemma":0.000007352276,"threshold_uncertainty_score":0.31146145},"labels":[],"label_agreement":null},{"id":"W4285246845","doi":"10.1007/978-1-0716-2364-0_21","title":"Analysis of Airway Vagal Neurons","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Olfactory and Sensory Function Studies","field":"Neuroscience","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Bronchoconstriction; Vagus nerve; Sensory system; Airway; Neuroscience; Biology; Reflex; Acid-sensing ion channel; TRPV1; Medicine; Transient receptor potential channel; Ion channel; Anesthesia; Stimulation; Internal medicine; Receptor","score_opus":0.13680177638797378,"score_gpt":0.4022880728215707,"score_spread":0.2654862964335969,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285246845","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5902405,0.00011865697,0.4051406,0.00025781238,0.00066124374,0.0001225165,0.00004796892,0.00003327791,0.003377453],"genre_scores_gemma":[0.96607447,0.000012344039,0.03217674,0.0013615427,0.000008292213,0.000040899587,0.000004479872,0.000009947444,0.0003112973],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99533653,0.0038083426,0.00024254796,0.000350477,0.000086988,0.0001751354],"domain_scores_gemma":[0.9990423,0.0005776766,0.00009192296,0.00025310877,0.000013266236,0.000021759459],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066274084,0.000086874825,0.00031599423,0.00048456914,0.00011385443,0.0000021737426,0.00019404311,0.000033683024,0.00044423185],"category_scores_gemma":[0.00093491096,0.00008335811,0.0001594535,0.0015096498,0.00014890927,0.00001204834,0.00023340041,0.00020700345,0.0000018943388],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002703056,0.00005437785,0.0056360825,0.0000016063102,0.00005161693,0.000018361317,0.0001783543,0.0035671105,0.9838474,0.004199989,0.000008033393,0.0024100658],"study_design_scores_gemma":[0.00030707606,0.0003637218,0.004562715,5.392487e-7,0.00020539715,0.000009128275,0.00029023198,0.002594246,0.9663807,0.0017414094,0.02335198,0.0001928457],"about_ca_topic_score_codex":0.000009355242,"about_ca_topic_score_gemma":0.0000032879311,"teacher_disagreement_score":0.375834,"about_ca_system_score_codex":0.000020555126,"about_ca_system_score_gemma":0.000013834639,"threshold_uncertainty_score":0.48640272},"labels":[],"label_agreement":null},{"id":"W4285249820","doi":"10.1007/978-1-0716-2257-5_12","title":"Single-Step Affinity Purification (ssAP) and Mass Spectrometry of Macromolecular Complexes in the Yeast S. cerevisiae","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"Canadian Institutes of Health Research","keywords":"Macromolecule; Yeast; Lysis; Saccharomyces cerevisiae; Chemistry; Mass spectrometry; Computational biology; Tandem affinity purification; RNA; Biophysics; Affinity chromatography; Biochemistry; Biology; Chromatography","score_opus":0.03208935950899335,"score_gpt":0.3660025750177717,"score_spread":0.3339132155087784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285249820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7730261,0.005122419,0.21974245,0.00040676392,0.000087268054,0.00043075538,0.00005830553,0.0000049462774,0.0011209823],"genre_scores_gemma":[0.77490675,0.00015123365,0.22445092,0.00022571847,0.000029358223,0.00008596885,0.00010359769,0.000020301579,0.000026148742],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958348,0.0028544508,0.0003482303,0.00046385522,0.00016946816,0.00032919482],"domain_scores_gemma":[0.99923414,0.000079563324,0.00010612113,0.000496068,0.00004281202,0.000041309748],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002045499,0.00016280798,0.00025839344,0.00021845374,0.00006927778,0.000014323604,0.0005139754,0.00012298804,0.00004351726],"category_scores_gemma":[0.00028184848,0.00014328986,0.00008300476,0.0005151728,0.00023317325,0.0000017240747,0.00038261025,0.00032688447,7.8491814e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074257965,0.00014404522,0.0046360744,0.000025682331,0.0000219257,0.000016293981,0.00006729804,0.00007870213,0.98784244,0.0012010713,0.000022408212,0.005869813],"study_design_scores_gemma":[0.0006007103,0.0007970385,0.0033321152,0.0000062811387,0.000011289509,0.00005802423,0.0003267288,0.00026406097,0.98134285,0.004048119,0.0090078125,0.00020496827],"about_ca_topic_score_codex":0.000048217342,"about_ca_topic_score_gemma":0.000015380492,"teacher_disagreement_score":0.008985404,"about_ca_system_score_codex":0.00002767385,"about_ca_system_score_gemma":0.000047706493,"threshold_uncertainty_score":0.58431906},"labels":[],"label_agreement":null},{"id":"W4285250247","doi":"10.1007/978-1-0716-2124-0_24","title":"Untargeted Metabolomic Profiling of Fungal Species Populations","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Agriculture and Agri-Food Canada","funders":"","keywords":"Metabolomics; Orbitrap; Metabolite; Mass spectrometry; Phenotype; Chromatography; Secondary metabolite; Chemistry; High resolution; Biology; Mycelium; Computational biology; Gene; Biochemistry; Botany","score_opus":0.03547620206944433,"score_gpt":0.377201127019014,"score_spread":0.34172492494956963,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285250247","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5588175,0.0077819396,0.42933255,0.00016564486,0.00060055166,0.0003965,0.00013397724,0.000015528898,0.002755778],"genre_scores_gemma":[0.29656664,0.00011758748,0.7023282,0.00015273612,0.000053929838,0.000121919315,0.00020988546,0.000026580961,0.00042248899],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975583,0.0011323338,0.00044252494,0.00044874655,0.000095941614,0.0003221414],"domain_scores_gemma":[0.9992897,0.000037363217,0.000179202,0.00040243522,0.000054715958,0.000036584323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012420786,0.00018206795,0.00040722612,0.0002609414,0.00011665686,0.0000045582506,0.00031320343,0.00009964304,0.00022461808],"category_scores_gemma":[0.00038927884,0.00018599912,0.00016459396,0.00042816356,0.00013332505,0.0000017184967,0.00056653604,0.00021653135,0.0000011751683],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084066865,0.000072369614,0.01047813,0.000007674474,0.00008507295,0.000003715527,0.000020416634,0.00047572982,0.95917815,0.028566618,0.00004328426,0.0009847438],"study_design_scores_gemma":[0.00053691294,0.00042304088,0.0032940963,0.0000014047614,0.000039233975,0.00001701467,0.00019272645,0.00013306472,0.960956,0.00568112,0.028482731,0.00024269758],"about_ca_topic_score_codex":0.000031349166,"about_ca_topic_score_gemma":0.000011170869,"teacher_disagreement_score":0.27299568,"about_ca_system_score_codex":0.000028301634,"about_ca_system_score_gemma":0.00005961545,"threshold_uncertainty_score":0.7584824},"labels":[],"label_agreement":null},{"id":"W4285250385","doi":"10.1007/978-1-0716-2376-3_23","title":"Characterizing Extracellular Vesicles Using Nanoparticle-Tracking Analysis","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Extracellular vesicles; Nanoparticle tracking analysis; Nanotechnology; Troubleshooting; Tracking (education); Suspension (topology); Vesicle; Nanoparticle; Brownian motion; Computer science; Microvesicles; Materials science; Biological system; Chemistry; Physics; Biology; Mathematics; Cell biology; Biochemistry; Membrane","score_opus":0.029716454100688752,"score_gpt":0.3712804938801563,"score_spread":0.3415640397794676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285250385","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60786575,0.0040584924,0.38751373,0.000049270147,0.00017524944,0.0002273304,0.00001684153,0.000020384528,0.00007298148],"genre_scores_gemma":[0.70412284,0.000024131057,0.29506317,0.00034410923,0.00006504214,0.00010857852,0.00014629077,0.00005221849,0.000073624884],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9944679,0.0030882508,0.00068121817,0.00091715896,0.00018898158,0.00065645814],"domain_scores_gemma":[0.9985819,0.00007648353,0.0002834943,0.0008674979,0.00005586941,0.00013479513],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027499108,0.00031504568,0.00054634485,0.0004487402,0.000247634,0.000036549693,0.0006108042,0.00017783225,0.0001662527],"category_scores_gemma":[0.0004087322,0.00036142414,0.00045191578,0.001088348,0.00017394382,0.000007647563,0.00077301386,0.00035106417,0.0000027022206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016283388,0.00018079828,0.013796782,0.000010040951,0.00036379616,0.00010511959,0.00008006,0.005822861,0.97511756,0.0008573685,0.000003348403,0.0034994422],"study_design_scores_gemma":[0.0009807196,0.00016931254,0.00086179655,0.000004207885,0.00034244818,0.00004343026,0.00020223967,0.0068058963,0.98542035,0.0013700151,0.0033270165,0.0004725955],"about_ca_topic_score_codex":0.000036069312,"about_ca_topic_score_gemma":0.000006240176,"teacher_disagreement_score":0.09625713,"about_ca_system_score_codex":0.00009145862,"about_ca_system_score_gemma":0.000101462916,"threshold_uncertainty_score":0.9998838},"labels":[],"label_agreement":null},{"id":"W4285257221","doi":"10.1007/978-1-0716-2376-3_2","title":"Culturing Suspension Cancer Cell Lines","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Cell culture; Suspension culture; Multicellular organism; Cell biology; Cancer cell; Cell; Suspension (topology); Cancer cell lines; Biology; Cancer; Genetics","score_opus":0.03822113271534118,"score_gpt":0.43323721087721573,"score_spread":0.39501607816187456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285257221","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5692645,0.04893677,0.3622715,0.0023495508,0.0024983643,0.0009428658,0.000038933133,0.00009814086,0.0135993995],"genre_scores_gemma":[0.07221648,0.0012458557,0.92201775,0.0026272975,0.00013449143,0.00023418374,0.000039721133,0.000036085377,0.0014481497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863416,0.0005645482,0.00019765308,0.00029661972,0.000076234996,0.00023078802],"domain_scores_gemma":[0.999589,0.000051296603,0.000055758283,0.00022147116,0.000028915756,0.000053532698],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00066658,0.00010690849,0.00028544574,0.00007961191,0.000056764053,0.0000028780064,0.000087329536,0.000054917582,0.0011021482],"category_scores_gemma":[0.000054702898,0.000093159775,0.00009738574,0.00021747338,0.000036373498,0.000008954856,0.00019047156,0.00024567006,0.000001873003],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006888384,0.00006602954,0.0013437864,0.000026187958,0.000017091224,0.00007428911,0.0001118062,0.00016613034,0.9566242,0.00020595128,0.00013247236,0.041163146],"study_design_scores_gemma":[0.00092724035,0.00019436736,0.00025771523,0.0000099848985,0.00005533379,0.000039265313,0.00022655497,0.00011593545,0.82882595,0.00045760476,0.16876441,0.00012563038],"about_ca_topic_score_codex":0.0009830012,"about_ca_topic_score_gemma":0.00007387361,"teacher_disagreement_score":0.55974627,"about_ca_system_score_codex":0.00016066473,"about_ca_system_score_gemma":0.00006862798,"threshold_uncertainty_score":0.999811},"labels":[],"label_agreement":null},{"id":"W4285257629","doi":"10.1007/978-1-0716-2301-5_13","title":"Targeted Gene Editing in Porcine Germ Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institutes of Health","keywords":"CRISPR; Germline; Genome editing; Human disease; Cas9; Biology; Gene; Computational biology; Disease; Genotype; Genetic enhancement; Genetics; Bioinformatics; Medicine; Pathology","score_opus":0.009756448916183559,"score_gpt":0.38869942157065507,"score_spread":0.3789429726544715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285257629","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27999893,0.002976027,0.71565837,0.0001112436,0.00062826695,0.00020809803,0.000018992949,0.000014513919,0.00038554368],"genre_scores_gemma":[0.39671573,0.00007728183,0.6019706,0.0005454729,0.00016511479,0.0001488919,0.0001895052,0.00004661199,0.0001407767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979494,0.0007026732,0.0003481041,0.000500288,0.00007389877,0.0004256409],"domain_scores_gemma":[0.9994693,0.000031776457,0.00006722397,0.00035910003,0.00002014222,0.000052502943],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011961556,0.00018385262,0.0002497747,0.0002002399,0.000049222916,0.000005453336,0.0002840791,0.00014331711,0.0000827547],"category_scores_gemma":[0.00016051924,0.0002110748,0.00008585919,0.0003162826,0.00004557114,0.0000010758637,0.0004081305,0.0002963019,0.0000014287187],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024202329,0.000043786727,0.0022108632,0.0000073598285,0.000014884949,0.000047452813,0.00004743715,0.0118859485,0.98109055,0.00009030234,0.00006305452,0.0044741817],"study_design_scores_gemma":[0.00061319803,0.00020377287,0.00061405875,0.0000026976504,0.000005596236,0.000031686788,0.00008807109,0.0009733804,0.9806646,0.0004144671,0.016158596,0.00022985607],"about_ca_topic_score_codex":0.000049072733,"about_ca_topic_score_gemma":0.000017441598,"teacher_disagreement_score":0.11671682,"about_ca_system_score_codex":0.00004016531,"about_ca_system_score_gemma":0.000042590695,"threshold_uncertainty_score":0.86073804},"labels":[],"label_agreement":null},{"id":"W4285259602","doi":"10.1007/978-1-0716-2376-3_22","title":"Peptide-Affinity Isolation of Extracellular Vesicles and Cell-Free DNA From Human Plasma","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vitalité Health Network; Atlantic Cancer Research Institute; Dr. Georges-L.-Dumont University Hospital Centre; Université de Moncton; Beatrice Hunter Cancer Research Institute","funders":"","keywords":"Biomarker; Liquid biopsy; DNA; RNA; Cell-free fetal DNA; Computational biology; Chemistry; RNA extraction; Cell; Biological fluids; Molecular biology; Biology; Gene; Biochemistry; Chromatography; Cancer; Genetics","score_opus":0.016169252828784716,"score_gpt":0.3223976824171934,"score_spread":0.3062284295884087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285259602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8191805,0.0045510875,0.17525509,0.0000673978,0.00011940774,0.00023712088,0.00011094226,0.0000137330935,0.00046474894],"genre_scores_gemma":[0.66584635,0.0000480964,0.3334668,0.00010484738,0.00004167021,0.000058007554,0.00028995256,0.00003747858,0.00010678564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99628097,0.002017389,0.0005501486,0.0006913927,0.00013631293,0.0003237783],"domain_scores_gemma":[0.99856615,0.00011603123,0.00027283787,0.0009060411,0.00004362456,0.00009534215],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001272342,0.0002462453,0.0003367074,0.00014300775,0.00014341113,0.000011515643,0.0005880628,0.00022225112,0.0001092891],"category_scores_gemma":[0.00034346344,0.00028967098,0.0001352793,0.00018501954,0.0002714786,0.000004645958,0.0010375108,0.00027839854,0.0000010927318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011216777,0.0002047682,0.007722802,0.000021229152,0.000041880154,0.000024816021,0.00009254789,0.00021278976,0.9884505,0.001382386,0.000106149004,0.0016279628],"study_design_scores_gemma":[0.0012826038,0.00042688457,0.0018906291,0.000005491176,0.00004232331,0.000009290672,0.0001613718,0.00042824782,0.9784695,0.012824059,0.0041530444,0.0003065792],"about_ca_topic_score_codex":0.00010065427,"about_ca_topic_score_gemma":0.000022503531,"teacher_disagreement_score":0.15821172,"about_ca_system_score_codex":0.0000304461,"about_ca_system_score_gemma":0.00006119729,"threshold_uncertainty_score":0.99995553},"labels":[],"label_agreement":null},{"id":"W4285259964","doi":"10.1007/978-1-0716-2417-3_9","title":"Downregulation of Essential Genes in the Fungal Pathogen Candida auris","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Biology; Candida auris; Gene; Fungal pathogen; Pathogen; Genome; Antifungal drug; Function (biology); Human pathogen; Genetics; Microbiology; Identification (biology); Opportunistic pathogen; Computational biology; Antifungal; Virulence","score_opus":0.01971541429223571,"score_gpt":0.39816969892226994,"score_spread":0.3784542846300342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285259964","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8393775,0.0013408861,0.1581275,0.0003344382,0.00007984755,0.00029068452,0.000015772364,0.0000054904212,0.00042788032],"genre_scores_gemma":[0.91539663,0.000023158038,0.084160455,0.00026351743,0.000023119188,0.000049623042,0.000039745213,0.000006708897,0.000037030786],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.996933,0.0022423367,0.00029668075,0.00022918406,0.00012527392,0.00017352447],"domain_scores_gemma":[0.9994042,0.00017232013,0.00007181112,0.00030677285,0.000026798498,0.000018091321],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002474379,0.00008120126,0.00025867953,0.00012274514,0.00004129286,0.0000019919482,0.00013642262,0.000071675655,0.00013666305],"category_scores_gemma":[0.0002418517,0.000060481965,0.0000864537,0.00035533943,0.00010926453,0.000008751809,0.0000782208,0.00022208161,4.629335e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001889606,0.00009096257,0.15299824,0.000020025082,0.000011518875,0.000065198634,0.00032797092,0.0000575084,0.8306932,0.0014365538,0.000009357685,0.014100507],"study_design_scores_gemma":[0.0021451833,0.000863742,0.76340854,0.000021682716,0.00009279282,0.00009285024,0.0019736758,0.0010321034,0.21227863,0.012466428,0.005368056,0.000256338],"about_ca_topic_score_codex":0.00024638302,"about_ca_topic_score_gemma":0.00011014477,"teacher_disagreement_score":0.6184146,"about_ca_system_score_codex":0.00005378667,"about_ca_system_score_gemma":0.00008388506,"threshold_uncertainty_score":0.2466383},"labels":[],"label_agreement":null},{"id":"W4285263352","doi":"10.1007/978-1-0716-2376-3_15","title":"Evaluating Cell Membrane Localization and Intracellular Transport of Proteins by Biotinylation","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biotinylation; Intracellular; Cell biology; Intracellular transport; Cell; Chemistry; Membrane; Biophysics; Biochemistry; Biology","score_opus":0.017089075730265642,"score_gpt":0.35731128888037506,"score_spread":0.3402222131501094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285263352","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3094736,0.007248888,0.6823939,0.000089942594,0.0001033071,0.00036652252,0.000022269978,0.0000078487155,0.0002937296],"genre_scores_gemma":[0.6660202,0.00043624008,0.33282155,0.00015635298,0.000018737905,0.000068258625,0.00030599543,0.000026608921,0.00014603186],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99798876,0.001032053,0.00033566914,0.00037135024,0.000086759086,0.00018540327],"domain_scores_gemma":[0.99957794,0.000024729252,0.00014631922,0.0001810006,0.000041505442,0.000028494174],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001332778,0.00013658557,0.00021371173,0.00008258756,0.0000979687,0.0000022074544,0.00011590397,0.00019209449,0.000024113411],"category_scores_gemma":[0.00009505954,0.00013516056,0.000053766766,0.00020411404,0.00014320039,0.0000014319768,0.00012878787,0.00018352695,1.6619711e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005461483,0.00007860379,0.0022659907,0.000048597016,0.000032528224,0.0000018963582,0.00013707795,0.0014124992,0.99103814,0.000118240474,0.000011404119,0.0048004226],"study_design_scores_gemma":[0.0006372109,0.00061388663,0.00008603355,0.0000066062016,0.0000260538,0.0000069027606,0.00014886611,0.0019684301,0.993324,0.000279121,0.0027509267,0.00015196468],"about_ca_topic_score_codex":0.000039584258,"about_ca_topic_score_gemma":0.00000324846,"teacher_disagreement_score":0.3565466,"about_ca_system_score_codex":0.000014497234,"about_ca_system_score_gemma":0.00003285591,"threshold_uncertainty_score":0.55116874},"labels":[],"label_agreement":null},{"id":"W4285269469","doi":"10.1007/978-1-0716-2409-8_7","title":"Monitoring Autophagy in Neural Stem and Progenitor Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Autophagy; Neural stem cell; Cell biology; Biology; Neurogenesis; Progenitor cell; Stem cell; Programmed cell death; Apoptosis; Biochemistry","score_opus":0.029121607412445814,"score_gpt":0.40779371399228215,"score_spread":0.37867210657983635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285269469","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9798756,0.007823501,0.011223881,0.00011098952,0.00047574207,0.00035849537,0.00000369337,0.000029750292,0.000098348566],"genre_scores_gemma":[0.8033454,0.00007578718,0.19568905,0.00042433525,0.00007489227,0.00023866374,0.000004586193,0.000027631677,0.00011969637],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99808425,0.0010493798,0.00022997944,0.00030485075,0.00007343873,0.00025808203],"domain_scores_gemma":[0.9995756,0.00009641739,0.000045159002,0.00020588779,0.000011016861,0.00006592213],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064796617,0.000120717115,0.00028601525,0.00019294911,0.000041706546,0.0000043368555,0.000097340846,0.00007670666,0.00004806085],"category_scores_gemma":[0.000028708773,0.00011717748,0.000054249867,0.0002493387,0.000058593723,0.000012949836,0.0001401959,0.00032368605,0.0000010297227],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012521286,0.0001028827,0.03276587,0.000020131467,0.0000260054,0.00053976517,0.00020225756,0.000042377353,0.88024443,0.00018790949,0.0000017605975,0.085741416],"study_design_scores_gemma":[0.0017932695,0.00047058164,0.018237459,0.000014186624,0.000024157123,0.00009207577,0.0002721166,0.0013879851,0.975033,0.0012945994,0.0012171499,0.00016341651],"about_ca_topic_score_codex":0.000025192845,"about_ca_topic_score_gemma":3.9223113e-7,"teacher_disagreement_score":0.18446517,"about_ca_system_score_codex":0.00007273422,"about_ca_system_score_gemma":0.00004458647,"threshold_uncertainty_score":0.4778359},"labels":[],"label_agreement":null},{"id":"W4285271872","doi":"10.1007/978-1-0716-2409-8_10","title":"Assessment of Dopaminergic Neurodegeneration in Mice","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Pars compacta; Substantia nigra; Neurodegeneration; Neuroscience; Dopaminergic; Striatum; Stereology; Parkinson's disease; Midbrain; Neuron; Biology; Medicine; Dopamine; Disease; Pathology; Central nervous system","score_opus":0.04168505865912673,"score_gpt":0.40401431103179314,"score_spread":0.3623292523726664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285271872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60174215,0.000018765459,0.39621747,0.00028685952,0.00045121546,0.0002511683,0.000007780096,0.000023375394,0.0010012041],"genre_scores_gemma":[0.7769559,0.000016707316,0.22120504,0.0015586946,0.000011440676,0.00012865417,0.000009034652,0.000017507864,0.00009701285],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9934357,0.0052364487,0.00048669433,0.000480031,0.00015957915,0.00020159206],"domain_scores_gemma":[0.99927014,0.0002769132,0.00016422401,0.0002446182,0.000016014024,0.000028116694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011680457,0.000119945056,0.00021860578,0.00043920387,0.00006312031,0.000008228045,0.00027487497,0.000042237127,0.00013715039],"category_scores_gemma":[0.00046500625,0.00013164377,0.000051250365,0.0007481814,0.000045690325,0.000037145284,0.00019098255,0.00029998366,0.000001200075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000085233905,0.00007323706,0.00024715604,0.00000417527,4.5064118e-7,0.00003809194,0.000027442407,0.014610884,0.8874308,0.09653065,0.0000034212837,0.0010251596],"study_design_scores_gemma":[0.00043815494,0.00017510807,0.00037161395,0.0000011850242,0.000001814899,0.00002433411,0.00001225204,0.030585445,0.9641975,0.003557712,0.0005311595,0.00010368175],"about_ca_topic_score_codex":0.000010027344,"about_ca_topic_score_gemma":0.0000067070705,"teacher_disagreement_score":0.17521374,"about_ca_system_score_codex":0.000049306975,"about_ca_system_score_gemma":0.000060706152,"threshold_uncertainty_score":0.53682774},"labels":[],"label_agreement":null},{"id":"W4285282738","doi":"10.1007/978-1-0716-2376-3_16","title":"Multiplexed Quantitative Proteomic Profiling of Cancer Cells and Tissues Using Isobaric Labeling-Based Tags","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Prince Edward Island","funders":"","keywords":"Isobaric process; Profiling (computer programming); Isobaric labeling; Computational biology; Multiplexing; Quantitative proteomics; Chemistry; Chromatography; Proteomics; Biology; Computer science; Biochemistry; Physics; Gene","score_opus":0.04132624734757848,"score_gpt":0.4435373014400178,"score_spread":0.4022110540924393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285282738","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3745507,0.0011774597,0.6237974,0.000035701014,0.00001598702,0.00029375567,0.000073252995,0.000025391324,0.000030355368],"genre_scores_gemma":[0.033842452,0.000039191105,0.96528614,0.00006257512,0.000005860623,0.00071452005,0.000018187062,0.000023086981,0.000008000712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989131,0.0002451203,0.00028487397,0.00032662452,0.000048826663,0.00018145685],"domain_scores_gemma":[0.99939966,0.00012703061,0.00019960738,0.00020819833,0.000041879797,0.000023637029],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043355557,0.00012388897,0.00025222555,0.00009120792,0.000085459775,0.000003846984,0.00016385397,0.00008623346,0.00005796307],"category_scores_gemma":[0.00008395868,0.00013309876,0.000039764745,0.00021006662,0.00011668232,0.000011861706,0.00016306508,0.00026800114,1.00095995e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035502886,0.000039550647,0.0016888863,0.00006194879,0.000015134417,0.0000019647466,0.00008438934,0.006647344,0.9876426,0.0016573287,2.5460764e-7,0.0021251254],"study_design_scores_gemma":[0.00029228153,0.00004232333,0.000002549801,0.000017847757,0.000016298702,9.2961005e-7,0.00008123333,0.033440772,0.9597789,0.0059488094,0.0002429313,0.00013513048],"about_ca_topic_score_codex":0.00025594328,"about_ca_topic_score_gemma":0.0000049266764,"teacher_disagreement_score":0.34148875,"about_ca_system_score_codex":0.00007746493,"about_ca_system_score_gemma":0.00006070048,"threshold_uncertainty_score":0.54276097},"labels":[],"label_agreement":null},{"id":"W4285283700","doi":"10.1007/978-1-0716-2409-8_16","title":"Autopsy Human Brain Dissection Protocol for Common Age-Related Neurodegenerative Disorders","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurological diseases and metabolism","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Dissection (medical); Autopsy; Medicine; Neuroscience; Pathology; Anatomy; Psychology","score_opus":0.05657257775745304,"score_gpt":0.46548605603764465,"score_spread":0.4089134782801916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285283700","genre_codex":"methods","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"protocol","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22678322,0.00004069301,0.577671,0.003985141,0.0013741646,0.1863813,0.00013887131,0.0003956842,0.003229957],"genre_scores_gemma":[0.15800777,0.0000024819078,0.062393032,0.0117090205,0.00006658821,0.7669652,0.00006224629,0.00010073817,0.0006928775],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99265194,0.005795885,0.0003544728,0.0007207488,0.0000966501,0.00038028686],"domain_scores_gemma":[0.9989676,0.0005287447,0.00013504576,0.00028974787,0.0000101726,0.00006868314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073272316,0.00019235151,0.0002982645,0.00015069141,0.00036909402,0.00001859978,0.00036698213,0.00009026556,0.00014857994],"category_scores_gemma":[0.0010350182,0.00017351976,0.00017007519,0.0004543911,0.00020381635,0.000027498767,0.00027707685,0.00040774298,0.0000011586884],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011848785,0.00022991427,0.00012948022,0.000008967684,0.0000031572656,0.000045936064,0.00005048929,0.0007039418,0.9241919,0.06443569,0.000056449408,0.010025607],"study_design_scores_gemma":[0.003831416,0.0027380236,0.004046233,0.0000040376476,0.000022744773,0.000040762232,0.000033122018,0.0036844336,0.3982825,0.44470647,0.14202856,0.0005816901],"about_ca_topic_score_codex":0.00002396148,"about_ca_topic_score_gemma":0.000011229727,"teacher_disagreement_score":0.58058393,"about_ca_system_score_codex":0.000028651093,"about_ca_system_score_gemma":0.00002066146,"threshold_uncertainty_score":0.707593},"labels":[],"label_agreement":null},{"id":"W4285285895","doi":"10.1007/978-1-0716-2376-3_14","title":"Western Blot Analysis of Lapatinib-Mediated Inhibition of the Epidermal Growth Factor Receptor 2 (HER2) Pathway in Breast Cancer Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HER2/EGFR in Cancer Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Lapatinib; Western blot; Phosphorylation; Blot; Epidermal growth factor receptor; Molecular biology; Signal transduction; Receptor tyrosine kinase; Tyrosine-kinase inhibitor; Chemistry; Cancer research; Cancer; Tyrosine phosphorylation; Biology; Breast cancer; Receptor; Cell biology; Biochemistry; Trastuzumab","score_opus":0.040004353161672446,"score_gpt":0.41591909066818633,"score_spread":0.3759147375065139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285285895","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98961663,0.00048782598,0.007073071,0.0012196439,0.0002381671,0.0004955624,0.0007903593,0.000009843499,0.0000689155],"genre_scores_gemma":[0.97522247,0.000092278446,0.023678316,0.00056836643,0.000031087442,0.00025082717,0.00009676169,0.000030081397,0.000029786574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99385905,0.0044795997,0.0006514511,0.0003382002,0.0002993766,0.00037229748],"domain_scores_gemma":[0.9986706,0.00047786804,0.0002577329,0.00040086516,0.00012302451,0.00006991096],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.002139436,0.00015176595,0.00071051164,0.0006620056,0.000027230597,0.0000020010289,0.00022774638,0.0001479481,0.0013304576],"category_scores_gemma":[0.00038821506,0.00011995193,0.00021073829,0.0025351355,0.0002185745,0.00001592634,0.00029614344,0.0005623519,0.000001237453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010663487,0.00015643626,0.35178757,0.000055324024,0.00015157624,0.000006970599,0.00038644363,0.00012941516,0.64398503,0.000032544332,0.00001057214,0.003191488],"study_design_scores_gemma":[0.00093832484,0.00017677895,0.21203776,0.00004854135,0.000110949564,0.0000051016614,0.00014512178,0.00034930737,0.7855439,0.00006813424,0.00045350194,0.0001225741],"about_ca_topic_score_codex":0.0026977502,"about_ca_topic_score_gemma":0.00024686148,"teacher_disagreement_score":0.14155887,"about_ca_system_score_codex":0.00028412422,"about_ca_system_score_gemma":0.0002641441,"threshold_uncertainty_score":0.99958247},"labels":[],"label_agreement":null},{"id":"W4285289833","doi":"10.1007/978-1-0716-2261-2_19","title":"Characterization of the Monocyte Response to Biomaterial Therapy for Cardiac Repair","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tissue Engineering and Regenerative Medicine","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Biomaterial; Immune system; Monocyte; Inflammation; Medicine; Flow cytometry; Immunology; Extracellular matrix; Wound healing; Cell biology; Biology; Biomedical engineering","score_opus":0.02460388447577275,"score_gpt":0.38664394341377584,"score_spread":0.36204005893800306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285289833","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7151879,0.00054892193,0.28148046,0.0011794416,0.000970832,0.0005819208,0.000026919197,0.000020293817,0.0000033028502],"genre_scores_gemma":[0.35364255,0.000033520748,0.6432948,0.0006057396,0.00022972665,0.0008220804,0.00008871978,0.000048140017,0.0012347016],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814314,0.001315577,0.0001905003,0.00017123905,0.000056998677,0.00012257489],"domain_scores_gemma":[0.99954456,0.00009579564,0.000046686397,0.0002553051,0.00003054234,0.000027129761],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015899681,0.00007969771,0.00026424124,0.00012711562,0.000039967683,9.58779e-7,0.00007882155,0.000046113957,0.000014947836],"category_scores_gemma":[0.00035913097,0.000053288866,0.000105332605,0.00026839128,0.00004293967,0.000003204284,0.000060759037,0.00007234965,1.6586891e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001410709,0.000029005136,0.00059375504,0.000011018801,0.0000406979,0.0000025870613,0.00027827703,0.00006833196,0.9921114,0.0003462814,0.00001524399,0.005092736],"study_design_scores_gemma":[0.00079325266,0.00091435976,0.008882007,0.000009478376,0.000013490931,0.0000065168947,0.000026405429,0.00015075793,0.89690953,0.00003122467,0.09220964,0.000053314623],"about_ca_topic_score_codex":0.000008820152,"about_ca_topic_score_gemma":9.6848524e-8,"teacher_disagreement_score":0.36181435,"about_ca_system_score_codex":0.000047513513,"about_ca_system_score_gemma":0.000045841134,"threshold_uncertainty_score":0.21730569},"labels":[],"label_agreement":null},{"id":"W4285293142","doi":"10.1007/978-1-0716-2376-3_10","title":"Enzyme-Linked Immunosorbent Assay (ELISA)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":291,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island","funders":"","keywords":"Enzyme; Chemistry; Molecular biology; Biology; Biochemistry","score_opus":0.01804037923571036,"score_gpt":0.38396609395779085,"score_spread":0.3659257147220805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285293142","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07183785,0.0020973717,0.9235729,0.00036852187,0.0003037529,0.00027951362,0.00003363743,0.00006852573,0.0014379267],"genre_scores_gemma":[0.38121638,0.00013250353,0.6165239,0.0012449282,0.00006703204,0.00010920557,0.000266747,0.000036792902,0.00040251852],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958177,0.0025277447,0.00041031296,0.00068403216,0.00012634181,0.000433871],"domain_scores_gemma":[0.9989894,0.000059862356,0.00015281711,0.0006821093,0.00005718857,0.000058590955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021667294,0.00024738128,0.00033532837,0.00020165846,0.00015606318,0.000011953174,0.00045030753,0.00021340516,0.00002901849],"category_scores_gemma":[0.00038923076,0.00024404335,0.00022150489,0.00038986583,0.00016179756,0.0000017976769,0.00066214864,0.00037325762,0.0000016311849],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006406852,0.00009546017,0.000559485,0.0000032803766,0.000059063976,0.000021032096,0.000015418454,0.00012624142,0.97740734,0.00072231673,0.00016527872,0.020760993],"study_design_scores_gemma":[0.0003659536,0.0003723503,0.00011958373,0.0000031633117,0.000022246697,0.000050789706,0.00008447696,0.00020332795,0.8971633,0.003178287,0.098106876,0.0003296652],"about_ca_topic_score_codex":0.000033473527,"about_ca_topic_score_gemma":0.000010213733,"teacher_disagreement_score":0.3093785,"about_ca_system_score_codex":0.00006617268,"about_ca_system_score_gemma":0.00006225918,"threshold_uncertainty_score":0.9951799},"labels":[],"label_agreement":null},{"id":"W4285298872","doi":"10.1007/978-1-0716-2409-8_5","title":"Combination of Endothelin-1 (ET-1) and L-NAME to Induce Murine Focal Cortical Stroke with Persistent Sensorimotor Deficits","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nitric Oxide and Endothelin Effects","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; Heart and Stroke Foundation; University of Ottawa","funders":"","keywords":"Endothelin 1; Endothelin receptor; Stroke (engine); Medicine; Endothelins; Neuroscience; Anesthesia; Internal medicine; Psychology; Receptor; Physics","score_opus":0.022274329677566335,"score_gpt":0.35954395879379003,"score_spread":0.3372696291162237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285298872","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7634466,0.0002720012,0.23501574,0.0005199604,0.00008300727,0.00041387192,0.000017458919,0.000013243302,0.00021810555],"genre_scores_gemma":[0.6407827,0.000010321943,0.35823783,0.000766893,0.000012324884,0.00006144195,0.0000090660105,0.000016087466,0.00010330241],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978142,0.0012890861,0.00024444793,0.0002933869,0.00014008858,0.00021879049],"domain_scores_gemma":[0.9991358,0.00044724008,0.000061428014,0.00020157806,0.000060477396,0.000093513605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011445463,0.00012644294,0.00038085712,0.00023416003,0.000035338762,0.000002680292,0.000067051835,0.0000697856,0.000034678684],"category_scores_gemma":[0.00065930566,0.000106403946,0.00006678429,0.00019673971,0.00008170413,0.000008878718,0.00013338776,0.00034321492,0.0000010273526],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061659724,0.00024883501,0.017994966,0.0000404447,0.00008247884,0.000096909964,0.00025770345,0.00012340599,0.9648847,0.002021311,0.0000027329143,0.013629941],"study_design_scores_gemma":[0.015460339,0.025094159,0.03770213,0.000108081345,0.0005347042,0.0012836668,0.0019521215,0.004080292,0.9082438,0.0014401145,0.0033913432,0.00070924737],"about_ca_topic_score_codex":0.000050725615,"about_ca_topic_score_gemma":0.000002124003,"teacher_disagreement_score":0.123222105,"about_ca_system_score_codex":0.000053663658,"about_ca_system_score_gemma":0.000052831052,"threshold_uncertainty_score":0.43390268},"labels":[],"label_agreement":null},{"id":"W4285299352","doi":"10.1007/978-1-0716-2409-8_18","title":"Isolation of Mouse Embryonic Neural Stem Cells and Characterization of Neural Stem Markers by Flow Cytometry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; University of Ottawa","funders":"","keywords":"Neurogenesis; Neural stem cell; Neurosphere; Embryonic stem cell; Neuroscience; Genetically modified mouse; Biology; Flow cytometry; Stem cell; Neural development; Transgene; Adult stem cell; Cell biology; Immunology; Genetics; Gene","score_opus":0.026668600921709213,"score_gpt":0.30869318856031014,"score_spread":0.28202458763860094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285299352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7659162,0.000039483497,0.23330314,0.000031928106,0.00033425487,0.00022248903,0.00013157773,0.00001597931,0.0000049023383],"genre_scores_gemma":[0.9853805,0.000045816996,0.014000903,0.0004031985,0.000006693732,0.00003055923,0.0000114763725,0.000035278437,0.00008560445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9949111,0.0037528484,0.00042652432,0.0005019032,0.00016158307,0.00024607714],"domain_scores_gemma":[0.99893564,0.000431607,0.0003134773,0.0002486356,0.000022986236,0.00004765143],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006193483,0.00016934748,0.0003534768,0.00029333303,0.00007196673,0.000009102124,0.00024997574,0.00007451712,0.000021707156],"category_scores_gemma":[0.000077292076,0.00017663071,0.00007131168,0.00057297293,0.0001051398,0.00005098676,0.0002853732,0.00021357347,3.5730977e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001262208,0.000065662,0.0003951124,0.000031486175,0.0000040712707,0.000011919147,0.000035474186,0.00045203386,0.99416125,0.0001904674,0.0000016616528,0.0045246137],"study_design_scores_gemma":[0.000346061,0.00054076716,0.00017235124,0.0000024414803,0.000011705965,0.000024405539,0.000023237411,0.058423292,0.94026744,0.00001788713,0.00005124548,0.00011919155],"about_ca_topic_score_codex":0.0000034344403,"about_ca_topic_score_gemma":1.9315041e-7,"teacher_disagreement_score":0.21946423,"about_ca_system_score_codex":0.000022539154,"about_ca_system_score_gemma":0.000017900964,"threshold_uncertainty_score":0.72027916},"labels":[],"label_agreement":null},{"id":"W4285299492","doi":"10.1007/978-1-0716-2124-0_7","title":"N-Terminomics/TAILS of Tissue and Liquid Biopsies","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Brain Institute; Hotchkiss Brain Institute; Alberta Bone and Joint Health Institute; University of Calgary","funders":"","keywords":"Protease; Chromatography; Chemistry; Liquid chromatography–mass spectrometry; Mass spectrometry; Amine gas treating; Function (biology); Tandem mass spectrometry; Biochemistry; Biology; Cell biology; Enzyme; Organic chemistry","score_opus":0.019658259310097258,"score_gpt":0.4014734642842268,"score_spread":0.3818152049741296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285299492","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32360974,0.00050001,0.6743662,0.00011457442,0.000014805471,0.00009148551,0.000031281077,0.000024233774,0.0012477025],"genre_scores_gemma":[0.079083525,0.00005438446,0.92043364,0.00007337476,0.000007544995,0.00023197502,0.000016522752,0.000011987061,0.000087019536],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99932903,0.00011686744,0.00019794526,0.00021089312,0.000022502256,0.00012275367],"domain_scores_gemma":[0.9995537,0.00008166225,0.000088135705,0.00024574064,0.000011516274,0.000019287478],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030569764,0.00007654268,0.00017156293,0.000058612222,0.000041700823,0.000001962027,0.0001702593,0.000067025016,0.00013744416],"category_scores_gemma":[0.000052343596,0.000084057785,0.000025182902,0.00009250713,0.000112695714,0.000007522236,0.00030275717,0.0001643173,2.251178e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019070178,0.000019520818,0.00020684,0.000015240268,0.0000048575953,0.0000040438945,0.000039464638,0.000024323128,0.97453386,0.013676715,0.0000023419805,0.011453721],"study_design_scores_gemma":[0.00010290486,0.000069720256,0.000003872437,0.0000023700286,0.0000041443063,0.000022498218,0.000047570866,0.00007939344,0.9556844,0.029551603,0.014348717,0.00008277829],"about_ca_topic_score_codex":0.000022903461,"about_ca_topic_score_gemma":6.255227e-7,"teacher_disagreement_score":0.2460675,"about_ca_system_score_codex":0.000024865549,"about_ca_system_score_gemma":0.000013486795,"threshold_uncertainty_score":0.3427777},"labels":[],"label_agreement":null},{"id":"W4285302634","doi":"10.1007/978-1-0716-2124-0_22","title":"Novel Bioinformatics Strategies Driving Dynamic Metaproteomic Studies","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Metaproteomics; Computer science; Normalization (sociology); Workflow; Data mining; Database normalization; Visualization; Data visualization; Proteomics; Bioinformatics; Artificial intelligence; Pattern recognition (psychology); Biology; Database","score_opus":0.031023756325639477,"score_gpt":0.4247518401209829,"score_spread":0.3937280837953434,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285302634","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018289108,0.00073658663,0.97889936,0.00019676024,0.000048938015,0.0001979695,0.000027924492,0.00011673532,0.0014866351],"genre_scores_gemma":[0.014108616,0.00009820313,0.98448116,0.00015063674,0.000007976996,0.0009958559,0.000034418015,0.000024315732,0.00009885023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988366,0.0001263847,0.00040192629,0.00028509815,0.0000672603,0.00028276522],"domain_scores_gemma":[0.9991828,0.00015484642,0.00018030766,0.00042408987,0.0000312358,0.000026707028],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069458043,0.00017244653,0.00030657244,0.0001192681,0.00016762236,0.000013840222,0.00039307395,0.00008624363,0.00010154926],"category_scores_gemma":[0.00013987676,0.00017485343,0.00008513572,0.00025242614,0.00013627311,0.000044314897,0.00054215436,0.0004484197,0.0000013359669],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000044704075,0.000033877757,0.00004857582,0.000029208919,0.00004070481,0.0000025791255,0.00013447968,0.0012561488,0.96558905,0.02388278,0.0000038087828,0.008974302],"study_design_scores_gemma":[0.00041701648,0.00006340963,0.0000065093896,0.0000140107595,0.00003182273,0.00005556514,0.003481591,0.017607324,0.74059284,0.23015578,0.0071444637,0.0004296704],"about_ca_topic_score_codex":0.0000142173785,"about_ca_topic_score_gemma":0.000005742727,"teacher_disagreement_score":0.22499622,"about_ca_system_score_codex":0.0002155495,"about_ca_system_score_gemma":0.00006277257,"threshold_uncertainty_score":0.7130316},"labels":[],"label_agreement":null},{"id":"W4285305426","doi":"10.1007/978-1-0716-2124-0_14","title":"A Crosslinking Mass Spectrometry Protocol for the Structural Analysis of Microtubule-Associated Proteins","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Microtubule; Mass spectrometry; Cytoskeleton; Chemistry; Protocol (science); Workflow; Computational biology; Biological system; Tubulin; Computer science; Biophysics; Biology; Biochemistry; Chromatography; Cell biology; Database","score_opus":0.018728115073539532,"score_gpt":0.3916329169954075,"score_spread":0.3729048019218679,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285305426","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07208754,0.0001665726,0.89398044,0.00009826476,0.00009649286,0.033334218,0.000173992,0.000010003191,0.000052457246],"genre_scores_gemma":[0.05655608,0.000006491724,0.7605685,0.0004895987,0.000057818026,0.18166198,0.00044457315,0.00005965341,0.00015532834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99737203,0.0010965569,0.00050194515,0.0005146685,0.00010281824,0.00041200352],"domain_scores_gemma":[0.99884593,0.0001438117,0.00033086515,0.00055410655,0.000093464485,0.000031828407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018087415,0.00021400915,0.00043919517,0.00031111328,0.00020215592,0.0000152324,0.0006087448,0.00019223709,0.00006503013],"category_scores_gemma":[0.00042072064,0.00017638513,0.00043039967,0.0010058513,0.00016103695,0.0000016695386,0.00036085647,0.000262745,1.1200967e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021645126,0.00006002963,0.0053682635,0.000020431156,0.0009368402,0.000001889812,0.000048682563,0.0021257931,0.98930746,0.0007275327,0.000016994207,0.0011696463],"study_design_scores_gemma":[0.0022140818,0.0008825056,0.0018611669,0.00000666783,0.00036453802,0.00000771659,0.00011955829,0.007359792,0.9733567,0.0023274824,0.011145415,0.00035437828],"about_ca_topic_score_codex":0.000076677105,"about_ca_topic_score_gemma":0.00007742281,"teacher_disagreement_score":0.14832775,"about_ca_system_score_codex":0.00006796826,"about_ca_system_score_gemma":0.00010157544,"threshold_uncertainty_score":0.71927774},"labels":[],"label_agreement":null},{"id":"W4285309875","doi":"10.1007/978-1-0716-2257-5_22","title":"Bulk-Fitness Measurements Using Barcode Sequencing Analysis in Yeast","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"General Electric (Canada); University of Toronto","funders":"","keywords":"Barcode; Yeast; Identifier; DNA barcoding; Strain (injury); DNA sequencing; Biology; Computational biology; Genotype; Genetics; DNA; Computer science; Evolutionary biology; Gene; Anatomy","score_opus":0.09261327549033785,"score_gpt":0.4334351001607827,"score_spread":0.34082182467044486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285309875","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6623388,0.0010637213,0.33584267,0.00003956766,0.00012544342,0.00017906334,0.000024134002,0.000005369997,0.00038121772],"genre_scores_gemma":[0.72496814,0.000023139328,0.27445865,0.00020438604,0.00003523209,0.00008658489,0.00011181934,0.000028373439,0.0000837013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956778,0.0025184741,0.00037916712,0.0006657489,0.00021859181,0.0005401904],"domain_scores_gemma":[0.999276,0.000021810965,0.00008047366,0.00047859433,0.00006381404,0.00007934375],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00220384,0.00019491969,0.0003415387,0.00058681343,0.000097962446,0.0000136493645,0.0004743214,0.00015143666,0.00010787306],"category_scores_gemma":[0.00020285642,0.00021179748,0.00016699196,0.0013291212,0.00013777187,0.0000019503873,0.0007013346,0.00033807047,0.0000015204865],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006168277,0.000056849316,0.03490608,0.000008221144,0.00014074023,0.000029339195,0.00004170947,0.054945223,0.9083444,0.000090869165,0.0000025643212,0.0013723178],"study_design_scores_gemma":[0.0007885288,0.0002345858,0.0019196866,0.0000060473494,0.00006727745,0.000026501899,0.00029667708,0.014657085,0.9798355,0.0006008563,0.001185514,0.00038170186],"about_ca_topic_score_codex":0.00044442012,"about_ca_topic_score_gemma":0.00020389372,"teacher_disagreement_score":0.07149114,"about_ca_system_score_codex":0.00018539696,"about_ca_system_score_gemma":0.00019586599,"threshold_uncertainty_score":0.8636851},"labels":[],"label_agreement":null},{"id":"W4285309939","doi":"10.1007/978-1-0716-2124-0_10","title":"Phosphoproteomic Sample Preparation for Global Phosphorylation Profiling of a Fungal Pathogen","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bioinformatics Solutions (Canada); University of Guelph","funders":"","keywords":"Profiling (computer programming); Fungal pathogen; Nanotechnology; Phosphorylation; Sample preparation; Computational biology; Biology; Pathogen; Chemistry; Cell biology; Materials science; Microbiology; Computer science; Chromatography","score_opus":0.030749298113638815,"score_gpt":0.4178321991887412,"score_spread":0.3870829010751024,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285309939","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2341824,0.00086225435,0.7635299,0.000070662456,0.00018085232,0.00080927165,0.000096110154,0.000016037668,0.00025249503],"genre_scores_gemma":[0.18711846,0.000010934953,0.8120324,0.00009232103,0.000017900406,0.00060567027,0.00009816589,0.000007756921,0.000016383174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892795,0.00034970822,0.00028270818,0.00022893694,0.000058013495,0.00015267904],"domain_scores_gemma":[0.9994987,0.00015723257,0.00010086537,0.0001521907,0.000071315044,0.00001965639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010096936,0.000086507105,0.00026758527,0.00006594452,0.00008890218,0.0000020387804,0.000045402794,0.00006190849,0.000029124583],"category_scores_gemma":[0.00066403096,0.00008391713,0.00010489126,0.00027042974,0.000043975797,0.000010389162,0.00007431262,0.0001024731,2.186108e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005322155,0.000115863564,0.053416036,0.00004339583,0.000058249218,0.0000026976618,0.00010987425,0.0005986737,0.9253248,0.011062672,0.000011957978,0.008723554],"study_design_scores_gemma":[0.001915867,0.0027340523,0.0054713273,0.000013563292,0.00010455537,0.000049904116,0.0002812422,0.008438692,0.94259554,0.035030015,0.0031792168,0.00018600325],"about_ca_topic_score_codex":0.00011035128,"about_ca_topic_score_gemma":0.0000076448905,"teacher_disagreement_score":0.0485025,"about_ca_system_score_codex":0.00014555565,"about_ca_system_score_gemma":0.000071873736,"threshold_uncertainty_score":0.34220412},"labels":[],"label_agreement":null},{"id":"W4285310138","doi":"10.1007/978-1-0716-2349-7_13","title":"Generating an EMS Mutant Population and Rapid Mutant Screening by Thin-Layer Chromatography Enables the Studies of Monoterpenoid Indole Alkaloids Biosynthesis in Catharanthus Roseus","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Genetic and Mutation Studies","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University; University of New Brunswick","funders":"","keywords":"Mutant; Catharanthus roseus; Biosynthesis; Indole test; Population; Chemistry; Biology; Biochemistry; Botany; Gene; Medicine","score_opus":0.04374269965628549,"score_gpt":0.34072518822551406,"score_spread":0.2969824885692286,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285310138","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9858978,0.009236118,0.004188611,0.000262836,0.00006743447,0.000248336,0.00007355757,0.000014612642,0.00001073492],"genre_scores_gemma":[0.95570266,0.0005392904,0.043355342,0.00024109927,0.000017849574,0.00008157162,0.00005787888,0.0000020024502,0.0000023113685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99701285,0.0018798907,0.00040497447,0.00034852404,0.00011027517,0.00024349026],"domain_scores_gemma":[0.9991271,0.0005742059,0.00017512405,0.0000689484,0.000028246262,0.000026371732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001713496,0.00015673171,0.00036175828,0.00006468552,0.00029280726,0.000014857389,0.00019357009,0.000068058434,0.000014829531],"category_scores_gemma":[0.00018403812,0.00006762318,0.000054178738,0.00045594393,0.0001519337,0.000031612373,0.0002072322,0.00014041126,7.6866634e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025938332,0.000038938073,0.012667139,0.0000038057563,0.00003608325,0.0000053370263,0.00095190585,0.00033658094,0.9009776,0.000053143205,0.0000026180473,0.084900886],"study_design_scores_gemma":[0.0006042203,0.00097452,0.049972996,0.000035464942,0.000052788157,0.0000524449,0.018557176,0.0057502077,0.91961235,0.0030996592,0.00079553586,0.00049265637],"about_ca_topic_score_codex":0.0011129928,"about_ca_topic_score_gemma":0.00031294077,"teacher_disagreement_score":0.08440822,"about_ca_system_score_codex":0.0000162101,"about_ca_system_score_gemma":0.0000056300773,"threshold_uncertainty_score":0.2757593},"labels":[],"label_agreement":null},{"id":"W4285310679","doi":"10.1007/978-1-0716-2261-2_13","title":"Methods for Transepicardial Cell Transplantation in a Swine Myocardial Infarction Model","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Xenotransplantation and immune response","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; St. Michael's Hospital; Stem Cell Network; University Health Network","funders":"","keywords":"Medicine; Myocardial infarction; Transplantation; Cardiology; Internal medicine","score_opus":0.029940068705082156,"score_gpt":0.434470384892148,"score_spread":0.40453031618706586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285310679","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.049028363,0.00052073033,0.9479879,0.0006842252,0.00028502554,0.0009088793,0.000049223796,0.000031058215,0.0005045586],"genre_scores_gemma":[0.060560144,0.00019463678,0.93704265,0.0011209938,0.000026399624,0.0006744581,0.00027025165,0.00003253235,0.0000779036],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9951045,0.0036194252,0.00048398375,0.00038364995,0.000091231326,0.00031722043],"domain_scores_gemma":[0.99913394,0.0005081753,0.00006616225,0.00020317364,0.000033421464,0.000055143442],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034001358,0.0001704757,0.00047949454,0.00052535074,0.000064774606,0.000004597235,0.000105362225,0.00015925957,0.00004740749],"category_scores_gemma":[0.00013796243,0.00018093135,0.00024616183,0.00043385496,0.000052840387,0.000028445222,0.000016075286,0.00040780404,7.485494e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.004211293,0.00014229995,0.0004293175,0.00007878158,0.00003945042,0.00002487922,0.001153083,0.008648173,0.9416312,0.00064464775,0.000005242861,0.042991657],"study_design_scores_gemma":[0.025274238,0.0027194433,0.009566409,0.000042670115,0.00060463493,0.00043685586,0.00045481816,0.16893288,0.759455,0.014670956,0.017008642,0.0008334381],"about_ca_topic_score_codex":0.00004987945,"about_ca_topic_score_gemma":0.000004150723,"teacher_disagreement_score":0.18217617,"about_ca_system_score_codex":0.00012102535,"about_ca_system_score_gemma":0.00016075082,"threshold_uncertainty_score":0.73781663},"labels":[],"label_agreement":null},{"id":"W4285310709","doi":"10.1007/978-1-0716-2111-0_2","title":"Molecular Epidemiology of SARS-CoV-2 by Sequencing","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Molecular epidemiology; Coronavirus disease 2019 (COVID-19); Sars virus; Epidemiology; Biology; Computational biology; Virology; Medicine; Genetics; Internal medicine; Gene; Genotype","score_opus":0.13054820053688315,"score_gpt":0.5003872630059889,"score_spread":0.36983906246910575,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285310709","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5557717,0.0048040636,0.43678477,0.00049083884,0.00016105185,0.00039236317,0.00001733339,0.00003546138,0.0015424122],"genre_scores_gemma":[0.24771832,0.000016618971,0.61267674,0.13897803,0.000044187043,0.00040976625,0.000043806267,0.00009473584,0.00001782144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99152017,0.0060225804,0.00079665956,0.00071598816,0.00020533284,0.00073927065],"domain_scores_gemma":[0.997953,0.00097316864,0.00020764023,0.0007387747,0.000092735485,0.000034657583],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.006110482,0.00025336182,0.0010080272,0.00050383573,0.000066975525,0.000002013874,0.00045963234,0.00027148193,0.000025188103],"category_scores_gemma":[0.003398636,0.00024728558,0.00026954556,0.0008136167,0.00038363828,0.000016995777,0.00052573,0.000899938,0.0000062964637],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017725934,0.0001052869,0.033032347,0.000058473004,0.00010090788,0.00030383636,0.000095095216,0.000014756733,0.9552748,0.0042473613,0.00012124751,0.006468593],"study_design_scores_gemma":[0.0010420833,0.0007631338,0.00014492866,0.000014353005,0.000036988964,0.00016289682,0.00010490937,0.0009946808,0.9446243,0.012907998,0.039005708,0.00019799282],"about_ca_topic_score_codex":0.0006302057,"about_ca_topic_score_gemma":0.0000054737143,"teacher_disagreement_score":0.30805337,"about_ca_system_score_codex":0.0003443936,"about_ca_system_score_gemma":0.00035133207,"threshold_uncertainty_score":0.9999979},"labels":[],"label_agreement":null},{"id":"W4285310896","doi":"10.1007/978-1-0716-2124-0_20","title":"Label-Free Quantitative Proteomic Profiling of Fusarium Head Blight in Wheat","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Fusarium; Profiling (computer programming); Biology; Blight; Computational biology; Botany; Computer science; Programming language","score_opus":0.04613694098753639,"score_gpt":0.36942534131937554,"score_spread":0.32328840033183914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285310896","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99188185,0.0011182365,0.0037512623,0.0010157994,0.00019517924,0.0007002779,0.000071902025,0.000023134757,0.0012423566],"genre_scores_gemma":[0.33350307,0.000040182396,0.6651725,0.000429941,0.00005075461,0.0005334597,0.00020183493,0.0000032442385,0.000064995445],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965744,0.0021060817,0.00041941757,0.00041285844,0.00011891529,0.0003682964],"domain_scores_gemma":[0.9994407,0.00025509004,0.000102148806,0.00012806684,0.000038958606,0.00003502527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001769651,0.0001593872,0.0003767122,0.00006719453,0.000079991114,0.000006703297,0.0005729667,0.00013640706,0.00014465858],"category_scores_gemma":[0.0002613812,0.00006177045,0.00008242654,0.0007331295,0.00008470193,0.000026946705,0.00047540214,0.00038803637,0.0000021835046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000753291,0.00017932983,0.0049826307,0.00000874125,0.00001264466,0.000014735329,0.00015160273,0.000033784505,0.97654325,0.010956306,0.00001040883,0.007031264],"study_design_scores_gemma":[0.00041967,0.0010710312,0.002310808,0.000008677,0.0000070222713,0.000008411778,0.0003617807,0.00010278114,0.9754818,0.018231787,0.0017977522,0.00019849],"about_ca_topic_score_codex":0.00023016543,"about_ca_topic_score_gemma":0.00024616806,"teacher_disagreement_score":0.66142124,"about_ca_system_score_codex":0.00005316536,"about_ca_system_score_gemma":0.000012602377,"threshold_uncertainty_score":0.25189257},"labels":[],"label_agreement":null},{"id":"W4285412042","doi":"10.1007/978-1-0716-2473-9_11","title":"Monitoring Hippo Signaling Pathway Activity Using a Luciferase-Based Large Tumor Suppressor (LATS) Biosensor","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hippo pathway signaling and YAP/TAZ","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Suppressor; Biosensor; Luciferase; Hippo signaling pathway; Cell biology; Cancer research; Chemistry; Biology; Signal transduction; Biochemistry; Gene","score_opus":0.035692410972045625,"score_gpt":0.36867910780658003,"score_spread":0.3329866968345344,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285412042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65795803,0.00080270536,0.3402904,0.000039844923,0.00042779784,0.00026523517,0.00010731339,0.000037988884,0.00007069789],"genre_scores_gemma":[0.7566038,0.0000039377314,0.24258612,0.00031204792,0.00017291462,0.00013401362,0.00007196181,0.00007530336,0.000039922958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99340844,0.0038953375,0.0004888525,0.0010666212,0.0002206457,0.0009200861],"domain_scores_gemma":[0.99859047,0.00016962543,0.00024687234,0.00075200456,0.000085170315,0.00015585365],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0028309403,0.000431207,0.0005307029,0.00030479216,0.00038639552,0.000031777738,0.0005174503,0.00027683968,0.00007645142],"category_scores_gemma":[0.0005095921,0.00047306775,0.0003074404,0.00045222408,0.00012118563,0.0000052899504,0.0004956887,0.000565547,0.0000025481738],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002463194,0.00025002114,0.00313354,0.000028033077,0.00006337057,0.00015287916,0.00006409773,0.005974393,0.9877989,0.00007363079,0.0000021856526,0.00221261],"study_design_scores_gemma":[0.0012678459,0.00043153274,0.00006378345,0.000024465407,0.000030313548,0.000049300394,0.00012335365,0.0043980717,0.9878666,0.00023955098,0.0049647996,0.000540383],"about_ca_topic_score_codex":0.00006861137,"about_ca_topic_score_gemma":0.0000047497992,"teacher_disagreement_score":0.098645754,"about_ca_system_score_codex":0.00012566074,"about_ca_system_score_gemma":0.00030047746,"threshold_uncertainty_score":0.99977213},"labels":[],"label_agreement":null},{"id":"W4285512395","doi":"10.1007/978-1-0716-2497-5_1","title":"Quantitative Chromosome Conformation Capture (3C-qPCR)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Chromosome conformation capture; Chromatin; Chromosome; Population; Computational biology; Biology; Genetics; DNA; Gene; Medicine; Gene expression","score_opus":0.014665342515397186,"score_gpt":0.34869824940768246,"score_spread":0.33403290689228526,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4285512395","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39757243,0.0016233264,0.5976363,0.0002192688,0.0004022081,0.00028803214,0.000077777455,0.000014886726,0.0021658095],"genre_scores_gemma":[0.32566896,0.000108993416,0.67161447,0.0012294366,0.00004057409,0.00019111345,0.0008505122,0.000042141437,0.00025381616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99795043,0.00093453465,0.00033350947,0.00038600608,0.0000813893,0.00031414823],"domain_scores_gemma":[0.9993358,0.000035636156,0.00015169318,0.00038157022,0.00004646622,0.000048787362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094476365,0.00018301587,0.0002315655,0.000120356875,0.00012013671,0.000009047718,0.0003463584,0.00016611944,0.00008779265],"category_scores_gemma":[0.00016003719,0.00019644362,0.00010595494,0.00019921274,0.00010789706,0.0000024308445,0.00040662524,0.000260314,0.000004742075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048893926,0.000046044097,0.00038681418,0.0000097077145,0.000038046,0.00000921784,0.00016259571,0.0021966742,0.9855441,0.009513432,0.000114368086,0.0019301387],"study_design_scores_gemma":[0.0038624422,0.0037626727,0.0012709872,0.000016476288,0.00007414292,0.00037755884,0.0038369803,0.02886929,0.73073804,0.03374433,0.19156688,0.0018802086],"about_ca_topic_score_codex":0.000036522564,"about_ca_topic_score_gemma":0.000016560238,"teacher_disagreement_score":0.25480604,"about_ca_system_score_codex":0.000059076752,"about_ca_system_score_gemma":0.00008624061,"threshold_uncertainty_score":0.80107385},"labels":[],"label_agreement":null},{"id":"W4286539457","doi":"10.1007/978-1-0716-3519-3_12","title":"Developing Complex RNA Design Applications in the Infrared Framework","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Agence Nationale de la Recherche","keywords":"Infrared; Computer science; Computational biology; Systems engineering; Nanotechnology; Materials science; Engineering; Biology; Physics; Optics","score_opus":0.07951617247685067,"score_gpt":0.41082160558699105,"score_spread":0.3313054331101404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286539457","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0071726874,0.0017443709,0.98928016,0.00024791597,0.000094934585,0.0005981253,0.0000028125264,0.000009293088,0.00084969355],"genre_scores_gemma":[0.08824097,0.00008495389,0.9095975,0.0014131133,0.00009770914,0.00048789897,0.00003806441,0.000020337808,0.00001945857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962914,0.0026014694,0.00029767305,0.00030347076,0.00006470062,0.00044126456],"domain_scores_gemma":[0.9990155,0.00030968265,0.0000848993,0.0005194292,0.000025965013,0.000044514643],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026607905,0.0001815694,0.00021079922,0.00009689159,0.000067574685,0.000013872773,0.0004989793,0.00035715973,0.000022421647],"category_scores_gemma":[0.0005826525,0.0001404272,0.000070103415,0.00030989802,0.000090857786,0.0000030961428,0.00012490511,0.00018742167,0.000006760467],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016169612,0.000042952743,0.0013210512,0.0000064416813,0.000015368982,0.0000012276054,0.00015317723,0.000021542815,0.9433233,0.041565523,0.00002344621,0.013509791],"study_design_scores_gemma":[0.00017738203,0.000075959324,0.0016411664,0.000012782876,0.000009137866,0.000011795847,0.00019419547,0.000019850388,0.87245077,0.08529443,0.03985345,0.00025906862],"about_ca_topic_score_codex":0.0000101628175,"about_ca_topic_score_gemma":0.0000023473337,"teacher_disagreement_score":0.081068285,"about_ca_system_score_codex":0.000022566588,"about_ca_system_score_gemma":0.000048683898,"threshold_uncertainty_score":0.57264555},"labels":[],"label_agreement":null},{"id":"W4286579129","doi":"10.1007/978-1-0716-2513-2_12","title":"Identification of Drug Resistance Mechanisms Using Genome-Wide CRISPR-Cas9 Screens","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"CRISPR; Gene knockout; Cas9; Genome editing; Biology; Computational biology; Gene; Guide RNA; Genome; Genetics; Drug discovery; Genetic screen; Bioinformatics; Phenotype","score_opus":0.015090187576528776,"score_gpt":0.39418847624096975,"score_spread":0.37909828866444095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286579129","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13381833,0.0024001386,0.8631673,0.000069011454,0.00020675707,0.00019426605,0.000025986483,0.000008875978,0.000109377506],"genre_scores_gemma":[0.42936492,0.00004778981,0.57000935,0.00015414594,0.000023574068,0.00005123259,0.000069748676,0.000032048425,0.00024716803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99790305,0.0007859351,0.0004650411,0.00046125732,0.00010214234,0.0002825842],"domain_scores_gemma":[0.9991805,0.000040887677,0.00016131069,0.00051926536,0.000055849872,0.00004217755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015379379,0.00016029816,0.00024103043,0.0001635367,0.00008090914,0.000006129113,0.0003421029,0.000099498684,0.000030430008],"category_scores_gemma":[0.0002483487,0.00019012237,0.00011232065,0.00027466338,0.000070905924,0.0000016466217,0.0003286736,0.0001645484,5.409272e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038842416,0.000033269698,0.0003274561,0.000021113885,0.00003129593,0.0000059522886,0.00006262082,0.007682625,0.9902146,0.001156592,0.000018957642,0.0004066708],"study_design_scores_gemma":[0.000290125,0.00006171378,0.00036833753,0.0000038536778,0.00002083233,0.000010432017,0.00016495994,0.0008415199,0.9892329,0.0038514135,0.0049481844,0.0002057312],"about_ca_topic_score_codex":0.000021522987,"about_ca_topic_score_gemma":0.00001711805,"teacher_disagreement_score":0.2955466,"about_ca_system_score_codex":0.000039295697,"about_ca_system_score_gemma":0.000049938397,"threshold_uncertainty_score":0.77529657},"labels":[],"label_agreement":null},{"id":"W4286580804","doi":"10.1007/978-1-0716-2513-2_16","title":"Analysis of ER-Phagy in Cancer Drug Resistance","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Endoplasmic Reticulum Stress and Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Autophagy; Endoplasmic reticulum; Gene silencing; Cell biology; Cancer cell; Unfolded protein response; Mechanism (biology); Biology; Cancer; Chemistry; Cancer research; Gene; Genetics; Apoptosis","score_opus":0.012380130015855065,"score_gpt":0.3865640815517004,"score_spread":0.3741839515358453,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286580804","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.921338,0.009941256,0.06678891,0.00020750916,0.00016818123,0.00018946265,0.00013330489,0.0000055907417,0.0012277637],"genre_scores_gemma":[0.9146457,0.00037566005,0.0834116,0.00046120083,0.000017906235,0.000319661,0.0002142228,0.000021966716,0.00053211895],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973983,0.0013567023,0.00038603038,0.0004879359,0.00009234577,0.00027866443],"domain_scores_gemma":[0.99928075,0.00005647733,0.00013956506,0.0004397296,0.000033417356,0.00005006419],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079397555,0.00014388152,0.00038691828,0.0003725305,0.000034224566,0.0000032513772,0.00031612252,0.000082217695,0.00015314999],"category_scores_gemma":[0.00019006374,0.00015080294,0.00019380002,0.0009378601,0.0001129396,0.0000011922801,0.0002858255,0.00015689491,2.0608869e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019798678,0.00016268237,0.10628992,0.000020979523,0.00027149677,0.000036255056,0.00008672135,0.008701149,0.88043904,0.0013373548,0.00010622164,0.0023501816],"study_design_scores_gemma":[0.0025801174,0.00023471427,0.031178193,0.000023017254,0.0005425811,0.0000043328896,0.0004785681,0.0021873503,0.9199214,0.0035819965,0.038448144,0.0008195587],"about_ca_topic_score_codex":0.00031594664,"about_ca_topic_score_gemma":0.00078292546,"teacher_disagreement_score":0.075111724,"about_ca_system_score_codex":0.00004273077,"about_ca_system_score_gemma":0.00008912358,"threshold_uncertainty_score":0.6149565},"labels":[],"label_agreement":null},{"id":"W4286832097","doi":"10.1007/978-1-0716-2201-8_9","title":"Analyzing the Interaction of RBPJ with Mitotic Chromatin and Its Impact on Transcription Reactivation upon Mitotic Exit","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of General Medical Sciences; National Cancer Institute","keywords":"Bookmarking; Mitosis; Chromatin; Cell biology; Transcription factor; Biology; Chromatin immunoprecipitation; Transcription (linguistics); Cell division; Cell; Genetics; Gene; Gene expression; Promoter","score_opus":0.013956590906955644,"score_gpt":0.3367392285257283,"score_spread":0.3227826376187726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286832097","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.87767524,0.00046767356,0.121303216,0.00011966853,0.000094978495,0.00023299434,0.000011890133,0.0000043478885,0.000090005655],"genre_scores_gemma":[0.9628389,0.00009815788,0.03679895,0.000063283784,0.000022678816,0.000049034425,0.000097154065,0.000020381252,0.000011498751],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982578,0.0009308988,0.00026097716,0.0003097167,0.00006548234,0.00017509203],"domain_scores_gemma":[0.999426,0.00006876062,0.00018804864,0.00025440517,0.000036409077,0.000026345777],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007398027,0.00015684898,0.00019917256,0.00017734579,0.000085588814,0.000009485684,0.00015273747,0.00007832185,0.000014921467],"category_scores_gemma":[0.000090120935,0.00011505564,0.000077591256,0.00025850345,0.00004579685,0.0000035269425,0.00007512231,0.000207663,2.4107493e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020933103,0.000059458802,0.00083899836,0.00001666167,0.000069028865,0.0000022983802,0.00008816398,0.00911644,0.9850561,0.00026780527,0.0000038404337,0.004271871],"study_design_scores_gemma":[0.0010296555,0.002785773,0.0075921337,0.000032165226,0.00007193192,0.000116537776,0.00047527553,0.02328243,0.9622363,0.0016527106,0.0004141617,0.00031092245],"about_ca_topic_score_codex":0.000042080417,"about_ca_topic_score_gemma":0.000012280439,"teacher_disagreement_score":0.08516364,"about_ca_system_score_codex":0.000048701346,"about_ca_system_score_gemma":0.000034328903,"threshold_uncertainty_score":0.4691833},"labels":[],"label_agreement":null},{"id":"W4286839303","doi":"10.1007/978-1-0716-2293-3_13","title":"Variant Calling from RNA-seq Data Using the GATK Joint Genotyping Workflow","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Genotyping; Workflow; Pipeline (software); Computer science; Computational biology; Biology; Genetics; Gene; Database; Genotype; Programming language","score_opus":0.1966970593698916,"score_gpt":0.47562477071275805,"score_spread":0.2789277113428664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286839303","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12681183,0.0054278374,0.86590827,0.0008256312,0.00039694316,0.00029394703,0.000029249692,0.000021176487,0.00028513017],"genre_scores_gemma":[0.060633417,0.00024485416,0.93702984,0.0014409564,0.0004534524,0.000021751051,0.00013828001,0.000028606315,0.000008835558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99653006,0.0019027543,0.00035120058,0.00040617381,0.00013125203,0.0006785515],"domain_scores_gemma":[0.9977355,0.00075074163,0.0000814691,0.0011835251,0.000046059733,0.00020270214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003805054,0.00016922751,0.00039950403,0.00012527446,0.000079112615,0.000022852422,0.00039380186,0.00020383313,0.00024658185],"category_scores_gemma":[0.0030102162,0.000114619106,0.00007705351,0.00027378293,0.00012843173,0.000060052895,0.00060711295,0.00049975264,0.00001425251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066419656,0.00007707735,0.016365793,0.000017695404,0.000109274944,0.000100545105,0.00015892746,0.000018043644,0.94681925,0.00056797377,0.000046072466,0.035652958],"study_design_scores_gemma":[0.004138026,0.0004076816,0.05325032,0.0007634795,0.0007982242,0.00046600614,0.00049681746,0.06643243,0.81544954,0.018882504,0.03765672,0.0012582673],"about_ca_topic_score_codex":0.0014080097,"about_ca_topic_score_gemma":0.000017628081,"teacher_disagreement_score":0.1313697,"about_ca_system_score_codex":0.00008082693,"about_ca_system_score_gemma":0.0001129752,"threshold_uncertainty_score":0.46740314},"labels":[],"label_agreement":null},{"id":"W4286843333","doi":"10.1007/978-1-0716-2237-7_1","title":"Designing a Genome-Wide Association Study: Main Steps and Critical Decisions","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Genome-wide association study; Identification (biology); Context (archaeology); Association (psychology); Data science; Section (typography); Computer science; Key (lock); Psychology; Biology; Genetics; Single-nucleotide polymorphism","score_opus":0.07832245490936228,"score_gpt":0.42390736809064045,"score_spread":0.34558491318127815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4286843333","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003666449,0.8415434,0.1568364,0.000032145643,0.00022803215,0.0005554538,0.000098650446,0.000010900178,0.0003284032],"genre_scores_gemma":[0.00003185069,0.8177413,0.18141752,0.00021533907,0.000056975638,0.00011205108,0.00021928363,0.000031192867,0.00017449605],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.994031,0.004040775,0.0005257459,0.00082149735,0.00013274248,0.00044820024],"domain_scores_gemma":[0.9976672,0.0016096701,0.00020574438,0.0003805947,0.000032208907,0.00010459965],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0030268673,0.00035733986,0.0010018289,0.00023911256,0.00017738515,0.000042241238,0.0003738573,0.0005293509,0.00009984546],"category_scores_gemma":[0.0060783573,0.00033864877,0.00023839192,0.00021732775,0.000069860216,0.0000014687087,0.00073104777,0.0004384015,0.000003751184],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050229217,0.0005520997,0.005910735,0.0009931329,0.0008586452,0.00032019752,0.00022847998,0.00001470478,0.010807833,0.00028569062,0.0006068425,0.9793714],"study_design_scores_gemma":[0.00029704932,0.00056125293,0.00008482228,0.00015331212,0.00032754854,0.000028343133,0.0002628364,0.000002105357,0.000050031726,0.00045652495,0.9973513,0.00042486543],"about_ca_topic_score_codex":0.000022478129,"about_ca_topic_score_gemma":0.000009803719,"teacher_disagreement_score":0.99674445,"about_ca_system_score_codex":0.000079865276,"about_ca_system_score_gemma":0.00014936573,"threshold_uncertainty_score":0.99990654},"labels":[],"label_agreement":null},{"id":"W4288064183","doi":"10.1007/978-1-0716-2521-7_13","title":"Two-Color Fluorescent Reporters for Analysis of Alternative Splicing","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"RNA splicing; Alternative splicing; Biology; Context (archaeology); Computational biology; Minigene; Cell biology; Gene; Genetics; Messenger RNA; RNA","score_opus":0.0344364403088762,"score_gpt":0.44107225800711636,"score_spread":0.40663581769824014,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288064183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5065805,0.00024273612,0.4926522,0.00006235117,0.00008248224,0.00025035918,0.000032183238,0.0000031164457,0.000094079514],"genre_scores_gemma":[0.5253754,0.000029274132,0.47342658,0.00033595393,0.000035398443,0.00033048991,0.00028363135,0.000024331792,0.00015891717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99760014,0.0009896609,0.00042700054,0.0005082219,0.00011320619,0.00036179266],"domain_scores_gemma":[0.9991138,0.00010720269,0.00020531463,0.00043253807,0.00008254939,0.000058618505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022362059,0.00013724652,0.000394951,0.00043143844,0.00007779409,0.0000052717096,0.00033122458,0.00007072236,0.000026317157],"category_scores_gemma":[0.00054699153,0.00013792726,0.00029847608,0.00058899145,0.00009817799,0.0000013363527,0.0003578806,0.00014958292,1.2836128e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021566272,0.000062825064,0.0062359264,0.000008970547,0.0006438761,0.00001441554,0.000050130133,0.009768474,0.9762325,0.0012231587,0.000015444091,0.005528579],"study_design_scores_gemma":[0.0008836437,0.0007586601,0.0008343886,0.0000030712706,0.00015730358,0.000008932693,0.00021129358,0.018145468,0.9764909,0.0008268174,0.0014921773,0.00018731049],"about_ca_topic_score_codex":0.00027803276,"about_ca_topic_score_gemma":0.00005314895,"teacher_disagreement_score":0.019225618,"about_ca_system_score_codex":0.000054857173,"about_ca_system_score_gemma":0.00007061425,"threshold_uncertainty_score":0.562451},"labels":[],"label_agreement":null},{"id":"W4288214789","doi":"10.1007/978-1-0716-2537-8_9","title":"ColourQuant: A High-Throughput Technique to Extract and Quantify Color Phenotypes from Plant Images","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Leaf Properties and Growth Measurement","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Pipeline (software); Throughput; RGB color model; Artificial intelligence; Pixel; Computer vision; Biology; Computer science","score_opus":0.0448652943776107,"score_gpt":0.3336733811494774,"score_spread":0.2888080867718667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288214789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9096984,0.0020529437,0.08111646,0.0052925753,0.00031133604,0.0009551498,0.0003623229,0.00007109265,0.00013970274],"genre_scores_gemma":[0.58644885,0.00004876611,0.41071036,0.0020527383,0.00006171564,0.0005391947,0.00009481733,0.0000032451908,0.000040340787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99733585,0.0014641943,0.00025947607,0.0005041779,0.000115204,0.00032108792],"domain_scores_gemma":[0.99939686,0.0003379706,0.0000713964,0.00009517616,0.000025217727,0.000073406496],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013696447,0.0001636979,0.0003000293,0.000029593333,0.00019737908,0.000025189487,0.00029868938,0.0001034073,0.00034380512],"category_scores_gemma":[0.00019515582,0.000072270566,0.00005062941,0.00026600642,0.00007364191,0.000026618165,0.0004135901,0.00024720322,0.0000042580987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011831213,0.00007215108,0.001463327,0.0000027295648,0.000014980602,0.000027325683,0.00007397027,0.000013359902,0.9580494,0.0014065695,0.00007579098,0.03868209],"study_design_scores_gemma":[0.0005111225,0.0027853202,0.024688497,0.000023302042,0.000033138378,0.000035397366,0.0006411373,0.00018149342,0.8029194,0.024328746,0.14316432,0.0006881071],"about_ca_topic_score_codex":0.0027453583,"about_ca_topic_score_gemma":0.0002389166,"teacher_disagreement_score":0.3295939,"about_ca_system_score_codex":0.00005504364,"about_ca_system_score_gemma":0.000012004124,"threshold_uncertainty_score":0.41501787},"labels":[],"label_agreement":null},{"id":"W4288222132","doi":"10.1007/978-1-0716-2537-8_4","title":"Camelina sativa High-Throughput Phenotyping Under Normal and Salt Conditions Using a Plant Phenomics Platform","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Phenomics; Camelina; Camelina sativa; Environmental science; Greenhouse; Biofuel; Crop; Throughput; Agronomy; Biotechnology; Agricultural engineering; Biology; Computer science; Engineering","score_opus":0.05964911949278635,"score_gpt":0.36702575589563724,"score_spread":0.3073766364028509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4288222132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94627726,0.0006294098,0.051471625,0.0005249886,0.00018266786,0.00031604522,0.00042140437,0.000036707657,0.00013987147],"genre_scores_gemma":[0.8526634,0.000062154635,0.14492917,0.0012839485,0.000080481026,0.000086800275,0.0008655942,0.0000054623856,0.000022985001],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99683815,0.0015607374,0.00033211132,0.0005602724,0.000117400195,0.0005913415],"domain_scores_gemma":[0.9990423,0.0006068409,0.000116555064,0.00011111789,0.000028387214,0.00009484362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012894792,0.00021078099,0.00035487628,0.00007936905,0.00045671282,0.000025064823,0.00035632614,0.0001859869,0.00024289761],"category_scores_gemma":[0.00014356707,0.000115463015,0.00007146655,0.00042014083,0.00026601978,0.000042949476,0.0007541882,0.0005444404,0.0000028742036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000061915736,0.000050729293,0.0028919182,0.0000038765193,0.00003654676,0.000056972433,0.00005634957,0.0004296285,0.978329,0.010575466,0.000011896617,0.0074957204],"study_design_scores_gemma":[0.0055148588,0.0044623627,0.081743725,0.00010715845,0.00025165483,0.004322527,0.006003079,0.045676466,0.44079086,0.37598628,0.030434825,0.0047061965],"about_ca_topic_score_codex":0.00081088085,"about_ca_topic_score_gemma":0.00020438405,"teacher_disagreement_score":0.5375381,"about_ca_system_score_codex":0.00012931591,"about_ca_system_score_gemma":0.000042347143,"threshold_uncertainty_score":0.4708445},"labels":[],"label_agreement":null},{"id":"W4293568712","doi":"10.1007/978-1-0716-2707-5_20","title":"Intra-Airway Gene Delivery for Pulmonary Hypertension in Rodent Models","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pulmonary Hypertension Research and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"National Heart, Lung, and Blood Institute","keywords":"Genetic enhancement; Transgene; Pulmonary hypertension; Medicine; Gene delivery; Hypoxia (environmental); Pathogenesis; Lung; Disease; Pathological; Cancer research; Bioinformatics; Pathology; Gene; Immunology; Biology; Cardiology; Internal medicine; Chemistry; Genetics","score_opus":0.060777304111092244,"score_gpt":0.38665913459486584,"score_spread":0.3258818304837736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293568712","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74998546,0.007487805,0.23778556,0.0020520368,0.00030418503,0.0016962666,0.000058031703,0.000041463863,0.0005891936],"genre_scores_gemma":[0.4353088,0.00029116683,0.5609069,0.0021365688,0.00002711422,0.0007968386,0.00025674482,0.00003942312,0.00023648028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972619,0.0011409061,0.0003522003,0.0005589178,0.00017118052,0.00051494053],"domain_scores_gemma":[0.9991081,0.00026051627,0.000048812988,0.00038173303,0.00007172637,0.00012915085],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012021322,0.0001839299,0.00050423894,0.00047276024,0.0000858121,0.0000035668547,0.00016814958,0.00012618561,0.00007175406],"category_scores_gemma":[0.00020056577,0.00016135689,0.00014923276,0.00038209689,0.00006830269,0.000029370225,0.00029119197,0.0003704602,0.0000029948153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010384937,0.0009981085,0.0036092415,0.000023100325,0.000064207576,0.006568322,0.000020347337,0.0011222888,0.9453994,0.00034449407,0.000057319707,0.040754702],"study_design_scores_gemma":[0.018981442,0.007967358,0.016265031,0.00012814284,0.00030298549,0.007596619,0.00066272577,0.3854267,0.44147375,0.10340265,0.016419828,0.0013727822],"about_ca_topic_score_codex":0.0001979043,"about_ca_topic_score_gemma":0.000009167407,"teacher_disagreement_score":0.5039256,"about_ca_system_score_codex":0.00021117245,"about_ca_system_score_gemma":0.00012887789,"threshold_uncertainty_score":0.6579943},"labels":[],"label_agreement":null},{"id":"W4293783213","doi":"10.1007/978-1-0716-2736-5_14","title":"Analysis of Cell Cycle by Flow Cytometry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cell cycle; Flow cytometry; Cell; Cell biology; Cell cycle progression; Cytometry; Cell division; Chemistry; Biology; Molecular biology; Genetics","score_opus":0.0072056012233510935,"score_gpt":0.3593923177022505,"score_spread":0.35218671647889943,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783213","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17188756,0.0017175039,0.82441896,0.000024395667,0.000026008047,0.0001173831,0.0000466134,0.000014210873,0.0017473565],"genre_scores_gemma":[0.422159,0.00011624252,0.5760616,0.00049044675,0.000011826311,0.00009355962,0.0007601882,0.000028769431,0.00027840535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970017,0.0015940355,0.00042871048,0.0005744037,0.00011635684,0.0002847725],"domain_scores_gemma":[0.9989106,0.000057256573,0.00018678837,0.00074544246,0.00005287094,0.000047038586],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015451894,0.00017536819,0.00048248135,0.0006928693,0.00005003188,0.000005525851,0.0005022517,0.00015602582,0.00023971692],"category_scores_gemma":[0.00017605338,0.00019414115,0.000378842,0.0017938581,0.00011826938,0.0000015429869,0.00058482244,0.00020451461,7.2246604e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028324213,0.00015962239,0.0055138376,0.000005542411,0.00040567055,0.000006871854,0.000019956484,0.0012411148,0.9873252,0.000021782971,0.00039860472,0.004873467],"study_design_scores_gemma":[0.00022756943,0.0002454363,0.00016878522,5.748007e-7,0.00030575707,0.0000024450926,0.00005161543,0.0032055413,0.9840013,0.00025952997,0.011330417,0.00020103864],"about_ca_topic_score_codex":0.000084022206,"about_ca_topic_score_gemma":0.000010684063,"teacher_disagreement_score":0.2502714,"about_ca_system_score_codex":0.000035107147,"about_ca_system_score_gemma":0.000034708934,"threshold_uncertainty_score":0.7916846},"labels":[],"label_agreement":null},{"id":"W4293783216","doi":"10.1007/978-1-0716-2736-5_15","title":"Analysis of Cell Proliferation by Three-Dimensional Culture","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Alberta","funders":"","keywords":"Matrigel; 3D cell culture; Cell culture; Cell growth; Cell biology; Spheroid; Extracellular matrix; Cell; Cancer cell; Chemistry; Biology; Cancer; Biochemistry; Genetics","score_opus":0.016655917012974267,"score_gpt":0.3686323484387448,"score_spread":0.35197643142577056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783216","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12618616,0.00078757876,0.87222886,0.00004745118,0.000101258294,0.000113317285,0.000025430378,0.000031236257,0.00047870324],"genre_scores_gemma":[0.27275094,0.000010913027,0.72678757,0.00009963208,0.0000092010205,0.00008851103,0.00016370205,0.000017099152,0.00007243613],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99856675,0.00067024404,0.0002287207,0.00018131382,0.00016176052,0.00019122781],"domain_scores_gemma":[0.99957323,0.00014762062,0.000029213059,0.0001871756,0.000026987882,0.000035794154],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014286191,0.00007848545,0.0002237702,0.00033625236,0.00002887006,0.000003122598,0.00020827826,0.00009257904,0.0003015403],"category_scores_gemma":[0.0001895649,0.00007513128,0.000078262055,0.0011908185,0.00005961742,0.0000074840414,0.00016118912,0.00033491975,0.0000011396523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059132462,0.00003294067,0.0041598403,0.000013232098,0.00012526635,0.0000037536379,0.000048179376,0.025981478,0.96365434,0.00017224338,0.00017454146,0.005628258],"study_design_scores_gemma":[0.00027683776,0.0001267925,0.0008468647,0.0000023429748,0.00008172477,0.0000017190082,0.000018443336,0.3974608,0.5929353,0.0019641295,0.00611861,0.00016642215],"about_ca_topic_score_codex":0.000021988679,"about_ca_topic_score_gemma":0.000005370603,"teacher_disagreement_score":0.3714793,"about_ca_system_score_codex":0.000056735305,"about_ca_system_score_gemma":0.000017142738,"threshold_uncertainty_score":0.3301655},"labels":[],"label_agreement":null},{"id":"W4293783228","doi":"10.1007/978-1-0716-2736-5_6","title":"Cell Synchronization Techniques for Studying Mitosis","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Nocodazole; Mitosis; Cell biology; Cell cycle; Microtubule; Cell synchronization; Biology; Synchronizing; Chemistry; Cell; Computer science; Genetics; Cytoskeleton","score_opus":0.014970893476375282,"score_gpt":0.35234465538109666,"score_spread":0.3373737619047214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783228","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.038058534,0.0015055329,0.95913935,0.000091138376,0.00020586069,0.00059682596,0.000034564462,0.000021263204,0.00034691248],"genre_scores_gemma":[0.13427746,0.00011382522,0.86329794,0.0007873695,0.00007657548,0.00086714973,0.0003589146,0.000045969937,0.00017482058],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981643,0.00074841344,0.00026618896,0.00047465804,0.00005012663,0.0002963316],"domain_scores_gemma":[0.9994359,0.00004370724,0.00009936435,0.00034213613,0.00004732042,0.000031593212],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009667259,0.00015827695,0.0001982493,0.00013019456,0.00013334361,0.000009209793,0.0003013149,0.00015469237,0.000020096284],"category_scores_gemma":[0.000107826316,0.00017736672,0.00011686801,0.00018048321,0.000047951347,0.0000014648762,0.00036037804,0.00014360303,4.507788e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038260605,0.000096402146,0.0011543796,0.000017567132,0.000021730128,0.0000017627754,0.000032507094,0.0001917486,0.98059416,0.000436635,0.0002408646,0.017173957],"study_design_scores_gemma":[0.00042428088,0.0005712438,0.000022296395,0.0000025923202,0.00001919763,0.000009149406,0.00010399855,0.0005754836,0.9159607,0.0010284247,0.08105309,0.00022948223],"about_ca_topic_score_codex":0.00001885561,"about_ca_topic_score_gemma":0.0000061317733,"teacher_disagreement_score":0.09621893,"about_ca_system_score_codex":0.000052314033,"about_ca_system_score_gemma":0.00006056404,"threshold_uncertainty_score":0.7232805},"labels":[],"label_agreement":null},{"id":"W4293783364","doi":"10.1007/978-1-0716-2736-5_7","title":"Synchronization of HeLa Cells to Various Interphases Including G1, S, and G2 Phases","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cell synchronization; Interphase; Cell cycle; Mitosis; Cell biology; Synchronization (alternating current); HeLa; Synchronizing; S phase; Biology; DNA synthesis; Cell; Chemistry; DNA; DNA replication; Computer science; Genetics; Eukaryotic DNA replication; Telecommunications","score_opus":0.014753673557744562,"score_gpt":0.3657404760118933,"score_spread":0.35098680245414876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783364","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31442901,0.0013328107,0.68370384,0.00005070621,0.00014957061,0.0001845824,0.000034239412,0.000005334255,0.00010991225],"genre_scores_gemma":[0.5919631,0.00016807046,0.40690005,0.0006699623,0.000028517836,0.00006701422,0.00011152458,0.00002364437,0.00006810573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984269,0.0006190216,0.00028660506,0.00039848176,0.000051103387,0.00021787315],"domain_scores_gemma":[0.9995086,0.000044869535,0.000095413045,0.0002638319,0.00003858602,0.00004867516],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005975676,0.00014376256,0.00023414045,0.00016838081,0.000065744476,0.000006442567,0.00021088522,0.00010615251,0.000033772485],"category_scores_gemma":[0.00019254016,0.00015675374,0.000056056124,0.00021220637,0.00007578389,0.0000017000347,0.0006665374,0.000113486974,3.5315733e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059044487,0.000084590945,0.00061384385,0.000014682044,0.000033422144,0.000006585322,0.00010396745,0.00054819713,0.9780149,0.0003634992,0.00006112503,0.020096159],"study_design_scores_gemma":[0.0004464342,0.00072694576,0.000022817121,0.000009042295,0.000017999953,0.000031155236,0.00010897856,0.00046694343,0.97649163,0.0004679067,0.02102911,0.0001810232],"about_ca_topic_score_codex":0.00007375529,"about_ca_topic_score_gemma":0.000024336228,"teacher_disagreement_score":0.27753413,"about_ca_system_score_codex":0.000031018983,"about_ca_system_score_gemma":0.000049719518,"threshold_uncertainty_score":0.6392232},"labels":[],"label_agreement":null},{"id":"W4293783369","doi":"10.1007/978-1-0716-2736-5_4","title":"Flow Cytometry and Cell Cycle Analysis: An Overview","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Flow cytometry; Cell cycle; Cytometry; Biology; Cell biology; Cell; Molecular biology; Genetics","score_opus":0.07939963333752834,"score_gpt":0.4366248082380208,"score_spread":0.35722517490049244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783369","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000091971284,0.79569846,0.20329297,0.0000035972394,0.00023668428,0.00032940373,0.00009495036,0.000015171899,0.00023679147],"genre_scores_gemma":[0.000007894025,0.75571764,0.2422051,0.00018392286,0.00007209907,0.000118528296,0.0015699908,0.000070123184,0.000054691398],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99350584,0.0038977494,0.0007344594,0.0012628491,0.00010749576,0.0004915985],"domain_scores_gemma":[0.9984588,0.00012090123,0.00026577775,0.0009769318,0.00002618267,0.00015139866],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016244343,0.000582053,0.0018654086,0.00065303093,0.000088356705,0.000033202326,0.00064177025,0.00086590525,0.00012302188],"category_scores_gemma":[0.00014854257,0.000549823,0.00077492755,0.0011502951,0.00014945645,0.0000030509652,0.00040737263,0.00058551226,0.0000028775044],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020587682,0.00020392668,0.00009251112,0.0019491081,0.00081468746,0.000041212348,0.000025221374,0.00009282696,0.025411326,0.00010791723,0.000009487127,0.97123116],"study_design_scores_gemma":[0.00032971913,0.00041756046,0.0000058423316,0.00010459426,0.0018494871,0.0000329902,0.000015535958,0.00036222258,0.0014271146,0.0002798042,0.99444354,0.0007316055],"about_ca_topic_score_codex":0.0000531916,"about_ca_topic_score_gemma":0.000033301436,"teacher_disagreement_score":0.99443406,"about_ca_system_score_codex":0.00004865188,"about_ca_system_score_gemma":0.00015175133,"threshold_uncertainty_score":0.9996953},"labels":[],"label_agreement":null},{"id":"W4293783485","doi":"10.1007/978-1-0716-2736-5_3","title":"Cell Cycle-Related Clinical Applications","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Canadian Nuclear Laboratories","funders":"","keywords":"Cell cycle; Cyclin-dependent kinase; Cell division; Cell biology; Cyclin; Cell Cycle Protein; Biology; Cell; Kinase; Cancer research; Biochemistry","score_opus":0.10257421292696538,"score_gpt":0.5304937840740239,"score_spread":0.42791957114705853,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783485","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[6.149332e-7,0.7155259,0.27413365,0.000034653123,0.000642795,0.0022474083,0.00004027423,0.000099983496,0.0072746794],"genre_scores_gemma":[1.3165166e-7,0.6999452,0.29709786,0.00025343325,0.000082310755,0.0015368275,0.0006838122,0.00014256859,0.00025786945],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9891557,0.006482003,0.0021320337,0.0014187166,0.00018910774,0.0006224002],"domain_scores_gemma":[0.99619657,0.001121938,0.0007148642,0.0016770279,0.000047221914,0.00024238083],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["research_integrity"],"category_scores_codex":[0.003600192,0.00063454633,0.0033869292,0.0007396485,0.00007719034,0.000009751814,0.00060348166,0.001768404,0.0009154138],"category_scores_gemma":[0.0007574844,0.0005977519,0.0016477645,0.0015568607,0.00031415158,0.0000101349215,0.00052290264,0.003412989,0.00014387762],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012589906,0.00029942425,0.0000055959063,0.0021136138,0.00031604146,0.00025843174,0.000010581032,0.000005214925,0.00033804204,0.0011324344,0.00012003063,0.995388],"study_design_scores_gemma":[0.000917578,0.00032569107,9.4917107e-7,0.0006525936,0.0015903189,0.00036032614,0.000006694624,0.000027086318,0.00006816682,0.0013351305,0.9942365,0.00047893313],"about_ca_topic_score_codex":0.000021346503,"about_ca_topic_score_gemma":0.0000012646723,"teacher_disagreement_score":0.99490905,"about_ca_system_score_codex":0.00046186877,"about_ca_system_score_gemma":0.0009944737,"threshold_uncertainty_score":0.9999979},"labels":[],"label_agreement":null},{"id":"W4293783511","doi":"10.1007/978-1-0716-2736-5_17","title":"Assessment of Growth Plate Chondrocytes Proliferative Activity in Embryonic Endochondral Ossification via Ki-67 Immunofluorescence","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Immunofluorescence; Endochondral ossification; Cell biology; Chondrocyte; Cell growth; Proliferation Marker; Embryonic stem cell; Biology; Pathology; Cartilage; Anatomy; Immunology; Antibody; Medicine; Biochemistry","score_opus":0.0199662097043279,"score_gpt":0.38416598385876854,"score_spread":0.36419977415444066,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7966772,0.00067903847,0.20086496,0.00020544705,0.00024128724,0.0009059917,0.000015179722,0.000021150076,0.00038978708],"genre_scores_gemma":[0.6927513,0.000037915972,0.3067225,0.00006576448,0.000009079957,0.0002952508,0.000050264684,0.000013798487,0.00005414412],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99715066,0.0016885393,0.00031464896,0.00041016386,0.00014035212,0.0002956171],"domain_scores_gemma":[0.99930304,0.0001484517,0.00016322752,0.00029159075,0.000050518167,0.000043156004],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00087128027,0.00017478973,0.00047064625,0.00030188443,0.000055513017,0.0000043403993,0.00013744553,0.00010180441,0.0000724858],"category_scores_gemma":[0.000114063376,0.00016749043,0.00009452037,0.00040314975,0.00009069042,0.000041656334,0.00013529992,0.00043770118,0.0000010479548],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026425158,0.0003590672,0.01640787,0.000025455865,0.000027696677,0.00008713295,0.00021033832,0.00001400583,0.9577913,0.0042787436,6.7877056e-7,0.020533413],"study_design_scores_gemma":[0.0031763173,0.0026755414,0.02220072,0.000034655743,0.000034259694,0.00007802251,0.00012174551,0.0007762355,0.9661636,0.0045426353,0.000043573065,0.00015272576],"about_ca_topic_score_codex":0.000073935975,"about_ca_topic_score_gemma":0.000015214784,"teacher_disagreement_score":0.10585753,"about_ca_system_score_codex":0.00028187333,"about_ca_system_score_gemma":0.0001835857,"threshold_uncertainty_score":0.68300617},"labels":[],"label_agreement":null},{"id":"W4293783517","doi":"10.1007/978-1-0716-2736-5_18","title":"Detecting Cell Cycle Stage and Progression in Fission Yeast, Schizosaccharomyces pombe","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Schizosaccharomyces pombe; Cell cycle; Yeast; Biology; Schizosaccharomyces; Fission; Flow cytometry; Cell cycle progression; Cell biology; Cell; Genetics; Saccharomyces cerevisiae; Physics","score_opus":0.017275409446740404,"score_gpt":0.3972038581650624,"score_spread":0.379928448718322,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783517","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9703867,0.0034199108,0.025005974,0.000098099765,0.000114765455,0.00028822757,0.000018055021,0.000008826434,0.0006594791],"genre_scores_gemma":[0.8164416,0.0001277948,0.182878,0.00011683888,0.00003193194,0.00012697272,0.000042316497,0.000027397096,0.00020716379],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971384,0.0015526724,0.00024791755,0.0005486727,0.00011665228,0.00039573037],"domain_scores_gemma":[0.99952126,0.000040049224,0.000069898095,0.00027154517,0.000021614169,0.00007561958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001378441,0.00015762636,0.000190184,0.00019629988,0.000109830486,0.000014294337,0.00025240082,0.0001475233,0.000054721935],"category_scores_gemma":[0.0001863303,0.00015188256,0.0000485955,0.0002661693,0.00008417803,0.0000022108927,0.00092519587,0.0003798042,0.0000011792872],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011823576,0.00007945775,0.010719473,0.000023340543,0.000005470243,0.000028221624,0.000057904716,0.00034828697,0.9561709,0.000047154554,0.00000527673,0.032396246],"study_design_scores_gemma":[0.00078277156,0.0006215866,0.0013118477,0.000011012616,0.0000027611247,0.00001892429,0.00022397138,0.0012551836,0.9889751,0.0006934807,0.0058912644,0.00021209744],"about_ca_topic_score_codex":0.00004980677,"about_ca_topic_score_gemma":0.000019954006,"teacher_disagreement_score":0.15787204,"about_ca_system_score_codex":0.000026379637,"about_ca_system_score_gemma":0.00006229949,"threshold_uncertainty_score":0.6193591},"labels":[],"label_agreement":null},{"id":"W4293783784","doi":"10.1007/978-1-0716-2736-5_9","title":"Cell Cycle Synchronization of Primary and Cultured Articular Chondrocytes","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Osteoarthritis Treatment and Mechanisms","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University; St. Michael's Hospital","funders":"","keywords":"Cell cycle; Thymidine; Cell biology; Cell; Population; Aphidicolin; Cell synchronization; Chemistry; Cell culture; Mitosis; Biology; Biophysics; Biochemistry; DNA; Genetics; Medicine","score_opus":0.00956089798192403,"score_gpt":0.3158895252196749,"score_spread":0.30632862723775084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783784","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.56695276,0.010425401,0.42008933,0.00014935728,0.00017178681,0.0005411221,0.000010773757,0.000028605034,0.0016308727],"genre_scores_gemma":[0.33407968,0.00007341147,0.66519886,0.00030913588,0.0000114404675,0.00007392095,0.000102140904,0.000014987983,0.00013642901],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989783,0.00044474783,0.00017477227,0.00020192451,0.00006335918,0.00013685643],"domain_scores_gemma":[0.99969804,0.000039904775,0.000058777772,0.00014639295,0.000021450787,0.0000354542],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003180916,0.00008586624,0.00026127516,0.00009759645,0.000035971534,0.000001937653,0.000040087598,0.00006279822,0.00006864938],"category_scores_gemma":[0.00005302203,0.00007900699,0.000044186247,0.00016527319,0.000051190524,0.000011477862,0.00009263852,0.00010611566,6.7081e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005458158,0.00012049058,0.0014517114,0.000035277222,0.0000123131995,0.000055292036,0.00014533626,0.000025698593,0.97310024,0.0010399753,0.000005536061,0.02395353],"study_design_scores_gemma":[0.0029173663,0.0017876913,0.00037131473,0.000014910441,0.00007749392,0.000093226765,0.00015420449,0.00031148348,0.98953295,0.0032309375,0.0014001756,0.00010824777],"about_ca_topic_score_codex":0.000008216631,"about_ca_topic_score_gemma":7.8839736e-7,"teacher_disagreement_score":0.24510954,"about_ca_system_score_codex":0.000054172233,"about_ca_system_score_gemma":0.000034269993,"threshold_uncertainty_score":0.32218117},"labels":[],"label_agreement":null},{"id":"W4293783808","doi":"10.1007/978-1-0716-2736-5_1","title":"Cell Cycle Progression and Synchronization: An Overview","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":107,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cell cycle; Cell biology; Cyclin-dependent kinase; Cell synchronization; Cytokinesis; Prometaphase; Biology; Polo-like kinase; Telophase; Restriction point; Metaphase; Cyclin A; Prophase; Cyclin-dependent kinase 1; Cyclin B; Anaphase; Cyclin; Cell; Cell division; Genetics; Gene; Chromosome; Meiosis","score_opus":0.044964729521991674,"score_gpt":0.4472327384920093,"score_spread":0.40226800897001763,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783808","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000021142974,0.88800573,0.11082108,0.000005947783,0.00020425867,0.0006000072,0.000035007855,0.0000134022675,0.00029338585],"genre_scores_gemma":[0.000001392309,0.8063027,0.19183174,0.00012513793,0.00007352594,0.00024054575,0.0012957376,0.00007196405,0.000057246078],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.995221,0.0028817195,0.00052014145,0.00094439933,0.00007029784,0.0003624285],"domain_scores_gemma":[0.9988415,0.000053460095,0.0002689127,0.0007185439,0.000022960507,0.000094579686],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009685017,0.000432302,0.0009405611,0.0001689672,0.00008479075,0.000023104727,0.00043591976,0.000710584,0.0000894176],"category_scores_gemma":[0.00011463518,0.0003957916,0.00022261233,0.000266345,0.000116321,0.0000027910846,0.00067197956,0.00038872322,0.0000022153906],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005383709,0.000093221475,0.000008608163,0.0020229823,0.000042828084,0.000016820974,0.000010914222,0.000004752324,0.009012839,0.000405731,0.000023778686,0.9883521],"study_design_scores_gemma":[0.00020493424,0.00036950147,4.9235854e-7,0.00030331948,0.00013953647,0.00008060031,0.000008066608,0.0000517181,0.00112509,0.00027852415,0.99699616,0.0004420626],"about_ca_topic_score_codex":0.000010515458,"about_ca_topic_score_gemma":0.0000068842724,"teacher_disagreement_score":0.9969724,"about_ca_system_score_codex":0.000048619426,"about_ca_system_score_gemma":0.00019687798,"threshold_uncertainty_score":0.9998494},"labels":[],"label_agreement":null},{"id":"W4293783811","doi":"10.1007/978-1-0716-2736-5_5","title":"Synchronization of Cultured Cells to G1, S, G2, and M Phases by Double Thymidine Block","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cell synchronization; Cell cycle; Thymidine; Interphase; Mitosis; Cell biology; Population; Cell division; Cell; Biology; Flow cytometry; Synchronization (alternating current); Chemistry; Molecular biology; DNA; Genetics; Computer science; Medicine","score_opus":0.008733847015140095,"score_gpt":0.33226419669399887,"score_spread":0.3235303496788588,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783811","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36075807,0.004069233,0.63407344,0.00017062183,0.00018605414,0.000403412,0.00010680079,0.000008849375,0.00022351897],"genre_scores_gemma":[0.43435526,0.0006780675,0.56174326,0.0014077511,0.00006412151,0.00020536211,0.00075126905,0.00005578332,0.0007391499],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861985,0.00042755372,0.0002627357,0.0004107617,0.000056559868,0.00022251865],"domain_scores_gemma":[0.9995175,0.000018867177,0.000090282396,0.0002752443,0.00004355547,0.000054525568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045724388,0.00015054064,0.00023123308,0.00008634346,0.000058151487,0.000006022403,0.00020595017,0.00013320509,0.000029360555],"category_scores_gemma":[0.00005773879,0.00015357313,0.000054525495,0.00021155448,0.00006832846,0.0000014488587,0.00035859284,0.00010709091,4.049356e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010013951,0.00009785186,0.0003104886,0.000012395418,0.000034071043,0.0000021407307,0.000054783646,0.0005626374,0.9953038,0.00021710167,0.0008508088,0.002453766],"study_design_scores_gemma":[0.000754972,0.0004823628,0.000006431542,0.0000034766538,0.000016137328,0.000014234955,0.000061034847,0.00014237894,0.93549734,0.00012431062,0.06273364,0.00016368371],"about_ca_topic_score_codex":0.00006689652,"about_ca_topic_score_gemma":0.000014169489,"teacher_disagreement_score":0.07359719,"about_ca_system_score_codex":0.000021804397,"about_ca_system_score_gemma":0.000036093315,"threshold_uncertainty_score":0.62625307},"labels":[],"label_agreement":null},{"id":"W4293783813","doi":"10.1007/978-1-0716-2736-5_12","title":"Synchronization of Saccharomyces cerevisiae Cells for Analysis of Progression Through the Cell Cycle","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Cell cycle; Saccharomyces cerevisiae; Mitosis; Cell division; Biology; Cell biology; Cell Cycle Protein; Computational biology; Budding yeast; Genetics; Yeast; Cell","score_opus":0.022331055717276258,"score_gpt":0.4160580322013047,"score_spread":0.39372697648402843,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783813","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24079044,0.004016286,0.7541017,0.000099788434,0.00009719605,0.0004808053,0.00011333575,0.0000027236372,0.0002977075],"genre_scores_gemma":[0.7351733,0.00016025256,0.26418474,0.000065113156,0.000018016932,0.00014345527,0.00018655643,0.000014608791,0.00005398846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979163,0.0011135848,0.0003304419,0.00031443007,0.00011635312,0.000208905],"domain_scores_gemma":[0.9991938,0.0001094667,0.00019057932,0.00038700245,0.00009918402,0.00001997972],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010211369,0.00010713565,0.00027699574,0.00013355084,0.00007074145,0.0000037743605,0.00039115598,0.000096942604,0.000052748343],"category_scores_gemma":[0.0001117144,0.000082152714,0.00019981584,0.0006792853,0.00014120869,0.0000012144014,0.00035618042,0.00010265133,1.5942037e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008645642,0.000106294334,0.00102748,0.000045823414,0.00016198149,4.660324e-7,0.00009617124,0.012657621,0.9788101,0.0003122309,0.000030024397,0.006665361],"study_design_scores_gemma":[0.00029924914,0.0005745137,0.00012063152,0.0000032165897,0.00011249641,7.229752e-7,0.0001359148,0.0043142745,0.989768,0.0008853752,0.0036963378,0.000089232904],"about_ca_topic_score_codex":0.000030454583,"about_ca_topic_score_gemma":0.00000553195,"teacher_disagreement_score":0.49438283,"about_ca_system_score_codex":0.000013679941,"about_ca_system_score_gemma":0.00006426399,"threshold_uncertainty_score":0.33500904},"labels":[],"label_agreement":null},{"id":"W4293783859","doi":"10.1007/978-1-0716-2736-5_13","title":"Cell Cycle Synchrony Methods for Fission Yeast, Schizosaccharomyces pombe","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"","keywords":"Schizosaccharomyces pombe; Cell cycle; Yeast; Cell cycle checkpoint; Fission; Schizosaccharomyces; Biology; Cell biology; Model organism; Genetics; Cell; Saccharomyces cerevisiae; Computational biology; Gene; Physics","score_opus":0.020915128799344717,"score_gpt":0.4291451485111579,"score_spread":0.4082300197118132,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783859","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06538822,0.0059689814,0.92591923,0.00027144336,0.00046051198,0.0006035381,0.000085177664,0.000018344734,0.001284553],"genre_scores_gemma":[0.050604373,0.00011952524,0.947064,0.0004597178,0.00011665496,0.0005763992,0.00024067741,0.000059753012,0.00075893506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99522865,0.002889764,0.00036081343,0.00078583497,0.000120144396,0.00061482226],"domain_scores_gemma":[0.9989861,0.00014135221,0.000105872175,0.00056702556,0.000073095965,0.00012654923],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026610417,0.0002495895,0.0003239843,0.00019895026,0.00020778827,0.000018589375,0.0006359046,0.00022608366,0.00017602227],"category_scores_gemma":[0.00041644805,0.0002475814,0.00021436063,0.0003007527,0.00012315802,0.0000022962547,0.0009402107,0.00034320087,0.000004430106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018817448,0.00013012366,0.0002723442,0.000031304666,0.00003144348,0.000005300375,0.0000318564,0.000612733,0.9512204,0.00040076827,0.00032959747,0.046745963],"study_design_scores_gemma":[0.0008545078,0.00091221224,0.00006694637,0.00000382209,0.000013450593,0.000019935962,0.000085079286,0.0020229777,0.8667015,0.005005371,0.1240214,0.0002927852],"about_ca_topic_score_codex":0.000027385138,"about_ca_topic_score_gemma":0.000002744898,"teacher_disagreement_score":0.123691805,"about_ca_system_score_codex":0.000047334866,"about_ca_system_score_gemma":0.00015379238,"threshold_uncertainty_score":0.9999976},"labels":[],"label_agreement":null},{"id":"W4293783860","doi":"10.1007/978-1-0716-2736-5_16","title":"BrdU Incorporation Assay to Analyze the Entry into S Phase","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of Ottawa; Canadian Nuclear Laboratories","funders":"","keywords":"Bromodeoxyuridine; Immunocytochemistry; Immunohistochemistry; Molecular biology; Immunofluorescence; Staining; In vivo; Deoxyuridine; Monoclonal antibody; Chemistry; Thymidine; Antibody; In vitro; DNA; Biology; Biochemistry; Immunology; Genetics","score_opus":0.012900667305257447,"score_gpt":0.38245056494201224,"score_spread":0.3695498976367548,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783860","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2499362,0.0007332604,0.7466596,0.0017835452,0.0001150053,0.00018981632,0.0000143423285,0.00000906697,0.0005591786],"genre_scores_gemma":[0.73640513,0.000040122348,0.2594729,0.0031806561,0.00012563741,0.00025845366,0.0002486537,0.000026705076,0.0002417175],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969327,0.0019350336,0.00030517776,0.0004786628,0.000102591395,0.00024587815],"domain_scores_gemma":[0.99922043,0.00008823752,0.000098722914,0.0004890196,0.00003463417,0.00006895676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020501688,0.00015224877,0.00022418225,0.000102876,0.00014633393,0.0000150060705,0.00043108666,0.00010895421,0.00014687494],"category_scores_gemma":[0.0006213528,0.00012145153,0.00016668595,0.000485565,0.000076881595,0.0000012972331,0.00052545633,0.00019697972,0.00000405229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005915556,0.000110257904,0.001020007,0.0000021617639,0.000055869274,0.0000054919315,0.000040784325,0.00035918635,0.94773054,0.00045570623,0.00033378202,0.04982708],"study_design_scores_gemma":[0.0003936263,0.00024780168,0.00006680689,0.0000016759867,0.000033955603,0.000007771184,0.0001096649,0.00051847455,0.87315077,0.003631059,0.12163965,0.00019872627],"about_ca_topic_score_codex":0.000088034685,"about_ca_topic_score_gemma":0.000034594483,"teacher_disagreement_score":0.4871867,"about_ca_system_score_codex":0.00004817501,"about_ca_system_score_gemma":0.000044272943,"threshold_uncertainty_score":0.49526498},"labels":[],"label_agreement":null},{"id":"W4293783873","doi":"10.1007/978-1-0716-2736-5_8","title":"Synchronization of HeLa Cells to Mitotic Subphases","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Prometaphase; Telophase; Anaphase; Mitosis; Cell biology; Nocodazole; Metaphase; Cell synchronization; Cell cycle; Prophase; Premature chromosome condensation; Biology; Chemistry; Cell; Meiosis; Chromosome; Genetics","score_opus":0.010229296921892008,"score_gpt":0.3408348135022825,"score_spread":0.3306055165803905,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4293783873","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25287876,0.00073848927,0.74561894,0.00006547655,0.00025676747,0.00022682594,0.000032314376,0.0000055487017,0.00017687723],"genre_scores_gemma":[0.49098605,0.00007435514,0.5074869,0.00087714003,0.000045763285,0.0001111403,0.0001940608,0.000034645192,0.00018998678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812365,0.00088899396,0.00029544873,0.0003825789,0.00006315483,0.00024617606],"domain_scores_gemma":[0.999407,0.00003378017,0.000089285604,0.0003761479,0.00004582761,0.000047963993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006098164,0.00013481993,0.00021858908,0.00015797497,0.000047358688,0.00000375703,0.0002950163,0.00011205925,0.000060623206],"category_scores_gemma":[0.00015986474,0.00014996639,0.000088940134,0.00029749406,0.00005831261,9.681622e-7,0.000383239,0.00011356764,0.0000019056381],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045512934,0.00009470713,0.0007358146,0.000012890453,0.000025526993,0.000005165188,0.000040863997,0.0033703165,0.9892377,0.0005971737,0.00010837274,0.00572596],"study_design_scores_gemma":[0.00032987783,0.0005665848,0.000053188298,0.000003904297,0.000013089974,0.000012855148,0.00005944398,0.0002980285,0.97444785,0.00036588393,0.023682587,0.00016673944],"about_ca_topic_score_codex":0.000047686695,"about_ca_topic_score_gemma":0.000017900473,"teacher_disagreement_score":0.23813209,"about_ca_system_score_codex":0.000033179014,"about_ca_system_score_gemma":0.00006924918,"threshold_uncertainty_score":0.6115452},"labels":[],"label_agreement":null},{"id":"W4294804646","doi":"10.1007/978-1-0716-2573-6_14","title":"Pharmacogenetics of Antipsychotic Treatment in Schizophrenia","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Schizophrenia research and treatment","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"Pharmacogenetics; Schizophrenia (object-oriented programming); Antipsychotic; Adverse effect; Medicine; Antipsychotic drug; Personalized medicine; Psychiatry; Clinical trial; Psychology; Pharmacology; Bioinformatics; Internal medicine; Genotype; Biology; Genetics","score_opus":0.04547602628945148,"score_gpt":0.4554967205527171,"score_spread":0.41002069426326565,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294804646","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9795756,0.0034798505,0.015445689,0.00040327545,0.00013916721,0.000637889,0.000019165878,0.000012013613,0.0002873989],"genre_scores_gemma":[0.49170166,0.00017966123,0.50774044,0.00008731121,0.000011287173,0.00019534116,0.000028245451,0.000014520506,0.000041535524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976348,0.0013139161,0.00031601515,0.00031268847,0.0001196486,0.0003029234],"domain_scores_gemma":[0.999389,0.00014865368,0.00005597967,0.00030559878,0.00002070252,0.00008007477],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062700565,0.00013950102,0.00040834688,0.00046017344,0.000025397534,0.000001733017,0.00011540832,0.000053323925,0.00025644162],"category_scores_gemma":[0.00009141327,0.00011934393,0.00010963872,0.000542866,0.00008425071,0.000005325632,0.000093520386,0.00021574632,0.0000028177867],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0083257975,0.0014851961,0.10653969,0.000024584488,0.00018083585,0.0008868313,0.00012236586,0.0001876683,0.67784923,0.0020775653,0.0000061585943,0.2023141],"study_design_scores_gemma":[0.04391909,0.008757754,0.122031055,0.000038884853,0.00018402869,0.0003646773,0.00019887713,0.0020958537,0.79878736,0.019945325,0.0032829347,0.0003941407],"about_ca_topic_score_codex":0.000121805635,"about_ca_topic_score_gemma":0.000027551983,"teacher_disagreement_score":0.49229473,"about_ca_system_score_codex":0.00021090766,"about_ca_system_score_gemma":0.00020750386,"threshold_uncertainty_score":0.48667043},"labels":[],"label_agreement":null},{"id":"W4294804753","doi":"10.1007/978-1-0716-2573-6_20","title":"Pharmacogenomics in Children","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pharmaceutical studies and practices","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Pharmacogenomics; Drug response; Medicine; Construct (python library); Disease; Childhood cancer; Drug; Intensive care medicine; Cancer; Psychiatry; Pharmacology; Internal medicine; Computer science","score_opus":0.06794234179274242,"score_gpt":0.5128821088060495,"score_spread":0.44493976701330706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4294804753","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88847226,0.011677215,0.08536852,0.005127944,0.00041905296,0.0007658682,0.000019026587,0.00003417004,0.008115956],"genre_scores_gemma":[0.33503926,0.00088235893,0.6501936,0.01342854,0.00007964828,0.00020904062,0.000039476516,0.000029719977,0.00009840908],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980792,0.0012142189,0.00019339003,0.00022530677,0.00005084387,0.00023703347],"domain_scores_gemma":[0.9996112,0.00017975639,0.000041000756,0.00011609792,0.0000074177683,0.00004452763],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014540147,0.00008267261,0.00023117893,0.00011182084,0.000044536457,0.000002099634,0.00010585205,0.000038628725,0.00044495324],"category_scores_gemma":[0.00020803786,0.000077950055,0.000050114893,0.00028535168,0.000049156915,0.00000933405,0.0002664081,0.0004927564,0.0000037873476],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029870868,0.00025437918,0.2639715,0.000008371517,0.00011457343,0.00014619398,0.00010814918,0.000114609065,0.6169831,0.0014148111,0.00005667654,0.1165289],"study_design_scores_gemma":[0.010809471,0.0011927321,0.088362984,0.000012100968,0.00026646248,0.0009250832,0.00035567363,0.002912007,0.1761883,0.014975622,0.7032839,0.0007156421],"about_ca_topic_score_codex":0.00008632395,"about_ca_topic_score_gemma":0.0000017969611,"teacher_disagreement_score":0.7032272,"about_ca_system_score_codex":0.00008716854,"about_ca_system_score_gemma":0.000027282435,"threshold_uncertainty_score":0.4871926},"labels":[],"label_agreement":null},{"id":"W4295129662","doi":"10.1007/978-1-0716-2553-8_2","title":"Cell Death Analysis in Cancer Spheroids from a Microfluidic Device","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Polytechnique Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Spheroid; Microfluidics; Flow cytometry; Cytotoxicity; Programmed cell death; Annexin; Apoptosis; Cancer cell; Cancer; Cancer research; Nanotechnology; Chemistry; Biomedical engineering; Materials science; Medicine; Biology; Molecular biology; In vitro; Biochemistry; Internal medicine","score_opus":0.03324489772868861,"score_gpt":0.40657697156003064,"score_spread":0.37333207383134204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295129662","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44588742,0.012210678,0.5410066,0.000065273096,0.00016337448,0.00010066046,0.000022298866,0.00004098778,0.0005027075],"genre_scores_gemma":[0.2862619,0.0006476585,0.7123601,0.00028062583,0.000027578246,0.00028086212,0.000049995295,0.00004163679,0.000049707636],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99714303,0.0015933949,0.00031534242,0.00036489093,0.00013973498,0.00044358696],"domain_scores_gemma":[0.99911845,0.00044002838,0.000025387139,0.00033311956,0.00001448271,0.00006850831],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0016983113,0.00013965608,0.00035154726,0.0005091286,0.00002993062,0.00000851903,0.00047753286,0.00012990026,0.0011308066],"category_scores_gemma":[0.00019256794,0.00015190155,0.00009766367,0.0019643067,0.000052938936,0.000009979917,0.0003538296,0.0006624282,0.000006341423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007888391,0.0000353736,0.06356598,0.000013988251,0.00012231864,0.00006348844,0.00011896934,0.0075899875,0.9136998,0.0000484968,0.00006552273,0.014668176],"study_design_scores_gemma":[0.0012584149,0.00011451084,0.02929247,0.000018093975,0.00017135419,0.0000027734632,0.00020127268,0.09375525,0.82589287,0.005874186,0.042705707,0.0007130864],"about_ca_topic_score_codex":0.0029549953,"about_ca_topic_score_gemma":0.000116087635,"teacher_disagreement_score":0.17135346,"about_ca_system_score_codex":0.00030496833,"about_ca_system_score_gemma":0.000049530634,"threshold_uncertainty_score":0.9997823},"labels":[],"label_agreement":null},{"id":"W4295452672","doi":"10.1007/978-1-0716-2712-9_12","title":"A High-Throughput Strategy for T-Cell Receptor Cloning and Expression","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"T-cell receptor; Cloning (programming); clone (Java method); Biology; Gene; Plasmid; Computational biology; Expression cloning; Molecular biology; Genetics; T cell; Computer science; Peptide sequence; Immune system","score_opus":0.060910807934350865,"score_gpt":0.4576712093672733,"score_spread":0.3967604014329224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295452672","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34793907,0.002302501,0.64690346,0.00059022894,0.00028305888,0.0010310963,0.000021065873,0.000035468816,0.000894081],"genre_scores_gemma":[0.035224862,0.0001046196,0.9618911,0.0004870491,0.00007146267,0.00046664334,0.000080028294,0.00004189515,0.0016323467],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99746954,0.0014039865,0.00023581136,0.0004382256,0.000104697334,0.0003477596],"domain_scores_gemma":[0.9991393,0.00040714166,0.000057148656,0.00028611955,0.000036240184,0.00007402508],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0019270375,0.00012945951,0.00034339796,0.0001765215,0.000096463664,0.000008136437,0.00012092947,0.0001185386,0.0011762562],"category_scores_gemma":[0.00022739037,0.000120176766,0.000073726536,0.00021399508,0.00009621588,0.000012382962,0.00023944078,0.00040862607,0.0000011887472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005245065,0.00008974278,0.00037415288,0.000041806117,0.000017825125,0.000022586499,0.00015697398,0.000050431576,0.9542787,0.00086224056,0.00014956201,0.043431494],"study_design_scores_gemma":[0.0026874319,0.0017169719,0.00004643391,0.000012069834,0.000014492233,0.0000330525,0.00022845948,0.00036969894,0.93908644,0.0067868195,0.048883196,0.00013491743],"about_ca_topic_score_codex":0.00006563437,"about_ca_topic_score_gemma":0.0000014452636,"teacher_disagreement_score":0.31498766,"about_ca_system_score_codex":0.00009540633,"about_ca_system_score_gemma":0.0000827321,"threshold_uncertainty_score":0.9997368},"labels":[],"label_agreement":null},{"id":"W4295517602","doi":"10.1007/978-1-0716-2712-9_4","title":"Characterization of KIR+CD8+ Regulatory T Cells in Humans by scRNA- and TCR-seq","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"CD8; T-cell receptor; Cytotoxic T cell; Biology; Cell biology; T cell; Immunology; Immune system; Genetics; In vitro","score_opus":0.011152339191523463,"score_gpt":0.3011336511353267,"score_spread":0.2899813119438032,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295517602","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9419554,0.001297797,0.053923704,0.00012604421,0.001921406,0.00022353102,0.000018321838,0.000018561104,0.0005152424],"genre_scores_gemma":[0.98016167,0.0002483329,0.012536794,0.0012005235,0.000013670816,0.00013657763,0.0008410733,0.000039904367,0.0048214337],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968427,0.0022640685,0.00038688432,0.00028847533,0.00001870279,0.0001991942],"domain_scores_gemma":[0.99951684,0.00008663741,0.00016251151,0.00020331876,0.00002225159,0.000008450579],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009401834,0.00011943552,0.00027763224,0.00028294264,0.00006795733,0.000002929106,0.00012648015,0.00018135009,0.0008383191],"category_scores_gemma":[0.000058032478,0.00012898428,0.00004641549,0.00019931622,0.00014291666,0.000033433807,0.00014283112,0.0003848986,0.0000069873154],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104896455,0.00009725973,0.002169104,0.000008656309,0.000023401284,0.0000019858048,0.00021806583,0.0000070278898,0.99221426,0.0011167297,0.00016498026,0.0038736067],"study_design_scores_gemma":[0.0006890506,0.00020937755,0.0032857766,0.0000064643286,0.000008097079,0.0000123755535,0.00019758569,0.0000140618795,0.9407193,0.00027878876,0.054460444,0.000118676624],"about_ca_topic_score_codex":0.00008618861,"about_ca_topic_score_gemma":0.0000041551966,"teacher_disagreement_score":0.054295465,"about_ca_system_score_codex":0.000060158625,"about_ca_system_score_gemma":0.000021247606,"threshold_uncertainty_score":0.91790056},"labels":[],"label_agreement":null},{"id":"W4295900709","doi":"10.1007/978-1-0716-2667-2_12","title":"Quantification of Intracellular Citrate Concentrations with Genetically Encoded Biosensors","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biosensor; Intracellular; Cytosol; Organelle; Biochemistry; Chemistry; Biology; Computational biology; Enzyme","score_opus":0.021145472273111438,"score_gpt":0.3518918323194488,"score_spread":0.3307463600463374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4295900709","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12486032,0.00019528536,0.8697717,0.00026963427,0.000014754166,0.0001435002,0.000034384295,0.000044907873,0.004665513],"genre_scores_gemma":[0.46313936,0.00001967267,0.5365291,0.00003228858,0.00000484986,0.00016145455,0.00005593299,0.000010115291,0.00004722267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987652,0.00032369705,0.00032791385,0.0003105319,0.000083686784,0.00018902632],"domain_scores_gemma":[0.999237,0.00011415976,0.0001512737,0.00041980285,0.000043962413,0.000033829307],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004731872,0.0001063433,0.00019704299,0.00010436647,0.000067999834,0.000005661156,0.00025220923,0.00007959371,0.0015980888],"category_scores_gemma":[0.00006380965,0.00010388449,0.000047400943,0.0004529309,0.00015582467,0.0000078934145,0.000068954534,0.00023903602,7.0438085e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014881861,0.00009008323,0.00094972015,0.000010281328,0.000015107778,0.0000037351533,0.000026916061,0.00031774343,0.8315328,0.16482858,0.0000034267298,0.0022067667],"study_design_scores_gemma":[0.00017888019,0.00008399691,0.00004752832,0.0000031559864,0.000015959979,0.000011778456,0.000088606954,0.0022838882,0.9779169,0.015826756,0.0034244214,0.000118111246],"about_ca_topic_score_codex":0.000033482887,"about_ca_topic_score_gemma":0.0000035173975,"teacher_disagreement_score":0.33827904,"about_ca_system_score_codex":0.000048522244,"about_ca_system_score_gemma":0.000050761268,"threshold_uncertainty_score":0.9993146},"labels":[],"label_agreement":null},{"id":"W4296501108","doi":"10.1007/978-1-0716-2565-1_42","title":"Quantitation of Thyroglobulin in Serum Using SISCAPA and Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Thyroid Cancer Diagnosis and Treatment","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Chromatography; Thyroglobulin; Chemistry; Calibration curve; Liquid chromatography–mass spectrometry; Mass spectrometry; Detection limit; Tandem mass spectrometry; Thyroid; Medicine; Internal medicine","score_opus":0.026994234765822876,"score_gpt":0.3857105252948572,"score_spread":0.35871629052903437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296501108","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.88124603,0.010146319,0.107606515,0.00031979955,0.000117442745,0.00032506837,0.0000158278,0.000012750963,0.00021023459],"genre_scores_gemma":[0.6135908,0.00029208296,0.385877,0.00014734989,0.000011740532,0.00005142497,0.00001323216,0.000014039538,0.0000023731682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99797374,0.0009244845,0.00037691626,0.00035901263,0.000110931345,0.00025492464],"domain_scores_gemma":[0.9994101,0.000159554,0.00013447896,0.00022479241,0.000022978073,0.000048127593],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009940002,0.0001488217,0.00048767723,0.0005543814,0.00003736873,0.0000038124927,0.00007856294,0.000094290015,0.00008982009],"category_scores_gemma":[0.000099142075,0.00014375885,0.00009974017,0.0007858848,0.00009323419,0.000017314644,0.00009362239,0.00021029744,3.0133165e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017219098,0.00023049701,0.18936716,0.000040767158,0.00009682927,0.00010144236,0.00015094642,0.00020253961,0.80563253,0.0023744646,0.0000034400086,0.0016271635],"study_design_scores_gemma":[0.007122644,0.006131176,0.21167453,0.00015079377,0.0002924557,0.00020528058,0.0009559578,0.0021994847,0.7606892,0.009385362,0.0007222434,0.00047086657],"about_ca_topic_score_codex":0.00026146616,"about_ca_topic_score_gemma":0.000035603738,"teacher_disagreement_score":0.27827048,"about_ca_system_score_codex":0.000158201,"about_ca_system_score_gemma":0.00006320078,"threshold_uncertainty_score":0.5862315},"labels":[],"label_agreement":null},{"id":"W4296501183","doi":"10.1007/978-1-0716-2565-1_39","title":"Quantitation of Renin Activity in Plasma Using Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Chemistry; Chromatography; Liquid chromatography–mass spectrometry; Aldosterone; Selected reaction monitoring; Tandem mass spectrometry; Congenital adrenal hyperplasia; Mass spectrometry; Renin–angiotensin system; Internal medicine; Medicine; Blood pressure","score_opus":0.05129278906256061,"score_gpt":0.40201587511198106,"score_spread":0.35072308604942043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296501183","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71348417,0.0003365677,0.28543088,0.00017142302,0.00008854508,0.00016898666,0.0000029167368,0.000012082685,0.000304437],"genre_scores_gemma":[0.6047755,0.000018404373,0.39508536,0.00007280906,0.0000088878805,0.000009483835,0.0000112958,0.000011302486,0.00000695584],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975822,0.0014131375,0.00033667998,0.00029033108,0.00016305511,0.00021462057],"domain_scores_gemma":[0.9993612,0.0001962921,0.00014417892,0.00021042897,0.00004336343,0.00004450173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015767816,0.000120791134,0.00046237287,0.000860918,0.00004100525,0.0000023847579,0.000081692415,0.00013349287,0.00011001716],"category_scores_gemma":[0.00037631762,0.00012056999,0.00011530616,0.0010586109,0.00008525434,0.000022927266,0.000074914315,0.00031596512,6.025297e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00047916186,0.000121681296,0.015099753,0.000015086427,0.00003102685,0.00007917476,0.000070541275,0.00027500384,0.9791449,0.0017833719,0.0000021345381,0.0028982097],"study_design_scores_gemma":[0.0022644773,0.001541548,0.07461505,0.00004669491,0.000059070233,0.00015835432,0.0001504372,0.027040802,0.89068747,0.0024521828,0.0007663214,0.00021762036],"about_ca_topic_score_codex":0.00017332734,"about_ca_topic_score_gemma":0.000021161071,"teacher_disagreement_score":0.10965449,"about_ca_system_score_codex":0.00013208037,"about_ca_system_score_gemma":0.00008987966,"threshold_uncertainty_score":0.49167013},"labels":[],"label_agreement":null},{"id":"W4296501315","doi":"10.1007/978-1-0716-2565-1_19","title":"Quantitation of IgG Subclasses in Serum Using Liquid Chromatography–Tandem Mass Spectrometry (LC–MS/MS)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Blood groups and transfusion","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; St. Paul's Hospital","funders":"","keywords":"Chromatography; Liquid chromatography–mass spectrometry; Calibration curve; Tandem mass spectrometry; Chemistry; Subclass; Mass spectrometry; Matrix (chemical analysis); Antibody; Detection limit; Immunology; Medicine","score_opus":0.03110449545698471,"score_gpt":0.38874909089519394,"score_spread":0.35764459543820926,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296501315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6459067,0.0012837026,0.35199246,0.00014975348,0.0001562437,0.00021912338,0.00000682285,0.000014856372,0.00027038387],"genre_scores_gemma":[0.57316357,0.00007541307,0.42655903,0.00013310596,0.000014308467,0.00001611226,0.000017993916,0.000017405662,0.0000030508372],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741226,0.0013192496,0.00046133812,0.00036022658,0.00014738497,0.0002995351],"domain_scores_gemma":[0.99936515,0.00016841273,0.00011943848,0.00026648963,0.000036543268,0.000043982705],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016038341,0.00015381927,0.00051544816,0.00085464644,0.000047418234,0.0000033652284,0.00012405061,0.00015167055,0.00015684853],"category_scores_gemma":[0.00013874572,0.00015311364,0.00014714888,0.0014273917,0.00009526385,0.000024314255,0.000071881484,0.0003982599,4.2206986e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019477477,0.00018953746,0.09544473,0.00006293412,0.00005225682,0.000097916985,0.00011617642,0.000097958706,0.89969856,0.0033433968,0.0000010044716,0.0007007735],"study_design_scores_gemma":[0.0036012058,0.0031753567,0.056951478,0.00010429187,0.00016080691,0.00016494558,0.0005874168,0.0022415237,0.9239641,0.008235964,0.0004820712,0.0003308868],"about_ca_topic_score_codex":0.0002982319,"about_ca_topic_score_gemma":0.000046282956,"teacher_disagreement_score":0.07456657,"about_ca_system_score_codex":0.00007373125,"about_ca_system_score_gemma":0.000076515375,"threshold_uncertainty_score":0.6243793},"labels":[],"label_agreement":null},{"id":"W4296502137","doi":"10.1007/978-1-0716-2557-6_14","title":"Application of EdU-Based DNA Synthesis Assay to Measure Hepatocyte Proliferation In Situ During Liver Regeneration","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Liver physiology and pathology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"Canadian Institutes of Health Research","keywords":"Liver regeneration; Proliferating cell nuclear antigen; Hepatocyte; Deoxyuridine; Cell growth; Regeneration (biology); Thymidine; DNA synthesis; In situ; In situ hybridization; Cell biology; Molecular biology; Biology; Bromodeoxyuridine; Chemistry; Biochemistry; DNA; In vitro; Messenger RNA","score_opus":0.025675179805681722,"score_gpt":0.3438341348707757,"score_spread":0.31815895506509395,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296502137","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5541992,0.00012813359,0.4446103,0.00035587786,0.000058182068,0.0005341505,0.0000042858806,0.0000124167655,0.000097448974],"genre_scores_gemma":[0.79867816,0.000003871267,0.20000832,0.00047815204,0.000026127567,0.0007355587,0.0000492617,0.0000115866105,0.000008953392],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99544036,0.0035860064,0.000332207,0.00037204186,0.00008491657,0.00018447089],"domain_scores_gemma":[0.99927646,0.00021596365,0.00010621571,0.00030555742,0.000059908125,0.000035907797],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019825194,0.000115779236,0.0003511261,0.0003649076,0.000053206044,0.0000013781163,0.00010356274,0.00016703019,0.000034157205],"category_scores_gemma":[0.0005733254,0.00011816595,0.00005995336,0.00040017164,0.000053394884,0.000015268242,0.00007199986,0.0002489466,0.000002805727],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00049942004,0.00014656768,0.025106959,0.000043426753,0.00001575421,0.000029145316,0.00018560773,0.0023342639,0.96393305,0.0009444823,0.0000024850208,0.006758817],"study_design_scores_gemma":[0.0006041206,0.0002806014,0.025291659,0.000014625492,0.000029129815,0.000023830395,0.000022576562,0.00424577,0.9685877,0.0007232084,0.000073679475,0.00010308939],"about_ca_topic_score_codex":0.00004798624,"about_ca_topic_score_gemma":0.000043591193,"teacher_disagreement_score":0.24460196,"about_ca_system_score_codex":0.00013077701,"about_ca_system_score_gemma":0.0000936531,"threshold_uncertainty_score":0.48186678},"labels":[],"label_agreement":null},{"id":"W4296793714","doi":"10.1007/978-1-0716-2565-1_5","title":"Quantitation of Aldosterone in Serum or Plasma Using Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hormonal Regulation and Hypertension","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia Hospital; St. Paul's Hospital; University of British Columbia","funders":"","keywords":"Aldosterone; Chromatography; Chemistry; Liquid chromatography–mass spectrometry; Primary aldosteronism; Mass spectrometry; Tandem mass spectrometry; Calibration curve; Detection limit; Internal medicine; Medicine","score_opus":0.05681825064037353,"score_gpt":0.4037937264725604,"score_spread":0.34697547583218685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296793714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78142786,0.00056406937,0.21702917,0.00042081656,0.0001261611,0.00024260687,0.0000053419653,0.0000149243015,0.00016904666],"genre_scores_gemma":[0.52270883,0.000028675986,0.47696534,0.0002229716,0.000011940325,0.000011197407,0.000018461504,0.000015571537,0.000016996199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997709,0.0011118322,0.0004646528,0.00029811604,0.00016958827,0.00024684507],"domain_scores_gemma":[0.99935955,0.0001778319,0.00014274355,0.00022143712,0.000047626192,0.000050797535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001340375,0.00013498837,0.0005008573,0.0008811316,0.000041167674,0.000002948161,0.000095327174,0.0001358352,0.00024445157],"category_scores_gemma":[0.0003185668,0.000120456534,0.00009734973,0.0010988237,0.000083737614,0.00002249307,0.00009028659,0.00027005596,0.0000010461503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006838085,0.000109054105,0.013244865,0.000027412223,0.000040634735,0.00016650108,0.000095848634,0.00024391526,0.9817252,0.0014399306,0.0000035708456,0.002219248],"study_design_scores_gemma":[0.007467799,0.0061439313,0.07712291,0.00016926022,0.00016758293,0.0008220393,0.0008622021,0.04379293,0.8556029,0.0038435871,0.0034614853,0.0005433275],"about_ca_topic_score_codex":0.00007893422,"about_ca_topic_score_gemma":0.000027793358,"teacher_disagreement_score":0.25993615,"about_ca_system_score_codex":0.000114743365,"about_ca_system_score_gemma":0.00010125379,"threshold_uncertainty_score":0.4912075},"labels":[],"label_agreement":null},{"id":"W4296982023","doi":"10.1007/978-1-0716-2675-7_22","title":"Live Fluorescence Visualization of Cellulose and Pectin in Plant Cell Walls","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Plant cell; Cell wall; Visualization; Cellulose; Live cell imaging; Cell; Biological system; Plant biology; Biology; Biophysics; Nanotechnology; Chemistry; Materials science; Computer science; Botany; Artificial intelligence; Biochemistry","score_opus":0.0200510091832271,"score_gpt":0.30287396399172845,"score_spread":0.28282295480850134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4296982023","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9962146,0.0007858095,0.0024208964,0.000074643074,0.00008682654,0.00016469911,0.000054461583,0.00000848339,0.00018953446],"genre_scores_gemma":[0.97224057,0.00017186471,0.027254742,0.00014622517,0.000012952916,0.000023107688,0.00009089998,0.0000011610161,0.00005848432],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981759,0.0010773584,0.00023459448,0.00025742932,0.000061734296,0.00019297116],"domain_scores_gemma":[0.9994581,0.00036724037,0.00009376209,0.00004090639,0.000009904198,0.000030095696],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009526406,0.000089660425,0.00019516287,0.000041026262,0.000036851336,0.000005218564,0.00016932933,0.00007150598,0.00020847644],"category_scores_gemma":[0.00006378802,0.000044892775,0.000031798274,0.00029147792,0.000041718973,0.000013579305,0.00017130005,0.00013919781,9.451752e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000286637,0.000067529945,0.018359132,0.000006486418,0.0000019259778,0.000019932273,0.00020017748,0.000019603322,0.96905226,0.001267503,0.0000060084026,0.01097081],"study_design_scores_gemma":[0.00036356208,0.00078887667,0.026062416,0.000017318403,0.000009237348,0.000027917667,0.00061784673,0.0032197535,0.95815897,0.007399612,0.0030201082,0.00031440082],"about_ca_topic_score_codex":0.0012372031,"about_ca_topic_score_gemma":0.00016603922,"teacher_disagreement_score":0.024833845,"about_ca_system_score_codex":0.000018913563,"about_ca_system_score_gemma":0.000006891399,"threshold_uncertainty_score":0.22826709},"labels":[],"label_agreement":null},{"id":"W4297174761","doi":"10.1007/978-1-0716-2675-7_9","title":"Immunofluorescence Labeling of Skeletal Muscle in Development, Regeneration, and Disease","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research; Stem Cell Network; Muscular Dystrophy Canada; E-Rare; University of Missouri","keywords":"Skeletal muscle; Multinucleate; Myosin; Biology; Immunostaining; Myocyte; Cell biology; Regeneration (biology); Immunofluorescence; Pathology; Staining; Immunology; Anatomy; Antibody; Immunohistochemistry; Medicine; Genetics","score_opus":0.0123976065345714,"score_gpt":0.3336497457215401,"score_spread":0.3212521391869687,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297174761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9022871,0.005836409,0.09136614,0.00013135768,0.00009929306,0.00016497694,0.000008146574,0.0000043382393,0.00010222341],"genre_scores_gemma":[0.781435,0.0001415119,0.21770431,0.00042614763,0.000010979075,0.00010976643,0.0001347885,0.000012868898,0.000024631427],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982932,0.0008659741,0.0002677597,0.00034156133,0.000041206287,0.00019029061],"domain_scores_gemma":[0.9996109,0.00002871366,0.00007149636,0.00021460836,0.000021292624,0.000052974126],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007207718,0.00010633784,0.00015736483,0.0001061529,0.00006398726,0.0000021802216,0.00016049066,0.00007358026,0.00002651422],"category_scores_gemma":[0.00043350027,0.0001173601,0.000033815475,0.00015598332,0.00012556746,0.0000019151405,0.00029916706,0.0001305426,2.1013851e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007216567,0.00006940877,0.007760634,0.00001331716,0.000010412119,0.0000042082297,0.0000708367,0.0006195705,0.9770299,0.000984615,0.000009827565,0.013355063],"study_design_scores_gemma":[0.002359694,0.00054015545,0.053070806,0.000020896134,0.000016995069,0.000008488145,0.0003418679,0.00067179895,0.9085757,0.014406215,0.019326974,0.0006604192],"about_ca_topic_score_codex":0.000027774868,"about_ca_topic_score_gemma":0.000018913004,"teacher_disagreement_score":0.12633817,"about_ca_system_score_codex":0.000012764898,"about_ca_system_score_gemma":0.00015162124,"threshold_uncertainty_score":0.4785806},"labels":[],"label_agreement":null},{"id":"W4297239514","doi":"10.1007/978-1-0716-2695-5_8","title":"Analysis of Aptamer-Small Molecule Binding Interactions Using Isothermal Titration Calorimetry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"thermodynamics and calorimetric analyses","field":"Chemistry","cited_by":25,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"","keywords":"Isothermal titration calorimetry; Aptamer; Chemistry; Titration; Molecule; Calorimetry; Nucleic acid; Small molecule; Isothermal process; Thermodynamics; Physical chemistry; Biochemistry; Organic chemistry; Molecular biology","score_opus":0.04099219791442467,"score_gpt":0.3999252087360311,"score_spread":0.35893301082160645,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297239514","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48108152,0.00018830395,0.51728827,0.000006410803,0.00006952156,0.000023129714,0.000038598024,0.000010788694,0.0012934436],"genre_scores_gemma":[0.79600453,0.0000069737707,0.20367621,0.0000509747,0.000016439511,0.000018330815,0.00010925316,0.00002158023,0.00009574025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99841046,0.0005213923,0.00041703152,0.00033268027,0.00009751479,0.00022091498],"domain_scores_gemma":[0.9991651,0.00020578546,0.00023518095,0.000321077,0.000039665905,0.000033185213],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0006314335,0.00013968471,0.00041216292,0.0010105016,0.000085753156,0.000008097614,0.00025917773,0.00008726494,0.0010593128],"category_scores_gemma":[0.00014782698,0.00015294497,0.00029274583,0.0022520158,0.00006777099,0.000018546678,0.00017974328,0.00032199302,7.733993e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021317728,0.000090098256,0.0065353466,0.000007970381,0.00070158567,0.000010164417,0.00008982818,0.008393137,0.97857517,0.001192116,4.043186e-7,0.0043828553],"study_design_scores_gemma":[0.0003545951,0.00005300066,0.00034294993,0.0000061801225,0.0011952225,0.000010018054,0.0007199497,0.34807026,0.6480127,0.0005671359,0.00034162862,0.00032634698],"about_ca_topic_score_codex":0.000929647,"about_ca_topic_score_gemma":0.00003344653,"teacher_disagreement_score":0.33967713,"about_ca_system_score_codex":0.00016973607,"about_ca_system_score_gemma":0.000043542695,"threshold_uncertainty_score":0.99985385},"labels":[],"label_agreement":null},{"id":"W4297456973","doi":"10.1007/978-1-0716-2643-6_7","title":"Conventional Receptor Radioligand Binding Techniques Applied to the Study of Monoamine Oxidase","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Radioligand; Radioligand Assay; Chemistry; Monoamine oxidase; Ligand (biochemistry); Allosteric regulation; Ligand binding assay; Biophysics; Binding site; Monoamine oxidase A; Cofactor; Membrane; Receptor; Biochemistry; Biology; Enzyme","score_opus":0.01635951551239256,"score_gpt":0.3590407177718289,"score_spread":0.3426812022594363,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297456973","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86910874,0.0012562461,0.12685655,0.00046436407,0.00034415434,0.0011225713,0.00003685819,0.000018259381,0.0007922718],"genre_scores_gemma":[0.7658346,0.00009369211,0.23243973,0.0005313215,0.0000795879,0.00061072496,0.00009494164,0.000031693784,0.00028365306],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99803233,0.00096325093,0.00031949684,0.00038111888,0.0000879824,0.00021581564],"domain_scores_gemma":[0.99944764,0.000046854882,0.00010719132,0.00033136885,0.000034104152,0.000032830863],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00140403,0.00014699534,0.0002484327,0.00013142884,0.00014814429,0.0000041003345,0.00034007189,0.00011573988,0.000029557725],"category_scores_gemma":[0.000120291756,0.00011227249,0.00007536997,0.00031752375,0.00009879416,5.653354e-7,0.0005925227,0.00023502606,0.0000013243481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011682759,0.00023504718,0.0010013448,0.0000048718925,0.00012686184,0.000002672523,0.00020813553,0.000098457014,0.991072,0.00048831006,0.0003912293,0.006254263],"study_design_scores_gemma":[0.0006730454,0.001261603,0.0002525403,0.0000036321035,0.000023518705,0.000009937329,0.0013567905,0.000009109564,0.94723433,0.0001591299,0.04884215,0.00017418226],"about_ca_topic_score_codex":0.000020738833,"about_ca_topic_score_gemma":0.0000073617894,"teacher_disagreement_score":0.10558318,"about_ca_system_score_codex":0.000022395327,"about_ca_system_score_gemma":0.00002588553,"threshold_uncertainty_score":0.45783392},"labels":[],"label_agreement":null},{"id":"W4297458511","doi":"10.1007/978-1-0716-2643-6_5","title":"Radiochemical Assay of Monoamine Oxidase Activity","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial metabolism and enzyme function","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Chemistry; Substrate (aquarium); Monoamine oxidase; Amine gas treating; Incubation; Chromatography; Aqueous solution; Solvent; Organic solvent; Liquid scintillation counting; Biogenic amine; Cationic polymerization; Enzyme; Organic chemistry; Biochemistry; Chemical engineering; Biology","score_opus":0.013260119624316226,"score_gpt":0.340963286309538,"score_spread":0.32770316668522176,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297458511","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52650416,0.0009679291,0.4717522,0.00006991737,0.0003020932,0.00012079478,0.00004548806,0.0000065023723,0.0002309177],"genre_scores_gemma":[0.689683,0.00006844062,0.3092076,0.00039753137,0.000104687104,0.00010100042,0.00017584866,0.000032591488,0.00022928424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972589,0.001758796,0.00025014064,0.00041250093,0.000067707624,0.0002519569],"domain_scores_gemma":[0.99935377,0.000045124067,0.000115205934,0.00040819903,0.00003164516,0.000046065987],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014190009,0.00014879668,0.00027969442,0.000114950766,0.00004553687,0.0000021101398,0.00025091736,0.00015696196,0.000101388825],"category_scores_gemma":[0.00041725364,0.00015745105,0.00012527085,0.00023455755,0.00010318837,0.0000016022509,0.00036994755,0.00022461647,9.3433005e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019209883,0.00013081775,0.00052350893,0.000009584902,0.000030076984,0.000004428928,0.000015849515,0.00015506818,0.9856767,0.00036506113,0.00038932727,0.012507483],"study_design_scores_gemma":[0.00054165913,0.00024983642,0.00029681713,0.0000015302214,0.000014005898,0.000024394123,0.00001696708,0.00009419642,0.95934135,0.0004468491,0.038818683,0.00015369982],"about_ca_topic_score_codex":0.00005418185,"about_ca_topic_score_gemma":0.0000031515397,"teacher_disagreement_score":0.16317886,"about_ca_system_score_codex":0.000023255974,"about_ca_system_score_gemma":0.0000499731,"threshold_uncertainty_score":0.6420668},"labels":[],"label_agreement":null},{"id":"W4297459087","doi":"10.1007/978-1-0716-2643-6_10","title":"Detecting Monoamine Oxidase A and B Proteins: A Western Blotting Protocol and Some Practical Considerations","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Parkinson's Disease Mechanisms and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Monoamine oxidase; Gene isoform; Blot; Messenger RNA; Monoamine neurotransmitter; Monoamine oxidase A; Enzyme; Biology; Biochemistry; Chemistry; Cell biology; Gene; Computational biology; Molecular biology; Serotonin; Receptor","score_opus":0.04971848647906605,"score_gpt":0.44354978895048114,"score_spread":0.39383130247141507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297459087","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6812726,0.00053045305,0.2718658,0.0017934348,0.000052254258,0.044298958,0.000016325335,0.000075338685,0.00009481013],"genre_scores_gemma":[0.16067599,0.0000023311334,0.77448976,0.0007978785,0.000018954399,0.06397061,0.0000053114345,0.000020037642,0.000019108176],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980009,0.0010861336,0.00023194311,0.00038728828,0.00007194785,0.00022175889],"domain_scores_gemma":[0.99937516,0.00024473033,0.000089810805,0.00016470435,0.000022187065,0.00010340703],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083372026,0.00013773849,0.00027450072,0.00014327849,0.00016427928,0.000016780976,0.000018652345,0.00006455184,0.000032690827],"category_scores_gemma":[0.0010174727,0.00012460774,0.000032339416,0.00010189352,0.000066936904,0.00003424479,0.00019632647,0.00026142824,4.970477e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026441956,0.00044487612,0.016077042,0.000101096775,0.00012382794,0.0019207579,0.00023108434,0.0000035892751,0.9477586,0.003700163,0.0000017285699,0.029372787],"study_design_scores_gemma":[0.031457968,0.0092819175,0.023991087,0.00024676987,0.0007295252,0.012234988,0.0010287889,0.010214235,0.734699,0.15764569,0.017177915,0.0012920934],"about_ca_topic_score_codex":0.000029401774,"about_ca_topic_score_gemma":0.000004818553,"teacher_disagreement_score":0.5205967,"about_ca_system_score_codex":0.0000478682,"about_ca_system_score_gemma":0.000087327215,"threshold_uncertainty_score":0.5081356},"labels":[],"label_agreement":null},{"id":"W4297461107","doi":"10.1007/978-1-0716-2643-6_11","title":"An (Immuno) Fluorescence Protocol for Monitoring Monoamine Oxidase A/B Protein Distribution Within the Cell","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Monoamine oxidase; Compartmentalization (fire protection); Immunofluorescence; Mitochondrion; Biology; Green fluorescent protein; Subcellular localization; Cell biology; Protein subcellular localization prediction; Biochemistry; Endogeny; Fusion protein; Monoamine oxidase B; Cell; Antibody; Enzyme; Chemistry; Recombinant DNA; Gene; Genetics","score_opus":0.04272309682716518,"score_gpt":0.40493261645271283,"score_spread":0.36220951962554765,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4297461107","genre_codex":"methods","genre_gemma":"protocol","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12825654,0.000020342108,0.7859797,0.0002736052,0.00023955967,0.08501121,0.00005882924,0.00008613738,0.000074080446],"genre_scores_gemma":[0.16060589,4.2522015e-7,0.34858352,0.00025348476,0.00004365875,0.49036437,0.000021227954,0.00003519507,0.00009221105],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9956165,0.0031046376,0.0002968178,0.00051891827,0.0001173707,0.00034577557],"domain_scores_gemma":[0.99906194,0.00026321612,0.0001453896,0.00046792143,0.00002128719,0.000040246916],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015716706,0.00016471735,0.00016468418,0.00006379271,0.00033704762,0.000029767147,0.0006944053,0.00007075894,0.000020236803],"category_scores_gemma":[0.0008959688,0.00012847062,0.00007137934,0.00042522987,0.0001710622,0.000046687914,0.00020638753,0.00035418815,0.0000013416442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016572204,0.00018020098,0.00010915747,0.00001977392,0.0000013711269,0.000007919023,0.00012276597,0.0002906542,0.9877803,0.0046493695,0.00000609262,0.006666729],"study_design_scores_gemma":[0.00091303454,0.00052128406,0.00013180826,0.000006427527,0.0000018153034,0.000005535918,0.00014485992,0.0027123704,0.984458,0.007471441,0.0034737883,0.00015958023],"about_ca_topic_score_codex":0.000025314072,"about_ca_topic_score_gemma":8.980696e-7,"teacher_disagreement_score":0.43739617,"about_ca_system_score_codex":0.0000760583,"about_ca_system_score_gemma":0.00005760104,"threshold_uncertainty_score":0.523888},"labels":[],"label_agreement":null},{"id":"W4298126852","doi":"10.1007/978-1-0716-2647-4_9","title":"Analysis of FOXP3 DNA Methylation Patterns to Identify Functional FOXP3+ T-Cell Subpopulations","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"FOXP3; DNA methylation; Biology; Epigenetics; Enhancer; Bisulfite sequencing; Methylation; DNA demethylation; Promoter; Gene; Population; Genetics; Transcription factor; Immune system; Cell biology; Gene expression","score_opus":0.031012547751780205,"score_gpt":0.40186751436828927,"score_spread":0.3708549666165091,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298126852","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48552856,0.00042517678,0.51347077,0.000050220267,0.00016479407,0.00014959846,0.000061533436,0.0000047070316,0.00014461981],"genre_scores_gemma":[0.87842286,0.000031678817,0.11982857,0.00017903725,0.000037804366,0.00012954955,0.0012371539,0.0000237453,0.000109600274],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968509,0.0015866137,0.00055078405,0.0005693121,0.00017696594,0.00026543313],"domain_scores_gemma":[0.9989958,0.000095421965,0.00021955749,0.00050263887,0.00011396576,0.00007262784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017109239,0.000176384,0.00034772052,0.00074906443,0.000105206505,0.000009506247,0.00024906883,0.00015963582,0.00019697881],"category_scores_gemma":[0.00026474046,0.00020234962,0.0002725461,0.0011804992,0.000040362043,0.0000029167243,0.0003379583,0.00015517992,0.0000014532654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041403408,0.0000906948,0.08675805,0.0000063806665,0.00018668103,0.0000013801891,0.0000564467,0.03900043,0.8691583,0.00032789545,0.000008912444,0.0043633976],"study_design_scores_gemma":[0.00041202453,0.00032836953,0.15221204,0.0000017864165,0.00026354784,9.617768e-7,0.00009596086,0.0015164153,0.8397594,0.0018845295,0.0032562918,0.00026865813],"about_ca_topic_score_codex":0.00012037548,"about_ca_topic_score_gemma":0.00010764829,"teacher_disagreement_score":0.39364222,"about_ca_system_score_codex":0.000049966406,"about_ca_system_score_gemma":0.000053119897,"threshold_uncertainty_score":0.8251578},"labels":[],"label_agreement":null},{"id":"W4298326631","doi":"10.1007/978-1-0716-2593-4_44","title":"Acute and Chronic Pain Preclinical Models to Study the Analgesic Properties of Melatonergic Compounds","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pain Mechanisms and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Analgesic; Medicine; Pharmacology; Melatonin; Chronic pain; Neuropathic pain; Perioperative; Analgesic agents; Anesthesia; Bioinformatics; Internal medicine; Biology; Physical therapy","score_opus":0.0916553333832296,"score_gpt":0.4288827388342215,"score_spread":0.3372274054509919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298326631","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7552403,0.0026888344,0.2405398,0.0005445469,0.000055429697,0.0008642502,0.0000035897872,0.000011285204,0.000051918483],"genre_scores_gemma":[0.85674226,0.000027870303,0.14232713,0.00055998977,0.000008271987,0.0002849367,0.0000038643493,0.000012536181,0.000033122913],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99483865,0.004262138,0.0003000691,0.00030390025,0.000106706895,0.00018852357],"domain_scores_gemma":[0.99933386,0.00019226258,0.000063500025,0.00033790857,0.000023036479,0.000049418508],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003938176,0.00012097963,0.00039864247,0.00010663214,0.00008102702,0.0000031354716,0.00014228934,0.000050240116,0.000016833055],"category_scores_gemma":[0.00011335825,0.00007564642,0.000062448446,0.00024473193,0.000083604915,0.000007853938,0.00029355523,0.00022200494,3.054848e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045207207,0.0010060067,0.005457919,0.000022738332,0.00094791263,0.00014841353,0.001564112,0.0006285147,0.9527914,0.0033603797,0.0000074163304,0.03361314],"study_design_scores_gemma":[0.017370783,0.047378454,0.0066915476,0.00012489673,0.0022074487,0.00037158406,0.0056648473,0.08142866,0.755269,0.081379056,0.001191156,0.0009225571],"about_ca_topic_score_codex":0.000052504947,"about_ca_topic_score_gemma":0.00000827905,"teacher_disagreement_score":0.19752237,"about_ca_system_score_codex":0.00006325687,"about_ca_system_score_gemma":0.000059268288,"threshold_uncertainty_score":0.30847713},"labels":[],"label_agreement":null},{"id":"W4298326694","doi":"10.1007/978-1-0716-2593-4_42","title":"Photothrombotic Mouse Models for the Study of Melatonin as a Therapeutic Tool After Ischemic Stroke","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Melatonin; Neuroprotection; Stroke (engine); Medicine; Neurodegeneration; Neuroscience; Pharmacology; Internal medicine; Biology; Disease","score_opus":0.04729510317202381,"score_gpt":0.3745345017106953,"score_spread":0.3272393985386715,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298326694","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7383542,0.0011808382,0.25859827,0.000082712744,0.0001956906,0.0013106389,0.000033982968,0.00001930128,0.00022434555],"genre_scores_gemma":[0.97047853,0.00002254844,0.026336838,0.0011097379,0.000011784923,0.0016614085,0.000001195514,0.000035701272,0.00034224906],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967153,0.0018787916,0.00036432504,0.0005246036,0.00014942512,0.00036757058],"domain_scores_gemma":[0.99815184,0.0010901382,0.0001236294,0.00058242655,0.000019491841,0.000032491622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012811066,0.00017729218,0.00034415076,0.00015424615,0.00012671018,0.000010565247,0.00046129088,0.00007981573,0.00011648778],"category_scores_gemma":[0.00030210378,0.00014035967,0.00014229216,0.0003274267,0.00015346045,0.000032014465,0.00025844396,0.00035509732,0.000002041895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016861931,0.0002718972,0.00033255137,0.000007170156,0.000032297055,0.000019791532,0.0013604867,0.0032110193,0.97709846,0.014191603,0.000003908168,0.0033022007],"study_design_scores_gemma":[0.0012939341,0.0007518039,0.00009489068,0.000002237443,0.00005456251,0.000039451446,0.000766108,0.011187954,0.9788105,0.0044792346,0.0023330892,0.00018624253],"about_ca_topic_score_codex":0.00004334472,"about_ca_topic_score_gemma":0.0000040138434,"teacher_disagreement_score":0.23226142,"about_ca_system_score_codex":0.000054697244,"about_ca_system_score_gemma":0.000070134345,"threshold_uncertainty_score":0.5723701},"labels":[],"label_agreement":null},{"id":"W4298326979","doi":"10.1007/978-1-0716-2593-4_16","title":"Analysis of the Human Pineal Proteome by Mass Spectrometry","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Proteome; Pineal gland; Proteomics; Melatonin; Computational biology; Biology; Mass spectrometry; Bioinformatics; Cell biology; Chemistry; Neuroscience; Biochemistry; Chromatography; Gene","score_opus":0.01479616712820515,"score_gpt":0.3898209908404722,"score_spread":0.3750248237122671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298326979","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0803764,0.00012338748,0.91735387,0.00015865345,0.000010296429,0.00015651101,0.00009363226,0.000024655019,0.001702577],"genre_scores_gemma":[0.093240984,0.0000050525637,0.9058105,0.00010070537,0.000006475319,0.00052671845,0.00007291651,0.000013444735,0.00022324348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989391,0.00029199457,0.00027027994,0.00026585013,0.00006849827,0.00016430978],"domain_scores_gemma":[0.9991983,0.000051872048,0.00017263829,0.0005449516,0.000014884668,0.000017309534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00050918484,0.0000915933,0.00024865544,0.0001399645,0.00009816753,0.000002582234,0.00049157575,0.00007246207,0.00058768934],"category_scores_gemma":[0.000055500343,0.00007912509,0.00016505923,0.0011101753,0.000098699646,0.0000053574922,0.00027684623,0.0003435389,1.3258763e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028939107,0.000039292005,0.0039165826,0.00000554793,0.00008861867,6.561851e-7,0.000012035481,0.00017265546,0.9884092,0.0068525122,0.000009820891,0.0004901901],"study_design_scores_gemma":[0.0000925711,0.000020323967,0.000081019956,0.000001090182,0.000068014946,0.0000011899929,0.000023338083,0.00033955387,0.96296924,0.033067077,0.003249149,0.0000874127],"about_ca_topic_score_codex":0.00004501506,"about_ca_topic_score_gemma":0.0000015833562,"teacher_disagreement_score":0.026214564,"about_ca_system_score_codex":0.00008100051,"about_ca_system_score_gemma":0.000013645616,"threshold_uncertainty_score":0.6434786},"labels":[],"label_agreement":null},{"id":"W4298327010","doi":"10.1007/978-1-0716-2593-4_43","title":"Hypnotic Effects of Melatonergic Compounds Measured in Mice or Rats","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Circadian rhythm and melatonin","field":"Neuroscience","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Melatonin; Circadian rhythm; Hypnotic; Pharmacology; Medicine; Psychology; Neuroscience; Internal medicine","score_opus":0.03622367349001127,"score_gpt":0.36129876588689774,"score_spread":0.3250750923968865,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298327010","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95261824,0.0020782559,0.042671416,0.00014495477,0.00089977623,0.0005190808,0.000007573808,0.000031916297,0.0010287669],"genre_scores_gemma":[0.93241596,0.000027923,0.066622265,0.0006580444,0.0000112282205,0.00012582251,0.0000024014118,0.000024133225,0.0001122004],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9927647,0.0057646413,0.00040370124,0.0005197571,0.00014884544,0.00039833813],"domain_scores_gemma":[0.9979534,0.0015250358,0.00013046876,0.00031858197,0.00001321104,0.00005931718],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014986529,0.00016855574,0.000459761,0.00042326885,0.000059968752,0.0000052321916,0.0003667714,0.00011648691,0.000048001693],"category_scores_gemma":[0.0019255027,0.00015922608,0.00009075586,0.0010838788,0.00018093755,0.000023388015,0.00023574974,0.00042937955,0.000003596664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009500462,0.000120559256,0.0010895233,0.000037259873,0.0000050722592,0.00046723278,0.00026798534,0.0003682612,0.97959036,0.015658256,0.0000057940642,0.0022946664],"study_design_scores_gemma":[0.0009898761,0.000249048,0.0010705787,0.000015586129,0.000009877378,0.00012228971,0.000032822547,0.00044053586,0.99230903,0.0031375184,0.0014483825,0.0001744579],"about_ca_topic_score_codex":0.000043237626,"about_ca_topic_score_gemma":0.000010893653,"teacher_disagreement_score":0.023950847,"about_ca_system_score_codex":0.00010491791,"about_ca_system_score_gemma":0.000107556625,"threshold_uncertainty_score":0.6493051},"labels":[],"label_agreement":null},{"id":"W4298504505","doi":"10.1007/978-1-0716-3523-0","title":"Bacteriophage Therapy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Illinois at Urbana-Champaign; Sociedad Española de Enfermedades Infecciosas y Microbiología Clínica; Hospices Civils de Lyon; Institució Catalana de Recerca i Estudis Avançats; Siberian Branch, Russian Academy of Sciences; Ontario Veterinary College, University of Guelph; University College Cork; Carl von Ossietzky Universität Oldenburg; Universiteit Gent; Instituto de Salud Carlos III; University of the West of England; San Diego State University; Institut Català de Nanociència i Nanotecnologia; Technische Universiteit Delft; Universidade do Minho; Barcelona Institute of Science and Technology","keywords":"Bacteriophage; Computer science; Biology; Genetics","score_opus":0.025866271508874963,"score_gpt":0.3980103090486139,"score_spread":0.37214403753973896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4298504505","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7918034,0.0000660922,0.19857201,0.00047969221,0.0005416178,0.00018330212,0.000006158757,0.00010055684,0.008247131],"genre_scores_gemma":[0.12207333,0.00031847632,0.87264204,0.0021160408,0.000048504528,0.00009347752,0.000044073025,0.000043225537,0.0026208493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99891394,0.00040544645,0.00014856264,0.00025234267,0.000025437406,0.00025424562],"domain_scores_gemma":[0.9996592,0.00006725849,0.000031755848,0.00020515049,0.0000023550085,0.00003429761],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.00046924964,0.000093415016,0.00012573537,0.00006759856,0.00003571053,0.00001062567,0.0001733696,0.00008954423,0.0027970052],"category_scores_gemma":[0.000050185437,0.00008258408,0.000058922076,0.00041075086,0.00010022246,0.000036109086,0.00015887542,0.00012540085,0.0007910323],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005842038,0.00001574412,0.0010315503,5.506275e-7,0.0000041159487,0.000020127869,0.00006231368,0.000018110572,0.9176666,0.0000829087,0.00013613941,0.08095598],"study_design_scores_gemma":[0.0004023659,0.0001069984,0.120926864,0.000004756739,0.0000030162266,0.000021357138,0.000032002114,0.00019285128,0.6440343,0.0035155748,0.23052302,0.00023684956],"about_ca_topic_score_codex":0.00017526207,"about_ca_topic_score_gemma":0.000023051349,"teacher_disagreement_score":0.67407,"about_ca_system_score_codex":0.00003933397,"about_ca_system_score_gemma":0.000003441334,"threshold_uncertainty_score":0.99998695},"labels":[],"label_agreement":null},{"id":"W4301798683","doi":"10.1007/978-1-59745-395-0","title":"Immunological Tolerance","year":2007,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, Stanford University; Université de Montréal; National Cancer Institute; University of Toronto; Medical Research Council; Universität Wien; University of Minnesota; Sunnybrook Research Institute; Università degli Studi di Milano-Bicocca; McGill University; Medizinische Universität Wien; Universidade de Lisboa; University of Pittsburgh; University of Oxford","keywords":"Biology","score_opus":0.02336534441791228,"score_gpt":0.3616123054729422,"score_spread":0.33824696105502994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4301798683","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006237738,0.029943153,0.4641122,0.00007938156,0.010411693,0.0003757551,0.0000064813703,0.00012653148,0.49488243],"genre_scores_gemma":[0.00004699457,0.00055834226,0.08299514,0.0013701491,0.000081154445,0.000049077207,0.0007362706,0.000066918845,0.91409594],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99621755,0.0015907029,0.0007902743,0.00074503105,0.000028242715,0.00062820717],"domain_scores_gemma":[0.9984423,0.0005110364,0.0003153997,0.00061672187,0.00009542566,0.000019136507],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0014642038,0.00047748024,0.00087310583,0.0005557652,0.000075785276,0.000010354693,0.00045757042,0.0027112802,0.0036760154],"category_scores_gemma":[0.00035989488,0.00043869184,0.00032599273,0.00014822888,0.000513814,0.000028803652,0.00020787578,0.0021329364,0.0013324071],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025963728,0.00008508861,0.000025337944,0.000020050305,0.0001892847,0.000048864014,0.000045282188,0.0000038538587,0.89868945,0.021702746,0.010051183,0.068879195],"study_design_scores_gemma":[0.0006873214,0.00027784312,0.000040646668,0.00006448689,0.000033732005,0.00013127331,0.000014797375,0.0000023479172,0.12673946,0.008016818,0.86358565,0.00040563822],"about_ca_topic_score_codex":0.000027803948,"about_ca_topic_score_gemma":0.000004948462,"teacher_disagreement_score":0.85353446,"about_ca_system_score_codex":0.00027543504,"about_ca_system_score_gemma":0.00013655104,"threshold_uncertainty_score":0.99980646},"labels":[],"label_agreement":null},{"id":"W4304889920","doi":"10.1007/978-1-0716-2617-7_12","title":"Application of GeneCloudOmics: Transcriptomic Data Analytics for Synthetic Biology","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"","keywords":"Transcriptome; Computational biology; Profiling (computer programming); Gene expression profiling; RNA-Seq; Biology; Computer science; Gene; Gene expression; Bioinformatics; Genetics","score_opus":0.05431122725318199,"score_gpt":0.4148817058128662,"score_spread":0.3605704785596842,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304889920","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021241529,0.001770439,0.97567827,0.0002179708,0.0002515108,0.00046139164,0.00025526286,0.00000770555,0.00011595401],"genre_scores_gemma":[0.5069904,0.0001431161,0.49014503,0.00038035822,0.000057261193,0.0004864949,0.0017169233,0.000032252534,0.000048174676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779296,0.00083567563,0.00041295946,0.0006782785,0.000049743987,0.0002303534],"domain_scores_gemma":[0.99852693,0.00005928762,0.00019768007,0.0011260258,0.000052977666,0.000037069898],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014035772,0.00014017876,0.0002631181,0.00016028027,0.00006369448,0.000003274154,0.000817761,0.00016023984,0.000018168743],"category_scores_gemma":[0.00018599947,0.00014827334,0.00009664492,0.00022698667,0.00012389354,0.0000016445922,0.0003424801,0.00011609678,3.9906928e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001336711,0.000073159135,0.00081527606,0.000015650397,0.000038576603,1.6769262e-7,0.000019293344,0.00061162,0.9637875,0.004255322,0.00011141296,0.030138383],"study_design_scores_gemma":[0.00097597716,0.00038464722,0.00010412694,0.0000025135428,0.000044530156,0.0000076201027,0.000120265184,0.01370551,0.78829587,0.007112286,0.18902352,0.00022311912],"about_ca_topic_score_codex":0.000021605589,"about_ca_topic_score_gemma":0.000008441422,"teacher_disagreement_score":0.48574886,"about_ca_system_score_codex":0.00003009488,"about_ca_system_score_gemma":0.000102385886,"threshold_uncertainty_score":0.6046411},"labels":[],"label_agreement":null},{"id":"W4304889921","doi":"10.1007/978-1-0716-2617-7_18","title":"Machine Learning and Hybrid Methods for Metabolic Pathway Modeling","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; National Research Council Canada","funders":"","keywords":"Computer science; Metabolic network; Machine learning; Artificial intelligence; Metabolomics; Flux (metallurgy); Bioinformatics; Biology; Chemistry","score_opus":0.041793805062359066,"score_gpt":0.4193644341780352,"score_spread":0.3775706291156761,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304889921","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000050014933,0.5104936,0.48860666,0.0000053950475,0.0003922659,0.00041818,0.000035575595,0.000017446886,0.000025920295],"genre_scores_gemma":[6.9619756e-7,0.53330475,0.46545497,0.000024592855,0.0001531701,0.00030088655,0.00057430554,0.00007223235,0.00011438545],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99408966,0.003482171,0.0007111072,0.001163482,0.00005025332,0.00050335214],"domain_scores_gemma":[0.99905556,0.000103909246,0.0002494329,0.0004675867,0.000039956296,0.000083531486],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0041333996,0.00057004875,0.0016006031,0.0003562493,0.000120405464,0.000021886832,0.00033224875,0.00046705818,0.000021338055],"category_scores_gemma":[0.0016118101,0.0005222301,0.0004899781,0.00027658188,0.00007259712,0.0000022817571,0.00044219033,0.0006901503,5.961572e-7],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011878113,0.000020356036,5.6606353e-7,0.00086914666,0.00015283488,0.0000019404285,0.0000064422143,0.00018698174,0.16922532,0.00036156786,0.000002373892,0.8291606],"study_design_scores_gemma":[0.00025096536,0.00016740673,1.7767709e-8,0.00010991343,0.00027077118,0.0001507946,0.000005425436,0.0020986036,0.015765322,0.0003747525,0.9802751,0.0005309407],"about_ca_topic_score_codex":0.000026127198,"about_ca_topic_score_gemma":0.0000013621448,"teacher_disagreement_score":0.9802727,"about_ca_system_score_codex":0.000027950431,"about_ca_system_score_gemma":0.000116009185,"threshold_uncertainty_score":0.9997229},"labels":[],"label_agreement":null},{"id":"W4304891263","doi":"10.1007/978-1-0716-2663-4_18","title":"Single-Molecule Tracking of RNA Polymerase In and Out of Condensates in Live Bacterial Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Polymerase; RNA polymerase; RNA; Fluorophore; Biophysics; Cell biology; Computational biology; Bacteria; Biology; Tracking (education); Chemistry; Nanotechnology; Gene; Biochemistry; Physics; Materials science; Genetics; Fluorescence; Optics","score_opus":0.019249532382885123,"score_gpt":0.32230518585538237,"score_spread":0.30305565347249724,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4304891263","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9939175,0.0014365205,0.0039291093,0.00007724364,0.0003174704,0.00022497348,0.000041695683,0.0000047557905,0.000050689607],"genre_scores_gemma":[0.9420089,0.00011372164,0.05766,0.00008732843,0.000021531812,0.000028108949,0.000045725756,0.000026437474,0.000008237192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975863,0.0010477282,0.00055919064,0.00044977397,0.000056504447,0.00030047607],"domain_scores_gemma":[0.99939054,0.00005623527,0.00020369621,0.00028803968,0.000030477851,0.00003098999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080912997,0.00017763418,0.0004395309,0.00028801564,0.000014672494,0.000004455489,0.00025784862,0.00032153612,0.000030205369],"category_scores_gemma":[0.00016656391,0.0001938855,0.000067821384,0.0002116583,0.00026302563,0.0000017476527,0.00046896978,0.00022620718,1.2971299e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022409853,0.00018015952,0.001980906,0.000020555566,0.000020278547,0.000020500094,0.00018336298,0.000035831057,0.9897857,0.00010378518,0.000001852745,0.0074430215],"study_design_scores_gemma":[0.0010785636,0.000937645,0.0005268292,0.0000119266215,0.00000675371,0.000009014583,0.00021087343,0.00003709162,0.99586445,0.00053698313,0.00059993507,0.00017990926],"about_ca_topic_score_codex":0.00016607255,"about_ca_topic_score_gemma":0.00015668113,"teacher_disagreement_score":0.05373089,"about_ca_system_score_codex":0.000022175303,"about_ca_system_score_gemma":0.00005963875,"threshold_uncertainty_score":0.79064214},"labels":[],"label_agreement":null},{"id":"W4306168134","doi":"10.1007/978-1-0716-2663-4_3","title":"Numerical Techniques for Applications of Analytical Theories to Sequence-Dependent Phase Separations of Intrinsically Disordered Proteins","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research","keywords":"Intrinsically disordered proteins; Statistical physics; Spinodal; Langevin dynamics; Sequence (biology); Function (biology); Computer science; Physics; Phase (matter); Chemistry; Biology; Quantum mechanics","score_opus":0.02801818639414738,"score_gpt":0.461203147558377,"score_spread":0.4331849611642296,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306168134","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.060046718,0.00011619963,0.93801045,0.00028737343,0.00001435346,0.0012173809,0.00011987766,0.000007627575,0.00017999568],"genre_scores_gemma":[0.3848962,0.000011775203,0.6124527,0.00010895575,0.000019437051,0.0022832844,0.000110927635,0.000014035699,0.00010274406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983107,0.00065770117,0.000371311,0.0003305646,0.000099413504,0.00023030167],"domain_scores_gemma":[0.9992562,0.0000992826,0.00009322249,0.00036240614,0.00012448164,0.000064431566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010386944,0.00010475832,0.00026291644,0.00016156147,0.00006707306,0.000004030538,0.00032612347,0.00008760582,0.000017600456],"category_scores_gemma":[0.0006584991,0.00010097074,0.000107216576,0.0003448552,0.00015327691,0.000001599004,0.00024456906,0.00012820367,1.9914135e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026343885,0.00026838758,0.00020260474,0.000018259809,0.00003706537,9.439399e-7,0.00003172633,0.00020771827,0.94920486,0.024472926,0.000015781054,0.025276298],"study_design_scores_gemma":[0.00048131807,0.0021432736,0.0000158014,0.0000032557552,0.000011619995,0.0000045796887,0.00009404388,0.00078798516,0.97788095,0.010420473,0.008036052,0.00012063058],"about_ca_topic_score_codex":0.000041185205,"about_ca_topic_score_gemma":0.000008882275,"teacher_disagreement_score":0.32555783,"about_ca_system_score_codex":0.00002510958,"about_ca_system_score_gemma":0.00013911216,"threshold_uncertainty_score":0.41174674},"labels":[],"label_agreement":null},{"id":"W4306730552","doi":"10.1007/978-1-0716-2788-4_31","title":"Fluorescence Polarization-Based Competition Assays to Evaluate Histone Deacetylase 6 Inhibitors","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dairy Farmers of Ontario; University of Toronto","funders":"","keywords":"HDAC6; Acetylation; Histone deacetylase; Fluorescence anisotropy; HDAC10; Histone; Chemistry; Small molecule; Biochemistry; Computational biology; Cell biology; Biology; Cancer research","score_opus":0.01984529187038603,"score_gpt":0.3969581044235418,"score_spread":0.37711281255315576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306730552","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42035085,0.00053778145,0.57635975,0.00090450735,0.000552185,0.0007267704,0.00007422277,0.000038106384,0.00045581878],"genre_scores_gemma":[0.43901667,0.0000097102875,0.5567439,0.0019623118,0.0001454985,0.0007409995,0.00077540905,0.0001006548,0.0005048623],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9932941,0.004237079,0.0005246089,0.0009454253,0.00036535994,0.00063342875],"domain_scores_gemma":[0.99862874,0.00010856929,0.00013156625,0.00076048146,0.0001676419,0.00020299922],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0032305752,0.00029640747,0.0003391822,0.0005219714,0.00027449318,0.000018932244,0.00057033205,0.00022462088,0.00020676068],"category_scores_gemma":[0.0013444218,0.0003474712,0.00016314506,0.0008624397,0.00020669607,0.0000037781892,0.0005970795,0.00049951795,0.000025872056],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018003894,0.0001806079,0.000735169,0.000013224402,0.000019488394,0.00003547218,0.00005124772,0.00627402,0.9873424,0.0005980001,0.00045666186,0.004113676],"study_design_scores_gemma":[0.0009961152,0.00083757617,0.00016168966,0.000011499103,0.000012635381,0.000022787817,0.0000520766,0.0022628554,0.96549803,0.00024878947,0.02948437,0.00041160066],"about_ca_topic_score_codex":0.0001616638,"about_ca_topic_score_gemma":0.00004873871,"teacher_disagreement_score":0.029027708,"about_ca_system_score_codex":0.0002862238,"about_ca_system_score_gemma":0.00038958053,"threshold_uncertainty_score":0.9998977},"labels":[],"label_agreement":null},{"id":"W4306731896","doi":"10.1007/978-1-0716-2788-4_11","title":"Evaluation of Small-Molecule HDAC Inhibitors Through In Vitro and In Cellulo Approaches","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Histone Deacetylase Inhibitors Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dairy Farmers of Ontario; University of Toronto","funders":"","keywords":"ADME; In vitro; Membrane permeability; Small molecule; Drug discovery; Chemistry; Histone deacetylase; Metabolic stability; Histone; Pharmacology; Biology; Biochemistry; Computational biology; Cell biology; Membrane; Gene","score_opus":0.0804663408143461,"score_gpt":0.4008934459548271,"score_spread":0.320427105140481,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306731896","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9691197,0.0037140523,0.025443114,0.00011605351,0.00011607909,0.0006164013,0.000015583457,0.000004499495,0.0008544861],"genre_scores_gemma":[0.86185765,0.000049769475,0.13744095,0.00007732735,0.00002546791,0.00038895337,0.00010664679,0.00003175257,0.000021469934],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99169666,0.006327043,0.0005564188,0.000702127,0.00029740372,0.00042038134],"domain_scores_gemma":[0.9992556,0.000081150116,0.00012779875,0.0004183202,0.00007446108,0.000042692405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0073872283,0.00020106055,0.0003611452,0.0003825522,0.000042802316,0.000005793905,0.00027711174,0.00023793202,0.000019807228],"category_scores_gemma":[0.0009143458,0.00022787691,0.00007974425,0.0005958635,0.0002393709,0.0000036822964,0.0005622373,0.00035089403,4.977634e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018174408,0.0001912086,0.00096705987,0.000021503334,0.000018580733,0.000016357759,0.0002964513,0.0014919685,0.9846139,0.000097346725,0.000009373132,0.012094493],"study_design_scores_gemma":[0.0014534792,0.000244434,0.00025469332,0.000008402868,0.0000134740485,0.000014958594,0.0003717154,0.0038531155,0.99181205,0.0012508301,0.00050948927,0.00021338386],"about_ca_topic_score_codex":0.00028506547,"about_ca_topic_score_gemma":0.00017095597,"teacher_disagreement_score":0.11199783,"about_ca_system_score_codex":0.00019004196,"about_ca_system_score_gemma":0.00027049845,"threshold_uncertainty_score":0.92925507},"labels":[],"label_agreement":null},{"id":"W4306910300","doi":"10.1007/978-1-0716-2815-7_14","title":"MicroRNA Regulatory Network Analysis Using miRNet 2.0","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":114,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University Health Centre; McGill University","funders":"","keywords":"microRNA; Gene regulatory network; Computational biology; Context (archaeology); Regulation of gene expression; Biology; Gene; Gene expression; Computer science; Genetics","score_opus":0.02336332203324069,"score_gpt":0.39432068138032916,"score_spread":0.37095735934708846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4306910300","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0871867,0.004552575,0.9069838,0.000078435616,0.00037884538,0.00036096445,0.00002991207,0.000020467096,0.00040829775],"genre_scores_gemma":[0.14439233,0.00009979076,0.8527073,0.0013798488,0.00021252854,0.00022930054,0.00047521546,0.000110006746,0.0003936806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99384,0.003599053,0.00049483834,0.0010029481,0.00023142365,0.000831743],"domain_scores_gemma":[0.9985417,0.000048049533,0.00017786528,0.0010265523,0.000076746364,0.00012904718],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0027913714,0.00029954128,0.0004955862,0.00051827106,0.0002236885,0.000019502562,0.0006799712,0.00032247676,0.000305507],"category_scores_gemma":[0.00018728698,0.00035373867,0.00041584432,0.0018955653,0.00016808124,0.0000022939284,0.0011639606,0.0005735741,0.0000026669857],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000117382384,0.00005447068,0.0005266856,0.000005751904,0.00055746734,0.000046364952,0.00002253326,0.09729157,0.89790004,0.00082669215,0.00018119307,0.0024698474],"study_design_scores_gemma":[0.0013106357,0.00064499705,0.0003959062,0.0000069717894,0.0004000451,0.00012765786,0.00011728261,0.013562613,0.90304315,0.0040501365,0.075462826,0.0008777552],"about_ca_topic_score_codex":0.0001267545,"about_ca_topic_score_gemma":0.000048367398,"teacher_disagreement_score":0.08372895,"about_ca_system_score_codex":0.00018846667,"about_ca_system_score_gemma":0.0002278743,"threshold_uncertainty_score":0.99989146},"labels":[],"label_agreement":null},{"id":"W4307159495","doi":"10.1007/978-1-0716-2659-7_11","title":"The Use of Small Molecules to Dissect Developmental and Regenerative Processes in Axolotls","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Supramolecular Self-Assembly in Materials","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Organism; Biology; Model organism; Cognitive science; Computational biology; Evolutionary biology; Psychology; Genetics; Gene","score_opus":0.06288461817766389,"score_gpt":0.3735829238710477,"score_spread":0.3106983056933838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307159495","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8278323,0.00051811396,0.17068236,0.00020095504,0.0002165732,0.00047810053,0.000022728045,0.000018222117,0.000030693962],"genre_scores_gemma":[0.13824403,0.00002845402,0.8608178,0.00037526846,0.00000746775,0.00047682057,0.000008232408,0.000026092546,0.000015838148],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9942089,0.004221921,0.000533128,0.00051146635,0.00012957749,0.00039506215],"domain_scores_gemma":[0.998515,0.00094283605,0.00014847182,0.0002774971,0.00006532771,0.000050841933],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026850316,0.00019625622,0.0003736545,0.00020162351,0.00014109747,0.000057064553,0.00046455674,0.00007603583,0.000037264974],"category_scores_gemma":[0.002586676,0.00015841285,0.000029924657,0.00056578324,0.00017319893,0.0000384595,0.0007791655,0.00013558069,0.0000020889506],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010922953,0.000045642068,0.0013820651,0.000021153175,0.000010014726,0.000042407388,0.00083139597,0.00089996454,0.9930665,0.0019232903,0.000007959189,0.0016603909],"study_design_scores_gemma":[0.00025035624,0.00020109768,0.00067693763,0.000013965932,0.0000061105684,0.000036700058,0.00041798886,0.0000841333,0.9940655,0.0021714747,0.0018808623,0.00019484588],"about_ca_topic_score_codex":0.00020134708,"about_ca_topic_score_gemma":0.00025286488,"teacher_disagreement_score":0.6901354,"about_ca_system_score_codex":0.00010038095,"about_ca_system_score_gemma":0.00016533732,"threshold_uncertainty_score":0.6459888},"labels":[],"label_agreement":null},{"id":"W4307642788","doi":"10.1007/978-1-0716-2597-2_35","title":"In Vivo Analysis of a Biomolecular Condensate in the Nervous System of C. elegans","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Neurological Disorders and Stroke; Canadian Institutes of Health Research","keywords":"Stress granule; Biology; Liquid liquid; Chemistry; Computational biology; Cell biology; Genetics; Gene; Messenger RNA; Chromatography","score_opus":0.018032734378648923,"score_gpt":0.38573298811005774,"score_spread":0.3677002537314088,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307642788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8931512,0.001080666,0.10498066,0.00010786613,0.00004879625,0.0002836842,0.000039716753,0.0000023741886,0.00030498486],"genre_scores_gemma":[0.9759893,0.000029414958,0.02352174,0.00023123006,0.0000076739425,0.00011635162,0.000038562375,0.000014394842,0.00005135497],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99440795,0.0040648663,0.0005811147,0.00040572666,0.00017015245,0.0003702019],"domain_scores_gemma":[0.99904567,0.000119398064,0.00016743089,0.0005893255,0.00004662321,0.00003153208],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0037448201,0.00014784103,0.0005127958,0.0008137896,0.000029301893,0.0000043403684,0.0006123515,0.00013486228,0.000025767959],"category_scores_gemma":[0.00027076618,0.00012559624,0.00021682843,0.0019902023,0.00015104256,0.0000018695306,0.00029007567,0.00024924573,1.6617928e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011291316,0.000099945755,0.0087260865,0.00003220992,0.00018686552,0.000114278635,0.00015512,0.0028173516,0.9851043,0.0021661264,0.000009042213,0.00047571916],"study_design_scores_gemma":[0.0009312076,0.00060068263,0.0023008545,0.000012209349,0.000092095936,0.00003138181,0.0014523878,0.005664969,0.9873308,0.0002886418,0.0010944637,0.00020029942],"about_ca_topic_score_codex":0.0011269097,"about_ca_topic_score_gemma":0.00030394725,"teacher_disagreement_score":0.08283803,"about_ca_system_score_codex":0.000047809248,"about_ca_system_score_gemma":0.00008510003,"threshold_uncertainty_score":0.5121666},"labels":[],"label_agreement":null},{"id":"W4307643086","doi":"10.1007/978-1-0716-2597-2_9","title":"Microfluidic Chamber Technology to Study Missorting and Spreading of Tau Protein in Alzheimer’s Disease","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre","funders":"","keywords":"Microtubule; Tau protein; Neuroscience; Microfluidics; Reuptake; Disease; Cell biology; Chemistry; Biology; Biophysics; Alzheimer's disease; Nanotechnology; Biochemistry; Materials science; Medicine; Pathology","score_opus":0.04202525252317403,"score_gpt":0.4391027848000624,"score_spread":0.39707753227688836,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307643086","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9623586,0.032616142,0.0023409738,0.00058582955,0.000023196486,0.0020008017,0.000013402518,0.000020025627,0.000041021183],"genre_scores_gemma":[0.9322058,0.000037235735,0.066795275,0.000108139044,0.000005901039,0.0008079205,0.0000125055685,0.000022951106,0.0000042861975],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741954,0.0012065374,0.00037031647,0.00047582967,0.00013114102,0.0003966175],"domain_scores_gemma":[0.999275,0.00007656578,0.0000747613,0.00034585255,0.00003470958,0.00019309256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000974997,0.00015730775,0.0004353847,0.00072960847,0.00005623347,0.0000028983025,0.00010744552,0.000062140214,0.000054886445],"category_scores_gemma":[0.0004895728,0.00014921714,0.000050143666,0.00078741566,0.00010947711,0.000011902164,0.00046278792,0.0002874848,0.0000015901915],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00069536944,0.0014317259,0.5206699,0.000027554319,0.0011927158,0.0024683909,0.00033830298,0.0000030228955,0.44616088,0.0002995277,0.0000047609974,0.02670787],"study_design_scores_gemma":[0.015161231,0.008531083,0.26627797,0.00024640773,0.0013930907,0.00024766434,0.0044491612,0.00024105748,0.6884471,0.01333785,0.00075658486,0.0009107559],"about_ca_topic_score_codex":0.00014152091,"about_ca_topic_score_gemma":0.0000042977717,"teacher_disagreement_score":0.2543919,"about_ca_system_score_codex":0.00006708043,"about_ca_system_score_gemma":0.00011762813,"threshold_uncertainty_score":0.6084899},"labels":[],"label_agreement":null},{"id":"W4307730320","doi":"10.1007/978-1-0716-2795-2_8","title":"Isolation of Genes Encoding Carbon Metabolism Pathways from Complex Microbial Communities","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Metagenomics; Carbon source; Raw material; Organism; Bacteria; Isolation (microbiology); Carbon fibers; Biochemical engineering; Microbial metabolism; Biotechnology; Biology; Computational biology; Gene; Microbiology; Computer science; Biochemistry; Engineering; Genetics; Ecology","score_opus":0.029386522889044173,"score_gpt":0.3110975611967151,"score_spread":0.2817110383076709,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307730320","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7600713,0.002988319,0.23593664,0.00003390714,0.00059900904,0.00012957845,0.00008457998,0.000013250209,0.00014344382],"genre_scores_gemma":[0.68094116,0.0001284122,0.3182205,0.00006915763,0.00013544786,0.00002864924,0.0004434728,0.000019376912,0.000013825174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978075,0.001291709,0.00034505813,0.00028397958,0.00005850005,0.0002132381],"domain_scores_gemma":[0.99937195,0.000020119343,0.00013692868,0.0004003351,0.000045684414,0.000024981868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077247847,0.00016466784,0.00030683732,0.00014957722,0.000074626296,0.0000053705835,0.000280716,0.00012779397,0.00004020274],"category_scores_gemma":[0.000070905495,0.0001793125,0.0000990011,0.00018933447,0.00009823812,0.0000016842099,0.00033078113,0.00019735469,2.2818814e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005380521,0.000054471748,0.0005416892,0.00000819375,0.00004767867,0.0000010200158,0.0002248937,0.0015809227,0.9929706,0.00035956834,0.000011832514,0.0041453103],"study_design_scores_gemma":[0.00039435935,0.00012816953,0.00041207892,0.0000038657704,0.000024590703,0.000012332889,0.00035359617,0.0005588237,0.98201084,0.00044651818,0.015461334,0.00019349321],"about_ca_topic_score_codex":0.0009329919,"about_ca_topic_score_gemma":0.000038041904,"teacher_disagreement_score":0.082283854,"about_ca_system_score_codex":0.000019300476,"about_ca_system_score_gemma":0.00003441774,"threshold_uncertainty_score":0.7312151},"labels":[],"label_agreement":null},{"id":"W4307841121","doi":"10.1007/978-1-0716-2795-2_17","title":"DNA-, RNA-, and Protein-Based Stable-Isotope Probing for High-Throughput Biomarker Analysis of Active Microorganisms","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Stable-isotope probing; Biology; Computational biology; Amplicon; DNA sequencing; Amplicon sequencing; Microorganism; Genome; Metagenomics; Gene; 16S ribosomal RNA; Genetics; Bacteria; Polymerase chain reaction","score_opus":0.019498753001703978,"score_gpt":0.33234576012837685,"score_spread":0.3128470071266729,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307841121","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66718966,0.000039716786,0.33174893,0.00016648603,0.00005142989,0.0005963536,0.00007892692,0.000008940523,0.000119551856],"genre_scores_gemma":[0.6144227,0.0000018703955,0.3846503,0.00045998828,0.0000024005565,0.00025891344,0.00014793608,0.000013700945,0.000042235755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959577,0.0029977937,0.00029744665,0.0004027029,0.000042766933,0.0003016467],"domain_scores_gemma":[0.99899524,0.00043004478,0.00018863613,0.0003410306,0.000013379169,0.00003165736],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001515345,0.00015081007,0.00046630946,0.00020897714,0.00020568674,0.0000038754183,0.00034408728,0.00013813633,0.0016852851],"category_scores_gemma":[0.00015790893,0.00015284678,0.00009721029,0.0008157334,0.0004049559,0.00002481303,0.00060593715,0.0002411222,0.0000010397118],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020220054,0.00012728939,0.0013011984,0.000011406426,0.00020203693,0.000002362424,0.00025910873,0.0019835571,0.9911013,0.0007583824,0.00001982708,0.004031295],"study_design_scores_gemma":[0.00087620254,0.0005818558,0.007865472,0.000003183209,0.00020919225,0.0000021135095,0.00013595053,0.0016243535,0.97187257,0.0135232955,0.0030505543,0.00025526856],"about_ca_topic_score_codex":0.00070334726,"about_ca_topic_score_gemma":0.00034253302,"teacher_disagreement_score":0.052901343,"about_ca_system_score_codex":0.00012320856,"about_ca_system_score_gemma":0.000029623656,"threshold_uncertainty_score":0.9992273},"labels":[],"label_agreement":null},{"id":"W4307844367","doi":"10.1007/978-1-0716-1967-4_14","title":"Robust Prediction and Protein Selection with Adaptive PENSE","year":2021,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Statistical Methods and Inference","field":"Mathematics","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Outcome (game theory); Selection (genetic algorithm); Computer science; Process (computing); Quality (philosophy); Data mining; Machine learning; Artificial intelligence; Mathematics","score_opus":0.0978398837078772,"score_gpt":0.41291203452283826,"score_spread":0.31507215081496104,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4307844367","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02212732,0.000090208916,0.97625613,0.00008811438,0.00003424555,0.00021422603,0.0000073263514,0.000028389393,0.00115404],"genre_scores_gemma":[0.0044547594,0.0000062783715,0.99528164,0.00006884975,0.000014658794,0.00007085422,0.0000028690038,0.000013794048,0.00008628892],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99738294,0.0018712438,0.00019456366,0.0003198723,0.00005383252,0.00017752656],"domain_scores_gemma":[0.9990448,0.0006093239,0.000059912414,0.00013475826,0.00010858508,0.000042628362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093772635,0.000113005386,0.00023422841,0.000058837697,0.00003572066,0.000011162985,0.000040849543,0.00013056086,0.000054992666],"category_scores_gemma":[0.0026933227,0.00009119887,0.000019135132,0.00024300176,0.00010504603,0.000017016939,0.00004599328,0.00021069447,6.3170114e-7],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008711961,0.00007890946,0.0011685396,0.000044067892,0.000041852945,0.0000543502,0.00011004631,0.000049337978,0.34410304,0.6153775,0.00001246527,0.03887278],"study_design_scores_gemma":[0.00043622067,0.0005083532,0.00081417203,0.000057666082,0.00003151879,0.0000971914,0.00009080994,0.008496766,0.12170738,0.8674444,0.0001665642,0.00014894483],"about_ca_topic_score_codex":0.000018470426,"about_ca_topic_score_gemma":0.000018139595,"teacher_disagreement_score":0.2520669,"about_ca_system_score_codex":0.000027240703,"about_ca_system_score_gemma":0.00005027623,"threshold_uncertainty_score":0.3718982},"labels":[],"label_agreement":null},{"id":"W4308455072","doi":"10.1007/978-1-0716-2819-5_14","title":"Phasing DNA Methylation","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Haplotype; Genetics; DNA methylation; Biology; DNA sequencing; Computational biology; DNA; Nanopore sequencing; Allele; Gene","score_opus":0.022947428184672363,"score_gpt":0.3936139779758468,"score_spread":0.3706665497911744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308455072","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27107686,0.0030331784,0.723621,0.00011710182,0.00031931355,0.0001671984,0.000008404723,0.000011262124,0.0016456672],"genre_scores_gemma":[0.44637373,0.000093549585,0.5524728,0.00038999825,0.00008773804,0.00012314129,0.0002454063,0.000037424143,0.00017625267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969039,0.0019424744,0.0003072391,0.00046557182,0.00009493721,0.00028587985],"domain_scores_gemma":[0.999387,0.000052919917,0.00011187797,0.0003656368,0.000036746915,0.000045819223],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019374831,0.00014921959,0.00018234533,0.00016508391,0.00012793457,0.000010238917,0.00023297388,0.00013240703,0.00008375567],"category_scores_gemma":[0.0003022926,0.00016817752,0.00009834005,0.00028013746,0.000060524697,0.0000017184115,0.00030773488,0.00019488951,0.0000018762333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032299304,0.00004471936,0.0016735742,0.000002985514,0.000017944587,0.000004453956,0.00003714829,0.0014286704,0.95065296,0.0011304222,0.000010882021,0.044963926],"study_design_scores_gemma":[0.0004547117,0.00032162416,0.0005099841,0.0000012896262,0.0000096673775,0.000006243162,0.000051169172,0.0003734031,0.92628753,0.010890223,0.06088615,0.00020799317],"about_ca_topic_score_codex":0.000019892197,"about_ca_topic_score_gemma":0.0000063142234,"teacher_disagreement_score":0.17529686,"about_ca_system_score_codex":0.000043144904,"about_ca_system_score_gemma":0.000054957964,"threshold_uncertainty_score":0.685808},"labels":[],"label_agreement":null},{"id":"W4308455789","doi":"10.1007/978-1-0716-2819-5_12","title":"Chromosome-Length Haplotypes with StrandPhaseR and Strand-seq","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"Canadian Institutes of Health Research","keywords":"Haplotype; Chromosome; Sequence (biology); DNA sequencing; Genetics; Genome; Biology; Sample (material); Computational biology; Computer science; DNA; Gene; Physics; Genotype","score_opus":0.014213349484638505,"score_gpt":0.31741238286882045,"score_spread":0.30319903338418197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308455789","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84657586,0.0018777254,0.1492861,0.00021447947,0.00010948441,0.00019942879,0.000076308956,0.00001509239,0.0016455483],"genre_scores_gemma":[0.80976135,0.00018980158,0.18889545,0.00060576963,0.000040801773,0.000036375888,0.00012310408,0.00001903975,0.00032829796],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986402,0.00047193142,0.0001462089,0.00041213413,0.00007148216,0.00025806567],"domain_scores_gemma":[0.9996409,0.00002617785,0.00005005911,0.00020064261,0.000019845287,0.00006239346],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005094164,0.00015124567,0.0001966025,0.00007820238,0.00013240476,0.00001302923,0.00017251549,0.000089865316,0.000098134005],"category_scores_gemma":[0.000034042376,0.00013363984,0.000042379575,0.00010264438,0.00012068754,0.0000013771814,0.00019083507,0.00015399256,7.462443e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020623852,0.00007776417,0.006811896,0.000013465051,0.000066447756,0.000040040693,0.0000757069,0.00033194732,0.98458964,0.0008914062,0.00009307842,0.006802357],"study_design_scores_gemma":[0.008896352,0.008256774,0.007833874,0.000034527588,0.00015983252,0.0006967294,0.002009488,0.00059948466,0.6690489,0.006388365,0.29434258,0.001733104],"about_ca_topic_score_codex":0.000034345965,"about_ca_topic_score_gemma":0.000012332249,"teacher_disagreement_score":0.31554076,"about_ca_system_score_codex":0.0000073168167,"about_ca_system_score_gemma":0.000041096435,"threshold_uncertainty_score":0.5449675},"labels":[],"label_agreement":null},{"id":"W4308583764","doi":"10.1007/978-1-0716-2609-2_20","title":"Optimizing Antibody–Antigen Binding Affinities with the ADAPT Platform","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Mutant; Binding affinities; Affinities; Affinity maturation; Robustness (evolution); Mutagenesis; Computational biology; Protein engineering; Antibody; Chemistry; Computer science; Biology; Genetics; Biochemistry; Receptor; Gene; Enzyme","score_opus":0.06338003356308367,"score_gpt":0.43364696489543036,"score_spread":0.37026693133234667,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308583764","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.685857,0.0034728954,0.28986835,0.007327394,0.00022969098,0.0006739018,0.000031531483,0.00005460309,0.012484617],"genre_scores_gemma":[0.1510463,0.0002590775,0.8442584,0.0021193551,0.000085364845,0.00016874337,0.0001430663,0.00004970508,0.001869938],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998062,0.000730958,0.00021160663,0.0003050338,0.00022495641,0.00046543192],"domain_scores_gemma":[0.9991332,0.00042465702,0.00006567363,0.00027445797,0.00003718153,0.00006477997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016003065,0.00016316252,0.00033602907,0.00024367619,0.0003055438,0.000014122744,0.00027933897,0.00006415633,0.00039967784],"category_scores_gemma":[0.00009083492,0.000099170364,0.00009862956,0.00044786528,0.00027271878,0.00002091808,0.00039318815,0.00068446284,0.000006098534],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009971268,0.00011338454,0.014033015,0.00004789507,0.00023282718,0.0008151851,0.0012489614,0.0004416411,0.9481219,0.015206543,0.00016285409,0.018578647],"study_design_scores_gemma":[0.005025177,0.0061560213,0.00803438,0.00015548914,0.00017750384,0.0028449502,0.012247446,0.0070511266,0.32233962,0.00538273,0.6293082,0.0012773176],"about_ca_topic_score_codex":0.0001781904,"about_ca_topic_score_gemma":0.000013712924,"teacher_disagreement_score":0.6291454,"about_ca_system_score_codex":0.00006071969,"about_ca_system_score_gemma":0.000122029385,"threshold_uncertainty_score":0.4376192},"labels":[],"label_agreement":null},{"id":"W4308750332","doi":"10.1007/978-1-0716-2803-4_7","title":"Activity-Based Protein Profiling (ABPP) for Cellular Deubiquitinase (DUB) and Inhibitor Profiling at Deep and High-Throughput Levels","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"Engineering and Physical Sciences Research Council","keywords":"Deubiquitinating enzyme; Profiling (computer programming); Computational biology; Chemistry; Molecular biology; Biology; Biochemistry; Computer science; Gene; Ubiquitin","score_opus":0.02947570289809189,"score_gpt":0.33949286662805384,"score_spread":0.31001716372996196,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4308750332","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.571098,0.0011466428,0.42603835,0.00014402624,0.00010146303,0.0012938109,0.00012528176,0.000018646435,0.000033724966],"genre_scores_gemma":[0.45535165,0.000008050697,0.5424086,0.0003324121,0.0000866586,0.0014096524,0.00028502103,0.00005334395,0.00006463493],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99625385,0.0016444818,0.0003706488,0.0010271053,0.00011440999,0.00058950507],"domain_scores_gemma":[0.9990616,0.00013105823,0.00019456497,0.00042366885,0.00006704389,0.00012210336],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019142117,0.000349965,0.00042611113,0.00015188077,0.0003490384,0.000025427016,0.00022095564,0.00030809132,0.000028406981],"category_scores_gemma":[0.00047552344,0.00037191602,0.0001105737,0.00017228488,0.00023426936,0.000005697877,0.00073902955,0.00032657443,9.010346e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042468257,0.00008315781,0.0007846784,0.00016513716,0.00003625408,0.000023029075,0.000042105705,0.000099296994,0.9872855,0.0017574792,0.000004036729,0.009294672],"study_design_scores_gemma":[0.0017125326,0.0011873214,0.000027060383,0.000013728727,0.000025235697,0.000029317509,0.00006479531,0.0016050184,0.98801744,0.0030109806,0.0038673575,0.00043918414],"about_ca_topic_score_codex":0.00002154016,"about_ca_topic_score_gemma":0.000009034124,"teacher_disagreement_score":0.116370216,"about_ca_system_score_codex":0.00007142682,"about_ca_system_score_gemma":0.00013025836,"threshold_uncertainty_score":0.9998733},"labels":[],"label_agreement":null},{"id":"W4309014062","doi":"10.1007/978-1-0716-2740-2_15","title":"Induction of Human T Cell Development In Vitro with OP9-DL4-7FS Cells Expressing Human Cytokines","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Sunnybrook Hospital","funders":"Canadian Institutes of Health Research","keywords":"Cell biology; Biology; Haematopoiesis; Stromal cell; Stem cell; Cancer research","score_opus":0.05628862039573744,"score_gpt":0.42594063827114825,"score_spread":0.3696520178754108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309014062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9638338,0.0002764344,0.033595376,0.000056278754,0.000086455526,0.0005004949,0.0000025445747,0.000018141482,0.0016304578],"genre_scores_gemma":[0.56596136,0.000005099926,0.43309432,0.00011397135,0.000028474433,0.00016589194,0.000053211406,0.000040065202,0.00053763494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99675786,0.0017420865,0.00046104423,0.00043636354,0.00022992601,0.00037273485],"domain_scores_gemma":[0.9992819,0.00009514542,0.00013714518,0.00037263395,0.00005662847,0.000056544264],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020134822,0.00017531574,0.00048468285,0.0006465828,0.000101926824,0.0000060331727,0.00020828795,0.00012151662,0.0005020556],"category_scores_gemma":[0.000037624945,0.00016183434,0.000058908,0.00055890455,0.00016719429,0.000017784016,0.00025285443,0.0006155169,7.343625e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003916964,0.00027345624,0.0019690932,0.00006487336,0.000028772361,0.00010523556,0.0009967632,0.00008357009,0.9807957,0.00005184935,0.000004843973,0.015234184],"study_design_scores_gemma":[0.0019964133,0.00058143685,0.00063718454,0.000027876702,0.000011664869,0.000026192574,0.0003567987,0.000025040355,0.99278426,0.00041697093,0.002981887,0.00015429352],"about_ca_topic_score_codex":0.00020833028,"about_ca_topic_score_gemma":0.000017185555,"teacher_disagreement_score":0.39949894,"about_ca_system_score_codex":0.0002692176,"about_ca_system_score_gemma":0.00014284461,"threshold_uncertainty_score":0.6599413},"labels":[],"label_agreement":null},{"id":"W4309048714","doi":"10.1007/978-1-0716-2744-0_21","title":"Using the Bleomycin-Induced Model of Fibrosis to Study the Contribution of CCN Proteins to Scleroderma Fibrosis","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connective Tissue Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Western University","funders":"Canadian Institutes of Health Research","keywords":"Bleomycin; Fibrosis; Medicine; Scleroderma (fungus); Inflammation; Lung fibrosis; Pulmonary fibrosis; Immunology; Pathology; Internal medicine; Chemotherapy","score_opus":0.09723106522065007,"score_gpt":0.4402338863990324,"score_spread":0.3430028211783823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309048714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.60359687,0.00012601943,0.39443976,0.00032928254,0.000039185466,0.0014184425,0.00003527041,0.0000029899472,0.000012200078],"genre_scores_gemma":[0.899107,0.000002136631,0.10015628,0.0002151198,0.000018044771,0.00045679597,0.000012691059,0.000022753047,0.000009175771],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947819,0.0037052934,0.0004212776,0.0004956673,0.00022033419,0.0003755243],"domain_scores_gemma":[0.99856406,0.00015265409,0.00014172349,0.00081317336,0.00026668745,0.000061684725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029107712,0.00018030406,0.00033160552,0.00016387276,0.0001801562,0.000008395834,0.0007407293,0.00009645687,0.000021074375],"category_scores_gemma":[0.001444721,0.0001329049,0.00012434486,0.00067371223,0.00010038278,0.0000021523776,0.0013291925,0.00024787954,4.333325e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000283516,0.00016485174,0.0026465324,0.0000055067135,0.00009775585,0.0000010740162,0.0004588167,0.00865498,0.984438,0.00028431328,0.0000065443933,0.002958117],"study_design_scores_gemma":[0.00054108305,0.001636854,0.0020473208,0.0000057823577,0.000029254774,0.000003101421,0.0005467558,0.0019623155,0.9923782,0.00052471674,0.000177932,0.0001467183],"about_ca_topic_score_codex":0.0003899473,"about_ca_topic_score_gemma":0.00006183837,"teacher_disagreement_score":0.29551014,"about_ca_system_score_codex":0.00006804514,"about_ca_system_score_gemma":0.00013512273,"threshold_uncertainty_score":0.54197043},"labels":[],"label_agreement":null},{"id":"W4309081222","doi":"10.1007/978-1-0716-2863-8_4","title":"pSILAC-Based Determination of Cellular Protein Sorting into Extracellular Vesicles","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Vesicle; Endocytosis; Cell biology; Extracellular vesicles; Extracellular; Sorting; Extracellular vesicle; Cytosol; Protein targeting; Function (biology); Intracellular; Transport protein; Biology; Chemistry; Cell; Membrane; Membrane protein; Biochemistry; Microvesicles; Computer science; Gene","score_opus":0.014554058535461597,"score_gpt":0.34521173676174327,"score_spread":0.33065767822628167,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309081222","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38324276,0.0032727441,0.6127303,0.00006173254,0.000109278015,0.00041000976,0.0000107134665,0.00001580368,0.00014666305],"genre_scores_gemma":[0.51609296,0.000003931537,0.48327827,0.000100379046,0.000032043234,0.00022333488,0.0001428682,0.000043043303,0.00008318861],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99504834,0.0027847388,0.0007550081,0.0007526385,0.00021183903,0.0004474502],"domain_scores_gemma":[0.9985236,0.000071200615,0.00041764218,0.0008077662,0.0000849507,0.00009487474],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025673765,0.0002865329,0.00036504024,0.00027250915,0.00014306014,0.00001072972,0.0006368438,0.0002254832,0.000086047374],"category_scores_gemma":[0.0007089769,0.0003359389,0.00023387065,0.00039051406,0.00026447568,0.000004576069,0.0004824154,0.0003187794,0.0000018632729],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013387251,0.0002503865,0.0018138476,0.000071162365,0.000020814881,0.000059223494,0.000059842176,0.0007728529,0.9719947,0.0013661007,0.00000581736,0.023451356],"study_design_scores_gemma":[0.0007805147,0.0004930935,0.000064141874,0.000013899913,0.00002613994,0.0000072970947,0.00011170851,0.003594749,0.9828206,0.008676597,0.003068928,0.00034236658],"about_ca_topic_score_codex":0.00003833732,"about_ca_topic_score_gemma":0.0000066849934,"teacher_disagreement_score":0.13285019,"about_ca_system_score_codex":0.00007017265,"about_ca_system_score_gemma":0.0001827967,"threshold_uncertainty_score":0.9999093},"labels":[],"label_agreement":null},{"id":"W4309082069","doi":"10.1007/978-1-0716-2744-0_2","title":"Optimal CCN4 Immunofluorescence for Tissue Microarray","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connective Tissue Growth Factor Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal; Queen's University","funders":"Canadian Institutes of Health Research; National Institutes of Health","keywords":"Immunofluorescence; Tissue microarray; Biology; Microarray; Microarray analysis techniques; Cell biology; Epithelial–mesenchymal transition; Cancer research; Mesenchymal stem cell; Computational biology; Gene expression; Gene; Antibody; Transition (genetics); Immunology; Immunohistochemistry; Genetics","score_opus":0.027235716180616962,"score_gpt":0.4223830674845351,"score_spread":0.3951473513039181,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309082069","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15308394,0.0034795576,0.8416243,0.00030124898,0.00035316194,0.000769495,0.000072828305,0.000016363558,0.00029910606],"genre_scores_gemma":[0.13372664,0.00003832956,0.8633268,0.0005162649,0.00012417122,0.0012146697,0.0003084116,0.000073406925,0.0006713061],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970722,0.0012362743,0.00028781296,0.00072746124,0.00010292324,0.0005733218],"domain_scores_gemma":[0.9990816,0.00012653138,0.00008005552,0.00056262244,0.00009143113,0.000057749963],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001735374,0.00020912976,0.0002701982,0.00019180041,0.00016096093,0.000015036055,0.00067240826,0.00015765283,0.00017611176],"category_scores_gemma":[0.0008606962,0.00023382618,0.00012823641,0.00027512206,0.00017439004,0.0000022907855,0.0007903801,0.0003033104,0.0000046792084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023140499,0.00007306707,0.00087383616,0.000013070228,0.000039364128,0.0000128358915,0.00003923301,0.00018128396,0.9798366,0.0010305129,0.00021420527,0.01745463],"study_design_scores_gemma":[0.00067994284,0.00078800455,0.00020246273,0.0000018568088,0.000006669455,0.000033143133,0.00007272377,0.000084022104,0.7981698,0.00086404587,0.19886103,0.00023632182],"about_ca_topic_score_codex":0.0000656073,"about_ca_topic_score_gemma":0.000009336383,"teacher_disagreement_score":0.19864683,"about_ca_system_score_codex":0.000077728146,"about_ca_system_score_gemma":0.00012436986,"threshold_uncertainty_score":0.9535155},"labels":[],"label_agreement":null},{"id":"W4309082206","doi":"10.1007/978-1-0716-2863-8_12","title":"Workflow for Quantitative Proteomic Analysis of Intestinal Organoids Using SILAC","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Stable isotope labeling by amino acids in cell culture; Organoid; Cell biology; Biology; Proteomics; Cell; Endogeny; Quantitative proteomics; Computational biology; Chemistry; Biochemistry","score_opus":0.04700484470205182,"score_gpt":0.4475884642715794,"score_spread":0.4005836195695276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309082206","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20901467,0.00008500673,0.79046965,0.000033768574,0.000010269112,0.00023280634,0.00005263997,0.000021692133,0.00007951223],"genre_scores_gemma":[0.036445364,0.0000030354722,0.9626537,0.000039887167,0.00000539664,0.0007566803,0.00005919129,0.000017813734,0.000018916582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989351,0.0002140649,0.00032474723,0.00030601694,0.000042466116,0.00017758852],"domain_scores_gemma":[0.99915737,0.00026389895,0.00021095824,0.0002892326,0.00005818559,0.000020350757],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006494677,0.00010698592,0.00033557377,0.00023357985,0.00007599187,0.000002857454,0.00025100328,0.00007182192,0.00014643744],"category_scores_gemma":[0.0003325955,0.000116789925,0.00014622438,0.0008756367,0.000075589334,0.000009747446,0.00017948794,0.0002105898,8.1432745e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004984882,0.000048489208,0.0018243924,0.000016326683,0.0001154012,0.0000010860236,0.000052559382,0.004992023,0.9757912,0.014846054,6.0139246e-7,0.0022619795],"study_design_scores_gemma":[0.00015272084,0.00006597711,0.000010345015,0.000005347173,0.00014677171,0.0000027061772,0.000079759906,0.046120137,0.9022111,0.050927244,0.00016000436,0.00011788023],"about_ca_topic_score_codex":0.000037122394,"about_ca_topic_score_gemma":0.0000020605535,"teacher_disagreement_score":0.1725693,"about_ca_system_score_codex":0.00010245257,"about_ca_system_score_gemma":0.000044505257,"threshold_uncertainty_score":0.4762555},"labels":[],"label_agreement":null},{"id":"W4309328745","doi":"10.1007/978-1-0716-2772-3","title":"Muscular Dystrophy Therapeutics","year":2022,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Muscular dystrophy; Medicine; Physical medicine and rehabilitation; Internal medicine","score_opus":0.019494282238225847,"score_gpt":0.3686663635725429,"score_spread":0.34917208133431704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309328745","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020450118,0.031271428,0.66391283,0.00030970311,0.0021527056,0.0014026085,0.0002280134,0.00008407643,0.29859364],"genre_scores_gemma":[0.0010199026,0.0047978503,0.64953744,0.01275864,0.0010442361,0.001029903,0.00943282,0.0006901875,0.31968904],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99567056,0.0019224001,0.00052894687,0.0011541551,0.00012719494,0.0005967503],"domain_scores_gemma":[0.9983617,0.000083153835,0.0002552955,0.0011617993,0.000056745946,0.00008128522],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000927821,0.0005728783,0.0006913604,0.00026011665,0.00010861054,0.00001079193,0.0008140392,0.0012718807,0.00050082715],"category_scores_gemma":[0.00012953344,0.0006030586,0.00046611988,0.00014113504,0.00040206788,0.0000014608871,0.0006930636,0.0009142868,0.000015574322],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026970147,0.00013296964,0.00009438681,0.00006774656,0.0005159877,0.00006413,0.00004030844,0.00022899488,0.9647651,0.010508333,0.002805093,0.020507302],"study_design_scores_gemma":[0.00078253984,0.0008365097,0.000035040084,0.0000126702,0.0000948917,0.000020531701,0.00002282588,0.000023586594,0.01758322,0.044377368,0.93545717,0.000753676],"about_ca_topic_score_codex":0.0000126466375,"about_ca_topic_score_gemma":0.000009806447,"teacher_disagreement_score":0.9471818,"about_ca_system_score_codex":0.00008550965,"about_ca_system_score_gemma":0.00042146363,"threshold_uncertainty_score":0.9996421},"labels":[],"label_agreement":null},{"id":"W4309329114","doi":"10.1007/978-1-0716-2772-3_6","title":"Restoring Dystrophin Expression by Skipping Exons 6 and 8 in Neonatal Dystrophic Dogs","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; Duchenne muscular dystrophy; Dystrophin; Exon; Medicine; Muscular dystrophy; RNA splicing; Bioinformatics; Pathology; Biology; Genetics; Alternative splicing; Internal medicine; Gene; RNA","score_opus":0.012050811665295197,"score_gpt":0.33817579797338304,"score_spread":0.32612498630808784,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8797055,0.0050507467,0.114560306,0.00013465098,0.00019164116,0.0001816066,0.000017058102,0.000010559539,0.00014796856],"genre_scores_gemma":[0.92116094,0.00015493348,0.07789568,0.00033810813,0.000033964567,0.00018496883,0.0001488265,0.000026952315,0.000055606368],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99707407,0.0015535261,0.00028824466,0.0006302927,0.00006791185,0.0003859653],"domain_scores_gemma":[0.9994383,0.000056501056,0.00008392897,0.00034994245,0.0000123612945,0.000058980488],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084241846,0.000192112,0.0002534557,0.00015600862,0.00012627828,0.0000065427453,0.00026021723,0.00019775037,0.000032752374],"category_scores_gemma":[0.00021910727,0.00020704189,0.000058266818,0.00018515461,0.0001559376,0.0000036865529,0.000606541,0.0003874295,4.4410643e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021254312,0.000040556926,0.0054422505,0.000009788734,0.000011256607,0.000024876279,0.00007631614,0.0003739328,0.988389,0.00020355817,0.000060397262,0.0051555345],"study_design_scores_gemma":[0.003916469,0.0013274984,0.0059248647,0.000037138947,0.000018771705,0.00012274491,0.0006799346,0.0006376023,0.939752,0.0096026,0.036942147,0.0010382405],"about_ca_topic_score_codex":0.00009186572,"about_ca_topic_score_gemma":0.000021324331,"teacher_disagreement_score":0.048637003,"about_ca_system_score_codex":0.00003353104,"about_ca_system_score_gemma":0.000040772644,"threshold_uncertainty_score":0.84429234},"labels":[],"label_agreement":null},{"id":"W4309329129","doi":"10.1007/978-1-0716-2772-3_26","title":"Identifying FDA-Approved Drugs that Upregulate Utrophin A as a Therapeutic Strategy for Duchenne Muscular Dystrophy","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Utrophin; Duchenne muscular dystrophy; Dystrophin; Sarcolemma; Downregulation and upregulation; Medicine; Muscular dystrophy; Skeletal muscle; ITGA7; mdx mouse; Bioinformatics; Pharmacology; Cancer research; Cell biology; Internal medicine; Biology; Genetics; Gene","score_opus":0.03607414062907274,"score_gpt":0.3876102414317458,"score_spread":0.35153610080267306,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329129","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46030107,0.0036797877,0.53414524,0.00025818677,0.00039280448,0.0008102421,0.00003756544,0.000030714367,0.00034439238],"genre_scores_gemma":[0.8675228,0.00010004889,0.12880881,0.001565939,0.000084177125,0.001142179,0.000428904,0.000081620376,0.0002655222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99566,0.0020746486,0.00041368895,0.0010286705,0.00012013561,0.0007028202],"domain_scores_gemma":[0.9987946,0.000097217024,0.00020153556,0.0007517785,0.00006216986,0.0000927016],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014001537,0.00037456764,0.00047310547,0.00018667952,0.00027319285,0.000025044987,0.00063534256,0.00032342327,0.000105565596],"category_scores_gemma":[0.00016228849,0.0003879889,0.000389991,0.00026221471,0.00024235102,0.000006197587,0.00047461686,0.00037169282,0.0000032590217],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006745358,0.00015133695,0.0001678452,0.000036697587,0.00021575119,0.000011289206,0.00012677952,0.0018517212,0.97669476,0.0063872975,0.00004523642,0.013636757],"study_design_scores_gemma":[0.0064059165,0.0037521413,0.0011939076,0.000016002856,0.00019063443,0.00008335255,0.001959693,0.001984082,0.70373607,0.23545617,0.04372091,0.0015011398],"about_ca_topic_score_codex":0.00010681486,"about_ca_topic_score_gemma":0.000010186782,"teacher_disagreement_score":0.4072217,"about_ca_system_score_codex":0.000047282723,"about_ca_system_score_gemma":0.00013892892,"threshold_uncertainty_score":0.9998572},"labels":[],"label_agreement":null},{"id":"W4309329317","doi":"10.1007/978-1-0716-2772-3_3","title":"Rapid Freezing of Skeletal and Cardiac Muscles Using Isopentane Cooled with Liquid Nitrogen and Tragacanth Gum for Histological, Genetic, and Protein Expression Studies","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Isopentane; Skeletal muscle; Tragacanth; Liquid nitrogen; Biology; Cardiac muscle; Biochemistry; Chemistry; Anatomy; Food science","score_opus":0.03012158651562385,"score_gpt":0.35175493116346257,"score_spread":0.3216333446478387,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8902757,0.040877625,0.068155326,0.0000465595,0.000039342347,0.0005612019,0.00003063566,0.000004571797,0.000009011808],"genre_scores_gemma":[0.6383878,0.0007587836,0.36044046,0.0000996817,0.000018272118,0.00023918664,0.000033084696,0.000018930925,0.000003806443],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99810654,0.0008690834,0.0002413538,0.00050100195,0.000047236033,0.00023479093],"domain_scores_gemma":[0.99951303,0.00007818753,0.00013579229,0.00018344785,0.000045411944,0.00004412559],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000569307,0.00018451225,0.000423684,0.000072653085,0.00015326322,0.0000037838204,0.000099787205,0.00014422934,0.000004782705],"category_scores_gemma":[0.00017444107,0.00015499114,0.00005187659,0.000067274326,0.00055817823,0.0000028456607,0.0003661549,0.000121894554,9.364388e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00083860906,0.00004020192,0.0012293949,0.00007361005,0.00011707274,0.000004372287,0.00009581495,0.000039280185,0.9926708,0.00015669536,0.000007901732,0.0047262823],"study_design_scores_gemma":[0.0018500122,0.0046252417,0.00062872795,0.00003004942,0.0000983357,0.000039201455,0.0012571387,0.00017330443,0.9861978,0.002990456,0.0017407676,0.0003689592],"about_ca_topic_score_codex":0.000024699759,"about_ca_topic_score_gemma":0.0000053883687,"teacher_disagreement_score":0.2922851,"about_ca_system_score_codex":0.000010153025,"about_ca_system_score_gemma":0.00003704771,"threshold_uncertainty_score":0.6320355},"labels":[],"label_agreement":null},{"id":"W4309329466","doi":"10.1007/978-1-0716-2772-3_12","title":"Knocking Down DUX4 in Immortalized Facioscapulohumeral Muscular Dystrophy Patient-Derived Muscle Cells","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Facioscapulohumeral muscular dystrophy; Muscular dystrophy; Skeletal muscle; Gene knockdown; Biology; Transcription factor; Cell biology; Gene; Genetics; Endocrinology","score_opus":0.00974423670822652,"score_gpt":0.32167680301082585,"score_spread":0.31193256630259936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329466","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91473556,0.0015250426,0.08218822,0.0000882783,0.00050274795,0.0004591291,0.000040322106,0.000021439677,0.00043928737],"genre_scores_gemma":[0.9010646,0.00008289931,0.096951805,0.0010898709,0.0000381943,0.00038148294,0.00031743,0.000050890627,0.000022878101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947309,0.0029717998,0.0005605536,0.000927671,0.000119994475,0.000689121],"domain_scores_gemma":[0.9990092,0.00005159157,0.00017648695,0.0006430695,0.00003406458,0.000085589425],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008008095,0.00034557542,0.00047631247,0.0002686957,0.00015904196,0.000010714091,0.00047885184,0.0002989488,0.0002409812],"category_scores_gemma":[0.00016542267,0.00037657266,0.00025670367,0.0003923931,0.00020422923,0.000004971829,0.0006968344,0.00047596404,0.0000046482523],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022970283,0.00019043667,0.0012856686,0.000012666945,0.000051635605,0.000056214027,0.00016734058,0.0029116264,0.9856785,0.0002553558,0.000038777205,0.009122107],"study_design_scores_gemma":[0.0035384002,0.0013800072,0.0038649256,0.0000102725235,0.000030953393,0.00001956296,0.00075850164,0.00046524423,0.95664954,0.0044169426,0.027921636,0.00094399985],"about_ca_topic_score_codex":0.00021090396,"about_ca_topic_score_gemma":0.00004652275,"teacher_disagreement_score":0.029028915,"about_ca_system_score_codex":0.000054322714,"about_ca_system_score_gemma":0.0000868773,"threshold_uncertainty_score":0.99986863},"labels":[],"label_agreement":null},{"id":"W4309329498","doi":"10.1007/978-1-0716-2772-3_1","title":"Current Strategies of Muscular Dystrophy Therapeutics: An Overview","year":2022,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Muscular dystrophy; Disease; Medicine; Nonsense; Muscle disorder; Genetic enhancement; Bioinformatics; Neuroscience; Pathology; Gene; Biology; Genetics; Internal medicine","score_opus":0.1317676750386303,"score_gpt":0.507123063543477,"score_spread":0.37535538850484673,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329498","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00007858391,0.9394086,0.05912603,0.000003687177,0.0004525106,0.000570704,0.00007407238,0.000013143306,0.00027265263],"genre_scores_gemma":[0.000011795809,0.95545006,0.042771064,0.00007439285,0.000077615645,0.0003207616,0.0012114668,0.00007679613,0.0000060380717],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.991714,0.0058315727,0.00086951646,0.0010026285,0.000108286375,0.0004739704],"domain_scores_gemma":[0.99809366,0.000109569315,0.0004906293,0.0011894088,0.000043284515,0.000073436466],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011616958,0.0005927987,0.0016813854,0.00027864162,0.00006282233,0.0000117633845,0.00093646167,0.0007026892,0.00015883535],"category_scores_gemma":[0.00010690355,0.0005297626,0.0007927141,0.0003704495,0.00034209315,0.000004482134,0.000476874,0.00063986046,0.0000024451613],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000032860393,0.00023424992,0.0000053595345,0.003027265,0.0003042817,0.0000065322142,0.00002050787,0.000033601278,0.01915437,0.006147702,0.000005691601,0.97102755],"study_design_scores_gemma":[0.00029168278,0.00077069754,0.0000042387287,0.00028924036,0.00030736512,0.000012929029,0.00006107582,0.0000068818154,0.0005899858,0.0053306585,0.9918515,0.0004837191],"about_ca_topic_score_codex":0.00002650095,"about_ca_topic_score_gemma":0.000008653781,"teacher_disagreement_score":0.99184585,"about_ca_system_score_codex":0.000031990916,"about_ca_system_score_gemma":0.00048844895,"threshold_uncertainty_score":0.9997154},"labels":[],"label_agreement":null},{"id":"W4309329614","doi":"10.1007/978-1-0716-2772-3_29","title":"Quantification of Muscle Satellite Stem Cell Divisions by High-Content Analysis","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"National Institute of Arthritis and Musculoskeletal and Skin Diseases; Canadian Institutes of Health Research","keywords":"High-content screening; Biology; Stem cell; Sarcolemma; MYF5; Myocyte; Computational biology; Cell biology; Myogenesis; Cell; Genetics; MyoD","score_opus":0.05862109126472211,"score_gpt":0.38467019545591485,"score_spread":0.32604910419119276,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329614","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19032048,0.0015534635,0.80749565,0.00006907886,0.00014015652,0.00011084995,0.000030520034,0.000037271162,0.00024252209],"genre_scores_gemma":[0.73783135,0.00012789546,0.26179922,0.000023245462,0.000003857418,0.00006108655,0.00006823124,0.000016422096,0.00006868298],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975398,0.001377669,0.00039273666,0.00026114107,0.00016710773,0.00026154565],"domain_scores_gemma":[0.99899656,0.0004503727,0.000056774767,0.00040891263,0.0000315885,0.000055795717],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024071643,0.00009663838,0.00028436515,0.00042984262,0.000038273713,0.0000055311402,0.00036679461,0.00008473375,0.00014830694],"category_scores_gemma":[0.00012529884,0.0000981179,0.000109300534,0.0013080476,0.0000854389,0.0000095987725,0.00022249157,0.00031153724,0.0000036109755],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000030746173,0.000043902997,0.0014593867,0.000019435616,0.000078675715,0.0000027112526,0.000055179982,0.005849474,0.9008129,0.0006801641,0.000019088126,0.09097598],"study_design_scores_gemma":[0.00028187747,0.00010512342,0.008898175,0.0000042806414,0.000076017895,5.812077e-7,0.00016810397,0.03201465,0.94460607,0.001134206,0.012501693,0.00020923332],"about_ca_topic_score_codex":0.00014972765,"about_ca_topic_score_gemma":0.000004019947,"teacher_disagreement_score":0.54751086,"about_ca_system_score_codex":0.000077567856,"about_ca_system_score_gemma":0.000012354255,"threshold_uncertainty_score":0.4001132},"labels":[],"label_agreement":null},{"id":"W4309329712","doi":"10.1007/978-1-0716-2772-3_2","title":"Viltolarsen: From Preclinical Studies to FDA Approval","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Medicine; Clinical trial; Exon skipping; Duchenne muscular dystrophy; Food and drug administration; Dystrophin; Clinical research; Population; Muscular dystrophy; Exon; Bioinformatics; Oncology; Pharmacology; Internal medicine; Gene; Genetics; Biology","score_opus":0.05641774302297121,"score_gpt":0.4699593189552221,"score_spread":0.4135415759322509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329712","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6883235,0.0061741853,0.30237964,0.0008405264,0.0009657421,0.00044718815,0.000058820053,0.000026858486,0.00078354514],"genre_scores_gemma":[0.33266345,0.00016326892,0.65732974,0.008390699,0.0002003677,0.0006537909,0.000346618,0.000051918752,0.0002001403],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9957639,0.0025619029,0.00038249439,0.00082162995,0.00007896014,0.0003911272],"domain_scores_gemma":[0.9990248,0.00018169229,0.00008497341,0.00058364717,0.00004141675,0.00008348241],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012227679,0.00021616957,0.00039384014,0.000102406644,0.00012668122,0.0000049464866,0.00046906926,0.00020095595,0.000102550744],"category_scores_gemma":[0.0011035291,0.00022015357,0.0001544757,0.00022845274,0.00018158097,0.0000015241117,0.0011047251,0.00033557683,0.000009126319],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004116606,0.000132996,0.002239312,0.0000053166773,0.00015540546,0.000013117233,0.00013012404,0.0007192932,0.9826115,0.00087440293,0.00059571036,0.01211118],"study_design_scores_gemma":[0.0034636275,0.0044065528,0.0042752195,0.000014085592,0.00009486873,0.0000306985,0.0021830252,0.00026596643,0.61571026,0.07464059,0.29347676,0.0014383548],"about_ca_topic_score_codex":0.000049428785,"about_ca_topic_score_gemma":0.00003135449,"teacher_disagreement_score":0.36690122,"about_ca_system_score_codex":0.000027228292,"about_ca_system_score_gemma":0.00007106514,"threshold_uncertainty_score":0.8977602},"labels":[],"label_agreement":null},{"id":"W4309329714","doi":"10.1007/978-1-0716-2772-3_7","title":"Restoring Dystrophin Expression with Exon 44 and 53 Skipping in the DMD Gene in Immortalized Myotubes","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Muscular Dystrophy Canada","funders":"Canadian Institutes of Health Research","keywords":"Exon skipping; Duchenne muscular dystrophy; Exon; Myogenesis; Dystrophin; Morpholino; Molecular biology; Biology; Cancer research; Medicine; Bioinformatics; Gene; Genetics; Gene knockdown; Alternative splicing","score_opus":0.015722018599483776,"score_gpt":0.3488240066740757,"score_spread":0.3331019880745919,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309329714","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96695894,0.002505571,0.02981404,0.00013224759,0.000086086,0.00027665403,0.000003750018,0.000005582343,0.000217141],"genre_scores_gemma":[0.91535443,0.00017147727,0.08360222,0.0004852402,0.000026746795,0.00026836392,0.000060004415,0.000018807259,0.000012723822],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962432,0.0025483775,0.00027071655,0.00052731525,0.00007660844,0.00033378243],"domain_scores_gemma":[0.9994135,0.00008152658,0.0000753434,0.00039241268,0.000010193789,0.000027036695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015133232,0.00017925899,0.0002531908,0.00016013844,0.00009420423,0.0000074106506,0.00029396484,0.00015043968,0.0000121286175],"category_scores_gemma":[0.0001632084,0.00013997918,0.000042792548,0.00025995084,0.00014621603,0.0000034043037,0.00030555905,0.0003428048,1.5735799e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036632846,0.00007085584,0.019037358,0.000009959306,0.000011464469,0.000052391282,0.00027245376,0.0009712969,0.97666353,0.00023813454,0.000006298898,0.0022999349],"study_design_scores_gemma":[0.005556064,0.002049316,0.058265395,0.000056610857,0.000024741888,0.0001452026,0.0032308153,0.00040070424,0.917172,0.0076358397,0.004621617,0.0008416729],"about_ca_topic_score_codex":0.00020264977,"about_ca_topic_score_gemma":0.00011931301,"teacher_disagreement_score":0.059491504,"about_ca_system_score_codex":0.000021877284,"about_ca_system_score_gemma":0.000044134045,"threshold_uncertainty_score":0.5708185},"labels":[],"label_agreement":null},{"id":"W4309330402","doi":"10.1007/978-1-0716-2772-3_11","title":"Morpholino-Mediated Exons 28–29 Skipping of Dysferlin and Characterization of Multiexon-skipped Dysferlin using RT-PCR, Immunoblotting, and Membrane Wounding Assay","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Dysferlin; Morpholino; Limb-girdle muscular dystrophy; Exon; Myopathy; Muscular dystrophy; Exon skipping; Molecular biology; Biology; Phenotype; Genetics; Cell biology; Gene; Alternative splicing; Gene knockdown","score_opus":0.018509372501688135,"score_gpt":0.3349659116414916,"score_spread":0.3164565391398034,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309330402","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8449067,0.0011200988,0.15340635,0.00003932567,0.00015509305,0.0002689214,0.00005229895,0.000008335811,0.000042872594],"genre_scores_gemma":[0.9149461,0.00031300625,0.0840794,0.0001461933,0.000022896647,0.00004169521,0.0004061572,0.000031579515,0.000012974993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996501,0.001982024,0.00058201933,0.0005279036,0.00008222143,0.00032480722],"domain_scores_gemma":[0.99904364,0.00016655528,0.00034358722,0.00032553324,0.000067037916,0.000053646218],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015035627,0.00023196083,0.00049615605,0.00024764283,0.00012890047,0.000005972039,0.00019990354,0.00027800843,0.00003026487],"category_scores_gemma":[0.00056106737,0.0002555056,0.00008437233,0.0002667586,0.0003359798,0.000006675428,0.00045878405,0.00027333756,1.2428549e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025131856,0.00009418519,0.005327332,0.00007145674,0.00008847828,0.000004518959,0.00017608672,0.00020348701,0.98973393,0.00025443273,5.2643736e-7,0.0037942587],"study_design_scores_gemma":[0.0017311734,0.00043213487,0.0049487907,0.00003011072,0.000049920804,0.000038416372,0.0003123634,0.006111904,0.9852331,0.00043242692,0.0003508854,0.00032874953],"about_ca_topic_score_codex":0.00010354047,"about_ca_topic_score_gemma":0.0000069551693,"teacher_disagreement_score":0.0700394,"about_ca_system_score_codex":0.000019248424,"about_ca_system_score_gemma":0.000074925,"threshold_uncertainty_score":0.9999897},"labels":[],"label_agreement":null},{"id":"W4309491788","doi":"10.1007/978-1-0716-2655-9_4","title":"Microglia in Human Postmortem Brain Samples: Quantitative Ultrastructural Analysis of Scanning Electron Microscopy Images","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of British Columbia; Université Laval; University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Ultrastructure; Microglia; Pathology; Organelle; Cytoplasm; Electron microscope; Fixation (population genetics); Human brain; Microscopy; Biology; Chemistry; Cell biology; Medicine; Inflammation; Neuroscience; Biochemistry; Immunology","score_opus":0.040671684874750494,"score_gpt":0.42979036699971696,"score_spread":0.3891186821249665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309491788","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78947014,0.000048541788,0.20982403,0.0002081143,0.00011391596,0.00020504532,0.000055579567,0.00002235225,0.000052308136],"genre_scores_gemma":[0.7112198,0.000006959229,0.28707927,0.0015003647,0.000005540943,0.000052046027,0.000053241325,0.000023831784,0.000058948346],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99310935,0.0051932316,0.0005886801,0.0006315779,0.00013832269,0.00033884257],"domain_scores_gemma":[0.9987569,0.0006204108,0.00027391745,0.00028478677,0.000027949221,0.00003606544],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011729326,0.00017996156,0.00045387575,0.0011773825,0.00013726983,0.000017785404,0.00036652124,0.00005519012,0.00015306147],"category_scores_gemma":[0.00091190217,0.00019608194,0.00014140557,0.0020744128,0.00013869864,0.00004672313,0.00014083747,0.0003647146,6.030716e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004368812,0.000035471017,0.0013459543,0.000004825703,0.000017906299,0.000029971972,0.0003514351,0.003536084,0.9753195,0.01907719,0.000007934357,0.00023000549],"study_design_scores_gemma":[0.000367672,0.00029702962,0.0016352423,0.0000022421762,0.000030186391,0.00001350624,0.00011979042,0.001531471,0.9930864,0.002670409,0.000085338754,0.0001607427],"about_ca_topic_score_codex":0.000071402086,"about_ca_topic_score_gemma":0.00003147939,"teacher_disagreement_score":0.07825033,"about_ca_system_score_codex":0.000071072245,"about_ca_system_score_gemma":0.000045365396,"threshold_uncertainty_score":0.79959893},"labels":[],"label_agreement":null},{"id":"W4310082297","doi":"10.1007/978-1-0716-2847-8_4","title":"The ChIP-Exo Method to Identify Genomic Locations of DNA-Binding Proteins at Near Single Base-Pair Resolution","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chromatin immunoprecipitation; ChIP-sequencing; Base pair; Computational biology; DNA; Genome; ChIP-on-chip; DNA binding site; Biology; Chromatin; Genetics; Gene; Nucleosome; Gene expression","score_opus":0.019376528688276676,"score_gpt":0.35390770665061433,"score_spread":0.33453117796233767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310082297","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5067436,0.00039985022,0.49179414,0.00032240708,0.0001594596,0.0003943906,0.000042332747,0.0000073231186,0.00013651942],"genre_scores_gemma":[0.15449448,0.000018829984,0.84437454,0.00024368482,0.00003698901,0.00029700669,0.00019747244,0.000043617492,0.00029338818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964053,0.002104661,0.0004779963,0.00051495805,0.00010481706,0.00039224303],"domain_scores_gemma":[0.9988617,0.00010793911,0.00021808383,0.0006870839,0.000059232792,0.00006598976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028327196,0.00018302008,0.00024043107,0.00011084256,0.00044993524,0.000020971653,0.0005602839,0.00014641207,0.000023774466],"category_scores_gemma":[0.00033420842,0.0001752059,0.00014628837,0.00029910356,0.00013898413,0.0000016800955,0.0010306418,0.00019152775,0.0000041092417],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006156227,0.000067023655,0.000611941,0.00001050694,0.000047325866,0.0000023463845,0.00010064319,0.0056153587,0.9879516,0.00095454854,0.0000769732,0.004500189],"study_design_scores_gemma":[0.00041113386,0.0006252297,0.001314744,0.0000064229703,0.000027028018,0.000038805018,0.00021358856,0.0045105955,0.95020145,0.0019945372,0.040377565,0.000278896],"about_ca_topic_score_codex":0.000070158756,"about_ca_topic_score_gemma":0.000088442815,"teacher_disagreement_score":0.3525804,"about_ca_system_score_codex":0.00019198046,"about_ca_system_score_gemma":0.00011766794,"threshold_uncertainty_score":0.71446896},"labels":[],"label_agreement":null},{"id":"W4310425710","doi":"10.1007/978-1-0716-2883-6_4","title":"Genotyping of Transposable Element Insertions Segregating in Human Populations Using Short-Read Realignments","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University; McGill Genome Centre","funders":"","keywords":"Transposable element; Genotyping; Biology; Human genome; Genome; Genetics; Computational biology; Structural variation; DNA Transposable Elements; Genotype; Gene","score_opus":0.09748639879954066,"score_gpt":0.40333255398905743,"score_spread":0.30584615518951674,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310425710","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9818521,0.0000951089,0.017309636,0.00018196397,0.000068815054,0.00022943718,0.00004793675,0.000010004717,0.00020498852],"genre_scores_gemma":[0.80400825,0.0000025582733,0.19572647,0.00006308406,0.000012922166,0.000051661315,0.00012362425,0.000001137706,0.0000103121965],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9982105,0.0008675885,0.00039848598,0.00023217712,0.000078488316,0.00021276053],"domain_scores_gemma":[0.99974275,0.00007392358,0.0000748896,0.00006381018,0.000019202454,0.0000254441],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068511843,0.000086055195,0.00017661627,0.000051910603,0.0002113969,0.000005276734,0.00016414495,0.00005277908,0.00028986204],"category_scores_gemma":[0.000041196443,0.00005064612,0.000060501563,0.00057996955,0.000030627532,0.000018070623,0.00010309736,0.00012710015,1.5317417e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000036820584,0.000089855734,0.08962976,0.0000022598695,0.000005992804,0.0000021550793,0.00012187948,0.005209767,0.89330924,0.0033671863,2.5596677e-7,0.008257994],"study_design_scores_gemma":[0.00128125,0.0012539463,0.48919666,0.0000976279,0.00010267183,0.00003389117,0.002453409,0.030438634,0.31675395,0.15396476,0.00334148,0.0010817067],"about_ca_topic_score_codex":0.001531761,"about_ca_topic_score_gemma":0.001357286,"teacher_disagreement_score":0.57655525,"about_ca_system_score_codex":0.000078408724,"about_ca_system_score_gemma":0.000011011004,"threshold_uncertainty_score":0.3173786},"labels":[],"label_agreement":null},{"id":"W4310425767","doi":"10.1007/978-1-0716-2883-6_2","title":"Assembly-Free Detection and Quantification of Transposable Elements with dnaPipeTE","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Transposable element; Comparability; Genome; Computational biology; Computer science; Genomics; Biology; Evolutionary biology; Genetics; Mathematics; Gene","score_opus":0.02416651599251346,"score_gpt":0.31174398621228283,"score_spread":0.28757747021976937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310425767","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93619925,0.00015903187,0.06291624,0.00033700824,0.000048137754,0.00015873322,0.00003114521,0.000009815115,0.00014061898],"genre_scores_gemma":[0.88227046,0.000011582964,0.11755479,0.000048653535,0.000008015183,0.00005755946,0.000029005607,6.5708963e-7,0.000019287654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99898005,0.00051654095,0.00015715335,0.00018569997,0.00005491301,0.000105663785],"domain_scores_gemma":[0.9997411,0.00009378274,0.00006809133,0.00005904727,0.000020186184,0.000017827153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005071164,0.000056581823,0.00010433381,0.000018104944,0.00008619014,0.000004366193,0.00012377709,0.000034327284,0.0000848489],"category_scores_gemma":[0.000040536892,0.00002590416,0.000021848293,0.0002834325,0.00003559626,0.000012441058,0.00005560767,0.000069613176,2.0409152e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023518918,0.000035004978,0.008720424,0.000002188303,0.0000071243517,7.310793e-7,0.000028181923,0.00003826078,0.9217304,0.00085410144,3.8624063e-7,0.068559684],"study_design_scores_gemma":[0.00058452337,0.0015062186,0.08535053,0.0000050944514,0.000027411792,0.0000210581,0.00024866872,0.0016180807,0.8867101,0.017010543,0.006724029,0.00019372505],"about_ca_topic_score_codex":0.000097110365,"about_ca_topic_score_gemma":0.00038019902,"teacher_disagreement_score":0.07663011,"about_ca_system_score_codex":0.000011019747,"about_ca_system_score_gemma":0.000004502617,"threshold_uncertainty_score":0.1056341},"labels":[],"label_agreement":null},{"id":"W4310710653","doi":"10.1007/978-1-0716-2883-6_5","title":"A Pangenome Approach to Detect and Genotype TE Insertion Polymorphisms","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill Genome Centre; McGill University","funders":"","keywords":"Genotype; Genetics; Biology; Gene","score_opus":0.021694418546229235,"score_gpt":0.3172018934463913,"score_spread":0.2955074749001621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4310710653","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21682245,0.0032506438,0.77862,0.00014887314,0.00014472328,0.000410069,0.000014328102,0.0000141629625,0.0005747444],"genre_scores_gemma":[0.2798505,0.00005285448,0.7178582,0.0015294957,0.00004995909,0.00044272223,0.00004919814,0.00003632623,0.00013075247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971646,0.0015493933,0.00024057247,0.0006188265,0.00008191114,0.00034467713],"domain_scores_gemma":[0.99937993,0.000027284987,0.00006847194,0.0004108193,0.000021353555,0.0000921115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013378751,0.00019168746,0.00024157482,0.00017447842,0.00012217383,0.000011715105,0.0002897246,0.00016849821,0.000031288495],"category_scores_gemma":[0.00018650597,0.0001969029,0.00007264598,0.00024770724,0.00005586884,0.0000015979367,0.0005113511,0.00014893491,0.0000028337568],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011702973,0.000025335179,0.00020449904,0.000005751151,0.000026714792,0.0000052345986,0.00006650684,0.000073472336,0.91806287,0.0009273498,0.000012256739,0.080472976],"study_design_scores_gemma":[0.0003660986,0.0007998798,0.00056275836,0.0000023278376,0.000015393318,0.000072727074,0.00008502679,0.00004251942,0.9591521,0.006594138,0.031984936,0.00032206674],"about_ca_topic_score_codex":0.00007376218,"about_ca_topic_score_gemma":0.000007801424,"teacher_disagreement_score":0.08015091,"about_ca_system_score_codex":0.00003150754,"about_ca_system_score_gemma":0.000042411837,"threshold_uncertainty_score":0.8029467},"labels":[],"label_agreement":null},{"id":"W4311095648","doi":"10.1007/978-1-0716-2651-1_1","title":"Introduction and Discovery of Retinitis Pigmentosa","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hereditary Neurological Disorders","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"National Eye Institute","keywords":"Retinitis pigmentosa; Blindness; Ophthalmology; Medicine; Optometry; Retinal","score_opus":0.0313858405278177,"score_gpt":0.36511959283380174,"score_spread":0.33373375230598407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311095648","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7225129,0.00018611121,0.2725175,0.0030909467,0.000543022,0.00021027838,0.000024135908,0.000023241852,0.00089189166],"genre_scores_gemma":[0.875251,0.000098963814,0.12227554,0.0021377446,0.000049351263,0.00008461366,0.000008228834,0.000015976088,0.000078604644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99563986,0.0034994911,0.00020333582,0.00041072755,0.00007351157,0.00017307726],"domain_scores_gemma":[0.9993574,0.00036623786,0.00006597906,0.00018622067,0.0000049795085,0.000019206833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068822,0.000078057245,0.00016704555,0.00011095898,0.0000472931,0.000004550371,0.00015941839,0.000042312724,0.00015655739],"category_scores_gemma":[0.0020245917,0.00007540488,0.00003236705,0.0003026105,0.00023468082,0.000034196895,0.00030633356,0.00023420337,7.145045e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038259503,0.000047322592,0.0006738118,0.00000454386,0.0000014533668,0.000027769442,0.000038127342,0.00006325022,0.9784323,0.014970272,0.000027535596,0.0056753717],"study_design_scores_gemma":[0.00040387764,0.0008677271,0.0011131789,0.0000010855638,0.000006095251,0.00007549255,0.000083482206,0.00036004835,0.9300229,0.054623708,0.012296407,0.00014599912],"about_ca_topic_score_codex":0.000014997978,"about_ca_topic_score_gemma":8.014559e-7,"teacher_disagreement_score":0.15273811,"about_ca_system_score_codex":0.000013529677,"about_ca_system_score_gemma":0.0000114465265,"threshold_uncertainty_score":0.3074922},"labels":[],"label_agreement":null},{"id":"W4311327061","doi":"10.1007/978-1-0716-2811-9_10","title":"Optical Tissue Clearing Enables Three-Dimensional Morphometry in Experimental Nerve Regeneration Research","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mental Health Research Canada","funders":"","keywords":"Computer science; Segmentation; Clearing; Regeneration (biology); Key (lock); Biomedical engineering; Artificial intelligence; Computer vision; Neuroscience; Biology; Engineering; Cell biology","score_opus":0.05597309689180675,"score_gpt":0.4376954255716668,"score_spread":0.38172232867986006,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311327061","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78229976,0.0029364421,0.21322963,0.00022756647,0.00042193965,0.00028461847,0.000007217528,0.00000817627,0.00058462616],"genre_scores_gemma":[0.7663317,0.000017602673,0.23263039,0.00018310857,0.00009117401,0.0002464274,0.00022539595,0.000035595745,0.0002386194],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99688816,0.0015775231,0.00033335417,0.00059907365,0.00017528217,0.00042658264],"domain_scores_gemma":[0.999378,0.000075443204,0.000049811068,0.00038122686,0.000054703734,0.000060809376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025098186,0.00014813239,0.0001989153,0.00037850425,0.00017045568,0.000019165913,0.00027893778,0.00017928304,0.00024449523],"category_scores_gemma":[0.0002895615,0.00016498248,0.0000736644,0.0004511568,0.000087223336,0.000004239372,0.00081858964,0.0005540954,0.0000048493616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008666066,0.00019771342,0.00025297684,0.0000029826465,0.000014939438,0.000055880188,0.000024397372,0.0018266841,0.9878987,0.0059779994,0.00009716826,0.0035638618],"study_design_scores_gemma":[0.00043420203,0.00063359615,0.000064853826,0.0000045104894,0.0000026957043,0.00006260575,0.00016287493,0.0038013018,0.9802719,0.0020041186,0.012382552,0.00017481895],"about_ca_topic_score_codex":0.00025366046,"about_ca_topic_score_gemma":0.00010772136,"teacher_disagreement_score":0.019400755,"about_ca_system_score_codex":0.00013025381,"about_ca_system_score_gemma":0.00008205703,"threshold_uncertainty_score":0.672779},"labels":[],"label_agreement":null},{"id":"W4311344996","doi":"10.1007/978-1-0716-2639-9_26","title":"Comparative Genomics for Evolutionary Cell Biology Using AMOEBAE: Understanding the Golgi and Beyond","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycorrhizal Fungi and Plant Interactions","field":"Agricultural and Biological Sciences","cited_by":23,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biology; Context (archaeology); Workflow; Comparative genomics; Genomics; Golgi apparatus; Computational biology; Data science; Computer science; Genome; Cell; Genetics; Gene","score_opus":0.08159265482581558,"score_gpt":0.36347302003054005,"score_spread":0.2818803652047245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311344996","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45728287,0.0040563373,0.53204393,0.0010588797,0.0007722829,0.0007695989,0.0016919272,0.0000260033,0.0022981924],"genre_scores_gemma":[0.6729147,0.0001944906,0.3240875,0.0013622213,0.00012428826,0.00016116114,0.0010771133,0.0000029786647,0.00007558177],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9981889,0.001126412,0.00017475491,0.00025778104,0.000027975202,0.0002241369],"domain_scores_gemma":[0.9967396,0.0030866677,0.00008104545,0.00004760514,0.000016278078,0.000028791186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066558475,0.00010340323,0.00018753036,0.000028441445,0.00045349775,0.000012125149,0.00017649475,0.0000713836,0.00029573188],"category_scores_gemma":[0.000068654794,0.000044752876,0.000063000756,0.00020009876,0.000045150486,0.000017432638,0.00017373207,0.00020220013,0.0000013674374],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047836198,0.0000243151,0.002003848,0.0000019640734,0.000013421047,0.0000013987166,0.00014549971,0.0003669886,0.97281724,0.02354195,0.00012409448,0.00091147114],"study_design_scores_gemma":[0.00046142982,0.0017004729,0.00076936703,0.000010342533,0.00010279692,0.0002466341,0.0135515835,0.0672455,0.046552785,0.6062954,0.262232,0.0008316517],"about_ca_topic_score_codex":0.0001880657,"about_ca_topic_score_gemma":0.000031713873,"teacher_disagreement_score":0.9262644,"about_ca_system_score_codex":0.000103136634,"about_ca_system_score_gemma":0.000013630552,"threshold_uncertainty_score":0.3487984},"labels":[],"label_agreement":null},{"id":"W4311346245","doi":"10.1007/978-1-0716-2639-9_3","title":"Immunofluorescence as a Method to Study Golgi Organization in Larval Salivary Glands of Drosophila melanogaster","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurobiology and Insect Physiology Research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto; Hospital for Sick Children","funders":"","keywords":"Golgi apparatus; Cell biology; Immunofluorescence; Organelle; Drosophila melanogaster; Biology; Subcellular localization; Cytoplasm; Antibody; Immunology; Biochemistry; Endoplasmic reticulum","score_opus":0.029392862057636054,"score_gpt":0.41997857591373317,"score_spread":0.3905857138560971,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4311346245","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9685828,0.000044990054,0.029920137,0.00028126777,0.00022609439,0.00070775853,0.000014801121,0.000023960552,0.00019820202],"genre_scores_gemma":[0.90260434,0.0000081068265,0.09567176,0.0014695043,0.000012148603,0.00016129906,0.000010974718,0.000027801436,0.000034056575],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98124605,0.016907996,0.00048603863,0.0007800012,0.00013942111,0.00044047862],"domain_scores_gemma":[0.99831957,0.000971173,0.00011186082,0.000490104,0.0000560349,0.0000512658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002965082,0.00018716884,0.00046370376,0.0005644518,0.00011969298,0.0000062244285,0.0008299603,0.00012530835,0.00031130854],"category_scores_gemma":[0.0025614856,0.00018136171,0.000047920093,0.0023222354,0.00016066367,0.000036843398,0.0011527352,0.0006984251,0.000013639153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029423673,0.00049406727,0.033853248,0.000005346878,0.000010100784,0.00016341858,0.0007442056,0.00022213106,0.96001935,0.002237254,0.000004019038,0.0019526222],"study_design_scores_gemma":[0.0009402519,0.0021407225,0.02602052,0.000004122121,0.0000068448207,0.00009604831,0.00013616425,0.00007200221,0.9623575,0.007948004,0.00010690635,0.00017088877],"about_ca_topic_score_codex":0.00016198907,"about_ca_topic_score_gemma":0.0000061702776,"teacher_disagreement_score":0.06597844,"about_ca_system_score_codex":0.000058149504,"about_ca_system_score_gemma":0.00010433845,"threshold_uncertainty_score":0.7395716},"labels":[],"label_agreement":null},{"id":"W4312067110","doi":"10.1007/978-1-0716-2895-9_5","title":"Viral Quantification in Bee Samples Using Synthetic DNA Sequences with Real-Time PCR (qPCR)","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Insect and Pesticide Research","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Deformed wing virus; Virology; Biology; Virus; Honey bee; Real-time polymerase chain reaction; Pollinator; RNA virus; Pathogen; Microbiology; Genome; Genetics; Gene; Zoology; Ecology; Pollination; Varroa destructor; Pollen","score_opus":0.08714772426773115,"score_gpt":0.3906365242914798,"score_spread":0.3034888000237487,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312067110","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.992799,0.00017973891,0.005952839,0.00033189263,0.000044520144,0.00023479122,0.000021974316,0.000021615893,0.00041364928],"genre_scores_gemma":[0.8694682,0.000030165049,0.13021529,0.000080798294,0.000031740554,0.00007461321,0.0000651105,0.0000023245595,0.000031751588],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958725,0.00298954,0.00024038934,0.0003852301,0.00013738102,0.00037496604],"domain_scores_gemma":[0.9991391,0.00064372894,0.000075490025,0.00007477802,0.00002909037,0.000037821363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022194234,0.00012187903,0.00023218115,0.00007546804,0.00016509606,0.000021531985,0.0003192159,0.000086762615,0.0005292306],"category_scores_gemma":[0.00019429131,0.000054713608,0.000044947283,0.000663516,0.00016332038,0.000027970409,0.00013439776,0.00024215177,0.0000038606995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005536757,0.00004255348,0.006829542,0.0000034442573,0.0000049958935,0.000028275532,0.00006310946,0.0003201812,0.9693339,0.0018891749,0.0000010334691,0.021428423],"study_design_scores_gemma":[0.00075345463,0.0031589612,0.089601964,0.00007616944,0.000040941824,0.00023086568,0.0015238173,0.014784578,0.8113225,0.07426927,0.0029830714,0.0012543827],"about_ca_topic_score_codex":0.0037960054,"about_ca_topic_score_gemma":0.00041618693,"teacher_disagreement_score":0.15801138,"about_ca_system_score_codex":0.00008278844,"about_ca_system_score_gemma":0.000033500837,"threshold_uncertainty_score":0.5794704},"labels":[],"label_agreement":null},{"id":"W4312067482","doi":"10.1007/978-1-0716-2895-9_2","title":"Detection of Serum Antibody Responses in Nipah Virus–Infected Pigs","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian Food Inspection Agency; University of Manitoba","funders":"","keywords":"Virology; Outbreak; Serology; Transmission (telecommunications); Antibody; Virus; Biology; Hendra Virus; Neutralization; Immunology; Ebola virus","score_opus":0.026562908952291516,"score_gpt":0.43711169556066815,"score_spread":0.4105487866083766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4312067482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9178244,0.00073028373,0.08067524,0.00018441358,0.00015534404,0.0002283349,0.000036184363,0.000023415483,0.00014241185],"genre_scores_gemma":[0.9717488,0.000034792407,0.027366905,0.0007003593,0.000010881254,0.0000543504,0.000031528663,0.000012631601,0.000039700837],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9953596,0.0038083675,0.0002953742,0.00026116305,0.0000610774,0.00021440002],"domain_scores_gemma":[0.99938834,0.00023898126,0.000079332625,0.00023607505,0.000021925749,0.000035343157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012746676,0.000105547246,0.0003424365,0.00046083808,0.00003795556,9.59492e-7,0.0000898711,0.00014049093,0.00022474238],"category_scores_gemma":[0.0011501326,0.000103511935,0.00008368715,0.0005260254,0.00012884244,0.000012834998,0.0001255692,0.00035933233,0.0000020093078],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010149574,0.00018587387,0.16032729,0.000017913944,0.000024106565,0.00011773586,0.000045274537,0.000038055117,0.83208305,0.00019144625,0.0000022956876,0.005952013],"study_design_scores_gemma":[0.0013291416,0.0012886717,0.55421865,0.000010485111,0.000038130842,0.000052928008,0.00004949288,0.00029876007,0.43938893,0.002452645,0.00077130104,0.000100900936],"about_ca_topic_score_codex":0.00011112939,"about_ca_topic_score_gemma":0.000033319433,"teacher_disagreement_score":0.39389133,"about_ca_system_score_codex":0.00004773127,"about_ca_system_score_gemma":0.00006535491,"threshold_uncertainty_score":0.42210943},"labels":[],"label_agreement":null},{"id":"W4313445110","doi":"10.1007/978-1-0716-2914-7_24","title":"A CRISPR Platform for Targeted In Vivo Screens","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Cancer Agency; University of Saskatchewan","funders":"","keywords":"CRISPR; Computational biology; Tumor microenvironment; Genome editing; In vivo; Genetic screen; In silico; Function (biology); Cancer; Biology; Bioinformatics; Computer science; Phenotype; Genetics; Gene","score_opus":0.02413438058395476,"score_gpt":0.44125969661955833,"score_spread":0.41712531603560354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313445110","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12326939,0.00076839386,0.8748113,0.000117998665,0.00023958729,0.00036885223,0.000030588944,0.000031009702,0.00036289112],"genre_scores_gemma":[0.14174326,0.00022275842,0.85642475,0.0004308336,0.00013478842,0.00035826612,0.0002352642,0.00007195242,0.00037810806],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853164,0.00015228771,0.00030568952,0.00046298275,0.000043976772,0.0005034455],"domain_scores_gemma":[0.9994604,0.00007914451,0.00003814799,0.0003327886,0.000032726344,0.00005678694],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010021833,0.00018521829,0.0002537322,0.0002682856,0.000025520863,0.0000074658547,0.0002220815,0.00030963094,0.000014393046],"category_scores_gemma":[0.00055625517,0.00019244388,0.00011481473,0.000400605,0.000054331005,0.0000015417068,0.00014109795,0.00012290035,0.0000036452702],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049953873,0.000018774288,0.0011308935,0.000021036694,0.000020906888,0.000010704635,0.000038403123,0.0015485202,0.98983747,0.0005827368,0.00031310553,0.0064275004],"study_design_scores_gemma":[0.0008551847,0.00022012473,0.00087378337,0.000010387679,0.0000066944467,0.0000065557024,0.000075734955,0.0026333886,0.959477,0.0025727053,0.033016942,0.00025148678],"about_ca_topic_score_codex":0.00003348169,"about_ca_topic_score_gemma":0.000087139975,"teacher_disagreement_score":0.032703836,"about_ca_system_score_codex":0.000017227665,"about_ca_system_score_gemma":0.00003649978,"threshold_uncertainty_score":0.7847634},"labels":[],"label_agreement":null},{"id":"W4313445763","doi":"10.1007/978-1-0716-2914-7_11","title":"Assessing the Efficacy of Immune Checkpoint Inhibitors in Preclinical Tumor Models","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Immunotherapy and Biomarkers","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Medicine; Immunotherapy; Immune system; Context (archaeology); Breast cancer; Metastasis; Cancer research; Lung cancer; Cancer; Oncology; Immunology; Internal medicine; Biology","score_opus":0.09342074133338052,"score_gpt":0.4920234129747234,"score_spread":0.3986026716413429,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313445763","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9020224,0.0023304247,0.092453964,0.0016013399,0.0003907104,0.00051081734,0.0000018581212,0.00003681015,0.00065162574],"genre_scores_gemma":[0.81255406,0.00016293571,0.1866114,0.00047047078,0.00005454111,0.000060385177,0.000018411807,0.000028969731,0.000038800048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99726987,0.0012861671,0.0008059298,0.00028062717,0.000087094566,0.00027030872],"domain_scores_gemma":[0.9985233,0.000877399,0.0001563427,0.00038717221,0.000029117742,0.000026668222],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005203279,0.00012546126,0.00045033218,0.00023891099,0.00002068161,0.0000070618985,0.00016304322,0.00015376386,0.000018664583],"category_scores_gemma":[0.0011122294,0.00008503678,0.00022458225,0.0008538407,0.0002798686,0.000026508778,0.00010644785,0.00034280476,0.0000019381134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037425564,0.000107276,0.004188148,0.00003182147,0.000052859647,0.00004463574,0.00025723435,0.00019296988,0.93150634,0.00021229826,0.0000070918195,0.063025065],"study_design_scores_gemma":[0.006215606,0.0005042715,0.12555361,0.00041132097,0.000054484764,0.000046911275,0.00054965867,0.010421588,0.84546465,0.009496979,0.0010277029,0.0002532419],"about_ca_topic_score_codex":0.00021296868,"about_ca_topic_score_gemma":0.0000079411475,"teacher_disagreement_score":0.12136546,"about_ca_system_score_codex":0.000056147474,"about_ca_system_score_gemma":0.00011594658,"threshold_uncertainty_score":0.34676993},"labels":[],"label_agreement":null},{"id":"W4313445837","doi":"10.1007/978-1-0716-2914-7","title":"The Tumor Microenvironment","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital","funders":"","keywords":"Tumor microenvironment; Cancer research; Biology; Tumor cells","score_opus":0.020760372861975126,"score_gpt":0.3979875846007482,"score_spread":0.37722721173877305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313445837","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034817408,0.16337247,0.4769922,0.0028991248,0.005565289,0.0076119015,0.0011512893,0.00022330438,0.33870268],"genre_scores_gemma":[0.000046748602,0.0078406725,0.08312637,0.0007385779,0.00042232109,0.00067269825,0.0013004057,0.00023937994,0.9056128],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99745375,0.0007570508,0.0003373373,0.0007202497,0.00012253235,0.00060910126],"domain_scores_gemma":[0.9987613,0.0001274071,0.00012967818,0.00086107384,0.000025506155,0.00009503145],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000941275,0.0003387365,0.00033002513,0.00010302046,0.00010292733,0.000025344856,0.0005658831,0.0003863419,0.000021189331],"category_scores_gemma":[0.0002550221,0.00025509574,0.00023669304,0.000078045836,0.00038117944,5.858051e-7,0.00058291835,0.00038250542,0.00009941409],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002459466,0.000076461176,0.00026866206,0.00005047839,0.000710139,0.00035659104,0.00001687088,0.000020546926,0.89745027,0.002291281,0.029803224,0.06870956],"study_design_scores_gemma":[0.00050357933,0.00036061744,0.000052888372,0.000025698517,0.000026070988,0.000021750408,0.0000059569707,0.0000046110526,0.07864507,0.016025212,0.9040484,0.00028018217],"about_ca_topic_score_codex":0.000042166557,"about_ca_topic_score_gemma":0.00024177879,"teacher_disagreement_score":0.87424517,"about_ca_system_score_codex":0.00016532648,"about_ca_system_score_gemma":0.0002998475,"threshold_uncertainty_score":0.9999901},"labels":[],"label_agreement":null},{"id":"W4313445932","doi":"10.1007/978-1-0716-2914-7_21","title":"Laser-Assisted Single-Cell Labeling and Capture","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Hôpital Maisonneuve-Rosemont","funders":"","keywords":"Single-cell analysis; Photobleaching; Live cell imaging; Computational biology; Context (archaeology); Biology; Confocal microscopy; Confocal; Computer science; Population; ENCODE; Biological system; Cell; Nanotechnology; Cell biology; Fluorescence; Genetics; Materials science; Physics","score_opus":0.03084334621267924,"score_gpt":0.3361232830923872,"score_spread":0.30527993687970795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313445932","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6852973,0.0016183793,0.31086326,0.00019288386,0.00038226653,0.00019046415,0.000016743425,0.00005684348,0.0013818677],"genre_scores_gemma":[0.40542254,0.00036456555,0.59181523,0.0010837922,0.000119014425,0.000042948956,0.0002904823,0.00007770213,0.00078369596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981387,0.0005740245,0.00027561607,0.0005494506,0.000055982815,0.00040622946],"domain_scores_gemma":[0.9994265,0.00006763419,0.00006177803,0.00031780906,0.0000431433,0.00008313194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006928567,0.00021793852,0.00026236786,0.00014986716,0.00005679336,0.000019847856,0.00019438563,0.00041828875,0.000008084813],"category_scores_gemma":[0.00019835925,0.00021352641,0.00008576905,0.00032272603,0.00013820136,0.0000020498644,0.00014392381,0.00019732723,0.0000068499453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030657226,0.000062902436,0.0026714292,0.000021607033,0.00002146273,0.000026462356,0.0000498751,0.00004604081,0.979788,0.00007975341,0.000068956346,0.01713287],"study_design_scores_gemma":[0.0009138107,0.00025954848,0.0005081962,0.00001335069,0.00001941598,0.000021530908,0.00007498356,0.0004986339,0.9854013,0.00068061997,0.011298417,0.00031021592],"about_ca_topic_score_codex":0.000051807863,"about_ca_topic_score_gemma":0.000049146718,"teacher_disagreement_score":0.280952,"about_ca_system_score_codex":0.000014632703,"about_ca_system_score_gemma":0.000032967455,"threshold_uncertainty_score":0.8707354},"labels":[],"label_agreement":null},{"id":"W4313445935","doi":"10.1007/978-1-0716-2914-7_14","title":"In Situ Measurement of Intra-tumoral Tissue Rigidity","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Materials science; In situ; Biomedical engineering; Imaging phantom; Rigidity (electromagnetism); Tissue engineering; Fabrication; Stiffness; Nanotechnology; Biophysics; Composite material; Chemistry; Optics; Pathology; Engineering","score_opus":0.03985750717615854,"score_gpt":0.3992657357906227,"score_spread":0.35940822861446414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313445935","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36311442,0.0007814231,0.6327065,0.00045379935,0.00082548754,0.00032817258,0.000012719084,0.000016613456,0.0017608611],"genre_scores_gemma":[0.8772077,0.00021383431,0.121859916,0.0002863243,0.00007926748,0.000068932306,0.000097557124,0.00002980471,0.00015667352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818736,0.0006665028,0.00037582882,0.0003780425,0.00009250854,0.0002997669],"domain_scores_gemma":[0.9993985,0.000025151423,0.000088256,0.00036581725,0.00007878026,0.000043454333],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017372007,0.00014463846,0.00025843384,0.00023163942,0.000017746785,0.000004796255,0.0002157357,0.00020880942,0.000036592628],"category_scores_gemma":[0.00049051543,0.00014815715,0.000085105996,0.0003969533,0.00006043778,0.000002619786,0.00017071709,0.00016524678,0.000011658406],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028898821,0.000066016786,0.00027486478,0.000013454947,0.000020014184,0.000021303445,0.000024401135,0.000055285742,0.99292916,0.0019271903,0.00022938848,0.0044100257],"study_design_scores_gemma":[0.0003539373,0.00023191693,0.00031861116,0.000012241414,0.000005938702,0.000008293535,0.00003424813,0.00014657875,0.961147,0.0046132854,0.032986246,0.00014166342],"about_ca_topic_score_codex":0.00010659904,"about_ca_topic_score_gemma":0.00017789348,"teacher_disagreement_score":0.5140933,"about_ca_system_score_codex":0.000035928922,"about_ca_system_score_gemma":0.00006138295,"threshold_uncertainty_score":0.60416734},"labels":[],"label_agreement":null},{"id":"W4313445951","doi":"10.1007/978-1-0716-2914-7_2","title":"Analyzing the Tumor-Immune Microenvironment by Flow Cytometry","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Flow cytometry; Tumor microenvironment; Staining; Cytometry; Pathology; Immune system; Biology; Immunology; Medicine","score_opus":0.013079071362807539,"score_gpt":0.32357358130247366,"score_spread":0.3104945099396661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313445951","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07467057,0.01557241,0.9009918,0.0014526265,0.0052940333,0.00039130382,0.000011578522,0.0001744111,0.0014412724],"genre_scores_gemma":[0.61576813,0.00557867,0.2866576,0.010440151,0.00023849653,0.0009925496,0.0042763823,0.00038774073,0.07566028],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966912,0.002086233,0.00039981003,0.0003631604,0.00001818322,0.0004413965],"domain_scores_gemma":[0.99907273,0.00035671206,0.00011629392,0.00042544003,0.0000165264,0.0000123171785],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0015878825,0.00018697583,0.00029110714,0.00029011286,0.0001532405,0.000011772614,0.0003083936,0.00021539784,0.00093988836],"category_scores_gemma":[0.00029705482,0.00014030255,0.00014702759,0.0005891097,0.00023064831,0.000028414335,0.00019226634,0.0005320455,0.0009727409],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043699987,0.000038131326,0.00091213,0.0000039331976,0.0000924926,0.000006228343,0.00007162684,0.000037594295,0.9773355,0.00013565013,0.0046010534,0.016721962],"study_design_scores_gemma":[0.00047585182,0.00009613248,0.0012120043,0.000008963887,0.000020002011,0.0000385538,0.00019800248,0.00013279957,0.74989825,0.00028569443,0.24748145,0.0001522644],"about_ca_topic_score_codex":0.0000586382,"about_ca_topic_score_gemma":0.0000014597373,"teacher_disagreement_score":0.6143342,"about_ca_system_score_codex":0.000071033515,"about_ca_system_score_gemma":0.000013374258,"threshold_uncertainty_score":0.9999734},"labels":[],"label_agreement":null},{"id":"W4313446021","doi":"10.1007/978-1-0716-2914-7_10","title":"Generation and Quantification of Cytotoxic Lymphocytes Following Oncolytic Virus Infection of Multi-cellular Tumor Spheroids","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Oncolytic virus; Tumor microenvironment; Cytotoxic T cell; Immune system; Virotherapy; Cancer research; Tumor cells; Biology; Virus; Immunology; In vitro","score_opus":0.0673810418799114,"score_gpt":0.42536926084655063,"score_spread":0.35798821896663924,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446021","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68413955,0.0011358176,0.3143479,0.000011396763,0.00010161728,0.00023519761,0.0000063726907,0.000010116386,0.00001205622],"genre_scores_gemma":[0.9142376,0.0004366516,0.084962554,0.000039888335,0.000040840765,0.00007180403,0.00014647763,0.000032955573,0.000031206033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976441,0.001175429,0.00042095475,0.0004183218,0.00009695358,0.0002442223],"domain_scores_gemma":[0.9992778,0.00006312507,0.00015682598,0.00038059283,0.000078434896,0.000043252032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018893965,0.00015506384,0.00029266687,0.0002480494,0.000039211758,0.000006983366,0.00013949882,0.00020928762,0.0000057075617],"category_scores_gemma":[0.00051810034,0.00016062346,0.00011810577,0.00046724777,0.0001501273,0.0000041419407,0.00011101832,0.00008794041,0.000002391332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001718155,0.00007256613,0.004365934,0.000035270314,0.00006280659,0.0000048452102,0.000038924423,0.00086123106,0.9861647,0.000058234706,0.0000046982473,0.008158979],"study_design_scores_gemma":[0.00093236996,0.001025873,0.00075286976,0.000012989744,0.000016849655,0.0000031012196,0.000018426152,0.009055225,0.9877097,0.00022888489,0.00010526767,0.00013843073],"about_ca_topic_score_codex":0.0001670441,"about_ca_topic_score_gemma":0.0002051727,"teacher_disagreement_score":0.23009808,"about_ca_system_score_codex":0.00003404544,"about_ca_system_score_gemma":0.00010950533,"threshold_uncertainty_score":0.6550034},"labels":[],"label_agreement":null},{"id":"W4313446023","doi":"10.1007/978-1-0716-2914-7_3","title":"Blood Sample Processing and Banking for Functional and Molecular Analyses","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Blood groups and transfusion","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Immune system; Peripheral blood mononuclear cell; Cryopreservation; Whole blood; Sample (material); Immunology; Biology; Computational biology; Chemistry; Cell biology; In vitro; Chromatography","score_opus":0.07792395673305508,"score_gpt":0.4494776513049108,"score_spread":0.3715536945718557,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446023","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32587498,0.0018724549,0.6715655,0.00037268669,0.00003664343,0.00019054126,0.0000049370065,0.000029970473,0.000052331223],"genre_scores_gemma":[0.22182474,0.00011604415,0.7773515,0.0005161155,0.00003321641,0.00005945541,0.00006786424,0.000020999298,0.000010064778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999043,0.000170579,0.0001785843,0.00033943166,0.000052762774,0.00021565105],"domain_scores_gemma":[0.9994964,0.00027155803,0.000032514585,0.00010515301,0.00004177343,0.00005258205],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006950613,0.00011440337,0.0002736881,0.00023088258,0.00006213806,0.000011205099,0.000028490289,0.00013356497,0.00000864003],"category_scores_gemma":[0.00034619137,0.000097694014,0.000053098694,0.00032930245,0.00008889076,0.000016545737,0.00004227396,0.00011603658,2.2954094e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058151352,0.000032437343,0.010956962,0.00012166168,0.00007069249,0.000033364657,0.000060820374,0.000009794075,0.92694694,0.0019440035,0.0000023457596,0.05976285],"study_design_scores_gemma":[0.007311233,0.0011498708,0.039273392,0.00021771295,0.001102598,0.00029406865,0.0002375904,0.01143618,0.82343835,0.11230114,0.0027267335,0.0005111497],"about_ca_topic_score_codex":0.000032659053,"about_ca_topic_score_gemma":0.0000046373175,"teacher_disagreement_score":0.110357136,"about_ca_system_score_codex":0.000005281221,"about_ca_system_score_gemma":0.000026947242,"threshold_uncertainty_score":0.39838463},"labels":[],"label_agreement":null},{"id":"W4313446076","doi":"10.1007/978-1-0716-2914-7_12","title":"Fibroblast Isolation from Mammary Gland Tissue and Syngeneic Murine Breast Cancer Models","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Jewish General Hospital; McGill University","funders":"","keywords":"Cancer-Associated Fibroblasts; Tumor microenvironment; Extracellular matrix; Mammary tumor; Cancer research; Fibroblast; Crosstalk; Immune system; Biology; Breast cancer; Cell culture; Cancer; Immunology; Cell biology","score_opus":0.028129367877767337,"score_gpt":0.3919392656193752,"score_spread":0.3638098977416079,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446076","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15331794,0.0035558487,0.84039414,0.0017839493,0.00016768691,0.00026862902,0.0001230204,0.000058282738,0.00033048578],"genre_scores_gemma":[0.08453513,0.003021851,0.91061753,0.0008236043,0.0002007932,0.00011157399,0.0002309334,0.00004732484,0.0004112587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99883235,0.0002894932,0.000208271,0.00037479508,0.00005814138,0.00023692452],"domain_scores_gemma":[0.9994903,0.00009617053,0.00004862328,0.00024863883,0.000032277487,0.00008395031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003550704,0.00013882149,0.0003364605,0.00017928597,0.00002369202,0.000008530882,0.00006424583,0.00014183596,0.000095018215],"category_scores_gemma":[0.000031301843,0.0001218972,0.000042459676,0.00032150978,0.000056920537,0.000032198695,0.00011380524,0.00013522734,0.0000047126646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091855276,0.000022621565,0.002513143,0.000049733266,0.000064510125,0.00007023971,0.00008962369,0.00021944032,0.81682944,0.0002920425,0.00008418498,0.17967317],"study_design_scores_gemma":[0.008869742,0.00079965114,0.09682818,0.00074814324,0.00047616646,0.00042559532,0.00015774976,0.0664626,0.73096275,0.06744162,0.025612757,0.0012150652],"about_ca_topic_score_codex":0.0013349468,"about_ca_topic_score_gemma":0.00011617072,"teacher_disagreement_score":0.17845811,"about_ca_system_score_codex":0.000041205556,"about_ca_system_score_gemma":0.00005086394,"threshold_uncertainty_score":0.49708235},"labels":[],"label_agreement":null},{"id":"W4313446133","doi":"10.1007/978-1-0716-2914-7_23","title":"Intravital Microscopy of the Metastatic Pulmonary Environment","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Medical Imaging and Pathology Studies","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; University of Calgary; Jewish General Hospital","funders":"","keywords":"Intravital microscopy; Metastasis; Niche; Cell; Pathology; In vivo; Cancer; Medicine; Biology; Internal medicine","score_opus":0.03734437746945774,"score_gpt":0.43309978855781384,"score_spread":0.3957554110883561,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446133","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44874927,0.0025594535,0.5406299,0.0057259495,0.0005634219,0.00046230113,0.000019930672,0.00004178185,0.0012480051],"genre_scores_gemma":[0.13449298,0.00026309612,0.8627112,0.0018580594,0.000028183258,0.000062764244,0.000025253386,0.000020526204,0.0005379674],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984161,0.0008636646,0.00022975,0.00019831455,0.00006516429,0.00022695336],"domain_scores_gemma":[0.99938554,0.00024578578,0.00005163403,0.00027459356,0.00000922165,0.000033206674],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012634711,0.0000900824,0.00030270455,0.00008968589,0.000026509326,7.454032e-7,0.00010475652,0.00006527224,0.00003105087],"category_scores_gemma":[0.0006684884,0.000056077555,0.000083731895,0.00023175601,0.00045870015,0.0000035965013,0.00016759693,0.00021509244,0.000014099487],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017469843,0.00006873282,0.031058956,0.00003828669,0.000052454678,0.00014960302,0.00016770489,0.000003959374,0.9552955,0.00035802883,0.0000768572,0.012712452],"study_design_scores_gemma":[0.0017648663,0.00045366678,0.11504549,0.0001510074,0.00030482776,0.00036479475,0.000749095,0.00093770283,0.83963835,0.025042737,0.015274337,0.00027310406],"about_ca_topic_score_codex":0.0000080001055,"about_ca_topic_score_gemma":3.665378e-7,"teacher_disagreement_score":0.3220813,"about_ca_system_score_codex":0.0000139710255,"about_ca_system_score_gemma":0.000021711743,"threshold_uncertainty_score":0.22867763},"labels":[],"label_agreement":null},{"id":"W4313446141","doi":"10.1007/978-1-0716-2851-5_20","title":"Testing the Role of Focal Adhesion Kinase (FAK) in Topography-Mediated Stem Cell Differentiation by Inhibiting FAK Phosphorylation","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"National Heart, Lung, and Blood Institute","keywords":"Focal adhesion; Cell biology; Stem cell; Mechanotransduction; Phosphorylation; Western blot; Kinase; Chemistry; Biology; Biochemistry","score_opus":0.016314521509845165,"score_gpt":0.30754011930426167,"score_spread":0.2912255977944165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446141","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8889102,0.0012085456,0.109151505,0.000044849963,0.00013957101,0.00023984986,0.000017839893,0.000015414027,0.00027226427],"genre_scores_gemma":[0.9846411,0.00009412926,0.014700484,0.00005132414,0.000024766383,0.000054494292,0.00038257914,0.000022984334,0.000028191222],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813896,0.0007443938,0.00041385245,0.00035724894,0.00007587575,0.00026964402],"domain_scores_gemma":[0.9992968,0.00018907122,0.00018463309,0.0002313814,0.00006542662,0.000032731656],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009424144,0.00015165139,0.00018876018,0.00018769737,0.000053284773,0.000010829913,0.00016531842,0.00023906554,0.0000075877965],"category_scores_gemma":[0.00030299998,0.00013222892,0.0000961485,0.0006414419,0.000046871297,0.0000040296704,0.00015005532,0.00019856896,0.0000025084676],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018098224,0.00005660134,0.0051558027,0.000010231054,0.000010090604,0.0000020265604,0.00006206106,0.00009340509,0.9750501,0.00018584028,0.000018144076,0.019337589],"study_design_scores_gemma":[0.00032736987,0.00018177801,0.0012660583,0.000021223554,0.000009294832,0.000001722698,0.00034480434,0.010963255,0.984306,0.0012366136,0.0012080915,0.00013380931],"about_ca_topic_score_codex":0.000121583944,"about_ca_topic_score_gemma":0.00002380245,"teacher_disagreement_score":0.095730886,"about_ca_system_score_codex":0.0000200593,"about_ca_system_score_gemma":0.000027285256,"threshold_uncertainty_score":0.53921384},"labels":[],"label_agreement":null},{"id":"W4313446176","doi":"10.1007/978-1-0716-2914-7_19","title":"Profiling the Epigenetic Landscape of the Tumor Microenvironment Using Chromatin Immunoprecipitation Sequencing","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Institute for Research in Immunology and Cancer; Université de Montréal; McGill University Health Centre","funders":"","keywords":"Epigenetics; Reprogramming; Biology; Tumor microenvironment; Chromatin immunoprecipitation; Chromatin; Histone; Tumor progression; Phenotype; Computational biology; Cancer research; Cell; Cancer; Genetics; Gene; Tumor cells; Gene expression","score_opus":0.026159818369968627,"score_gpt":0.35390613601315546,"score_spread":0.32774631764318685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446176","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7897759,0.0023456814,0.20725146,0.00006588167,0.000183445,0.00028911672,0.000005718844,0.000005343887,0.00007745288],"genre_scores_gemma":[0.7488478,0.00018949981,0.25067616,0.00009312628,0.000048278576,0.0000415558,0.000043249565,0.000026742851,0.000033585766],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99779177,0.0012135851,0.00036786997,0.00029196884,0.00008571083,0.00024910906],"domain_scores_gemma":[0.9991832,0.00008673517,0.00019434393,0.00048308456,0.00003330129,0.000019385054],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015602825,0.00013695477,0.00016350744,0.00007046836,0.00008766775,0.000008509309,0.00029984544,0.0001213447,0.000006274621],"category_scores_gemma":[0.00038078582,0.00009245692,0.00010649014,0.000303066,0.0001485723,0.0000015043062,0.00024250508,0.00011922863,0.0000019792176],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008585098,0.000008789368,0.010494112,0.0000140020375,0.000021122727,9.470869e-7,0.0000840905,0.00919223,0.9780227,0.00012309107,0.0000013409256,0.0020289926],"study_design_scores_gemma":[0.0001940136,0.00007393984,0.007823148,0.000017833381,0.000017391247,0.0000033438803,0.00016879516,0.0045283874,0.98518515,0.0015787632,0.00030242125,0.00010683922],"about_ca_topic_score_codex":0.000027317994,"about_ca_topic_score_gemma":0.000007387164,"teacher_disagreement_score":0.043424707,"about_ca_system_score_codex":0.00003008789,"about_ca_system_score_gemma":0.00007097038,"threshold_uncertainty_score":0.37702838},"labels":[],"label_agreement":null},{"id":"W4313446177","doi":"10.1007/978-1-0716-2914-7_17","title":"Spheroids as a 3D Model of the Hypoxic Tumor Microenvironment","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":17,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Spheroid; 3D cell culture; Basement membrane; Adhesion; Cell biology; Cell culture; Biophysics; Chemistry; Microscopy; Microfluidics; Cell; Biomedical engineering; Pathology; Materials science; Biology; Nanotechnology; Medicine; Biochemistry","score_opus":0.028429290255484675,"score_gpt":0.3705804085250674,"score_spread":0.3421511182695827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446177","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3900181,0.00019835608,0.60806984,0.0001490878,0.0001560395,0.00015543251,0.0000039674856,0.00006149085,0.0011876767],"genre_scores_gemma":[0.121304095,0.00009460247,0.87812656,0.0001555705,0.0000147360815,0.00005788298,0.0000027920628,0.00003952556,0.00020420803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863636,0.0004665656,0.00023721583,0.00018871776,0.00012398828,0.0003471523],"domain_scores_gemma":[0.99930793,0.00021890215,0.000022782262,0.00039708035,0.000007867153,0.000045426124],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013337934,0.000104476494,0.00018287881,0.00010650064,0.000016764267,0.0000033571598,0.00043858212,0.0001089413,0.000042206007],"category_scores_gemma":[0.00066878553,0.00008019314,0.000070291644,0.00045503318,0.00022513514,0.000006234663,0.00033574522,0.00028359218,0.000041471714],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000022401994,0.000009599488,0.0005655313,0.000029151151,0.000015828738,0.0000069121115,0.000044083612,0.027902052,0.956439,0.0004505375,0.000037040565,0.014497977],"study_design_scores_gemma":[0.00018292235,0.000030312214,0.0008967412,0.000020774276,0.000004934499,0.0000042148804,0.000015600703,0.2830031,0.7004528,0.013716149,0.0015670471,0.00010543801],"about_ca_topic_score_codex":0.0000126977875,"about_ca_topic_score_gemma":0.0000011520748,"teacher_disagreement_score":0.27005672,"about_ca_system_score_codex":0.00005514258,"about_ca_system_score_gemma":0.000024428173,"threshold_uncertainty_score":0.3270181},"labels":[],"label_agreement":null},{"id":"W4313446229","doi":"10.1007/978-1-0716-2914-7_5","title":"Visualizing NETosis Using a Novel Neutrophil Extracellular Trap-Specific Marker","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Neutrophil extracellular traps; Histone; Histone H3; Biology; Cell biology; Citrullination; Immunology; Inflammation; DNA; Biochemistry; Citrulline","score_opus":0.0667694742286322,"score_gpt":0.38276727848608527,"score_spread":0.31599780425745305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446229","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34894624,0.004371472,0.6447961,0.00017298902,0.0009905092,0.00033198742,0.000024125364,0.0001552637,0.00021130375],"genre_scores_gemma":[0.19015212,0.000713131,0.80657333,0.00084956,0.000130477,0.00016890874,0.00033667727,0.00019332065,0.0008824414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995006,0.0023631938,0.00065849815,0.00092668796,0.000046571316,0.0009990147],"domain_scores_gemma":[0.9987282,0.0003895364,0.00017506556,0.0005885079,0.00006841931,0.0000502275],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00196204,0.0004335145,0.0007077448,0.0007514954,0.00019594075,0.000022795934,0.0004710955,0.0006435939,0.00046790522],"category_scores_gemma":[0.00014286004,0.0004131248,0.0002476892,0.0012060574,0.00032445608,0.000064406675,0.00030329745,0.00062102044,0.0002442863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000092774215,0.000100024336,0.00026302645,0.000014133906,0.00012379525,0.0000907027,0.00014437763,0.000091182286,0.9668115,0.022835158,0.0000445151,0.00938884],"study_design_scores_gemma":[0.0014379331,0.00018381924,0.0005192864,0.00004155198,0.00004053279,0.000101994374,0.00018932854,0.00022089118,0.94676024,0.004319472,0.04569524,0.00048971263],"about_ca_topic_score_codex":0.000059954178,"about_ca_topic_score_gemma":0.0000032466949,"teacher_disagreement_score":0.16177726,"about_ca_system_score_codex":0.000085107706,"about_ca_system_score_gemma":0.000052550928,"threshold_uncertainty_score":0.99983203},"labels":[],"label_agreement":null},{"id":"W4313446271","doi":"10.1007/978-1-0716-2914-7_9","title":"Mouse Models of Obesity to Study the Tumor-Immune Microenvironment","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Tumor microenvironment; Obesity; Immune system; Inflammation; Cancer; Medicine; Immunology; Biology; Internal medicine","score_opus":0.03240270311581763,"score_gpt":0.3687542719190571,"score_spread":0.33635156880323946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446271","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8135683,0.00051031733,0.18464793,0.0002525968,0.00007598527,0.0007674051,0.000007404152,0.00002770769,0.00014238195],"genre_scores_gemma":[0.75510794,0.00013494749,0.24310896,0.00086646684,0.000053603962,0.00023644384,0.000032264717,0.000034031607,0.00042533662],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814814,0.0008950969,0.0003767754,0.00025211272,0.0001036308,0.00022425856],"domain_scores_gemma":[0.99916583,0.000118848686,0.00007738759,0.00053956365,0.000031546122,0.00006681021],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014603641,0.00012730536,0.00037853047,0.00017014181,0.00003547394,0.0000026375665,0.00018254401,0.000046973237,0.000031670654],"category_scores_gemma":[0.0003702493,0.00008832797,0.00009263861,0.0003699433,0.00009516228,0.000012761386,0.00016019624,0.000101111305,0.000015441732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011399113,0.00047846124,0.01644206,0.00002546043,0.0001427498,0.00005291819,0.0012591991,0.0015041608,0.9666192,0.0012825675,0.000026965045,0.012052263],"study_design_scores_gemma":[0.0026436478,0.0007553554,0.2804262,0.000031657455,0.0003773589,0.000020702839,0.0017078975,0.0014678359,0.6983319,0.00942186,0.0045137703,0.0003018308],"about_ca_topic_score_codex":0.00009803638,"about_ca_topic_score_gemma":0.0000054138054,"teacher_disagreement_score":0.2682873,"about_ca_system_score_codex":0.0000221419,"about_ca_system_score_gemma":0.0000321355,"threshold_uncertainty_score":0.36019102},"labels":[],"label_agreement":null},{"id":"W4313446304","doi":"10.1007/978-1-0716-2914-7_16","title":"Proteomic Assessment of the Murine Mammary Gland Extracellular Matrix","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; McGill University; Research Manitoba; Jewish General Hospital","funders":"","keywords":"Extracellular matrix; Cell biology; Tumor microenvironment; Context (archaeology); Glycoprotein; Metastasis; Chemistry; Biology; Matrix (chemical analysis); Cancer; Cancer research; Biochemistry; Tumor cells","score_opus":0.01937633836649757,"score_gpt":0.42062687129275195,"score_spread":0.4012505329262544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446304","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10465478,0.00016379307,0.89336807,0.00038026244,0.000027023349,0.00028370554,0.000012699498,0.00007517287,0.0010344974],"genre_scores_gemma":[0.024175126,0.00007648635,0.9745477,0.00001953242,0.000014821534,0.000406457,0.00002087656,0.000017980488,0.0007210642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99901956,0.0001844991,0.0002869452,0.00025805156,0.000053569627,0.00019735769],"domain_scores_gemma":[0.9991291,0.00007488803,0.0001334441,0.00061786926,0.00002286732,0.000021817095],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006140213,0.00011048517,0.0001923044,0.000061585706,0.000036120844,0.000004429906,0.0004262509,0.00015664363,0.00004292633],"category_scores_gemma":[0.000080632286,0.0000855091,0.00008711293,0.0003276239,0.00008810836,0.000011656189,0.00030414562,0.0002545144,0.000001434339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000026537102,0.00002094913,0.0034077982,0.000038224003,0.000009154395,0.000004561396,0.0000072373514,0.00009705287,0.9545628,0.03826442,0.0000073764445,0.0035777814],"study_design_scores_gemma":[0.00017537776,0.000011448861,0.00045301585,0.000016929731,0.0000060158145,0.0000061938194,0.0000053057684,0.002130095,0.911295,0.08215229,0.003655551,0.00009279819],"about_ca_topic_score_codex":0.00001591399,"about_ca_topic_score_gemma":6.512964e-7,"teacher_disagreement_score":0.0811796,"about_ca_system_score_codex":0.000036254547,"about_ca_system_score_gemma":0.00004109832,"threshold_uncertainty_score":0.34869596},"labels":[],"label_agreement":null},{"id":"W4313446325","doi":"10.1007/978-1-0716-2914-7_1","title":"Imaging Mass Cytometry in Immuno-Oncology","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Multiplex; Mass cytometry; Workflow; Flow cytometry; Pathology; Cytometry; Computational biology; Medicine; Computer science; Biology; Bioinformatics; Immunology; Phenotype","score_opus":0.023778523063904298,"score_gpt":0.39255484083781617,"score_spread":0.36877631777391184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446325","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2855907,0.0017538551,0.7086392,0.0003895751,0.00079857,0.0002491799,0.000010907433,0.000049606537,0.0025183633],"genre_scores_gemma":[0.46830025,0.0007500779,0.5285628,0.0014285275,0.00016616793,0.00012821441,0.00029322106,0.00009251949,0.00027821527],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99701357,0.0012038971,0.00046109635,0.00062837545,0.00006657932,0.0006264786],"domain_scores_gemma":[0.99925727,0.00010895542,0.000079074285,0.00044946096,0.000040275536,0.00006494982],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018456653,0.00023848079,0.00038338374,0.00051219616,0.000038344275,0.000013322656,0.00040378212,0.00040749984,0.000021366932],"category_scores_gemma":[0.0004517492,0.00024883755,0.00013576282,0.0008347333,0.00018155409,0.000003144582,0.00017552105,0.00028480738,0.000018104092],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000785908,0.000052867526,0.037095502,0.000012528813,0.000021848358,0.0001066037,0.00005149885,0.00011262681,0.9298639,0.00026774575,0.000057419144,0.032278817],"study_design_scores_gemma":[0.0017855479,0.00029916322,0.004873177,0.000020003125,0.000012441424,0.000036689882,0.00018010102,0.0013502012,0.94789135,0.005214389,0.037849832,0.00048710298],"about_ca_topic_score_codex":0.00009269578,"about_ca_topic_score_gemma":0.000055215445,"teacher_disagreement_score":0.18270954,"about_ca_system_score_codex":0.00006447052,"about_ca_system_score_gemma":0.00009998554,"threshold_uncertainty_score":0.99999636},"labels":[],"label_agreement":null},{"id":"W4313446348","doi":"10.1007/978-1-0716-2914-7_8","title":"Assessing the Immune Regulatory Role of Metabolites In Vitro","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; University of Ottawa; University of British Columbia; University of Victoria","funders":"","keywords":"Immune system; Metabolite; Tumor microenvironment; In vitro; Biology; In vitro toxicology; Cell; Regulatory T cell; Cell type; Computational biology; T cell; Cell biology; Immunology; Biochemistry; IL-2 receptor","score_opus":0.01917065026674262,"score_gpt":0.36780716311670475,"score_spread":0.3486365128499621,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313446348","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.918413,0.027582256,0.044987764,0.00044369165,0.004201495,0.00038622957,0.0000032223445,0.000102943144,0.0038794447],"genre_scores_gemma":[0.9740179,0.00015148098,0.024492232,0.00020223162,0.00001622345,0.000060678154,0.00011750169,0.000023625791,0.00091811165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962055,0.0027868925,0.00046591982,0.00023273611,0.00001789145,0.00029102262],"domain_scores_gemma":[0.99891466,0.00055198674,0.00014691184,0.0003430447,0.000037660302,0.0000057124616],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002289341,0.00012541134,0.0003390947,0.00038128113,0.00005050032,0.000007544099,0.00021895941,0.00025613655,0.00014285],"category_scores_gemma":[0.0005694493,0.000094384195,0.00011553217,0.000570375,0.00023562905,0.000056129655,0.00011745411,0.00039564044,0.000058636917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000054788212,0.00003361821,0.0008434299,0.0000048865113,0.000043490345,0.0000017749421,0.00018032722,0.00002116119,0.96395373,0.0028672752,0.000019003024,0.03197654],"study_design_scores_gemma":[0.00040031062,0.00002932504,0.012039591,0.000011516622,0.000011948507,0.000011667325,0.00091425277,0.00008789641,0.96566725,0.002872022,0.017865997,0.00008822423],"about_ca_topic_score_codex":0.00015410167,"about_ca_topic_score_gemma":0.0000023466719,"teacher_disagreement_score":0.05560496,"about_ca_system_score_codex":0.000029872393,"about_ca_system_score_gemma":0.00003363543,"threshold_uncertainty_score":0.38488758},"labels":[],"label_agreement":null},{"id":"W4313546174","doi":"10.1007/978-1-0716-2958-1_8","title":"Reconstitution of Organelle Transport Along Microtubules In Vitro","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Microtubule; Cell biology; Dynein; Molecular motor; Organelle; Motor protein; Kinesin; Motility; Vesicular transport protein; Biology; Endocytic cycle; Biogenesis; Intracellular; Chemistry; Endocytosis; Vesicle; Cell; Biochemistry; Membrane","score_opus":0.015290504393018644,"score_gpt":0.3389247236426824,"score_spread":0.32363421924966373,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4313546174","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.74095684,0.0005546035,0.2577154,0.0000652645,0.00015561048,0.0002029759,0.000026058931,0.000012842669,0.00031037506],"genre_scores_gemma":[0.7363789,0.0005704041,0.26218352,0.00015595969,0.000033826054,0.000048326627,0.0005070307,0.00002889479,0.00009311816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982753,0.00047434424,0.0004531808,0.00042472658,0.000041678082,0.00033078634],"domain_scores_gemma":[0.9994622,0.00003978245,0.00008771412,0.00033611353,0.00003772372,0.000036497615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010602969,0.00016511143,0.0003163685,0.00028080714,0.000019669325,0.0000023798343,0.00022702898,0.00034964082,0.000010267722],"category_scores_gemma":[0.00017559475,0.0001725351,0.000110981186,0.00045725683,0.00017888662,0.0000021497858,0.00008493429,0.0001445727,0.0000055322653],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008397195,0.000047739322,0.0082120085,0.000026842648,0.000022746483,0.00002320899,0.000057136036,0.00015670019,0.98412853,0.00033272977,0.000013889839,0.0068945168],"study_design_scores_gemma":[0.00054706197,0.00007850945,0.0016885685,0.000016081542,0.000008893326,0.000016017171,0.000065580665,0.00011455703,0.99296105,0.0008063862,0.0035208652,0.00017641774],"about_ca_topic_score_codex":0.00017082927,"about_ca_topic_score_gemma":0.00012926004,"teacher_disagreement_score":0.008832552,"about_ca_system_score_codex":0.000018683017,"about_ca_system_score_gemma":0.00008961099,"threshold_uncertainty_score":0.70357776},"labels":[],"label_agreement":null},{"id":"W4317240871","doi":"10.1007/978-1-0716-2887-4_13","title":"Analysis of Integrin-Dependent Melanoblast Migration During Development","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"melanin and skin pigmentation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Neural crest; Melanocyte; Integrin; Biology; Cell biology; Context (archaeology); Cell migration; Neural cell adhesion molecule; Focal adhesion; Cell adhesion; Cell; Cancer research; Genetics; Signal transduction; Melanoma; Embryo","score_opus":0.018753522688315788,"score_gpt":0.37624373022228064,"score_spread":0.3574902075339649,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317240871","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72250503,0.00008984707,0.27702647,0.000023487211,0.00007778568,0.000090150854,0.0000048201946,0.0000097932925,0.00017264087],"genre_scores_gemma":[0.7815652,0.000112280955,0.21729918,0.00005071551,0.000023024118,0.000058141257,0.000588339,0.000015812684,0.00028731435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984929,0.000499406,0.00037632388,0.00034140117,0.00008532087,0.00020465763],"domain_scores_gemma":[0.999521,0.00003161683,0.00011084023,0.00025294797,0.0000495321,0.000034046014],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009206702,0.00012369487,0.00025240678,0.0004955821,0.000028200126,0.0000053910726,0.00015569017,0.00017220606,0.000025624016],"category_scores_gemma":[0.0001856077,0.000118986434,0.0000993674,0.00073386956,0.0000430596,0.0000015956471,0.0001225275,0.000072299685,0.0000054148895],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034255158,0.000030391906,0.05276085,0.000013529033,0.00034871575,0.000005489041,0.00017104155,0.0007539195,0.9427256,0.0001406083,0.0000055861037,0.0030100385],"study_design_scores_gemma":[0.00027518114,0.00006195433,0.045748387,0.0000066616285,0.00006761005,0.0000016495908,0.000120402416,0.0004970649,0.95260763,0.000098430755,0.00039247048,0.0001225322],"about_ca_topic_score_codex":0.00002873315,"about_ca_topic_score_gemma":0.00017342289,"teacher_disagreement_score":0.059727293,"about_ca_system_score_codex":0.000024146639,"about_ca_system_score_gemma":0.000036974063,"threshold_uncertainty_score":0.4852126},"labels":[],"label_agreement":null},{"id":"W4317240958","doi":"10.1007/978-1-0716-2966-6_21","title":"Lipid Extraction and Sample Preservation Techniques for Stable Isotope Analysis and Ecological Assays","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Isotope Analysis in Ecology","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Fisheries and Oceans Canada; University of Manitoba; McGill University","funders":"","keywords":"Stable isotope ratio; Polar; Isotope; Isotope analysis; Extraction (chemistry); Isotopes of carbon; Chemistry; Distillation; δ13C; Environmental chemistry; Chromatography; Ecology; Biology; Total organic carbon","score_opus":0.029945719072349518,"score_gpt":0.39274629373841113,"score_spread":0.36280057466606164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317240958","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19856429,0.000020667783,0.8003375,0.0003529954,0.000033917982,0.00032362356,0.0000071507243,0.000045881574,0.0003140091],"genre_scores_gemma":[0.047437113,0.00013296731,0.9516725,0.00026878298,0.000014589638,0.0003106407,0.000044285785,0.000009321717,0.00010980201],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99817306,0.00080689305,0.0002447666,0.000450852,0.000049945265,0.00027447252],"domain_scores_gemma":[0.9986122,0.0010573502,0.00008640622,0.00019488663,0.000012640763,0.00003649093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002591545,0.00010782766,0.0002909656,0.00025185366,0.00007953191,0.000015656662,0.00012289119,0.00021875332,0.00029165472],"category_scores_gemma":[0.0013035083,0.00009781848,0.000060660404,0.0009312393,0.00017096626,0.00008275895,0.0002655861,0.000108697604,0.0000041510934],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016338292,0.00004017195,0.5151929,0.0000061732535,0.00009005454,0.0000035373137,0.000053523516,0.00034461013,0.4070586,0.0009993153,0.00010350797,0.076091245],"study_design_scores_gemma":[0.00045712283,0.00055802515,0.6450387,0.0000024995547,0.00037750034,0.0000065114336,0.0001361676,0.047712818,0.15021682,0.1205722,0.03449193,0.0004296531],"about_ca_topic_score_codex":0.00045862625,"about_ca_topic_score_gemma":0.00093730434,"teacher_disagreement_score":0.25684178,"about_ca_system_score_codex":0.00006432544,"about_ca_system_score_gemma":0.000004962649,"threshold_uncertainty_score":0.39889222},"labels":[],"label_agreement":null},{"id":"W4317241035","doi":"10.1007/978-1-0716-2966-6","title":"Lipidomics","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Leonard M. Miller School of Medicine, University of Miami; Leonard M. Miller School of Medicine; University of Oklahoma Health Sciences Center; Health Science Center, University of Tennessee; College of Engineering, Michigan State University; Directorate for Biological Sciences; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Università degli Studi di Perugia; University of Oklahoma; Sylvester Comprehensive Cancer Center, University of Miami Health Systems; Universität Leipzig; Centre National de la Recherche Scientifique; Jawaharlal Nehru University; University of Texas at Arlington; McGill University; Oklahoma Medical Research Foundation; University of Miami; Universidad de Huelva; Michigan State University","keywords":"Lipidomics; Biology; Bioinformatics","score_opus":0.022898533630019792,"score_gpt":0.37868518482926244,"score_spread":0.35578665119924263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317241035","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034385428,0.016380228,0.67217726,0.00032204253,0.005123105,0.00088794396,0.00018612809,0.0000984452,0.30448103],"genre_scores_gemma":[0.000011787922,0.0053855493,0.41928744,0.00069714634,0.0008301327,0.00012196973,0.00087397295,0.00020851012,0.5725835],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99698627,0.00062325696,0.0005944632,0.0010726956,0.00010298948,0.0006203167],"domain_scores_gemma":[0.9985424,0.0001194825,0.00025282914,0.00091169524,0.00008400983,0.00008955686],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0014764596,0.00053751055,0.0008891974,0.0004364451,0.00005293666,0.000017786102,0.0005864454,0.0012467767,0.000039008086],"category_scores_gemma":[0.000837308,0.00053968356,0.00036665756,0.00021423478,0.00025585215,8.977324e-7,0.00079387263,0.00054296525,0.00006520633],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006403088,0.000039558567,0.00009919641,0.00006779426,0.00046250434,0.00004602929,0.000017057993,0.000022224649,0.92620146,0.03279946,0.027674403,0.0125062885],"study_design_scores_gemma":[0.0005587814,0.0002937488,0.000027266113,0.000030153496,0.000069709065,0.000014257305,0.000009718837,0.000016229824,0.053126324,0.07206802,0.8730982,0.0006876177],"about_ca_topic_score_codex":0.000008068816,"about_ca_topic_score_gemma":0.000037681726,"teacher_disagreement_score":0.8730751,"about_ca_system_score_codex":0.00007672671,"about_ca_system_score_gemma":0.00027750226,"threshold_uncertainty_score":0.9997055},"labels":[],"label_agreement":null},{"id":"W4317781165","doi":"10.1007/978-1-0716-2982-6_16","title":"Interrogation of Functional miRNA-Target Interactions by CRISPR/Cas9 Genome Engineering","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Biotechnology and Biological Sciences Research Council; Wellcome Trust","keywords":"CRISPR; Biology; Computational biology; microRNA; Cas9; Gene silencing; Guide RNA; Genome; Genetics; Genome engineering; Gene","score_opus":0.015589010850788692,"score_gpt":0.4095819477102664,"score_spread":0.3939929368594777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4317781165","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14163807,0.0006356198,0.8569508,0.000075716445,0.0004073795,0.000097508746,0.00002304738,0.000025593154,0.0001462331],"genre_scores_gemma":[0.5854046,0.00010813562,0.41286597,0.00011495842,0.0001281899,0.00009144663,0.00082632137,0.00005322523,0.00040721288],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989233,0.00015584088,0.0003020693,0.00031376645,0.00005441489,0.00025058357],"domain_scores_gemma":[0.9995473,0.000051581428,0.000058871716,0.000247203,0.000048647034,0.000046395664],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048276025,0.00015035682,0.00018699761,0.00021581641,0.000019466008,0.000005528475,0.00014407563,0.00015136594,0.00004205713],"category_scores_gemma":[0.0001970289,0.00016474805,0.00009881153,0.0002976127,0.000041020015,0.0000027671967,0.00012532501,0.00014042,0.0000068556437],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016916476,0.000020865986,0.00035586167,0.000017905924,0.000046968038,0.0000022429117,0.000038523827,0.014013362,0.98426294,0.00016544401,0.00018053896,0.0008784338],"study_design_scores_gemma":[0.0002799239,0.00011140063,0.001597953,0.000009776659,0.0000099144945,0.000012652986,0.0000838496,0.005121681,0.9682908,0.00023580741,0.024067748,0.00017845708],"about_ca_topic_score_codex":0.000013666419,"about_ca_topic_score_gemma":0.000005135084,"teacher_disagreement_score":0.44408485,"about_ca_system_score_codex":0.000023898676,"about_ca_system_score_gemma":0.000028170081,"threshold_uncertainty_score":0.6718231},"labels":[],"label_agreement":null},{"id":"W4318476477","doi":"10.1007/978-1-0716-2970-3_22","title":"Gaining Wings to FLY: Using Drosophila Oogenesis as an Entry Point for Citizen Scientists in Laboratory Research","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Sciences and Engineering Research Council of Canada","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Cancer Institute","keywords":"Citizen science; Crowdsourcing; Biorepository; Leverage (statistics); Drosophila (subgenus); Engineering ethics; Public relations; Political science; Sociology; Biology; Biobank; Engineering; Computer science; Genetics","score_opus":0.060364811074046065,"score_gpt":0.5284048548848994,"score_spread":0.46804004381085335,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318476477","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68666816,0.00037736734,0.31203556,0.0001548948,0.00022819937,0.00037225813,0.000018058285,0.000020077436,0.00012545033],"genre_scores_gemma":[0.4312016,0.00005305957,0.56762487,0.0004571143,0.000176476,0.00019393502,0.000108444896,0.00007464828,0.00010986768],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99714017,0.00085798063,0.0003345912,0.00078238454,0.00012746833,0.00075740117],"domain_scores_gemma":[0.9990677,0.00012232504,0.000035594265,0.00048272326,0.00014249321,0.00014911512],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0049712933,0.00019066015,0.00026647892,0.0006713418,0.00009158652,0.0000302373,0.00035838658,0.00029700366,0.0000062898366],"category_scores_gemma":[0.0015918631,0.00021728402,0.000074502976,0.0012079469,0.000114565046,0.000004050356,0.00035063698,0.0001782031,0.000005655447],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000058847985,0.000024825693,0.0019762383,0.000025177447,0.000012118436,0.000029007475,0.00021063433,0.003227781,0.99009585,0.0004267668,0.000042905387,0.003869853],"study_design_scores_gemma":[0.00060246966,0.0003859401,0.0015024173,0.000038189602,0.0000064887004,0.000011013716,0.00026001263,0.0030315898,0.98500884,0.002747141,0.0061032996,0.00030262303],"about_ca_topic_score_codex":0.00006803359,"about_ca_topic_score_gemma":0.000035978897,"teacher_disagreement_score":0.2555893,"about_ca_system_score_codex":0.000059239366,"about_ca_system_score_gemma":0.00014118005,"threshold_uncertainty_score":0.8860585},"labels":[],"label_agreement":null},{"id":"W4318828510","doi":"10.1007/978-1-0716-2962-8","title":"Computational Epigenomics and Epitranscriptomics","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Division of Mathematical Sciences; Directorate for Biological Sciences; Shenzhen Bay Laboratory; Fujian Medical University; Purdue University; Centre National de la Recherche Scientifique; School of Medicine, Indiana University; Johannes Gutenberg-Universität Mainz; Deutsches Zentrum für Herz-Kreislaufforschung; Academia Sinica; University of Melbourne; Universitat Pompeu Fabra; Emory University; Institució Catalana de Recerca i Estudis Avançats; School of Medicine, Emory University; Institut National de la Santé et de la Recherche Médicale; St. Jude Children's Research Hospital","keywords":"Epigenomics; Computer science; Biology; Genetics","score_opus":0.02489598689835312,"score_gpt":0.3717977830730609,"score_spread":0.3469017961747078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4318828510","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010681507,0.0064713764,0.9739401,0.00017500464,0.00044502545,0.0003456356,0.00015903554,0.00002433496,0.017371384],"genre_scores_gemma":[0.00018002631,0.003811849,0.79768854,0.0009618459,0.00028470677,0.0001390064,0.0025866034,0.00018159935,0.19416581],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9982524,0.00033783386,0.0003843277,0.00068524707,0.000058390626,0.00028183157],"domain_scores_gemma":[0.9992615,0.0000668731,0.00013152917,0.00040505876,0.00006749416,0.00006754879],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00067585474,0.00028493613,0.00036850397,0.00018204971,0.000046924368,0.000017879383,0.00025722885,0.0007418492,0.000012397976],"category_scores_gemma":[0.000099319506,0.00031132184,0.00012746888,0.00008062672,0.00025605768,0.0000011267967,0.00015722035,0.0002865979,0.00001146112],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011923378,0.000062737214,0.00028439323,0.00014344913,0.00043283537,0.00003649098,0.00009874438,0.002690004,0.8299297,0.07330503,0.00566718,0.087230206],"study_design_scores_gemma":[0.0009975027,0.00031206638,0.00034996288,0.000057948037,0.000090461166,0.000042568925,0.00002307053,0.0009942224,0.016205788,0.29276118,0.68711203,0.0010532181],"about_ca_topic_score_codex":0.000008526697,"about_ca_topic_score_gemma":0.000015811574,"teacher_disagreement_score":0.8137239,"about_ca_system_score_codex":0.000059849397,"about_ca_system_score_gemma":0.00031112775,"threshold_uncertainty_score":0.9999339},"labels":[],"label_agreement":null},{"id":"W4320032954","doi":"10.1007/978-1-0716-2867-6_3","title":"3D Visualization of Microtubules in Epidermal Pavement Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Microtubule; Morphogenesis; Cytoskeleton; Software; Cell biology; Visualization; Biology; Computer science; Biological system; Cell; Artificial intelligence","score_opus":0.03221062248232636,"score_gpt":0.3507572812996755,"score_spread":0.3185466588173491,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320032954","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98544514,0.00023179248,0.013585922,0.000176318,0.00014982726,0.00018357905,0.000028424449,0.000023277711,0.00017570097],"genre_scores_gemma":[0.74228424,0.0010777804,0.2545619,0.001108229,0.000109686334,0.00007748468,0.0005144307,0.0000051308284,0.00026113042],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984484,0.0007291449,0.00030277806,0.00021880887,0.000047423666,0.00025345673],"domain_scores_gemma":[0.9994694,0.00036845816,0.00007598415,0.000045605586,0.000014206708,0.00002634071],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012017486,0.0000906015,0.0002116054,0.000057704903,0.00001683999,0.0000049634755,0.0001592166,0.00012686588,0.00011945659],"category_scores_gemma":[0.00007362429,0.0000410323,0.00004972129,0.0005656555,0.00003933014,0.000013771638,0.0000806696,0.00006628674,0.000011541134],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006220573,0.00002764696,0.008545999,0.0000064410947,0.000003748046,0.000012110458,0.000035972214,0.000058406364,0.95594496,0.0006213301,0.000016179496,0.034721013],"study_design_scores_gemma":[0.00010565738,0.00009685775,0.013273869,0.000016406222,0.000002807821,0.0000013659453,0.00004621086,0.0006707628,0.9796681,0.0027795995,0.0032297997,0.00010858738],"about_ca_topic_score_codex":0.0005388772,"about_ca_topic_score_gemma":0.00020818708,"teacher_disagreement_score":0.24316093,"about_ca_system_score_codex":0.000011304491,"about_ca_system_score_gemma":0.0000046990644,"threshold_uncertainty_score":0.16732487},"labels":[],"label_agreement":null},{"id":"W4320040904","doi":"10.1007/978-1-0716-2867-6","title":"The Plant Cytoskeleton","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Directorate for Biological Sciences; Leibniz-Institut für Pflanzenbiochemie; École Normale Supérieure de Lyon; State Key Laboratory of Plant Physiology and Biochemistry; China Agricultural University; Fujian Agriculture and Forestry University; Army Research Office; Durham University; Centre National de la Recherche Scientifique; University of St Andrews; McGill University; University of Exeter; Leibniz-Gemeinschaft; Universidade de Lisboa; Přírodovědecká Fakulta, Univerzita Karlova; Université Claude Bernard Lyon 1; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Univerzita Karlova v Praze","keywords":"Cytoskeleton; Cell biology; Biology; Genetics; Cell","score_opus":0.026509480859317466,"score_gpt":0.3543933857608309,"score_spread":0.3278839049015134,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320040904","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00044827836,0.0766943,0.699082,0.0023669126,0.006585721,0.0021198518,0.0006285711,0.00018837745,0.21188596],"genre_scores_gemma":[0.000011005378,0.0045303428,0.044689685,0.0004724445,0.0008838572,0.0001310746,0.005004406,0.00011197697,0.9441652],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99783933,0.00070311734,0.0003741878,0.0006046453,0.00008579429,0.00039292814],"domain_scores_gemma":[0.9989847,0.00012595444,0.00016356792,0.0006215743,0.000049159844,0.000055039895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010304303,0.00032636136,0.00033586856,0.000089440764,0.00012447957,0.000025101128,0.0004954265,0.0010564717,0.0000055433766],"category_scores_gemma":[0.00034507437,0.00022369329,0.00017876553,0.0000822065,0.00020360548,7.626559e-7,0.0002362029,0.00038799664,0.000041421685],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035116627,0.000008984016,0.000011912391,0.000017996017,0.00012486662,0.00004854176,0.00001460385,0.00002513565,0.9175242,0.0067554787,0.062836185,0.012596972],"study_design_scores_gemma":[0.00016165014,0.00012905606,0.0000052309065,0.000024546573,0.000024734503,0.000037061076,0.0000053128233,0.00001757989,0.13064289,0.0056032464,0.86307997,0.00026875746],"about_ca_topic_score_codex":0.00003081524,"about_ca_topic_score_gemma":0.00088513683,"teacher_disagreement_score":0.80024374,"about_ca_system_score_codex":0.00005191481,"about_ca_system_score_gemma":0.00035310717,"threshold_uncertainty_score":0.9121948},"labels":[],"label_agreement":null},{"id":"W4320489091","doi":"10.1007/978-1-0716-2978-9_23","title":"Offline Peptide Fractionation and Parallel Reaction Monitoring MS for the Quantitation of Low-Abundance Plasma Proteins","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; McGill University; Research Manitoba; Jewish General Hospital","funders":"","keywords":"Chemistry; Chromatography; Fractionation; Mass spectrometry; Context (archaeology); Peptide; Quantitative proteomics; Selected reaction monitoring; Standard curve; Quantitative analysis (chemistry); Blood proteins; Analytical Chemistry (journal); Tandem mass spectrometry; Proteomics; Biochemistry","score_opus":0.04128214952407488,"score_gpt":0.4317429159480339,"score_spread":0.390460766423959,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320489091","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13874191,0.000078008154,0.8604749,0.00022543586,0.000035983103,0.00031003088,0.000008316971,0.00004480193,0.00008062072],"genre_scores_gemma":[0.08069899,0.00021155183,0.91823304,0.0000067618366,0.000040303137,0.0006917066,0.000036910395,0.0000126867,0.00006807013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994018,0.000044638688,0.00022263362,0.00018192893,0.000037115315,0.000111876456],"domain_scores_gemma":[0.99908954,0.00052137073,0.00015757157,0.00016060556,0.000058729314,0.000012172414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065426435,0.00007038402,0.00010597388,0.000057915688,0.000064331725,0.000004418456,0.00008045873,0.000107949054,0.0000018498532],"category_scores_gemma":[0.00041302963,0.000061538856,0.000032742395,0.00015895131,0.000054894725,0.000029472869,0.000030055706,0.000117201525,4.034714e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035109926,0.00001227637,0.00058820995,0.000043528064,0.0000088271745,1.8897312e-7,0.000034999404,0.0004561817,0.9678895,0.009736809,0.0000018967216,0.021192463],"study_design_scores_gemma":[0.00019887436,0.000022891816,0.00083054346,0.000025429825,0.0000072004714,0.0000016466091,0.00008678888,0.008352969,0.94685036,0.041998763,0.001559247,0.00006527197],"about_ca_topic_score_codex":0.000034236356,"about_ca_topic_score_gemma":0.0000070482465,"teacher_disagreement_score":0.05804292,"about_ca_system_score_codex":0.000030152061,"about_ca_system_score_gemma":0.000011213485,"threshold_uncertainty_score":0.25094816},"labels":[],"label_agreement":null},{"id":"W4320489218","doi":"10.1007/978-1-0716-2978-9_32","title":"Bioinformatics Tools and Knowledgebases to Assist Generating Targeted Assays for Plasma Proteomics","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; University of Victoria","funders":"","keywords":"Proteomics; Proteome; Computer science; Computational biology; Human proteome project; Bioinformatics; Biology","score_opus":0.04399106683932834,"score_gpt":0.41253661950259535,"score_spread":0.368545552663267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320489218","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05772287,0.000038200775,0.9406213,0.00019685077,0.000029452698,0.00056757877,0.00014464898,0.00015689159,0.00052218826],"genre_scores_gemma":[0.00097200106,0.000020788439,0.9967238,0.0001501809,0.000037802303,0.0017730562,0.00018221914,0.000028134282,0.000112046335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989735,0.00006643398,0.00034777008,0.00028298114,0.000031926127,0.00029739898],"domain_scores_gemma":[0.99914217,0.00037000328,0.00009539227,0.00027237184,0.0000564854,0.00006357688],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006525228,0.0001515218,0.00023578524,0.0001178252,0.000096632124,0.000029376868,0.00017473151,0.00019593963,0.000008892983],"category_scores_gemma":[0.0012430919,0.00015073764,0.000050480285,0.00028516297,0.000054853073,0.000029581164,0.00017718009,0.00015033214,0.000004004386],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001034874,0.000010950124,0.00023773011,0.00005907622,0.000009431198,9.839451e-7,0.000055692246,0.00019109323,0.913818,0.006281993,0.00005102033,0.07927368],"study_design_scores_gemma":[0.00022427212,0.000040431707,0.000010764666,0.000020378542,0.000007072364,0.0000036765707,0.00005060189,0.05875978,0.91876924,0.015543861,0.0063814567,0.0001884444],"about_ca_topic_score_codex":0.0000033573444,"about_ca_topic_score_gemma":0.000003629217,"teacher_disagreement_score":0.07908523,"about_ca_system_score_codex":0.000043229,"about_ca_system_score_gemma":0.00003178928,"threshold_uncertainty_score":0.6146903},"labels":[],"label_agreement":null},{"id":"W4320489390","doi":"10.1007/978-1-0716-2978-9_27","title":"Absolute Quantitative Targeted Proteomics Assays for Plasma Proteins","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Jewish General Hospital; University of Victoria","funders":"","keywords":"Proteomics; Quantitative proteomics; Blood proteins; Chemistry; Selected reaction monitoring; Mass spectrometry; Computational biology; Biomarker discovery; Chromatography; Bioinformatics; Tandem mass spectrometry; Biology; Biochemistry","score_opus":0.04474488212987578,"score_gpt":0.43475020027869155,"score_spread":0.3900053181488158,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320489390","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.01897217,0.000043415144,0.9777941,0.00034634265,0.000035391946,0.0014148271,0.000118291464,0.00028379922,0.0009916249],"genre_scores_gemma":[0.0009895883,0.000032927666,0.9901608,0.00006703507,0.000024565994,0.008190866,0.00017948824,0.000047538153,0.00030717388],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861735,0.00013610946,0.0003366736,0.00046370688,0.000045160024,0.00040099205],"domain_scores_gemma":[0.99903864,0.00032093746,0.00014393817,0.00038085465,0.000068753034,0.000046859157],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008083024,0.00017951755,0.00027910128,0.00013006908,0.000080544305,0.000010454945,0.00030039312,0.00029216343,0.000028469349],"category_scores_gemma":[0.0007516587,0.0001814821,0.000106919615,0.00037792532,0.00010939803,0.000022762611,0.00012871172,0.00026416048,0.000011133862],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040045332,0.000024663714,0.00004894069,0.00004147519,0.000019620102,0.0000034230645,0.00004288318,0.00011569526,0.9197058,0.073048875,0.000034084453,0.006874499],"study_design_scores_gemma":[0.0003040344,0.000056909437,0.000006241766,0.000013702546,0.000006367119,0.0000020909417,0.00003405183,0.012678375,0.78679705,0.19066802,0.009255851,0.00017732347],"about_ca_topic_score_codex":0.000014167063,"about_ca_topic_score_gemma":0.0000050113013,"teacher_disagreement_score":0.13290875,"about_ca_system_score_codex":0.00006212426,"about_ca_system_score_gemma":0.000045590106,"threshold_uncertainty_score":0.74006253},"labels":[],"label_agreement":null},{"id":"W4320709489","doi":"10.1007/978-1-0716-2996-3_12","title":"Finding Rearrangements in Nanopore DNA Reads with LAST and dnarrange","year":2022,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada)","funders":"","keywords":"Biology; Pseudogene; Nanopore sequencing; Genome; Genetics; DNA sequencing; Computational biology; Reference genome; Sequence (biology); DNA; Evolutionary biology; Gene","score_opus":0.020223382222099767,"score_gpt":0.33767670058491933,"score_spread":0.31745331836281954,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320709489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98251957,0.0021273273,0.0138590075,0.00018321353,0.00013044577,0.00025045665,0.000018790048,0.0000029685368,0.00090825104],"genre_scores_gemma":[0.85412693,0.00021385457,0.1448175,0.00042021886,0.00003207308,0.00019739426,0.000053910553,0.000031820444,0.00010627433],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998299,0.00064168696,0.00020934784,0.0004803406,0.000060437756,0.00030918408],"domain_scores_gemma":[0.9995917,0.000027614102,0.00006733675,0.00025929164,0.000017225208,0.000036853864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00079177675,0.00016657804,0.0002299475,0.00013449675,0.00008853157,0.00000659986,0.00017592633,0.00009101138,0.000014131555],"category_scores_gemma":[0.00006202931,0.0001433561,0.000034435267,0.00019512366,0.00011466619,4.9259785e-7,0.00042190126,0.00017104925,2.8463927e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008480562,0.000038224884,0.09588045,0.000008906698,0.00003885044,0.000026990014,0.00016544797,0.00010068406,0.89644986,0.00021771228,0.00001956726,0.006968486],"study_design_scores_gemma":[0.0074106017,0.0046864613,0.15572439,0.0000419402,0.00008222487,0.00028928785,0.0026883986,0.00018071853,0.6620418,0.005683617,0.15941791,0.0017526936],"about_ca_topic_score_codex":0.00005738833,"about_ca_topic_score_gemma":0.00016217765,"teacher_disagreement_score":0.23440813,"about_ca_system_score_codex":0.00002451557,"about_ca_system_score_gemma":0.000032769934,"threshold_uncertainty_score":0.5845892},"labels":[],"label_agreement":null},{"id":"W4320857030","doi":"10.1007/7651_2022_465","title":"Inferring Gene Regulatory Networks and Predicting the Effect of Gene Perturbations via IQCELL","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Gene regulatory network; Computational biology; Gene; Boolean network; Computer science; Data mining; Biology; Boolean function; Theoretical computer science; Genetics; Gene expression; Algorithm","score_opus":0.009112959948269148,"score_gpt":0.3147128918060493,"score_spread":0.3055999318577801,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4320857030","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57741386,0.003006823,0.41918784,0.00004324274,0.00010959333,0.000174899,0.000002348474,0.00001605779,0.000045324156],"genre_scores_gemma":[0.9313262,0.0002910253,0.06781069,0.00008811893,0.00017100912,0.00007620698,0.000116662006,0.000042139684,0.000077950026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969187,0.0017659587,0.00038723243,0.00047876328,0.000081515514,0.00036784564],"domain_scores_gemma":[0.9988719,0.00024318794,0.00015571521,0.0006225618,0.00004563548,0.000060965936],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024520124,0.00021910743,0.00034890661,0.00015997111,0.00010106923,0.000009219862,0.00026628815,0.00031518075,0.000004431964],"category_scores_gemma":[0.00033562738,0.00017045092,0.00015937416,0.00053229375,0.00025379652,0.0000022105728,0.00029354426,0.0001771539,9.230022e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020371408,0.000005578424,0.03995802,0.000010796491,0.00011382723,0.0000036809695,0.000029492172,0.030052973,0.91664815,0.000032972475,0.000021573283,0.013102575],"study_design_scores_gemma":[0.00041162374,0.0002568948,0.01763321,0.000011460746,0.00010364941,0.000022702625,0.000017344842,0.051664438,0.92892754,0.0002649539,0.0004894469,0.00019672465],"about_ca_topic_score_codex":0.000021216509,"about_ca_topic_score_gemma":0.000011400059,"teacher_disagreement_score":0.35391235,"about_ca_system_score_codex":0.000014772136,"about_ca_system_score_gemma":0.000022574057,"threshold_uncertainty_score":0.6950787},"labels":[],"label_agreement":null},{"id":"W4321478681","doi":"10.1007/978-1-0716-2922-2_12","title":"Identification of Proximity Interactors of Mammalian Nucleoid Proteins by BioID","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; Montreal Neurological Institute and Hospital; McGill University","funders":"","keywords":"Biotinylation; Nucleoid; Biotin; Biology; DNA ligase; Proteomics; Computational biology; Biochemistry; Molecular biology; Cell biology; DNA; Gene; Escherichia coli","score_opus":0.013995326341598124,"score_gpt":0.36411104988419135,"score_spread":0.35011572354259324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321478681","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83256626,0.0012583303,0.1648752,0.0002377873,0.0002823609,0.0004257544,0.000059283706,0.000019151874,0.00027587364],"genre_scores_gemma":[0.9146376,0.000469759,0.08421593,0.000058073183,0.00002467261,0.000052537773,0.00015369526,0.000028286802,0.00035939502],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983071,0.0005798206,0.0004947988,0.00034194923,0.00005963561,0.00021665933],"domain_scores_gemma":[0.99932504,0.000027311919,0.00020245364,0.00033471198,0.00008083165,0.000029645498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00093417516,0.0001396093,0.0002653425,0.00014586451,0.000024490919,0.0000030213157,0.00023419742,0.00033629674,0.0000068770623],"category_scores_gemma":[0.0004607216,0.00012286214,0.00011137334,0.00037370174,0.00026990403,0.0000020920752,0.0001890222,0.00013383354,0.000003191387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039219034,0.00007060819,0.0025892018,0.00006641169,0.000070744296,0.0000013086587,0.000077530574,0.000008583827,0.9924004,0.00030145713,0.00016279735,0.004211735],"study_design_scores_gemma":[0.00026600034,0.0002182888,0.0011655051,0.000016439173,0.0000128039355,0.0000019320728,0.00009419694,0.00006412326,0.99543047,0.00059778825,0.0020126118,0.00011983962],"about_ca_topic_score_codex":0.00003435893,"about_ca_topic_score_gemma":0.0000075853177,"teacher_disagreement_score":0.082071394,"about_ca_system_score_codex":0.000008785787,"about_ca_system_score_gemma":0.00002523992,"threshold_uncertainty_score":0.5010173},"labels":[],"label_agreement":null},{"id":"W4321478803","doi":"10.1007/978-1-0716-2899-7_3","title":"Universal NicE-Seq: A Simple and Quick Method for Accessible Chromatin Detection in Fixed Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"National Human Genome Research Institute","keywords":"Chromatin; DNA; Nick translation; Molecular biology; Biology; Nucleosome; Computational biology; DNA sequencing; Genetics","score_opus":0.014543000056861672,"score_gpt":0.3656741055058117,"score_spread":0.35113110544895004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4321478803","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40916005,0.00014491074,0.59015256,0.000053767715,0.00010813638,0.00026827017,0.00002058612,0.000014153895,0.00007759991],"genre_scores_gemma":[0.114851296,0.00018389676,0.88428164,0.00018340001,0.00004687624,0.00011784006,0.00017549911,0.00004376925,0.000115775714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99807644,0.0006343241,0.0003210328,0.0005342016,0.00003943415,0.0003945963],"domain_scores_gemma":[0.9993634,0.00014287628,0.00010729657,0.0002953445,0.00003570951,0.00005537102],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013916664,0.00018915322,0.00028629586,0.00023402313,0.000051145067,0.000018578126,0.00021554292,0.00035271127,0.0000055454193],"category_scores_gemma":[0.0002437539,0.00020087573,0.00008232785,0.00035972171,0.0000652718,0.0000035580524,0.00024416315,0.00012684366,0.0000018878151],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052330968,0.000021224401,0.00056722434,0.000039654304,0.000022877353,0.0000046037653,0.000054082368,0.0007086071,0.9749345,0.00027756795,0.000026223466,0.02329107],"study_design_scores_gemma":[0.0011894351,0.00031524364,0.0009508522,0.000008553459,0.000014509937,0.000008669856,0.00015336223,0.04461479,0.9403695,0.007695117,0.00441305,0.000266955],"about_ca_topic_score_codex":0.00016323864,"about_ca_topic_score_gemma":0.00038544784,"teacher_disagreement_score":0.29430875,"about_ca_system_score_codex":0.0000375082,"about_ca_system_score_gemma":0.0000565096,"threshold_uncertainty_score":0.81914747},"labels":[],"label_agreement":null},{"id":"W4322153465","doi":"10.1007/978-1-0716-3060-0_16","title":"Archaella Isolation","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Sulfolobus acidocaldarius; Isolation (microbiology); Archaea; Protein filament; Methanococcus; Biology; Extraction (chemistry); Chemistry; Microbiology; Chromatography; Bacteria; Biochemistry; Genetics","score_opus":0.035149006921207405,"score_gpt":0.45022617487935424,"score_spread":0.4150771679581468,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322153465","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19391325,0.0010174186,0.7993851,0.00050722156,0.0002192582,0.00028356595,0.0000063509983,0.00005203256,0.0046157977],"genre_scores_gemma":[0.11009184,0.0009924623,0.8859779,0.0006552412,0.000177793,0.00023664512,0.00017972139,0.000057245634,0.0016311025],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786377,0.0009997443,0.00020528672,0.00042691064,0.000072771254,0.00043150666],"domain_scores_gemma":[0.999404,0.00008903271,0.000041622017,0.00035671843,0.000055188826,0.000053442847],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001443642,0.0001409626,0.00018047086,0.00018663505,0.000049268026,0.0000077702825,0.00023740582,0.00019218258,0.000012385692],"category_scores_gemma":[0.0012084701,0.0001359375,0.000078919395,0.0005237948,0.0001659827,0.0000012407464,0.00041641746,0.00015666177,0.000028050117],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027323807,0.000015368098,0.007040298,0.0000091459715,0.000031138814,0.000011972023,0.00003389041,0.00008959866,0.9797509,0.0016708453,0.00020405451,0.01111548],"study_design_scores_gemma":[0.00096462877,0.0005956391,0.011172494,0.000014790019,0.000011364951,0.000012642659,0.00014486407,0.0031024807,0.82791424,0.017964238,0.13758871,0.00051392347],"about_ca_topic_score_codex":0.000020933634,"about_ca_topic_score_gemma":0.000024464018,"teacher_disagreement_score":0.15183666,"about_ca_system_score_codex":0.000015617245,"about_ca_system_score_gemma":0.000048905717,"threshold_uncertainty_score":0.554337},"labels":[],"label_agreement":null},{"id":"W4322703910","doi":"10.1007/978-1-0716-2899-7","title":"Chromatin Accessibility","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Gender Studies in Language","field":"Social Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"School of Medicine, Stanford University; Faculty of Health and Medical Sciences, University of Western Australia; Det Sundhedsvidenskabelige Fakultet, Københavns Universitet; Uppsala Universitet; Memorial University of Newfoundland; University of California, San Diego; Technische Universität München; Novo Nordisk","keywords":"Chromatin; Computational biology; Biology; Genetics; DNA","score_opus":0.0733898834220788,"score_gpt":0.5114771100226453,"score_spread":0.4380872266005665,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4322703910","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000036156285,0.0019756688,0.18732865,0.00034953246,0.0019457653,0.0005091511,0.00002188331,0.00020021976,0.807633],"genre_scores_gemma":[0.000038428323,0.00024894415,0.5269811,0.0003672683,0.00032584005,0.00010390457,0.000047693935,0.000062574836,0.47182423],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9934839,0.004439453,0.00048109272,0.00076343893,0.0002076686,0.0006244529],"domain_scores_gemma":[0.997862,0.0010999904,0.00022308866,0.0006685545,0.00006888833,0.000077493954],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0063802814,0.00028211295,0.000674843,0.00025242407,0.0001774808,0.000025741363,0.0009857278,0.0009937804,0.0003652075],"category_scores_gemma":[0.004457392,0.0002837731,0.00019296558,0.00035748823,0.00097272824,0.000019989406,0.00064310816,0.00063969695,0.00012117634],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029216557,0.00014072367,0.0014814863,0.00044575243,0.0006324831,0.0008682064,0.040950228,0.0000102489885,0.018005252,0.55017465,0.032602627,0.3546591],"study_design_scores_gemma":[0.00021164045,0.000047714188,0.000262735,0.0000652948,0.00004180282,0.0000011380358,0.0011092011,0.00000578691,0.0005434272,0.62128067,0.37588623,0.0005443591],"about_ca_topic_score_codex":0.00039992493,"about_ca_topic_score_gemma":0.0013386798,"teacher_disagreement_score":0.35411474,"about_ca_system_score_codex":0.00053960463,"about_ca_system_score_gemma":0.00060632365,"threshold_uncertainty_score":0.99996144},"labels":[],"label_agreement":null},{"id":"W4323348286","doi":"10.1007/978-1-0716-3012-9_15","title":"Rapid Testing of Gene Function in Axonal Regeneration After Spinal Cord Injury Using Larval Zebrafish","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council; Wellcome Trust","keywords":"Zebrafish; Regeneration (biology); Spinal cord injury; Spinal cord; Neuroscience; Biology; Larva; Function (biology); Anatomy; Gene; Cell biology; Genetics; Ecology","score_opus":0.06181088891667906,"score_gpt":0.4273813184789951,"score_spread":0.365570429562316,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4323348286","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57423127,0.00037980854,0.42487878,0.000100378165,0.00009278594,0.0002242638,0.000020275002,0.000012664942,0.000059777434],"genre_scores_gemma":[0.43357873,0.00006769689,0.56546485,0.00027149924,0.00014049943,0.0001886382,0.0002360364,0.000030681607,0.00002137264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99755806,0.00088323356,0.0004694993,0.00051896006,0.00014804439,0.0004221911],"domain_scores_gemma":[0.9992405,0.00007665084,0.000112360525,0.0003660224,0.00012092224,0.00008352231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001937245,0.00015976555,0.0002396907,0.00038330787,0.000034862926,0.000009869503,0.00021940653,0.00033117537,0.000023247909],"category_scores_gemma":[0.0016809171,0.00016743955,0.00007669973,0.0011210771,0.0002287565,0.0000050380036,0.00020995227,0.00022307788,0.0000050414596],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005765163,0.000049337243,0.003688724,0.000017981833,0.000018690213,0.0000103969705,0.0000037352513,0.00005817932,0.91833204,0.00012014674,0.000028458215,0.07709577],"study_design_scores_gemma":[0.0005120979,0.0014696795,0.013554684,0.000028827728,0.000011709485,0.000011973105,0.000019409,0.0030843013,0.97600555,0.0023210135,0.0027758975,0.0002048437],"about_ca_topic_score_codex":0.000059109876,"about_ca_topic_score_gemma":0.000028698289,"teacher_disagreement_score":0.14065254,"about_ca_system_score_codex":0.000042818072,"about_ca_system_score_gemma":0.00016629767,"threshold_uncertainty_score":0.6827986},"labels":[],"label_agreement":null},{"id":"W4328049308","doi":"10.1007/978-1-0716-2124-0_25","title":"Correction to: DIA Proteomics and Machine Learning for the Fast Identification of Bacterial Species in Biological Samples","year":2023,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Identification (biology); Computer science; Artificial intelligence; Natural language processing; Biology; Ecology","score_opus":0.04376330844276322,"score_gpt":0.3582660544715035,"score_spread":0.3145027460287403,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4328049308","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027451077,0.0063532772,0.947813,0.00032209893,0.015980015,0.0016372433,0.00021645016,0.0000170048,0.00020988092],"genre_scores_gemma":[0.05036143,0.075450726,0.8032466,0.00049381226,0.0044556796,0.004086259,0.011907792,0.00042367855,0.049574032],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99760824,0.00078982324,0.00059081987,0.00063943263,0.00005705335,0.00031465196],"domain_scores_gemma":[0.99891096,0.0003634081,0.0003082542,0.00030445194,0.00008200589,0.000030908996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020223267,0.00027401416,0.00058286986,0.0002755274,0.00007227833,0.000021914302,0.00028221938,0.0005084793,0.000005585109],"category_scores_gemma":[0.0054190243,0.00020850911,0.00013253353,0.00029877914,0.00020344667,0.00000149991,0.000385708,0.00042757083,5.5082523e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000160702,0.000024776062,0.001350105,0.000040432817,0.00008932849,7.645761e-7,0.00005664687,0.000054882465,0.98812264,0.0003235181,0.0029105511,0.006865646],"study_design_scores_gemma":[0.00091965887,0.0011940934,0.019988462,0.00007174497,0.000083838335,0.000008846795,0.00029825326,0.0008978268,0.6190043,0.0020415022,0.35486183,0.0006296374],"about_ca_topic_score_codex":0.00010577585,"about_ca_topic_score_gemma":0.00047895737,"teacher_disagreement_score":0.36911833,"about_ca_system_score_codex":0.000027385491,"about_ca_system_score_gemma":0.000055831322,"threshold_uncertainty_score":0.85027546},"labels":[],"label_agreement":null},{"id":"W43342070","doi":"10.1007/978-1-60761-938-3_3","title":"Morphology and Properties of Astrocytes","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neuroinflammation and Neurodegeneration Mechanisms","field":"Neuroscience","cited_by":54,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Synaptogenesis; Astrocyte; Neuroscience; Biology; Central nervous system","score_opus":0.11535576160038585,"score_gpt":0.4190109721783577,"score_spread":0.30365521057797185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W43342070","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0006222127,0.90337765,0.094705015,0.000028617955,0.0004937849,0.000587776,0.000011840701,0.000036935373,0.0001361785],"genre_scores_gemma":[0.000010535762,0.8241811,0.17543544,0.00017623926,0.000021122134,0.000079012236,0.000003337902,0.00003263289,0.000060624807],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9949481,0.0035179146,0.0006343211,0.00060932734,0.000065167485,0.00022516062],"domain_scores_gemma":[0.9988738,0.0003423482,0.00034400355,0.0003710237,0.000021736047,0.000047107158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006071515,0.0002791809,0.0010728786,0.00038748578,0.000032466927,0.000012640541,0.00031062198,0.00042735273,0.0000257622],"category_scores_gemma":[0.0017704484,0.00021519962,0.0001372358,0.00026098345,0.0003048939,0.000022651186,0.00018864538,0.00056215504,0.000006866736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000021888507,0.000010002092,1.7511903e-7,0.00043812642,0.0000015984763,0.000012335207,0.000006956974,2.5955458e-7,0.6722026,0.009203426,5.7524494e-7,0.31812173],"study_design_scores_gemma":[0.000086847234,0.0000652585,5.8796093e-8,0.00018438631,0.000025996278,0.00015321565,8.4117966e-7,0.000014728531,0.7647791,0.00044886203,0.2341067,0.00013399137],"about_ca_topic_score_codex":0.0000015358847,"about_ca_topic_score_gemma":9.588335e-7,"teacher_disagreement_score":0.31798774,"about_ca_system_score_codex":0.000008150727,"about_ca_system_score_gemma":0.00007746374,"threshold_uncertainty_score":0.8775586},"labels":[],"label_agreement":null},{"id":"W4352977369","doi":"10.1007/978-1-0716-3044-0_22","title":"Analysis of Small Non-coding RNAs as Signaling Intermediates of Environmentally Integrated Responses to Abiotic Stress","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; Institut National de la Recherche Scientifique","funders":"","keywords":"Biology; Abiotic component; Computational biology; Abiotic stress; Context (archaeology); Genetics; Gene; Ecology","score_opus":0.03976860697379467,"score_gpt":0.37020262102410284,"score_spread":0.33043401405030814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4352977369","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9743727,0.00007870917,0.024811992,0.000196903,0.000052111165,0.00024275984,0.00017287594,0.000021583146,0.000050366045],"genre_scores_gemma":[0.9632074,0.00006195575,0.03615296,0.00011953711,0.000010357526,0.00002554698,0.00036961865,0.0000025810266,0.00005000871],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99658376,0.0018931935,0.0005068761,0.00047234955,0.00011897194,0.0004248494],"domain_scores_gemma":[0.9979333,0.0016289519,0.00015421123,0.000140329,0.00005197089,0.00009118977],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021116443,0.00018181799,0.0006069023,0.00045189055,0.00003626657,0.000008807732,0.0005848833,0.00024254441,0.0001168389],"category_scores_gemma":[0.0014063984,0.00008880042,0.00021286093,0.002665512,0.00024303579,0.000013011886,0.00037076394,0.00020093967,0.00001199539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001338581,0.000050795505,0.07562988,0.0000085127185,0.00024306844,0.000043945518,0.0001315888,0.00018380473,0.90367347,0.00005219211,0.0000011900928,0.019847717],"study_design_scores_gemma":[0.00010234529,0.0005280483,0.10203575,0.000039474162,0.00008036405,0.000002659952,0.00035483867,0.0011796781,0.8951785,0.0002662945,0.00008010679,0.00015192475],"about_ca_topic_score_codex":0.0004981739,"about_ca_topic_score_gemma":0.00029416455,"teacher_disagreement_score":0.026405869,"about_ca_system_score_codex":0.000033056633,"about_ca_system_score_gemma":0.00001878105,"threshold_uncertainty_score":0.36211762},"labels":[],"label_agreement":null},{"id":"W4360599590","doi":"10.1007/978-1-0716-3048-8_33","title":"Manipulation and Visualization of Peroxisomes in Drosophila","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Drosophila (subgenus); Visualization; Peroxisome; Computational biology; Biology; Evolutionary biology; Computer science; Cell biology; Genetics; Artificial intelligence; Gene","score_opus":0.026844331510554077,"score_gpt":0.39713357289764833,"score_spread":0.37028924138709424,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4360599590","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7824618,0.00047252732,0.21639386,0.000115179675,0.0000888683,0.0001763941,0.0000025024128,0.000011107619,0.00027771248],"genre_scores_gemma":[0.9209011,0.0002785597,0.07836958,0.00012182895,0.000027740653,0.00003265613,0.00017885747,0.000016352882,0.000073328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890083,0.00044476765,0.0002443735,0.0002387549,0.000038459206,0.00013281977],"domain_scores_gemma":[0.99972326,0.00002309592,0.000063558226,0.00014503162,0.00002505676,0.000019987749],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00068197807,0.000083249965,0.00013840741,0.0002421468,0.000012185219,0.000003651094,0.00006943655,0.00017111812,0.000004772501],"category_scores_gemma":[0.00035782132,0.00008515678,0.000028357315,0.00034690322,0.00007031402,0.0000025543975,0.00008422282,0.00004672331,0.0000010886228],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015477759,0.000014953316,0.025146382,0.000013031486,0.0000046371324,0.0000016357614,0.000033383098,0.000071013244,0.9636908,0.0055729738,0.000011181276,0.0054245223],"study_design_scores_gemma":[0.00048420293,0.00014584513,0.02582441,0.000014098122,0.000002748717,0.0000030881529,0.000042975393,0.0012414895,0.96325266,0.0076096067,0.0012575798,0.000121285055],"about_ca_topic_score_codex":0.000018810595,"about_ca_topic_score_gemma":0.000014090672,"teacher_disagreement_score":0.13843925,"about_ca_system_score_codex":0.000007467935,"about_ca_system_score_gemma":0.000015864282,"threshold_uncertainty_score":0.34725928},"labels":[],"label_agreement":null},{"id":"W4360779909","doi":"10.1007/978-1-0716-3048-8","title":"Peroxisomes","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Peroxisome Proliferator-Activated Receptors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Medicine and Dentistry, University of Alberta; Indian Institute of Technology Indore; Universidade do Porto; KU Leuven; Universiteit van Amsterdam; Universität Wien; University of Exeter; Rijksuniversiteit Groningen; Amsterdam University Medical Centers; International Business Machines Corporation; Deutsches Zentrum für Herz-Kreislaufforschung; Kalinga Institute of Industrial Technology; Universidade de Aveiro; Universität Bielefeld; Medizinische Universität Wien; University of Alberta","keywords":"Peroxisome; Chemistry; Computational biology; Biology; Biochemistry; Gene","score_opus":0.021823049052176698,"score_gpt":0.37748683104298286,"score_spread":0.35566378199080617,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4360779909","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.004904954,0.020760883,0.59051144,0.00062364194,0.006900613,0.0026605132,0.000421909,0.0005274165,0.3726886],"genre_scores_gemma":[0.00010769176,0.001740143,0.29764986,0.0010118642,0.0008242899,0.00031924673,0.0021261768,0.00040689477,0.69581383],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99573326,0.0012615967,0.00067102915,0.0013874343,0.00015799349,0.0007886784],"domain_scores_gemma":[0.9982605,0.00012357933,0.0002697754,0.0010820451,0.00010791995,0.00015618134],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012438982,0.0007131154,0.0008699532,0.00053176604,0.000060169117,0.000025888634,0.00081251166,0.002369162,0.00010381305],"category_scores_gemma":[0.00084955274,0.00072142883,0.00039611035,0.00026748318,0.0003586843,0.000002316869,0.00068656745,0.00088580017,0.00015227444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052784024,0.00003743981,0.00020644072,0.000055348337,0.00024829956,0.00004725257,0.000018351131,0.000021361835,0.9798298,0.0023403259,0.0073353215,0.009807296],"study_design_scores_gemma":[0.00045531703,0.00030902814,0.000010841369,0.00005641611,0.000035024234,0.000024368373,0.000011351483,0.0000098012315,0.54780376,0.010426227,0.44012418,0.0007337002],"about_ca_topic_score_codex":0.00000822375,"about_ca_topic_score_gemma":0.000015985377,"teacher_disagreement_score":0.43278885,"about_ca_system_score_codex":0.00015550667,"about_ca_system_score_gemma":0.0005579773,"threshold_uncertainty_score":0.9995237},"labels":[],"label_agreement":null},{"id":"W4361301678","doi":"10.1007/978-1-0716-3036-5_22","title":"Exons 45–55 Skipping Using Antisense Oligonucleotides in Immortalized Human DMD Muscle Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Exon skipping; Duchenne muscular dystrophy; Exon; Dystrophin; RNA splicing; Muscular dystrophy; Biology; mdx mouse; Oligonucleotide; Alternative splicing; Computational biology; Bioinformatics; Molecular biology; Genetics; Gene; RNA","score_opus":0.03735068169211415,"score_gpt":0.41694600473801186,"score_spread":0.3795953230458977,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361301678","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9391744,0.00051376456,0.05897677,0.000054281787,0.00030235088,0.00027989325,0.000011744888,0.00004171355,0.000645053],"genre_scores_gemma":[0.85557055,0.00023417114,0.14322358,0.0005299772,0.0000766173,0.000051667546,0.00018313552,0.00006314441,0.00006716247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964266,0.0015315318,0.0004994024,0.0007706227,0.00006341186,0.00070843654],"domain_scores_gemma":[0.99911606,0.00008026729,0.00012357267,0.00055884506,0.000037425976,0.00008383791],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012416707,0.0002982604,0.00045041414,0.00038603376,0.000109350876,0.000013494736,0.00032836167,0.00048002912,0.00004298451],"category_scores_gemma":[0.00030898704,0.00032171153,0.00018044258,0.00061131944,0.0003012954,0.00000518267,0.00033369547,0.0002668218,0.000017493976],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046661127,0.00006960187,0.0028710503,0.000023317425,0.000036979567,0.00006687633,0.00006784687,0.0011279094,0.99265397,0.0006120792,0.000049283706,0.002374418],"study_design_scores_gemma":[0.0015428165,0.00018901346,0.011296982,0.000037479,0.000022881359,0.000009130638,0.00024557422,0.0010642399,0.9757773,0.007074223,0.0021656542,0.00057466625],"about_ca_topic_score_codex":0.00025274727,"about_ca_topic_score_gemma":0.00014439634,"teacher_disagreement_score":0.084246814,"about_ca_system_score_codex":0.000023628276,"about_ca_system_score_gemma":0.00006415279,"threshold_uncertainty_score":0.99992347},"labels":[],"label_agreement":null},{"id":"W4361301890","doi":"10.1007/978-1-0716-3036-5_23","title":"In Vivo Evaluation of Exon 51 Skipping in hDMD/Dmd-null Mice","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Exon skipping; Exon; Duchenne muscular dystrophy; Dystrophin; In vivo; Translation (biology); mdx mouse; Null (SQL); Sequence (biology); Biology; Open reading frame; Genetics; Medicine; Bioinformatics; Computational biology; Gene; Alternative splicing; Messenger RNA; Peptide sequence; Computer science","score_opus":0.038983713485359214,"score_gpt":0.4366530934124392,"score_spread":0.39766937992707996,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361301890","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9688091,0.00095952326,0.027979117,0.0001571445,0.00022903134,0.00033576402,0.00000638769,0.000008512522,0.0015153714],"genre_scores_gemma":[0.96011287,0.00023065193,0.038858008,0.00045064793,0.000037986414,0.00014329849,0.0000885207,0.000024045023,0.000053961627],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962029,0.0023955628,0.00043905506,0.0005041705,0.00009076383,0.00036754145],"domain_scores_gemma":[0.9993521,0.000101413265,0.00010997131,0.00034056016,0.00006611491,0.000029863031],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0035980034,0.00016546909,0.00031128508,0.00038101163,0.000016532042,0.0000025338022,0.00023527707,0.0003993195,0.00004686978],"category_scores_gemma":[0.0010971593,0.00017668803,0.000083468025,0.00060743705,0.00013271954,0.000003936714,0.00016295478,0.00017708506,0.0000049139726],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000985417,0.000064075015,0.004936853,0.000022031409,0.0000168358,0.000005968724,0.00010777848,0.0021619175,0.98486936,0.00043347906,0.000054877462,0.0072282767],"study_design_scores_gemma":[0.0018832131,0.00025383016,0.011760856,0.00003178485,0.000016287286,0.000003457878,0.00023514577,0.002936459,0.9628975,0.018356225,0.0013540912,0.0002711968],"about_ca_topic_score_codex":0.00018545592,"about_ca_topic_score_gemma":0.0003047204,"teacher_disagreement_score":0.021971911,"about_ca_system_score_codex":0.000030027477,"about_ca_system_score_gemma":0.000100806115,"threshold_uncertainty_score":0.72051287},"labels":[],"label_agreement":null},{"id":"W4361303133","doi":"10.1007/978-1-0716-2990-1_3","title":"Genetic and Molecular Quality Control of Genetically Engineered Mice","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Toronto Centre for Phenogenomics; Hospital for Sick Children","funders":"","keywords":"Allele; Genetically modified organism; Biology; Genetically engineered; Transgene; Genetics; Phenotype; Computational biology; Disease; Human disease; Gene; Function (biology); Medicine; Pathology","score_opus":0.013881420057596922,"score_gpt":0.41366662933987774,"score_spread":0.39978520928228084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361303133","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3937691,0.0024497253,0.60332596,0.000073497526,0.00009431406,0.00016202917,0.000013718963,0.000016819458,0.00009483341],"genre_scores_gemma":[0.6417494,0.00025392286,0.357678,0.00017294458,0.000029498555,0.000037692836,0.000025747344,0.000031286778,0.000021533006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978682,0.0006293964,0.0004913861,0.00051533344,0.00008629578,0.00040943257],"domain_scores_gemma":[0.99919075,0.00012294784,0.00007548097,0.00044527985,0.00006700702,0.00009854609],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010181076,0.00022923299,0.00038955954,0.0001846392,0.000018918754,0.000007141898,0.00023434406,0.0003032496,0.000008521262],"category_scores_gemma":[0.0006873796,0.00024114091,0.00011481212,0.00031097396,0.00016245115,0.0000011112468,0.0001681781,0.00013277796,0.0000025196123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034920417,0.000020667469,0.0027450302,0.000048517177,0.00006693803,0.000014930606,0.000025820964,0.0028832885,0.9833054,0.00087676605,0.0000113275055,0.009966388],"study_design_scores_gemma":[0.0010746296,0.00024634722,0.015362756,0.000012032643,0.000030195528,0.000018324803,0.000029184182,0.0024943366,0.9772119,0.0016527494,0.0015557858,0.00031175188],"about_ca_topic_score_codex":0.00002451897,"about_ca_topic_score_gemma":0.0000060351736,"teacher_disagreement_score":0.24798031,"about_ca_system_score_codex":0.000007662014,"about_ca_system_score_gemma":0.000037531365,"threshold_uncertainty_score":0.9833441},"labels":[],"label_agreement":null},{"id":"W4361857244","doi":"10.1007/978-1-0716-2990-1","title":"Transgenesis","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centro Nacional de Biotecnología; Genentech; Novartis Pharma; Hospital for Sick Children; Medical Research Council; Centre National de la Recherche Scientifique; Institut National de la Santé et de la Recherche Médicale; St. Jude Children's Research Hospital; PHENOMIN; Instituto de Salud Carlos III; University of Tokyo; Washington University in St. Louis; University of Missouri","keywords":"Transgenesis; Genotyping; Computational biology; Biology; Genetics; Gene; Genotype","score_opus":0.028767072878247556,"score_gpt":0.3855525603091486,"score_spread":0.35678548743090105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4361857244","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00063899474,0.0070504067,0.9238035,0.00019270244,0.0015071542,0.0005619522,0.0000567571,0.00006040576,0.06612812],"genre_scores_gemma":[0.00006878238,0.002279828,0.17401065,0.0002744903,0.00069230254,0.00008821809,0.00077276694,0.0001985468,0.82161444],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9973802,0.00053165684,0.00045186936,0.0011213595,0.0000925348,0.00042238634],"domain_scores_gemma":[0.99890226,0.000031145028,0.00014683131,0.00076954934,0.000076117874,0.00007407702],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010063497,0.00039678806,0.00047950825,0.00024633508,0.000040995175,0.00001116435,0.00038296726,0.0012729035,0.000031906853],"category_scores_gemma":[0.00018845951,0.00039546008,0.00029752802,0.00015006575,0.00020761948,5.993188e-7,0.0002135845,0.000331947,0.000051641877],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039902607,0.000022431244,0.000041810235,0.000043161235,0.00011507032,0.000021787948,0.000012398059,0.000070641574,0.9759467,0.001528895,0.0027479508,0.019409228],"study_design_scores_gemma":[0.00031243876,0.00044821762,0.000077136305,0.000032732813,0.00006166887,0.000023765117,0.000007619629,0.000017409713,0.19722113,0.0147249345,0.7864795,0.0005934641],"about_ca_topic_score_codex":0.0000081964445,"about_ca_topic_score_gemma":0.000021898033,"teacher_disagreement_score":0.7837315,"about_ca_system_score_codex":0.000042889933,"about_ca_system_score_gemma":0.00024801845,"threshold_uncertainty_score":0.99984974},"labels":[{"model":"gemma","categories":[],"domain":null,"study_design":"not_applicable","genre":"other","about_ca_system":false,"about_ca_topic":false,"confidence":"low"},{"model":"gpt","categories":[],"domain":null,"study_design":"bench_or_experimental","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"}],"label_agreement":"split"},{"id":"W4362682897","doi":"10.1007/978-1-0716-3155-3_9","title":"Drug Target Elucidation Through Isolation and Analysis of Drug-Resistant Mutants in Cryptococcus neoformans","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Cryptococcus neoformans; Drug; Antifungal; Antifungal drug; Antifungal drugs; Drug repositioning; Cryptococcus; Isolation (microbiology); Computational biology; Natural product; Biology; Drug discovery; Microbiology; Pharmacology; Bioinformatics; Biochemistry","score_opus":0.025541930972293448,"score_gpt":0.4062269808957019,"score_spread":0.38068504992340846,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362682897","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7225169,0.0005210514,0.27525494,0.00032766935,0.000083362946,0.0002639996,0.000013879168,0.000022878525,0.0009953491],"genre_scores_gemma":[0.6543471,0.00042663715,0.34480667,0.00013414254,0.0000125370525,0.0000619,0.0001227454,0.000011036522,0.000077201206],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99877226,0.000430205,0.00035102147,0.00021760445,0.00005280914,0.00017608792],"domain_scores_gemma":[0.9994922,0.00019899546,0.00008117997,0.00015840284,0.000050040835,0.000019156323],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010507626,0.00009584953,0.0004280352,0.00067334296,0.00003317796,0.0000029425114,0.000033372722,0.00007809634,0.000023066952],"category_scores_gemma":[0.0003368121,0.000082034465,0.000074409785,0.0018986644,0.00008357619,0.000030299303,0.000053318738,0.00011673672,0.0000015046942],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001132387,0.00007226389,0.27193,0.00005728518,0.0003855718,0.000022283102,0.002032367,0.0006736515,0.7172388,0.0027569935,0.000030083795,0.004687496],"study_design_scores_gemma":[0.0017673259,0.0003086612,0.8056643,0.000076692326,0.0006307279,0.0000041390804,0.001773222,0.039073598,0.13451076,0.013866216,0.0020401387,0.00028425053],"about_ca_topic_score_codex":0.00032891484,"about_ca_topic_score_gemma":0.00022282857,"teacher_disagreement_score":0.582728,"about_ca_system_score_codex":0.000037353373,"about_ca_system_score_gemma":0.000017822163,"threshold_uncertainty_score":0.33452684},"labels":[],"label_agreement":null},{"id":"W4362690265","doi":"10.1007/978-1-0716-3155-3_10","title":"Chemical-Genetic Approaches for Exploring Mode of Action of Antifungal Compounds in the Fungal Pathogen Candida albicans","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University Health Network; University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Canadian Institute for Advanced Research","keywords":"Candida albicans; Biology; Mode of action; Phenotypic screening; Genetic screen; Fungal pathogen; Corpus albicans; Antifungal drug; Computational biology; Drug discovery; Microbiology; Antifungal; Pathogen; Mutant; Genetics; Phenotype; Gene; Bioinformatics; Biochemistry","score_opus":0.18800667200717597,"score_gpt":0.4380583241484465,"score_spread":0.2500516521412705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4362690265","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82082,0.00018668456,0.17822869,0.000098828816,0.000060017246,0.00039306044,0.00002449,0.000009621682,0.00017865363],"genre_scores_gemma":[0.8514837,0.000050216076,0.14822774,0.000030903728,0.000021286849,0.00012136783,0.000042693795,0.000011598808,0.000010516174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99837273,0.000580891,0.00041191856,0.00028296906,0.00010033925,0.00025113657],"domain_scores_gemma":[0.9990288,0.00047641702,0.00009266861,0.0003324365,0.000042483374,0.000027200138],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014372809,0.00011431545,0.00043504193,0.00016456649,0.00001714195,0.0000019988343,0.00014900453,0.00013589942,0.000004440047],"category_scores_gemma":[0.00057587976,0.000085757456,0.00013253832,0.00047759272,0.00018547442,0.0000151771965,0.000041445,0.00017383396,3.206948e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00025193993,0.00008606554,0.07832887,0.00019225021,0.000025213383,0.000010903396,0.00048586578,0.00007494658,0.90928954,0.0006782825,0.000005562519,0.010570536],"study_design_scores_gemma":[0.001093239,0.00028692748,0.09113155,0.00007085008,0.00006397583,0.000012593295,0.0017023076,0.004157826,0.89629376,0.004926086,0.00012399076,0.00013689332],"about_ca_topic_score_codex":0.00014644985,"about_ca_topic_score_gemma":0.00006654875,"teacher_disagreement_score":0.030663732,"about_ca_system_score_codex":0.000038376274,"about_ca_system_score_gemma":0.000066552275,"threshold_uncertainty_score":0.34970877},"labels":[],"label_agreement":null},{"id":"W4364352132","doi":"10.1007/978-1-0716-3080-8_12","title":"Assays to Study Hypoxia-Inducible Factor Prolyl Hydroxylase Domain 2 (PHD2), a Key Human Oxygen Sensing Protein","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Hydroxylation; Hypoxia-inducible factors; Regulator; Cell biology; Enzyme; Chemistry; Hypoxia (environmental); Biochemistry; Gene isoform; Oxygen; Biology; Gene","score_opus":0.031750870955797296,"score_gpt":0.3808607790847279,"score_spread":0.34910990812893056,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364352132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8568253,0.0005085585,0.1392566,0.00021848967,0.00068600837,0.0019560251,0.00003757095,0.00008860706,0.0004228444],"genre_scores_gemma":[0.5682752,0.000036942223,0.42804042,0.0008057998,0.0010325826,0.0005622012,0.00016318852,0.00017201749,0.00091160886],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99454224,0.002301834,0.00063421344,0.001356512,0.00020574887,0.0009594278],"domain_scores_gemma":[0.99829465,0.000046316858,0.00016184965,0.0011338738,0.0001082097,0.00025512604],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0025245803,0.00048377778,0.00066020334,0.00047202056,0.00018105684,0.000045218345,0.0005262655,0.00047359764,0.000030186997],"category_scores_gemma":[0.00070650835,0.00047914917,0.000219373,0.0009256079,0.00012070927,0.000005750038,0.0006485869,0.0003622153,0.00004172478],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009809553,0.00017751408,0.0004175631,0.000017468612,0.00013082987,0.00005103686,0.00048312696,0.000058030917,0.9794628,0.00016465671,0.00018074358,0.018758135],"study_design_scores_gemma":[0.0018580254,0.0010798397,0.0027048683,0.000022146693,0.000037379767,0.000025164816,0.00037156558,0.000043638825,0.93475974,0.0031515474,0.0552414,0.0007046898],"about_ca_topic_score_codex":0.00018742341,"about_ca_topic_score_gemma":0.0001624636,"teacher_disagreement_score":0.28878382,"about_ca_system_score_codex":0.000053511725,"about_ca_system_score_gemma":0.00013577862,"threshold_uncertainty_score":0.999766},"labels":[],"label_agreement":null},{"id":"W4364856196","doi":"10.1007/978-1-0716-2950-5_19","title":"Ultrasensitive Reverse Transcriptase Loop-Mediated Isothermal Amplification (US-LAMP)-Based Detection of Malaria Infection from Dried Blood Spots","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Malaria Research and Control","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Loop-mediated isothermal amplification; Reverse transcriptase; Malaria; Reverse Transcription Loop-mediated Isothermal Amplification; Dried blood; Diagnostic test; Virology; DNA extraction; Polymerase chain reaction; Nucleic acid; Biology; Plasmodium falciparum; Computational biology; Molecular biology; DNA; Chromatography; Medicine; Chemistry; Immunology; Genetics","score_opus":0.022005721514435014,"score_gpt":0.3590814823341726,"score_spread":0.33707576081973756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364856196","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49090305,0.000056420922,0.5076371,0.00054554065,0.00013026113,0.0005330308,0.00006005341,0.000068666246,0.00006586132],"genre_scores_gemma":[0.9427148,0.000052039617,0.05601644,0.00036416296,0.000053608717,0.000118401294,0.0006178349,0.00003077838,0.000031906908],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966,0.002024224,0.00042669472,0.0004360268,0.00015667116,0.00035643135],"domain_scores_gemma":[0.998711,0.00049772696,0.00013615035,0.00036908814,0.00016716174,0.000118906755],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015029622,0.00017802193,0.0004451698,0.00053241855,0.00003895764,0.000006785906,0.00007597934,0.0003553737,0.00012652425],"category_scores_gemma":[0.0019492873,0.00017433388,0.00015838757,0.0008879733,0.00015214949,0.000029474837,0.000015384025,0.00037956174,0.000021018805],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012238505,0.00018124045,0.008005659,0.000041265852,0.00014587927,0.00011108665,0.000060716284,0.0000594274,0.97851574,0.000293382,0.000003825241,0.011357935],"study_design_scores_gemma":[0.004396485,0.00047261908,0.15237401,0.000038335704,0.00015994314,0.000008261734,0.000034670462,0.006858751,0.83469313,0.00065957784,0.0001717462,0.00013248024],"about_ca_topic_score_codex":0.00150332,"about_ca_topic_score_gemma":0.00007839491,"teacher_disagreement_score":0.45181176,"about_ca_system_score_codex":0.000052054835,"about_ca_system_score_gemma":0.00012269436,"threshold_uncertainty_score":0.7109129},"labels":[],"label_agreement":null},{"id":"W4364856240","doi":"10.1007/978-1-0716-3064-8_14","title":"Bovid Interspecies Somatic Cell Nuclear Transfer with Ooplasm Transfer","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Zoo","funders":"","keywords":"Somatic cell nuclear transfer; Biology; Somatic cell; Oocyte; Mitochondrial DNA; Cell biology; Embryo; Blastocyst; Genetics; Embryogenesis","score_opus":0.029274177805404433,"score_gpt":0.36421609366892294,"score_spread":0.3349419158635185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364856240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6493513,0.00018919466,0.34553748,0.0012049779,0.00016108618,0.0003927188,0.0000058625214,0.00011579508,0.0030415836],"genre_scores_gemma":[0.8116438,0.00008438609,0.18626791,0.001162742,0.000057814803,0.00006383732,0.000044556975,0.000052294115,0.0006226679],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768347,0.0009830946,0.00030744364,0.00058042567,0.00006746046,0.00037809942],"domain_scores_gemma":[0.9992026,0.00016472717,0.000013729924,0.00047809747,0.0000669799,0.00007388343],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011436153,0.00020424106,0.0004880629,0.00023398457,0.000043505628,0.000005116532,0.00014232821,0.00027116085,0.00026860082],"category_scores_gemma":[0.00025590122,0.00014635922,0.00012264898,0.00047329807,0.00042274245,0.00002327021,0.000032441858,0.00037654702,0.000106700754],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0016764904,0.00013704709,0.006337812,0.00008488066,0.00008972913,0.00014039746,0.0010604269,0.0000039640177,0.98473245,0.0010676535,0.00005257361,0.004616565],"study_design_scores_gemma":[0.0031736097,0.002066845,0.07424691,0.00007868137,0.00015618905,0.00013326257,0.00087624165,0.00021255977,0.8990047,0.003726048,0.01589832,0.00042663762],"about_ca_topic_score_codex":0.000013045726,"about_ca_topic_score_gemma":0.00000497361,"teacher_disagreement_score":0.16229248,"about_ca_system_score_codex":0.00003890791,"about_ca_system_score_gemma":0.000043089523,"threshold_uncertainty_score":0.59683555},"labels":[],"label_agreement":null},{"id":"W4364856269","doi":"10.1007/978-1-0716-3064-8_12","title":"Cattle Cloning by Somatic Cell Nuclear Transfer","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Somatic cell nuclear transfer; Reprogramming; Cloning (programming); Biology; Epigenetics; Somatic cell; Induced pluripotent stem cell; Chromatin; Computational biology; Genetics; Cell biology; Embryonic stem cell; Cell; Embryo; Blastocyst; Computer science; DNA; Gene; Embryogenesis","score_opus":0.019199647915919018,"score_gpt":0.3678360271151939,"score_spread":0.3486363791992749,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364856269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6218463,0.00093721575,0.3731589,0.0002838382,0.00020886962,0.00034442905,0.000029465335,0.000061328225,0.003129597],"genre_scores_gemma":[0.6083448,0.0011750413,0.383499,0.0012673632,0.00015243897,0.00021106967,0.0009465397,0.00026208817,0.0041416506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99716735,0.0011699203,0.00031254874,0.0005966851,0.000113245595,0.0006402462],"domain_scores_gemma":[0.99925655,0.00007730043,0.000031283304,0.00049456325,0.00003584835,0.00010447314],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012714847,0.00021068325,0.00026723696,0.00018485883,0.00006667535,0.000018044335,0.00044455176,0.0003570309,0.00007417255],"category_scores_gemma":[0.00020139689,0.00021098639,0.00012972433,0.00042235322,0.00014104664,0.000002371201,0.00023792143,0.00024224028,0.00017197836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024545492,0.000046325044,0.0006058768,0.000037820293,0.000025172958,0.000019120522,0.000053761192,0.00010206142,0.99531657,0.00012349778,0.0011051999,0.002540062],"study_design_scores_gemma":[0.00058306294,0.00020782935,0.00017802136,0.000008904174,0.000008606411,0.000009636286,0.00006840182,0.0005162865,0.9481565,0.0005087506,0.049501657,0.0002523486],"about_ca_topic_score_codex":0.00003478188,"about_ca_topic_score_gemma":0.0000054782026,"teacher_disagreement_score":0.04839646,"about_ca_system_score_codex":0.00002391351,"about_ca_system_score_gemma":0.000046940982,"threshold_uncertainty_score":0.8603775},"labels":[],"label_agreement":null},{"id":"W4364856630","doi":"10.1007/978-1-0716-3064-8_10","title":"Somatic Cell Nuclear Transfer in Pigs","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Genetics and Reproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Somatic cell nuclear transfer; Somatic cell; clone (Java method); Biology; Livestock; Cloning (programming); Biotechnology; Genetics; Embryo; Gene; Ecology; Computer science; Embryogenesis; Blastocyst","score_opus":0.018356259124960268,"score_gpt":0.3527663488105596,"score_spread":0.3344100896855994,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4364856630","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84848326,0.00047444686,0.14916655,0.0001796269,0.00022793238,0.0002176149,0.0000038249536,0.000024335832,0.0012223994],"genre_scores_gemma":[0.8808016,0.00048767577,0.11774753,0.0002563992,0.00008907257,0.000040005736,0.00006906421,0.000050384784,0.00045825163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824965,0.0005405705,0.00028492676,0.0005266179,0.000050723753,0.0003475272],"domain_scores_gemma":[0.99953276,0.000018157045,0.00002634659,0.00035681794,0.000022607966,0.00004333266],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008756943,0.00015470687,0.00020310943,0.00019213151,0.000027862423,0.000007820896,0.00019532126,0.00028497292,0.000028432802],"category_scores_gemma":[0.000116270356,0.00014956911,0.00008881507,0.00038744597,0.000085518186,0.000001304564,0.00010650603,0.00015022083,0.000043876764],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028940078,0.000047591824,0.0026694357,0.000020247375,0.000009152708,0.000015033469,0.00007646943,0.00023675007,0.99333256,0.00034074168,0.000040169907,0.0031829125],"study_design_scores_gemma":[0.0008323443,0.00046507036,0.00838467,0.000013535212,0.000011298462,0.000015068639,0.00017185001,0.00076781865,0.95700145,0.0029358068,0.029038755,0.00036233242],"about_ca_topic_score_codex":0.000023053559,"about_ca_topic_score_gemma":0.000015022801,"teacher_disagreement_score":0.036331106,"about_ca_system_score_codex":0.000012984637,"about_ca_system_score_gemma":0.000028898587,"threshold_uncertainty_score":0.60992515},"labels":[],"label_agreement":null},{"id":"W4366351948","doi":"10.1007/978-1-0716-3020-4_6","title":"The Imaging Flow Cytometry-Based Cytokinesis-Block MicroNucleus (CBMN) Assay","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carcinogens and Genotoxicity Assessment","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Health Canada","funders":"","keywords":"Biodosimetry; Micronucleus test; Flow cytometry; Micronucleus; Ionizing radiation; Nuclear medicine; Medical physics; Medicine; Pathology; Physics; Irradiation; Immunology; Internal medicine","score_opus":0.014205432947710733,"score_gpt":0.37149819440592535,"score_spread":0.35729276145821465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366351948","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13050541,0.0018995408,0.86411697,0.0016571974,0.0006319294,0.0004342849,0.00005064362,0.000070888804,0.0006331444],"genre_scores_gemma":[0.38321394,0.00034538202,0.6126408,0.0023960022,0.00027513274,0.00023580813,0.00034811744,0.000120515324,0.00042427753],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966688,0.0014042279,0.0004021599,0.0006807292,0.00012781697,0.0007162743],"domain_scores_gemma":[0.9986669,0.00023675838,0.00010951832,0.00080181693,0.00009343336,0.00009160701],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029063497,0.00028826922,0.00028997858,0.00023628643,0.00020489562,0.00005280681,0.00052893313,0.00024406702,0.000011644585],"category_scores_gemma":[0.0005924002,0.00023418943,0.00024245729,0.00072925683,0.00023670861,0.000001993223,0.00036584478,0.00023083748,0.000024257972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005213147,0.000033599143,0.0040468792,0.000010097193,0.00004603915,0.000038959126,0.000011348811,0.0007737723,0.964599,0.00015874104,0.00051347516,0.029715942],"study_design_scores_gemma":[0.00076819095,0.00014498543,0.0032241591,0.000009508763,0.000023558658,0.000026193426,0.00007388773,0.0067413934,0.8863349,0.00074964185,0.10152923,0.0003743274],"about_ca_topic_score_codex":0.000040315444,"about_ca_topic_score_gemma":0.000052193504,"teacher_disagreement_score":0.25270852,"about_ca_system_score_codex":0.000050504106,"about_ca_system_score_gemma":0.00012312744,"threshold_uncertainty_score":0.95499676},"labels":[],"label_agreement":null},{"id":"W4366352939","doi":"10.1007/978-1-0716-3040-2_16","title":"Assessment of HMGB1 Release During Experimentally Induced Pyroptosis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inflammasome and immune disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Pyroptosis; HMGB1; Extracellular; Inflammasome; Innate immune system; Cell biology; Inflammation; Lytic cycle; Secretion; Immune system; Chemistry; Immunology; Biology; Biochemistry","score_opus":0.017603196837845038,"score_gpt":0.40603481629245447,"score_spread":0.3884316194546094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4366352939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98237216,0.00035707056,0.015532228,0.000052751333,0.00013590914,0.00020355656,0.0000033079784,0.000013124669,0.0013298959],"genre_scores_gemma":[0.9282869,0.00018560055,0.07117058,0.00008580414,0.00001577996,0.00009004893,0.000080985315,0.000026032301,0.000058267015],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816895,0.0006181617,0.00040118757,0.00039344566,0.00006395684,0.00035430372],"domain_scores_gemma":[0.99942374,0.00002458924,0.00009389587,0.00039436802,0.00003102585,0.00003235892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070849835,0.0001639841,0.00027153915,0.00028267986,0.000024919904,0.000004433505,0.00023523717,0.00023944156,0.000019330522],"category_scores_gemma":[0.00018356394,0.00017182327,0.000111588706,0.00042390474,0.000079812955,0.0000026096673,0.00024135651,0.00014608487,0.0000030050367],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003729561,0.000061233644,0.020279808,0.000019273913,0.000031852007,0.000015712969,0.000059553426,0.00015198551,0.97664404,0.00034602478,0.0000043524237,0.0023488621],"study_design_scores_gemma":[0.00090480334,0.00020654048,0.043045584,0.00001459453,0.0000046052237,0.000002525644,0.00026899177,0.000110145455,0.9547143,0.00028484582,0.0002659911,0.0001770947],"about_ca_topic_score_codex":0.000054721215,"about_ca_topic_score_gemma":0.000013620519,"teacher_disagreement_score":0.055638358,"about_ca_system_score_codex":0.000026712716,"about_ca_system_score_gemma":0.00006809563,"threshold_uncertainty_score":0.70067495},"labels":[],"label_agreement":null},{"id":"W4371781165","doi":"10.1007/978-1-0716-3052-5_13","title":"Quantifying pH in Malaria Using pHluorin and Flow Cytometry","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Malaria Research and Control","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Flow cytometry; Cytosol; Intracellular; Plasmodium falciparum; Intracellular pH; Cell biology; Biology; Transporter; Fluorescence; Biochemistry; Chemistry; Computational biology; Biophysics; Malaria; Enzyme; Molecular biology; Gene; Immunology","score_opus":0.10209488263346972,"score_gpt":0.4878646255561717,"score_spread":0.385769742922702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4371781165","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3816176,0.0010795831,0.6145809,0.0017573297,0.00015416236,0.00040970236,0.0000036881625,0.00004452457,0.00035246636],"genre_scores_gemma":[0.32115385,0.000109514214,0.678296,0.0002697675,0.000045616795,0.00003429671,0.000013705019,0.000021620599,0.000055619603],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99762475,0.0011491394,0.00026814907,0.00036837955,0.000095383,0.00049421436],"domain_scores_gemma":[0.9992633,0.00032398736,0.00003303728,0.00024839412,0.00003034937,0.00010091685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002948764,0.00012784336,0.00040707135,0.00084954523,0.000026962529,0.00001203741,0.000093638446,0.00021034628,0.000053728458],"category_scores_gemma":[0.0018868835,0.00011546537,0.000053983476,0.001090376,0.0000896508,0.000020546853,0.00014954334,0.0004068921,0.000008237392],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014760802,0.000028086788,0.051678274,0.00005782767,0.000030689218,0.0005815421,0.000054017062,0.000042142205,0.91131485,0.0034836773,0.0000033519702,0.03257796],"study_design_scores_gemma":[0.013419618,0.0009259068,0.31994364,0.00036041613,0.000106525156,0.00038976318,0.0006241582,0.46142387,0.18395959,0.015824815,0.002224483,0.00079721556],"about_ca_topic_score_codex":0.00015739979,"about_ca_topic_score_gemma":0.000025410116,"teacher_disagreement_score":0.72735524,"about_ca_system_score_codex":0.000052541553,"about_ca_system_score_gemma":0.000075489574,"threshold_uncertainty_score":0.4708541},"labels":[],"label_agreement":null},{"id":"W4371784122","doi":"10.1007/978-1-0716-3052-5_28","title":"Multiplexed Viability Assays for High-Throughput Screening of Spheroids of Multiple Sizes","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Polytechnique Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Spheroid; Microfluidics; Carboplatin; Cellular pathology; Viability assay; Drug development; Drug; High-throughput screening; Paclitaxel; Biomedical engineering; Cell; Nanotechnology; Chemistry; Materials science; Cell culture; Biology; Pharmacology; Cancer; Medicine; Bioinformatics; Pathology; Chemotherapy; Cisplatin","score_opus":0.048604279835928375,"score_gpt":0.41415252394572816,"score_spread":0.3655482441097998,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4371784122","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21632259,0.00010485789,0.7827827,0.00004621271,0.00018567547,0.0003444781,0.000030835672,0.00010399486,0.00007865679],"genre_scores_gemma":[0.324414,0.000015263764,0.67542535,0.000007021583,0.000016124817,0.00006563915,0.000022165153,0.000025918718,0.000008484521],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99782103,0.00071886386,0.00056018634,0.00030601228,0.00014217437,0.00045170248],"domain_scores_gemma":[0.9953074,0.004053551,0.00006580527,0.00041581038,0.00009849506,0.00005895837],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0043048053,0.00014955431,0.0004903517,0.00022079822,0.000018834566,0.0000033320634,0.00036213745,0.00027996534,0.000028805916],"category_scores_gemma":[0.008847363,0.00014607089,0.000122333,0.00073411665,0.00031351286,0.000018143686,0.0002148085,0.00023879975,0.0000023418074],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030413097,0.000024650155,0.007967204,0.00026299068,0.000053215244,0.0000021245132,0.000061748,0.0037076524,0.92326957,0.0007511531,0.000019891791,0.06384938],"study_design_scores_gemma":[0.00079877954,0.0001113613,0.005314002,0.000033262822,0.0000072984244,4.2989214e-7,0.00003963191,0.106052436,0.87616974,0.010847092,0.00049440627,0.00013156286],"about_ca_topic_score_codex":0.00014175901,"about_ca_topic_score_gemma":0.0000141263445,"teacher_disagreement_score":0.108091414,"about_ca_system_score_codex":0.000035320347,"about_ca_system_score_gemma":0.000024467026,"threshold_uncertainty_score":0.9995015},"labels":[],"label_agreement":null},{"id":"W4375824528","doi":"10.1007/978-1-0716-3151-5_21","title":"Isolation and Preparation of Extracellular Proteins from Lignocellulose-Degrading Fungi for Comparative Proteomic Studies Using Mass Spectrometry","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fermentation and Sensory Analysis","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Agriculture and Agri-Food Canada","funders":"","keywords":"Proteomics; Mass spectrometry; Biology; Metabolomics; Organism; Proteome; Biochemistry; Computational biology; Chemistry; Chromatography; Bioinformatics","score_opus":0.129201591734203,"score_gpt":0.4324474275300385,"score_spread":0.3032458357958355,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7420384,0.00063109625,0.25671604,0.00006975253,0.000034082066,0.00046566458,0.000017042608,0.000017653283,0.000010201521],"genre_scores_gemma":[0.54031533,0.00004176014,0.45947582,0.000011568251,0.00002307439,0.000042580723,0.0000634398,8.995057e-7,0.00002550533],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998539,0.0006734899,0.00030152185,0.00028637878,0.00005165814,0.00014796188],"domain_scores_gemma":[0.99928766,0.00043076603,0.00016009994,0.000043816814,0.00005556897,0.000022105623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007304329,0.000105452484,0.0003100078,0.00007319785,0.000077515615,0.000011367446,0.000066406414,0.00009136071,0.000016196536],"category_scores_gemma":[0.0001497652,0.00005362563,0.000069634545,0.0005215656,0.0000757925,0.000040293264,0.000027848435,0.00005786906,9.4510443e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051913958,0.000014904884,0.0026396692,0.000010636015,0.0000621428,0.0000010010978,0.00039273794,0.00019066238,0.9944247,0.00047088772,0.00000139814,0.0017393511],"study_design_scores_gemma":[0.00017555863,0.000251605,0.0028659485,0.000016635036,0.000037071848,5.4020927e-7,0.001379236,0.04029211,0.93767077,0.017173423,0.000023900246,0.00011320245],"about_ca_topic_score_codex":0.0000578604,"about_ca_topic_score_gemma":0.00002930502,"teacher_disagreement_score":0.20275977,"about_ca_system_score_codex":0.000027629658,"about_ca_system_score_gemma":0.0000044882227,"threshold_uncertainty_score":0.21867897},"labels":[],"label_agreement":null},{"id":"W4375824583","doi":"10.1007/978-1-0716-3151-5_13","title":"Flow Cytometry-Based Detection of Siglec Ligands","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"SIGLEC; Flow cytometry; Cell biology; Glycan; Immune system; Cell; Receptor; Chemistry; Mass cytometry; Biology; Biochemistry; Glycoprotein; Immunology; Phenotype; Gene","score_opus":0.0248818479596669,"score_gpt":0.41197237648894663,"score_spread":0.3870905285292797,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824583","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2615336,0.00022281139,0.7375077,0.00009233164,0.00011710584,0.00019492839,0.000010135293,0.000022316728,0.00029910146],"genre_scores_gemma":[0.7961051,0.00004952059,0.20325407,0.00014369929,0.00004335124,0.0000746604,0.00013360109,0.000026827825,0.00016915682],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998307,0.00055624667,0.00030049362,0.0003884626,0.000112398266,0.0003354155],"domain_scores_gemma":[0.99927485,0.000073510346,0.00007477478,0.00040750837,0.000106850726,0.00006248771],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014048665,0.00014114355,0.00022104547,0.00051425165,0.000035507153,0.000007162483,0.00022530695,0.00031968602,0.000029302322],"category_scores_gemma":[0.0010650749,0.00013836716,0.0001231758,0.0010776093,0.00012923307,0.0000015559198,0.00012534784,0.00015677292,0.000016283477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009367034,0.00003178936,0.001319291,0.000022558152,0.000019992627,0.000007808769,0.000009597388,0.0010189798,0.95753956,0.00006255375,0.000018216102,0.039855994],"study_design_scores_gemma":[0.00064999633,0.00040645254,0.0011321506,0.000007392362,0.0000043975365,0.0000032299208,0.000014554058,0.009662786,0.98143256,0.0005853786,0.0059644394,0.00013669294],"about_ca_topic_score_codex":0.000028521126,"about_ca_topic_score_gemma":0.000024017536,"teacher_disagreement_score":0.5345715,"about_ca_system_score_codex":0.000016975524,"about_ca_system_score_gemma":0.00007917826,"threshold_uncertainty_score":0.5642449},"labels":[],"label_agreement":null},{"id":"W4375824594","doi":"10.1007/978-1-0716-3151-5_17","title":"A Rapid Protocol for Preparing 8-Aminopyrene-1,3,6-Trisulfonate-Labeled Glycans for Capillary Electrophoresis-Based Enzyme Assays","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia, Okanagan Campus; University of British Columbia; Agriculture and Agri-Food Canada","funders":"","keywords":"Glycan; Capillary electrophoresis; Chromatography; Fluorophore; Chemistry; Fluorescence; Elution; Polyacrylamide; Polyacrylamide gel electrophoresis; Electrophoresis; Reagent; Biochemistry; Enzyme; Glycoprotein; Organic chemistry","score_opus":0.04759536780486987,"score_gpt":0.45081570784574015,"score_spread":0.40322034004087026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824594","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011435996,0.00020815148,0.91080827,0.00033684899,0.00011671133,0.07655673,0.00007347825,0.00008488301,0.0003789292],"genre_scores_gemma":[0.007294109,0.000032455668,0.55240613,0.0005104825,0.00017372196,0.43799585,0.00085030997,0.00012383319,0.00061308226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963559,0.0010070336,0.0005505358,0.00095783337,0.00015530501,0.000973398],"domain_scores_gemma":[0.99847907,0.00031437204,0.00015865704,0.00065314583,0.00026042,0.00013431888],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0026602442,0.0003445997,0.00043625146,0.00043133323,0.00014964663,0.000034432098,0.00048652757,0.0005654186,0.000026298503],"category_scores_gemma":[0.002144523,0.00033435022,0.00029133036,0.0006156849,0.00013692268,0.000004112519,0.00017715902,0.00020853578,0.0000059452736],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014878332,0.00009561744,0.00020870804,0.00016178847,0.00007260354,0.000006255366,0.0000129250375,0.0003723543,0.980072,0.00065255875,0.0017507861,0.015106544],"study_design_scores_gemma":[0.0038193208,0.0013789637,0.000053824904,0.000016917074,0.000011259449,0.0000039573615,0.000010208985,0.008254073,0.775003,0.0017950084,0.20934318,0.00031025434],"about_ca_topic_score_codex":0.000029471796,"about_ca_topic_score_gemma":0.000051000363,"teacher_disagreement_score":0.36143914,"about_ca_system_score_codex":0.000066898305,"about_ca_system_score_gemma":0.0003771505,"threshold_uncertainty_score":0.99991083},"labels":[],"label_agreement":null},{"id":"W4375824597","doi":"10.1007/978-1-0716-3151-5_8","title":"Qualitative and Quantitative Characterization of Protein–Carbohydrate Interactions by NMR Spectroscopy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University; Dalhousie University; Simon Fraser University","funders":"","keywords":"Heteronuclear molecule; Heteronuclear single quantum coherence spectroscopy; Chemistry; Dissociation constant; Nuclear magnetic resonance spectroscopy; Titration; Carbohydrate; Spectroscopy; Crystallography; Stereochemistry; Biochemistry; Physical chemistry; Physics","score_opus":0.022001948448973296,"score_gpt":0.4316998598949732,"score_spread":0.40969791144599993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824597","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5166163,0.00014919006,0.48272914,0.00010391842,0.00005009554,0.00019769919,0.000054789703,0.000008975523,0.00008994322],"genre_scores_gemma":[0.35628396,0.00020970553,0.64188147,0.00016260603,0.000030261775,0.00016200327,0.0010231663,0.00003631006,0.0002105301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981237,0.0010100495,0.00027529532,0.0003443406,0.000043788394,0.00020280795],"domain_scores_gemma":[0.9995018,0.000054964843,0.00014686896,0.00020075627,0.000060434566,0.000035147415],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00063179765,0.00014443987,0.0002280684,0.0001437411,0.00003076676,0.000007216504,0.00010938273,0.00015211361,0.0000048689526],"category_scores_gemma":[0.00035462392,0.00013986455,0.000048076134,0.0003159582,0.00018485043,0.0000046161695,0.00011255366,0.00011978174,0.0000014718383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006859171,0.000016633036,0.00015333582,0.00001797134,0.000042167954,0.0000017790857,0.00043436847,0.0000059244944,0.99281627,0.005174041,0.000006837355,0.0012621104],"study_design_scores_gemma":[0.00025503885,0.00032510725,0.00028969187,0.000014161009,0.000008245409,0.0000022308934,0.00026611416,0.00049169635,0.9862945,0.010946754,0.0009603604,0.00014607464],"about_ca_topic_score_codex":0.000025353544,"about_ca_topic_score_gemma":0.000010783969,"teacher_disagreement_score":0.1603323,"about_ca_system_score_codex":0.000010536894,"about_ca_system_score_gemma":0.000029315139,"threshold_uncertainty_score":0.5703511},"labels":[],"label_agreement":null},{"id":"W4375824604","doi":"10.1007/978-1-0716-3151-5_1","title":"A Low-Volume, Parallel Copper-Bicinchoninic Acid (BCA) Assay for Glycoside Hydrolases","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Michael Smith Health Research BC; University of British Columbia Hospital; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Bicinchoninic acid assay; Chemistry; Glycoside hydrolase; Chromatography; Copper; Polysaccharide; Glycoside; Biochemistry; Enzyme; Stereochemistry; Organic chemistry","score_opus":0.022300413129446483,"score_gpt":0.371966977659264,"score_spread":0.34966656452981754,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824604","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1456479,0.0005459603,0.85131395,0.0009353072,0.00060236326,0.00047586559,0.00003646336,0.00007302046,0.0003691763],"genre_scores_gemma":[0.30909243,0.0010567833,0.6774531,0.002334409,0.00066853996,0.0010169595,0.003123939,0.00015857686,0.0050952276],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99759483,0.0008169202,0.00037928505,0.00068700063,0.00006713983,0.00045480512],"domain_scores_gemma":[0.99917156,0.00006293566,0.00012465905,0.00047621664,0.00008925,0.00007540781],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013272449,0.00022935712,0.00029441217,0.00018453097,0.00007823719,0.000018521208,0.00025667335,0.00036431674,0.000033727825],"category_scores_gemma":[0.0012132968,0.00023294662,0.00015908355,0.0003708556,0.00011529569,0.0000045850325,0.00014843653,0.00014180175,0.000031510994],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011989089,0.00005399756,0.0012398639,0.000026575028,0.000042003012,0.0000034922025,0.000022607963,0.00021955241,0.98678374,0.0003965876,0.0017128502,0.009378862],"study_design_scores_gemma":[0.00080369454,0.0004016754,0.00061828695,0.000011427256,0.000016206854,0.000010963601,0.000030534644,0.00088413927,0.9163066,0.0013570242,0.07928634,0.00027310962],"about_ca_topic_score_codex":0.0000057348752,"about_ca_topic_score_gemma":0.000010505083,"teacher_disagreement_score":0.17386082,"about_ca_system_score_codex":0.000021174767,"about_ca_system_score_gemma":0.000066008775,"threshold_uncertainty_score":0.94992876},"labels":[],"label_agreement":null},{"id":"W4375824611","doi":"10.1007/978-1-0716-3151-5_20","title":"Identification of Genes Involved in the Degradation of Lignocellulose Using Comparative Transcriptomics","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Agriculture and Agri-Food Canada","funders":"","keywords":"Transcriptome; Computational biology; Organism; Biology; Gene; Identification (biology); Lignocellulosic biomass; Biotechnology; Biomass (ecology); Biofuel; Gene expression; Genetics; Botany; Ecology","score_opus":0.081874269353908,"score_gpt":0.3760612251574139,"score_spread":0.2941869558035059,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824611","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6532739,0.0003792411,0.34603342,0.000033629,0.00014062549,0.000110739515,0.0000026452683,0.000012067683,0.0000137258685],"genre_scores_gemma":[0.91707754,0.00015476915,0.08270815,0.000013061924,0.0000072318467,0.00000658955,0.000022990702,0.0000054789652,0.000004210363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990273,0.00047349845,0.00028341345,0.00010102527,0.000036830792,0.000077943834],"domain_scores_gemma":[0.9997386,0.0000539004,0.000051156167,0.00012661889,0.00002376589,0.0000059902322],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010649832,0.000057837067,0.00013812703,0.00020925463,0.000008518386,0.0000021859307,0.000104157494,0.000085086016,0.0000020765044],"category_scores_gemma":[0.000027324257,0.00004781928,0.0000325106,0.0005521447,0.00006393681,0.000020231597,0.000009332594,0.00007587012,7.8308943e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000061802325,0.000012502533,0.00090351497,0.000060906343,0.000007523548,4.1816241e-7,0.00051208894,0.0037038606,0.9926074,0.00030403907,0.0000038380113,0.0018777105],"study_design_scores_gemma":[0.00013025511,0.00001315054,0.00065780344,0.0000064934957,0.0000060771536,5.328553e-7,0.0006455329,0.0755341,0.921882,0.0009808555,0.00010027683,0.000042952877],"about_ca_topic_score_codex":0.000025070507,"about_ca_topic_score_gemma":0.0000062808817,"teacher_disagreement_score":0.26380363,"about_ca_system_score_codex":0.000016609703,"about_ca_system_score_gemma":0.000007128701,"threshold_uncertainty_score":0.19500136},"labels":[],"label_agreement":null},{"id":"W4375824620","doi":"10.1007/978-1-0716-3151-5_18","title":"Visualization of Carbohydrate Uptake Using Fluorescent Polysaccharides","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Community Ecology and Physiology","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Polysaccharide; Fluorescence; Fluorescence microscope; Fluorescent labelling; Bacteria; Carbohydrate; Chemistry; Flow cytometry; Biochemistry; Cell sorting; Biology; Computational biology; Cell; Molecular biology; Genetics","score_opus":0.03874211435650062,"score_gpt":0.39488373058596865,"score_spread":0.35614161622946805,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824620","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8338145,0.000032507454,0.1655753,0.00002825313,0.00016399968,0.00010552661,0.0000030180738,0.000022446333,0.00025443578],"genre_scores_gemma":[0.72685397,0.00004560739,0.2726814,0.000304291,0.0000116542915,0.0000103520415,0.00005048055,0.000017846258,0.000024408955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997734,0.0015562732,0.00025061518,0.00019273943,0.00003052237,0.0002358192],"domain_scores_gemma":[0.99952143,0.00012777848,0.000085461346,0.00023408416,0.00000663529,0.000024621391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010303779,0.00009161002,0.00020760701,0.000119249395,0.000050178947,0.0000018758012,0.00022893953,0.00016160116,0.00051193795],"category_scores_gemma":[0.00014747097,0.000090683105,0.000045859706,0.00062182645,0.00025295076,0.000019768877,0.00032751786,0.00011963175,0.000030000338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011504579,0.00002557399,0.0101100905,0.0000046445193,0.0000080651325,0.0000040646883,0.00016871115,0.0026411817,0.9836384,0.0013713794,0.000016911798,0.001999458],"study_design_scores_gemma":[0.00033202348,0.00016070971,0.027966376,0.000012146361,0.000019252377,0.0000050363137,0.000074039235,0.016816912,0.9209027,0.032391433,0.0010786493,0.00024069478],"about_ca_topic_score_codex":0.0005697951,"about_ca_topic_score_gemma":0.00014396357,"teacher_disagreement_score":0.107106075,"about_ca_system_score_codex":0.000042889893,"about_ca_system_score_gemma":0.000010925129,"threshold_uncertainty_score":0.56053615},"labels":[],"label_agreement":null},{"id":"W4375824621","doi":"10.1007/978-1-0716-3151-5_15","title":"Analysis of Complex Carbohydrate Composition in Plant Cell Wall Using Fourier Transform Mid-Infrared Spectroscopy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spectroscopy and Chemometric Analyses","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Fourier transform infrared spectroscopy; Principal component analysis; Fourier transform; Infrared spectroscopy; Infrared; Analytical Chemistry (journal); Spectroscopy; Fourier transform spectroscopy; Materials science; Chemistry; Biological system; Optics; Mathematics; Computer science; Artificial intelligence; Chromatography; Physics; Organic chemistry; Biology","score_opus":0.0414495313229251,"score_gpt":0.3907937114376515,"score_spread":0.3493441801147264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.695047,0.00024928496,0.30149952,0.000049389906,0.00003034685,0.000069675196,0.00006368929,0.00003793658,0.0029531387],"genre_scores_gemma":[0.57804847,0.000106022846,0.42097434,0.000097136035,0.000016307331,0.000018865898,0.0006375624,0.000028912598,0.00007235379],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813974,0.0002998393,0.00058163406,0.00042413417,0.00011495968,0.00043970582],"domain_scores_gemma":[0.99914736,0.00025442222,0.00016523541,0.00034794016,0.00003131423,0.00005373759],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006161151,0.00021586451,0.00081283407,0.0016027207,0.000032866792,0.000009476758,0.00026237895,0.00026219772,0.00033782903],"category_scores_gemma":[0.000050238996,0.00022017675,0.00026044852,0.0043961643,0.0001136316,0.000022613194,0.00005163437,0.0002526883,0.0000018179915],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057292837,0.00008676453,0.012841215,0.000054455006,0.00035904115,0.000047822734,0.0001984752,0.0029203554,0.983223,0.000069165,0.0000042314778,0.00013818154],"study_design_scores_gemma":[0.00048446853,0.000030298062,0.00083038356,0.000009976125,0.0005908402,0.000001549061,0.00013657889,0.08843246,0.907677,0.0015527182,0.000059574795,0.00019413047],"about_ca_topic_score_codex":0.0004787361,"about_ca_topic_score_gemma":0.000052841322,"teacher_disagreement_score":0.11947483,"about_ca_system_score_codex":0.00015734497,"about_ca_system_score_gemma":0.000038781796,"threshold_uncertainty_score":0.89785475},"labels":[],"label_agreement":null},{"id":"W4375824625","doi":"10.1007/978-1-0716-3151-5_16","title":"Separation and Visualization of Glycans by Fluorophore-Assisted Carbohydrate Electrophoresis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Carbohydrate Chemistry and Synthesis","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"Canadian Institutes of Health Research","keywords":"Glycan; Fluorophore; Chemistry; Carbohydrate; Biochemistry; Glycoside hydrolase; Chitobiose; Electrophoresis; Chromatography; Hydrolysis; Glycoprotein; Fluorescence","score_opus":0.016547164797958536,"score_gpt":0.3691008633389883,"score_spread":0.35255369854102975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824625","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94801676,0.00065071724,0.049672022,0.00006991596,0.000042208085,0.00006115616,0.00002960401,0.00006694105,0.0013906974],"genre_scores_gemma":[0.9664886,0.00054739875,0.03204675,0.000046347082,0.000026598234,0.0000755843,0.00039282304,0.00004228166,0.00033361066],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99861544,0.0003166416,0.00036346103,0.00036816497,0.000075755386,0.00026054663],"domain_scores_gemma":[0.9992851,0.00023682894,0.00012483826,0.0002577978,0.000046066656,0.00004936578],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004791558,0.00016593057,0.0003260624,0.00013026202,0.000035421406,0.0000105937215,0.00012632791,0.00029044648,0.00008066731],"category_scores_gemma":[0.00038090028,0.00017203978,0.00006550564,0.0006321307,0.00012573642,0.000018335239,0.00006118104,0.00010945021,0.0000016109315],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003943013,0.000026871578,0.0009606046,0.000070263006,0.00003791278,0.000010332327,0.0000868785,0.00001624923,0.9943524,0.00038269244,0.000053026284,0.003963325],"study_design_scores_gemma":[0.0002287255,0.000025449,0.00012971224,0.000016712562,0.000028310536,0.0000048827465,0.000043806944,0.0019017428,0.99535245,0.0015466124,0.00055938406,0.0001621976],"about_ca_topic_score_codex":0.00010886595,"about_ca_topic_score_gemma":0.000009410009,"teacher_disagreement_score":0.018471867,"about_ca_system_score_codex":0.000045726254,"about_ca_system_score_gemma":0.000030612933,"threshold_uncertainty_score":0.7015579},"labels":[],"label_agreement":null},{"id":"W4375824634","doi":"10.1007/978-1-0716-3151-5_14","title":"Extraction and Verification of Mouse and Human Mucins from Tissue and Fecal Material","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Okanagan University College; Kelowna General Hospital; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"Crohn's and Colitis Canada","keywords":"Mucin; Glycoprotein; Agarose; Sodium dodecyl sulfate; Gel electrophoresis; Polyacrylamide gel electrophoresis; Chemistry; Biochemistry; Chromatography; Agarose gel electrophoresis; Molecular mass; Molecular biology; Biology; DNA; Enzyme","score_opus":0.02844888730919284,"score_gpt":0.43955869292122035,"score_spread":0.41110980561202753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4375824634","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94973725,0.00024169408,0.049627576,0.00008347855,0.000044277,0.00016260592,0.000028752478,0.000008166872,0.00006620757],"genre_scores_gemma":[0.91297626,0.00032339565,0.08611867,0.000032830227,0.000040285562,0.000029280021,0.00031099768,0.000014761,0.00015349439],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99892,0.00043994657,0.00016648651,0.00030313837,0.000040290342,0.00013008685],"domain_scores_gemma":[0.99968743,0.000030113357,0.00004767357,0.0001651465,0.000027561267,0.00004209455],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049288024,0.00008484599,0.00013658096,0.00010596413,0.000036634396,0.000011905093,0.00005117357,0.00019606779,0.0000156649],"category_scores_gemma":[0.00016388572,0.000084351974,0.000012709366,0.00008716033,0.0001496126,0.0000028411494,0.00011400582,0.00006970664,9.1559394e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005057952,0.000012686172,0.0023479674,0.000013872753,0.000011198232,0.000002615162,0.000028753357,0.0000020742586,0.9800941,0.00051302445,0.000009868006,0.016913276],"study_design_scores_gemma":[0.00038728706,0.00020180637,0.018126346,0.000003944666,0.0000047285876,0.000005295723,0.000035021105,0.00010142125,0.97646743,0.0010541028,0.003530277,0.00008234237],"about_ca_topic_score_codex":0.0002628896,"about_ca_topic_score_gemma":0.00003637753,"teacher_disagreement_score":0.03676096,"about_ca_system_score_codex":0.0000043415785,"about_ca_system_score_gemma":0.000010487307,"threshold_uncertainty_score":0.34397736},"labels":[],"label_agreement":null},{"id":"W4376623214","doi":"10.1007/978-1-0716-3214-7_5","title":"In Vitro Biochemical Characterization of Excised Macrocyclizing Thioesterase Domains from Non-ribosomal Peptide Synthetases","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Thioesterase; Thioester; Biochemistry; Cloning (programming); Biosynthesis; Peptide; In vitro; Enzyme; Peptide Biosynthesis; Biology; Chemistry; Molecular biology; Gene; Ribosome; RNA","score_opus":0.01781753674803892,"score_gpt":0.35378382143143206,"score_spread":0.3359662846833931,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4376623214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9774676,0.0001060337,0.02047158,0.0013091706,0.00017796135,0.00031258372,0.00009351562,0.000027986258,0.000033560562],"genre_scores_gemma":[0.7638658,0.00008459794,0.23494788,0.0005267122,0.000087359804,0.000006532785,0.00042716015,0.000021655258,0.000032277174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823725,0.0005067888,0.0004564017,0.00043433887,0.0000712682,0.0002939339],"domain_scores_gemma":[0.9992163,0.00028494757,0.00011853485,0.0002917457,0.000036027155,0.00005239794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006390154,0.00017108994,0.0005297255,0.00034548636,0.000017194963,0.0000055790974,0.0001294263,0.0002510945,0.000043147407],"category_scores_gemma":[0.00087557797,0.00014024272,0.00010405248,0.0005675406,0.00011765551,0.00003052583,0.00011199003,0.00023131596,0.000009010047],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037748227,0.000080090445,0.0008314861,0.0000499283,0.000028503286,0.00013445932,0.00009265408,7.5024417e-7,0.9929424,0.000021958796,0.000013141898,0.005427132],"study_design_scores_gemma":[0.0007135744,0.000051914463,0.0044867224,0.00010561044,0.000030927575,0.000011487226,0.000025777434,0.00018878035,0.9934278,0.0004648592,0.00035623912,0.00013628416],"about_ca_topic_score_codex":0.00011191649,"about_ca_topic_score_gemma":0.000002283161,"teacher_disagreement_score":0.2144763,"about_ca_system_score_codex":0.000039363786,"about_ca_system_score_gemma":0.000032613756,"threshold_uncertainty_score":0.5718932},"labels":[],"label_agreement":null},{"id":"W4377077805","doi":"10.1007/978-1-0716-3056-3_1","title":"Cancer Cell Culture: The Basics and Two-Dimensional Cultures","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":13,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Psychological intervention; Cancer; Computer science; Engineering ethics; Intervention (counseling); Medicine; Engineering","score_opus":0.04481828783222981,"score_gpt":0.477577311979164,"score_spread":0.4327590241469342,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077805","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7712709,0.066245645,0.09142244,0.02343868,0.0020023088,0.003747173,0.00007664595,0.0003592593,0.041436967],"genre_scores_gemma":[0.04646948,0.0073272623,0.88666964,0.014909046,0.00080463575,0.00068447145,0.00017240108,0.00017235258,0.0427907],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981776,0.0009041393,0.00016088689,0.000311082,0.00012598712,0.00032030005],"domain_scores_gemma":[0.9993021,0.00026063042,0.000030731622,0.00027527515,0.000060400132,0.00007089224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012941201,0.00013012155,0.00024052612,0.00006742164,0.000058783262,0.000009436822,0.00012256706,0.00014644633,0.0006039107],"category_scores_gemma":[0.00018895393,0.000076632175,0.00007073929,0.00039253506,0.0002299583,0.000010286837,0.00016093187,0.00035943658,0.000013267678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000709281,0.000021646492,0.0018435019,0.000016893657,0.000042522992,0.000057681573,0.00037998697,0.000058577018,0.974339,0.0011439639,0.00075776,0.021267544],"study_design_scores_gemma":[0.0024816068,0.00032969576,0.0033712587,0.000034746572,0.000065950546,0.000089622,0.0002699205,0.001763522,0.82449967,0.018924646,0.14791547,0.0002539204],"about_ca_topic_score_codex":0.00023270107,"about_ca_topic_score_gemma":0.000060029553,"teacher_disagreement_score":0.7952472,"about_ca_system_score_codex":0.00005172889,"about_ca_system_score_gemma":0.00006351728,"threshold_uncertainty_score":0.66123986},"labels":[],"label_agreement":null},{"id":"W4377077831","doi":"10.1007/978-1-0716-3056-3_3","title":"Three-Dimensional Spheroids for Cancer Research","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":11,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Cancer; Cancer cell; Spheroid; In vivo; Cell culture; 3D cell culture; Computational biology; Cancer research; Biology; Biotechnology; Genetics","score_opus":0.11976509962013702,"score_gpt":0.5201833580307899,"score_spread":0.4004182584106528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077831","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.062185753,0.00089379505,0.93459076,0.0006622119,0.0005833576,0.00037649684,0.000012401732,0.00021182428,0.00048338703],"genre_scores_gemma":[0.0061911903,0.00008630953,0.9926284,0.00007152806,0.00012362597,0.0006531543,0.000022026772,0.000060281935,0.00016348952],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980367,0.00048586648,0.00021825543,0.00030516152,0.0001987121,0.0007553234],"domain_scores_gemma":[0.9977799,0.0017509585,0.000009378594,0.0002749356,0.00009511827,0.00008970964],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.006297628,0.000105791216,0.00019862407,0.00038340202,0.000050378854,0.000010783441,0.00034855597,0.00024285437,0.00013732092],"category_scores_gemma":[0.0020419331,0.00009917649,0.0000588659,0.0011673218,0.00022793011,0.0000110744695,0.00022610574,0.00050211005,0.000057934623],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012285214,0.000008532784,0.0006964919,0.000057534682,0.00002886375,0.00001660145,0.000019739395,0.0024903268,0.85658014,0.0027660972,0.0019779317,0.13534549],"study_design_scores_gemma":[0.0008021738,0.00016462804,0.0023858661,0.00007429255,0.0000057363395,0.0000036735378,0.000021845259,0.26500353,0.46088108,0.17594175,0.09435359,0.0003618099],"about_ca_topic_score_codex":0.00011189913,"about_ca_topic_score_gemma":0.000080425314,"teacher_disagreement_score":0.39569902,"about_ca_system_score_codex":0.000098037235,"about_ca_system_score_gemma":0.000061935236,"threshold_uncertainty_score":0.40443},"labels":[],"label_agreement":null},{"id":"W4377077865","doi":"10.1007/978-1-0716-3056-3_5","title":"Generation of Radioresistant Prostate Cancer Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Radiation Therapy and Dosimetry","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Radioresistance; Prostate cancer; Ionizing radiation; Cancer; Cancer research; Cancer cell lines; Radiobiology; Cancer cell; Biology; Computational biology; Medicine; Radiation therapy; Internal medicine; Irradiation; Physics","score_opus":0.05330282696234486,"score_gpt":0.4451889298782553,"score_spread":0.3918861029159105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077865","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6085497,0.003048245,0.38615575,0.0008760274,0.00049851235,0.0004308281,0.000018907025,0.00005026459,0.0003717542],"genre_scores_gemma":[0.12577765,0.0016429692,0.870282,0.0011543776,0.00012476364,0.00011044515,0.00008519414,0.000031680698,0.0007909045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990083,0.00042745366,0.00022117402,0.00016028386,0.000048304133,0.00013448039],"domain_scores_gemma":[0.99964756,0.00006927172,0.00006315184,0.00015618453,0.000033316206,0.000030499312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075777125,0.000065674976,0.00020892844,0.00021470459,0.000012552631,0.0000017894179,0.00004116364,0.000095579984,0.000065661465],"category_scores_gemma":[0.0001105004,0.000055787223,0.000049323018,0.00048293427,0.0000528817,0.000008517525,0.000012457074,0.00007829102,0.0000045131455],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005590957,0.00001909419,0.004395173,0.000022668572,0.00002872856,0.000013880443,0.00013724965,0.00022905943,0.9673084,0.000733337,0.00014882167,0.026907666],"study_design_scores_gemma":[0.00058336445,0.00011223925,0.0027589619,0.000010925546,0.00001520524,0.0000017252685,0.000016718448,0.00257554,0.99010044,0.0008765962,0.0028933159,0.000054968063],"about_ca_topic_score_codex":0.000037447862,"about_ca_topic_score_gemma":0.000003155367,"teacher_disagreement_score":0.48412627,"about_ca_system_score_codex":0.000028418966,"about_ca_system_score_gemma":0.000053767315,"threshold_uncertainty_score":0.22749369},"labels":[],"label_agreement":null},{"id":"W4377077899","doi":"10.1007/978-1-0716-3056-3_16","title":"Testing the Effects of Magnetic Hyperthermia in 2D Cell Culture","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Hyperthermia; Magnetic nanoparticles; Medicine; Cancer research; Cell culture; Magnetic hyperthermia; Oncology; Biomedical engineering; Materials science; Internal medicine; Nanoparticle; Nanotechnology; Biology","score_opus":0.013550357633409948,"score_gpt":0.304391753247616,"score_spread":0.2908413956142061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077899","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86932445,0.004231117,0.11942928,0.00009177955,0.00024048405,0.0005231052,0.0000044085295,0.00019638632,0.0059590014],"genre_scores_gemma":[0.5461861,0.00020848186,0.45298472,0.00014545169,0.000035465197,0.00025521804,0.000010788114,0.00004959846,0.00012420889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992062,0.0002688354,0.0001676283,0.00013199692,0.000029060946,0.00019629179],"domain_scores_gemma":[0.9989841,0.00075820467,0.000018129438,0.00021177731,0.000011707602,0.000016089662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003293122,0.00009641055,0.00016037036,0.00009637941,0.000016650654,0.0000037926266,0.00018531646,0.000113673945,0.0000056796403],"category_scores_gemma":[0.00029805582,0.00007023689,0.00003409356,0.0007217217,0.00005386734,0.000007007543,0.000029892004,0.00018006779,0.000010121546],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[6.392213e-7,0.000010018346,0.0017833258,0.00005655416,0.0000036422407,0.00000576923,0.00029220173,0.0011308941,0.97351396,0.0002813824,0.000014281989,0.022907322],"study_design_scores_gemma":[0.00087038474,0.00019162081,0.031267595,0.00008655221,0.00003585336,0.000015956666,0.00025311505,0.017026022,0.92197317,0.017765906,0.010102625,0.00041121215],"about_ca_topic_score_codex":0.000020432228,"about_ca_topic_score_gemma":0.0000063820994,"teacher_disagreement_score":0.33355543,"about_ca_system_score_codex":0.000012675231,"about_ca_system_score_gemma":0.0000074290215,"threshold_uncertainty_score":0.28641775},"labels":[],"label_agreement":null},{"id":"W4377077905","doi":"10.1007/978-1-0716-3056-3_15","title":"A Method for the In Vitro Cytotoxicity Assessment of Anti-cancer Compounds and Materials Using High Content Screening Analysis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Bottleneck; Protocol (science); Computer science; Drug; Cancer cell lines; Cancer; Biochemical engineering; Pharmacology; Medicine; Cancer cell; Engineering; Internal medicine; Pathology","score_opus":0.06029883955080764,"score_gpt":0.46549571176543286,"score_spread":0.4051968722146252,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077905","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41868344,0.00021012938,0.5807653,0.000049868937,0.000012226449,0.0002415939,0.000026654281,0.0000066714656,0.000004143957],"genre_scores_gemma":[0.3865981,0.00018125109,0.61286247,0.0001120906,0.000014552451,0.00011063243,0.00009969701,0.0000132098285,0.000007958589],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99724483,0.0014187958,0.00049950933,0.00048243464,0.00006916397,0.0002852679],"domain_scores_gemma":[0.9989885,0.0002756483,0.00022304899,0.000394756,0.00009134278,0.000026690639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0038889507,0.00017737203,0.0006453925,0.0004158177,0.000045169254,0.000017925688,0.00023596505,0.00019501797,0.0000049588198],"category_scores_gemma":[0.00021316677,0.00014231965,0.00018591637,0.000776122,0.00014676248,0.000003077345,0.00028944947,0.000096252035,2.7629767e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056980345,0.000027863744,0.0059972503,0.000020129048,0.0005656842,0.0000025309619,0.000013857306,0.0010160498,0.98903316,0.000101984675,0.0000030786002,0.0031614576],"study_design_scores_gemma":[0.00041480176,0.000062860614,0.009138804,0.000007771032,0.00030077205,0.0000017430975,0.000054477223,0.022485675,0.96704316,0.0002672012,0.00007790945,0.00014485217],"about_ca_topic_score_codex":0.001207256,"about_ca_topic_score_gemma":0.00008287222,"teacher_disagreement_score":0.032097206,"about_ca_system_score_codex":0.000024989851,"about_ca_system_score_gemma":0.000034231027,"threshold_uncertainty_score":0.5803627},"labels":[],"label_agreement":null},{"id":"W4377077924","doi":"10.1007/978-1-0716-3056-3_6","title":"Generation and Characterization of an Isogenic Cell Line Model of Radioresistant Esophageal Adenocarcinoma","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lung Cancer Treatments and Mutations","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Radioresistance; Cancer research; Radiosensitivity; Adenocarcinoma; Cell cycle; Cancer; Esophageal cancer; Biology; DNA damage; Radiation therapy; DNA repair; Cell; Apoptosis; Cell culture; Medicine; Gene; DNA; Internal medicine; Genetics","score_opus":0.04422042892654888,"score_gpt":0.41340245913722146,"score_spread":0.3691820302106726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077924","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69958544,0.00032500515,0.29978544,0.000055538592,0.000030197598,0.00015610206,0.000030142397,0.0000078411595,0.000024291374],"genre_scores_gemma":[0.69114894,0.0001032652,0.3081617,0.00005199252,0.000016871732,0.000017297421,0.0004121713,0.000009650502,0.00007810373],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992837,0.00020513154,0.00022100363,0.00016332114,0.000039167564,0.000087725515],"domain_scores_gemma":[0.9996817,0.00002007756,0.00007772604,0.0001435427,0.000044210592,0.00003271981],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026590686,0.00006635664,0.0002075317,0.00016420976,0.000012580483,0.0000014550101,0.000028830114,0.00008135486,0.000005165802],"category_scores_gemma":[0.00002925429,0.000057621717,0.000029901912,0.00019143782,0.000047227863,0.000017729382,0.000017471213,0.000041666888,2.5947247e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003734039,0.0000590116,0.002906628,0.00003777454,0.00002677251,0.000008689188,0.00026501785,0.00026659673,0.9898988,0.00046621787,6.0704707e-7,0.006026521],"study_design_scores_gemma":[0.00093332405,0.00039392366,0.019728683,0.000008447547,0.00010296105,0.0000043707328,0.000015558322,0.1158359,0.8623956,0.0005292392,0.0000057070597,0.000046282137],"about_ca_topic_score_codex":0.000020317293,"about_ca_topic_score_gemma":0.0000026798523,"teacher_disagreement_score":0.12750322,"about_ca_system_score_codex":0.000020254973,"about_ca_system_score_gemma":0.000059403697,"threshold_uncertainty_score":0.23497455},"labels":[],"label_agreement":null},{"id":"W4377077978","doi":"10.1007/978-1-0716-3056-3_9","title":"A Method for Culturing 3D Tumoroids of Lung Adenocarcinoma Cells at the Air–Liquid Interface","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity College","funders":"","keywords":"Adenocarcinoma; Lung cancer; Lung; Human lung; Pathology; Cancer; Cancer research; Chemistry; Biomedical engineering; Medicine; Internal medicine","score_opus":0.030688912340237615,"score_gpt":0.4351201039436568,"score_spread":0.40443119160341917,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377077978","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09295274,0.0042427406,0.9003905,0.0008034316,0.00034210517,0.0007471448,0.00003189513,0.000036430192,0.0004530171],"genre_scores_gemma":[0.01855431,0.0001922272,0.97929925,0.0005150963,0.000067757195,0.0001933398,0.000025278025,0.000041554475,0.0011111845],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977998,0.000882351,0.00041865555,0.00041753726,0.000088061934,0.00039357872],"domain_scores_gemma":[0.9986878,0.0005970304,0.0001291297,0.0004480453,0.00007328107,0.000064696724],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026157028,0.00018262737,0.0005580265,0.00017939816,0.000047046356,0.0000031140548,0.00019630087,0.000141395,0.00006767599],"category_scores_gemma":[0.0002968501,0.00012526513,0.00024065704,0.0004711735,0.00013698112,0.000010804077,0.0002679426,0.0002014037,0.000005990248],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041243716,0.000026655493,0.00026952688,0.00018846929,0.00010634205,0.000020180023,0.0004418711,0.00033114612,0.98040795,0.00026107638,0.00034854,0.017185818],"study_design_scores_gemma":[0.0009802709,0.00046805711,0.00021536982,0.00005223416,0.00015973132,0.000036318128,0.0001679838,0.0016198348,0.9718182,0.00024815407,0.024110438,0.0001234085],"about_ca_topic_score_codex":0.00013499582,"about_ca_topic_score_gemma":0.000019234483,"teacher_disagreement_score":0.078908764,"about_ca_system_score_codex":0.00010627065,"about_ca_system_score_gemma":0.000057113924,"threshold_uncertainty_score":0.51081634},"labels":[],"label_agreement":null},{"id":"W4377092737","doi":"10.1007/978-1-0716-3175-1_41","title":"Assessment of Platelet Function by High-Throughput Screening Light Transmission Aggregometry: Optimul Assay","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antiplatelet Therapy and Cardiovascular Diseases","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Montreal Heart Institute","funders":"","keywords":"Platelet; Whole blood; Platelet aggregation; Adenosine diphosphate; Chemistry; Biomedical engineering; Medicine; Surgery; Internal medicine","score_opus":0.01896618853162275,"score_gpt":0.38550219216976833,"score_spread":0.3665360036381456,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377092737","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0852384,0.0044581783,0.90891916,0.00035470634,0.00018328615,0.00032560254,0.000013731467,0.00009601044,0.00041090738],"genre_scores_gemma":[0.21464397,0.0015476785,0.782538,0.0004210429,0.00006342207,0.00005423757,0.0004593783,0.000058740294,0.00021353937],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700165,0.001498999,0.00043608353,0.00047764383,0.00022608788,0.00035951613],"domain_scores_gemma":[0.99908733,0.00021486095,0.000121017256,0.00040686634,0.00006182943,0.0001080948],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025106338,0.00022044416,0.00071219186,0.00038979316,0.000048822312,0.0000065859713,0.00012701047,0.00033078468,0.0001354532],"category_scores_gemma":[0.00014537948,0.0001879706,0.00037093976,0.000993176,0.00009643912,0.000034658,0.000054125667,0.00029452518,0.000004909984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019027707,0.000100984136,0.00270335,0.00007305115,0.00049356,0.000120096374,0.000026024854,0.0003681651,0.698055,0.0005083051,0.00019432444,0.29716685],"study_design_scores_gemma":[0.008242233,0.0018772419,0.02316104,0.0003994485,0.00060159265,0.00009534345,0.00019616885,0.006489063,0.8436011,0.0037391796,0.1109408,0.00065678096],"about_ca_topic_score_codex":0.00003203771,"about_ca_topic_score_gemma":2.770466e-7,"teacher_disagreement_score":0.29651007,"about_ca_system_score_codex":0.000037403377,"about_ca_system_score_gemma":0.000059734448,"threshold_uncertainty_score":0.7665218},"labels":[],"label_agreement":null},{"id":"W4377093435","doi":"10.1007/978-1-0716-3175-1_7","title":"Laboratory Testing of Hemostasis in Pregnancy: A Brief Overview","year":2023,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Blood Coagulation and Thrombosis Mechanisms","field":"Medicine","cited_by":10,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Lawrence College; Queen's University","funders":"","keywords":"Hemostasis; Medicine; Fibrinolysis; Pregnancy; Obstetrics; Coagulation; Population; Intensive care medicine; Surgery; Internal medicine; Biology","score_opus":0.2287371334400863,"score_gpt":0.5038958260275367,"score_spread":0.2751586925874504,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4377093435","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000066634293,0.975362,0.02296118,0.000027026315,0.00019633364,0.000995131,0.00003724696,0.000052855008,0.00036153905],"genre_scores_gemma":[6.2916513e-7,0.62449914,0.37512258,0.00011324672,0.000013967213,0.00012713973,0.000041269275,0.000056086894,0.000025940506],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9951682,0.002679574,0.0011337685,0.0005658852,0.00011344763,0.00033909656],"domain_scores_gemma":[0.99801487,0.0007829051,0.0004451849,0.0005918064,0.000096107964,0.00006911277],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018985902,0.00035044333,0.0028310625,0.00069791486,0.000012418255,0.0000040861974,0.00020684494,0.000700385,0.0000335352],"category_scores_gemma":[0.002524604,0.00030942835,0.00029215147,0.002360823,0.00008304456,0.0000123789005,0.00017986078,0.000545948,0.000010332948],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000028008537,0.000093421484,0.00009644917,0.01854604,0.00013347062,0.00012694311,0.000023283432,3.767235e-7,0.0028069525,0.0040857415,0.0000029814419,0.9740815],"study_design_scores_gemma":[0.002924074,0.00096189725,0.00017627353,0.26171133,0.0025060184,0.00013646734,0.000045549365,0.00011584143,0.011350322,0.016604403,0.70206875,0.0013990772],"about_ca_topic_score_codex":0.000049314887,"about_ca_topic_score_gemma":0.0000108789645,"teacher_disagreement_score":0.9726825,"about_ca_system_score_codex":0.00009112347,"about_ca_system_score_gemma":0.00047538424,"threshold_uncertainty_score":0.9999358},"labels":[],"label_agreement":null},{"id":"W4378551831","doi":"10.1007/7651_2023_482","title":"Establishing Brain Tumor Stem Cell Culture from Patient Brain Tumors and Imaging Analysis of Patient-Derived Xenografts","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Brain tumor; Neural stem cell; Stem cell; Pathology; Medicine; Cancer research; Population; Glioblastoma; Biology","score_opus":0.013287013435865259,"score_gpt":0.33521883646079603,"score_spread":0.3219318230249308,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378551831","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98659,0.0018254914,0.010255991,0.0006278547,0.00012726316,0.00035793323,0.00007583765,0.00004955345,0.00009007358],"genre_scores_gemma":[0.8407327,0.000035072182,0.15759803,0.0011966436,0.000016937993,0.000073563526,0.00031384177,0.000027592167,0.000005632257],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974594,0.0010150818,0.0005047699,0.0005429753,0.0001327659,0.00034499617],"domain_scores_gemma":[0.9984375,0.00077786035,0.00021779806,0.00036452137,0.00008379483,0.00011852639],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005439646,0.00022884177,0.0007602958,0.00076354377,0.00004038374,0.000019919698,0.000092721064,0.000097164244,0.000021024533],"category_scores_gemma":[0.00051303644,0.00018467355,0.00020735928,0.001549555,0.00010452872,0.00003347362,0.00017429063,0.00017158833,0.0000015173863],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041105228,0.00016257049,0.13703787,0.000026214437,0.0004246808,0.00054289284,0.0034919304,0.00011653058,0.82152617,0.000050564617,0.00015255275,0.036426887],"study_design_scores_gemma":[0.002177215,0.0006018714,0.05184952,0.00013379926,0.0010024164,0.000012003741,0.004873943,0.0035940576,0.9331932,0.000651408,0.0015695057,0.00034105204],"about_ca_topic_score_codex":0.00044867652,"about_ca_topic_score_gemma":0.00002856535,"teacher_disagreement_score":0.14734204,"about_ca_system_score_codex":0.00005301628,"about_ca_system_score_gemma":0.000028181157,"threshold_uncertainty_score":0.7530769},"labels":[],"label_agreement":null},{"id":"W4378745033","doi":"10.1007/978-1-0716-3159-1_3","title":"DNA-Barcoding Identification of Plant Pathogens for Disease Diagnostics","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Natural Resources Canada; University of British Columbia; Canadian Forest Service","funders":"","keywords":"Biology; DNA barcoding; Computational biology; Oomycete; DNA sequencing; Identification (biology); Internal transcribed spacer; genomic DNA; Organism; Genetics; Polymerase chain reaction; DNA; Pathogen; Evolutionary biology; Ribosomal RNA; Gene; Botany","score_opus":0.027950054225513176,"score_gpt":0.35917997145398906,"score_spread":0.3312299172284759,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378745033","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29041517,0.001358476,0.702079,0.000072843715,0.00027285062,0.00043217384,0.0053165746,0.000022345046,0.00003055826],"genre_scores_gemma":[0.69288176,0.0033807864,0.2877382,0.00054294296,0.00029741751,0.00083302346,0.013972241,0.00011540556,0.00023822414],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854255,0.00034619053,0.0003680669,0.00039710107,0.00005648324,0.00028963634],"domain_scores_gemma":[0.9991991,0.00019309824,0.0001231474,0.0003329675,0.00006218301,0.000089534056],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083973235,0.0001420617,0.00020665191,0.00015435724,0.0000396468,0.000007157014,0.00019860215,0.00014155585,0.0000028778527],"category_scores_gemma":[0.0017655658,0.00014094308,0.00014948082,0.00021278996,0.000082943974,0.0000017222533,0.00010848627,0.000047592228,0.0000028035274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000101279235,0.000050615174,0.008711227,0.000058424015,0.000028284276,0.000020428353,0.000010999736,0.00012377623,0.98589414,0.0015672023,0.00019309594,0.0032405339],"study_design_scores_gemma":[0.00060275523,0.00019339348,0.023484956,0.00003174467,0.000076336546,0.0000050808962,0.000047252444,0.0023212405,0.95832634,0.0055063176,0.009082761,0.00032184942],"about_ca_topic_score_codex":0.0000021559829,"about_ca_topic_score_gemma":0.000002781182,"teacher_disagreement_score":0.4143408,"about_ca_system_score_codex":0.000007970661,"about_ca_system_score_gemma":0.000056856436,"threshold_uncertainty_score":0.57474923},"labels":[],"label_agreement":null},{"id":"W4378745139","doi":"10.1007/978-1-0716-3159-1_13","title":"Quantitative Phosphoproteome Analysis of the Interaction Between Fusarium graminearum and Triticum aestivum","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Proteomics; Fusarium; Quantitative proteomics; Biology; Computational biology; Pathogen; Host (biology); Biochemistry; Botany; Ecology; Microbiology","score_opus":0.045975547521110036,"score_gpt":0.3817497828172798,"score_spread":0.33577423529616973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378745139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9893592,0.00016790278,0.0087653035,0.0010234588,0.00014096774,0.00023502909,0.00009346934,0.00002720514,0.0001874562],"genre_scores_gemma":[0.97196907,0.000048819307,0.0276036,0.00011630284,0.00003152072,0.00003608688,0.00014429296,0.0000010912821,0.0000492129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99834126,0.0008349884,0.00026738772,0.00027813212,0.00007338232,0.00020485038],"domain_scores_gemma":[0.99901235,0.0007120072,0.000119919896,0.00007849936,0.00004593074,0.00003126358],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00084626547,0.000114257164,0.00034002864,0.00007412911,0.000060511527,0.0000090531385,0.00020813225,0.00015293976,0.000016542992],"category_scores_gemma":[0.000426428,0.00003813464,0.00015123874,0.0026659074,0.00013576365,0.000024229572,0.00015378892,0.00017389673,0.0000019273655],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012354109,0.000018192706,0.038977325,0.0000035395228,0.00013019175,0.0000015953707,0.000072345036,0.000017525012,0.9405155,0.0015424166,0.0000048112042,0.018704211],"study_design_scores_gemma":[0.00013024066,0.00042568817,0.4856293,0.000009621862,0.00025043677,0.000002126898,0.0006360623,0.00060804584,0.5046984,0.0056700064,0.0017582,0.00018188197],"about_ca_topic_score_codex":0.00022118264,"about_ca_topic_score_gemma":0.00008234698,"teacher_disagreement_score":0.44665197,"about_ca_system_score_codex":0.000012227891,"about_ca_system_score_gemma":0.000003028388,"threshold_uncertainty_score":0.15550855},"labels":[],"label_agreement":null},{"id":"W4378745577","doi":"10.1007/978-1-0716-3139-3_11","title":"Spermatogonial Transplantation","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"Transplantation; Biology; Spermatogenesis; Stem cell; Cell biology; Immunology; Medicine; Internal medicine; Endocrinology","score_opus":0.031712848210355186,"score_gpt":0.4144822237983683,"score_spread":0.3827693755880131,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378745577","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27412355,0.00009402181,0.7224185,0.00046172505,0.0003424688,0.00015915904,0.0000022372594,0.000111630245,0.0022867345],"genre_scores_gemma":[0.14088912,0.00017148507,0.8572623,0.0009995477,0.00012012873,0.00004982426,0.00025424836,0.000029233282,0.00022410824],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991636,0.0002825816,0.00014943605,0.00018370197,0.00004729901,0.00017333918],"domain_scores_gemma":[0.99969184,0.00009713448,0.000019638472,0.00013394115,0.000019633688,0.0000378074],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049988175,0.00007449387,0.0001598368,0.00021446777,0.000016292608,0.0000028344546,0.000034195087,0.00012042293,0.000077322016],"category_scores_gemma":[0.00024501173,0.00006543329,0.00005771978,0.00032075326,0.000040803316,0.0000104560295,0.000010904526,0.00011444199,0.00008224591],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006011353,0.000022487928,0.018363394,0.000031580228,0.00001615218,0.00037170798,0.00011305147,0.000020066784,0.9537191,0.002430008,0.000034983546,0.024817387],"study_design_scores_gemma":[0.003786734,0.0005131625,0.1640372,0.00007240246,0.0001674545,0.00092605874,0.00009691831,0.005038779,0.7972616,0.01734448,0.010425272,0.0003299316],"about_ca_topic_score_codex":0.000021530921,"about_ca_topic_score_gemma":0.0000030414542,"teacher_disagreement_score":0.15645745,"about_ca_system_score_codex":0.000019186497,"about_ca_system_score_gemma":0.000024694862,"threshold_uncertainty_score":0.26682922},"labels":[],"label_agreement":null},{"id":"W4378745892","doi":"10.1007/978-1-0716-3159-1_7","title":"Transfection of Barley Leaf Protoplasts with a Fluorescently Tagged Fungal Effector for In Planta Localization Studies in Barley","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Agriculture and Agri-Food Canada","funders":"","keywords":"Effector; Biology; Protoplast; Ustilago; Cell biology; Hordeum vulgare; Host (biology); Pathogen; Green fluorescent protein; Transfection; Gene; Microbiology; Botany; Genetics; Poaceae","score_opus":0.04437056419620403,"score_gpt":0.3678071802494371,"score_spread":0.32343661605323304,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378745892","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9787708,0.0001274226,0.019583454,0.000090773545,0.00013440935,0.0011967905,0.00005588042,0.000022087272,0.0000183608],"genre_scores_gemma":[0.9861719,0.0001395922,0.012734567,0.000053573283,0.000022379625,0.00065858423,0.00020122032,0.0000026462571,0.000015516993],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99814683,0.0010247832,0.00029048775,0.00024690304,0.00004345354,0.00024753035],"domain_scores_gemma":[0.99915975,0.0006644972,0.00006218477,0.000049563638,0.000045552813,0.000018473344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010784924,0.00012335906,0.00030364335,0.00011721405,0.000040882238,0.000006557894,0.000112858914,0.00012907817,0.00000825577],"category_scores_gemma":[0.0003123835,0.000055547167,0.000048633818,0.00073227874,0.00007834002,0.000041784748,0.000031183878,0.00015650762,0.0000013813519],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00037766146,0.00008596157,0.043376245,0.000052361804,0.000017565873,0.000010550513,0.00015256522,0.00019034719,0.94010955,0.00004905562,0.000014711559,0.015563449],"study_design_scores_gemma":[0.0013661955,0.0016753644,0.11699224,0.0003592588,0.000014607306,0.000029399383,0.00067115074,0.0020458144,0.8745804,0.00073397765,0.0012644234,0.00026719293],"about_ca_topic_score_codex":0.0005050732,"about_ca_topic_score_gemma":0.0044133426,"teacher_disagreement_score":0.073616,"about_ca_system_score_codex":0.000045180073,"about_ca_system_score_gemma":0.000009772873,"threshold_uncertainty_score":0.24627486},"labels":[],"label_agreement":null},{"id":"W4378746019","doi":"10.1007/978-1-0716-3159-1_8","title":"A Bioinformatic Guide to Identify Protein Effectors from Phytopathogens","year":2023,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; University of Toronto","funders":"","keywords":"Effector; Biology; Computational biology; Host (biology); Fungus; Secondary metabolism; Immune system; Biotechnology; Genetics; Biochemistry; Gene; Botany; Biosynthesis","score_opus":0.06609187133231885,"score_gpt":0.44119785891780033,"score_spread":0.37510598758548147,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746019","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.005776748,0.97064054,0.017737135,0.00008143622,0.0010937238,0.0028810396,0.0012581692,0.00019880237,0.000332396],"genre_scores_gemma":[0.000003895557,0.7828907,0.2134444,0.00023491244,0.00020425506,0.00096895813,0.0018185228,0.00001192415,0.0004224324],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952267,0.0028470578,0.00088492763,0.00050043233,0.00007826038,0.00046261598],"domain_scores_gemma":[0.9981732,0.0011671287,0.00029385678,0.00022773255,0.00003778776,0.00010029742],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014642142,0.00041438622,0.0013693542,0.00014409935,0.00008970861,0.00006313927,0.00076604605,0.00050537754,0.00015914347],"category_scores_gemma":[0.0010470714,0.00016610816,0.00049210765,0.0010589692,0.000049041297,0.000038263934,0.0004415592,0.0005447502,0.0005631235],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000026689906,0.000020212552,0.0000032582657,0.0002684028,0.000048421603,0.00002138283,0.000010775712,1.8360024e-7,0.3264234,0.000016020389,0.000088060304,0.6730972],"study_design_scores_gemma":[0.000046736473,0.00013581188,0.000071471455,0.0031921251,0.000086600296,0.000020725649,0.000027262073,0.000004649113,0.0029145107,0.000384795,0.9927142,0.00040108676],"about_ca_topic_score_codex":0.001280913,"about_ca_topic_score_gemma":0.00034485414,"teacher_disagreement_score":0.9926262,"about_ca_system_score_codex":0.000102653845,"about_ca_system_score_gemma":0.000029376712,"threshold_uncertainty_score":0.72380006},"labels":[],"label_agreement":null},{"id":"W4378746022","doi":"10.1007/978-1-0716-3159-1_16","title":"Eliciting Targeted Mutations in Medicago sativa Using CRISPR/Cas9-Mediated Genome Editing: A Potential Tool for the Improvement of Disease Resistance","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Agriculture and Agri-Food Canada","funders":"","keywords":"CRISPR; Biology; Genome editing; Cas9; Genetics; Subgenomic mRNA; Medicago sativa; Computational biology; Plant disease resistance; Indel; Gene; Genotype; Botany","score_opus":0.015794756109579304,"score_gpt":0.4033028032016977,"score_spread":0.3875080470921184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746022","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30823687,0.0010704058,0.6897863,0.00023833591,0.00017912521,0.00040568135,0.0000651003,0.000010764477,0.0000074200393],"genre_scores_gemma":[0.7652022,0.00011995172,0.23371075,0.00015888327,0.00016079623,0.0002184055,0.00036948067,0.000037320777,0.00002220106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984553,0.0002445794,0.0004637528,0.00037077945,0.000087668814,0.00037795666],"domain_scores_gemma":[0.99924755,0.00020096218,0.000120670855,0.00030401393,0.00007416612,0.000052622396],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012087347,0.0001603603,0.00022084703,0.00016746185,0.000057915706,0.0000074297664,0.00021933773,0.00013926,0.0000059324275],"category_scores_gemma":[0.0018480833,0.00014258098,0.00011214001,0.00039799273,0.000115575,0.0000021197927,0.00013908865,0.00012010059,3.82994e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006526562,0.000020661748,0.00035988982,0.00005362042,0.000042383344,0.000007606862,0.000077919285,0.0129819885,0.98368376,0.00006673839,0.00001424577,0.0026258917],"study_design_scores_gemma":[0.0015911177,0.00018474607,0.005172534,0.000056856214,0.00007473995,0.0000025031022,0.00051619904,0.036693107,0.95009667,0.002719993,0.0025211442,0.0003704026],"about_ca_topic_score_codex":0.000028755405,"about_ca_topic_score_gemma":0.000032340155,"teacher_disagreement_score":0.45696536,"about_ca_system_score_codex":0.000024528144,"about_ca_system_score_gemma":0.00008468437,"threshold_uncertainty_score":0.58142835},"labels":[],"label_agreement":null},{"id":"W4378746028","doi":"10.1007/978-1-0716-3159-1_9","title":"Unraveling Plant-Pathogen Interactions in Cereals Using RNA-seq","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canadian International Grains Institute; Agriculture and Agri-Food Canada; Queen's University","funders":"","keywords":"RNA-Seq; Gene; Biology; Transcriptome; Computational biology; Host (biology); Genetics; Gene expression; Pathogen; Biotechnology","score_opus":0.08630416148865454,"score_gpt":0.40958867467519233,"score_spread":0.3232845131865378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746028","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.989805,0.00041331697,0.008595621,0.0002701338,0.00019090412,0.00013897724,0.00017506522,0.000041734238,0.0003692621],"genre_scores_gemma":[0.6830113,0.001082695,0.3129945,0.0011189863,0.0003106358,0.00008976858,0.001189945,0.00000811164,0.00019404912],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984341,0.0006401753,0.00024564692,0.00028697148,0.000052935735,0.0003401526],"domain_scores_gemma":[0.99946076,0.00035866007,0.00005280239,0.00005932931,0.000015835316,0.000052591084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006392142,0.00011192269,0.00020278551,0.0000754454,0.000050279898,0.000013786867,0.00017052086,0.00009517112,0.000045962315],"category_scores_gemma":[0.00016738243,0.000054741493,0.000065943284,0.0007021337,0.000035571204,0.000019987798,0.00008276836,0.00013758939,0.000013787943],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014680211,0.000018447616,0.0071625747,0.0000037255547,0.000006154645,0.00008105963,0.000025704672,0.00027401533,0.96915805,0.00020245435,0.0000117774225,0.023041334],"study_design_scores_gemma":[0.0012055557,0.00032037747,0.23429565,0.000427752,0.00008358657,0.00013384785,0.0022406953,0.036821004,0.57147706,0.09923784,0.05180387,0.001952778],"about_ca_topic_score_codex":0.00029077288,"about_ca_topic_score_gemma":0.0010502648,"teacher_disagreement_score":0.39768103,"about_ca_system_score_codex":0.000030805142,"about_ca_system_score_gemma":0.000012637943,"threshold_uncertainty_score":0.22322932},"labels":[],"label_agreement":null},{"id":"W4378746049","doi":"10.1007/978-1-0716-3159-1_12","title":"Proteomic Profiling of Host Response in the Cereal Crop Triticum aestivum to the Mycotoxin, 15-Acetyldeoxynivalenol, Produced by the Fungal Pathogen, Fusarium graminearum","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Fusarium; Mycotoxin; Biology; Biotechnology; Host (biology); Computational biology; Agronomy; Botany; Genetics","score_opus":0.028249995838937263,"score_gpt":0.3321273801731698,"score_spread":0.3038773843342325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746049","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.977204,0.0005444074,0.0012462593,0.017866913,0.00023024897,0.0025134413,0.00023923702,0.000048618447,0.0001068322],"genre_scores_gemma":[0.979741,0.00008391467,0.016446872,0.001855812,0.0002558285,0.0012833385,0.00018214674,0.000007967384,0.00014315352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99154556,0.0064125946,0.00054196944,0.0006102677,0.00023036174,0.00065927196],"domain_scores_gemma":[0.9980573,0.0012951201,0.00015681318,0.00034848164,0.00008725356,0.000055022632],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0075484645,0.00028356686,0.00038200917,0.000054144304,0.00021458043,0.000040457457,0.00124291,0.0002676652,0.000012884059],"category_scores_gemma":[0.0019759724,0.00007818473,0.00015560744,0.0021604989,0.00023113759,0.00003020544,0.00030339474,0.00056373695,0.00001740621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00034244102,0.00009594082,0.0014816857,0.000009568673,0.000014983695,0.000018827253,0.00039756182,0.000018495553,0.9907783,0.00042713564,0.00026262813,0.00615238],"study_design_scores_gemma":[0.00027426527,0.0011737448,0.036374934,0.000017639264,0.000019752117,0.00003127493,0.00091093604,0.00005909171,0.94820386,0.00063751446,0.012031081,0.0002659264],"about_ca_topic_score_codex":0.00015137187,"about_ca_topic_score_gemma":0.000061317725,"teacher_disagreement_score":0.042574514,"about_ca_system_score_codex":0.000032929245,"about_ca_system_score_gemma":0.00002725747,"threshold_uncertainty_score":0.31882805},"labels":[],"label_agreement":null},{"id":"W4378746315","doi":"10.1007/978-1-0716-3159-1_10","title":"RNA-Seq Data Processing in Plant-Pathogen Interaction System: A Case Study","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Disease Resistance and Genetics","field":"Agricultural and Biological Sciences","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; Brock University; National Research Council Canada","funders":"","keywords":"Genome; Biology; Computational biology; Host (biology); Reference genome; Phylogenetic tree; Genetics; Gene; Pathogen","score_opus":0.10747354066694015,"score_gpt":0.42105698635434907,"score_spread":0.3135834456874089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746315","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99661523,0.000510642,0.0019438859,0.00008593159,0.00012983035,0.0003276598,0.00021565559,0.00006294532,0.00010821641],"genre_scores_gemma":[0.9869881,0.000045769855,0.01220932,0.000064108775,0.000060722083,0.000056699566,0.0005596382,0.000001863066,0.000013770259],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9977512,0.0011527644,0.00028073645,0.00046199013,0.00006904688,0.0002842779],"domain_scores_gemma":[0.9995381,0.00018343604,0.000071810675,0.00014191275,0.000017128035,0.000047607446],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013716373,0.00012140285,0.00022633403,0.00006369577,0.000060823942,0.000026644795,0.00032390925,0.00010460817,0.0000068577706],"category_scores_gemma":[0.00014226112,0.000055995075,0.00002740978,0.0007089756,0.00002586176,0.000045719633,0.00023260977,0.00013631498,0.000008658014],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004749939,0.00012313803,0.017698469,0.0000346793,0.000010180169,0.008835915,0.00016612574,0.000040391453,0.83058757,0.00002400749,0.00002501388,0.14240704],"study_design_scores_gemma":[0.008117119,0.0050245486,0.32495305,0.0022061372,0.00070001814,0.01596968,0.29986855,0.21205766,0.06767884,0.00877672,0.047679923,0.006967752],"about_ca_topic_score_codex":0.0006569672,"about_ca_topic_score_gemma":0.0038427098,"teacher_disagreement_score":0.7629087,"about_ca_system_score_codex":0.00003083011,"about_ca_system_score_gemma":0.000014483424,"threshold_uncertainty_score":0.22834128},"labels":[],"label_agreement":null},{"id":"W4378746377","doi":"10.1007/978-1-0716-3159-1_1","title":"Specific Detection and Quantification of Major Fusarium spp. Associated with Cereal and Pulse Crops","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Fungal Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Fusarium; Biology; Isolation (microbiology); Biotechnology; Agronomy; Botany; Microbiology","score_opus":0.021005129784210604,"score_gpt":0.31921993512975216,"score_spread":0.29821480534554157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746377","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8223179,0.0010726613,0.17605123,0.00002865636,0.00005929591,0.00015011107,0.00016532636,0.0000132726445,0.00014152215],"genre_scores_gemma":[0.97519755,0.00052024436,0.02373139,0.000034796383,0.00002111959,0.00002341352,0.00040957387,0.000017362563,0.000044567096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988029,0.00043893495,0.00018121433,0.00035208536,0.00004258172,0.00018227055],"domain_scores_gemma":[0.9995866,0.000056552235,0.00008710897,0.00017491015,0.000048331167,0.000046516954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005377502,0.00011954122,0.00018078802,0.00011616171,0.000035843183,0.000008976118,0.000063552725,0.000183205,0.000003218382],"category_scores_gemma":[0.00022710337,0.00010524199,0.000030218589,0.00022725556,0.00015290311,0.0000021632638,0.00006647066,0.00006909497,8.1739773e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000114352355,0.000027620335,0.014657877,0.000014238373,0.00003537801,0.000010496845,0.00001054384,0.00001168124,0.9760618,0.00015934442,0.000006023066,0.008890606],"study_design_scores_gemma":[0.00052147295,0.00033103017,0.20244208,0.000012126997,0.00002683144,0.0000189579,0.000038824943,0.00028292762,0.7951848,0.0004884699,0.0004947365,0.00015776293],"about_ca_topic_score_codex":0.000028115499,"about_ca_topic_score_gemma":0.00004218453,"teacher_disagreement_score":0.1877842,"about_ca_system_score_codex":0.0000061112355,"about_ca_system_score_gemma":0.000016821754,"threshold_uncertainty_score":0.42916438},"labels":[],"label_agreement":null},{"id":"W4378746455","doi":"10.1007/978-1-0716-3159-1_2","title":"Distinguishing Puccinia striiformis f. sp. tritici Isolates Using Genomic Sequencing: A Case Study","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Puccinia striiformis; Identification (biology); DNA sequencing; Genetics; Computational biology; Fungal pathogen; Pathogen; Rust (programming language); Puccinia; Stripe rust; Gene; Botany; Plant disease resistance; Computer science","score_opus":0.09907055846014742,"score_gpt":0.3931477736521793,"score_spread":0.2940772151920319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746455","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9938824,0.000287824,0.004940538,0.0001375836,0.00022259411,0.0003300581,0.000019687292,0.00006835654,0.000110918045],"genre_scores_gemma":[0.91477925,0.000025030393,0.084856726,0.00013974683,0.000121627534,0.000021402155,0.000030009962,0.000003341231,0.000022863827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99747247,0.0010875475,0.00038838567,0.00048443826,0.000050599425,0.0005165882],"domain_scores_gemma":[0.99927396,0.0004135392,0.00008128469,0.00010790958,0.00004365355,0.00007967906],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017677513,0.00019514497,0.00035212043,0.00007021729,0.00019258152,0.000043215554,0.000236402,0.00019496334,0.000047717993],"category_scores_gemma":[0.00026304755,0.00009200058,0.00009656983,0.000720636,0.00007035045,0.000020512278,0.00021610645,0.00021873126,0.000007586537],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009338416,0.000042313266,0.021984603,0.0000044752333,0.000013668653,0.0017294626,0.00027776608,0.0000673698,0.9464113,0.00005330085,0.0000039692777,0.02940243],"study_design_scores_gemma":[0.0072022635,0.014987273,0.09645824,0.00023758935,0.0006524358,0.021966245,0.08593214,0.09977647,0.566179,0.08415099,0.015664384,0.0067930026],"about_ca_topic_score_codex":0.0018635369,"about_ca_topic_score_gemma":0.00062359724,"teacher_disagreement_score":0.38023233,"about_ca_system_score_codex":0.000044463835,"about_ca_system_score_gemma":0.000019139443,"threshold_uncertainty_score":0.37516746},"labels":[],"label_agreement":null},{"id":"W4378746621","doi":"10.1007/978-1-0716-3159-1_11","title":"Differential Expression Feature Extraction (DEFE): A Case Study in Wheat FHB RNA-Seq Data Analysis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada; National Research Council Canada","funders":"","keywords":"Gene; Cluster analysis; Similarity (geometry); Biology; Hierarchical clustering; Expression (computer science); RNA-Seq; Gene expression; DNA microarray; Genetics; Computational biology; Data mining; Pattern recognition (psychology); Artificial intelligence; Computer science; Transcriptome","score_opus":0.05869204192028923,"score_gpt":0.4233451483123546,"score_spread":0.3646531063920654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746621","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8315174,0.0002191425,0.16753379,0.00008163853,0.00019551872,0.00022792326,0.00007123829,0.000019268127,0.00013410435],"genre_scores_gemma":[0.9371407,0.00014347321,0.061241012,0.00007780589,0.00007879033,0.00002463404,0.00092769763,0.000015130221,0.00035077293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972769,0.001162284,0.000273592,0.00084011414,0.000093431285,0.00035369414],"domain_scores_gemma":[0.998928,0.00006283129,0.00008609621,0.0008237267,0.000030166113,0.00006914105],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009508305,0.00020844715,0.00035753567,0.00045197367,0.00008091068,0.00002743707,0.00040312245,0.00032622067,0.00003988209],"category_scores_gemma":[0.0002226534,0.00018732465,0.00010633159,0.0007082754,0.00005098118,0.0000043235605,0.0006536928,0.0002224769,0.0000044470803],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074150375,0.00018048749,0.041587938,0.000009613559,0.00015798285,0.0011951347,0.00014156841,0.00032071644,0.95097053,0.000006953835,0.0003278112,0.005027102],"study_design_scores_gemma":[0.010368291,0.002863627,0.107788965,0.000118286735,0.0017868665,0.0013733812,0.017669352,0.022108948,0.8082787,0.0013041083,0.023270795,0.003068678],"about_ca_topic_score_codex":0.00051707606,"about_ca_topic_score_gemma":0.00057766837,"teacher_disagreement_score":0.14269184,"about_ca_system_score_codex":0.000012139683,"about_ca_system_score_gemma":0.00003167436,"threshold_uncertainty_score":0.76388776},"labels":[],"label_agreement":null},{"id":"W4378746703","doi":"10.1007/978-1-0716-3159-1_5","title":"Selective Quantification of Chemotropic Responses of Fusarium graminearum","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Ottawa; Queen's University","funders":"","keywords":"Biology; Fusarium oxysporum; Organism; Fusarium; Model organism; Computational biology; Microbiology; Botany; Biochemistry; Genetics; Gene","score_opus":0.050764785704355886,"score_gpt":0.3768803217255418,"score_spread":0.3261155360211859,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378746703","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9901433,0.000055937926,0.009123744,0.00027409144,0.00010218897,0.00009338452,0.000055627588,0.000018266228,0.00013344135],"genre_scores_gemma":[0.9769684,0.000044526652,0.022658518,0.000025962192,0.000009674958,0.000009459013,0.00019819985,7.209424e-7,0.0000845607],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985692,0.00085600413,0.00024253705,0.00014757193,0.000033028795,0.00015167859],"domain_scores_gemma":[0.9992782,0.0004781636,0.00008665567,0.00006907109,0.0000745189,0.000013416535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000745755,0.000065754575,0.00018515624,0.00006127018,0.000029774763,0.0000030752813,0.00015762035,0.00009901071,0.000018132689],"category_scores_gemma":[0.00045265877,0.000027098047,0.00006072278,0.0005451954,0.000089483074,0.00001704546,0.00006262221,0.00010610771,0.000005433382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046366167,0.000043758817,0.002291096,0.000005274291,0.000010288723,8.129497e-7,0.000037666046,0.000003948346,0.976024,0.00031508468,0.0000067026062,0.021215001],"study_design_scores_gemma":[0.00005161057,0.00016687863,0.07026703,0.000004452247,0.0000034821446,0.0000027642047,0.00010043182,0.0000714466,0.9267407,0.0016423762,0.00089861837,0.000050212577],"about_ca_topic_score_codex":0.00047242554,"about_ca_topic_score_gemma":0.000031527987,"teacher_disagreement_score":0.06797594,"about_ca_system_score_codex":0.000010693182,"about_ca_system_score_gemma":0.000006287564,"threshold_uncertainty_score":0.11050263},"labels":[],"label_agreement":null},{"id":"W4378805240","doi":"10.1007/978-1-0716-3247-5_12","title":"Real-Time Monitoring of Hydrogen Peroxide Levels in Yeast and Mammalian Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Hydrogen peroxide; Yeast; Cell biology; Cell signaling; Chemistry; Biology; Signal transduction; Biochemistry","score_opus":0.02557496010394638,"score_gpt":0.37446575382140157,"score_spread":0.3488907937174552,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378805240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99259686,0.0004412898,0.006219167,0.000043066564,0.00011199044,0.00016180828,0.0000319815,0.000011944821,0.00038186405],"genre_scores_gemma":[0.7936536,0.0006141703,0.20518784,0.00003152979,0.00006516049,0.000041662057,0.0000709941,0.000031740532,0.00030327126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978148,0.0009895653,0.00033127092,0.0004707963,0.000041979587,0.0003515869],"domain_scores_gemma":[0.99945945,0.00006621132,0.00009003971,0.0003018249,0.00003057496,0.000051921732],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010368662,0.00017812106,0.00032219998,0.00020634304,0.00002294892,0.00000360319,0.00021276437,0.000370477,0.000010727943],"category_scores_gemma":[0.00019824471,0.00017347839,0.000066366956,0.00029314443,0.0002450702,0.0000025189158,0.00023606037,0.00013568327,0.000006647341],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003826569,0.000018913746,0.043555185,0.000016515158,0.000026029149,0.000023975956,0.0000591759,0.000055362332,0.9516846,0.00010225729,0.0000067347596,0.004412976],"study_design_scores_gemma":[0.0004081889,0.0001531596,0.045472365,0.000018912582,0.0000060392717,0.0000062683066,0.00008278542,0.00003327109,0.952469,0.00080663984,0.0003829163,0.00016049386],"about_ca_topic_score_codex":0.00008014768,"about_ca_topic_score_gemma":0.0000106292655,"teacher_disagreement_score":0.19896866,"about_ca_system_score_codex":0.000011604991,"about_ca_system_score_gemma":0.000032920412,"threshold_uncertainty_score":0.70742434},"labels":[],"label_agreement":null},{"id":"W4378879349","doi":"10.1007/978-1-0716-3243-7","title":"Bacterial Pathogenesis","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Infections and bacterial resistance","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, San Diego; Karolinska Institutet; School of Medicine, Emory University; Lunds Universitet; Maurice Wilkins Centre for Molecular Biodiscovery; Uppsala Universitet; Biocruces Bizkaia es el Instituto de Investigación Sanitaria; University of Warwick; Science for Life Laboratory; Emory University; Ikerbasque, Basque Foundation for Science; York University","keywords":"Pathogenesis; Biology; Microbiology; Immunology","score_opus":0.016829792546744996,"score_gpt":0.35496547099758224,"score_spread":0.33813567845083725,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378879349","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0075529753,0.0031569418,0.7782248,0.00014694191,0.009411861,0.0013822212,0.0006858499,0.00017771908,0.19926067],"genre_scores_gemma":[0.000075703494,0.0013344701,0.30963466,0.00039466828,0.0019374946,0.00026995767,0.0034623037,0.00032205635,0.68256867],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971655,0.000834629,0.000513844,0.0009030137,0.00008199099,0.0005010292],"domain_scores_gemma":[0.9987775,0.00007311217,0.0002099815,0.0007688958,0.00009289904,0.0000775753],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009963783,0.00044317523,0.0005765636,0.0002589835,0.00005928029,0.00002719889,0.00039134765,0.0014001173,0.0001154587],"category_scores_gemma":[0.00050203165,0.00045207006,0.00031382212,0.00015708343,0.0001849182,0.0000013458694,0.0003478961,0.00029764647,0.000067815075],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086510794,0.000022508155,0.000030940322,0.0000367976,0.00008882519,0.000040820956,0.0000044097646,0.000005234196,0.983091,0.0022426748,0.0025618915,0.011788395],"study_design_scores_gemma":[0.0004587547,0.00030392202,0.00010571801,0.000052037052,0.000047172096,0.000018801613,0.000002561616,0.0000030884717,0.15275753,0.009790537,0.8358374,0.0006224594],"about_ca_topic_score_codex":0.000011135653,"about_ca_topic_score_gemma":0.00007391953,"teacher_disagreement_score":0.8332755,"about_ca_system_score_codex":0.00008824057,"about_ca_system_score_gemma":0.00039447672,"threshold_uncertainty_score":0.9998963},"labels":[],"label_agreement":null},{"id":"W4378953123","doi":"10.1007/7651_2023_490","title":"Whole-Mount RNA, Single-Molecule RNA (smRNA), and DNA Fluorescence In Situ Hybridization (FISH) in Mammalian Embryos","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"RNA; Biology; DNA; Fluorescence in situ hybridization; In situ hybridization; Hybridization probe; Molecular biology; Computational biology; Gene; Gene expression; Chromosome; Genetics","score_opus":0.025908392617667676,"score_gpt":0.37233248212201814,"score_spread":0.34642408950435044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4378953123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9721402,0.0007337938,0.024992438,0.00058390107,0.00015602061,0.0005625816,0.000018088525,0.000027616816,0.0007853796],"genre_scores_gemma":[0.9599244,0.00020056532,0.03874261,0.00038904345,0.000060477596,0.00012527453,0.00023767054,0.00006361483,0.00025635707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958031,0.0017728932,0.00051559374,0.0009377608,0.00016026695,0.0008103935],"domain_scores_gemma":[0.9990484,0.00012672007,0.00007639964,0.0005414575,0.00007508755,0.00013190207],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018402033,0.00030130675,0.00039922798,0.0006690347,0.00004692673,0.00004171611,0.0003564789,0.0004202687,0.000010221073],"category_scores_gemma":[0.0012439757,0.00032940926,0.000085255524,0.0011601661,0.0002466796,0.000010100521,0.00055934506,0.00039070743,0.000017974286],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090032016,0.00007941169,0.003290519,0.000045168676,0.000013878582,0.00027141022,0.00007035825,0.000061879975,0.97366524,0.00015268524,0.00005129983,0.022208136],"study_design_scores_gemma":[0.0010693172,0.00039357878,0.013868191,0.000045305886,0.000005938544,0.000033963654,0.00008093618,0.00080125185,0.9795137,0.00076490775,0.0030444297,0.0003784587],"about_ca_topic_score_codex":0.00017515995,"about_ca_topic_score_gemma":0.001097198,"teacher_disagreement_score":0.021829676,"about_ca_system_score_codex":0.0001156112,"about_ca_system_score_gemma":0.0001110908,"threshold_uncertainty_score":0.9999158},"labels":[],"label_agreement":null},{"id":"W4379472443","doi":"10.1007/978-1-0716-3251-2_1","title":"Focused Engineering of Pyrrolysyl-tRNA Synthetase-Based Orthogonal Translation Systems for the Incorporation of Various Noncanonical Amino Acids","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Genetic code; Amino acid; Computational biology; Proteome; Archaea; Translation (biology); Biology; Transfer RNA; Biochemistry; Synthetic biology; Aminoacyl tRNA synthetase; Methanosarcina; Gene; RNA; Messenger RNA","score_opus":0.031116577468375893,"score_gpt":0.3329481721998298,"score_spread":0.30183159473145393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379472443","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06648148,0.0012743025,0.9312548,0.00008762237,0.00022310992,0.0005929471,0.00005387346,0.000013329283,0.000018516654],"genre_scores_gemma":[0.7043615,0.00006755789,0.29507336,0.000025834428,0.000046408477,0.00025752943,0.00013106647,0.000028446131,0.000008307614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99830776,0.00060706545,0.0004776961,0.00029347424,0.0000926802,0.00022132733],"domain_scores_gemma":[0.9988078,0.0005121235,0.00020710158,0.00036248064,0.000080603815,0.00002990169],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021364999,0.00015721892,0.00031342145,0.00014266113,0.000031197775,0.0000060687353,0.0002453192,0.0003065348,0.0000031379384],"category_scores_gemma":[0.00061271875,0.00012717975,0.00017366598,0.00026623288,0.000085962994,0.0000023341884,0.00003669642,0.000077869016,4.874345e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015565325,0.000026248468,0.00022811303,0.00008495661,0.000056386183,0.0000014287479,0.000016892584,0.014241911,0.9700613,0.002263839,0.000003218793,0.012860046],"study_design_scores_gemma":[0.0005848183,0.00037157428,0.00018759229,0.00003086356,0.000044470882,0.000002680386,0.000012439322,0.030313278,0.96653086,0.00065036357,0.0011373768,0.0001337006],"about_ca_topic_score_codex":0.000024532195,"about_ca_topic_score_gemma":0.00000963887,"teacher_disagreement_score":0.63788,"about_ca_system_score_codex":0.00000998283,"about_ca_system_score_gemma":0.000120244506,"threshold_uncertainty_score":0.518624},"labels":[],"label_agreement":null},{"id":"W4379509235","doi":"10.1007/7651_2023_487","title":"Single-Cell mRNA-sncRNA Co-sequencing of Preimplantation Embryos","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Hospital; University of Toronto; Université de Montréal; CReATe Fertility Centre; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Biology; Computational biology; RNA; Embryo; Embryonic stem cell; Cell; Deep sequencing; Genetics; Single-cell analysis; Cell biology; Gene; Genome","score_opus":0.044352769008079246,"score_gpt":0.3622381608149417,"score_spread":0.3178853918068625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379509235","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6448286,0.0003214267,0.35241765,0.000029041086,0.00026633992,0.00018376943,0.000022504088,0.000027222684,0.0019034564],"genre_scores_gemma":[0.71099186,0.00019826218,0.2876694,0.0002638962,0.00009034209,0.000037354697,0.00042747497,0.000054276417,0.0002671432],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99792653,0.0007065742,0.0004495073,0.0004559424,0.00008499439,0.00037644675],"domain_scores_gemma":[0.9992726,0.0000904137,0.00014863459,0.00036389538,0.00006543849,0.00005902758],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000928865,0.00020079355,0.00030918338,0.00021520973,0.0000382095,0.000009303188,0.00027443698,0.00034552367,0.000012903714],"category_scores_gemma":[0.00024745622,0.00020477772,0.00013538466,0.00033068453,0.00014484828,0.0000031081706,0.00007452066,0.00015550142,0.000008786276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000074369695,0.000053813204,0.003894713,0.00005099393,0.000028023247,0.000015730147,0.00009813174,0.00031381904,0.9887203,0.00017517488,0.000054217777,0.00652069],"study_design_scores_gemma":[0.00066850253,0.00039569507,0.0003901172,0.000016391672,0.00001674106,0.000015429472,0.00008017013,0.00038531504,0.99484926,0.0009592356,0.0020074274,0.00021568405],"about_ca_topic_score_codex":0.00007248351,"about_ca_topic_score_gemma":0.000019797484,"teacher_disagreement_score":0.06616328,"about_ca_system_score_codex":0.000029327279,"about_ca_system_score_gemma":0.00008680904,"threshold_uncertainty_score":0.83505934},"labels":[],"label_agreement":null},{"id":"W4379598828","doi":"10.1007/7651_2023_488","title":"Guinea Pig Preimplantation Embryos: Generation, Collection, and Immunofluorescence","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Biology; Guinea pig; Embryo; Mating; Embryo culture; Estrous cycle; New guinea; Embryogenesis; Andrology; Cell biology; Zoology; Genetics; Medicine","score_opus":0.04671366634412005,"score_gpt":0.42059031863458635,"score_spread":0.3738766522904663,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4379598828","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6089961,0.0012377553,0.3868529,0.0013180157,0.00048140547,0.00046586458,0.0000047457224,0.00008644697,0.00055678055],"genre_scores_gemma":[0.2284977,0.0007792884,0.76698357,0.0012007784,0.00024729935,0.0002294382,0.00040827258,0.000028904678,0.0016247539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982425,0.00087814726,0.0002496976,0.00041254918,0.000036916772,0.00018017225],"domain_scores_gemma":[0.99943215,0.000102157544,0.000048505168,0.000258508,0.00012367977,0.000035015128],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014755091,0.00009995929,0.00022025526,0.00018844477,0.00006968204,0.000004988097,0.000049152368,0.0001802163,0.00002506738],"category_scores_gemma":[0.0014574799,0.00008570093,0.000031671665,0.0004914359,0.0001766171,0.00002052736,0.00004642125,0.00015177796,0.000011969995],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026190272,0.000023604676,0.033387005,0.000015454667,0.000029883635,0.000015206356,0.00013540965,0.0000038540343,0.9551435,0.00050063187,0.00038980105,0.010093713],"study_design_scores_gemma":[0.0008211068,0.00036224848,0.4768767,0.000012496032,0.000033097655,0.0001486315,0.000053359337,0.001644067,0.511226,0.006201332,0.0024784002,0.0001425452],"about_ca_topic_score_codex":0.000038344606,"about_ca_topic_score_gemma":0.0000055856763,"teacher_disagreement_score":0.4439175,"about_ca_system_score_codex":0.000030317258,"about_ca_system_score_gemma":0.00004823791,"threshold_uncertainty_score":0.34947824},"labels":[],"label_agreement":null},{"id":"W43799683","doi":"10.1007/978-1-59745-365-3_4","title":"Isolation and Functional Analysis of Mitochondria From the Nematode Caenorhabditis elegans","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Caenorhabditis elegans; Mitochondrion; Biology; Respiratory chain; Oxidative phosphorylation; Organelle; Cell biology; Mitochondrial respiratory chain; Caenorhabditis; Function (biology); Model organism; Biochemistry; Genetics; Gene","score_opus":0.0142011026118819,"score_gpt":0.3295130131841793,"score_spread":0.3153119105722974,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W43799683","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42213595,0.0010207857,0.5764452,0.00008666684,0.00013681072,0.00007938783,0.000017663853,0.000003414779,0.00007410302],"genre_scores_gemma":[0.6330568,0.00010694134,0.36596766,0.00045149325,0.000095887925,0.0000073578635,0.00026522443,0.000015350113,0.000033261444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984168,0.0004887089,0.00036925983,0.00040693337,0.00008047595,0.00023785951],"domain_scores_gemma":[0.99913555,0.00018416446,0.00013797988,0.00041758872,0.000075879834,0.000048840535],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010095586,0.0001570155,0.0002887257,0.00014954885,0.000053021813,0.000010430133,0.00016927194,0.00026196177,0.000033400425],"category_scores_gemma":[0.0002741889,0.00013192573,0.00013137309,0.00033432498,0.0002087061,0.0000021809824,0.00011653185,0.00013262991,7.3279875e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040027753,0.000026137519,0.057604607,0.000003014292,0.00033728863,0.000002024974,0.00019360184,0.0005092908,0.9385896,0.0005336323,0.000029376928,0.0021314486],"study_design_scores_gemma":[0.00051294407,0.00016423619,0.218922,0.0000052991045,0.00044931276,0.000007716155,0.00018494745,0.0016177929,0.7718703,0.0037188863,0.0022907313,0.00025579915],"about_ca_topic_score_codex":0.00043714387,"about_ca_topic_score_gemma":0.0009990415,"teacher_disagreement_score":0.21092089,"about_ca_system_score_codex":0.000011239302,"about_ca_system_score_gemma":0.000031014475,"threshold_uncertainty_score":0.5379775},"labels":[],"label_agreement":null},{"id":"W4380152749","doi":"10.1007/978-1-0716-3271-0_1","title":"Lateral Filter Array Microfluidic Devices for Detecting Circulating Tumor Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Bio-sensing Technologies","field":"Engineering","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Circulating tumor cell; Microfluidics; Liquid biopsy; Isolation (microbiology); Biomarker; Biomedical engineering; Nanotechnology; Cancer; Materials science; Medicine; Biology; Bioinformatics; Internal medicine; Metastasis","score_opus":0.02864277683788048,"score_gpt":0.3298417491883341,"score_spread":0.3011989723504536,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380152749","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.280777,0.0017127725,0.71581423,0.000057170353,0.00051588664,0.00021673096,0.000012008688,0.0007716752,0.00012247686],"genre_scores_gemma":[0.17132609,0.00010308025,0.82820964,0.00016389707,0.00005149516,0.000047847105,0.00002202186,0.000057407076,0.00001850366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854743,0.00019479357,0.00034261646,0.00033358324,0.00003720439,0.0005443917],"domain_scores_gemma":[0.99936014,0.00027086062,0.000046216093,0.00026914087,0.000024888863,0.000028769555],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095566636,0.00021321622,0.00031571378,0.00030579334,0.00006315661,0.000022473194,0.00023362374,0.00019915005,0.000007572782],"category_scores_gemma":[0.0002542328,0.00020244546,0.00010811485,0.00044901227,0.00007721722,0.000023615596,0.000083689185,0.00022645564,0.000015266321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000042265565,0.0000032914625,0.00040342947,0.00007469996,0.000023115937,0.00002972862,0.000068008536,0.00011796604,0.9848692,0.00007734855,0.00023490652,0.014094112],"study_design_scores_gemma":[0.00019985018,0.00004395197,0.00010176822,0.000038462847,0.000010977126,0.000022738328,0.00009393807,0.0039537637,0.98568296,0.002741494,0.006865123,0.000244962],"about_ca_topic_score_codex":0.000012827695,"about_ca_topic_score_gemma":0.000003294426,"teacher_disagreement_score":0.112395406,"about_ca_system_score_codex":0.000045191548,"about_ca_system_score_gemma":0.000010580557,"threshold_uncertainty_score":0.82554865},"labels":[],"label_agreement":null},{"id":"W4382047042","doi":"10.1007/978-1-0716-3338-0_1","title":"Bacterial Binding, Phagocytosis, and Killing Capacity: Measurements Using Colony Forming Units","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Phagocytosis; Opsonin; Colony-forming unit; Bacterial colony; Microbiology; Bacteria; Immunofluorescence; Biology; Phagocyte; Chemistry; Immunology; Antibody; Genetics","score_opus":0.10611573929605823,"score_gpt":0.38248104058017834,"score_spread":0.2763653012841201,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047042","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.91644657,0.0006485625,0.081535086,0.000050623294,0.00093873846,0.00021546829,0.000006320418,0.000062880354,0.00009572602],"genre_scores_gemma":[0.7387445,0.00040026775,0.25938645,0.00026458132,0.00009290289,0.000105625004,0.0005180315,0.0000927439,0.00039489896],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967513,0.002061452,0.0003782559,0.00031498342,0.000025907917,0.00046811686],"domain_scores_gemma":[0.99934864,0.00024479412,0.00013263866,0.00018985936,0.00006632389,0.00001772784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024607682,0.00018208715,0.00034052055,0.00047633075,0.00017147181,0.000015048491,0.0001440924,0.00040119374,0.000048840986],"category_scores_gemma":[0.00059260445,0.00017855813,0.000044859473,0.00056142727,0.0001668051,0.00006877358,0.00014804135,0.0002470391,0.000037201364],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010225309,0.000010318329,0.001870931,0.000014319601,0.00008591288,0.000006372253,0.0003050103,0.000011869817,0.9861647,0.0003297602,0.000011424506,0.011087131],"study_design_scores_gemma":[0.001016226,0.00010318162,0.00041950133,0.000045150613,0.00003321623,0.000047801324,0.0001641042,0.00015463636,0.99025023,0.0004547633,0.007115604,0.00019559862],"about_ca_topic_score_codex":0.0001053725,"about_ca_topic_score_gemma":0.000009650004,"teacher_disagreement_score":0.17785136,"about_ca_system_score_codex":0.00006751119,"about_ca_system_score_gemma":0.000062199964,"threshold_uncertainty_score":0.7281389},"labels":[],"label_agreement":null},{"id":"W4382047063","doi":"10.1007/978-1-0716-3338-0_3","title":"Quantifying Phagocytosis by Immunofluorescence and Microscopy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Metropolitan University","funders":"","keywords":"Phagocytosis; Phagosome; Cell biology; Innate immune system; Macrophage; Opsonin; Biology; Immune system; Receptor; Microbiology; Chemistry; Immunology; Biochemistry; In vitro","score_opus":0.036466510872057156,"score_gpt":0.40911082669480453,"score_spread":0.3726443158227474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047063","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.77377564,0.034928493,0.18902543,0.00047985945,0.00103092,0.00034315517,0.000032035266,0.00017763668,0.00020680463],"genre_scores_gemma":[0.79835236,0.0031800678,0.19630432,0.00054738286,0.000018913524,0.0001459512,0.00055685913,0.000072117815,0.000822041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99747443,0.0011945673,0.00036810586,0.0004599465,0.000018787425,0.0004841895],"domain_scores_gemma":[0.99928904,0.00026332078,0.00009881381,0.00030310507,0.00002783384,0.000017884891],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012244205,0.00020127754,0.00037970385,0.0002598463,0.00012117525,0.000015971094,0.00022584508,0.00036070496,0.00006434487],"category_scores_gemma":[0.00025410112,0.00018917971,0.000072038565,0.00047990802,0.00030047566,0.000050370396,0.00020155926,0.00027223368,0.00009124395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036429574,0.00002687051,0.005567519,0.000011563799,0.0000495747,0.0000030226022,0.000112829206,0.0000018043947,0.95385456,0.00091765577,0.00044451008,0.03897366],"study_design_scores_gemma":[0.0007662309,0.00009735639,0.004804158,0.00002427187,0.000014915142,0.000021587444,0.00007093462,0.00006363244,0.9730409,0.0008489423,0.020041713,0.00020538985],"about_ca_topic_score_codex":0.00011760554,"about_ca_topic_score_gemma":0.0000033064834,"teacher_disagreement_score":0.03876827,"about_ca_system_score_codex":0.00003263066,"about_ca_system_score_gemma":0.000022665394,"threshold_uncertainty_score":0.7714525},"labels":[],"label_agreement":null},{"id":"W4382047071","doi":"10.1007/978-1-0716-3338-0_5","title":"Analysis of Efferocytic Receptor Dynamics and Synapse Formation in a Frustrated Efferocytosis Model","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"Canadian Institutes of Health Research","keywords":"Efferocytosis; Synapse; Receptor; Immunological synapse; Cell biology; Biology; Neuroscience; Immunology; T cell; T-cell receptor; Biochemistry","score_opus":0.021891747980448076,"score_gpt":0.35331659977281066,"score_spread":0.3314248517923626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047071","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.720837,0.0005577326,0.27825028,0.000054776312,0.000051120605,0.0001644185,0.00002537927,0.000024710136,0.000034582277],"genre_scores_gemma":[0.9772788,0.00022399907,0.021628177,0.00003192083,0.0000012532773,0.000049064573,0.0007338575,0.000011375849,0.000041503572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99751675,0.0013257008,0.0005419775,0.00029940598,0.000021331263,0.00029481942],"domain_scores_gemma":[0.9992237,0.0003157065,0.00015603306,0.00025062577,0.00004061314,0.000013333086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011263356,0.00015919081,0.0006106694,0.0013144974,0.000031450785,0.0000047034205,0.00014524936,0.00041548823,0.000021830638],"category_scores_gemma":[0.00030028386,0.00015019432,0.00010710026,0.0017688094,0.00014233314,0.000053342203,0.00010546846,0.00020198796,0.0000068474355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000096750955,0.000038645354,0.0061255177,0.00002677507,0.00028137863,0.0000015095935,0.00021655549,0.0050163562,0.9759458,0.002117903,0.000003816989,0.01012901],"study_design_scores_gemma":[0.0010779012,0.00013044689,0.017254474,0.000028664826,0.00021353488,0.0000045003344,0.00012049041,0.3503533,0.62924623,0.0013872345,0.000009514188,0.00017372934],"about_ca_topic_score_codex":0.000096571675,"about_ca_topic_score_gemma":0.00009042957,"teacher_disagreement_score":0.34669957,"about_ca_system_score_codex":0.000101773156,"about_ca_system_score_gemma":0.000020625748,"threshold_uncertainty_score":0.6124746},"labels":[],"label_agreement":null},{"id":"W4382047081","doi":"10.1007/978-1-0716-3338-0_9","title":"Quantitative Immunofluorescence to Study Phagosome Maturation and Resolution","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Metropolitan University","funders":"","keywords":"Phagosome; Phagocytosis; LAMP1; Cell biology; Immunofluorescence; Immunoelectron microscopy; Biology; Endosome; Chemistry; Antibody; Immunology; Intracellular","score_opus":0.02942575830669524,"score_gpt":0.39441020560969436,"score_spread":0.3649844473029991,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047081","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5234824,0.0004415562,0.47557604,0.000087711654,0.000092787435,0.0002655837,0.0000033571268,0.00001414167,0.000036436093],"genre_scores_gemma":[0.68840164,0.00016656828,0.31025597,0.0001611165,0.000035672358,0.000106900756,0.00077731203,0.000024153216,0.000070703034],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840516,0.0006417597,0.00022909512,0.00043604354,0.00005893786,0.00022900995],"domain_scores_gemma":[0.99959445,0.000028936951,0.000041879346,0.00024292755,0.0000445363,0.000047243986],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010643612,0.00013231534,0.00016118473,0.00017496363,0.000055206092,0.000011554455,0.00011813272,0.00014522471,0.0000057225952],"category_scores_gemma":[0.0002132135,0.00013166739,0.000039208946,0.00037663383,0.00005950843,0.00000300938,0.00009266576,0.000095979005,0.000009246751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020739147,0.000041592917,0.004488535,0.000005214838,0.000027004475,0.000014613912,0.00030247754,0.00007136244,0.98991406,0.0006913648,0.0000049182163,0.0042314893],"study_design_scores_gemma":[0.0013009777,0.0026209326,0.09301073,0.000018218561,0.000039075407,0.000013725293,0.0009469961,0.0015035725,0.8928832,0.0031234396,0.0040539373,0.0004851811],"about_ca_topic_score_codex":0.000043163574,"about_ca_topic_score_gemma":0.000039750903,"teacher_disagreement_score":0.1653201,"about_ca_system_score_codex":0.000010976637,"about_ca_system_score_gemma":0.000017015092,"threshold_uncertainty_score":0.536924},"labels":[],"label_agreement":null},{"id":"W4382047123","doi":"10.1007/978-1-0716-3338-0_12","title":"Multiplexed Phagosomal Assays for the Detection and Quantification of Bidirectional Exchange Between the Phagolysosomal Lumen and Extracellular Space","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Phagolysosome; Phagosome; Cell biology; Macrophage; Phagocytosis; Immune system; Extracellular; Organelle; Biology; Chemistry; Immunology; Biochemistry; In vitro","score_opus":0.0538437744031381,"score_gpt":0.4051816909613374,"score_spread":0.3513379165581993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047123","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4396519,0.0065140785,0.55216175,0.0008280446,0.00012651956,0.00065172825,0.000015958627,0.00002948798,0.000020519134],"genre_scores_gemma":[0.95294195,0.0005006851,0.045974698,0.000069995585,0.00012125762,0.00022303463,0.000032754124,0.000020105632,0.000115506],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988078,0.0005243042,0.00020178755,0.00023654924,0.0000672943,0.00016225556],"domain_scores_gemma":[0.99856144,0.0010659313,0.00009186585,0.00020328964,0.000043763674,0.00003368334],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015324714,0.00010333275,0.00021051674,0.000116964504,0.000099865196,0.0000064190585,0.00006734753,0.00012749525,0.000008796791],"category_scores_gemma":[0.0003596688,0.00006520438,0.00006430969,0.0002604668,0.00021931794,0.00001689767,0.000031929856,0.00011824877,7.5816047e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000112702415,0.000020971589,0.005637444,0.000034697725,0.000102145874,0.0000023051123,0.00014573862,0.000005108292,0.8935713,0.00062045146,0.000004261904,0.09974285],"study_design_scores_gemma":[0.0013113278,0.00025763904,0.11241107,0.000013424093,0.00015210954,0.000015590862,0.00014922662,0.0062355786,0.87257725,0.0039535635,0.002835479,0.00008776226],"about_ca_topic_score_codex":0.000039179406,"about_ca_topic_score_gemma":0.000005616381,"teacher_disagreement_score":0.51329005,"about_ca_system_score_codex":0.00001260237,"about_ca_system_score_gemma":0.000019546347,"threshold_uncertainty_score":0.26589575},"labels":[],"label_agreement":null},{"id":"W4382047181","doi":"10.1007/978-1-0716-3338-0_15","title":"Microscopy-Based Tracking and Quantification Methods to Study Phagosome Resolution","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"","keywords":"Phagosome; Vesicle; Phagocytosis; Resolution (logic); Microscopy; Materials science; Chemistry; Cell biology; Nanotechnology; Membrane; Biology; Pathology; Computer science; Medicine; Artificial intelligence; Biochemistry","score_opus":0.04782714069732392,"score_gpt":0.43854025509235783,"score_spread":0.3907131143950339,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382047181","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41147456,0.00035959625,0.58752996,0.00011438099,0.00013160903,0.00034120417,0.000004432922,0.000024314153,0.000019970112],"genre_scores_gemma":[0.29431418,0.00003917042,0.70442784,0.00022014252,0.000039230395,0.0001070048,0.00078626524,0.000031502204,0.000034640594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969266,0.0016356796,0.0003584736,0.0006828877,0.00006611624,0.00033025755],"domain_scores_gemma":[0.99930406,0.00006624927,0.000071881805,0.00042035457,0.000058373567,0.00007906864],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031390784,0.0001909827,0.00024943158,0.0002949119,0.00008058396,0.0000202511,0.00017349653,0.00024392839,0.000007856313],"category_scores_gemma":[0.00032437715,0.00019939827,0.000073863695,0.00054213166,0.00007571573,0.0000029166044,0.00007374125,0.00013285705,0.0000058770906],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097171105,0.000079237136,0.009108341,0.00001222187,0.00002425251,0.0000097261445,0.00014739699,0.0002733381,0.9667117,0.00013322722,0.00000347727,0.023399927],"study_design_scores_gemma":[0.00070049363,0.00048062849,0.016628934,0.0000087242615,0.000027649148,0.0000036689084,0.00015609252,0.001338938,0.97387826,0.0006103027,0.0059187124,0.0002476156],"about_ca_topic_score_codex":0.000038143895,"about_ca_topic_score_gemma":0.00003364706,"teacher_disagreement_score":0.11716037,"about_ca_system_score_codex":0.000016502241,"about_ca_system_score_gemma":0.00003354063,"threshold_uncertainty_score":0.8131226},"labels":[],"label_agreement":null},{"id":"W4382120028","doi":"10.1007/978-1-0716-3338-0_4","title":"Methods for Quantitative Efferocytosis Assays","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Robarts Clinical Trials; Western University","funders":"Canadian Institutes of Health Research","keywords":"Efferocytosis; Cell biology; Phagocytosis; Apoptosis; Cell; Biology; Chemistry; Macrophage; In vitro; Biochemistry","score_opus":0.06326627100144591,"score_gpt":0.4804815965303313,"score_spread":0.4172153255288854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120028","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015177319,0.0041463454,0.97809476,0.00036585738,0.0010584295,0.00055031123,0.000021472044,0.00013567277,0.0004498252],"genre_scores_gemma":[0.010055875,0.00010983416,0.9883566,0.00022044698,0.00001369907,0.00040896537,0.00033545776,0.0000388427,0.00046029617],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99369997,0.00470058,0.00048389207,0.0005218035,0.000016143793,0.00057763315],"domain_scores_gemma":[0.9967263,0.0026447966,0.0001479169,0.00037918592,0.00008229674,0.00001955249],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0045233523,0.00023585733,0.0005857577,0.00046466547,0.00012192685,0.00000997148,0.0003086372,0.00050886185,0.000072200186],"category_scores_gemma":[0.0020847106,0.00021274193,0.00022830968,0.00066171004,0.0002160126,0.000041509127,0.0001600312,0.0002525475,0.000111088855],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010136602,0.00003412393,0.00028278842,0.000016293858,0.0001300776,0.0000010901061,0.00014333238,0.000028282338,0.8412166,0.028241906,0.00019042686,0.12961367],"study_design_scores_gemma":[0.001264787,0.00037488216,0.0017645297,0.000017122687,0.000042151194,0.000008724628,0.00011060936,0.0007398163,0.91650605,0.03684995,0.042070363,0.00025102467],"about_ca_topic_score_codex":0.00003289303,"about_ca_topic_score_gemma":0.0000032464914,"teacher_disagreement_score":0.12936264,"about_ca_system_score_codex":0.000056536337,"about_ca_system_score_gemma":0.000040083836,"threshold_uncertainty_score":0.8675364},"labels":[],"label_agreement":null},{"id":"W4382120097","doi":"10.1007/978-1-0716-3338-0_6","title":"Super-Resolution Spinning-Disk Confocal Microscopy Using Optical Photon Reassignment (SoRa) to Visualize the Actin Cytoskeleton in Macrophages","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Confocal; Cell biology; Actin; Confocal microscopy; Cytoskeleton; Podosome; Two-photon excitation microscopy; Actin cytoskeleton; Extracellular; Microscope; Super-resolution microscopy; Microscopy; Biophysics; Phagocytosis; Materials science; Chemistry; Biology; Cell; Optics; Scanning confocal electron microscopy; Physics; Biochemistry","score_opus":0.027540284018026544,"score_gpt":0.4629363657045769,"score_spread":0.43539608168655036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120097","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40965262,0.00028548227,0.58906883,0.00027454167,0.00013317387,0.000492115,0.00001036995,0.00003960107,0.000043234453],"genre_scores_gemma":[0.11737878,0.00017303962,0.8811624,0.00081792544,0.00006822825,0.00018829196,0.00008543571,0.000067227425,0.000058664904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965121,0.0012091149,0.00051536,0.00084517204,0.00012509727,0.0007931305],"domain_scores_gemma":[0.9990061,0.00010980103,0.00009767244,0.00063033093,0.000055257984,0.00010087476],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017552839,0.00033756392,0.0003896019,0.00026742578,0.00009531867,0.000029726163,0.00050220254,0.0004674173,0.000010987722],"category_scores_gemma":[0.0008606106,0.00029443903,0.00011589727,0.0007134536,0.0003604296,0.0000058371743,0.00055766857,0.00037142975,0.0000092558075],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001846447,0.00005530541,0.0015005029,0.000013501399,0.000016411961,0.00004078364,0.000083070394,0.00047866857,0.99312824,0.00035572692,0.00009243284,0.004050693],"study_design_scores_gemma":[0.00042850146,0.00042822128,0.0006870533,0.000050250077,0.000010713402,0.00002182718,0.00014468719,0.0011364609,0.9912862,0.00074973475,0.004731289,0.000325035],"about_ca_topic_score_codex":0.00016429962,"about_ca_topic_score_gemma":0.00003619831,"teacher_disagreement_score":0.29227385,"about_ca_system_score_codex":0.00015501535,"about_ca_system_score_gemma":0.000095318326,"threshold_uncertainty_score":0.99995077},"labels":[],"label_agreement":null},{"id":"W4382120160","doi":"10.1007/978-1-0716-3338-0_7","title":"Filamentous Bacteria as Targets to Study Phagocytosis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; The Scarborough Hospital; Hospital for Sick Children","funders":"","keywords":"Phagosome; Phagocytosis; Bacteria; Microbiology; Biology; Particle (ecology); Cell biology; Chemistry; Ecology","score_opus":0.02239171516543382,"score_gpt":0.3775961761909702,"score_spread":0.3552044610255364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120160","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6514605,0.00016244569,0.34729287,0.00009195062,0.00025638336,0.00041897563,0.000008404139,0.00003238666,0.00027604672],"genre_scores_gemma":[0.80003536,0.00009444425,0.19603519,0.00085240684,0.00012383584,0.00026780996,0.001969899,0.00006525861,0.0005557757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977776,0.0007207877,0.00032665057,0.00065158104,0.00008674633,0.0004366592],"domain_scores_gemma":[0.99928546,0.000024284805,0.00005076955,0.00048476626,0.000042390777,0.00011232743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011295184,0.00022192334,0.00027816,0.0002219203,0.000053357784,0.000014893245,0.0002897002,0.00022804156,0.00012596285],"category_scores_gemma":[0.00020054007,0.00022420105,0.000114301605,0.0004727519,0.00004389263,0.0000018044682,0.00017295442,0.0001185032,0.00008774251],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010474859,0.00011980268,0.0063478504,0.000005227564,0.00006317387,0.00007987601,0.0002241149,0.000042945205,0.98555917,0.0000824763,0.00003052786,0.0073400824],"study_design_scores_gemma":[0.0008453141,0.0011603321,0.01182144,0.000005021742,0.000025529414,0.000009577306,0.00023062414,0.000035249028,0.94705117,0.0008338891,0.037646104,0.00033577],"about_ca_topic_score_codex":0.00006270665,"about_ca_topic_score_gemma":0.00004209702,"teacher_disagreement_score":0.15125766,"about_ca_system_score_codex":0.00001796856,"about_ca_system_score_gemma":0.000035226258,"threshold_uncertainty_score":0.91426533},"labels":[],"label_agreement":null},{"id":"W4382120163","doi":"10.1007/978-1-0716-3338-0_24","title":"Using Ion Substitution and Fluid Indicators to Monitor Macropinosome Dynamics in Live Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"","keywords":"Pinocytosis; Endocytosis; Endocytic cycle; Extracellular; Vacuole; Cell biology; Chemistry; Intracellular; Biophysics; Biology; Cell; Biochemistry; Cytoplasm","score_opus":0.019326856678332074,"score_gpt":0.34767514604510263,"score_spread":0.3283482893667706,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120163","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6008815,0.00026018452,0.3984134,0.000031912514,0.00019192856,0.00017562642,0.0000095295945,0.000009964695,0.000025960515],"genre_scores_gemma":[0.8127633,0.00040268953,0.1854932,0.0001340645,0.00007499143,0.000033660675,0.001035352,0.000031397307,0.000031341468],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984886,0.0003853143,0.00027526816,0.0004686969,0.000056938818,0.0003252022],"domain_scores_gemma":[0.9996092,0.000020048325,0.000049466886,0.00022314649,0.000021237569,0.000076936325],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00062915805,0.00016636032,0.00021148717,0.00044003106,0.00003802903,0.0000098645905,0.00012887364,0.00034411575,0.000004886598],"category_scores_gemma":[0.00007284519,0.00017923603,0.00005464962,0.0005538773,0.00009853748,0.0000029399296,0.000101502505,0.00013464609,0.0000057639395],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048861606,0.000019184035,0.020497564,0.000016681026,0.00001076745,0.000031799416,0.00006984482,0.00051121815,0.9753818,0.0005714157,8.644867e-7,0.0028400298],"study_design_scores_gemma":[0.000462296,0.00017508738,0.0072782002,0.000025752934,0.000011212642,0.000008851629,0.00013532196,0.0050163884,0.9847327,0.00064498256,0.0012234616,0.00028576795],"about_ca_topic_score_codex":0.00012580231,"about_ca_topic_score_gemma":0.00013354169,"teacher_disagreement_score":0.21292019,"about_ca_system_score_codex":0.00007025947,"about_ca_system_score_gemma":0.0000304146,"threshold_uncertainty_score":0.73090327},"labels":[],"label_agreement":null},{"id":"W4382120237","doi":"10.1007/978-1-0716-3338-0_2","title":"Analysis of Human and Mouse Neutrophil Phagocytosis by Flow Cytometry","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neutrophil, Myeloperoxidase and Oxidative Mechanisms","field":"Immunology and Microbiology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Antibody opsonization; Phagocytosis; Flow cytometry; Opsonin; Antibody; Immunology; Biology; Platelet; Complement receptor; Phagocyte; Complement system; Microbiology; Chemistry","score_opus":0.0228466467459426,"score_gpt":0.3680278304707212,"score_spread":0.3451811837247786,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120237","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8664058,0.0017623026,0.13111494,0.00009694952,0.0001331604,0.00016831812,0.00015206209,0.000068977315,0.00009751519],"genre_scores_gemma":[0.921007,0.0006996685,0.07579942,0.0005345144,0.000014247248,0.000091044174,0.0011634849,0.000056463716,0.00063418085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966281,0.0018478489,0.0004718251,0.0005734191,0.000029831495,0.0004489748],"domain_scores_gemma":[0.9990367,0.00030528614,0.0001487085,0.00042418047,0.000052916774,0.00003215485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011209027,0.0002467209,0.0008411759,0.0014519045,0.00008715584,0.0000064421533,0.0002875268,0.00039855725,0.00019045225],"category_scores_gemma":[0.00015411343,0.00022543354,0.00019070173,0.0022181147,0.00035575466,0.000028029892,0.00025573774,0.0002977476,0.000025634261],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036618298,0.000065884335,0.0034330736,0.0000121437315,0.0009944252,0.000014140862,0.00008917976,0.000022230515,0.9832263,0.0021758887,0.00006157911,0.0098685175],"study_design_scores_gemma":[0.00078402366,0.00028816183,0.0016352101,0.000007696933,0.00032781594,0.0000040633595,0.000081446335,0.00007342882,0.99414283,0.0017366526,0.00070211856,0.0002165351],"about_ca_topic_score_codex":0.00010480667,"about_ca_topic_score_gemma":0.000012005755,"teacher_disagreement_score":0.05531552,"about_ca_system_score_codex":0.000025438216,"about_ca_system_score_gemma":0.000014629578,"threshold_uncertainty_score":0.9192913},"labels":[],"label_agreement":null},{"id":"W4382120238","doi":"10.1007/978-1-0716-3338-0_11","title":"Measuring Phagosomal pH by Fluorescence Microscopy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Fluorophore; Photobleaching; Microscopy; Fluorescence; Fluorescence microscope; Instrumentation (computer programming); Population; Fluorescence-lifetime imaging microscopy; Confocal microscopy; Calibration; Nanotechnology; Materials science; Optics; Biophysics; Chemistry; Computer science; Physics; Biology; Medicine","score_opus":0.023326872368878954,"score_gpt":0.3991286750509496,"score_spread":0.37580180268207064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120238","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0718163,0.001621857,0.9253085,0.00013623922,0.00025971275,0.00034712857,0.00003500566,0.00016230138,0.00031291888],"genre_scores_gemma":[0.012707655,0.0007936297,0.9853959,0.0003527909,0.00006788125,0.00014994528,0.00024178543,0.000077187986,0.00021322208],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99713427,0.0007204759,0.00040233633,0.0008851246,0.00010004723,0.000757771],"domain_scores_gemma":[0.9990106,0.000051302843,0.00010648241,0.0006664405,0.00006618686,0.00009897597],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010689517,0.00032338302,0.00033583253,0.00020550443,0.000079117126,0.000020091853,0.0006166252,0.00043215568,0.000013711925],"category_scores_gemma":[0.0005914307,0.00034014316,0.00012411817,0.0005645686,0.00032590097,0.000005680362,0.00042723233,0.0002904213,0.000027613229],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004781337,0.00003659807,0.002688802,0.000014213594,0.000019413097,0.00002014187,0.00002212153,0.00001511792,0.9857461,0.00023756483,0.0010515584,0.010100543],"study_design_scores_gemma":[0.00036497976,0.00018924172,0.00014598864,0.000023284038,0.0000063548596,0.000014725297,0.000023832275,0.00008083624,0.98220366,0.0022353898,0.01435591,0.00035576904],"about_ca_topic_score_codex":0.000025012689,"about_ca_topic_score_gemma":0.000004483775,"teacher_disagreement_score":0.06008737,"about_ca_system_score_codex":0.000043861655,"about_ca_system_score_gemma":0.000061886545,"threshold_uncertainty_score":0.99990505},"labels":[],"label_agreement":null},{"id":"W4382120239","doi":"10.1007/978-1-0716-3338-0_10","title":"Approaches to Measuring Reductive and Oxidative Events in Phagosomes","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Redox biology and oxidative stress","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Phagosome; Redox; Cell biology; Oxidative phosphorylation; Reactive oxygen species; Organelle; Chemistry; Function (biology); Biology; Biochemistry; Phagocytosis","score_opus":0.10765301713866511,"score_gpt":0.39386485947324335,"score_spread":0.28621184233457825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90716535,0.0007909196,0.09069623,0.0003456904,0.00014574229,0.00036433636,0.000010896608,0.000016238651,0.0004645777],"genre_scores_gemma":[0.815464,0.00025798441,0.18339384,0.00023534246,0.000065848646,0.00022984919,0.000116420684,0.000030038433,0.0002066321],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99703777,0.0015263616,0.00026070364,0.00070844736,0.00004817663,0.00041856483],"domain_scores_gemma":[0.9994815,0.00008543088,0.000058759677,0.00027604363,0.000024534653,0.00007376158],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013096068,0.00021181242,0.0003016132,0.00032476272,0.000040166782,0.00000413914,0.00022679532,0.00029929355,0.0000037448388],"category_scores_gemma":[0.00072604633,0.00019923401,0.00005343669,0.0005025224,0.00017903418,0.000003932127,0.0003590711,0.00018682402,0.0000067474093],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000104875224,0.000034023902,0.041179735,0.000011226305,0.000047761663,0.00001099314,0.00023347221,0.00012024058,0.9419614,0.0010618254,0.000010878395,0.01522359],"study_design_scores_gemma":[0.0006014146,0.00027388547,0.053469826,0.000022147156,0.000006387287,0.000010243964,0.00047609644,0.0000531359,0.9354762,0.008241075,0.0010887476,0.00028086556],"about_ca_topic_score_codex":0.000026328922,"about_ca_topic_score_gemma":0.000059702874,"teacher_disagreement_score":0.092697605,"about_ca_system_score_codex":0.000021267788,"about_ca_system_score_gemma":0.00003384114,"threshold_uncertainty_score":0.81245273},"labels":[],"label_agreement":null},{"id":"W4382120241","doi":"10.1007/978-1-0716-3338-0","title":"Phagocytosis and Phagosomes","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Phagocytosis and Immune Regulation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Metropolitan University","funders":"Cumming School of Medicine, University of Calgary; Faculty of Veterinary Medicine, University of Calgary; Faculty of Dentistry, University of Toronto; University of Toronto; Dalhousie University; Newcastle University; Hospital for Sick Children; Francis Crick Institute; McMaster University","keywords":"Phagosome; Phagocytosis; Cell biology; Biology","score_opus":0.028835303735651983,"score_gpt":0.3734924043514259,"score_spread":0.3446571006157739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120241","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0036879322,0.3160719,0.39869508,0.0012992407,0.01117346,0.0033153202,0.00045266436,0.0011141737,0.26419026],"genre_scores_gemma":[0.0004437013,0.0036149975,0.070916094,0.00049992296,0.00010455147,0.00018957771,0.0015838877,0.0002234938,0.9224238],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965488,0.0014680881,0.00062248745,0.00079207757,0.000029249662,0.00053932244],"domain_scores_gemma":[0.99851936,0.0006195668,0.00026545723,0.00052065187,0.000048610047,0.000026354795],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012098234,0.00046932636,0.0010232255,0.00061681663,0.00008329051,0.0000149737,0.0003313839,0.0016258662,0.00021568756],"category_scores_gemma":[0.00030362798,0.00044418647,0.00020446593,0.00018357148,0.0004961092,0.000033610213,0.00037213994,0.00076163985,0.00025852173],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042735057,0.000033478147,0.00012566666,0.00006287407,0.00036614508,0.000021055272,0.0000950791,0.0000019260383,0.870463,0.016515454,0.0030223508,0.10925024],"study_design_scores_gemma":[0.0022431004,0.00038789786,0.0007002391,0.0002436484,0.0002482615,0.00012415247,0.00003386348,0.000018358078,0.32397643,0.121548526,0.54938567,0.0010898454],"about_ca_topic_score_codex":0.000025604115,"about_ca_topic_score_gemma":0.000008768012,"teacher_disagreement_score":0.6582335,"about_ca_system_score_codex":0.00012988638,"about_ca_system_score_gemma":0.00015384867,"threshold_uncertainty_score":0.999801},"labels":[],"label_agreement":null},{"id":"W4382120379","doi":"10.1007/978-1-0716-3338-0_8","title":"The Derivation and Use of HoxB8-Driven Conditionally Immortalized Macrophages","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immortalised cell line; Cell biology; Progenitor cell; Myeloid; Myeloid cells; Biology; Progenitor; Immune system; Immunology; Cell culture; Stem cell; Genetics","score_opus":0.02851321480533903,"score_gpt":0.37960764175049183,"score_spread":0.3510944269451528,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4382120379","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85798234,0.0060321153,0.13350417,0.00055313087,0.0012325775,0.00040873874,0.00004700232,0.00006525616,0.0001746925],"genre_scores_gemma":[0.62796295,0.004457346,0.36244303,0.0009784298,0.000035571244,0.00032781117,0.0007573228,0.000083367326,0.0029541997],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977239,0.0014570015,0.00031839198,0.00022861472,0.000018382447,0.00025372786],"domain_scores_gemma":[0.9983324,0.0012097514,0.0001293206,0.00026242374,0.000058953694,0.0000071655627],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00082360866,0.00011478428,0.0002384619,0.00013291111,0.00009241038,0.000007915536,0.00017224331,0.00022890091,0.00006610074],"category_scores_gemma":[0.00062441407,0.00008791505,0.000054729946,0.00025838224,0.00066481566,0.000025648991,0.00016135715,0.00018401434,0.000019379055],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005482325,0.000010300383,0.0031269994,0.000008395154,0.00009562405,0.00000524566,0.00008881801,0.000035140343,0.97877914,0.008235316,0.00019152352,0.009368654],"study_design_scores_gemma":[0.00090846885,0.00009239421,0.021854138,0.000015481955,0.000022306009,0.000021747639,0.00007398722,0.000050765866,0.93949616,0.008265203,0.029068006,0.00013132402],"about_ca_topic_score_codex":0.000056555447,"about_ca_topic_score_gemma":0.000012322008,"teacher_disagreement_score":0.23001939,"about_ca_system_score_codex":0.00001720949,"about_ca_system_score_gemma":0.000033373235,"threshold_uncertainty_score":0.35850716},"labels":[],"label_agreement":null},{"id":"W43831812","doi":"10.1007/978-1-60327-365-7_2","title":"Clostridium difficile and the Disease It Causes","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Clostridium difficile; Metronidazole; Medicine; Pseudomembranous colitis; Antimicrobial; Clostridium difficile toxin A; Microbiology; Diarrhea; Antitoxin; Immunology; Clindamycin; Clostridium difficile toxin B; Vancomycin; Intensive care medicine; Antibiotics; Internal medicine; Biology; Toxin; Bacteria","score_opus":0.0270958747886915,"score_gpt":0.41260902576086966,"score_spread":0.38551315097217814,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W43831812","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9676968,0.0015720773,0.0125081735,0.015365002,0.00033506413,0.00073380786,0.000017669261,0.000040801595,0.001730602],"genre_scores_gemma":[0.89166534,0.000693071,0.10385574,0.0025708913,0.00030889033,0.00020602912,0.000042870022,0.000057127603,0.00060004473],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979963,0.00055652886,0.0003465406,0.00046813217,0.00016164499,0.0004708803],"domain_scores_gemma":[0.9981504,0.0007963705,0.000057270332,0.0006602458,0.000084122126,0.00025160826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016069819,0.00021516572,0.00044817233,0.00018375007,0.00009009532,0.000026221778,0.0002087339,0.00020597715,0.00022342477],"category_scores_gemma":[0.0031499192,0.00013807212,0.00014282022,0.00034220747,0.00094157417,0.000015701633,0.00024302343,0.0009162267,0.000015855972],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00073276565,0.00012689609,0.0034606946,0.000037302158,0.00004496544,0.00017440898,0.00007465555,0.000001385907,0.974544,0.011985349,0.00013842482,0.00867917],"study_design_scores_gemma":[0.006730547,0.00026017072,0.004239999,0.000042162435,0.00018506285,0.00018703361,0.00017256076,0.00081347144,0.9443341,0.006182568,0.036491588,0.0003607266],"about_ca_topic_score_codex":0.00016211192,"about_ca_topic_score_gemma":0.000065808985,"teacher_disagreement_score":0.09134756,"about_ca_system_score_codex":0.000028740178,"about_ca_system_score_gemma":0.00017624667,"threshold_uncertainty_score":0.56304175},"labels":[],"label_agreement":null},{"id":"W4383302884","doi":"10.1007/978-1-0716-3291-8_14","title":"Predictive Biomarkers of Response to Neoadjuvant Therapy in Muscle Invasive Bladder Cancer","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bladder and Urothelial Cancer Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Medicine; Bladder cancer; Chemotherapy; Oncology; Neoadjuvant therapy; Clinical trial; Internal medicine; Cisplatin; Cancer; Breast cancer","score_opus":0.04120421579983263,"score_gpt":0.43201583858881426,"score_spread":0.3908116227889816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383302884","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.974382,0.0012885386,0.020660944,0.0018679634,0.00026258806,0.0010141076,0.00006211782,0.00003925233,0.00042250103],"genre_scores_gemma":[0.8035875,0.0015828357,0.19014923,0.0031601412,0.00006161744,0.0010744497,0.00004197558,0.00008216866,0.0002600847],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99756587,0.0013001086,0.0003175275,0.00039141462,0.000096724034,0.00032837005],"domain_scores_gemma":[0.9990533,0.00043410808,0.000058872512,0.00030355656,0.000063633284,0.00008651537],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011363103,0.00016389614,0.000439136,0.0005958804,0.000013927592,0.0000022032175,0.00011655512,0.00016674754,0.00009282658],"category_scores_gemma":[0.0006377996,0.00013545461,0.00008864717,0.0011099982,0.000111373985,0.000014305148,0.00007025495,0.00014006573,0.000007976331],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0038677992,0.00010351384,0.030946242,0.000012981603,0.00019848188,0.0001631798,0.0011928556,0.00007878839,0.89409536,0.00002155242,0.000081137274,0.0692381],"study_design_scores_gemma":[0.004963804,0.0025017795,0.36443865,0.0001345518,0.0000403182,0.000006696651,0.00045211552,0.00010388329,0.6238025,0.0015136675,0.0018630414,0.00017903392],"about_ca_topic_score_codex":0.0009570454,"about_ca_topic_score_gemma":0.00012436612,"teacher_disagreement_score":0.3334924,"about_ca_system_score_codex":0.0001300952,"about_ca_system_score_gemma":0.000285343,"threshold_uncertainty_score":0.55236787},"labels":[],"label_agreement":null},{"id":"W4383482329","doi":"10.1007/7651_2023_494","title":"Manual Dissociation of Mammalian Preimplantation Embryos for Single-Cell Genomics","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Genomics; Embryo; Computational biology; Biology; Cell biology; Genetics; Genome; Gene","score_opus":0.031229637077175354,"score_gpt":0.3608840386390911,"score_spread":0.3296544015619157,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383482329","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49736962,0.00012036566,0.5016189,0.000039830404,0.00024230451,0.0002768662,0.0000612888,0.000013000882,0.00025779757],"genre_scores_gemma":[0.58051956,0.00009391806,0.41737786,0.00016006907,0.00011733305,0.00009466735,0.0012652018,0.000051629922,0.0003197495],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985517,0.00037246806,0.0003674286,0.0003588146,0.000051131658,0.00029843798],"domain_scores_gemma":[0.9994542,0.000084648054,0.00012810163,0.00022503914,0.00006949346,0.00003854458],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007844698,0.00015208665,0.00023703894,0.0001355071,0.00003636866,0.000008028018,0.00018723475,0.00031311,0.0000034152954],"category_scores_gemma":[0.00021225383,0.00016268044,0.00013365202,0.000184213,0.00006913741,0.000002467334,0.000054152493,0.000075218275,0.000002228018],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013440671,0.00007441156,0.002188717,0.000058883583,0.000025581116,0.000001950265,0.00010281372,0.00036134553,0.9900533,0.00034669004,0.00004065821,0.0066112312],"study_design_scores_gemma":[0.00083968,0.00045542835,0.0006673969,0.0000060075176,0.0000238543,0.0000037167515,0.000076919314,0.0006362109,0.993003,0.001803553,0.0023052017,0.00017904236],"about_ca_topic_score_codex":0.000026209884,"about_ca_topic_score_gemma":0.000029738125,"teacher_disagreement_score":0.084241055,"about_ca_system_score_codex":0.00002786904,"about_ca_system_score_gemma":0.000044727014,"threshold_uncertainty_score":0.6633916},"labels":[],"label_agreement":null},{"id":"W4383702734","doi":"10.1007/978-1-0716-3275-8_9","title":"An RNA/DNA-Based Flow Cytometry Approach for Isolating Slow-Cycling Stem Cells","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Planarian Biology and Electrostimulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"Flow cytometry; Cell sorting; Stem cell; Biology; Population; Cell biology; Context (archaeology); Molecular biology","score_opus":0.029646834107047333,"score_gpt":0.3774091842931501,"score_spread":0.3477623501861028,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383702734","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.116100885,0.00018196479,0.8827067,0.000115861796,0.00022836345,0.0004073447,0.000047226444,0.00006233558,0.00014930125],"genre_scores_gemma":[0.20075944,0.000015509822,0.79632443,0.0009392336,0.00015293476,0.00013761378,0.0015544774,0.000048174305,0.00006815444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9969883,0.0011191119,0.00040352647,0.00079527585,0.000057062774,0.00063669996],"domain_scores_gemma":[0.9990263,0.00020736066,0.00013400445,0.00047728728,0.000065496126,0.0000895245],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0022243941,0.00026789072,0.00034862375,0.00030965393,0.0001324812,0.000018695066,0.00034216334,0.000713733,0.0000036986219],"category_scores_gemma":[0.00024021331,0.0002693381,0.00015524316,0.0005032234,0.00010269767,0.0000049436007,0.00007275169,0.00021490133,0.0000040434893],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018852377,0.00005934894,0.0019302135,0.0000284621,0.00004386872,0.0000045058187,0.000018509856,0.025302384,0.96035326,0.000115814706,0.00008772502,0.011867392],"study_design_scores_gemma":[0.0007936241,0.0005033236,0.00018265561,0.0000058918267,0.000018110937,0.000003930369,0.00003045546,0.21442308,0.78247654,0.00046378112,0.00082199334,0.00027660595],"about_ca_topic_score_codex":0.000005812394,"about_ca_topic_score_gemma":0.000003559122,"teacher_disagreement_score":0.1891207,"about_ca_system_score_codex":0.000027096283,"about_ca_system_score_gemma":0.00007792108,"threshold_uncertainty_score":0.99997586},"labels":[],"label_agreement":null},{"id":"W4383704329","doi":"10.1007/978-1-0716-3323-6","title":"Single-Cell Assays","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Single-cell and spatial transcriptomics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Computational biology; Genomics; Drug discovery; Transcriptome; Data science; Biology; Computer science; Bioinformatics; Genetics; Genome; Gene; Gene expression","score_opus":0.03582881964686031,"score_gpt":0.3389396765775269,"score_spread":0.3031108569306666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383704329","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000700672,0.004632835,0.7232474,0.00010269627,0.0023026452,0.0006273805,0.00012572556,0.00011066288,0.26814997],"genre_scores_gemma":[0.0001779296,0.0007113925,0.40625048,0.0010520827,0.00070611405,0.000098882665,0.0022021604,0.00040349536,0.5883975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961977,0.0009963112,0.00069638214,0.0012465185,0.00014411678,0.0007189849],"domain_scores_gemma":[0.9983863,0.00014846242,0.00025070697,0.0009788043,0.000100623176,0.00013508885],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012233951,0.00064994104,0.00079242856,0.0003397589,0.000056089957,0.000029857616,0.00074167334,0.0020887821,0.00004705006],"category_scores_gemma":[0.00034913849,0.00068574003,0.00044849838,0.00018783778,0.00029165283,0.0000016406811,0.00034731906,0.00072968693,0.00008150704],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057975783,0.00010857183,0.000107109,0.000087380795,0.00009482345,0.00007470063,0.000019784575,0.00003070692,0.98354876,0.0007972256,0.0043134536,0.01075951],"study_design_scores_gemma":[0.00088012835,0.00071577344,0.000010457568,0.00006918098,0.000076641016,0.000019530526,0.000008354659,0.000040698225,0.5120385,0.014930759,0.4702745,0.0009354177],"about_ca_topic_score_codex":0.0000214943,"about_ca_topic_score_gemma":0.000055890956,"teacher_disagreement_score":0.4715102,"about_ca_system_score_codex":0.00011236365,"about_ca_system_score_gemma":0.000344913,"threshold_uncertainty_score":0.9995594},"labels":[],"label_agreement":null},{"id":"W4383710335","doi":"10.1007/978-1-0716-3179-9_22","title":"Monitoring of Rho GTPase Activity in Podocytes","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal Diseases and Glomerulopathies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Canadian Institutes of Health Research","keywords":"RHOA; GTPase; Podocyte; RAC1; Cell biology; CDC42; Glomerular basement membrane; Glomerulus; Actin cytoskeleton; Cytoskeleton; Actin; Chemistry; Biology; Kidney; Proteinuria; Biochemistry; Signal transduction; Endocrinology; Cell","score_opus":0.04218252233155309,"score_gpt":0.4458091811967001,"score_spread":0.40362665886514704,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383710335","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98180467,0.0015265016,0.015901504,0.00019329076,0.00014474968,0.00013778711,0.0000044161006,0.000024980869,0.0002620955],"genre_scores_gemma":[0.82218903,0.0005095021,0.1771292,0.000043223867,0.00003356265,0.000030419988,0.0000053767185,0.000013299085,0.000046361296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987946,0.00052900554,0.0001975033,0.00020290256,0.00005862483,0.00021734329],"domain_scores_gemma":[0.99945796,0.00021750681,0.00004722153,0.00020428424,0.000024215795,0.00004879831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007397666,0.000091513175,0.00033236714,0.0003400989,0.000008723246,0.0000018528292,0.000061685445,0.00010572961,0.000010306365],"category_scores_gemma":[0.0008404414,0.00007895678,0.00008554351,0.0006228371,0.000076941404,0.000013728771,0.00007165987,0.0001520106,0.00000460344],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000094123905,0.000052412164,0.22949749,0.00008486684,0.000013151219,0.0001719701,0.000050678827,0.000021879257,0.7166858,0.0001586592,0.0000019624713,0.05316702],"study_design_scores_gemma":[0.0005192922,0.00014293022,0.40876186,0.000115542585,0.000013985517,0.0000050447916,0.00007937047,0.00020367716,0.5873531,0.00262466,0.00011093842,0.000069630114],"about_ca_topic_score_codex":0.00013967197,"about_ca_topic_score_gemma":0.0000027262488,"teacher_disagreement_score":0.17926437,"about_ca_system_score_codex":0.000027186656,"about_ca_system_score_gemma":0.000037176964,"threshold_uncertainty_score":0.3219764},"labels":[],"label_agreement":null},{"id":"W4383710592","doi":"10.1007/978-1-0716-3179-9_16","title":"Multiplex In Situ Hybridization in the Study of Acute Kidney Injury","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"In situ hybridization; Multiplex; Biology; Computational biology; Pathology; Molecular biology; Messenger RNA; Bioinformatics; Medicine; Gene; Genetics","score_opus":0.016377209322451697,"score_gpt":0.3890649231461921,"score_spread":0.37268771382374044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383710592","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9847274,0.00012419895,0.014014111,0.00019365954,0.00015284434,0.00044071896,0.0000117426425,0.0000068490926,0.00032847506],"genre_scores_gemma":[0.9893415,0.00034679638,0.009572607,0.0004233618,0.00002330978,0.00009849583,0.00014117919,0.000015341662,0.000037381553],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974519,0.001536389,0.00035562535,0.00034221652,0.00006874021,0.0002451526],"domain_scores_gemma":[0.9995126,0.00003689466,0.000081749786,0.0003155078,0.000025341677,0.00002791362],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012868654,0.0001302946,0.00022037177,0.00025068974,0.000016681464,0.0000041956614,0.00029626512,0.00021229169,0.0000024093642],"category_scores_gemma":[0.00028802687,0.00009611511,0.00005656339,0.0008255405,0.00007709316,0.0000018291694,0.00012438498,0.00020053843,0.000001910292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000098544784,0.00013162756,0.016034584,0.000008584565,0.00004972133,0.00004238978,0.00037820457,0.000382534,0.97827744,0.000054603788,0.000094110255,0.004447679],"study_design_scores_gemma":[0.002232623,0.0010709951,0.023217542,0.000030506308,0.000032314347,0.000010668549,0.0006777148,0.00038847548,0.9684552,0.0010459557,0.00257391,0.00026410818],"about_ca_topic_score_codex":0.00015785398,"about_ca_topic_score_gemma":0.00007506393,"teacher_disagreement_score":0.00982223,"about_ca_system_score_codex":0.000017126955,"about_ca_system_score_gemma":0.00005516014,"threshold_uncertainty_score":0.39194605},"labels":[],"label_agreement":null},{"id":"W4383868545","doi":"10.1007/978-1-0716-3323-6_2","title":"Cytosolic Calcium Measurement Utilizing a Single-Cell Biochip to Study the Effect of Curcumin and Resveratrol on a Single Glioma Cell","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Curcumin; Calcium; Cytosol; Biochip; Intracellular; Chemistry; Calcium in biology; Cell; Glioma; Biophysics; Single-cell analysis; Resveratrol; Biochemistry; Materials science; Biology; Nanotechnology; Cancer research","score_opus":0.18255398478289322,"score_gpt":0.46231010750890217,"score_spread":0.2797561227260089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4383868545","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9932665,0.000080151774,0.0042334106,0.00036832687,0.0003203157,0.0014129236,0.0000049252776,0.000047720652,0.00026571442],"genre_scores_gemma":[0.99805516,0.000006420341,0.0009443203,0.00075375393,0.000019478177,0.00016779514,1.6171614e-7,0.000029492938,0.000023428198],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98720545,0.010415493,0.00036035536,0.0009447705,0.00039976617,0.0006741857],"domain_scores_gemma":[0.9970915,0.002154302,0.000096282696,0.0005006971,0.000036157107,0.000121082376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004637221,0.0002505651,0.0003884848,0.00062862295,0.00018600914,0.000033887405,0.0006498383,0.000093037124,0.000005930427],"category_scores_gemma":[0.0028957608,0.00017408207,0.000080457925,0.0020556296,0.00037850204,0.000025199251,0.00051722355,0.0004118232,0.000019713756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003459227,0.0003558407,0.0008485058,0.000021729547,0.0000040967416,0.0003261504,0.00028811497,0.000041751766,0.99500877,0.000018458839,0.000016437662,0.002724252],"study_design_scores_gemma":[0.0011862797,0.009497466,0.0002271819,0.000009057445,0.000018736744,0.000016978875,0.0000628754,0.00021663264,0.98841965,0.00007915374,0.00012577484,0.00014019481],"about_ca_topic_score_codex":0.00001611765,"about_ca_topic_score_gemma":0.0000017773231,"teacher_disagreement_score":0.009886049,"about_ca_system_score_codex":0.00004273817,"about_ca_system_score_gemma":0.0000346372,"threshold_uncertainty_score":0.70988613},"labels":[],"label_agreement":null},{"id":"W4384303294","doi":"10.1007/978-1-0716-3327-4_21","title":"Discovering Protein–Protein Interactions using Co-Fractionation-Mass Spectrometry with Label-Free Quantitation","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Proteome; Fractionation; Mass spectrometry; Chemistry; Proteomics; Lysis; Computational biology; Chromatography; Biochemistry; Biology","score_opus":0.03771047109998642,"score_gpt":0.4406479039404146,"score_spread":0.40293743284042816,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384303294","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23578972,0.000025397161,0.7622214,0.00020039672,0.0000193975,0.00027376684,0.000025108215,0.00016459922,0.0012802049],"genre_scores_gemma":[0.06212871,0.000008610658,0.93694645,0.000022629425,0.00003473497,0.0005162764,0.000094476934,0.00003796359,0.00021016538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988446,0.00013064955,0.00028210584,0.00039132513,0.0000885883,0.00026269493],"domain_scores_gemma":[0.9991296,0.00013980402,0.00017078541,0.00046419434,0.00005881764,0.00003681244],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037336058,0.0001621573,0.00019220592,0.00028149618,0.00011747319,0.00002554649,0.00023958193,0.00012908231,0.00009037659],"category_scores_gemma":[0.00035453078,0.00016099882,0.000045420435,0.0007407195,0.00008222568,0.00011047567,0.00008031947,0.0003589627,0.000009295753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022672604,0.00003214601,0.00039679973,0.000027354527,0.000022190176,0.000007029761,0.000026039597,0.0006706208,0.97271717,0.02437258,0.0000022306363,0.0017031762],"study_design_scores_gemma":[0.00028912188,0.000030963423,0.00003472955,0.000060742794,0.000008831529,0.000009182516,0.00009668568,0.0050990684,0.9015272,0.09180014,0.00085275585,0.00019056801],"about_ca_topic_score_codex":0.00010251133,"about_ca_topic_score_gemma":0.000015482232,"teacher_disagreement_score":0.17472503,"about_ca_system_score_codex":0.00016209437,"about_ca_system_score_gemma":0.000042580636,"threshold_uncertainty_score":0.65653414},"labels":[],"label_agreement":null},{"id":"W4384346370","doi":"10.1007/978-1-0716-3327-4_29","title":"Predicting Protein Interaction Sites Using PITHIA","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Computer science; Work (physics); Human–computer interaction; Software engineering; Engineering; Mechanical engineering","score_opus":0.026333547261839382,"score_gpt":0.4007008054543611,"score_spread":0.3743672581925217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384346370","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5612896,0.00017546234,0.43786505,0.00003951251,0.0001552183,0.00020483049,0.000005121117,0.00003195146,0.00023326649],"genre_scores_gemma":[0.34070763,0.000023711747,0.65854317,0.00019454902,0.0001507703,0.000065097076,0.00017048308,0.000038591454,0.00010603057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982104,0.00064386916,0.00027797677,0.0004566521,0.00005772327,0.00035340156],"domain_scores_gemma":[0.999438,0.000029949555,0.000103014645,0.0003368387,0.000045501765,0.00004668069],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008243669,0.00017688052,0.00019480543,0.00018518344,0.000059029197,0.000015224078,0.00019674354,0.00032231113,0.00000904608],"category_scores_gemma":[0.0006139683,0.0001733211,0.00008841037,0.00037066112,0.00008299879,0.000003753098,0.0002442998,0.0002085199,0.0000052786445],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035770547,0.000009807047,0.007960752,0.000014858013,0.000027437329,0.000012917098,0.000027625973,0.00064990233,0.9851579,0.00048192666,0.0000073143033,0.0056137564],"study_design_scores_gemma":[0.00033648292,0.00018208417,0.0006403694,0.000023377374,0.00001182844,0.0000335034,0.000071944705,0.013796346,0.9749967,0.0076792673,0.0019767976,0.00025128867],"about_ca_topic_score_codex":0.000048968588,"about_ca_topic_score_gemma":0.00002555107,"teacher_disagreement_score":0.2206781,"about_ca_system_score_codex":0.00002602495,"about_ca_system_score_gemma":0.00004618258,"threshold_uncertainty_score":0.7067829},"labels":[],"label_agreement":null},{"id":"W4384346408","doi":"10.1007/978-1-0716-3327-4_4","title":"Detection of Protein–Protein Interactions Utilizing the Split-Ubiquitin Membrane-Based Yeast Two-Hybrid System","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Two-hybrid screening; Yeast; Ubiquitin; Protein–protein interaction; Transcription factor; Computational biology; cDNA library; DDB1; Bimolecular fluorescence complementation; Cell biology; Complementary DNA; Biology; Ubiquitin ligase; Chemistry; Biochemistry; Gene","score_opus":0.032674721102679646,"score_gpt":0.3888709564058514,"score_spread":0.35619623530317174,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384346408","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6923257,0.00031016447,0.30529857,0.00016005542,0.00018809835,0.0006682064,0.000031665517,0.00003343706,0.0009841105],"genre_scores_gemma":[0.9637782,0.000008909171,0.035442766,0.000048781145,0.000089539855,0.00033243292,0.000065655055,0.000034662455,0.00019904395],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970517,0.0015317101,0.00039467728,0.0004668113,0.00013697492,0.00041809512],"domain_scores_gemma":[0.99904627,0.0000700216,0.00012575972,0.0005690718,0.00012589818,0.00006298913],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017388181,0.00019341045,0.00024655688,0.00022853253,0.000096854776,0.000017025863,0.00038253842,0.00013915428,0.000015855383],"category_scores_gemma":[0.00042792634,0.00015518928,0.00016205583,0.0005102172,0.00020761373,0.0000022748818,0.00024334849,0.0002870045,0.000016238646],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012205391,0.000029555495,0.0000661376,0.00011571186,0.00003851585,0.000011296176,0.000014471375,0.00058719976,0.98571974,0.0006990343,0.0000030990418,0.01259317],"study_design_scores_gemma":[0.00045012668,0.00021329282,0.000071890514,0.00007288609,0.000010538402,0.000017889664,0.00016571644,0.0040749707,0.9918067,0.0003021562,0.0026609425,0.00015289869],"about_ca_topic_score_codex":0.00011618158,"about_ca_topic_score_gemma":0.00004756369,"teacher_disagreement_score":0.27145252,"about_ca_system_score_codex":0.000034838133,"about_ca_system_score_gemma":0.00009974335,"threshold_uncertainty_score":0.6328435},"labels":[],"label_agreement":null},{"id":"W4384663251","doi":"10.1007/978-1-0716-3307-6_2","title":"Enhanced Bystander BRET (ebBRET) Biosensors as Biophysical Tools to Map the Signaling Profile of Neuropsychiatric Drugs Targeting GPCRs","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"G protein-coupled receptor; Bioluminescence; Förster resonance energy transfer; Bystander effect; Energy transfer; Biosensor; Drug discovery; Chemistry; Computational biology; Nanotechnology; Biology; Signal transduction; Fluorescence; Biochemistry; Physics; Materials science","score_opus":0.015134696888300768,"score_gpt":0.345770585058885,"score_spread":0.33063588817058426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384663251","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61528134,0.0002486566,0.38301644,0.0003166342,0.00045218552,0.00043158396,0.000018443756,0.000028935652,0.00020580155],"genre_scores_gemma":[0.7552129,0.00006693354,0.24311383,0.00081095676,0.0002390363,0.00011663343,0.00013761033,0.000074512405,0.0002276149],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.996621,0.0013545298,0.00056884997,0.0007138521,0.0001642875,0.0005774759],"domain_scores_gemma":[0.99890596,0.00020658129,0.00018435031,0.00049264013,0.00011248697,0.000097956785],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017946274,0.00029089613,0.00040887474,0.00021462423,0.000100468416,0.000026684553,0.00049524795,0.00028811969,0.0000779696],"category_scores_gemma":[0.00073238544,0.00022818845,0.00023429506,0.0008941263,0.00012346987,0.0000041841486,0.00031460795,0.0002491242,0.000034774355],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009652666,0.000029816261,0.000030367895,0.000025418163,0.000046408917,0.0000059998265,0.0002176779,0.00082238606,0.99198824,0.0016849819,0.0001906218,0.0048615816],"study_design_scores_gemma":[0.00033063383,0.0004399208,0.00003324381,0.000019798697,0.00001811643,0.0000032086034,0.0004528439,0.0003124053,0.9935697,0.0022389584,0.0023070113,0.00027420567],"about_ca_topic_score_codex":0.000026275238,"about_ca_topic_score_gemma":0.0000011038902,"teacher_disagreement_score":0.13993154,"about_ca_system_score_codex":0.000016680699,"about_ca_system_score_gemma":0.00008006271,"threshold_uncertainty_score":0.9305255},"labels":[],"label_agreement":null},{"id":"W4384663563","doi":"10.1007/978-1-0716-3259-8_2","title":"Analysis of C. elegans Germline Small RNA Pathways","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetics, Aging, and Longevity in Model Organisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Biology; RNA; Genetics; Transfer RNA; Argonaute; Computational biology; Gene; Small RNA; Deep sequencing; Germline; RNA interference; Genome","score_opus":0.0327212610224944,"score_gpt":0.35577840605605876,"score_spread":0.32305714503356436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384663563","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49598834,0.0004399897,0.5029454,0.00006604895,0.00013929918,0.000106889354,0.000030647938,0.00002041613,0.00026298003],"genre_scores_gemma":[0.6147956,0.0003832882,0.38342184,0.00043372042,0.000077557495,0.000035426874,0.000568964,0.00004970143,0.00023384596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974924,0.0008142817,0.00052020303,0.00061910483,0.00008872315,0.00046529702],"domain_scores_gemma":[0.9988171,0.00007368491,0.00016368214,0.0007604841,0.000102434424,0.00008261271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014969264,0.00024096684,0.00054785947,0.00060556934,0.00003653064,0.000008839279,0.00044812344,0.00038415787,0.000032124208],"category_scores_gemma":[0.00043393488,0.00024403654,0.00032548507,0.0012649139,0.00018685685,0.0000012907946,0.00028272363,0.00016366279,0.000007386408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021364942,0.000056095978,0.0065674,0.000017220258,0.00045756705,0.000019061852,0.00018240728,0.0035672046,0.98219824,0.0006453027,0.000028798882,0.00623934],"study_design_scores_gemma":[0.0004176868,0.00026192624,0.008092781,0.0000052467662,0.0002999295,0.000004591248,0.00007515865,0.0038126023,0.9824002,0.0020519507,0.002257286,0.00032064333],"about_ca_topic_score_codex":0.00008895929,"about_ca_topic_score_gemma":0.00014006718,"teacher_disagreement_score":0.11952356,"about_ca_system_score_codex":0.000014079705,"about_ca_system_score_gemma":0.0000647855,"threshold_uncertainty_score":0.9951521},"labels":[],"label_agreement":null},{"id":"W4384788719","doi":"10.1007/978-1-0716-3307-6","title":"Schizophrenia","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Autism Spectrum Disorder Research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Infection and Immunity; Instituto de Salud Carlos III; School of Medicine, Virginia Commonwealth University; Universidad de Valladolid; Euskal Herriko Unibertsitatea; Biocruces Bizkaia es el Instituto de Investigación Sanitaria; Virginia Commonwealth University","keywords":"Schizophrenia (object-oriented programming); Psychology; Psychiatry","score_opus":0.06556016829907994,"score_gpt":0.4435641847364621,"score_spread":0.37800401643738213,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4384788719","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000069915586,0.0010778271,0.49613822,0.0018432685,0.0012187007,0.0010013229,0.00007183606,0.00042470705,0.49815422],"genre_scores_gemma":[0.000028381071,0.00048523306,0.29856405,0.0007838398,0.00011213061,0.00017881981,0.00004632049,0.00025768334,0.69954354],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9940155,0.003082925,0.00048048,0.0013237561,0.0002532293,0.0008440693],"domain_scores_gemma":[0.9973781,0.0014138728,0.00015772828,0.00093884446,0.000008842531,0.00010262863],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0014749283,0.000408204,0.00068297645,0.0009507865,0.0000679458,0.00003187702,0.0012061043,0.00087264495,0.00029278098],"category_scores_gemma":[0.00301927,0.00040950783,0.00020659438,0.00062003837,0.0005290071,0.000021296188,0.0008947447,0.0015826152,0.0011181727],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037061054,0.000024054425,0.000008422078,0.000040822342,0.000012430546,0.00059648324,0.00003071291,0.0000066964517,0.40989533,0.56445,0.0007604801,0.02413748],"study_design_scores_gemma":[0.00037589532,0.0001097529,0.000012684948,0.00004093292,0.000008718,0.000023127448,0.0000011320349,0.000115712806,0.10190844,0.8256701,0.071341544,0.0003919249],"about_ca_topic_score_codex":0.00001683738,"about_ca_topic_score_gemma":0.000018970435,"teacher_disagreement_score":0.30798692,"about_ca_system_score_codex":0.00021033105,"about_ca_system_score_gemma":0.0004988776,"threshold_uncertainty_score":0.99983567},"labels":[],"label_agreement":null},{"id":"W4385586262","doi":"10.1007/978-1-0716-3299-4","title":"Flower Development","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant Reproductive Biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional; Agricultural Research Service; F. Hoffmann-La Roche; Ministère de l'Éducation Nationale; Centre National de la Recherche Scientifique; Chinese Academy of Sciences; Universitat Pompeu Fabra; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; State Key Laboratory of Genetic Engineering; U.S. Department of Agriculture; Les Laboratories Pierre Fabre; Fudan University; Oregon State University","keywords":"Development (topology); Mathematics","score_opus":0.027388214458426232,"score_gpt":0.3775414574300901,"score_spread":0.3501532429716639,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385586262","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024305426,0.009455877,0.7818168,0.0002411548,0.0046750274,0.0016173294,0.00017887927,0.00020663945,0.19937776],"genre_scores_gemma":[0.000013303938,0.00029714112,0.49727514,0.00045296858,0.00048299215,0.00017656886,0.0029179547,0.00016805358,0.49821585],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9957495,0.0010256529,0.00068666105,0.001708323,0.000111937385,0.0007179295],"domain_scores_gemma":[0.9983523,0.00010513684,0.0002456023,0.0010825453,0.00011092379,0.000103530925],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019052081,0.00061502866,0.0007754093,0.00040090864,0.00005058352,0.0000110042165,0.0007120215,0.0018241267,0.000047044337],"category_scores_gemma":[0.0009159219,0.0006086842,0.00022336694,0.00015800475,0.000307609,0.0000011458451,0.0007963502,0.00058851426,0.00020179254],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078544035,0.00004000371,0.0001793418,0.00004561523,0.00028226417,0.0001155978,0.000025059628,0.000015492718,0.9697174,0.0016819146,0.0090906285,0.018728174],"study_design_scores_gemma":[0.00030360874,0.00015114811,0.00009649188,0.000038608137,0.000022555332,0.00004980564,0.0000041084136,0.0000026561713,0.20666166,0.006067665,0.785952,0.0006497416],"about_ca_topic_score_codex":0.000005021564,"about_ca_topic_score_gemma":0.00007131282,"teacher_disagreement_score":0.7768613,"about_ca_system_score_codex":0.00015170948,"about_ca_system_score_gemma":0.00081191293,"threshold_uncertainty_score":0.9996365},"labels":[],"label_agreement":null},{"id":"W4385704156","doi":"10.1007/978-1-0716-3397-7_10","title":"Measuring Protein–Protein Interactions in Cells using Nanoluciferase Bioluminescence Resonance Energy Transfer (NanoBRET) Assay","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Structural Genomics Consortium","funders":"","keywords":"Bioluminescence; Förster resonance energy transfer; Fusion protein; Protein–protein interaction; Chemistry; Green fluorescent protein; Biophysics; Transfection; Fluorescence; Cell biology; Biochemistry; Computational biology; Biology; Recombinant DNA; Gene","score_opus":0.057197570440392455,"score_gpt":0.3818454752464748,"score_spread":0.3246479048060823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385704156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.66773087,0.001048462,0.33010626,0.000181041,0.00019577664,0.00048584852,0.000018643035,0.00004442225,0.00018867284],"genre_scores_gemma":[0.924684,0.0002914813,0.073350355,0.0001622493,0.00014994202,0.00041199673,0.0001124033,0.000080903614,0.00075667666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99545366,0.0014656656,0.0006662879,0.0011364394,0.00020538614,0.0010725799],"domain_scores_gemma":[0.9988325,0.000066561806,0.00007842621,0.0007323645,0.00014393101,0.00014619496],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0020192158,0.00041110645,0.00046897764,0.0005369269,0.00010166223,0.00003380473,0.0006550697,0.00045266192,0.000023813427],"category_scores_gemma":[0.00053587346,0.00042210676,0.00018978787,0.0015887021,0.00033877208,0.000019863191,0.0003115388,0.00044533118,0.000012004123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011271001,0.00010980759,0.002812033,0.000050449966,0.000018733823,0.00008351613,0.000036124326,0.00003687849,0.9841215,0.000207603,0.000020662095,0.012389968],"study_design_scores_gemma":[0.0006192278,0.00010930893,0.00019520176,0.0002108101,0.000006184648,0.00001988213,0.00007652588,0.0010618841,0.9918002,0.00038096614,0.0050414777,0.00047835545],"about_ca_topic_score_codex":0.0005606162,"about_ca_topic_score_gemma":0.00035103573,"teacher_disagreement_score":0.2569531,"about_ca_system_score_codex":0.00010778588,"about_ca_system_score_gemma":0.00022781506,"threshold_uncertainty_score":0.9998231},"labels":[],"label_agreement":null},{"id":"W4385711956","doi":"10.1007/978-1-0716-3397-7_15","title":"3D Spheroid Invasion Assay for High-Throughput Screening of Small-Molecule Libraries","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Structural Genomics Consortium; Princess Margaret Cancer Centre; University Health Network","funders":"","keywords":"Gentamicin protection assay; Cancer cell; High-throughput screening; Cancer; Spheroid; Biology; Ex vivo; In vitro; Metastasis; Cell; Throughput; Small molecule; Cancer research; In vivo; Cell biology; Chemistry; Bioinformatics; Biochemistry; Genetics; Computer science","score_opus":0.03189580874010965,"score_gpt":0.3681582543625443,"score_spread":0.3362624456224346,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385711956","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05995092,0.0007952931,0.9381103,0.00012127895,0.000055693174,0.0003888672,0.000012293476,0.00006753755,0.00049780536],"genre_scores_gemma":[0.02855147,0.0002135782,0.9697108,0.00036405315,0.00006781667,0.00015639627,0.0005928394,0.00006304598,0.00027997582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99718666,0.0010300757,0.00054100837,0.00070759526,0.00008209407,0.0004525424],"domain_scores_gemma":[0.9986558,0.00022654589,0.0002133254,0.00072585285,0.000121612335,0.000056887144],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0021061185,0.0002620805,0.00049102877,0.00026562702,0.00005487555,0.000019379315,0.0004694724,0.00043449548,0.00001870496],"category_scores_gemma":[0.001530874,0.0002632592,0.00023569606,0.00060619094,0.00023683929,0.0000058826295,0.0005147999,0.00015175533,0.0000026852579],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007620453,0.000041496467,0.0010177996,0.00003881132,0.00010364756,0.000009935675,0.000024223047,0.00009582202,0.97431296,0.0011961643,0.000543985,0.02253894],"study_design_scores_gemma":[0.00050119613,0.00037921107,0.00015898504,0.000021347178,0.000044273504,0.0000039416987,0.00004302783,0.0007278948,0.98568934,0.0057493695,0.006414078,0.0002673153],"about_ca_topic_score_codex":0.00008735564,"about_ca_topic_score_gemma":0.000037559435,"teacher_disagreement_score":0.031600513,"about_ca_system_score_codex":0.000012219457,"about_ca_system_score_gemma":0.000068497015,"threshold_uncertainty_score":0.99998194},"labels":[],"label_agreement":null},{"id":"W4385712018","doi":"10.1007/978-1-0716-3397-7_11","title":"HiBiT Cellular Thermal Shift Assay (HiBiT CETSA)","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Structural Genomics Consortium; University of Toronto","funders":"Natural Sciences and Engineering Research Council of Canada; Genentech; Mitacs; Ontario Genomics Institute; European Federation of Pharmaceutical Industries and Associations; Merck KGaA; Ontario Genomics; Genome Canada; Diamond Light Source; McGill University; Bayer; European Commission; Pfizer; Bristol-Myers Squibb","keywords":"Complementation; Chemistry; Materials science; Gene; Biochemistry; Phenotype","score_opus":0.027265211688950526,"score_gpt":0.393322700631562,"score_spread":0.3660574889426115,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385712018","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.692087,0.0018258502,0.29967394,0.0017504457,0.00048720138,0.0005406216,0.00002613705,0.00011791182,0.0034908662],"genre_scores_gemma":[0.89455026,0.00037342162,0.101589106,0.0005932661,0.00045238025,0.0002063873,0.0006825687,0.00011105195,0.0014415835],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9961895,0.0012407397,0.00043745874,0.0009253503,0.0001852593,0.0010217049],"domain_scores_gemma":[0.9987379,0.00010209552,0.00009279533,0.0008200946,0.00008240502,0.00016475513],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019198345,0.0003406711,0.00038505677,0.00026111124,0.000096539916,0.00002898341,0.0006987256,0.0006821966,0.00008561639],"category_scores_gemma":[0.00070359686,0.00031997397,0.0002217342,0.0008192474,0.00040005287,0.0000065367585,0.0005410546,0.00039436232,0.000119939126],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047310474,0.000059790946,0.008763033,0.000029186107,0.00003700833,0.00012365576,0.00003974269,0.0000117114,0.9786155,0.00039478423,0.0003566144,0.01152164],"study_design_scores_gemma":[0.0004958846,0.00019727171,0.00092527183,0.000019326766,0.000010663118,0.000016921693,0.000071866205,0.00018135426,0.98213875,0.0010257283,0.014522895,0.00039406196],"about_ca_topic_score_codex":0.00004916367,"about_ca_topic_score_gemma":0.000018577202,"teacher_disagreement_score":0.20246321,"about_ca_system_score_codex":0.000030198466,"about_ca_system_score_gemma":0.00012675913,"threshold_uncertainty_score":0.99992526},"labels":[],"label_agreement":null},{"id":"W4385712097","doi":"10.1007/978-1-0716-3397-7","title":"Chemogenomics","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"UNC Eshelman School of Pharmacy, University of North Carolina at Chapel Hill; National Cancer Institute; University of North Carolina at Chapel Hill; National Institute for Health and Care Research; Eidgenössische Technische Hochschule Zürich; University of Toronto; University of Oxford; University of Dundee","keywords":"Profiling (computer programming); Computational biology; Biology; Computer science","score_opus":0.03560796768434636,"score_gpt":0.398257612627687,"score_spread":0.3626496449433406,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385712097","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047950982,0.0047586407,0.7183616,0.00047665767,0.0022202716,0.0012790116,0.00027912296,0.000094363946,0.2720508],"genre_scores_gemma":[0.000018132649,0.0038405687,0.43099773,0.0010309034,0.00068500446,0.000092432616,0.0025339522,0.0001967616,0.5606045],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99673855,0.00050713914,0.000800415,0.0008598564,0.00023496026,0.0008590753],"domain_scores_gemma":[0.9982619,0.0001302291,0.00022413042,0.0010153316,0.00013891923,0.0002294395],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0021780445,0.0005087198,0.00068302953,0.00041949723,0.0000508894,0.000029541294,0.0009669782,0.0019669747,0.000057088437],"category_scores_gemma":[0.0013099853,0.000493008,0.0003426641,0.00019116841,0.0005864619,0.0000012217267,0.0010060092,0.00072340004,0.00021132639],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090400295,0.000068705864,0.00008916327,0.00027894336,0.00030758177,0.00007928022,0.000054997927,0.000021055715,0.86606413,0.0020952197,0.027108222,0.10374228],"study_design_scores_gemma":[0.0006932403,0.0005598679,0.00003119407,0.000064326676,0.000039595434,0.000023135575,0.000023974639,0.00014357657,0.11617978,0.030092811,0.8513629,0.0007855852],"about_ca_topic_score_codex":0.0000097174025,"about_ca_topic_score_gemma":0.000031765165,"teacher_disagreement_score":0.8242547,"about_ca_system_score_codex":0.00011750967,"about_ca_system_score_gemma":0.0007480105,"threshold_uncertainty_score":0.99975216},"labels":[],"label_agreement":null},{"id":"W4385790106","doi":"10.1007/978-1-0716-3373-1_13","title":"Using Affinity Pulldown Assays to Study Protein–Protein Interactions of Human NEIL1 Glycosylase and the Checkpoint Protein RAD9–RAD1–HUS1 (9-1-1) Complex","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Cancer Institute; Houston Methodist Research Institute; Lawrence Berkeley National Laboratory; National Institutes of Health; Queen's University","keywords":"Fusion protein; DNA Damage Repair; Protein–protein interaction; DNA glycosylase; Biology; Computational biology; DNA repair; Biochemistry; DNA; Recombinant DNA; Gene","score_opus":0.06931248708589818,"score_gpt":0.42970032568493377,"score_spread":0.36038783859903556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4385790106","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7462504,0.00006172682,0.25082773,0.00027523996,0.00005698305,0.0022895003,0.000021991566,0.000022489992,0.00019393998],"genre_scores_gemma":[0.8712422,0.000004654309,0.12776195,0.00012643043,0.000040702296,0.00067353214,0.000028765719,0.000038180493,0.000083549596],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99622256,0.001888776,0.00060482055,0.0006906952,0.00013471249,0.00045843908],"domain_scores_gemma":[0.99878097,0.000059346494,0.00024263196,0.00069114973,0.00011447843,0.00011145095],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0028218834,0.0003106719,0.00052446424,0.00020964125,0.00017987337,0.000027237465,0.00044770938,0.00019149105,0.000030260686],"category_scores_gemma":[0.0010855112,0.00024553796,0.00014333174,0.00051394454,0.00026486465,0.000005172981,0.0007055244,0.00028209083,0.0000029944629],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002851073,0.00026287607,0.000026941903,0.000040449384,0.000092204325,0.000014112115,0.00020127391,0.000037063055,0.9939818,0.002610642,0.0000020302903,0.0024455318],"study_design_scores_gemma":[0.0016834975,0.0009774397,0.000064751315,0.000046733705,0.000036052978,0.000018626726,0.00040963938,0.00050518377,0.980891,0.014512469,0.00058751384,0.00026707572],"about_ca_topic_score_codex":0.0002727158,"about_ca_topic_score_gemma":0.000100461184,"teacher_disagreement_score":0.12499184,"about_ca_system_score_codex":0.000027833536,"about_ca_system_score_gemma":0.00007996293,"threshold_uncertainty_score":0.9999997},"labels":[],"label_agreement":null},{"id":"W4386019255","doi":"10.1007/978-1-0716-3366-3_2","title":"Development of Optimal Virtual Screening Strategies to Identify Novel Toll-Like Receptor Ligands Using the DockBox Suite","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Virtual screening; Toll; Suite; Toll-like receptor; Computational biology; Computer science; Receptor; Set (abstract data type); Medicine; Biology; Bioinformatics; Immunology; Innate immune system; Drug discovery; Geography; Genetics","score_opus":0.052508092693867435,"score_gpt":0.41640780639367625,"score_spread":0.36389971369980884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386019255","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.497882,0.00019457209,0.50127363,0.000077368924,0.00036651452,0.00015194397,0.0000032760577,0.000025251005,0.000025463514],"genre_scores_gemma":[0.16624364,0.000023311179,0.8330628,0.0001578673,0.000022282125,0.00005994833,0.00012724774,0.000029213168,0.00027367676],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777776,0.00084580615,0.0006013424,0.0003069681,0.000039147984,0.00042896986],"domain_scores_gemma":[0.999094,0.00036387323,0.00015598154,0.00029904296,0.000071481845,0.000015623486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002867957,0.00018658514,0.00034927853,0.00040016795,0.00016402114,0.00001896551,0.00036308065,0.0003066793,0.000056645113],"category_scores_gemma":[0.00032669638,0.00014692401,0.000090477675,0.0006062457,0.00016993008,0.000061329105,0.00032998828,0.0002650504,0.000050253737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019281336,0.000019480172,0.00008075272,0.000007557483,0.00012781685,0.0000027992298,0.0022599457,0.0014776614,0.97604376,0.001646674,0.000026113417,0.018114602],"study_design_scores_gemma":[0.00052174507,0.00010886851,0.0011501737,0.00004000216,0.000016851765,0.000018291668,0.002830626,0.00017431025,0.981722,0.00007322642,0.0131669175,0.00017700496],"about_ca_topic_score_codex":0.00003837009,"about_ca_topic_score_gemma":0.000008275164,"teacher_disagreement_score":0.3317892,"about_ca_system_score_codex":0.000036895846,"about_ca_system_score_gemma":0.0001609421,"threshold_uncertainty_score":0.59913874},"labels":[],"label_agreement":null},{"id":"W4386084123","doi":"10.1007/978-1-0716-3283-3_20","title":"Host Transcriptome Analysis of Ferret Tissues Following Henipavirus Infection","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Transcriptome; Biology; Genome; Hendra Virus; Gene; Gene expression; Virology; Gene expression profiling; Host (biology); Genetics; Computational biology; Virus","score_opus":0.06794265649060767,"score_gpt":0.41602046058115616,"score_spread":0.3480778040905485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386084123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97547257,0.00029850865,0.022966804,0.00036074888,0.0001622432,0.00012578668,0.000016513073,0.00007678652,0.00052003615],"genre_scores_gemma":[0.9874147,0.00013827423,0.011848614,0.00025513867,0.000026237538,0.000029584906,0.00020978274,0.0000013836882,0.00007627954],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978437,0.0011469118,0.00032731632,0.00032659344,0.00005858395,0.00029690025],"domain_scores_gemma":[0.99944836,0.00034144858,0.00007942176,0.00006995981,0.000017132412,0.00004370784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014461223,0.00012325955,0.00046814975,0.00019278648,0.000045811146,0.0000065135378,0.00016708196,0.00015229173,0.00015171745],"category_scores_gemma":[0.00028420478,0.000057854242,0.00037335668,0.0025877885,0.00006569448,0.00002844435,0.0000764221,0.000087951725,0.000012877002],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016577902,0.000022084187,0.19642389,0.0000041261824,0.00024679923,0.000011209517,0.00003131002,0.0000636425,0.7839558,0.0014909393,0.000020832525,0.017712789],"study_design_scores_gemma":[0.00012932664,0.00023038368,0.9775406,0.000007061218,0.000430791,2.8747726e-7,0.000092645256,0.0017966848,0.008358473,0.005225145,0.0059868023,0.00020179982],"about_ca_topic_score_codex":0.0009409938,"about_ca_topic_score_gemma":0.00040010212,"teacher_disagreement_score":0.7811167,"about_ca_system_score_codex":0.000013248534,"about_ca_system_score_gemma":0.0000022904917,"threshold_uncertainty_score":0.23592275},"labels":[],"label_agreement":null},{"id":"W4386271268","doi":"10.1007/978-1-0716-3389-2_12","title":"An Overview to the Index to Chromosome Numbers in Asteraceae Database: Revisiting Base Chromosome Numbers, Polyploidy, Descending Dysploidy, and Hybridization","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sesquiterpenes and Asteraceae Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Asteraceae; Biology; Phylogenetic tree; Evolutionary biology; Heliantheae; Senecioneae; Chromosome; Geography; Genetics; Botany","score_opus":0.037071880125371014,"score_gpt":0.4105033150342943,"score_spread":0.37343143490892333,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386271268","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.888827,0.0034276946,0.10496264,0.0014843859,0.00032575382,0.0007567641,0.00009530017,0.000038529997,0.00008191464],"genre_scores_gemma":[0.8338567,0.0018448005,0.15775105,0.004831285,0.0004352746,0.0002940036,0.00075187953,0.00012634945,0.00010865537],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964696,0.0013075668,0.000499257,0.00094981014,0.0001263897,0.00064733997],"domain_scores_gemma":[0.99884623,0.00012416714,0.0001108994,0.0006988935,0.000057016103,0.00016279965],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019655859,0.00033860625,0.00042884858,0.00030177305,0.00014015399,0.00006813749,0.0004179144,0.00016152955,0.000021021036],"category_scores_gemma":[0.0006315108,0.00029602952,0.00007083367,0.0010571416,0.000082581464,0.000019447381,0.0008078335,0.00021274303,0.00001899979],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004933164,0.000028896053,0.026046919,0.00006278667,0.00003691025,0.00005088916,0.00037505882,0.0005296199,0.9501497,0.00028209537,0.00009377787,0.022294017],"study_design_scores_gemma":[0.0039423606,0.001720049,0.0551892,0.0015399767,0.00013292304,0.00032116755,0.005063312,0.0064297556,0.83090156,0.0009102375,0.090562895,0.0032865524],"about_ca_topic_score_codex":0.00022529591,"about_ca_topic_score_gemma":0.00028551003,"teacher_disagreement_score":0.11924813,"about_ca_system_score_codex":0.000050292667,"about_ca_system_score_gemma":0.00004455712,"threshold_uncertainty_score":0.99994916},"labels":[],"label_agreement":null},{"id":"W4386271771","doi":"10.1007/978-1-0716-3362-5_8","title":"Magnetic Nanoparticles for Protein Separation and Purification","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein purification and stability","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Protein purification; Magnetic nanoparticles; Biomolecule; Chemistry; Extraction (chemistry); Nanoparticle; Chromatography; Bioavailability; Nanotechnology; Materials science; Biochemistry; Biology; Bioinformatics","score_opus":0.029036868727504158,"score_gpt":0.4015257267828081,"score_spread":0.37248885805530396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386271771","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5159118,0.0011725656,0.48130858,0.0005880177,0.000049336806,0.0008251134,0.000010843227,0.000026987094,0.00010673722],"genre_scores_gemma":[0.5113471,0.00008243109,0.48675182,0.0001582604,0.000035053643,0.0011209332,0.00018660816,0.00001897679,0.00029881904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986342,0.000502041,0.00022426355,0.0003978854,0.000033833545,0.00020777137],"domain_scores_gemma":[0.99954003,0.000029224153,0.00005148974,0.00028672343,0.000052088228,0.00004046048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012409808,0.00010064428,0.00011902758,0.000080419035,0.000047963764,0.000012813176,0.000103250175,0.00016575714,0.000004919113],"category_scores_gemma":[0.0006824269,0.00010045034,0.000039086808,0.0001896868,0.00010570617,0.000002382711,0.000053126245,0.000049201095,0.0000042113647],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004312566,0.000019954156,0.0004963921,0.000017483706,0.0000047917174,3.381024e-7,0.00002435936,0.000009510692,0.9543048,0.005486165,0.00001557052,0.03957748],"study_design_scores_gemma":[0.0003895137,0.00024889925,0.0025361378,0.0000033132674,0.0000046184928,0.0000020136001,0.00002743505,0.0007581133,0.96054083,0.016783474,0.018580206,0.0001254556],"about_ca_topic_score_codex":0.000005075763,"about_ca_topic_score_gemma":0.000007779206,"teacher_disagreement_score":0.039452024,"about_ca_system_score_codex":0.000008577834,"about_ca_system_score_gemma":0.000029904304,"threshold_uncertainty_score":0.4096246},"labels":[],"label_agreement":null},{"id":"W4386407117","doi":"10.1007/978-1-0716-3457-8_6","title":"Improved Coverage of the N-Terminome by Combining ChaFRADIC with Alternative Proteases","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; CancerCare Manitoba; Research Manitoba","funders":"","keywords":"Trypsin; Subtilisin; Cleavage (geology); Proteases; Proteolysis; Protease; Biochemistry; UniProt; Chemistry; In silico; Amino acid; Proteolytic enzymes; Computational biology; Biology; Enzyme; Gene","score_opus":0.016900134805105337,"score_gpt":0.3715743645736986,"score_spread":0.35467422976859325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386407117","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17459635,0.00006800798,0.82390976,0.00012332892,0.000013921069,0.00029747337,0.0000474708,0.000053565127,0.00089011324],"genre_scores_gemma":[0.29453582,0.000057807854,0.7041578,0.000119420416,0.000012029913,0.00075858517,0.000038770664,0.000029503532,0.00029022264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99925816,0.00012394735,0.0001808366,0.00022914968,0.000037937207,0.0001699604],"domain_scores_gemma":[0.9993378,0.000118255215,0.00015367701,0.00034777893,0.000022675442,0.000019832814],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002324657,0.0001045697,0.00017804948,0.000037728434,0.000036509227,0.0000035781718,0.00029067506,0.00008792539,0.00001982445],"category_scores_gemma":[0.000097629934,0.00007391261,0.000043971617,0.0002425294,0.00015593275,0.000011774068,0.00013840149,0.00019152384,5.158332e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012879411,0.000021644151,0.0008871188,0.000018833865,0.000013962938,0.000002470581,0.000041482075,0.000033726395,0.989791,0.0028241067,0.000004553781,0.0063482453],"study_design_scores_gemma":[0.0002627057,0.00004032794,0.000020410447,0.00002680062,0.000005620258,0.0000044798685,0.000018205279,0.0010572135,0.9648089,0.03276955,0.0008956023,0.000090185975],"about_ca_topic_score_codex":0.000042415253,"about_ca_topic_score_gemma":0.0000011256149,"teacher_disagreement_score":0.11993944,"about_ca_system_score_codex":0.00002469228,"about_ca_system_score_gemma":0.000021432234,"threshold_uncertainty_score":0.3014069},"labels":[],"label_agreement":null},{"id":"W4386408009","doi":"10.1007/978-1-0716-3457-8_3","title":"Studying Cellular Dynamics Using Proximity-Dependent Biotinylation: Somatic Cell Reprogramming","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"","keywords":"Biotinylation; Reprogramming; Context (archaeology); Computational biology; Protein Data Bank (RCSB PDB); Cell biology; Biology; Computer science; Cell; Biochemistry","score_opus":0.03425981798112352,"score_gpt":0.3741213175344955,"score_spread":0.33986149955337197,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386408009","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39829096,0.0019143674,0.59813017,0.000119608005,0.00045346908,0.0004230641,0.000005528192,0.00006820549,0.00059462874],"genre_scores_gemma":[0.3403001,0.0003210711,0.65838647,0.00012819152,0.00012499362,0.000048486978,0.0001747569,0.00007393668,0.0004419889],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99705267,0.000993795,0.00050241617,0.0007537328,0.00011573203,0.0005816563],"domain_scores_gemma":[0.9990841,0.00006137058,0.0001764098,0.00053940946,0.00006958722,0.00006909098],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017694582,0.00028930145,0.00035912707,0.00024648808,0.00017352577,0.000026469012,0.00028885406,0.00053448736,0.0000060704133],"category_scores_gemma":[0.00030867397,0.00027329836,0.00015437634,0.0006119892,0.00016097167,0.000003918108,0.000488688,0.00032056172,0.000011451116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016073174,0.000073722826,0.008648406,0.00006326786,0.0000864559,0.000045337856,0.00011392316,0.0007330183,0.9814663,0.00025630422,0.000007723002,0.008489459],"study_design_scores_gemma":[0.0008523819,0.00024916176,0.00035873285,0.00004063782,0.000065960805,0.00002288734,0.000827585,0.016238771,0.97816086,0.0017228965,0.0009448894,0.00051525614],"about_ca_topic_score_codex":0.00003491139,"about_ca_topic_score_gemma":0.00001889505,"teacher_disagreement_score":0.060256287,"about_ca_system_score_codex":0.000059502585,"about_ca_system_score_gemma":0.000056610737,"threshold_uncertainty_score":0.9999719},"labels":[],"label_agreement":null},{"id":"W4386437954","doi":"10.1007/978-1-0716-3401-1_19","title":"Mutation Knock-in Methods Using Single-Stranded DNA and Gene Editing Tools in Zebrafish","year":2023,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"CRISPR; Cas9; Genome editing; Zebrafish; Computational biology; DNA; Guide RNA; Point mutation; Mutant; Biology; Gene knockin; Genetics; Gene","score_opus":0.09629697185933733,"score_gpt":0.5185088781259714,"score_spread":0.422211906266634,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386437954","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0011650246,0.503618,0.49433172,0.00000632369,0.00034061275,0.00046255134,0.000017283077,0.00001441216,0.000044104898],"genre_scores_gemma":[0.000034486246,0.38307285,0.6162052,0.000031750253,0.00017507077,0.000106526415,0.0002638873,0.000097363445,0.000012848183],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9946155,0.0026053772,0.0010743501,0.0010100135,0.00007468171,0.0006201024],"domain_scores_gemma":[0.99884987,0.0003635456,0.00023712812,0.00043679881,0.000034057124,0.00007863008],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0030970848,0.0005297953,0.0014395665,0.0006520252,0.000029247913,0.000037183498,0.00028796063,0.0010741985,0.000004085198],"category_scores_gemma":[0.0015439843,0.0005538917,0.00024627004,0.00069736125,0.00010067417,0.0000048120014,0.00029405137,0.00050552475,9.910483e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006753073,0.000024183972,0.000015910886,0.0010897014,0.000055737208,0.000074486146,0.000039117178,0.00032119107,0.41672418,0.000018731991,0.0000013429915,0.5816287],"study_design_scores_gemma":[0.003823505,0.0007910023,0.000111883,0.008771719,0.000737334,0.00089928095,0.00029415908,0.0042389133,0.66879976,0.0031843763,0.3044936,0.0038544494],"about_ca_topic_score_codex":0.00004671803,"about_ca_topic_score_gemma":0.00008541627,"teacher_disagreement_score":0.5777742,"about_ca_system_score_codex":0.000091912865,"about_ca_system_score_gemma":0.000117059586,"threshold_uncertainty_score":0.99969125},"labels":[],"label_agreement":null},{"id":"W4386437965","doi":"10.1007/978-1-0716-3401-1_1","title":"Delivering Traumatic Brain Injury to Larval Zebrafish","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Zebrafish Biomedical Research Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Traumatic brain injury; Zebrafish; Neuroscience; Medicine; Computer science; Bioinformatics; Biology","score_opus":0.038567529985834334,"score_gpt":0.44939285269553747,"score_spread":0.4108253227097031,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386437965","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35449684,0.00009247634,0.6419132,0.0023875255,0.00009875982,0.00042580737,0.000027632974,0.000057246976,0.0005005713],"genre_scores_gemma":[0.18137568,0.00012188943,0.8094085,0.0068112845,0.00022880537,0.00094996,0.00045524532,0.000112427195,0.0005362453],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99732584,0.00083574833,0.00035963458,0.00065073394,0.00015019771,0.00067782484],"domain_scores_gemma":[0.99883467,0.0001738717,0.000046984525,0.000620513,0.000063548934,0.000260403],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00211883,0.00019476988,0.00025678013,0.0003664065,0.00006186341,0.000020924794,0.0005810028,0.00030192436,0.00004893452],"category_scores_gemma":[0.0033219063,0.00019879859,0.00010984869,0.0011213955,0.00016776242,0.0000026571013,0.00056605315,0.00023131828,0.00015390274],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040315925,0.000035203586,0.00026265596,0.00001376976,0.000028477494,0.00001287413,0.00005241145,0.000030411396,0.9447435,0.0007126881,0.0017358719,0.052331835],"study_design_scores_gemma":[0.00067529647,0.0008573481,0.0037526053,0.000029052528,0.000009991318,0.000014312214,0.000120191224,0.0008913216,0.8492948,0.006868612,0.13697667,0.00050980365],"about_ca_topic_score_codex":0.000058699028,"about_ca_topic_score_gemma":0.000054055155,"teacher_disagreement_score":0.17312114,"about_ca_system_score_codex":0.00003602671,"about_ca_system_score_gemma":0.000091704074,"threshold_uncertainty_score":0.8106771},"labels":[],"label_agreement":null},{"id":"W4386438443","doi":"10.1007/978-1-0716-3393-9_11","title":"Inhibitor Library Screening of SH2 Domains Through Denaturation-Based Assays","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dairy Farmers of Ontario; University of Toronto","funders":"","keywords":"Chemistry; Denaturation (fissile materials); Phosphopeptide; Ligand (biochemistry); Fluorescence; Context (archaeology); Target protein; Biophysics; Protein–protein interaction; Combinatorial chemistry; Biochemistry; Biology; Peptide; Receptor","score_opus":0.01923880991915812,"score_gpt":0.36123977208265445,"score_spread":0.34200096216349635,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386438443","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.21258475,0.00065255904,0.78513265,0.00048303744,0.00007561227,0.00011050549,0.0000297408,0.00003205889,0.00089909136],"genre_scores_gemma":[0.3009648,0.000093556024,0.69769245,0.00052728195,0.00009892787,0.000031798874,0.00046312172,0.000033135522,0.000094952295],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99820554,0.00062675163,0.00037287342,0.00043044888,0.00008231701,0.00028208015],"domain_scores_gemma":[0.99925274,0.0001792382,0.00012046069,0.00036908075,0.000032570657,0.000045890418],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00056027377,0.00016700185,0.00030886274,0.0001266545,0.00003529553,0.00001053665,0.0002574833,0.00032786268,0.00004555749],"category_scores_gemma":[0.00058860425,0.00015103431,0.00023040276,0.0005920934,0.0001418172,0.0000044612093,0.00017666479,0.000132019,0.000003534784],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036101283,0.000034032837,0.004427008,0.000015364523,0.000055785047,0.000007514002,0.000010895445,0.0002889805,0.98722607,0.00062560133,0.00022947753,0.0070431614],"study_design_scores_gemma":[0.00032935964,0.00007188069,0.0003862409,0.000018994413,0.000021310636,0.0000012143978,0.000027736287,0.0010243545,0.98679715,0.002477064,0.008671677,0.00017300498],"about_ca_topic_score_codex":0.000021203012,"about_ca_topic_score_gemma":0.0000052095434,"teacher_disagreement_score":0.08838005,"about_ca_system_score_codex":0.0000063994935,"about_ca_system_score_gemma":0.00004564051,"threshold_uncertainty_score":0.61590004},"labels":[],"label_agreement":null},{"id":"W4386438497","doi":"10.1007/978-1-0716-3393-9_17","title":"Engineering SH2 Domains with Tailored Specificities and Affinities","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Occupational Cancer Research Centre; University of Toronto","funders":"","keywords":"SH2 domain; Computational biology; Affinities; Protein–protein interaction; Signal transduction; Biology; Biochemistry; Proto-oncogene tyrosine-protein kinase Src; Chemistry; Cell biology","score_opus":0.04075022051449732,"score_gpt":0.4041251674382545,"score_spread":0.36337494692375716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386438497","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8235681,0.001365794,0.16864634,0.0017509408,0.00011180984,0.00027874552,0.0000106126445,0.00010443782,0.0041632494],"genre_scores_gemma":[0.070732154,0.00096489786,0.92531264,0.0003870789,0.00012785547,0.00006954082,0.00006173265,0.000043049215,0.0023010804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990326,0.00018218358,0.00014688699,0.00022816955,0.00008744195,0.00032271625],"domain_scores_gemma":[0.9994156,0.0003275855,0.000017735414,0.00013913111,0.000028038781,0.00007192376],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005218622,0.00012416007,0.0002813739,0.0003022587,0.000031258045,0.000009569104,0.00006470458,0.00008694806,0.00005112476],"category_scores_gemma":[0.00016823335,0.000090226466,0.00003657821,0.00032113158,0.00021247206,0.00001617655,0.000094141644,0.00021052628,0.000012480766],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005291842,0.000038326274,0.02215809,0.00024257367,0.00015876957,0.0012885059,0.0006535647,0.00011726569,0.88898623,0.06298235,0.00010806899,0.022737099],"study_design_scores_gemma":[0.0074492884,0.0046060593,0.11767788,0.0006876086,0.00017004486,0.0016271283,0.0045666504,0.01640637,0.5719268,0.039854445,0.23324147,0.0017862761],"about_ca_topic_score_codex":0.000048305385,"about_ca_topic_score_gemma":0.00000649039,"teacher_disagreement_score":0.7566663,"about_ca_system_score_codex":0.000015923615,"about_ca_system_score_gemma":0.00002966976,"threshold_uncertainty_score":0.36793283},"labels":[],"label_agreement":null},{"id":"W4386463014","doi":"10.1007/978-1-0716-3393-9","title":"SH2 Domains","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Cytokine Signaling Pathways and Interactions","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Universidade Estadual Paulista; Universität Leipzig; Universidad Nacional de San Martín; High Energy Accelerator Research Organization; University of Toronto; University of Illinois at Urbana-Champaign; University of Toronto Mississauga; Universidade Federal do Rio de Janeiro; Monash University; Universität des Saarlandes; Chinese University of Hong Kong; Monash Biomedicine Discovery Institute, Monash University; Università degli Studi di Roma Tor Vergata; European Molecular Biology Laboratory; Consejo Nacional de Investigaciones Científicas y Técnicas; Yale Cancer Center; Yale University; Moffitt Cancer Center; University of South Florida; University of Nebraska-Lincoln","keywords":"Function (biology); Computer science; Biology; Evolutionary biology","score_opus":0.051645455295626766,"score_gpt":0.4475981425313143,"score_spread":0.39595268723568755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386463014","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000051756982,0.0009065862,0.60858804,0.0004860444,0.0013437287,0.00043965864,0.00004991088,0.00015467074,0.3879796],"genre_scores_gemma":[0.000006579327,0.0001588877,0.5220281,0.0010175125,0.00033038374,0.00006353665,0.0004088072,0.00011009325,0.47587612],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981931,0.0004124166,0.00045600953,0.00051931775,0.0000920027,0.00032715034],"domain_scores_gemma":[0.99878156,0.0003943121,0.00013310793,0.0005331203,0.00007002124,0.000087868466],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0008286453,0.00028256682,0.0007497406,0.0005677771,0.00002934807,0.000007555725,0.00015086618,0.000689464,0.0003939253],"category_scores_gemma":[0.00066629384,0.00025551865,0.00033291278,0.00018904754,0.00013295091,0.000007584758,0.00012896684,0.0009392923,0.0002062216],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006578498,0.00006846302,0.00006714427,0.00012612199,0.00028148567,0.0008941512,0.000067848254,0.000008259016,0.93656915,0.02669988,0.013567277,0.021584455],"study_design_scores_gemma":[0.00072426535,0.0004722886,0.000043693744,0.00038609185,0.00018107922,0.00017110266,0.000012612418,0.00006726285,0.04873529,0.06900047,0.87986225,0.00034361644],"about_ca_topic_score_codex":0.000022873171,"about_ca_topic_score_gemma":0.000011911149,"teacher_disagreement_score":0.88783383,"about_ca_system_score_codex":0.00021536769,"about_ca_system_score_gemma":0.00033765618,"threshold_uncertainty_score":0.9999897},"labels":[],"label_agreement":null},{"id":"W4386494376","doi":"10.1007/978-1-0716-3381-6_7","title":"Isolation and Characterization of Single-Domain Antibodies from Immune Phage Display Libraries","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Natural Sciences and Engineering Research Council; University of Ottawa; National Research Council Canada","funders":"","keywords":"Paratope; Single-domain antibody; Antibody; Computational biology; Phage display; Complementarity determining region; Flow cytometry; Surface plasmon resonance; Antigen; Peptide library; Antibody-drug conjugate; Immunoglobulin light chain; Virology; Molecular biology; Biology; Chemistry; Immunology; Monoclonal antibody; Biochemistry; Nanotechnology; Peptide sequence; Materials science; Gene","score_opus":0.035111454563001715,"score_gpt":0.38725466685551996,"score_spread":0.3521432122925182,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386494376","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.82410103,0.00067958824,0.17391948,0.0007799475,0.00008158656,0.000144925,0.000040467028,0.000022236158,0.0002307481],"genre_scores_gemma":[0.41552463,0.0006819733,0.5818024,0.00020473306,0.00008110207,0.000019448828,0.0012473372,0.000026868558,0.0004115033],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987307,0.0005010811,0.00028380516,0.00021776556,0.000077025914,0.00018960501],"domain_scores_gemma":[0.99942243,0.0002898222,0.00007289273,0.00014320183,0.000032454856,0.00003922413],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047395303,0.00010545005,0.00033724666,0.00022328805,0.00003287967,0.000008779533,0.0000637436,0.000119812044,0.000042157368],"category_scores_gemma":[0.00020348026,0.00008574593,0.00005159486,0.00031506512,0.00023041008,0.00004294616,0.0001321251,0.000120316356,0.000004536849],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018570577,0.00003582148,0.048248988,0.00005285768,0.000043122232,0.000032365937,0.00030726244,4.1460615e-7,0.9341807,0.0031863505,0.0000022116947,0.01372424],"study_design_scores_gemma":[0.0004947577,0.00023196766,0.26448068,0.00006245045,0.000015872765,0.000007995853,0.000066927656,0.00081465446,0.72163725,0.01092037,0.001175133,0.000091926406],"about_ca_topic_score_codex":0.00008529572,"about_ca_topic_score_gemma":0.0000024649435,"teacher_disagreement_score":0.40857637,"about_ca_system_score_codex":0.000008468896,"about_ca_system_score_gemma":0.00002161676,"threshold_uncertainty_score":0.34966174},"labels":[],"label_agreement":null},{"id":"W4386494396","doi":"10.1007/978-1-0716-3381-6_26","title":"Applications of High-Throughput DNA Sequencing to Single-Domain Antibody Discovery and Engineering","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Natural Sciences and Engineering Research Council of Canada; National Research Council Canada","funders":"National Research Council Canada","keywords":"Panning (audio); Computational biology; Amplicon; Phage display; DNA sequencing; Biology; Single-domain antibody; DNA; Antibody; Genetics; Polymerase chain reaction; Gene","score_opus":0.03429509245631678,"score_gpt":0.42109758841541595,"score_spread":0.38680249595909916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386494396","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4630187,0.00019847797,0.5357109,0.000641515,0.0000343394,0.00022148732,0.000011632056,0.000019476622,0.0001435419],"genre_scores_gemma":[0.17401528,0.00010042549,0.82519424,0.00023879067,0.000059783208,0.000072257666,0.00007231114,0.00002197235,0.00022492101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988912,0.0001945532,0.00024845402,0.0002873176,0.00009001939,0.00028845813],"domain_scores_gemma":[0.99931633,0.00031967124,0.000031549283,0.00021343489,0.000035711673,0.000083316256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074134103,0.00011198118,0.0003416301,0.0003412318,0.000024252236,0.000006730286,0.00009260289,0.00009403122,0.00000750573],"category_scores_gemma":[0.00027587402,0.00009655906,0.00005092747,0.00068017206,0.00009884618,0.000020366328,0.00018780847,0.0001540074,0.000006279644],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037351605,0.000021639458,0.0026242388,0.000111505455,0.00003411362,0.00004477814,0.00010666928,0.000059599846,0.9737208,0.013186359,0.0000068475147,0.010046134],"study_design_scores_gemma":[0.00067640725,0.00060982845,0.014115643,0.00015540818,0.000030291929,0.00009419953,0.00019959564,0.0008036898,0.953072,0.01505642,0.014909122,0.00027740677],"about_ca_topic_score_codex":0.00018076645,"about_ca_topic_score_gemma":0.0000050888016,"teacher_disagreement_score":0.2894834,"about_ca_system_score_codex":0.000042109186,"about_ca_system_score_gemma":0.0000420835,"threshold_uncertainty_score":0.39375642},"labels":[],"label_agreement":null},{"id":"W4386494488","doi":"10.1007/978-1-0716-3381-6_4","title":"Construction of Synthetic Antibody Phage Display Libraries","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"Phage display; Computational biology; Antibody; Complementarity determining region; Peptide library; Recombinant DNA; Synthetic biology; Construct (python library); Computer science; Antigen; Biology; Monoclonal antibody; Immunology; Genetics; Peptide sequence; Gene","score_opus":0.035467043072096714,"score_gpt":0.45634354891266354,"score_spread":0.42087650584056685,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386494488","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7739991,0.0010439922,0.21580043,0.0023831662,0.00032053184,0.0003146304,0.000026155656,0.00006662877,0.0060453448],"genre_scores_gemma":[0.100954495,0.00060320395,0.8971023,0.00021215041,0.00006337353,0.000025537196,0.00015448272,0.000026306823,0.00085815816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985652,0.00056569243,0.000267049,0.00023278288,0.0000989573,0.00027035116],"domain_scores_gemma":[0.99932575,0.00031938875,0.00005032471,0.00020754128,0.000037310478,0.000059693877],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069276406,0.00010520729,0.00035418107,0.00031321347,0.000027042837,0.000004224155,0.00010369298,0.0001298943,0.00012573783],"category_scores_gemma":[0.0004172212,0.00008154942,0.00010020188,0.00055263663,0.00048208033,0.000018601138,0.00012136149,0.0001946137,0.000023916207],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013542175,0.000035432244,0.031555515,0.00010640711,0.0000463412,0.00012361638,0.000059049937,0.0000026928888,0.8750034,0.0672594,0.000019456806,0.025653258],"study_design_scores_gemma":[0.0008025822,0.00049034436,0.024997126,0.00011297937,0.000040510342,0.00019531419,0.00015873759,0.0017283519,0.9031808,0.06159965,0.006515127,0.00017850222],"about_ca_topic_score_codex":0.000046263125,"about_ca_topic_score_gemma":9.689911e-7,"teacher_disagreement_score":0.6813019,"about_ca_system_score_codex":0.00000969394,"about_ca_system_score_gemma":0.000058547448,"threshold_uncertainty_score":0.3325489},"labels":[],"label_agreement":null},{"id":"W4386500803","doi":"10.1007/978-1-0716-3441-7","title":"Computational Drug Discovery and Design","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":31,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional; Faculty of Pharmacy and Pharmaceutical Sciences, University of Alberta; Department of Biological Sciences, Purdue University; Perelman School of Medicine, University of Pennsylvania; School of Engineering and Applied Science, University of Pennsylvania; College of Engineering, Michigan State University; Sichuan University; Banaras Hindu University; Directorate for Biological Sciences; Baker Heart and Diabetes Institute; Purdue University; Centre National de la Recherche Scientifique; Consejo Nacional de Investigaciones Científicas y Técnicas; University of Alberta; Michigan State University; Institute for Translational Medicine and Therapeutics; University of Pennsylvania","keywords":"Identification (biology); Drug discovery; Computer science; Drug; Computational biology; Data science; Medicine; Bioinformatics; Biology; Pharmacology","score_opus":0.0416439590328613,"score_gpt":0.39367619128745596,"score_spread":0.3520322322545947,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386500803","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010888005,0.0011902865,0.98982114,0.0005000628,0.0008855632,0.00044757413,0.000021737253,0.00015940415,0.006963338],"genre_scores_gemma":[0.000004796532,0.00005860882,0.94378924,0.0005418748,0.00006885435,0.000062287465,0.00008810658,0.000058757858,0.055327497],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9931568,0.004300738,0.00061633415,0.0012280142,0.00025753843,0.00044055886],"domain_scores_gemma":[0.9927473,0.006218018,0.00025141807,0.00060353224,0.00008670037,0.000093004346],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0042577186,0.00044683754,0.00071370916,0.0007588978,0.00006902528,0.00017660884,0.001126399,0.00037248348,0.0000050144636],"category_scores_gemma":[0.0006331761,0.00045901307,0.00016009145,0.00045740395,0.00026881776,0.00019857918,0.0013326036,0.00062165305,0.000028566661],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001405538,0.000031856016,0.000018276085,0.000066481276,0.0001100512,0.00020763735,0.00021395698,0.11936332,0.0007255551,0.80516994,0.002087986,0.07199089],"study_design_scores_gemma":[0.00025107563,0.000049240716,0.00008305962,0.000062689876,0.000013674051,0.00003332285,0.0000027873846,0.15061411,0.00028642314,0.8439442,0.0042442163,0.00041519213],"about_ca_topic_score_codex":0.000010959828,"about_ca_topic_score_gemma":0.0000026504456,"teacher_disagreement_score":0.0715757,"about_ca_system_score_codex":0.00019993601,"about_ca_system_score_gemma":0.000779304,"threshold_uncertainty_score":0.99978614},"labels":[],"label_agreement":null},{"id":"W4386503875","doi":"10.1007/978-1-0716-3441-7_7","title":"Applications of Molecular Dynamics Simulations in Drug Discovery","year":2023,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":70,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Druggability; Molecular dynamics; Drug discovery; Computational biology; Computer science; Nanotechnology; Chemistry; Bioinformatics; Computational chemistry; Biology; Materials science; Biochemistry","score_opus":0.02024438539119464,"score_gpt":0.42310564899260966,"score_spread":0.402861263601415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386503875","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000049930914,0.48652452,0.5120504,0.000007846328,0.00008613288,0.0008587616,0.00024962417,0.000010776823,0.00016198518],"genre_scores_gemma":[0.000109809844,0.76766413,0.22806434,0.0000529221,0.000058658563,0.000596767,0.003063986,0.00013217791,0.0002571892],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9959474,0.0014632932,0.0011303396,0.0009015884,0.000103053906,0.00045430244],"domain_scores_gemma":[0.9981132,0.00020981474,0.00045666378,0.0010964095,0.00006399847,0.00005992793],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00083887565,0.00050216075,0.0014621696,0.00064456253,0.000028077677,0.000015983029,0.00073850766,0.0009665153,0.000003400482],"category_scores_gemma":[0.00041909498,0.000485555,0.0004891449,0.0011272028,0.00022777227,0.0000041093303,0.0005178949,0.0004999357,0.000003313869],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019202773,0.00013722006,0.00010970041,0.004628471,0.00034849034,0.00004529137,0.000029185741,0.0011927474,0.03305964,0.026464984,0.0000075383045,0.9339575],"study_design_scores_gemma":[0.0012656804,0.00028805967,0.0000145474605,0.0032506862,0.0007882258,0.00007033471,0.000070394715,0.0014629537,0.01262283,0.07777675,0.89977604,0.002613482],"about_ca_topic_score_codex":0.00010754969,"about_ca_topic_score_gemma":0.00039508656,"teacher_disagreement_score":0.93134403,"about_ca_system_score_codex":0.00013038663,"about_ca_system_score_gemma":0.00044739115,"threshold_uncertainty_score":0.9997596},"labels":[],"label_agreement":null},{"id":"W4386522992","doi":"10.1007/978-1-0716-3381-6","title":"Phage Display","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Research Council Canada; CSL Limited; Universiti Sains Malaysia; University of Waterloo; Memorial Sloan-Kettering Cancer Center; Tel Aviv University; Danmarks Tekniske Universitet; University of Ottawa; Ewha Womans University","keywords":"Phage display; Computer science; Computational biology; Antibody; Biology; Genetics","score_opus":0.03178473056774247,"score_gpt":0.412587288056316,"score_spread":0.38080255748857356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386522992","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041826954,0.004445553,0.7826795,0.00037425503,0.0021110512,0.0011154547,0.00029882512,0.000084321124,0.20847277],"genre_scores_gemma":[0.000052997617,0.0031389894,0.31163397,0.001002513,0.0006992046,0.00012941753,0.0030436292,0.00019584224,0.6801034],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963381,0.0007484748,0.0008055155,0.0009041845,0.00029138365,0.0009123392],"domain_scores_gemma":[0.9981979,0.00017385746,0.00022092911,0.0010310019,0.00012755807,0.00024876895],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002293443,0.0005374888,0.00070258667,0.00043600218,0.000059315098,0.00003292553,0.0009756021,0.0018726806,0.0000760375],"category_scores_gemma":[0.0015149812,0.0004894074,0.00035804004,0.0002130656,0.0006508219,0.0000016743796,0.0009770007,0.00077865756,0.00023734734],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011442825,0.00010828777,0.00017219175,0.00040547748,0.00038872552,0.00018657302,0.00007433852,0.00001668501,0.8352464,0.0036037506,0.039169297,0.12051387],"study_design_scores_gemma":[0.0008807326,0.0008011601,0.000079287754,0.00010625689,0.000052114672,0.000026626443,0.000026318512,0.00016596822,0.08209649,0.024276108,0.89059806,0.00089089834],"about_ca_topic_score_codex":0.000012110768,"about_ca_topic_score_gemma":0.000042315223,"teacher_disagreement_score":0.85142875,"about_ca_system_score_codex":0.00008776843,"about_ca_system_score_gemma":0.0005774847,"threshold_uncertainty_score":0.99975574},"labels":[],"label_agreement":null},{"id":"W4386531244","doi":"10.1007/978-1-0716-3354-0_20","title":"AGENT for Exploring and Analyzing Gene Regulatory Networks from Arabidopsis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Arabidopsis; Gene regulatory network; Centrality; Arabidopsis thaliana; Organism; Computational biology; Gene; Biology; Computer science; Genetics; Gene expression; Mathematics","score_opus":0.10894265836262462,"score_gpt":0.3754984780352271,"score_spread":0.2665558196726025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386531244","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.873008,0.0013431881,0.12467714,0.0003962414,0.00017338133,0.00026431598,0.000048047514,0.00006686689,0.000022820677],"genre_scores_gemma":[0.53351146,0.0018584987,0.46135637,0.0007654454,0.00040782933,0.00071908254,0.001280372,0.00001038253,0.000090574984],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99761754,0.00096801756,0.00024947603,0.00057742564,0.000059540158,0.0005280155],"domain_scores_gemma":[0.9986546,0.0010676298,0.000057385274,0.00011123307,0.000030756226,0.000078411635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016956407,0.00016149734,0.0003065113,0.00007015921,0.00010755761,0.00002131155,0.0002664913,0.00024212443,0.00001845275],"category_scores_gemma":[0.00040610097,0.00007919047,0.00009907774,0.0005490063,0.00012183792,0.00002575491,0.00025458387,0.00018284538,0.000004699411],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025009995,0.000008204534,0.0099004395,0.0000018261195,0.000027480273,0.000022831475,0.000014286899,0.00006604368,0.824776,0.00018198488,0.000023869487,0.16495202],"study_design_scores_gemma":[0.00078183296,0.00053279125,0.29964995,0.000055990444,0.00005372185,0.000021802405,0.00020017805,0.017139733,0.6512668,0.019392041,0.010050917,0.00085422926],"about_ca_topic_score_codex":0.00011537896,"about_ca_topic_score_gemma":0.00007461812,"teacher_disagreement_score":0.33949655,"about_ca_system_score_codex":0.000022803713,"about_ca_system_score_gemma":0.0000057800257,"threshold_uncertainty_score":0.32292935},"labels":[],"label_agreement":null},{"id":"W4386549073","doi":"10.1007/978-1-0716-3354-0","title":"Plant Gene Regulatory Networks","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Agricultural Research Service; Directorate for Biological Sciences; Nanjing University; College of Engineering, Michigan State University; Technische Universität München; Universiteit Gent; Centre National de la Recherche Scientifique; State Key Laboratory of Pharmaceutical Biotechnology; Universität Heidelberg; Broad Institute; York University; Michigan State University; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; U.S. Department of Agriculture","keywords":"Gene regulatory network; Gene; Computational biology; Computer science; Biology; Genetics; Gene expression","score_opus":0.021315287251621014,"score_gpt":0.3324395232980196,"score_spread":0.3111242360463986,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4386549073","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0003224507,0.027879208,0.94051725,0.00013415994,0.00217118,0.0006348077,0.00022684674,0.000087123495,0.028027002],"genre_scores_gemma":[0.00005853641,0.0032203507,0.19624576,0.0008832446,0.0019486382,0.00013913009,0.019081496,0.00022343463,0.77819943],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974327,0.0006726336,0.0004656354,0.00088299724,0.000092504124,0.0004535411],"domain_scores_gemma":[0.9988713,0.000051109102,0.0002036527,0.0007274361,0.000056392957,0.000090076224],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0008759142,0.00043926126,0.00054129766,0.00018180363,0.000058116337,0.000015213123,0.00041551312,0.0018917001,0.000015636466],"category_scores_gemma":[0.00014724382,0.0004034585,0.00021947405,0.00010562195,0.00017149889,0.0000012165826,0.00026104393,0.00045456007,0.000025090303],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003731606,0.000016421462,0.00001835396,0.000019473757,0.0001482325,0.0001206773,0.000011774074,0.0006179857,0.95360893,0.001985812,0.036137994,0.007277003],"study_design_scores_gemma":[0.00041672145,0.00022345282,0.000032804808,0.00007395653,0.000074491865,0.0001225704,0.0000036382085,0.00029757846,0.359168,0.0030890808,0.6357557,0.0007420029],"about_ca_topic_score_codex":0.000021958742,"about_ca_topic_score_gemma":0.00023536505,"teacher_disagreement_score":0.75017244,"about_ca_system_score_codex":0.000069879665,"about_ca_system_score_gemma":0.0003021414,"threshold_uncertainty_score":0.99984175},"labels":[],"label_agreement":null},{"id":"W4387563663","doi":"10.1007/978-1-0716-3481-3_5","title":"A FRET-Based Assay and Computational Tools to Quantify Enzymatic Rates and Explore the Mechanisms of RNA Deadenylases in Heterogeneous Environments","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"RNA; Computational biology; Chemistry; Biological system; Biology; Biochemistry; Gene","score_opus":0.05849694502590254,"score_gpt":0.4022242295599849,"score_spread":0.34372728453408236,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387563663","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55903876,0.00028996367,0.44029468,0.00017944016,0.000013959323,0.00016966766,0.0000079755255,0.000002294002,0.0000032464452],"genre_scores_gemma":[0.7842549,0.00006340583,0.21518515,0.0003258073,0.000006337642,0.00007800948,0.000056125693,0.000013781787,0.000016455668],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981063,0.0010208945,0.00023641982,0.00030893367,0.00008014472,0.00024731294],"domain_scores_gemma":[0.9993632,0.00033813188,0.00004762345,0.00018240395,0.000013071065,0.00005559013],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012875674,0.0001204132,0.00019808118,0.00014618905,0.000034460405,0.000014376691,0.00014272201,0.000116710515,0.0000035529188],"category_scores_gemma":[0.00059454987,0.00009497316,0.00003473085,0.0001754482,0.0001299737,0.000002098458,0.00018010518,0.0000906582,0.0000013453846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044767752,0.000019183844,0.00220909,0.000018153518,0.000020002013,0.000016662314,0.00004447335,0.0036832858,0.98726666,0.0003686496,0.000004348036,0.006304737],"study_design_scores_gemma":[0.0005001579,0.0003585526,0.004218784,0.00002374553,0.0000051647066,0.000010640717,0.00012337253,0.011543023,0.9766323,0.006384038,0.000077515244,0.00012273162],"about_ca_topic_score_codex":0.000027391172,"about_ca_topic_score_gemma":0.000021306858,"teacher_disagreement_score":0.22521615,"about_ca_system_score_codex":0.000009039096,"about_ca_system_score_gemma":0.000027292233,"threshold_uncertainty_score":0.38728932},"labels":[],"label_agreement":null},{"id":"W4387570192","doi":"10.1007/978-1-0716-3481-3","title":"Deadenylation","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Child Health and Human Development; Institute of Molecular and Cell Biology; Eunice Kennedy Shriver National Institute of Child Health and Human Development; Chinese Academy of Sciences; School of Medicine, Johns Hopkins University; University of North Carolina at Chapel Hill; Northeast Agricultural University; Nottingham Trent University; Centre National de la Recherche Scientifique; Universitas Muhammadiyah Surakarta; University of Chinese Academy of Sciences; Korea Advanced Institute of Science and Technology; Institute of Genetics and Developmental Biology, Chinese Academy of Sciences; Medical School, University of Michigan; Hospital for Sick Children; Northeast Forestry University; Institut National de la Santé et de la Recherche Médicale; University of Minnesota; Trent University; National Cancer Institute; Uniwersytet Warszawski; University of Toronto; Johns Hopkins University; National Institutes of Health; Ohio State University","keywords":"Translation (biology); Gene expression; Cell biology; Computational biology; Biology; Gene; Genetics; Messenger RNA","score_opus":0.058296550325777595,"score_gpt":0.3692875037932796,"score_spread":0.31099095346750205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387570192","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00010181402,0.042242445,0.78687966,0.00042765468,0.0027713375,0.00034770498,0.000072160845,0.00026676292,0.16689044],"genre_scores_gemma":[0.000014900584,0.00016855486,0.5702647,0.0002718418,0.00013584403,0.000070376926,0.00006114782,0.00007711487,0.42893556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973711,0.0012590649,0.0004033555,0.000528213,0.00009487239,0.00034342],"domain_scores_gemma":[0.9990012,0.00035066938,0.0001520432,0.00042621102,0.000029941095,0.00003990826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018150468,0.00025575125,0.0005040823,0.00024189429,0.00004965475,0.000030670988,0.0003868853,0.0006945882,0.00045102803],"category_scores_gemma":[0.00028033435,0.00021043181,0.00011212552,0.00009945002,0.00018371461,0.000019881632,0.0001809105,0.0002751546,0.00048774685],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012968031,0.0000073819406,0.000009832039,0.000047624955,0.0000139333815,0.00002287366,0.00005536206,0.0000015818031,0.8903532,0.0110557955,0.0010000436,0.097419396],"study_design_scores_gemma":[0.000082810846,0.000052135147,0.00000583231,0.00007916731,0.00002400799,0.0000050157014,0.000005596769,0.000051208634,0.82248574,0.08195346,0.09494643,0.00030858023],"about_ca_topic_score_codex":0.00006453408,"about_ca_topic_score_gemma":0.00002173961,"teacher_disagreement_score":0.26204512,"about_ca_system_score_codex":0.00008263766,"about_ca_system_score_gemma":0.0001562682,"threshold_uncertainty_score":0.85811603},"labels":[],"label_agreement":null},{"id":"W4387764959","doi":"10.1007/978-1-0716-3507-0_11","title":"Proximity Mapping of Ciliary Proteins by BioID","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Princess Margaret Cancer Centre; University Health Network; Toronto Metropolitan University","funders":"","keywords":"Cilium; Ciliopathies; Cell biology; Biology; Organelle; Intraflagellar transport; Function (biology); Computational biology; Genetics; Gene; Mutant; Phenotype","score_opus":0.02101488745174054,"score_gpt":0.35743589852707625,"score_spread":0.33642101107533573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387764959","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.45546228,0.0074009527,0.53210497,0.0008752375,0.00044908852,0.00082233077,0.00006238015,0.00007390638,0.0027488586],"genre_scores_gemma":[0.15111631,0.0018166978,0.8445807,0.00055393967,0.00010031359,0.00020139934,0.00029883356,0.00007022241,0.0012615804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981211,0.00068484776,0.00033934697,0.000440491,0.000060925882,0.00035333002],"domain_scores_gemma":[0.9994246,0.000036191926,0.000105045525,0.00033911093,0.000052761043,0.000042306594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010681605,0.0001771123,0.00029097873,0.00014910837,0.000044740384,0.0000033290826,0.00023645318,0.00045101045,0.0000074722166],"category_scores_gemma":[0.00042551185,0.0001548427,0.000116354764,0.0004926014,0.00026714863,0.0000010220419,0.00030212844,0.00019583406,0.0000063629773],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002211321,0.000047770704,0.0028502017,0.00004064594,0.00008442827,0.0000058571773,0.00004903147,0.000010464402,0.98774034,0.0002577063,0.0006140937,0.008277353],"study_design_scores_gemma":[0.00040370488,0.00019922138,0.00068974367,0.00001975799,0.0000084280355,0.0000051748666,0.000098944736,0.00007735939,0.98026216,0.0014116087,0.016635552,0.00018831457],"about_ca_topic_score_codex":0.000027069656,"about_ca_topic_score_gemma":0.0000044296767,"teacher_disagreement_score":0.3124757,"about_ca_system_score_codex":0.000009902456,"about_ca_system_score_gemma":0.000038907547,"threshold_uncertainty_score":0.63143015},"labels":[],"label_agreement":null},{"id":"W4387765407","doi":"10.1007/978-1-0716-3507-0_13","title":"Primary Human Nasal Epithelial Cell Culture","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children","funders":"","keywords":"Cilium; Respiratory tract; Primary (astronomy); Airway; Cell culture; Cell biology; Biology; Respiratory system; Medicine; Immunology; Pathology; Anatomy; Surgery; Genetics","score_opus":0.02919157755627723,"score_gpt":0.458314600516311,"score_spread":0.4291230229600338,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387765407","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35538405,0.0027213725,0.6185255,0.0012257302,0.00059173384,0.0011345661,0.000048347323,0.000369488,0.01999919],"genre_scores_gemma":[0.010604274,0.00010808137,0.9861924,0.0006042493,0.00012741188,0.00007734245,0.00019388467,0.00003727337,0.0020550704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99785584,0.0008355782,0.00026767456,0.00040621386,0.00015004702,0.0004846565],"domain_scores_gemma":[0.999213,0.00021231266,0.000045719113,0.000362251,0.000054569737,0.000112152615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011897293,0.00015305454,0.0003843462,0.00028159723,0.000047945727,0.000007892933,0.00018843386,0.00020157897,0.00008165646],"category_scores_gemma":[0.0007798242,0.0001237628,0.00010656062,0.0006095085,0.00021067509,0.000018183806,0.00019703677,0.00041663717,0.000086928514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007635313,0.000053337317,0.001827175,0.00008636611,0.000016932545,0.00024051985,0.00009236479,0.000007933023,0.98483926,0.0006885282,0.00032332275,0.011747935],"study_design_scores_gemma":[0.0020638232,0.0009375796,0.010732228,0.000052647556,0.000024469346,0.000042871627,0.000092847215,0.00013726173,0.90692854,0.016231103,0.062519275,0.00023738334],"about_ca_topic_score_codex":0.000023677345,"about_ca_topic_score_gemma":0.0000036354236,"teacher_disagreement_score":0.3676669,"about_ca_system_score_codex":0.00007739632,"about_ca_system_score_gemma":0.000071928975,"threshold_uncertainty_score":0.50469005},"labels":[],"label_agreement":null},{"id":"W4387793440","doi":"10.1007/978-1-0716-3507-0","title":"Cilia","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Great Ormond Street Institute of Child Health; Medical Research Council; College of Medicine and Life Sciences, University of Toledo; Université de Recherche Paris Sciences et Lettres; Directorate for Biological Sciences; University of Leicester; National Institutes of Health; Syddansk Universitet; Hospital for Sick Children; Centre National de la Recherche Scientifique; Koç Üniversitesi; Alder Hey Children's NHS Foundation Trust; Institut National de la Santé et de la Recherche Médicale; National Cancer Institute; University College London; Saint Louis University","keywords":"Cilium; Computational biology; Biology; Cell biology","score_opus":0.027842052956739617,"score_gpt":0.37021630977356046,"score_spread":0.3423742568168208,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4387793440","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00046455392,0.0057560396,0.67980933,0.00018885164,0.0021546113,0.00100253,0.00037258284,0.00010178456,0.31014973],"genre_scores_gemma":[0.00003425919,0.0006015444,0.26343912,0.0009770032,0.00038927284,0.000072024864,0.0019247321,0.00013034057,0.7324317],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99746364,0.0007606267,0.0003467636,0.0008699709,0.00009074484,0.00046827324],"domain_scores_gemma":[0.9988692,0.0000686086,0.00014987095,0.00075900153,0.00006401286,0.000089314686],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001031612,0.00038529685,0.0004972212,0.00023259458,0.00004896626,0.000012205588,0.0006560484,0.001461404,0.00006826529],"category_scores_gemma":[0.00038470715,0.00042456822,0.00028026215,0.00013273148,0.00025094592,8.476251e-7,0.00068057206,0.00048384088,0.00016045792],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011838023,0.000056237885,0.0012825179,0.00013505653,0.0003910458,0.00026362028,0.000038578717,0.00003631442,0.93048155,0.014316206,0.031947266,0.020933209],"study_design_scores_gemma":[0.0007352699,0.0004880497,0.00029143653,0.00006748029,0.00007674999,0.000029955281,0.000009390883,0.000013577197,0.10340172,0.10910397,0.7847765,0.0010059],"about_ca_topic_score_codex":0.000013672652,"about_ca_topic_score_gemma":0.00003086213,"teacher_disagreement_score":0.82707983,"about_ca_system_score_codex":0.00006164669,"about_ca_system_score_gemma":0.00030219465,"threshold_uncertainty_score":0.9998349},"labels":[],"label_agreement":null},{"id":"W4388536256","doi":"10.1007/978-1-0716-3503-2_3","title":"Ice Isn’t the Only Crystal in Town: Structure Determination of Ice-Binding Proteins via X-Ray Crystallography","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Structural biology; Crystallography; Chemistry; Biophysics; Nanotechnology; Computational biology; Biology; Materials science; Biochemistry","score_opus":0.009775854401128178,"score_gpt":0.32740112334997507,"score_spread":0.3176252689488469,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388536256","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33665752,0.00057106663,0.6617689,0.00010267019,0.00017095466,0.00051868183,0.00003861242,0.000018378438,0.00015317994],"genre_scores_gemma":[0.674461,0.0000859963,0.32481593,0.00014378538,0.00006828573,0.00007470383,0.00025952855,0.00003312072,0.000057619218],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99745494,0.0010384845,0.0004419121,0.00052977336,0.00011388015,0.00042102378],"domain_scores_gemma":[0.99912703,0.00013786565,0.00014856843,0.00048817907,0.000058378762,0.000039947994],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011097549,0.00024598787,0.00030449597,0.00038285097,0.000055490367,0.000017265716,0.00044926995,0.000494467,0.000017930026],"category_scores_gemma":[0.00042594614,0.00019519123,0.00015023068,0.0008792949,0.00023682772,0.0000071019613,0.00022217921,0.00030764818,4.0913295e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004865807,0.000015391173,0.0020664893,0.00004090103,0.000028459583,0.000021520606,0.00010553413,0.00031961812,0.95571464,0.0005403013,0.0000054882557,0.041093007],"study_design_scores_gemma":[0.0010979532,0.000683778,0.007183393,0.00007712712,0.000038559574,0.000066085995,0.00019923062,0.0059441053,0.95797145,0.018795513,0.0072930274,0.0006497934],"about_ca_topic_score_codex":0.00006898411,"about_ca_topic_score_gemma":0.00021651982,"teacher_disagreement_score":0.3378035,"about_ca_system_score_codex":0.000027231123,"about_ca_system_score_gemma":0.00010376479,"threshold_uncertainty_score":0.7959667},"labels":[],"label_agreement":null},{"id":"W4388538139","doi":"10.1007/978-1-0716-3503-2_6","title":"Evaluation of Ice Recrystallization Inhibition of Ice-Binding Proteins by Monitoring Specific Ice Crystals","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Physiological and biochemical adaptations","field":"Environmental Science","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Recrystallization (geology); Ice crystals; Materials science; Polymer; Biophysics; Chemistry; Geology; Biology; Meteorology; Composite material; Petrology; Physics","score_opus":0.08298051789157067,"score_gpt":0.38652908127937213,"score_spread":0.30354856338780145,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388538139","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7602261,0.000086568994,0.2387764,0.0000481043,0.000052709955,0.0003182472,0.000014428494,0.000018666758,0.00045880978],"genre_scores_gemma":[0.85197926,0.00005935814,0.14775091,0.000009776137,0.000014443977,0.00007326199,0.00008695196,0.00000724405,0.000018805558],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977342,0.0011505806,0.0003651834,0.00030356503,0.0002598123,0.00018669802],"domain_scores_gemma":[0.9993378,0.00024531677,0.00018262288,0.00015288961,0.00004880008,0.000032567783],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024529127,0.00010151455,0.00018866184,0.00007448829,0.000035684378,0.0000037648224,0.00012208532,0.00014301302,0.00013889604],"category_scores_gemma":[0.0009575336,0.00008899626,0.000052321968,0.0008342922,0.00016082714,0.000052491276,0.00013372267,0.00009872322,0.000011161313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009907812,0.000059936923,0.0007619159,0.000010201446,0.0000063560124,4.9240975e-7,0.00006734899,0.0024510138,0.9820214,0.00011705135,0.000014726821,0.014479649],"study_design_scores_gemma":[0.00021092816,0.00008645253,0.0021865547,0.000030199491,0.000014537836,2.505179e-7,0.000073641975,0.0021790653,0.9768473,0.01810037,0.00017561053,0.000095080875],"about_ca_topic_score_codex":0.00005847104,"about_ca_topic_score_gemma":0.0000019642946,"teacher_disagreement_score":0.09175318,"about_ca_system_score_codex":0.00010946657,"about_ca_system_score_gemma":0.000009872284,"threshold_uncertainty_score":0.3629162},"labels":[],"label_agreement":null},{"id":"W4388538470","doi":"10.1007/978-1-0716-3503-2_16","title":"Analysis of Ice-Binding Protein Evolution","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Phylogenetic tree; Biology; Computational biology; Genetics; Gene","score_opus":0.024567941965418415,"score_gpt":0.3705801682112017,"score_spread":0.3460122262457833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388538470","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7680941,0.0005453827,0.23076,0.00004015687,0.000078226556,0.00014934545,0.000020625104,0.0000047643966,0.00030738726],"genre_scores_gemma":[0.84163463,0.00007996683,0.1578694,0.00002808149,0.000024752144,0.00006314889,0.000097293,0.00001570326,0.00018702818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99853516,0.0004824511,0.00029563584,0.00036958055,0.000049973794,0.00026717692],"domain_scores_gemma":[0.99942833,0.00004645005,0.000105485335,0.0003353234,0.00005406944,0.000030349776],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010002636,0.000128852,0.00031449803,0.0004583989,0.000031986317,0.000003376506,0.00018834506,0.00018071187,0.0000068169047],"category_scores_gemma":[0.0003844155,0.00012741482,0.00017934006,0.0011709324,0.000105028295,2.9120142e-7,0.0002053361,0.00006660236,0.0000030867886],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018742827,0.000017094926,0.020933032,0.000008359119,0.0004369052,0.0000021544963,0.000028305345,0.00089382427,0.9738852,0.0012821623,0.0000064358264,0.002487818],"study_design_scores_gemma":[0.00030604578,0.00020598732,0.017608324,0.0000063688376,0.00017199837,8.5397414e-7,0.00010141359,0.00097370474,0.97632444,0.0023526957,0.0017368133,0.00021133413],"about_ca_topic_score_codex":0.000042449818,"about_ca_topic_score_gemma":0.000033280285,"teacher_disagreement_score":0.073540494,"about_ca_system_score_codex":0.000016147938,"about_ca_system_score_gemma":0.000032856176,"threshold_uncertainty_score":0.51958257},"labels":[],"label_agreement":null},{"id":"W4388698891","doi":"10.1007/978-1-0716-3549-0_11","title":"Flow Virometry: A Fluorescence-Based Approach to Enumerate Bacteriophages in Liquid Samples","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University College of the North","funders":"","keywords":"Enumeration; Flow cytometry; Fluorescence; Colloid; Human immunodeficiency virus (HIV); Virus; Flow (mathematics); Virology; Biology; Biological system; Computational biology; Chemistry; Mathematics; Physics; Molecular biology; Optics","score_opus":0.02870916125886524,"score_gpt":0.35482955187580945,"score_spread":0.3261203906169442,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388698891","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4689206,0.000024329744,0.5291699,0.00032298765,0.00023860137,0.0003115413,0.000027092705,0.000057593006,0.0009273479],"genre_scores_gemma":[0.12628019,0.00001643055,0.87270194,0.0006451987,0.000018079574,0.00013915944,0.00006513359,0.000025476693,0.000108408625],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977157,0.00086024875,0.0003100835,0.0005641045,0.000060746865,0.00048908975],"domain_scores_gemma":[0.99938333,0.00014316832,0.0000489315,0.00032758262,0.0000056079007,0.00009137127],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094169885,0.00019223981,0.00029422433,0.0003501293,0.00004792315,0.000025834317,0.00033439542,0.0001580135,0.00047245156],"category_scores_gemma":[0.00025505913,0.00018405529,0.0000788913,0.0015068519,0.00012685318,0.000053138505,0.0002904458,0.00023864793,0.0002698053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051918745,0.00007917388,0.001110371,0.0000063570897,0.0000051437783,0.000021825841,0.00016023808,0.00279659,0.971355,0.00004005951,0.000053440315,0.024319882],"study_design_scores_gemma":[0.0008222521,0.0004604116,0.13047144,0.000047986912,0.000013015815,0.000018014678,0.000119143166,0.01233503,0.83154726,0.0005380951,0.022954274,0.00067310577],"about_ca_topic_score_codex":0.0006687547,"about_ca_topic_score_gemma":0.00010138227,"teacher_disagreement_score":0.343532,"about_ca_system_score_codex":0.00013453518,"about_ca_system_score_gemma":0.00001281322,"threshold_uncertainty_score":0.7505557},"labels":[],"label_agreement":null},{"id":"W4388861783","doi":"10.1007/978-1-0716-3485-1_10","title":"Monitoring the Intracellular Trafficking of Virus-Induced Structures and Intercellular Spread of Viral Infection in Plants Using Endomembrane Trafficking Pathway-Specific Chemical Inhibitor and Organelle-Selective Fluorescence Dye","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Endomembrane system; Cell biology; Biology; Endosome; Golgi apparatus; Endoplasmic reticulum; Plasmodesma; Viral replication; Endocytic cycle; Endocytosis; Intracellular; Virology; Biochemistry; Virus; Cell; Cytoplasm","score_opus":0.05381205080688258,"score_gpt":0.33782466945466477,"score_spread":0.2840126186477822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388861783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99756,0.001154182,0.00082155917,0.000023823295,0.000108752756,0.00028315306,0.000022581762,0.000021750004,0.000004155798],"genre_scores_gemma":[0.9939957,0.0009785468,0.0049370346,0.0000033198319,0.00005820436,0.000011110834,0.000012534962,0.0000030695373,4.257947e-7],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99777424,0.0009413218,0.00039820198,0.0003911279,0.00013615891,0.00035896662],"domain_scores_gemma":[0.9987363,0.0009827508,0.00013428545,0.00006761032,0.000039197414,0.000039847153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011971911,0.00018652543,0.00041777059,0.00012638423,0.0000786109,0.000017059869,0.0001733637,0.00019152346,0.0000031475063],"category_scores_gemma":[0.0004540036,0.00008904718,0.000048515038,0.0006300784,0.0002897774,0.000044571378,0.00023771485,0.00036886314,1.6218706e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008551633,0.000024688958,0.005887688,0.000024307228,0.000020630314,0.000023052116,0.0007608281,0.00007965934,0.9330272,0.00003448982,2.3661715e-7,0.060031686],"study_design_scores_gemma":[0.0002396869,0.00014230833,0.012741856,0.000100126126,0.0000052097616,0.000016394606,0.0004458384,0.001423949,0.98428935,0.0004517169,0.000014621741,0.00012894165],"about_ca_topic_score_codex":0.00050627853,"about_ca_topic_score_gemma":0.000067464265,"teacher_disagreement_score":0.059902743,"about_ca_system_score_codex":0.00004107339,"about_ca_system_score_gemma":0.000011120558,"threshold_uncertainty_score":0.36312386},"labels":[],"label_agreement":null},{"id":"W4388998052","doi":"10.1007/978-1-0716-3499-8_6","title":"Transition and Post-Transition Radiometals for PET Imaging and Radiotherapy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Radiopharmaceutical Chemistry and Applications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Simon Fraser University; TRIUMF","funders":"","keywords":"Chemistry; Radiochemistry; Nanotechnology; Materials science","score_opus":0.028671492982392834,"score_gpt":0.44989151230283025,"score_spread":0.4212200193204374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998052","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24611712,0.0015751313,0.7440183,0.0078383675,0.000021958702,0.0003273946,0.000019378007,0.00003867164,0.000043691594],"genre_scores_gemma":[0.15290882,0.0007392223,0.8429687,0.0028569952,0.00007335456,0.00019878405,0.00019922074,0.000023135279,0.000031783333],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928623,0.00014284256,0.00014439622,0.00024101307,0.00002615271,0.00015934552],"domain_scores_gemma":[0.99960965,0.00018873255,0.000018459485,0.0000946522,0.000024245906,0.00006424499],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060872827,0.00008589598,0.00019887454,0.00011063797,0.000038011338,0.000006281227,0.00002549433,0.00005542809,0.0000106349735],"category_scores_gemma":[0.00007557654,0.000080947946,0.000043355536,0.0002154432,0.0001259053,0.000017007938,0.0000052814808,0.00009397354,3.6581986e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000076582444,0.000017332,0.00006548291,0.00008116499,0.000022993456,0.000018411738,0.00014050734,0.0000068452573,0.9627422,0.0006778867,0.000009353642,0.0361412],"study_design_scores_gemma":[0.0040325774,0.00023692992,0.0022144374,0.000046503254,0.00016375486,0.0008270974,0.0002574237,0.041585088,0.92937756,0.013638108,0.007350279,0.00027021766],"about_ca_topic_score_codex":0.000004066355,"about_ca_topic_score_gemma":1.1502594e-7,"teacher_disagreement_score":0.09895039,"about_ca_system_score_codex":0.00001441786,"about_ca_system_score_gemma":0.000011267131,"threshold_uncertainty_score":0.33009616},"labels":[],"label_agreement":null},{"id":"W4388998067","doi":"10.1007/978-1-0716-3499-8","title":"Positron Emission Tomography","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Medical Imaging Techniques and Applications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Positron emission tomography; Positron emission; Tomography; Positron; Medical physics; Brain positron emission tomography; Nuclear medicine; Preclinical imaging; Physics; Medicine; Nuclear physics; Optics; Electron","score_opus":0.03339332188141029,"score_gpt":0.45626561792014725,"score_spread":0.42287229603873694,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998067","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000026970702,0.0008928884,0.8802607,0.003079421,0.00018005405,0.0006901898,0.00001415812,0.00033855278,0.11451704],"genre_scores_gemma":[0.000003050619,0.00022725936,0.7700142,0.0011399892,0.000095817384,0.00013228979,0.00035857953,0.00006140934,0.22796735],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9984234,0.000300996,0.00037720165,0.00050376327,0.00010873914,0.00028587462],"domain_scores_gemma":[0.99889094,0.00020718212,0.0001084332,0.00060388923,0.000047598995,0.00014198825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009481694,0.00023195946,0.0005784799,0.00044996306,0.000024720379,0.000004981311,0.00020489757,0.00072048965,0.00008418993],"category_scores_gemma":[0.0003414294,0.00019677733,0.00023109879,0.00027076056,0.00019051845,0.000004405959,0.00016001103,0.0008180872,0.000026327583],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003113787,0.00008980612,0.00028336167,0.00023021924,0.000109864915,0.00025176152,0.000022270926,1.762324e-7,0.8138805,0.022800094,0.09229653,0.070004255],"study_design_scores_gemma":[0.0004057331,0.00024097513,0.00006661772,0.0005790734,0.0001634418,0.000058139864,0.0000025517406,0.00016183584,0.04222771,0.2073909,0.7483882,0.0003148734],"about_ca_topic_score_codex":0.00001093194,"about_ca_topic_score_gemma":4.318543e-7,"teacher_disagreement_score":0.7716528,"about_ca_system_score_codex":0.00008857636,"about_ca_system_score_gemma":0.00016964744,"threshold_uncertainty_score":0.8024347},"labels":[],"label_agreement":null},{"id":"W4388998071","doi":"10.1007/978-1-0716-3499-8_11","title":"Small Animal Multisubject PET/CT Workflow","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Medical Imaging Techniques and Applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Positron emission tomography; Pet imaging; Molecular imaging; PET-CT; Nuclear medicine; Preclinical imaging; Medicine; In vivo; Biology","score_opus":0.07204259561186903,"score_gpt":0.46488861252147795,"score_spread":0.3928460169096089,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998071","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16180995,0.00013518799,0.8300688,0.005667447,0.00008535634,0.00040221473,0.0000035653416,0.00038163317,0.0014458217],"genre_scores_gemma":[0.0340247,0.00008235553,0.96417785,0.0011609751,0.00004149061,0.00016821535,0.000047327736,0.0000235852,0.00027352024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986674,0.00037116127,0.00024318563,0.00033931478,0.00005773424,0.00032117832],"domain_scores_gemma":[0.99923205,0.00022426553,0.00003897966,0.00037473754,0.000027733959,0.00010223839],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011569422,0.00011994729,0.00028599103,0.00020123001,0.000028667919,0.0000051468373,0.00014876381,0.000032852673,0.00007948858],"category_scores_gemma":[0.0008179104,0.0001026297,0.00009144709,0.0006374348,0.00013711807,0.000005937272,0.00011661508,0.0003134176,0.00005132806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020897949,0.00006180677,0.0047727227,0.000023776576,0.000019040664,0.0010979242,0.0000134413785,0.0000014640763,0.9310269,0.004255497,0.0007119044,0.057994634],"study_design_scores_gemma":[0.0024506687,0.0007449171,0.012285755,0.00023312739,0.00013042605,0.0019437595,0.00007246374,0.029206587,0.7469055,0.04622143,0.15912825,0.00067712006],"about_ca_topic_score_codex":0.000051152827,"about_ca_topic_score_gemma":0.000002914365,"teacher_disagreement_score":0.1841214,"about_ca_system_score_codex":0.000028288052,"about_ca_system_score_gemma":0.00003944227,"threshold_uncertainty_score":0.41851178},"labels":[],"label_agreement":null},{"id":"W4388998074","doi":"10.1007/978-1-0716-3499-8_1","title":"11C-Fixation Techniques","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemical Reactions and Isotopes","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Centre for Addiction and Mental Health","funders":"","keywords":"Carboxylation; Chemistry; Fixation (population genetics); Combinatorial chemistry; Radiochemistry; Organic chemistry; Catalysis; Biochemistry","score_opus":0.15312684913745636,"score_gpt":0.5845776825743682,"score_spread":0.4314508334369118,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998074","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25523648,0.000651711,0.6991512,0.0031305961,0.0015709247,0.000734997,0.000025827067,0.00081948936,0.03867876],"genre_scores_gemma":[0.11024082,0.0009944695,0.8818355,0.0042719566,0.00024572958,0.0004776244,0.00016257352,0.00005410109,0.0017172085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812686,0.0010277136,0.00024079469,0.00026119372,0.000034340268,0.0003091145],"domain_scores_gemma":[0.99914867,0.0005394015,0.00005617999,0.00016046695,0.000032794993,0.000062464176],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015322518,0.00011679066,0.00018806609,0.00022851722,0.000054054388,0.0000053490303,0.00016504765,0.00040463722,0.0003486905],"category_scores_gemma":[0.00063852867,0.00010852644,0.00006998372,0.00057406473,0.0001258793,0.000023320312,0.00009601162,0.0004917783,0.0001043767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000186435,0.00003573524,0.0015999121,0.0000059770505,0.000016489003,0.000016175847,0.000037879883,0.000011935746,0.8181312,0.0060815606,0.00049118465,0.1735533],"study_design_scores_gemma":[0.00016614156,0.000036483892,0.00028756028,0.0000030145723,0.000010261273,0.000005574536,0.000017674876,0.0005583376,0.67524654,0.017840926,0.305734,0.0000934563],"about_ca_topic_score_codex":0.000022295504,"about_ca_topic_score_gemma":0.0000035159549,"teacher_disagreement_score":0.30524284,"about_ca_system_score_codex":0.00004407282,"about_ca_system_score_gemma":0.000023148625,"threshold_uncertainty_score":0.44255796},"labels":[],"label_agreement":null},{"id":"W4388998096","doi":"10.1007/978-1-0716-3499-8_16","title":"Brain PET Imaging in Small Animals: Tracer Formulation, Data Acquisition, Image Reconstruction, and Data Analysis","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Medical Imaging Techniques and Applications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Concordia University; Montreal Neurological Institute and Hospital; University of Toronto; McGill University Health Centre; Sunnybrook Health Science Centre; Douglas Mental Health University Institute; McGill University","funders":"","keywords":"Positron emission tomography; Pet imaging; Preclinical imaging; PET-CT; Nuclear medicine; Functional imaging; Medicine; Neuroscience; In vivo; Radiology; Psychology; Biology","score_opus":0.08391299715249417,"score_gpt":0.4849343808727676,"score_spread":0.4010213837202734,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998096","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05060491,0.00025984232,0.93209094,0.01630698,0.00003135806,0.0003288576,0.00011227456,0.00012147645,0.00014335178],"genre_scores_gemma":[0.018791039,0.00016518166,0.97764564,0.00095824734,0.000035818797,0.000043521006,0.0023152616,0.000018044493,0.000027224414],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9978576,0.0005343765,0.00048062607,0.0007937914,0.000063690226,0.00026992318],"domain_scores_gemma":[0.99785435,0.00036081922,0.00009577797,0.0015413881,0.00006163743,0.00008599567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004095916,0.0001346816,0.00037949035,0.00068153103,0.000044892826,0.0000218886,0.00042223546,0.000078953024,0.00008243442],"category_scores_gemma":[0.0016630271,0.00012699362,0.00003634442,0.0016569855,0.00017954998,0.000091681155,0.00060418935,0.0002366536,0.0000037401371],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035600413,0.000078198806,0.14364107,0.0000629075,0.00014610265,0.00014506976,0.00009717345,0.000006136447,0.7082129,0.0041409256,0.0023913463,0.14104256],"study_design_scores_gemma":[0.0021195044,0.000076955606,0.13306287,0.00014512835,0.000738826,0.00061579625,0.00034443746,0.7601266,0.010308309,0.07640006,0.01547823,0.0005833072],"about_ca_topic_score_codex":0.00018517877,"about_ca_topic_score_gemma":0.00006862905,"teacher_disagreement_score":0.76012045,"about_ca_system_score_codex":0.000029064684,"about_ca_system_score_gemma":0.00004951711,"threshold_uncertainty_score":0.51786494},"labels":[],"label_agreement":null},{"id":"W4388998108","doi":"10.1007/978-1-0716-3499-8_23","title":"Quantitation of Oncologic Image Features for Radiomic Analyses in PET","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Radiomics and Machine Learning in Medical Imaging","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Radiomics; Positron emission tomography; Voxel; Artificial intelligence; Computer science; Medical imaging; Field (mathematics); Computer vision; Medical physics; Nuclear medicine; Pattern recognition (psychology); Medicine; Mathematics","score_opus":0.06431353896398899,"score_gpt":0.5417673059431451,"score_spread":0.47745376697915615,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998108","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33577296,0.00058263406,0.661278,0.001544024,0.00015922994,0.00030077237,0.000003337645,0.000028661492,0.00033033127],"genre_scores_gemma":[0.09354392,0.000111308065,0.9057545,0.00037069595,0.000026213795,0.000045698456,0.00007339578,0.000015302245,0.000058975653],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985198,0.00064229214,0.00031733591,0.00024011021,0.000055156863,0.00022532507],"domain_scores_gemma":[0.9989013,0.00077504193,0.00009150541,0.0001572517,0.000039040977,0.000035857312],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0020335373,0.000094980904,0.00044088202,0.0005743741,0.0000141956325,0.0000036413203,0.00009779029,0.00009304184,0.00001061835],"category_scores_gemma":[0.0046722856,0.00007818399,0.000107996806,0.00058841496,0.00013563278,0.000012850475,0.00003502221,0.00024284727,0.0000016207914],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000086296044,0.00004136952,0.005409846,0.00008016615,0.00003050377,0.0001029148,0.00010787496,0.00031064454,0.96981937,0.0020757413,0.00012509622,0.021810155],"study_design_scores_gemma":[0.010913902,0.0023238596,0.20749591,0.00035758063,0.00031078124,0.00027053876,0.0011302648,0.17052455,0.5199016,0.08184507,0.0042928313,0.00063314295],"about_ca_topic_score_codex":0.000102157006,"about_ca_topic_score_gemma":0.000008285193,"teacher_disagreement_score":0.44991782,"about_ca_system_score_codex":0.000041648767,"about_ca_system_score_gemma":0.000053090847,"threshold_uncertainty_score":0.55934995},"labels":[],"label_agreement":null},{"id":"W4388998142","doi":"10.1007/978-1-0716-3499-8_3","title":"Silicon–Fluoride Acceptors (SiFA) for 18F-Radiolabeling: From Bench to Bedside","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Radiopharmaceutical Chemistry and Applications","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Context (archaeology); Chemistry; Positron emission tomography; Toolbox; Fluorine; Fluoride; Nanotechnology; Combinatorial chemistry; Radiochemistry; Computer science; Organic chemistry; Materials science; Nuclear medicine; Medicine; Inorganic chemistry; Archaeology","score_opus":0.07308153765312536,"score_gpt":0.5053637512984542,"score_spread":0.43228221364532887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998142","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.48080808,0.00037305517,0.512392,0.0047750818,0.00020085681,0.0007079071,0.00005478354,0.00012422203,0.0005640525],"genre_scores_gemma":[0.06450056,0.000055016983,0.93066645,0.003175104,0.0002750809,0.0006583017,0.00031493552,0.000040900435,0.00031363397],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984909,0.00017437771,0.00034153552,0.0005197966,0.00006631706,0.0004070615],"domain_scores_gemma":[0.9984708,0.00080904126,0.000041804276,0.00040911167,0.00004918959,0.00022008746],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000712685,0.00016788053,0.0003894201,0.00012998028,0.00005163259,0.000007898268,0.00020916345,0.00018330356,0.00010380746],"category_scores_gemma":[0.0015621191,0.00016025876,0.00012994476,0.0006221081,0.00007776645,0.000012050493,0.00008331906,0.000245224,0.000045332836],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007012245,0.00003899471,0.002098355,0.000021710392,0.000052551513,0.000018770688,0.000053589178,0.000060110116,0.9747237,0.0011116537,0.00047082588,0.021279644],"study_design_scores_gemma":[0.0008038806,0.00009368803,0.0010333249,0.000018653705,0.00006608868,0.000008073238,0.000045501354,0.0014651511,0.9242295,0.010070147,0.061999053,0.00016694101],"about_ca_topic_score_codex":0.000027750384,"about_ca_topic_score_gemma":0.0000014525172,"teacher_disagreement_score":0.4182745,"about_ca_system_score_codex":0.000059624195,"about_ca_system_score_gemma":0.000052337116,"threshold_uncertainty_score":0.65351623},"labels":[],"label_agreement":null},{"id":"W4388998163","doi":"10.1007/978-1-0716-3499-8_22","title":"Combined PET/MR: Where Anatomical Imaging Meets Cellular Function","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Medical Imaging Techniques and Applications","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Positron emission tomography; Magnetic resonance imaging; Pet imaging; Functional imaging; Computer science; Nuclear medicine; Computer vision; Biomedical engineering; Medicine; Radiology","score_opus":0.025575935615854303,"score_gpt":0.41476267289330404,"score_spread":0.38918673727744973,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4388998163","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06965017,0.00025912694,0.91353583,0.014719844,0.00016936727,0.00036229446,0.0000026593325,0.00040281354,0.00089790166],"genre_scores_gemma":[0.11795813,0.00010709616,0.8796342,0.0017060287,0.000059022495,0.00015357231,0.00011800451,0.000035406872,0.00022852408],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984405,0.0004482915,0.0003009442,0.00038969592,0.00009455735,0.0003259823],"domain_scores_gemma":[0.9992146,0.0001504693,0.00005323381,0.00041365784,0.000046978337,0.0001211002],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012362546,0.0001385449,0.0003130651,0.0002417661,0.000042667416,0.000007981263,0.00013632179,0.00009637415,0.00013238848],"category_scores_gemma":[0.0003598333,0.00012345714,0.000099244826,0.00057257956,0.00016421867,0.000014559669,0.00012053685,0.00034827623,0.000047059242],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038328748,0.0000564475,0.005273553,0.000029163744,0.000018310693,0.00017420154,0.00001242101,0.0000012312165,0.9639454,0.013026642,0.0023841963,0.015040099],"study_design_scores_gemma":[0.0037105277,0.0005316876,0.005033201,0.00022270312,0.00024856743,0.00016566977,0.00015411826,0.08637556,0.5631962,0.11441634,0.22524583,0.0006996306],"about_ca_topic_score_codex":0.000038791928,"about_ca_topic_score_gemma":0.0000012045747,"teacher_disagreement_score":0.40074924,"about_ca_system_score_codex":0.00004473867,"about_ca_system_score_gemma":0.00004072189,"threshold_uncertainty_score":0.5034436},"labels":[],"label_agreement":null},{"id":"W4389144842","doi":"10.1007/978-1-0716-3495-0_12","title":"Real-Time Assessment of Mitochondrial Function in Cytotrophoblast and Syncytialized Trophoblast Cells Using the Seahorse XFe24 Extracellular Flux Analyzer","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"","keywords":"Cell biology; Extracellular; Oxidative phosphorylation; Mitochondrion; Adenosine triphosphate; Biology; Glycolysis; Intracellular; Flux (metallurgy); Biochemistry; Chemistry; Metabolism","score_opus":0.01918882751303201,"score_gpt":0.35672418707651155,"score_spread":0.3375353595634795,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389144842","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5659198,0.00022268845,0.43248987,0.000043451244,0.0007053189,0.00040994483,0.000018910356,0.000016220338,0.00017378469],"genre_scores_gemma":[0.09719042,0.000863211,0.8989808,0.00022162244,0.0005748285,0.00018333556,0.00044363202,0.00012959306,0.0014125403],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9952937,0.002789746,0.0006462819,0.0007061968,0.00011732554,0.0004467671],"domain_scores_gemma":[0.99892455,0.00015119153,0.0002153151,0.0005593648,0.00007584507,0.00007375678],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013674641,0.00028548652,0.00051688665,0.00036097906,0.00006903065,0.000015888174,0.00023058578,0.00049085787,0.00010568969],"category_scores_gemma":[0.00023288088,0.0002372612,0.0001666826,0.00067024905,0.00029073312,0.0000047830677,0.0002329328,0.00027656957,0.0000068497666],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003483963,0.000053312255,0.000712395,0.000019024828,0.00005499551,0.00002911018,0.000049299033,0.0024495402,0.9952952,0.00026964696,0.000097299395,0.0006217804],"study_design_scores_gemma":[0.0024255458,0.00082132424,0.0012911764,0.000029106703,0.00007935866,0.000037396185,0.00016115743,0.013857008,0.97572124,0.0007699134,0.004415484,0.0003913103],"about_ca_topic_score_codex":0.00013978823,"about_ca_topic_score_gemma":0.000038957587,"teacher_disagreement_score":0.4687294,"about_ca_system_score_codex":0.000039304872,"about_ca_system_score_gemma":0.00012946111,"threshold_uncertainty_score":0.9675231},"labels":[],"label_agreement":null},{"id":"W4389144847","doi":"10.1007/978-1-0716-3495-0_2","title":"Isolation of Human Villous Cytotrophoblastic Cells from Term Placenta for Transfection","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"The Quebec Population Health Research Network; Université du Québec à Montréal","funders":"","keywords":"Transfection; Cell biology; Gene silencing; Placenta; Isolation (microbiology); Biology; Population; Function (biology); Cell culture; Gene; Genetics; Bioinformatics; Fetus; Medicine; Pregnancy","score_opus":0.0142245438762234,"score_gpt":0.3599595171067335,"score_spread":0.3457349732305101,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389144847","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4920359,0.00020190775,0.5072175,0.000018063916,0.00024480402,0.00017277278,0.000031478776,0.000010277638,0.000067290515],"genre_scores_gemma":[0.8683049,0.00030512747,0.13028744,0.00008985221,0.00011906827,0.00009344491,0.000646346,0.000037354253,0.00011645615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99880207,0.000317425,0.00027591916,0.00034814404,0.00003922858,0.00021724601],"domain_scores_gemma":[0.99961007,0.000049619244,0.00007996493,0.00019267543,0.000034751334,0.000032951466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031947606,0.00013128275,0.00021209667,0.00011725596,0.00003775085,0.0000037439324,0.00012688921,0.00032074458,0.000008545191],"category_scores_gemma":[0.000056431087,0.00012018137,0.00013720964,0.0001860155,0.000084759085,0.0000013919962,0.00003524496,0.00009187135,0.0000021900528],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013352247,0.000022420607,0.00035295723,0.000021809601,0.00006370202,0.0000021067826,0.000040355284,0.0009762282,0.99357915,0.000092641625,0.00003913957,0.004675966],"study_design_scores_gemma":[0.00083641044,0.0005858004,0.00043775907,0.000018320878,0.00002916593,0.0000015053828,0.000022608869,0.00074089563,0.99433154,0.0022303686,0.000628988,0.00013662993],"about_ca_topic_score_codex":0.00007206748,"about_ca_topic_score_gemma":0.000020680884,"teacher_disagreement_score":0.37693006,"about_ca_system_score_codex":0.000019513403,"about_ca_system_score_gemma":0.00002620098,"threshold_uncertainty_score":0.49008542},"labels":[],"label_agreement":null},{"id":"W4389144877","doi":"10.1007/978-1-0716-3495-0","title":"Trophoblasts","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pregnancy and preeclampsia studies","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre","funders":"Monash Biomedicine Discovery Institute, Monash University; Medizinische Universität Wien; Centre National de la Recherche Scientifique; University of Illinois at Urbana-Champaign; Monash University; Guangzhou Institute of Pediatrics, Guangzhou Women and Childrens Medical Center; Institut National de la Santé et de la Recherche Médicale; University of Auckland; Mount Sinai Health System; Universität Wien; Guangzhou Medical University; University of Missouri-Kansas City; University of Bern; Brown University; Lawson Health Research Institute; Children's Health Research Institute; McMaster University; Courtois Foundation; Georgetown University; Schulich School of Medicine and Dentistry; Lombardi Comprehensive Cancer Center, Georgetown University; Kaiser Permanente","keywords":"Angiogenesis; Trophoblast; Function (biology); Biology; Cell biology; Cancer research; Placenta; Pregnancy; Fetus","score_opus":0.043557201282341,"score_gpt":0.4148313107759029,"score_spread":0.3712741094935619,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389144877","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000023012133,0.018916845,0.3171014,0.0005621838,0.0011735379,0.00071074505,0.000030189136,0.0001991849,0.6612829],"genre_scores_gemma":[0.000005079718,0.0012727878,0.4496598,0.0007596461,0.00015795168,0.00010165062,0.00012490901,0.00008545772,0.5478327],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99792916,0.00064382685,0.0003950803,0.0005560326,0.00009070283,0.0003851827],"domain_scores_gemma":[0.9987749,0.00045561197,0.000112724,0.0005502181,0.000041740826,0.00006483119],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00080382754,0.0003250148,0.0009920716,0.0003625912,0.00002800539,0.000003499778,0.00017504334,0.000828877,0.00007495109],"category_scores_gemma":[0.0006219379,0.0002852917,0.0002606727,0.00016715529,0.00022659508,0.000005701595,0.00024434944,0.0007961937,0.00013943976],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092955364,0.00029748856,0.003220965,0.0031681352,0.003801108,0.010408694,0.0011082513,0.000016205962,0.29897234,0.12526779,0.06605025,0.48675922],"study_design_scores_gemma":[0.0018481367,0.0008001397,0.0007486858,0.0017070296,0.00039260008,0.00014291494,0.000017032089,0.00003041193,0.010223628,0.3640109,0.6193284,0.000750146],"about_ca_topic_score_codex":0.000006354419,"about_ca_topic_score_gemma":0.0000091891,"teacher_disagreement_score":0.55327815,"about_ca_system_score_codex":0.00012745113,"about_ca_system_score_gemma":0.00024137543,"threshold_uncertainty_score":0.99995995},"labels":[],"label_agreement":null},{"id":"W4389144897","doi":"10.1007/978-1-0716-3495-0_7","title":"Analyzing Trophoblast Fusion Using Immunofluorescence and Split Protein Complementation Assays","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Prenatal Screening and Diagnostics","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Lawson Health Research Institute; Western University","funders":"","keywords":"Syncytiotrophoblast; Cell fusion; Trophoblast; Cell biology; Fusion; Fusion protein; Syncytium; Immunofluorescence; Multinucleate; Biology; Chemistry; Cell; Recombinant DNA; Placenta; Immunology; Antibody; Fetus; Biochemistry; Genetics; Gene","score_opus":0.051214890400997144,"score_gpt":0.4312357914024973,"score_spread":0.38002090100150016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389144897","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44542712,0.0002646172,0.55387324,0.00010892377,0.000034257246,0.00019263463,0.0000037950422,0.000030771866,0.00006460756],"genre_scores_gemma":[0.17149517,0.000042684234,0.8282741,0.000072113675,0.000018691995,0.000016561129,0.00005935207,0.000011421204,0.000009917123],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998739,0.00050932466,0.00021874125,0.00024577862,0.000060245893,0.00022693472],"domain_scores_gemma":[0.99951696,0.00018584191,0.000057510828,0.00015764374,0.000031425694,0.000050610517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009386241,0.000098734665,0.00021582063,0.00021251624,0.000051519033,0.000009490296,0.000055644658,0.00009232149,0.000014648993],"category_scores_gemma":[0.0008722015,0.00009013746,0.000034132638,0.00042455058,0.00007968981,0.00001747367,0.00013513512,0.000154302,0.0000037237116],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005146504,0.000014034926,0.02050267,0.000028053008,0.000013808968,0.00006320952,0.000047099435,0.000032408392,0.9368747,0.0010457238,0.0000036156646,0.041323233],"study_design_scores_gemma":[0.0025919445,0.0007061742,0.101970404,0.0005184832,0.000101837584,0.00008328543,0.00028823706,0.06406736,0.81992716,0.008996872,0.00038096425,0.00036725486],"about_ca_topic_score_codex":0.0002569797,"about_ca_topic_score_gemma":0.000004860191,"teacher_disagreement_score":0.27440083,"about_ca_system_score_codex":0.000039313247,"about_ca_system_score_gemma":0.000024935809,"threshold_uncertainty_score":0.3675699},"labels":[],"label_agreement":null},{"id":"W4389225121","doi":"10.1007/978-1-0716-3589-6_12","title":"Assessment of Invadopodium Formation and Gelatin Degradation in Vitro","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cellular Mechanics and Interactions","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Invadopodia; Extracellular matrix; Cancer cell; Cell biology; In vitro; Podosome; Chemistry; Cell; Cancer; Biophysics; Biology; Biochemistry; Cytoskeleton; Genetics","score_opus":0.02510736306474759,"score_gpt":0.40018335409984473,"score_spread":0.37507599103509714,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389225121","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43442103,0.00013756733,0.5647258,0.00008199797,0.00009258801,0.00012958788,0.0000065326994,0.0000049557348,0.00039992467],"genre_scores_gemma":[0.6689524,0.00019428883,0.33031118,0.000078621706,0.000012957544,0.000039391918,0.00034772253,0.000010972612,0.000052431093],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988853,0.00042818737,0.00028237532,0.00021417707,0.00003932262,0.00015067554],"domain_scores_gemma":[0.99964744,0.000039822033,0.000087165114,0.00017276092,0.000030867737,0.00002195416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088304427,0.000086311426,0.0001484803,0.00022801333,0.000016667283,0.0000053219114,0.00007668052,0.00014305717,0.000006098503],"category_scores_gemma":[0.00018724315,0.000088582674,0.000039459683,0.00024715337,0.000031539854,0.0000042535758,0.00010840326,0.00010337541,8.6971e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001339372,0.000022235461,0.0012660148,0.000012645562,0.000007397671,0.0000020109912,0.000018806346,0.000042244475,0.9839541,0.0020916895,0.0000070906003,0.012562379],"study_design_scores_gemma":[0.00034477047,0.00011109608,0.003813353,0.000008357397,0.0000044852745,0.0000062977633,0.00007712827,0.0114896735,0.9797428,0.0024023666,0.0019083156,0.00009135156],"about_ca_topic_score_codex":0.00004712933,"about_ca_topic_score_gemma":0.00004020306,"teacher_disagreement_score":0.23453137,"about_ca_system_score_codex":0.000017887833,"about_ca_system_score_gemma":0.00002738746,"threshold_uncertainty_score":0.36122966},"labels":[],"label_agreement":null},{"id":"W4389236489","doi":"10.1007/978-1-0716-3589-6","title":"Proteases and Cancer","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Instytut Biologii Medycznej Polskiej Akademii Nauk; School of Medicine, Stanford University; University of Illinois at Urbana-Champaign; Institut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement; Indian Institute of Technology Bombay; Universidade de Macau; University College London; Queen Mary University of London; Imperial College London; Francis Crick Institute; University of East Anglia; Medical Research Council; Ministry of Education, India; University of Texas Health Science Center at Houston; Florida Atlantic University; Hotchkiss Brain Institute, University of Calgary; Faculty of Health and Medical Sciences, University of Western Australia; Universidad del Atlántico; Faculdade de Ciências da Saúde, Universidade de Macau; University of Surrey; University of Nevada, Reno; U.S. Department of Veterans Affairs","keywords":"Proteases; Protease; Recombinant DNA; Protein expression; Cancer; Computational biology; Biochemistry; Biology; Enzyme; Chemistry; Genetics; Gene","score_opus":0.024280389644313408,"score_gpt":0.3843953754429829,"score_spread":0.3601149857986695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389236489","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0024875319,0.11159687,0.78220767,0.0007369633,0.0034892226,0.00501109,0.00070594775,0.00025348278,0.09351122],"genre_scores_gemma":[0.0000867431,0.0076407325,0.37734938,0.00182141,0.0012196513,0.0016044701,0.0010384173,0.0003629542,0.6088762],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997725,0.00056977395,0.00034673364,0.00087126833,0.0000791348,0.00040808896],"domain_scores_gemma":[0.9991524,0.00004113753,0.00015552425,0.0004993518,0.000054894896,0.00009666038],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00072183035,0.00038923958,0.00047607944,0.00019294892,0.00004135773,0.000014994467,0.00026615604,0.0010664094,0.000032793425],"category_scores_gemma":[0.00031731234,0.0003801984,0.00014148513,0.0000865434,0.00018326414,0.0000013742867,0.00044586067,0.00036355192,0.000012522494],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003535021,0.000015218571,0.000032529544,0.00007715762,0.00009307462,0.000039481503,0.00000856619,0.0000030452952,0.97189206,0.002963317,0.0030363004,0.02180392],"study_design_scores_gemma":[0.00037464523,0.0003145858,0.0000048192705,0.00012706371,0.000043227148,0.000015660624,0.0000041401277,0.000015275304,0.6811981,0.054532945,0.26287806,0.0004914436],"about_ca_topic_score_codex":0.00003465541,"about_ca_topic_score_gemma":0.000027141466,"teacher_disagreement_score":0.515365,"about_ca_system_score_codex":0.000043291777,"about_ca_system_score_gemma":0.00032770867,"threshold_uncertainty_score":0.999865},"labels":[],"label_agreement":null},{"id":"W4389244303","doi":"10.1007/978-1-0716-3589-6_2","title":"N-Terminomics/TAILS of Human Tumor Biopsies and Cancer Cell Lines","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Bone and Joint Health Institute; University of Calgary","funders":"","keywords":"Proteome; Proteases; Proteolysis; Proteomics; Protease; Stable isotope labeling by amino acids in cell culture; Computational biology; Chemistry; Biology; Biochemistry; Tandem mass spectrometry; Mass spectrometry; Enzyme; Gene; Chromatography","score_opus":0.033630758746491005,"score_gpt":0.4346797115414499,"score_spread":0.4010489527949589,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389244303","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8535759,0.0007519052,0.14433582,0.0000594762,0.000017642125,0.00009833191,0.000036907146,0.000068643494,0.0010553605],"genre_scores_gemma":[0.08745169,0.0005273413,0.9114047,0.00005928756,0.000026081245,0.00025591633,0.000024752153,0.000021567614,0.00022864381],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99933237,0.000051249506,0.00021827091,0.00022702375,0.000017755676,0.00015333913],"domain_scores_gemma":[0.9995544,0.00007743612,0.00009752326,0.00022542752,0.0000222602,0.000022951543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021264238,0.00009473941,0.00019699789,0.00005333116,0.000028642557,0.0000034705597,0.00014175006,0.00009843577,0.000043125845],"category_scores_gemma":[0.00003703831,0.00009293025,0.000035353645,0.000120439545,0.00013071668,0.000011189106,0.00013338104,0.00009690214,6.7123227e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000030105712,0.000011418643,0.0016206985,0.0000537249,0.000004481148,0.0000037692764,0.000043515647,0.000010537471,0.9894087,0.0026483806,0.0000063330276,0.0061854473],"study_design_scores_gemma":[0.00011552553,0.000014135565,0.000041721607,0.000013548414,0.0000059522804,0.0000023191951,0.000055196237,0.00020789714,0.9699681,0.028526919,0.00095424853,0.00009442701],"about_ca_topic_score_codex":0.00010695214,"about_ca_topic_score_gemma":0.000009346005,"teacher_disagreement_score":0.7670689,"about_ca_system_score_codex":0.000018328918,"about_ca_system_score_gemma":0.000012499376,"threshold_uncertainty_score":0.37895855},"labels":[],"label_agreement":null},{"id":"W4389444017","doi":"10.1007/978-1-0716-3515-5","title":"Viral Metagenomics","year":2023,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Genetics; Directorate for Biological Sciences; Università degli Studi di Udine; Hokkaido University; Università di Bologna; Centre National de la Recherche Scientifique; Universita degli Studi di Bari Aldo Moro; Institut Universitaire de France; Università degli Studi di Milano-Bicocca; Citrus Research International; Università degli Studi di Pavia; Inha University; Shanghai Ocean University; Universiteit Stellenbosch; Muséum National d'Histoire Naturelle; Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria","keywords":"Metagenomics; Biology; Computational biology; Genetics; Gene","score_opus":0.022950476844137677,"score_gpt":0.3726465347280073,"score_spread":0.3496960578838696,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389444017","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00041427722,0.0002584506,0.4844076,0.00017636915,0.0019249462,0.00041479245,0.00008102415,0.0000980141,0.5122245],"genre_scores_gemma":[0.000005190617,0.00008639817,0.42740145,0.0004600351,0.00005013951,0.00002497898,0.00010131702,0.000056201778,0.5718143],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983767,0.0004442889,0.0003200429,0.00050281815,0.00004064241,0.00031547793],"domain_scores_gemma":[0.9993144,0.00012920039,0.00012490338,0.0003783082,0.0000039476845,0.000049241175],"candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0005983515,0.00024001292,0.00038562852,0.0001127175,0.000035461137,0.000014788057,0.00035866548,0.00046856207,0.002226071],"category_scores_gemma":[0.00008226209,0.00023765652,0.00018633586,0.000100949845,0.00021106671,0.00002338241,0.0005350586,0.0005117062,0.0015588425],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00000556969,0.000013997536,0.000011227939,0.0000059103645,0.000038230883,0.00006229756,0.000033647822,0.000044510678,0.96692985,0.0012781569,0.0038405017,0.027736112],"study_design_scores_gemma":[0.00013945285,0.00006822058,0.00021937506,0.000017022014,0.00004870724,0.00002075363,0.0000040814148,0.00004272795,0.015895536,0.04103022,0.9421366,0.0003773009],"about_ca_topic_score_codex":0.00013293672,"about_ca_topic_score_gemma":0.00011355995,"teacher_disagreement_score":0.9510343,"about_ca_system_score_codex":0.00035501624,"about_ca_system_score_gemma":0.000029345654,"threshold_uncertainty_score":0.9992186},"labels":[],"label_agreement":null},{"id":"W4389475013","doi":"10.1007/978-1-0716-3523-0_3","title":"Bacteriophage Taxonomy: A Continually Evolving Discipline","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":18,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Biotechnology and Biological Sciences Research Council; Medical Research Council","keywords":"Taxonomy (biology); Virus classification; Biology; Prokaryote; Bacteriophage; Genome; Evolutionary biology; Phylogenetics; Genetics; Zoology; Gene","score_opus":0.024905167463098593,"score_gpt":0.3709233343481169,"score_spread":0.3460181668850183,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389475013","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39549938,0.000054648244,0.5944167,0.0005561665,0.00060430856,0.0003589029,0.000017199527,0.00011929121,0.00837344],"genre_scores_gemma":[0.13174158,0.00002436615,0.8650179,0.00051628833,0.000045035264,0.00016351778,0.000048017555,0.000030888423,0.0024124137],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99855137,0.00042809272,0.00025686462,0.00036728848,0.000034041073,0.000362356],"domain_scores_gemma":[0.9994914,0.00011911383,0.00006733076,0.00025971868,0.0000058074556,0.00005664821],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00069946056,0.00013664257,0.00020871841,0.0000952153,0.0000606046,0.000023962823,0.00023476004,0.00011012624,0.0024617456],"category_scores_gemma":[0.00017836978,0.00012670214,0.00008201483,0.00046200055,0.00014519277,0.00007520551,0.00046185128,0.00018438183,0.0005239947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000059863123,0.000020998388,0.0023187976,0.0000021864892,0.0000072939056,0.000036112484,0.00008279643,0.000034626693,0.97064376,0.000078562894,0.00024327227,0.026525628],"study_design_scores_gemma":[0.0011178515,0.00025507322,0.33125645,0.000047248566,0.00003432774,0.000070000824,0.00024871694,0.0029164103,0.36175418,0.004119904,0.29730573,0.00087410107],"about_ca_topic_score_codex":0.00019750198,"about_ca_topic_score_gemma":0.0001373086,"teacher_disagreement_score":0.6088896,"about_ca_system_score_codex":0.00008556938,"about_ca_system_score_gemma":0.000007920225,"threshold_uncertainty_score":0.99845016},"labels":[],"label_agreement":null},{"id":"W4389485760","doi":"10.1007/978-1-0716-3533-9_7","title":"Reverse Genetics System for Rift Valley Fever Virus","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Vectors","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Rift Valley fever; Virology; Reverse genetics; Biology; Virus; Infectious disease (medical specialty); Disease; Genome; Genetics; Gene; Medicine","score_opus":0.05933903399648179,"score_gpt":0.45136786658466105,"score_spread":0.3920288325881793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389485760","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08744353,0.00033548273,0.9095676,0.0003088076,0.0008139073,0.00055396406,0.00001447782,0.00013973805,0.00082247047],"genre_scores_gemma":[0.040448513,0.00011056526,0.95762974,0.00063989824,0.00014185143,0.00019478897,0.000059085807,0.00004637884,0.0007291629],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99875796,0.0004185512,0.00024226915,0.00026854876,0.00004049684,0.00027220172],"domain_scores_gemma":[0.9994205,0.00014479228,0.000045861336,0.00027753442,0.00005275621,0.000058504498],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001017702,0.00011585328,0.00030136356,0.00024240545,0.00004225294,0.000004479381,0.00006755578,0.00021185188,0.00002186719],"category_scores_gemma":[0.00034471517,0.00009963119,0.00013541609,0.00042698305,0.000053968124,0.000007466557,0.00005324839,0.00013600614,0.000036338948],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004366691,0.00003691215,0.0035804326,0.00011471106,0.00007377119,0.00006049267,0.000049359784,0.0000952603,0.981114,0.0032385145,0.00078106014,0.01081187],"study_design_scores_gemma":[0.0035654302,0.0012620634,0.006934898,0.00013977691,0.00026037812,0.00016696002,0.00031084768,0.010306982,0.677734,0.0039253053,0.29488105,0.00051229494],"about_ca_topic_score_codex":0.000082211205,"about_ca_topic_score_gemma":0.000011301323,"teacher_disagreement_score":0.30337995,"about_ca_system_score_codex":0.000060912917,"about_ca_system_score_gemma":0.00003737397,"threshold_uncertainty_score":0.40628418},"labels":[],"label_agreement":null},{"id":"W4389507960","doi":"10.1007/978-1-0716-3593-3_4","title":"Expansion and Retroviral Transduction of Primary Murine T Cells for CAR T-Cell Therapy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Transduction (biophysics); Chimeric antigen receptor; Antigen; Biology; T cell; Transgene; Cell biology; Viral vector; Molecular biology; Immune system; Immunology; Genetics; Gene; Biochemistry","score_opus":0.04990881097312872,"score_gpt":0.41780008132419694,"score_spread":0.3678912703510682,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389507960","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8236408,0.001187169,0.17354219,0.0002630857,0.00016806285,0.0007906317,0.000008612374,0.00003097973,0.0003684724],"genre_scores_gemma":[0.10481833,0.0046207756,0.88700676,0.0004646832,0.00014717692,0.00020343419,0.00015501631,0.00009075507,0.0024930649],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849474,0.000587407,0.00025510378,0.000313513,0.00008915707,0.0002600533],"domain_scores_gemma":[0.99932474,0.00025982189,0.000046198544,0.00026132772,0.000057786037,0.000050126815],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016093382,0.00011703694,0.0003948917,0.0003086938,0.000019228091,0.0000025151978,0.00007226357,0.00018426182,0.00008173595],"category_scores_gemma":[0.000072177,0.00010074185,0.00010657849,0.000357822,0.00014548365,0.000012425218,0.00003168045,0.0001752866,0.0000010907194],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006617906,0.000056207344,0.00054035615,0.000121884455,0.000023665436,0.000010908127,0.00020256428,0.000006507679,0.8532277,0.000042277425,0.000026114689,0.14508007],"study_design_scores_gemma":[0.0027181555,0.0013586013,0.0009794232,0.000014518103,0.000013939809,0.000008980957,0.00005102867,0.00025494085,0.98758966,0.001593204,0.0053336727,0.00008384844],"about_ca_topic_score_codex":0.00004024192,"about_ca_topic_score_gemma":0.0000012422387,"teacher_disagreement_score":0.7188225,"about_ca_system_score_codex":0.00003970457,"about_ca_system_score_gemma":0.000055113964,"threshold_uncertainty_score":0.41081333},"labels":[],"label_agreement":null},{"id":"W4389508010","doi":"10.1007/978-1-0716-3593-3_17","title":"Nano-optogenetic CAR-T Cell Immunotherapy","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Chimeric antigen receptor; Optogenetics; Immunotherapy; Cancer immunotherapy; Cytokine release syndrome; Cell; Cancer research; Medicine; Immunology; Chemistry; Biology; Immune system; Neuroscience; Biochemistry","score_opus":0.04397838864026288,"score_gpt":0.44872381175964215,"score_spread":0.4047454231193793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389508010","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7152524,0.00522267,0.26144516,0.0012533095,0.000618111,0.0011635455,0.000008679148,0.00023227383,0.014803843],"genre_scores_gemma":[0.041735943,0.002452568,0.93370986,0.0021926279,0.00017976793,0.0002926919,0.00010219196,0.00017976307,0.019154591],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99709326,0.0013799747,0.00031697497,0.00046188134,0.00015006732,0.0005978433],"domain_scores_gemma":[0.9988249,0.0003120972,0.00004462932,0.0006637677,0.000056816174,0.00009776708],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.001894964,0.00019020186,0.00044362526,0.0004921232,0.00003535287,0.000009243933,0.0002392995,0.00027481382,0.0014473209],"category_scores_gemma":[0.00019058316,0.00017120672,0.00017551066,0.0009877251,0.00017358657,0.000008382188,0.00011880208,0.00035402973,0.00015034087],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014853886,0.000050959145,0.0035403604,0.000025275398,0.000047075864,0.00013554364,0.00016501421,0.000014944604,0.8928667,0.0001522978,0.000070978094,0.10278235],"study_design_scores_gemma":[0.0017360079,0.00045758157,0.0019530678,0.000013564867,0.000012527286,0.000036140525,0.000048899532,0.000228036,0.93458843,0.0036791037,0.05707613,0.00017049338],"about_ca_topic_score_codex":0.000086698354,"about_ca_topic_score_gemma":0.0000040877094,"teacher_disagreement_score":0.67351645,"about_ca_system_score_codex":0.000088330984,"about_ca_system_score_gemma":0.00011138623,"threshold_uncertainty_score":0.99946547},"labels":[],"label_agreement":null},{"id":"W4389508889","doi":"10.1007/978-1-0716-3585-8_12","title":"Measurement of Murine Neuromuscular Function Using the In Situ Preparation","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle activation and electromyography studies","field":"Engineering","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Aurora College","funders":"","keywords":"In situ; Function (biology); Biomedical engineering; Neuroscience; Medicine; Chemistry; Biology; Cell biology","score_opus":0.046267947963767105,"score_gpt":0.35433415881370617,"score_spread":0.30806621084993907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4389508889","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32055816,0.00048064918,0.6783069,0.00004103758,0.00015511441,0.00014589487,2.2054601e-7,0.000046040775,0.0002659709],"genre_scores_gemma":[0.9765929,0.00007029807,0.02324367,0.00003278547,0.000011236583,0.000035130102,0.000002538239,0.000010268017,0.0000011884142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99906415,0.0004041833,0.00020045039,0.00011590145,0.00006910467,0.00014623388],"domain_scores_gemma":[0.9997491,0.00004310637,0.000026998403,0.00014338891,0.000029148325,0.000008241993],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010354121,0.00007540671,0.0001333047,0.00024640822,0.000017921959,0.0000027483034,0.000061894025,0.000051266,0.0000023408606],"category_scores_gemma":[0.00012410403,0.00006219569,0.000044254404,0.00076978485,0.000027007307,0.000017662576,0.000023352173,0.00009741545,2.5500856e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008814402,0.0000076057586,0.0008197487,0.000018503122,0.00003147897,0.0000010620786,0.000087166,0.019884761,0.9671145,0.00038503137,0.000007845387,0.011633477],"study_design_scores_gemma":[0.00057093956,0.00015757211,0.101638675,0.00003793526,0.000035291003,0.000002336229,0.00014680115,0.044948798,0.84476703,0.005695757,0.001783243,0.00021559444],"about_ca_topic_score_codex":0.00002402575,"about_ca_topic_score_gemma":0.00003963077,"teacher_disagreement_score":0.6560347,"about_ca_system_score_codex":0.00002991315,"about_ca_system_score_gemma":0.0000066488633,"threshold_uncertainty_score":0.25362667},"labels":[],"label_agreement":null},{"id":"W4390106912","doi":"10.1007/978-1-0716-3609-1_4","title":"Salivary Organotypic Tissue Culture: An Ex-vivo 3D Model for Studying Radiation-Induced Injury of Human Salivary Glands","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Ex vivo; Immunostaining; Pathology; In vivo; Salivary gland; Organ culture; Cell biology; Biology; Regenerative medicine; In vitro; Immunohistochemistry; Stem cell; Medicine; Biochemistry","score_opus":0.11209133623432488,"score_gpt":0.5067439158477732,"score_spread":0.39465257961344835,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390106912","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5145385,0.00033927415,0.48279133,0.00014420897,0.00016021417,0.0012408704,0.000026397922,0.00008873201,0.000670466],"genre_scores_gemma":[0.46282658,0.000070786664,0.53541315,0.00022633575,0.00013300942,0.00018656133,0.00029463053,0.000080185215,0.00076876045],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99670213,0.001330393,0.00059746584,0.00059088646,0.00023180604,0.00054733525],"domain_scores_gemma":[0.9985512,0.00034383617,0.00013771947,0.0006332181,0.00016905482,0.00016496061],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0030704734,0.00023674227,0.0006823647,0.0005451289,0.00008554313,0.000009883848,0.0003180006,0.00040918263,0.00008616072],"category_scores_gemma":[0.0010446158,0.00020855787,0.00010109846,0.00088507036,0.0001020509,0.000042587646,0.0001922677,0.00035382374,0.0000086662785],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017219792,0.00014447817,0.004352353,0.0001686458,0.00007703152,0.00003282401,0.0008475374,0.00006911248,0.9703023,0.0012419934,0.000115246396,0.022476278],"study_design_scores_gemma":[0.0019622722,0.0024349196,0.0018710283,0.000057808695,0.00007747818,0.00001177973,0.00019576788,0.02567578,0.95883006,0.008149391,0.00044276018,0.00029092733],"about_ca_topic_score_codex":0.00009601593,"about_ca_topic_score_gemma":0.0000117480295,"teacher_disagreement_score":0.052621823,"about_ca_system_score_codex":0.00009268975,"about_ca_system_score_gemma":0.0001669263,"threshold_uncertainty_score":0.8504743},"labels":[],"label_agreement":null},{"id":"W4390106977","doi":"10.1007/978-1-0716-3609-1_9","title":"In Vitro Porcine (Explant) Colon Culture","year":2023,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Organ culture; Explant culture; In vivo; Ex vivo; Biology; In vitro; Cell culture; Cell biology; Population; Tissue culture; Cell; Computational biology; Medicine; Biotechnology; Genetics","score_opus":0.03126419316918983,"score_gpt":0.43807414181668625,"score_spread":0.4068099486474964,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390106977","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6299238,0.00984223,0.33370107,0.0111291595,0.0024865598,0.0018504577,0.00009370982,0.0002685029,0.010704486],"genre_scores_gemma":[0.039746787,0.0011430958,0.95138913,0.0048625674,0.00015775696,0.0001369817,0.00024820832,0.000042502845,0.00227294],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998579,0.00046024536,0.00025388136,0.00031687744,0.000060817434,0.00032916377],"domain_scores_gemma":[0.9995488,0.00008456292,0.000042256714,0.0002369305,0.00002359239,0.0000638452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009929799,0.00012907051,0.00042672743,0.00031031112,0.000013195895,0.0000031423056,0.0000810408,0.0001831955,0.00008141176],"category_scores_gemma":[0.00027411312,0.00010598144,0.000081802056,0.000778996,0.000054478354,0.000011856617,0.00006493697,0.0002701695,0.000027739214],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023095077,0.00004099702,0.0010519843,0.000034162098,0.000020439116,0.0006526378,0.00017239647,0.000008867774,0.9755893,0.000331056,0.00073625805,0.021130951],"study_design_scores_gemma":[0.0017274576,0.0002015702,0.0008804193,0.000027633345,0.000028671293,0.00007466435,0.00008944374,0.00011953662,0.8671655,0.0020876594,0.12746653,0.00013091977],"about_ca_topic_score_codex":0.00014033612,"about_ca_topic_score_gemma":0.000022814049,"teacher_disagreement_score":0.61768806,"about_ca_system_score_codex":0.000065708926,"about_ca_system_score_gemma":0.000049761402,"threshold_uncertainty_score":0.43217978},"labels":[],"label_agreement":null},{"id":"W4390500355","doi":"10.1007/978-1-0716-3561-2_4","title":"Constructing an ELISA for Detection of Anti-Borrelia in Wildlife and Agricultural Animals","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Prince Edward Island; Mount Allison University","funders":"","keywords":"Serology; Borrelia; Zoonosis; Biology; Pathogen; Wildlife; LYME; Lyme disease; Immunology; Veterinary medicine; Antibody; Borrelia burgdorferi; Medicine; Ecology","score_opus":0.015689018169749363,"score_gpt":0.35479099297266825,"score_spread":0.33910197480291887,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390500355","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86930865,0.0065649664,0.12303987,0.000047455436,0.0006058831,0.00029621867,0.000034351913,0.00004921805,0.000053389747],"genre_scores_gemma":[0.952638,0.000047838326,0.04712538,0.000054802393,0.000019105086,0.000056905872,0.00003778219,0.000013802997,0.000006437501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99792767,0.0010591272,0.00035029722,0.00038932194,0.000011058804,0.00026253378],"domain_scores_gemma":[0.99927413,0.00046501882,0.00007238894,0.00012768402,0.000044010343,0.000016740065],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075425167,0.0001516257,0.00035298467,0.0002601709,0.00003231518,0.000010724736,0.0000883113,0.0003072222,0.000017492464],"category_scores_gemma":[0.00061226805,0.00012899975,0.00007166756,0.00025896102,0.0002464672,0.000045384673,0.000052051997,0.00020740826,0.000002062621],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038475493,0.00003292956,0.028948847,0.000051799478,0.00006278085,0.0000049064097,0.00009502484,0.000008002864,0.937203,0.0044936575,0.000004718255,0.029055852],"study_design_scores_gemma":[0.00078291114,0.00046925232,0.046341866,0.00006150995,0.000054082433,0.00018803574,0.000452646,0.00012150904,0.9470282,0.0037457014,0.00054013316,0.00021413362],"about_ca_topic_score_codex":0.00015177905,"about_ca_topic_score_gemma":0.00013560218,"teacher_disagreement_score":0.083329305,"about_ca_system_score_codex":0.0000454823,"about_ca_system_score_gemma":0.000034398126,"threshold_uncertainty_score":0.5260457},"labels":[],"label_agreement":null},{"id":"W4390843528","doi":"10.1007/978-1-0716-3565-0_10","title":"New Perspectives on Crosstalks Between Bacterial Regulatory RNAs from Outer Membrane Vesicles and Eukaryotic Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Infections and Vaccines","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Vesicle; Cell biology; Biology; Bacterial outer membrane; RNA; Microvesicles; Extracellular vesicle; Gene; microRNA; Membrane; Biochemistry","score_opus":0.017584769276088985,"score_gpt":0.3338923761361295,"score_spread":0.3163076068600405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4390843528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9032586,0.005797392,0.08752271,0.00028216498,0.0026180164,0.00017664813,0.000076761935,0.000093313814,0.00017437174],"genre_scores_gemma":[0.800704,0.00046070962,0.19614218,0.00013964639,0.0010457761,0.000032529813,0.00024987804,0.00008763378,0.0011376364],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99767286,0.0011002577,0.00030609674,0.00060398754,0.0000108927925,0.0003059021],"domain_scores_gemma":[0.9990404,0.00055981387,0.00004963171,0.00029417867,0.000020379719,0.000035594385],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004373602,0.00024394829,0.00042695133,0.00022329335,0.00007462537,0.000057281206,0.00014168017,0.0004694327,0.00072569936],"category_scores_gemma":[0.00008118816,0.00020650792,0.00010398421,0.00014601434,0.00019317615,0.00005279604,0.000117643205,0.0003614129,0.000073625],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008862331,0.00002059635,0.00050643826,0.000010206928,0.00020605221,0.000010253382,0.00056683243,0.0000012652567,0.94750935,0.003100038,0.0001294883,0.047850866],"study_design_scores_gemma":[0.0007829198,0.00027002883,0.0070879017,0.000047980546,0.00007036109,0.000018758185,0.00017030841,0.000003076647,0.9603319,0.004451673,0.026511228,0.0002538752],"about_ca_topic_score_codex":0.00043908806,"about_ca_topic_score_gemma":0.000018301318,"teacher_disagreement_score":0.108619474,"about_ca_system_score_codex":0.00004148935,"about_ca_system_score_gemma":0.00005390059,"threshold_uncertainty_score":0.84211487},"labels":[],"label_agreement":null},{"id":"W4391536111","doi":"10.1007/978-1-0716-3666-4_5","title":"SARS-CoV-2 S-Protein–Ace2 Binding Analysis Using Surface Plasmon Resonance","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Surface plasmon resonance; Chemistry; Protein–protein interaction; Resonance (particle physics); Monomer; Coronavirus disease 2019 (COVID-19); Biophysics; Analytical Chemistry (journal); Nanotechnology; Materials science; Chromatography; Biochemistry; Physics; Biology; Atomic physics; Nanoparticle","score_opus":0.0892937341786765,"score_gpt":0.49097856520880073,"score_spread":0.4016848310301242,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391536111","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7180207,0.007032591,0.27319962,0.0005376492,0.00012710011,0.00021560823,0.000017200533,0.000042776905,0.0008067773],"genre_scores_gemma":[0.10907494,0.0001787057,0.8892332,0.0002961355,0.00006532688,0.000014838753,0.000043201027,0.000037822254,0.001055838],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973225,0.00096694427,0.00037816635,0.0006141687,0.00018801725,0.0005302269],"domain_scores_gemma":[0.9992104,0.00029437564,0.000041505125,0.00032873236,0.000053861546,0.000071134236],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016453222,0.00021845585,0.00059479836,0.0006438196,0.00006070354,0.000030317384,0.00017555812,0.00024671998,0.000073903546],"category_scores_gemma":[0.00028507874,0.00017770089,0.00030616377,0.0020168994,0.0001980363,0.000031088544,0.00016740628,0.0005427641,0.000032279273],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012553789,0.000031107513,0.0056070383,0.00010142978,0.00038564985,0.00067792204,0.000071759554,0.000085824584,0.9804939,0.0025845498,0.000023218932,0.009812044],"study_design_scores_gemma":[0.00023891672,0.00014928122,0.00036606248,0.00014463913,0.00020697716,0.00006395354,0.00002389688,0.04076768,0.9396041,0.0015064904,0.01672333,0.00020468127],"about_ca_topic_score_codex":0.00052033504,"about_ca_topic_score_gemma":0.000029696565,"teacher_disagreement_score":0.61603355,"about_ca_system_score_codex":0.000120369485,"about_ca_system_score_gemma":0.000116131254,"threshold_uncertainty_score":0.7246432},"labels":[],"label_agreement":null},{"id":"W4391546057","doi":"10.1007/978-1-0716-3666-4_6","title":"A Biosensor Assay Based on Coiled-Coil-Mediated Human ACE2 Receptor Capture for the Analysis of Its Interactions with the SARS-CoV-2 Receptor Binding Domain","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Natural Sciences and Engineering Research Council of Canada; National Research Council Canada; Polytechnique Montréal","funders":"","keywords":"Surface plasmon resonance; Biosensor; Biophysics; Chemistry; Receptor; Angiotensin-converting enzyme 2; Combinatorial chemistry; Biochemistry; Nanotechnology; Materials science; Coronavirus disease 2019 (COVID-19); Biology; Nanoparticle","score_opus":0.05770105376744327,"score_gpt":0.45455318966897695,"score_spread":0.3968521359015337,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4391546057","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5369129,0.0011953998,0.4510848,0.007600336,0.00040586985,0.0018114259,0.00028608728,0.000098324934,0.00060487475],"genre_scores_gemma":[0.6528502,0.000050097773,0.2975803,0.046513084,0.0003275558,0.0016557106,0.0005333928,0.00024731382,0.00024234716],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9958892,0.0024528177,0.0004235078,0.00053951144,0.00025059964,0.00044439346],"domain_scores_gemma":[0.9936886,0.0052919677,0.00013690573,0.00065378996,0.00020175966,0.000027007047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0042891684,0.00028027807,0.00062645087,0.001096016,0.0001477564,0.000031486292,0.00036083756,0.00026566949,0.000040852028],"category_scores_gemma":[0.0016903607,0.00014748881,0.0003332482,0.0027968204,0.0003477472,0.000025589992,0.00006898374,0.00075818435,0.000020003363],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0006917333,0.00011176584,0.000592185,0.00008081516,0.0013545573,0.000022866005,0.0005262415,0.000022209202,0.9929671,0.00047111526,0.00055726845,0.002602133],"study_design_scores_gemma":[0.00092822494,0.0005081094,0.00009338264,0.00014160796,0.0007506885,0.0000077095665,0.00059387705,0.011991178,0.8499545,0.000046714118,0.13480127,0.00018278458],"about_ca_topic_score_codex":0.00013082741,"about_ca_topic_score_gemma":0.00027221694,"teacher_disagreement_score":0.15350449,"about_ca_system_score_codex":0.00018312168,"about_ca_system_score_gemma":0.00020447186,"threshold_uncertainty_score":0.6014419},"labels":[],"label_agreement":null},{"id":"W4392206999","doi":"10.1007/978-1-0716-3710-4_23","title":"In Vivo Analysis of ER-Associated Protein Degradation and Ubiquitination in Arabidopsis thaliana","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Endoplasmic-reticulum-associated protein degradation; Endoplasmic reticulum; Ubiquitin; Unfolded protein response; Arabidopsis thaliana; Proteasome; Cell biology; Protein degradation; Arabidopsis; Vacuole; Autophagy; F-box protein; Biology; Ubiquitin ligase; Chemistry; Biochemistry; Mutant; Gene; Cytoplasm","score_opus":0.020123189069543083,"score_gpt":0.4037992787644024,"score_spread":0.38367608969485933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392206999","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93269145,0.0018293675,0.06459825,0.00034370847,0.00003232148,0.00027159465,0.000009388419,0.000012116234,0.00021180458],"genre_scores_gemma":[0.94645566,0.00010660983,0.05303006,0.0001812885,0.0000065473205,0.00006561316,0.000047686393,0.000010403734,0.00009611489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998474,0.00078949035,0.0003055846,0.00023982326,0.000059119808,0.00013196455],"domain_scores_gemma":[0.99964786,0.00012681712,0.00005399497,0.0001220671,0.000025350098,0.000023908644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011811719,0.00008686565,0.00035792103,0.00100529,0.0000055975065,0.00000425076,0.000040657436,0.00015646545,0.00007480014],"category_scores_gemma":[0.00038184936,0.00007916379,0.00007051475,0.0015504404,0.00005202424,0.000027575303,0.000017387745,0.00013089036,3.71654e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059812242,0.00013803905,0.029912047,0.000060359886,0.0003323143,0.00012172688,0.00032779228,0.000029947938,0.94829154,0.0051205894,0.0000025841912,0.015603274],"study_design_scores_gemma":[0.0011723726,0.00021966515,0.122074924,0.00021165032,0.00039764078,0.0000033067313,0.00011253857,0.01894567,0.83756703,0.01898761,0.00014826735,0.00015935046],"about_ca_topic_score_codex":0.00038226796,"about_ca_topic_score_gemma":0.00017606733,"teacher_disagreement_score":0.11072451,"about_ca_system_score_codex":0.000078134675,"about_ca_system_score_gemma":0.000042420066,"threshold_uncertainty_score":0.32282057},"labels":[],"label_agreement":null},{"id":"W4392207236","doi":"10.1007/978-1-0716-3710-4_22","title":"Using ER-Targeted Photoconvertible Fluorescent Proteins in Living Plant Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photosynthetic Processes and Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Endoplasmic reticulum; Organelle; Fluorescence; Cell biology; Fluorescent protein; Nanotechnology; Biology; Chemistry; Biophysics; Green fluorescent protein; Biochemistry; Physics; Materials science; Gene","score_opus":0.024393675159367263,"score_gpt":0.3611306026017957,"score_spread":0.33673692744242845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392207236","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19961429,0.0021790327,0.79667264,0.00003499058,0.000465171,0.0007419469,0.0000259134,0.000028006787,0.00023798534],"genre_scores_gemma":[0.4443901,0.00023651755,0.5545277,0.000329737,0.00008053597,0.00026428164,0.000044116256,0.00006526109,0.00006177305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976969,0.00060234644,0.00038238318,0.00070824916,0.00007735158,0.00053277676],"domain_scores_gemma":[0.9994291,0.000054197713,0.000054209308,0.0003571046,0.000027073303,0.00007828282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001150865,0.00025828273,0.00030207424,0.0002481909,0.000031602318,0.0000296388,0.00028553794,0.00035361046,0.000044808123],"category_scores_gemma":[0.00022688843,0.0002417937,0.00011387924,0.0003288029,0.000073360854,0.0000042510596,0.00023978765,0.00026340538,0.0000053010563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034130167,0.00007213313,0.00007927146,0.00009696775,0.000028874618,0.000083939056,0.000076770775,0.00012209991,0.9953025,0.0006904116,0.0000047746635,0.003408124],"study_design_scores_gemma":[0.00021483931,0.00018191864,0.000009000633,0.00019557601,0.000012695327,0.000042113155,0.00005015619,0.010748518,0.98261917,0.0016827413,0.003955406,0.00028786648],"about_ca_topic_score_codex":0.00016966039,"about_ca_topic_score_gemma":0.00005666368,"teacher_disagreement_score":0.24477579,"about_ca_system_score_codex":0.000057175792,"about_ca_system_score_gemma":0.00018821777,"threshold_uncertainty_score":0.9860061},"labels":[],"label_agreement":null},{"id":"W4392394439","doi":"10.1007/978-1-0716-3662-6_20","title":"microRNA Isolation, Expression Profiling, and Target Identification for Neuroprotection in Alzheimer’s Disease","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Neuroprotection; microRNA; Identification (biology); Disease; Isolation (microbiology); Gene expression profiling; Biology; Computational biology; Neuroscience; Medicine; Gene expression; Bioinformatics; Genetics; Gene; Pathology; Botany","score_opus":0.020737379422177227,"score_gpt":0.3730348441964416,"score_spread":0.3522974647742644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392394439","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17899112,0.01036609,0.809422,0.0001722133,0.0002429296,0.00074735493,0.000024546434,0.00002036006,0.000013388791],"genre_scores_gemma":[0.48988935,0.00011633459,0.50872636,0.0001036964,0.00011185829,0.00045812913,0.0005164605,0.00004630227,0.00003148695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982474,0.0005568346,0.0003345514,0.0006191436,0.000041649208,0.00020042928],"domain_scores_gemma":[0.9995233,0.00003931092,0.00006934326,0.0002598287,0.000049119193,0.00005913476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008169556,0.00015355385,0.00013311846,0.0002039464,0.00003764353,0.000033053486,0.000097954005,0.0001889733,0.0000054362818],"category_scores_gemma":[0.000385646,0.00015715114,0.000066715984,0.00017796122,0.00006932207,0.000008415994,0.000073334915,0.00010125464,0.0000014719602],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011386318,0.000028839644,0.0019412967,0.00006143655,0.000015306545,0.000003852124,0.000020080533,0.00021282828,0.99042445,0.0005708597,0.00003659516,0.0065705786],"study_design_scores_gemma":[0.00031384564,0.00006770239,0.0040542763,0.00003849865,0.000025904032,0.0000051823213,0.000008828612,0.009100075,0.9725666,0.009160388,0.004477885,0.00018081738],"about_ca_topic_score_codex":0.000006090611,"about_ca_topic_score_gemma":0.0000030686797,"teacher_disagreement_score":0.3108982,"about_ca_system_score_codex":0.0000223891,"about_ca_system_score_gemma":0.00006227658,"threshold_uncertainty_score":0.6408437},"labels":[],"label_agreement":null},{"id":"W4392461149","doi":"10.1007/7651_2024_517","title":"Assessment of Autophagy in Leishmania Parasites","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Research Institute in Oncology and Hematology; Children's Hospital Research Institute of Manitoba; University of Manitoba","funders":"","keywords":"Autophagy; Leishmania; Biology; Leishmaniasis; Cell biology; Acridine orange; Organelle; Intracellular parasite; Sandfly; Amastigote; Leishmania major; ATG8; Phagosome; Cutaneous leishmaniasis; Microbiology; Parasite hosting; Immunology; Intracellular; Apoptosis; Genetics","score_opus":0.04430053332276897,"score_gpt":0.5032240432943427,"score_spread":0.4589235099715737,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392461149","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4336161,0.012854356,0.53590786,0.0016879913,0.00033516122,0.00071592984,0.000007114265,0.0000736016,0.0148018515],"genre_scores_gemma":[0.3611283,0.0003040917,0.63816035,0.00013521752,0.0000235778,0.000078103614,0.0000074857253,0.000019399977,0.0001434866],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9976073,0.0010923158,0.00042531427,0.00039879733,0.00013522497,0.0003410627],"domain_scores_gemma":[0.99898547,0.00057557743,0.000035360266,0.00030325254,0.00005190628,0.000048405658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002317269,0.00014187524,0.0005491096,0.00059113035,0.000011026552,0.000008648307,0.00013436288,0.00014691366,0.00009181987],"category_scores_gemma":[0.0008470327,0.00011668019,0.00010443847,0.0006474753,0.00019512582,0.000022816694,0.00014651008,0.00041791124,0.0000058019004],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018729506,0.00011304169,0.123229474,0.0002295044,0.00010006439,0.0006049322,0.000108283966,0.00001504127,0.82038933,0.023833593,0.000039676113,0.03131833],"study_design_scores_gemma":[0.0012771352,0.0009771144,0.63818187,0.00041146515,0.000055082815,0.00008588367,0.00015696364,0.0061976984,0.32888076,0.017362157,0.0061553675,0.0002584971],"about_ca_topic_score_codex":0.00012122456,"about_ca_topic_score_gemma":0.000032961012,"teacher_disagreement_score":0.5149524,"about_ca_system_score_codex":0.00013601228,"about_ca_system_score_gemma":0.00016599502,"threshold_uncertainty_score":0.475808},"labels":[],"label_agreement":null},{"id":"W4392476597","doi":"10.1007/7651_2024_524","title":"A Lipidomics Approach to Determine the Role of Lipids and Its Crosstalk with Autophagy in Lung Cancer Metastasis","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Research Institute in Oncology and Hematology; University of Manitoba","funders":"","keywords":"Anoikis; Autophagy; Metastasis; Crosstalk; Cancer research; Lung cancer; Epithelial–mesenchymal transition; Biology; Cancer; Cancer cell; Apoptosis; Cell; Medicine; Pathology","score_opus":0.013844213631993611,"score_gpt":0.353532989085362,"score_spread":0.3396887754533684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392476597","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7116014,0.08585522,0.20062973,0.0002230018,0.00019665052,0.00054801704,0.00005072192,0.000009748417,0.0008855458],"genre_scores_gemma":[0.66503596,0.0021342176,0.33204505,0.0002383254,0.00009484496,0.00030524615,0.000015005084,0.000037745434,0.00009358165],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99835074,0.00044830557,0.0002952777,0.0005310593,0.000059578197,0.0003150231],"domain_scores_gemma":[0.9994994,0.00007972182,0.00005392923,0.00027685845,0.00004286874,0.000047226073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010383405,0.00020961514,0.00039222368,0.00020657165,0.000030865318,0.000020377054,0.0002171874,0.00014387931,0.0000048126144],"category_scores_gemma":[0.00020245157,0.00013999474,0.00006869809,0.00047207074,0.00013472016,0.0000029376718,0.0002830064,0.00016284251,1.8960255e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000082649756,0.000040037216,0.0013401614,0.00006763603,0.00017486177,0.000003768634,0.00017387625,0.00017899935,0.97379005,0.005897519,0.0000090944395,0.018241322],"study_design_scores_gemma":[0.00047724816,0.0002899092,0.0006900137,0.000031607353,0.00007821506,0.000025951636,0.00015299546,0.0052553075,0.97451353,0.00088757987,0.017342772,0.00025489766],"about_ca_topic_score_codex":0.00008152581,"about_ca_topic_score_gemma":0.00007721086,"teacher_disagreement_score":0.13141532,"about_ca_system_score_codex":0.000019986393,"about_ca_system_score_gemma":0.00006807995,"threshold_uncertainty_score":0.57088196},"labels":[],"label_agreement":null},{"id":"W4392476690","doi":"10.1007/7651_2024_528","title":"Analysis of Proliferation, Apoptosis, and Motility in Mouse Embryonic Melanocytic Precursor Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"melanin and skin pigmentation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; Western University","funders":"","keywords":"Cell sorting; Embryonic stem cell; Cell biology; Motility; Apoptosis; Biology; Green fluorescent protein; Cell growth; Stem cell; Flow cytometry; Molecular biology; Genetics; Gene","score_opus":0.014341638493256443,"score_gpt":0.3654896366665257,"score_spread":0.35114799817326925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392476690","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7020402,0.0019336278,0.29558367,0.000040065068,0.00009265094,0.00018503304,0.000018350029,0.0000060130687,0.0001004194],"genre_scores_gemma":[0.8605307,0.00039599664,0.13852896,0.0000908798,0.000019468409,0.00006049993,0.00019452057,0.000015750344,0.0001632616],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980659,0.0008918416,0.00034105463,0.00046347745,0.00005443436,0.00018327919],"domain_scores_gemma":[0.99955,0.00006543295,0.00005478001,0.0002618475,0.000032172462,0.00003577893],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010987476,0.00013633349,0.00030059114,0.00037268334,0.000012660266,0.000014300957,0.00011016382,0.00021805063,0.000014629473],"category_scores_gemma":[0.00015928675,0.00012872295,0.00009204749,0.00051173085,0.00009146588,0.0000033513654,0.000071755654,0.00010572149,8.3144124e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002834435,0.000040018014,0.013459996,0.00005571827,0.000205824,0.0000020610512,0.00011352216,0.00037728978,0.9823793,0.0006242387,0.000010617345,0.002703065],"study_design_scores_gemma":[0.00025130922,0.000135364,0.0020464368,0.000010774956,0.00011141171,0.0000016001733,0.00003177914,0.0063069123,0.9902051,0.00053945254,0.00024737735,0.0001124511],"about_ca_topic_score_codex":0.000038923976,"about_ca_topic_score_gemma":0.00007020227,"teacher_disagreement_score":0.15849048,"about_ca_system_score_codex":0.000024534644,"about_ca_system_score_gemma":0.000053148473,"threshold_uncertainty_score":0.52491695},"labels":[],"label_agreement":null},{"id":"W4392741101","doi":"10.1007/978-1-0716-3730-2","title":"Cancer Stem Cells","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Medicine, American University of Beirut; INCLIVA Instituto de Investigación Sanitaria; Centro de Investigación Biomédica en Red de Cáncer; Instituto de Salud Carlos III; Centro Pfizer-Universidad de Granada-Junta de Andalucía de Genómica e Investigación Oncológic; Universidad de Granada; Centre d'Imagerie BioMédicale; Università degli Studi di Sassari; Griffith University; Università di Bologna; Universitat de València; Università degli Studi di Padova; Kalinga Institute of Industrial Technology; Pfizer; McMaster University; Rajshahi University; American University of Beirut","keywords":"Biology","score_opus":0.04138735644888828,"score_gpt":0.4304566685452087,"score_spread":0.3890693120963204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392741101","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000036332323,0.1776683,0.35914725,0.0011037072,0.006031924,0.0012490626,0.00027900597,0.00013207897,0.45435235],"genre_scores_gemma":[0.000001882522,0.0038618422,0.34877577,0.0013956462,0.00034928526,0.00012391726,0.00005123178,0.00011032783,0.6453301],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99788946,0.00039128386,0.0004548552,0.0007542317,0.0001161769,0.00039399095],"domain_scores_gemma":[0.9990474,0.000114391056,0.000113116665,0.0005479835,0.00005626894,0.00012084962],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00078966096,0.0003781625,0.0010491295,0.00039867306,0.000013242134,0.000011008981,0.00016584691,0.000745535,0.0006607059],"category_scores_gemma":[0.00001754642,0.00031984088,0.00037616928,0.00018222052,0.00019325851,0.000005799218,0.00016252347,0.0009352034,0.000098740435],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008177804,0.000041454405,0.000015679896,0.0011371801,0.00060180214,0.0010044674,0.00008991858,0.000008113635,0.48628387,0.007384923,0.027927514,0.4754233],"study_design_scores_gemma":[0.0003585515,0.00013129001,8.09773e-7,0.00041284756,0.0004856065,0.000030651438,0.0000063416296,0.000011816517,0.14437394,0.008126891,0.8458073,0.0002539573],"about_ca_topic_score_codex":0.000097544325,"about_ca_topic_score_gemma":0.000033234086,"teacher_disagreement_score":0.8178798,"about_ca_system_score_codex":0.00046693697,"about_ca_system_score_gemma":0.0008610488,"threshold_uncertainty_score":0.9999254},"labels":[],"label_agreement":null},{"id":"W4392750770","doi":"10.1007/978-1-0716-3734-0_10","title":"Affinity Purification of Membrane β-Barrel Proteins via Biotin-Tagged Peptidiscs","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Bacterial outer membrane; Barrel (horology); Escherichia coli; Chemistry; Context (archaeology); Membrane protein; Membrane; Computational biology; Bacteria; Biology; Biochemistry; Gene","score_opus":0.019597073959857436,"score_gpt":0.3488530262263811,"score_spread":0.32925595226652365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392750770","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.11242678,0.0035670414,0.8819861,0.0002655072,0.00036377428,0.0005568096,0.000020621896,0.000033117278,0.0007802529],"genre_scores_gemma":[0.3689805,0.0002135222,0.6301722,0.00009020137,0.000092795824,0.00014340463,0.00008491833,0.00004360832,0.00017885101],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970735,0.001379172,0.0004774261,0.00064412924,0.00009778062,0.00032802665],"domain_scores_gemma":[0.9990714,0.00008083891,0.000118236814,0.0005983543,0.00006461535,0.00006654878],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018902713,0.0002438778,0.00033585087,0.000196487,0.000037624184,0.000017217137,0.0003547807,0.00047130446,0.00005986256],"category_scores_gemma":[0.0005175734,0.00022183608,0.0001914418,0.000322321,0.00016431703,0.000003941648,0.0001315723,0.00019204778,0.0000127434605],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057611378,0.00006571783,0.00008983334,0.00010317378,0.00006434746,0.000009509859,0.000045414257,0.000034955112,0.96039915,0.0030141654,0.000013508231,0.036102626],"study_design_scores_gemma":[0.00020788453,0.00030776425,0.00006742165,0.000045750185,0.00002465737,0.000019390396,0.000018763918,0.00023168974,0.986186,0.005787929,0.0068662716,0.00023647629],"about_ca_topic_score_codex":0.00004262218,"about_ca_topic_score_gemma":0.000010301121,"teacher_disagreement_score":0.25655374,"about_ca_system_score_codex":0.000018865008,"about_ca_system_score_gemma":0.000102385486,"threshold_uncertainty_score":0.90462124},"labels":[],"label_agreement":null},{"id":"W4392776487","doi":"10.1007/978-1-0716-3730-2_1","title":"Cancer Stem Cells: Current Challenges and Future Perspectives","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"CRISPR; Epigenome; Stem cell; Precision medicine; Computational biology; Biology; Cancer; Cancer stem cell; Genome editing; Bioinformatics; Medicine; Cancer research; Genetics; Gene; DNA methylation","score_opus":0.050815777846034964,"score_gpt":0.4421028928892208,"score_spread":0.3912871150431858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392776487","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0071022203,0.9356506,0.050233074,0.0044031925,0.0013855895,0.00020704126,0.000011508722,0.000040638428,0.00096612755],"genre_scores_gemma":[0.011466792,0.67757565,0.30919603,0.00027633383,0.0010281046,0.00015757307,0.000004275284,0.000051490093,0.00024372916],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99884194,0.000342034,0.00014054177,0.00042748827,0.00004935514,0.00019861512],"domain_scores_gemma":[0.9996545,0.00006340065,0.000019692257,0.00016738588,0.000028022057,0.00006704895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046993553,0.00013587064,0.00029903348,0.00015397755,0.000013438159,0.000008064051,0.000046072404,0.00010590516,0.0000702149],"category_scores_gemma":[0.000009172418,0.00010400824,0.00007855759,0.00013458285,0.00011456945,0.000012892723,0.000049906994,0.00027246095,0.0000022947215],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023036955,0.000028524988,0.00003757739,0.0002522618,0.00006746258,0.000046279038,0.0015867964,5.0158974e-7,0.14985897,0.011492619,0.000036919886,0.8365691],"study_design_scores_gemma":[0.0005183674,0.00020631304,0.00030962302,0.00019027031,0.00015793463,0.000045073528,0.0029885466,0.00009098755,0.1255828,0.002425449,0.8672815,0.00020316392],"about_ca_topic_score_codex":0.000021025957,"about_ca_topic_score_gemma":0.000017056138,"teacher_disagreement_score":0.86724454,"about_ca_system_score_codex":0.00007102893,"about_ca_system_score_gemma":0.00007117,"threshold_uncertainty_score":0.4241333},"labels":[],"label_agreement":null},{"id":"W4392820966","doi":"10.1007/978-1-0716-3734-0_6","title":"Examining Protein Translocation by β-Barrel Membrane Proteins Using Reconstituted Proteoliposomes","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"March of Dimes Canada; MaRS; University of Toronto","funders":"","keywords":"Periplasmic space; Bacterial outer membrane; Intermembrane space; Translocase of the outer membrane; Membrane protein; Cell biology; Translocase of the inner membrane; Peripheral membrane protein; Biology; Mitochondrial membrane transport protein; Inner membrane; Vesicle-associated membrane protein 8; Lipid bilayer; Biochemistry; Membrane; Integral membrane protein; Mitochondrion; Escherichia coli","score_opus":0.02936491161877818,"score_gpt":0.3479299300363834,"score_spread":0.3185650184176052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392820966","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43433163,0.00454755,0.5595408,0.00023281752,0.00029307202,0.00085415394,0.000025320414,0.000051024166,0.00012365068],"genre_scores_gemma":[0.31412515,0.0002316084,0.68466115,0.00012659487,0.00013462322,0.00033111766,0.00019142147,0.00006165051,0.00013668415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997423,0.00071345846,0.0004759087,0.00085263094,0.00007025204,0.00046475918],"domain_scores_gemma":[0.99933344,0.000019078969,0.00008218678,0.00044511992,0.000051266772,0.00006891379],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00096881256,0.0003065144,0.00033067729,0.00023111321,0.000058200694,0.00004694263,0.00031645445,0.00081502047,0.00002549142],"category_scores_gemma":[0.0002089582,0.0002919289,0.00009462921,0.00040564372,0.0002896251,0.0000056002577,0.00012265304,0.0003219706,0.000004321381],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045548964,0.000043097698,0.00005727592,0.000066884975,0.000068290035,0.000013877736,0.000024261737,0.000026092328,0.9638886,0.00088194513,0.000012184319,0.034871962],"study_design_scores_gemma":[0.00037047872,0.0003722532,0.000009262344,0.00009897655,0.000018709057,0.00005394755,0.000020471325,0.00085127656,0.98007005,0.0009795855,0.016807655,0.00034733195],"about_ca_topic_score_codex":0.00006955255,"about_ca_topic_score_gemma":0.000018498155,"teacher_disagreement_score":0.12512034,"about_ca_system_score_codex":0.0000380762,"about_ca_system_score_gemma":0.00018918373,"threshold_uncertainty_score":0.99995327},"labels":[],"label_agreement":null},{"id":"W4392821292","doi":"10.1007/978-1-0716-3734-0","title":"Transmembrane β-Barrel Proteins","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Medicine and Health, University of Sydney; Medizinische Fakultät, Rheinische Friedrich-Wilhelms-Universität Bonn; Directorate for Biological Sciences; National Institutes of Health; Rheinische Friedrich-Wilhelms-Universität Bonn; University of Miyazaki; University of Bristol; University of Leeds; Nottingham Trent University; King's College London; Centre National de la Recherche Scientifique; Aarhus Universitet; European Molecular Biology Laboratory; University of Exeter; University of Sydney; Trent University; Lehigh University","keywords":"Barrel (horology); Transmembrane protein; Chemistry; Geography; Biochemistry; Archaeology","score_opus":0.01027219253872379,"score_gpt":0.33305622057638046,"score_spread":0.32278402803765666,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392821292","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00051144965,0.05465806,0.4233853,0.0006709883,0.0017628511,0.0017145084,0.00033423508,0.00012143398,0.5168412],"genre_scores_gemma":[0.00021162153,0.0019963894,0.3474372,0.0020267074,0.0005811635,0.00045348782,0.0029132008,0.00043249532,0.6439477],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969142,0.0006743177,0.0005390517,0.0011153636,0.00011773877,0.0006392907],"domain_scores_gemma":[0.99899167,0.000047588983,0.00014648361,0.00065015804,0.000059237438,0.00010486872],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0010094068,0.00057145377,0.0006854731,0.00026344214,0.000035241017,0.0000334354,0.0005291194,0.0017494749,0.00008428919],"category_scores_gemma":[0.00021049127,0.00055864645,0.00048750802,0.00016140392,0.00023215798,0.0000013557328,0.00022607116,0.0007512503,0.0000622475],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040901064,0.0000790398,0.000028365886,0.0002507943,0.00046587264,0.000069421876,0.00003499276,0.000033757762,0.95071405,0.007458175,0.007698986,0.03312564],"study_design_scores_gemma":[0.0006006834,0.0004163284,0.000004027979,0.00015704881,0.0001248976,0.000009116215,0.000010895707,0.00003175339,0.104638,0.047597867,0.84562325,0.00078609394],"about_ca_topic_score_codex":0.000012780086,"about_ca_topic_score_gemma":0.00003123708,"teacher_disagreement_score":0.8460761,"about_ca_system_score_codex":0.00007391111,"about_ca_system_score_gemma":0.00044750955,"threshold_uncertainty_score":0.9996865},"labels":[],"label_agreement":null},{"id":"W4392931528","doi":"10.1007/7651_2024_523","title":"Evaluation of Autophagy in Conjunctival Fibroblasts","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Children's Hospital Research Institute of Manitoba; Research Institute in Oncology and Hematology; CancerCare Manitoba","funders":"","keywords":"Autophagy; Vernal keratoconjunctivitis; Immunocytochemistry; Immune system; Pathophysiology; Immunology; Medicine; Biology; Cell biology; Apoptosis; Pathology; Biochemistry","score_opus":0.04855677836197105,"score_gpt":0.46378822275255327,"score_spread":0.41523144439058224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392931528","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7101608,0.06017397,0.22000101,0.00046125436,0.0019712525,0.0009907447,0.000034727764,0.000091863956,0.006114384],"genre_scores_gemma":[0.9224138,0.00010268382,0.07694273,0.00003792823,0.000013016497,0.00016832577,0.000032911987,0.000021462616,0.00026710122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9928762,0.0059278477,0.0003773376,0.0003958756,0.00006313922,0.00035964552],"domain_scores_gemma":[0.9987762,0.0008351767,0.000043384673,0.00022270712,0.000112138696,0.000010374999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0067854444,0.0001422804,0.00035951653,0.00055557763,0.000018458297,0.0000045960155,0.00017828876,0.00030349797,0.00032994317],"category_scores_gemma":[0.0023633628,0.00012257522,0.00007745983,0.0004665742,0.00035994203,0.000028552962,0.0001705313,0.0004101444,0.000051823503],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036576184,0.000043343665,0.000549615,0.000032162305,0.00013042292,0.000015068563,0.00025638187,0.00010504743,0.8981806,0.0067220917,0.000054618795,0.09387404],"study_design_scores_gemma":[0.0011320967,0.00024935414,0.0039515314,0.00008792943,0.000042883046,0.000024040566,0.00009899824,0.00096616504,0.9636848,0.02580477,0.0038149154,0.00014252066],"about_ca_topic_score_codex":0.00010319315,"about_ca_topic_score_gemma":0.0000611698,"teacher_disagreement_score":0.21225305,"about_ca_system_score_codex":0.00013210376,"about_ca_system_score_gemma":0.0002170985,"threshold_uncertainty_score":0.49984723},"labels":[],"label_agreement":null},{"id":"W4392956976","doi":"10.1007/978-1-0716-3746-3_8","title":"Generation of Knockout Mouse Trophoblast Stem Cells by CRISPR/Cas9","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary; Alberta Children's Hospital","funders":"","keywords":"Placentation; Trophoblast; CRISPR; Biology; Genome editing; Cas9; Placenta; Stem cell; Cell biology; Gene knockout; Genetics; Gene; Fetus; Pregnancy","score_opus":0.02077154445257113,"score_gpt":0.40430729924948083,"score_spread":0.3835357547969097,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4392956976","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20358957,0.009105475,0.78656846,0.000037019894,0.0003911745,0.00013374024,0.00003492064,0.000016697744,0.0001229668],"genre_scores_gemma":[0.56099045,0.00085141364,0.43630227,0.00018566802,0.00021731562,0.00006754126,0.00016580104,0.00008538363,0.0011341486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984969,0.00035949892,0.00034424264,0.00047287336,0.000059999362,0.00026646873],"domain_scores_gemma":[0.99949014,0.000031536096,0.00004058273,0.00034694868,0.000037127353,0.000053657317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049757055,0.00019407253,0.00023872069,0.00012044348,0.000017537142,0.000015541122,0.00018175018,0.0002793125,0.000018126451],"category_scores_gemma":[0.000036405072,0.00018976926,0.00011876328,0.00016958186,0.00007301151,0.0000019548743,0.00010073282,0.00014169226,0.0000044396616],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011977145,0.000026017155,0.000036206504,0.0000459171,0.00004584436,0.000006142106,0.0000379987,0.0009466832,0.9797754,0.0002169355,0.00082558667,0.018025242],"study_design_scores_gemma":[0.00018930016,0.00021770564,0.000004883918,0.000010899969,0.000016293076,0.000008666619,0.000024225388,0.0026137242,0.9688061,0.00006343492,0.027859682,0.00018511013],"about_ca_topic_score_codex":0.000019403662,"about_ca_topic_score_gemma":0.0000073369138,"teacher_disagreement_score":0.3574009,"about_ca_system_score_codex":0.000017771341,"about_ca_system_score_gemma":0.000040056668,"threshold_uncertainty_score":0.7738565},"labels":[],"label_agreement":null},{"id":"W4393051395","doi":"10.1007/978-1-0716-3629-9_17","title":"Methods for Biochemical Isolation of Insoluble Tau in Rodent Models of Tauopathies","year":2024,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre de Recherche en Sciences Animales de Deschambault; Ministère de l'Agriculture, des Pêcheries et de l'Alimentation; Université Laval","funders":"","keywords":"Tauopathy; Tau protein; Hyperphosphorylation; Neuroscience; Tau pathology; Biology; Computational biology; Disease; Chemistry; Cell biology; Alzheimer's disease; Neurodegeneration; Pathology; Medicine","score_opus":0.13188519209720678,"score_gpt":0.5497437145321484,"score_spread":0.41785852243494165,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393051395","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000014853958,0.5837392,0.41497973,0.000013094456,0.00006822339,0.0010635584,0.00005153803,0.000007347287,0.000062448795],"genre_scores_gemma":[0.000020395526,0.4858565,0.51351047,0.000006583002,0.000013705112,0.0003583502,0.00019536856,0.00003201988,0.000006585336],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99555856,0.002319088,0.0010554524,0.0005795102,0.000115920746,0.0003714957],"domain_scores_gemma":[0.99832934,0.00071408524,0.00026799488,0.0004671683,0.00011675412,0.00010467662],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0024526867,0.000347489,0.0024053329,0.00091582804,0.000009183023,0.000004046298,0.00019359653,0.00062684057,0.000009824097],"category_scores_gemma":[0.0008556048,0.0002585757,0.00067113235,0.0006986975,0.00020046806,0.000020355646,0.00018520662,0.00041468866,0.0000015613384],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020908946,0.0005655702,0.000042857857,0.027372824,0.0044686333,0.00005772586,0.00007220118,0.0000081501275,0.00962888,0.0036671315,0.00002231504,0.9538846],"study_design_scores_gemma":[0.014358585,0.008953014,0.000037371658,0.094613686,0.048525006,0.00039767698,0.00024604137,0.027551511,0.19834125,0.42338768,0.18007287,0.003515299],"about_ca_topic_score_codex":0.00007331929,"about_ca_topic_score_gemma":0.00000199063,"teacher_disagreement_score":0.9503693,"about_ca_system_score_codex":0.00015500025,"about_ca_system_score_gemma":0.0005435512,"threshold_uncertainty_score":0.99998665},"labels":[],"label_agreement":null},{"id":"W4393061742","doi":"10.1007/978-1-0716-3629-9_16","title":"Western Blot of Tau Protein from Mouse Brains Extracts: How to Avoid Signal Artifacts","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Alzheimer's disease research and treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Epitope; Tau protein; Genetically modified mouse; Hyperphosphorylation; Blot; Western blot; Monoclonal antibody; Antibody; Phosphorylation; Transgene; Molecular biology; Microtubule; Tauopathy; Biology; Microtubule-associated protein; Cell biology; Alzheimer's disease; Biochemistry; Immunology; Disease; Medicine; Neurodegeneration; Pathology","score_opus":0.05029317932165224,"score_gpt":0.4288133632918203,"score_spread":0.37852018397016807,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393061742","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68043923,0.009698317,0.30688444,0.0016258433,0.00006847093,0.0009509608,0.00009872094,0.000056439658,0.00017755241],"genre_scores_gemma":[0.6793219,0.000021737134,0.31990418,0.00025292797,0.000065268556,0.00014709224,0.00008889472,0.00003630595,0.00016172531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977266,0.0009566177,0.00025556257,0.0004324318,0.00017085092,0.00045791946],"domain_scores_gemma":[0.9989446,0.00026558136,0.000040538285,0.0003548034,0.000053236323,0.00034124096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006405382,0.00019647255,0.0004125025,0.00027954637,0.00001815338,0.000017621696,0.00012380327,0.00016995882,0.00016370609],"category_scores_gemma":[0.00041678557,0.00015701758,0.00013068279,0.0003012565,0.00013736078,0.00003956068,0.000105764455,0.0002766692,0.000064095824],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021849846,0.00034057355,0.005024178,0.00008995295,0.0016294629,0.00063073356,0.0001919848,0.0000024422172,0.9707004,0.00026461045,0.000025782314,0.020881398],"study_design_scores_gemma":[0.0007735023,0.00071288995,0.0029343043,0.00019796607,0.00018726512,0.00001485646,0.000059553997,0.000092373135,0.9918282,0.001431074,0.0016091948,0.00015883004],"about_ca_topic_score_codex":0.00016319117,"about_ca_topic_score_gemma":0.000017219669,"teacher_disagreement_score":0.021127807,"about_ca_system_score_codex":0.00006973208,"about_ca_system_score_gemma":0.00017551356,"threshold_uncertainty_score":0.64029914},"labels":[],"label_agreement":null},{"id":"W4393170909","doi":"10.1007/978-1-0716-3798-2","title":"Phage Engineering and Analysis","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of California, Los Angeles; State Key Laboratory of Tribology; Universidade Federal do Rio de Janeiro; Universiti Sains Malaysia; Tsinghua University; Helsingin Yliopisto; KU Leuven; Universidade de São Paulo; Tel Aviv University; University of Toronto; Zhejiang University; Directorate for Biological Sciences; Israel Institute for Biological Research; Huazhong University of Science and Technology; University of Alberta; Ministry of Education, India; University of Pittsburgh","keywords":"Engineering","score_opus":0.009543904338005404,"score_gpt":0.3361198458035115,"score_spread":0.3265759414655061,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393170909","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00087230204,0.0021660756,0.8689735,0.00009741025,0.0005541902,0.00019296771,0.00005463479,0.000053430074,0.12703551],"genre_scores_gemma":[0.0001293933,0.00016455361,0.7687062,0.00022897494,0.000040923445,0.0000229192,0.0000982082,0.000043928034,0.23056489],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9990536,0.00012382981,0.00019561284,0.00042155196,0.000026817826,0.0001785671],"domain_scores_gemma":[0.999636,0.00007711107,0.00004209915,0.00020232788,0.0000020380444,0.000040406416],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0003150034,0.00017991861,0.00032754138,0.00021991345,0.000014054867,0.000020515537,0.00012424088,0.00027375066,0.0012478343],"category_scores_gemma":[0.00003322282,0.00017100744,0.00014670538,0.00022615462,0.00008799737,0.000017223556,0.0003017121,0.00037742435,0.00009095882],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000017339603,0.000007487412,0.000039276827,0.000019388033,0.00027337688,0.00007699648,0.000049940067,0.00018434852,0.9797417,0.0007086283,0.00046504076,0.018432107],"study_design_scores_gemma":[0.000109132954,0.000059321606,0.00084896304,0.000048346657,0.00092651387,0.00004483162,0.0000036093368,0.002582716,0.012847355,0.005672421,0.9763226,0.00053417496],"about_ca_topic_score_codex":0.0000708611,"about_ca_topic_score_gemma":0.000040686882,"teacher_disagreement_score":0.97585756,"about_ca_system_score_codex":0.00014216223,"about_ca_system_score_gemma":0.000008006293,"threshold_uncertainty_score":0.99966514},"labels":[],"label_agreement":null},{"id":"W4393170914","doi":"10.1007/978-1-0716-3798-2_10","title":"Liquid Glycan Array","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Glycan; Glycoconjugate; Avidity; Microbead (research); Chemistry; Biochemistry; Glycoprotein; Biology; Genetics","score_opus":0.022763845141611384,"score_gpt":0.42850090569082955,"score_spread":0.40573706054921815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393170914","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.058908165,0.005345535,0.9272286,0.00063185225,0.00040523586,0.0002525648,0.000009895713,0.00003996032,0.0071781464],"genre_scores_gemma":[0.30380297,0.0003675942,0.69217306,0.0008926378,0.00029418227,0.00018296578,0.00018631779,0.00007639821,0.0020238655],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978753,0.00081009715,0.00025496527,0.00057559495,0.00008677004,0.0003973073],"domain_scores_gemma":[0.9993767,0.0000463557,0.00002284668,0.00041795312,0.00004754074,0.000088596695],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011466342,0.0001738409,0.00017904106,0.00022540837,0.000034441397,0.00003346416,0.00027172585,0.00029982367,0.0001505608],"category_scores_gemma":[0.0004139509,0.0001584344,0.00012449472,0.00035223618,0.00013992764,0.0000024563478,0.00012690859,0.0002595552,0.000049184346],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083532046,0.00002212024,0.00014325243,0.000022128026,0.000033410684,0.00003576506,0.000022949056,0.000018897894,0.97434455,0.0041074823,0.00016489698,0.02100099],"study_design_scores_gemma":[0.00017263187,0.00037232405,0.00004697284,0.000013236485,0.0000038974567,0.000020540347,0.0000130748,0.000118620024,0.7355343,0.0016246446,0.26192495,0.00015479092],"about_ca_topic_score_codex":0.000034429995,"about_ca_topic_score_gemma":0.00002378774,"teacher_disagreement_score":0.26176006,"about_ca_system_score_codex":0.000026006379,"about_ca_system_score_gemma":0.00012075695,"threshold_uncertainty_score":0.64607674},"labels":[],"label_agreement":null},{"id":"W4393170951","doi":"10.1007/978-1-0716-3798-2_4","title":"Combining a Base Deaminase Mutator with Phage-Assisted Evolution","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Mutagenesis; Biology; Genetics; Gene; Genome; Bacteriophage; Function (biology); Mutation; Directed evolution; Computational biology; Mutant; Escherichia coli","score_opus":0.011433148240831333,"score_gpt":0.40229655459531977,"score_spread":0.3908634063544884,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393170951","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15151745,0.005628906,0.84199286,0.00006430766,0.0002404732,0.00014903497,0.000007626957,0.0000383022,0.00036101346],"genre_scores_gemma":[0.56407356,0.000026039266,0.43552804,0.00008793452,0.000049605027,0.000049685666,0.000060029724,0.00003462966,0.000090491325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984862,0.00037477267,0.00022258279,0.0005270993,0.000058792903,0.00033053366],"domain_scores_gemma":[0.9994856,0.000050280792,0.000027600669,0.00032768075,0.00003459179,0.00007422522],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00061666174,0.00020660146,0.00019817389,0.0001660287,0.000032666994,0.00002385003,0.00014589034,0.00020944457,0.000013526273],"category_scores_gemma":[0.00014955715,0.00018423486,0.00008173088,0.0003052483,0.00009814384,0.0000024438052,0.000086956396,0.00018126446,0.00000480847],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041843025,0.000031893625,0.00059805985,0.000047939167,0.000059212874,0.00012479516,0.000035065048,0.00047555869,0.97886527,0.0012206525,0.000030675295,0.018469015],"study_design_scores_gemma":[0.0006797738,0.00054169237,0.0010122797,0.00007774998,0.000045162702,0.00021900084,0.000079030266,0.0042572697,0.98479384,0.0007881152,0.0071391305,0.0003669317],"about_ca_topic_score_codex":0.000028050215,"about_ca_topic_score_gemma":0.000022633318,"teacher_disagreement_score":0.41255608,"about_ca_system_score_codex":0.000036828413,"about_ca_system_score_gemma":0.0000864213,"threshold_uncertainty_score":0.75128794},"labels":[],"label_agreement":null},{"id":"W4393285629","doi":"10.1007/978-1-0716-3646-6","title":"Peptidomics","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Protein Degradation and Inhibitors","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Laboratório Nacional de Biociências; Lomonosov Moscow State University; Nebraska Center for Integrated Biomolecular Communication; Centro Nacional de Pesquisa em Energia e Materiais; Universidade Estadual Paulista; Science for Life Laboratory; Ulster University; University of Nebraska-Lincoln; Uppsala Universitet; Novo Nordisk Foundation Center for Basic Metabolic Research; Novo Nordisk; Universiteit Antwerpen; University of Illinois at Urbana-Champaign; Skolkovo Institute of Science and Technology; Universidade de São Paulo; KU Leuven; Technische Universität München; University of Toronto; University of Wisconsin-Madison","keywords":"Computer science","score_opus":0.016204306916638794,"score_gpt":0.37111645980899566,"score_spread":0.3549121528923569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393285629","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00011042167,0.016299069,0.6040217,0.00025806497,0.0018111449,0.0006076873,0.00007773409,0.000055015666,0.3767591],"genre_scores_gemma":[0.00002687577,0.0006630016,0.44207928,0.0010825772,0.00062464527,0.00010132476,0.0012003776,0.00014795491,0.554074],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99756646,0.00056409306,0.00049455516,0.00090883306,0.00008930775,0.00037674734],"domain_scores_gemma":[0.9989675,0.00003658671,0.00013767378,0.00071560586,0.00005898729,0.000083645726],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009428825,0.0004279598,0.00046488343,0.00029173013,0.000025960311,0.000027661034,0.00043691305,0.001378691,0.000079250174],"category_scores_gemma":[0.0003254243,0.00042110175,0.0003088122,0.000113338196,0.00021455139,0.0000012065179,0.00041952118,0.00061859767,0.00010860455],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003678593,0.000025651114,0.0000117626205,0.00008809915,0.0001393834,0.000049397986,0.0000155178,0.000008681954,0.914752,0.024943694,0.03893115,0.020997865],"study_design_scores_gemma":[0.00022219821,0.00016781913,9.708068e-7,0.00006007179,0.000030080451,0.000023328186,0.00000341951,0.000022814183,0.18974955,0.040449806,0.76887566,0.00039428286],"about_ca_topic_score_codex":0.000005329411,"about_ca_topic_score_gemma":0.000011225342,"teacher_disagreement_score":0.7299445,"about_ca_system_score_codex":0.000089535984,"about_ca_system_score_gemma":0.00040474487,"threshold_uncertainty_score":0.99991775},"labels":[],"label_agreement":null},{"id":"W4393285653","doi":"10.1007/978-1-0716-3646-6_4","title":"Data-Independent Acquisition Peptidomics","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Pipeline (software); Workflow; Computer science; Throughput; Protocol (science); Data acquisition; Data mining; Matching (statistics); Real-time computing; Database; Operating system","score_opus":0.03653417789160042,"score_gpt":0.4446703254315251,"score_spread":0.4081361475399247,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393285653","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0032955909,0.0010219499,0.99079895,0.00025239371,0.00006362162,0.00009251542,0.00011367313,0.00016431416,0.0041969647],"genre_scores_gemma":[0.00815875,0.00014679108,0.9908454,0.00013852367,0.000060890503,0.00011520767,0.0003527294,0.000023759727,0.00015793635],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990209,0.00008488659,0.00021218952,0.00046523646,0.000037232476,0.0001795786],"domain_scores_gemma":[0.99912035,0.000107150554,0.000032014075,0.00069738255,0.000013648844,0.00002942747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005531348,0.000107970925,0.00013734605,0.000066668385,0.00002492419,0.000021027234,0.00040583225,0.00019105033,0.00020513889],"category_scores_gemma":[0.000056600344,0.00010567189,0.00004126671,0.00013476437,0.00005511907,0.000036459587,0.00029074898,0.0002818181,0.000014991262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000004223775,0.000013904482,0.000038674745,0.00002502761,0.000010932638,0.000015368934,0.000010248317,0.000018702352,0.9111823,0.049447015,0.00004195877,0.03919168],"study_design_scores_gemma":[0.000086978296,0.000009068818,0.000002780098,0.000025842894,0.000011937209,0.000023507158,0.000014248727,0.006500032,0.7420883,0.18698046,0.06411543,0.000141378],"about_ca_topic_score_codex":0.000011814137,"about_ca_topic_score_gemma":0.0000025510508,"teacher_disagreement_score":0.16909392,"about_ca_system_score_codex":0.000059131762,"about_ca_system_score_gemma":0.000027895925,"threshold_uncertainty_score":0.43091744},"labels":[],"label_agreement":null},{"id":"W4393853662","doi":"10.1007/978-1-0716-3822-4_14","title":"Profiling Complex RAS-Effector Interactions Using NMR Spectroscopy","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protein Kinase Regulation and GTPase Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Effector; GTPase; Affinities; Cell biology; GTP'; Biology; GTPase-activating protein; KRAS; Computational biology; Chemistry; Small GTPase; Small molecule; Enzyme; Biochemistry; Signal transduction; G protein; Mutation; Gene","score_opus":0.044173739023151214,"score_gpt":0.43435501669519255,"score_spread":0.39018127767204136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393853662","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12927915,0.0026901537,0.8666789,0.000089714114,0.00037013815,0.0003066043,0.000014742178,0.000043463973,0.0005271517],"genre_scores_gemma":[0.18684621,0.00002671837,0.8123986,0.0002197257,0.00020654859,0.000047927355,0.00016236564,0.000038756578,0.000053133328],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979012,0.00083404244,0.00031416805,0.0005536515,0.000060505437,0.0003364072],"domain_scores_gemma":[0.9994745,0.000058527636,0.000051829516,0.00030932736,0.000040245803,0.00006556416],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000803074,0.00021085494,0.0002317728,0.00021916092,0.00006196621,0.000042185344,0.0001571914,0.00018871108,0.000091252776],"category_scores_gemma":[0.00021487629,0.00020482371,0.0001556476,0.0002925235,0.00010698064,0.0000045466095,0.00013153779,0.00023345799,0.000013372998],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029440413,0.00002473163,0.00040243476,0.00004098206,0.000050254155,0.000027054142,0.000016557817,0.00049956917,0.9921146,0.0022064717,0.00002516425,0.0045627505],"study_design_scores_gemma":[0.00021615581,0.00009808615,0.00007801116,0.00005096105,0.000021073583,0.000060987153,0.000016254662,0.02081292,0.9613078,0.0014982219,0.0156102525,0.00022923131],"about_ca_topic_score_codex":0.000026099904,"about_ca_topic_score_gemma":0.000008091013,"teacher_disagreement_score":0.057567056,"about_ca_system_score_codex":0.00005454859,"about_ca_system_score_gemma":0.00008656699,"threshold_uncertainty_score":0.83524686},"labels":[],"label_agreement":null},{"id":"W4393977849","doi":"10.1007/978-1-0716-3842-2_5","title":"Spatial and Temporal Localization of Connexins in Cells Using Confocal Microscopy","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Connexins and lens biology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Connexin; Endoplasmic reticulum; Cell biology; Confocal microscopy; Gap junction; Confocal; Subcellular localization; Biology; Intracellular; Chemistry; Biophysics; Cytoplasm; Physics; Optics","score_opus":0.01973385984005731,"score_gpt":0.3896930525195067,"score_spread":0.3699591926794494,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393977849","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38898122,0.002542502,0.60802907,0.000029462306,0.0002079142,0.00012302476,0.000014182605,0.0000048738852,0.00006775063],"genre_scores_gemma":[0.8504517,0.00015971129,0.14906527,0.00017009898,0.00004608273,0.000008307923,0.000063657324,0.000019694357,0.000015464999],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818474,0.0007019879,0.00037765192,0.00045949148,0.000030401457,0.0002457051],"domain_scores_gemma":[0.99961495,0.000059745616,0.000056954897,0.000198176,0.00003233458,0.000037833317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007267398,0.00016393178,0.00029245246,0.00020294885,0.000015769036,0.000010076841,0.00010796753,0.00037265907,0.00001794232],"category_scores_gemma":[0.00010911309,0.00015679482,0.00006091495,0.0001805513,0.00029185892,0.000002231134,0.00013458185,0.00013977433,6.441593e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006943375,0.000028266175,0.012146099,0.00004549542,0.000022427763,0.000021449656,0.000057662302,0.000105110244,0.97772944,0.0011233761,0.0000058458068,0.008645384],"study_design_scores_gemma":[0.00048192352,0.00033587907,0.0002562759,0.000040651445,0.000012648271,0.000027077183,0.0000521696,0.012894581,0.9762364,0.0011518938,0.008317155,0.00019334904],"about_ca_topic_score_codex":0.00057247735,"about_ca_topic_score_gemma":0.0002572847,"teacher_disagreement_score":0.46147048,"about_ca_system_score_codex":0.000017633643,"about_ca_system_score_gemma":0.00009364951,"threshold_uncertainty_score":0.63939077},"labels":[],"label_agreement":null},{"id":"W4393978647","doi":"10.1007/7651_2024_531","title":"Characterization of Bitter Taste Receptor-Dependent Autophagy in Oral Epithelial Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Research Institute in Oncology and Hematology; University of Manitoba; CancerCare Manitoba; Research Manitoba","funders":"","keywords":"Autophagy; Cell biology; Receptor; Innate immune system; Biology; Immune system; Flow cytometry; Acridine orange; Immunology; Biochemistry; Apoptosis","score_opus":0.018250884738470488,"score_gpt":0.38257182545890084,"score_spread":0.36432094072043036,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4393978647","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7108755,0.00066599593,0.28721896,0.0001926019,0.000609423,0.0001971878,0.000028923336,0.000030126866,0.0001812888],"genre_scores_gemma":[0.65719616,0.00047516022,0.33914265,0.0017368392,0.00019988655,0.00010442699,0.00024074112,0.00007911876,0.0008249923],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982353,0.00076005916,0.00038647244,0.00031943203,0.00007879513,0.00021998014],"domain_scores_gemma":[0.9995684,0.000075802534,0.000053904943,0.0002293147,0.000024969291,0.00004760234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078590785,0.00014101606,0.00037264827,0.00034646,0.000007506043,0.00000617009,0.00009277792,0.00020499637,0.00035401137],"category_scores_gemma":[0.000054335847,0.000120381075,0.000098479715,0.0003259188,0.00008088271,0.000026367192,0.000043978293,0.00021927034,0.000027250982],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011696205,0.000090567606,0.00039272098,0.0000733692,0.00004900405,0.0001605361,0.00017416892,0.000004439297,0.9513043,0.0012112199,0.0000037683342,0.046418913],"study_design_scores_gemma":[0.0007126262,0.00019693915,0.002141983,0.00007777648,0.000025244417,0.000010522801,0.000011182506,0.00048578597,0.9907408,0.0016467932,0.003847558,0.000102811544],"about_ca_topic_score_codex":0.000028769664,"about_ca_topic_score_gemma":0.0000017868731,"teacher_disagreement_score":0.05367933,"about_ca_system_score_codex":0.000052187406,"about_ca_system_score_gemma":0.000079898986,"threshold_uncertainty_score":0.49089977},"labels":[],"label_agreement":null},{"id":"W4394750027","doi":"10.1007/7651_2024_532","title":"Evaluation of Mitochondrial Phagy (Mitophagy) in Human Non-small Adenocarcinoma Tumor Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Research Institute in Oncology and Hematology; University of Manitoba","funders":"","keywords":"Mitophagy; Autophagy; Mitochondrion; Biology; Lung cancer; Metastasis; Cancer research; Cancer cell; Cancer; Adenocarcinoma; Cell biology; Pathology; Medicine; Apoptosis; Genetics","score_opus":0.04248648374622561,"score_gpt":0.43405353188113777,"score_spread":0.39156704813491217,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394750027","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85411286,0.010350834,0.13277328,0.0000556199,0.00083908805,0.0007916927,0.000008021237,0.000028372715,0.0010402211],"genre_scores_gemma":[0.7075274,0.00003629585,0.29160455,0.00028061346,0.00022335578,0.00017200701,0.000041234463,0.00004338353,0.000071160226],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99689895,0.0016180428,0.0005135388,0.0004694978,0.0002129613,0.00028698953],"domain_scores_gemma":[0.9992141,0.00015771356,0.000073354764,0.00038194156,0.00010499557,0.00006786802],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002384465,0.00018894719,0.0004818941,0.0005004431,0.000015378102,0.0000074509817,0.00015407988,0.00020380835,0.00026919844],"category_scores_gemma":[0.00022808088,0.00017133608,0.00016921101,0.00045680188,0.00012037422,0.000021263308,0.00005182022,0.00029822584,0.000011165846],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000084339146,0.00015842573,0.0012366014,0.00009187602,0.00009779208,0.00031169728,0.00022698978,0.00004762179,0.9775939,0.0008945272,0.000018778957,0.019237438],"study_design_scores_gemma":[0.0024812901,0.0004146912,0.005199771,0.00014371693,0.00020590259,0.000019552734,0.00004144019,0.0040650764,0.9718877,0.015180539,0.00021391333,0.00014642753],"about_ca_topic_score_codex":0.00009411085,"about_ca_topic_score_gemma":0.000011130243,"teacher_disagreement_score":0.15883128,"about_ca_system_score_codex":0.00013130906,"about_ca_system_score_gemma":0.00029639673,"threshold_uncertainty_score":0.69868827},"labels":[],"label_agreement":null},{"id":"W4394873536","doi":"10.1007/978-1-0716-3810-1_4","title":"Two-Photon FRET/FLIM Imaging of Cerebral Neurons","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Lunenfeld-Tanenbaum Research Institute; University of Toronto","funders":"","keywords":"Förster resonance energy transfer; Fluorescence-lifetime imaging microscopy; Two-photon excitation microscopy; Fluorescence; Microscopy; Neuroimaging; Biophysics; Chemistry; Neuroscience; Biology; Physics; Optics","score_opus":0.012127633127772808,"score_gpt":0.368396567413577,"score_spread":0.3562689342858042,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394873536","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39549783,0.007123142,0.58795655,0.00034950423,0.0006471961,0.00021862471,0.000011236571,0.00003026242,0.008165623],"genre_scores_gemma":[0.5493683,0.00018610377,0.4494779,0.00048515998,0.000058509802,0.00003495372,0.00011141635,0.00004377946,0.00023385571],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832827,0.00049255835,0.00031608786,0.00048968295,0.00006103783,0.00031238823],"domain_scores_gemma":[0.9995307,0.000049286074,0.000047842834,0.00029116083,0.000033615506,0.000047404268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00065170205,0.00018518178,0.00021998209,0.00017255453,0.000022240145,0.000015994761,0.00023730085,0.00012621672,0.000043755368],"category_scores_gemma":[0.00017776506,0.00017484812,0.00013914522,0.0002446377,0.00017012247,0.000002969314,0.0001811982,0.00015687876,0.0000056571917],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003054119,0.0000224249,0.013965957,0.000034043198,0.000033008833,0.000025994306,0.000038407772,0.000020543384,0.9670356,0.0039977296,0.00013103291,0.014664746],"study_design_scores_gemma":[0.0004582336,0.00014940377,0.00148964,0.000033873126,0.000021185586,0.00003653038,0.000067954075,0.000706419,0.9654135,0.011209882,0.020119423,0.0002939527],"about_ca_topic_score_codex":0.000047812457,"about_ca_topic_score_gemma":0.000012026519,"teacher_disagreement_score":0.15387048,"about_ca_system_score_codex":0.000011515522,"about_ca_system_score_gemma":0.00009065619,"threshold_uncertainty_score":0.7130099},"labels":[],"label_agreement":null},{"id":"W4394873786","doi":"10.1007/978-1-0716-3810-1_9","title":"BioID Analysis of Actin-Binding Proteins","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biotin and Related Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Michael's Hospital; Toronto Metropolitan University","funders":"","keywords":"Biotinylation; Actin-binding protein; Actin; Actin remodeling; Cytochalasin D; Biotin; Chemistry; Cell biology; Function (biology); Plasma protein binding; Biochemistry; Biophysics; Actin cytoskeleton; Biology; Cytoskeleton; Cell","score_opus":0.018029604106239664,"score_gpt":0.40120778709400917,"score_spread":0.3831781829877695,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4394873786","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2241202,0.017170066,0.75461644,0.00031725387,0.00049592456,0.00027283863,0.000037126854,0.000032796735,0.0029373686],"genre_scores_gemma":[0.29157612,0.0017138055,0.70554906,0.00015315968,0.00007807726,0.000055376462,0.000159132,0.000041943113,0.00067335565],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983579,0.0005351536,0.0003220309,0.0004694754,0.00005367398,0.0002617498],"domain_scores_gemma":[0.9995007,0.000059402766,0.00006327378,0.00030351157,0.0000375949,0.000035542187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086649705,0.0001670618,0.0003564415,0.0004861587,0.000030198988,0.0000098946975,0.00018645043,0.00038952896,0.000025985275],"category_scores_gemma":[0.00021041476,0.00013722721,0.00027931383,0.0010576821,0.00018449777,0.0000012568124,0.00016968496,0.00020474075,0.0000032859648],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019250952,0.000030352481,0.0017184599,0.00003986785,0.0014942926,0.000012666858,0.000063055835,0.000059105507,0.985489,0.0013921306,0.000040103452,0.009641694],"study_design_scores_gemma":[0.00013075302,0.000164352,0.00030750892,0.000027393735,0.0003114885,0.0000053729973,0.00006176436,0.00048718537,0.98468524,0.00030377478,0.013344031,0.00017114847],"about_ca_topic_score_codex":0.000023851564,"about_ca_topic_score_gemma":0.000017311595,"teacher_disagreement_score":0.06745591,"about_ca_system_score_codex":0.000015045755,"about_ca_system_score_gemma":0.00004318114,"threshold_uncertainty_score":0.55959636},"labels":[],"label_agreement":null},{"id":"W4395016393","doi":"10.1007/7651_2024_538","title":"Assessment of Stiffness-Dependent Autophagosome Formation and Apoptosis in Embryonal Rhabdomyosarcoma Tumor Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Research Institute in Oncology and Hematology; University of Manitoba","funders":"","keywords":"Autophagy; Cell biology; Extracellular matrix; Autophagosome; Chemistry; Cancer cell; Tumor microenvironment; Signal transduction; Apoptosis; Programmed cell death; Cancer research; Biology; Cancer; Tumor cells; Biochemistry","score_opus":0.017783269556203317,"score_gpt":0.404833150998748,"score_spread":0.3870498814425447,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4395016393","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7136597,0.0027680418,0.28252435,0.0001430393,0.0002061798,0.00029819543,0.000014386433,0.000024859837,0.00036122114],"genre_scores_gemma":[0.74347895,0.00013742055,0.25596586,0.00026923014,0.000021213464,0.00005900361,0.000023661109,0.000015912194,0.000028781129],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984646,0.00053377426,0.00040620417,0.00028366488,0.000105440355,0.00020634149],"domain_scores_gemma":[0.9994751,0.00018912823,0.000058649475,0.00019304402,0.000025465064,0.00005858644],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008750632,0.0001410289,0.00038332274,0.0003784558,0.000012383445,0.000009361763,0.00007747618,0.000115401526,0.00007418322],"category_scores_gemma":[0.000050632214,0.00012048369,0.00007617869,0.00025909426,0.00009332588,0.000045075467,0.00006240678,0.00022879522,0.0000018763767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048540034,0.0001251578,0.001409875,0.00025612934,0.00005112114,0.00014516266,0.000110275,0.000018303612,0.9573105,0.0082460195,0.0000032797961,0.032275654],"study_design_scores_gemma":[0.0014689254,0.00027320476,0.042804725,0.00019417434,0.000059313646,0.000059737802,0.000084518644,0.009427612,0.9321607,0.013008565,0.00030391625,0.00015463746],"about_ca_topic_score_codex":0.000025973843,"about_ca_topic_score_gemma":0.0000017922678,"teacher_disagreement_score":0.04139485,"about_ca_system_score_codex":0.00007646064,"about_ca_system_score_gemma":0.00010732014,"threshold_uncertainty_score":0.49131823},"labels":[],"label_agreement":null},{"id":"W4396219636","doi":"10.1007/978-1-0716-3581-0_26","title":"BOLD v4: A Centralized Bioinformatics Platform for DNA-Based Biodiversity Data","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Environmental DNA in Biodiversity Studies","field":"Environmental Science","cited_by":147,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Barcode; Data science; Biodiversity; Identification (biology); Data management; Resource (disambiguation); Biological data; DNA barcoding; Geography; Computer science; Biology; Evolutionary biology; Ecology; Data mining; Bioinformatics","score_opus":0.05916941792184425,"score_gpt":0.3580988747862043,"score_spread":0.29892945686436,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396219636","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041758236,0.0004298024,0.9541233,0.0007169071,0.0005017132,0.00069993647,0.0008476479,0.00010469997,0.00081776106],"genre_scores_gemma":[0.0021508925,0.000066908025,0.9964837,0.0008651006,0.000009517402,0.000017691205,0.00035065008,0.000009103898,0.000046444406],"study_design_codex":"observational","study_design_gemma":"not_applicable","domain_scores_codex":[0.99847513,0.000160373,0.000262322,0.0005406682,0.00012205711,0.0004394632],"domain_scores_gemma":[0.9989933,0.00030091245,0.00005472599,0.00057599734,0.000002801524,0.00007226954],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010635593,0.00020759382,0.00025699136,0.000097328004,0.000121277924,0.000029113637,0.00076219894,0.00017297518,0.00032880937],"category_scores_gemma":[0.00018456313,0.00019090572,0.000099723584,0.0002678058,0.0004866748,0.00015456037,0.0012098907,0.00015629474,0.00023299645],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031923302,0.0005197128,0.4641695,0.00045364458,0.00043719518,0.0001930291,0.00151944,0.0010373727,0.3649153,0.0015389693,0.037934,0.12696257],"study_design_scores_gemma":[0.0038254773,0.00076996966,0.028136225,0.00009713781,0.0003693315,0.000020317464,0.0007820351,0.09715293,0.22502083,0.0074779675,0.63456225,0.0017855368],"about_ca_topic_score_codex":0.00010296774,"about_ca_topic_score_gemma":0.0000235195,"teacher_disagreement_score":0.59662825,"about_ca_system_score_codex":0.00025087694,"about_ca_system_score_gemma":0.000008225805,"threshold_uncertainty_score":0.7784909},"labels":[],"label_agreement":null},{"id":"W4396219663","doi":"10.1007/978-1-0716-3581-0_3","title":"Delimiting Species with Single-Locus DNA Sequences","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Locus (genetics); Genetics; Biology; Evolutionary biology; Computational biology; Gene","score_opus":0.03230404968220804,"score_gpt":0.3427966041326693,"score_spread":0.3104925544504613,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396219663","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35159642,0.0020195174,0.6415264,0.00025959892,0.00029455195,0.00011200513,0.000013837871,0.000026893633,0.0041507804],"genre_scores_gemma":[0.5443915,0.00005074191,0.45458844,0.0003244924,0.00010713645,0.000008033792,0.00008021894,0.000017655666,0.00043176464],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867094,0.0003806114,0.00017824669,0.00044554155,0.00006808018,0.00025660673],"domain_scores_gemma":[0.99960905,0.000038629292,0.00003836967,0.00022568551,0.000041840078,0.000046448135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00037064296,0.00016463491,0.00016234773,0.000112177746,0.000045432967,0.000041240728,0.00018742282,0.00021752469,0.00005616122],"category_scores_gemma":[0.000106191495,0.00013658813,0.00006910463,0.00022246364,0.0001727891,0.0000028684728,0.00010660745,0.0001350995,0.0000053555964],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002276441,0.000008842544,0.0025861594,0.000018759414,0.000045951172,0.000043692788,0.00006523366,0.0002780064,0.9794847,0.0028782005,0.000048142087,0.0145195965],"study_design_scores_gemma":[0.00022607899,0.00035295976,0.0007855746,0.00003457612,0.000027837286,0.000092468064,0.00017412555,0.000093134164,0.91508466,0.0033873117,0.07945558,0.00028570704],"about_ca_topic_score_codex":0.000016019907,"about_ca_topic_score_gemma":0.000027791079,"teacher_disagreement_score":0.1927951,"about_ca_system_score_codex":0.000015942227,"about_ca_system_score_gemma":0.000050766084,"threshold_uncertainty_score":0.5569902},"labels":[],"label_agreement":null},{"id":"W4396219795","doi":"10.1007/978-1-0716-3581-0_12","title":"DNA Barcodes Using a Dual Nanopore Device","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanopore and Nanochannel Transport Studies","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Human Genome Research Institute; McGill University","keywords":"Nanopore; Molecular dynamics; Brownian motion; Scale (ratio); Physics; Algorithm; Chemistry; Materials science; Nanotechnology; Computer science; Computational chemistry","score_opus":0.03340773616626278,"score_gpt":0.3746272789054822,"score_spread":0.3412195427392194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396219795","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.089523606,0.020012744,0.8881578,0.00005306746,0.00086479494,0.00011985987,0.000011620793,0.00026598753,0.0009905215],"genre_scores_gemma":[0.18449841,0.00043125762,0.81471515,0.00010311881,0.000096588476,0.0000327446,0.000016076336,0.000065115746,0.00004154387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988899,0.00016842515,0.00026624967,0.00027935146,0.0000487482,0.00034731344],"domain_scores_gemma":[0.9996568,0.00011882686,0.000010495064,0.00016022075,0.000016440736,0.000037218495],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005546451,0.0001951348,0.00029064636,0.0002442385,0.000032455024,0.000012839867,0.000102079954,0.00016657483,0.000030208248],"category_scores_gemma":[0.000034474477,0.00017796562,0.00009186048,0.00046243455,0.000074362724,0.000032974178,0.000038196573,0.00020025713,0.000008130295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003191698,0.0000070884475,0.00016541382,0.00012639434,0.000090744994,0.0002863504,0.0002677381,0.0013129356,0.9840885,0.0024304017,0.000025528738,0.011195711],"study_design_scores_gemma":[0.00023378935,0.000060573802,0.00008869533,0.00015019662,0.000071766066,0.00006846016,0.000107012056,0.021823382,0.9378817,0.013827449,0.025213495,0.0004734468],"about_ca_topic_score_codex":0.000022643531,"about_ca_topic_score_gemma":0.000016569616,"teacher_disagreement_score":0.09497481,"about_ca_system_score_codex":0.000043697783,"about_ca_system_score_gemma":0.000022510923,"threshold_uncertainty_score":0.72572273},"labels":[],"label_agreement":null},{"id":"W4396233843","doi":"10.1007/978-1-0716-3581-0_24","title":"A Measure of the DNA Barcode Gap for Applied and Basic Research","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"DNA barcoding; Intraspecific competition; Pairwise comparison; Barcode; Interspecific competition; Biology; Evolutionary biology; Genetic distance; Taxon; Taxonomy (biology); Ecology; Artificial intelligence; Computer science; Genetic variation; Genetics; Gene","score_opus":0.11369198032912492,"score_gpt":0.476734775668896,"score_spread":0.3630427953397711,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396233843","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07048723,0.00397719,0.92088705,0.0012192655,0.0004344262,0.00078619656,0.000038311293,0.000013159182,0.0021571873],"genre_scores_gemma":[0.844426,0.00010037946,0.15426345,0.00017920224,0.00006729172,0.00031448793,0.00005090533,0.00002990762,0.000568409],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99829125,0.0007895026,0.00024173762,0.0004066368,0.00007826148,0.00019258185],"domain_scores_gemma":[0.99924135,0.00014278539,0.000038636765,0.00043272413,0.000117224656,0.00002728708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025860427,0.0000890841,0.00012662649,0.00012127503,0.000061786464,0.000019487139,0.00025195308,0.00018910225,0.0000070362426],"category_scores_gemma":[0.0006536933,0.000068287736,0.00007522709,0.00029244664,0.00032214954,0.0000011026191,0.00012440227,0.000145979,0.000001792809],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022888484,0.000016249865,0.00005897745,0.000053889114,0.000025084084,1.5484144e-7,0.000053064236,0.0000027360459,0.90833265,0.0814334,0.00026829046,0.009732595],"study_design_scores_gemma":[0.00018372525,0.00005577595,0.00024838018,0.000016875794,0.000009945741,0.000004207345,0.000063306536,0.00013877917,0.9358936,0.010216202,0.05309202,0.00007719057],"about_ca_topic_score_codex":0.0000040253303,"about_ca_topic_score_gemma":0.0000065830936,"teacher_disagreement_score":0.7739387,"about_ca_system_score_codex":0.00000962222,"about_ca_system_score_gemma":0.000082915685,"threshold_uncertainty_score":0.27846932},"labels":[],"label_agreement":null},{"id":"W4396671366","doi":"10.1007/978-1-0716-3834-7_15","title":"Using Dimensionality Reduction to Visualize Phenotypic Changes in High-Throughput Microscopy","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Dimensionality reduction; Throughput; Reduction (mathematics); Microscopy; Phenotype; Computer science; Materials science; Biological system; Biology; Artificial intelligence; Physics; Mathematics; Optics; Geometry; Genetics; Telecommunications","score_opus":0.03116517508971988,"score_gpt":0.4628641043572993,"score_spread":0.4316989292675794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396671366","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37737718,0.0021006304,0.61973757,0.00026717116,0.00016306179,0.00022043797,0.000003801376,0.000031372936,0.00009873884],"genre_scores_gemma":[0.1674503,0.00017621186,0.83143824,0.0005077763,0.00012490069,0.0000640381,0.00009523048,0.000042298456,0.00010098746],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972779,0.0010920163,0.00034407084,0.0008519893,0.00007062113,0.0003633781],"domain_scores_gemma":[0.9993159,0.000036009948,0.0000499446,0.00048860075,0.00005267006,0.000056876925],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014352459,0.00022865295,0.00033040193,0.00037127038,0.00003192161,0.0000278218,0.00020620612,0.00032030063,0.00002928298],"category_scores_gemma":[0.0002439495,0.00023127763,0.000098241224,0.000633054,0.00011287622,0.0000042447696,0.00028231504,0.00019497932,0.0000054439806],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004254817,0.00004827791,0.00033225163,0.000024730332,0.000040933443,0.000024675786,0.000044680815,0.00009773412,0.9904278,0.00082358206,0.00013000872,0.007962772],"study_design_scores_gemma":[0.00014427082,0.00015368543,0.00013460682,0.000044176402,0.000025859948,0.000023516335,0.000026371315,0.00033717038,0.9848368,0.0046502235,0.009375214,0.0002480688],"about_ca_topic_score_codex":0.0004574448,"about_ca_topic_score_gemma":0.00014001716,"teacher_disagreement_score":0.21170066,"about_ca_system_score_codex":0.000095663716,"about_ca_system_score_gemma":0.00006469189,"threshold_uncertainty_score":0.9431228},"labels":[],"label_agreement":null},{"id":"W4396796114","doi":"10.1007/978-1-0716-3830-9_14","title":"Characterizing Functional Contributions of Specific GluN2 Subunits to Individual Postsynaptic NMDAR Responses Using Biophysical Parameters","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Carleton University; Ottawa Hospital","funders":"","keywords":"Postsynaptic potential; Chemistry; Physics; Neuroscience; Biology; Receptor; Biochemistry","score_opus":0.1623348931802006,"score_gpt":0.47759549081188135,"score_spread":0.31526059763168074,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396796114","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.86443317,0.00009188164,0.13331506,0.000724206,0.0009223449,0.00031641332,0.00013135425,0.000046926896,0.000018652901],"genre_scores_gemma":[0.9663864,0.000050657367,0.031788837,0.0016117385,0.000053539912,0.000043455973,0.000004050668,0.000027718725,0.000033614182],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9943885,0.003631618,0.00038509245,0.00079170504,0.00022545172,0.00057760027],"domain_scores_gemma":[0.9969933,0.0024940823,0.00005781446,0.00026309708,0.00005714878,0.00013457658],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013906169,0.00019009464,0.0003247742,0.00086584303,0.00012112377,0.000054925,0.00043160355,0.00012852825,0.000043893153],"category_scores_gemma":[0.0024403855,0.00017715151,0.00011554707,0.0018372572,0.0006756564,0.00009494244,0.0003173462,0.00053264387,0.000030342719],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022568971,0.000077794306,0.00012516118,0.000011907283,0.000009242363,0.00032940353,0.00006452925,0.000052824606,0.9932708,0.003956005,0.0000106180105,0.0018660091],"study_design_scores_gemma":[0.00020585884,0.00042737354,0.0006902505,0.000024610083,0.000014676089,0.00012553253,0.000012523265,0.0015693462,0.9949635,0.00076413987,0.0010482381,0.00015390514],"about_ca_topic_score_codex":0.0000069505236,"about_ca_topic_score_gemma":1.9909315e-7,"teacher_disagreement_score":0.10195322,"about_ca_system_score_codex":0.00006476616,"about_ca_system_score_gemma":0.00018262016,"threshold_uncertainty_score":0.7224029},"labels":[],"label_agreement":null},{"id":"W4396957744","doi":"10.1007/978-1-0716-3850-7_6","title":"Enhancing the Efficiency of Conventional Surface Immunoassays Within Standard Labware Using Microscale Flows","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biosensors and Analytical Detection","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Microscale chemistry; Psychology","score_opus":0.013771597251676565,"score_gpt":0.33913018039469595,"score_spread":0.32535858314301935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4396957744","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3168198,0.0021460594,0.6803984,0.000022394788,0.00044401194,0.000055461107,0.000010940651,0.00003473239,0.00006816757],"genre_scores_gemma":[0.5564587,0.000025187423,0.44344324,0.000014010599,0.000019414172,0.0000019880217,0.0000029199878,0.000017592352,0.000016929192],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990186,0.0003153903,0.00029037648,0.00015594279,0.00005706153,0.00016260037],"domain_scores_gemma":[0.9996375,0.00017005147,0.000020075231,0.00012931938,0.000026357402,0.000016685093],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011679148,0.000098422686,0.00017992246,0.00006525199,0.000030019539,0.00001548112,0.00009532167,0.00011891408,0.000028490354],"category_scores_gemma":[0.00009198824,0.000072819115,0.000089011286,0.00032067992,0.00008938849,0.000015267622,0.000033142853,0.00023341416,0.0000020590664],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000045678007,0.000004200534,0.000023983357,0.000062696556,0.00002647201,0.0000052239257,0.00006305744,0.017309258,0.9797162,0.00170311,0.0000015752794,0.0010796748],"study_design_scores_gemma":[0.00006537481,0.00002738483,0.0000100307,0.000060166603,0.000014214266,0.000009569434,0.00003957036,0.23557614,0.7617059,0.0021003638,0.00032052974,0.00007078726],"about_ca_topic_score_codex":0.000025247293,"about_ca_topic_score_gemma":0.000010022312,"teacher_disagreement_score":0.23963892,"about_ca_system_score_codex":0.000053323467,"about_ca_system_score_gemma":0.00002307016,"threshold_uncertainty_score":0.29694775},"labels":[],"label_agreement":null},{"id":"W4397005490","doi":"10.1007/978-1-0716-3722-7_9","title":"Proteomic Profiling of Samples Derived from a Murine Model Following Cryptococcus neoformans Infection","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Artificial Intelligence in Medicine (Canada); Université Laval; University of Guelph","funders":"","keywords":"Cryptococcus neoformans; Microbiology; Profiling (computer programming); Biology; Cryptococcus; Computational biology; Virology; Computer science; Programming language","score_opus":0.04599156923834384,"score_gpt":0.4175200814824601,"score_spread":0.37152851224411626,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4397005490","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4816634,0.00074526237,0.516775,0.00005354069,0.00016897044,0.00031678998,0.000004637541,0.000040166535,0.0002322023],"genre_scores_gemma":[0.3427427,0.00007927227,0.6569015,0.000045112203,0.00003100277,0.00015374717,0.000020868414,0.000014490163,0.000011323264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989443,0.00022779654,0.00031550185,0.00027046035,0.000047617432,0.00019434674],"domain_scores_gemma":[0.99960065,0.00012482956,0.00003924255,0.0001706386,0.00003560602,0.00002905697],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005350575,0.0001345699,0.0003740388,0.0002454578,0.00003844861,0.000007296975,0.0000371533,0.00013822943,0.000011927479],"category_scores_gemma":[0.00033791785,0.00010943756,0.00018105449,0.00026873066,0.000063160085,0.000029507511,0.00007100168,0.00023625094,0.000002314479],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003489363,0.00004153293,0.026749747,0.00010373223,0.00020689565,0.000019561161,0.00019659729,0.00060929335,0.96313,0.001286934,0.0000021766814,0.007618642],"study_design_scores_gemma":[0.00051753334,0.00027088498,0.005130673,0.00020139347,0.00015062351,0.00000770229,0.00002869868,0.05209554,0.92806727,0.013239254,0.00015843214,0.00013202084],"about_ca_topic_score_codex":0.00047389895,"about_ca_topic_score_gemma":0.000017305565,"teacher_disagreement_score":0.14012647,"about_ca_system_score_codex":0.00005905559,"about_ca_system_score_gemma":0.00006723469,"threshold_uncertainty_score":0.44627342},"labels":[],"label_agreement":null},{"id":"W4397005741","doi":"10.1007/978-1-0716-3722-7_4","title":"In Vivo Modeling of Cryptococcus neoformans Infection and Collection of Murine Samples","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Cryptococcus neoformans; In vivo; Microbiology; Cryptococcus; Biology; Virology; Biotechnology","score_opus":0.040417169856503274,"score_gpt":0.4178417919266302,"score_spread":0.3774246220701269,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4397005741","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46585917,0.0011179424,0.53195083,0.0000772036,0.00015174087,0.00015330162,0.000002161771,0.000009773531,0.00067786156],"genre_scores_gemma":[0.75776225,0.00083206693,0.2412578,0.000034033994,0.00002082253,0.000042335352,0.0000021979258,0.000008941873,0.000039574483],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99929047,0.00017527089,0.00026842425,0.0001405596,0.0000272553,0.00009799595],"domain_scores_gemma":[0.9997307,0.000113954615,0.000026575435,0.000075310025,0.000039935385,0.000013503857],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005722989,0.00007040913,0.00026622543,0.0004291945,0.00001478185,0.0000018497377,0.000012887677,0.00009186171,0.00002020251],"category_scores_gemma":[0.0002078668,0.0000595148,0.00004522351,0.00043151365,0.000065337495,0.000020803003,0.0000332303,0.0001236344,1.619835e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000631435,0.00006606326,0.037879348,0.00033411747,0.00006168343,0.000008492752,0.00037429223,0.0013745518,0.95114356,0.004402891,0.000013693725,0.004278141],"study_design_scores_gemma":[0.0016598562,0.001880256,0.013547624,0.0005466243,0.00014160191,0.00012990375,0.00022203407,0.26162282,0.6893531,0.027789235,0.002860382,0.0002465661],"about_ca_topic_score_codex":0.0011739505,"about_ca_topic_score_gemma":0.00014541812,"teacher_disagreement_score":0.29190305,"about_ca_system_score_codex":0.00003337652,"about_ca_system_score_gemma":0.00002506635,"threshold_uncertainty_score":0.24269432},"labels":[],"label_agreement":null},{"id":"W4398241255","doi":"10.1007/978-1-0716-3519-3_7","title":"Classification and Identification of Non-canonical Base Pairs and Structural Motifs","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal; McGill University","funders":"","keywords":"Identification (biology); Base (topology); Non canonical; Computer science; Mathematics; Biology","score_opus":0.024043810632819473,"score_gpt":0.3632712651746019,"score_spread":0.33922745454178244,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398241255","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5723384,0.0011911691,0.42614397,0.00005480936,0.000080360835,0.0001277447,0.0000046507143,0.000002517205,0.000056356603],"genre_scores_gemma":[0.74592245,0.0000962647,0.2538286,0.000048027894,0.00003142711,0.000024284736,0.000021688402,0.000009813741,0.000017493305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985353,0.0006550179,0.0002928879,0.0002785121,0.00004183588,0.00019645864],"domain_scores_gemma":[0.99946123,0.00005044699,0.00012623885,0.0002648552,0.000032256965,0.00006498484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012900513,0.00011660309,0.000176679,0.00006709916,0.000028912726,0.0000066171756,0.00009518743,0.00023541058,0.0000071236973],"category_scores_gemma":[0.00034886328,0.000107102285,0.000036944268,0.000070028305,0.00015713964,0.000004643198,0.000088355075,0.000067163746,5.4304434e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025225143,0.00001451652,0.018604128,0.000017521308,0.000015050277,2.788999e-7,0.00004042788,0.000001812638,0.9538453,0.0018170527,0.0000022109605,0.025616469],"study_design_scores_gemma":[0.00021482678,0.000095646465,0.0488117,0.0000053141243,0.000014764492,0.000013515329,0.000052273626,0.0003916777,0.94824487,0.0017914948,0.0002484393,0.00011549983],"about_ca_topic_score_codex":0.0000132024,"about_ca_topic_score_gemma":0.0000022089575,"teacher_disagreement_score":0.173584,"about_ca_system_score_codex":0.0000068928844,"about_ca_system_score_gemma":0.000018506646,"threshold_uncertainty_score":0.43675044},"labels":[],"label_agreement":null},{"id":"W4398253120","doi":"10.1007/978-1-0716-3519-3_4","title":"RNA Secondary Structure Modeling Following the IPANEMAP Workflow","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Montreal Clinical Research Institute","funders":"Agence Nationale de la Recherche","keywords":"Workflow; Computational biology; Computer science; Biology; Database","score_opus":0.017853679700023075,"score_gpt":0.3504073463695088,"score_spread":0.33255366666948577,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4398253120","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10386082,0.01699627,0.87654376,0.0003969861,0.0010359682,0.00025829457,0.000011414857,0.000032081283,0.00086442573],"genre_scores_gemma":[0.485449,0.00012402343,0.5131255,0.00071954465,0.00022704381,0.000061386185,0.000049636572,0.000055281012,0.00018863576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974259,0.0011272357,0.00031744392,0.0006252414,0.00008642031,0.00041774646],"domain_scores_gemma":[0.99923325,0.00009398541,0.00003706301,0.00055966846,0.000021760943,0.000054299224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013911717,0.00025697716,0.00025827132,0.00010461884,0.00008981104,0.000058138827,0.00044899722,0.0004256979,0.00006679742],"category_scores_gemma":[0.00026592432,0.00018438646,0.00026145446,0.00023174632,0.000066921224,0.0000039957836,0.00020503395,0.00036078878,0.000006113705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016345966,0.0000059361405,0.000016799506,0.000017929486,0.00009370364,0.000037371043,0.00005211565,0.00063534535,0.8889631,0.0021465889,0.000028356382,0.10798643],"study_design_scores_gemma":[0.0001727077,0.000102149344,0.000003989349,0.000048991315,0.000037062626,0.000037156144,0.000054402917,0.005343292,0.9289323,0.05201637,0.012963012,0.00028858046],"about_ca_topic_score_codex":0.000019839757,"about_ca_topic_score_gemma":0.000013938659,"teacher_disagreement_score":0.3815882,"about_ca_system_score_codex":0.000018480441,"about_ca_system_score_gemma":0.00010268635,"threshold_uncertainty_score":0.75190616},"labels":[],"label_agreement":null},{"id":"W43986657","doi":"10.1007/978-1-61779-343-1_3","title":"Isolation of Muscle Stem Cells by Fluorescence Activated Cell Sorting Cytometry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":112,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"","keywords":"Cell sorting; Isolation (microbiology); Cell biology; Stem cell; Flow cytometry; Sorting; Cell; Chemistry; Biology; Molecular biology; Computer science; Biochemistry; Bioinformatics","score_opus":0.0207642199312125,"score_gpt":0.3238648039268133,"score_spread":0.3031005839956008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W43986657","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5296965,0.0004666796,0.4684867,0.0000060255647,0.00010817857,0.00012765221,0.000008100413,0.000009194249,0.0010909649],"genre_scores_gemma":[0.73308885,0.00007122134,0.26661572,0.00010027953,0.0000121576,0.000016678789,0.000038955826,0.00001905081,0.000037102916],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979023,0.00086391444,0.00038951694,0.00047182728,0.000047755697,0.0003247021],"domain_scores_gemma":[0.9992174,0.000050149378,0.0002308682,0.00039047442,0.000057901765,0.000053242635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006076266,0.00018765838,0.00026999772,0.000115714516,0.000035158166,0.0000025085876,0.00028482467,0.00039288795,0.000039198636],"category_scores_gemma":[0.00008473501,0.0001885624,0.00010289903,0.00024964096,0.00018714018,0.00000415204,0.0001478079,0.00016596538,0.0000029844377],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012429105,0.00013475087,0.0024545284,0.000024232253,0.000022281121,0.0000013892687,0.00008643399,0.0000151245795,0.98953795,0.00010249204,0.000046345085,0.0074501634],"study_design_scores_gemma":[0.0004439464,0.00034139128,0.00086929405,0.0000067934157,0.000010631205,8.5811985e-7,0.00011740569,0.000082930586,0.9968909,0.00080232986,0.00024001382,0.00019351064],"about_ca_topic_score_codex":0.00006284947,"about_ca_topic_score_gemma":0.0000024687206,"teacher_disagreement_score":0.20339234,"about_ca_system_score_codex":0.000009521406,"about_ca_system_score_gemma":0.000038145135,"threshold_uncertainty_score":0.76893514},"labels":[],"label_agreement":null},{"id":"W4399212579","doi":"10.1007/978-1-0716-3838-5_10","title":"AGO, a Framework for the Reconstruction of Ancestral Syntenies and Gene Orders","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Phylogenomics; Biology; Gene duplication; Epigraph; Genomics; Evolutionary biology; Gene; Inference; Genome; Gene family; Python (programming language); Phylogenetics; Computational biology; Phylogenetic tree; Computer science; Genetics; Artificial intelligence; Clade; Programming language","score_opus":0.02605442923063,"score_gpt":0.38182467567127737,"score_spread":0.35577024644064736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399212579","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27039862,0.025763148,0.70298564,0.00023761505,0.0003846689,0.00017577659,0.000018406925,0.0000022598826,0.000033864984],"genre_scores_gemma":[0.30172458,0.00164755,0.69637746,0.00008650212,0.00007020156,0.000064018095,0.0000049566,0.000012130023,0.000012580566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99920493,0.00015102648,0.00018300349,0.00028101628,0.000020479598,0.00015953607],"domain_scores_gemma":[0.99952,0.00021175788,0.000039900024,0.00017729617,0.000034224646,0.000016811808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004898255,0.00010713211,0.00015742093,0.000045766574,0.000037273345,0.00000992004,0.000105198626,0.00015469723,0.0000020950702],"category_scores_gemma":[0.00030399737,0.000078524616,0.00007707777,0.00008799313,0.00027450794,4.033917e-7,0.00007531228,0.00007875792,1.1404271e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003076313,0.0000051572124,0.0010687211,0.000030861574,0.000114971015,7.0093324e-7,0.000052707524,0.00004529814,0.9146377,0.0087602185,0.000008390782,0.0752445],"study_design_scores_gemma":[0.00024157921,0.0004230561,0.0014219673,0.00003743197,0.00006665126,0.00006006518,0.00023766862,0.00069291005,0.8940676,0.09092796,0.011623611,0.00019949155],"about_ca_topic_score_codex":0.000021772106,"about_ca_topic_score_gemma":0.000011999471,"teacher_disagreement_score":0.08216774,"about_ca_system_score_codex":0.000004345022,"about_ca_system_score_gemma":0.00003172935,"threshold_uncertainty_score":0.3202141},"labels":[],"label_agreement":null},{"id":"W4399493335","doi":"10.1007/978-1-0716-3818-7_8","title":"Voltage Clamp Fluorometry: Illuminating the Dynamics of Ion Channels","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cardiac electrophysiology and arrhythmias","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Voltage; Ion; Fluorescence spectroscopy; Chemistry; Fluorescence; Analytical Chemistry (journal); Materials science; Optics; Electrical engineering; Physics; Engineering; Chromatography","score_opus":0.012984639778163325,"score_gpt":0.3721373748071191,"score_spread":0.3591527350289558,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399493335","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2315443,0.003868614,0.7611993,0.0010869649,0.00096439105,0.00024982885,0.00000654007,0.000040327664,0.0010397258],"genre_scores_gemma":[0.8216699,0.00015187927,0.17695859,0.0004559215,0.00027691934,0.000042535747,0.000056609195,0.000032119813,0.00035553498],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99844474,0.0006964224,0.00026324933,0.00028461995,0.000057060603,0.0002539206],"domain_scores_gemma":[0.9990777,0.00052279327,0.000047751088,0.0002859596,0.000037875936,0.000027964514],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013552873,0.0001279615,0.00037651023,0.00022717181,0.000030188407,0.000004808826,0.00009414333,0.00022328639,0.00003114233],"category_scores_gemma":[0.0006228409,0.00008637403,0.0001860174,0.0005937568,0.0002606214,0.0000125525985,0.00008182378,0.00045460823,0.000004724732],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000339732,0.000018262592,0.00015147218,0.00007779652,0.00009243212,0.00019872501,0.00015023639,0.000037620506,0.86982906,0.040712114,0.000018000645,0.088680334],"study_design_scores_gemma":[0.00071963744,0.0011204176,0.0011982371,0.00027494016,0.0002039674,0.00075620046,0.00034230636,0.04560601,0.89140123,0.054812722,0.0032327774,0.00033154804],"about_ca_topic_score_codex":0.000021252525,"about_ca_topic_score_gemma":0.000002280955,"teacher_disagreement_score":0.5901256,"about_ca_system_score_codex":0.000058198937,"about_ca_system_score_gemma":0.0000527379,"threshold_uncertainty_score":0.35222307},"labels":[],"label_agreement":null},{"id":"W4399546334","doi":"10.1007/978-1-0716-3802-6_12","title":"Using Gas Exchange to Study CO2 Release During Photosynthesis with Steady- and Nonsteady-State Approaches","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Water Relations and Carbon Dynamics","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Photosynthesis; Steady state (chemistry); Carbon dioxide; Environmental science; Thermodynamics; Physics; Chemistry; Physical chemistry; Biochemistry","score_opus":0.038294114403148234,"score_gpt":0.3171082023564992,"score_spread":0.278814087953351,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399546334","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7380726,0.00009368618,0.26112556,0.000030476596,0.000027995398,0.00029555804,0.000007405079,0.000022235101,0.00032452535],"genre_scores_gemma":[0.5930091,0.000012364415,0.40683812,0.00002835646,0.0000040109467,0.000039374096,0.0000020835312,0.000016619579,0.000049974875],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9984986,0.0005847702,0.0001575688,0.00044507658,0.00007183619,0.00024212632],"domain_scores_gemma":[0.9996379,0.00007536669,0.000023558609,0.00019043605,0.0000020517512,0.00007068437],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067623635,0.00014527045,0.00017857853,0.0001231521,0.000053823576,0.000030177467,0.00010648036,0.00005863023,0.00003851332],"category_scores_gemma":[0.000025116487,0.00011470654,0.000021729491,0.0003229478,0.000094973075,0.0000397407,0.00020453347,0.00011088345,0.000007045852],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007374266,0.00013074804,0.06324352,0.000039434788,0.00007660758,0.0005357785,0.0026210733,0.01938532,0.86463046,0.00008212975,4.866965e-7,0.049180716],"study_design_scores_gemma":[0.0016173569,0.0010653518,0.025923256,0.0002268098,0.00029824724,0.00073393655,0.001440308,0.7323891,0.22968286,0.004045149,0.0008828281,0.0016948272],"about_ca_topic_score_codex":0.00024668532,"about_ca_topic_score_gemma":0.00012726003,"teacher_disagreement_score":0.71300375,"about_ca_system_score_codex":0.00008250132,"about_ca_system_score_gemma":0.000006502885,"threshold_uncertainty_score":0.4677597},"labels":[],"label_agreement":null},{"id":"W4399753979","doi":"10.1007/978-1-0716-3898-9_4","title":"Techniques for Genetic Manipulation","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microfluidic and Bio-sensing Technologies","field":"Engineering","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Cegep de Saint Hyacinthe","funders":"","keywords":"Computer science; Computational biology; Biology","score_opus":0.028215818157537088,"score_gpt":0.3694194931079925,"score_spread":0.3412036749504554,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399753979","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006009025,0.007642263,0.98460233,0.000091015456,0.00027414545,0.00017687175,0.0000030461658,0.0009342994,0.00026700107],"genre_scores_gemma":[0.027941024,0.00025516064,0.9716537,0.000034914836,0.000026446045,0.000041107836,0.000007881336,0.000021621956,0.000018114064],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9994668,0.00006182526,0.00014208966,0.000159235,0.000014887316,0.00015518998],"domain_scores_gemma":[0.999764,0.000073309406,0.0000061162314,0.00013894912,0.000008926421,0.000008658261],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00029150152,0.00008936959,0.00011534361,0.00017261562,0.000010192806,0.000011453528,0.0000872626,0.00020709177,0.0000044511144],"category_scores_gemma":[0.00006399749,0.000080351274,0.00004375009,0.00015014209,0.00004164833,0.000009142609,0.000026241396,0.00009765096,0.0000024890267],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[8.4550055e-7,0.0000014208701,0.000034280256,0.000035899204,0.000007072707,0.000006243488,0.000008413018,0.000022916274,0.7382263,0.004554923,0.00020100709,0.25690067],"study_design_scores_gemma":[0.00003020895,0.00003504992,0.00004468219,0.00002232254,0.000007266156,0.00001251739,0.000006204632,0.015615475,0.8878059,0.05424819,0.042068947,0.00010325711],"about_ca_topic_score_codex":0.0000037975244,"about_ca_topic_score_gemma":8.554233e-7,"teacher_disagreement_score":0.2567974,"about_ca_system_score_codex":0.000032899454,"about_ca_system_score_gemma":0.0000054569264,"threshold_uncertainty_score":0.327663},"labels":[],"label_agreement":null},{"id":"W4399754029","doi":"10.1007/978-1-0716-3898-9_9","title":"Experimental Intraperitoneal Infection of Piglets","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial infections and disease research","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Université de Montréal","funders":"","keywords":"Medicine","score_opus":0.024459322469304413,"score_gpt":0.44002592314618266,"score_spread":0.41556660067687823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399754029","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5852553,0.02320045,0.38793004,0.00008300628,0.0013794,0.00023272727,0.000018183335,0.000078805206,0.001822064],"genre_scores_gemma":[0.9753593,0.00012372209,0.024185145,0.000053179752,0.000023624163,0.000055314882,0.000051247647,0.000016983615,0.00013144693],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99816215,0.0010493605,0.00025363947,0.0002751135,0.000012918306,0.00024684236],"domain_scores_gemma":[0.99962187,0.00014384552,0.000024118712,0.00016668801,0.000026766267,0.000016705799],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059751276,0.00011099614,0.0002140111,0.0003435049,0.000034770273,0.000009223172,0.00008303186,0.00025044705,0.0009000601],"category_scores_gemma":[0.000092961054,0.00009994106,0.0001164286,0.00032405395,0.00026563974,0.00002806252,0.00008842946,0.00026612933,0.0000675332],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030898627,0.00012913645,0.00055392977,0.00003162659,0.00007314132,0.000012936796,0.00008040021,0.000006088576,0.9674018,0.012040641,0.00010998505,0.01952943],"study_design_scores_gemma":[0.0002504624,0.00019297976,0.00019757976,0.00002501941,0.00001029758,0.000057715122,0.00001830297,0.000026780675,0.98295736,0.0012847916,0.014884038,0.00009464613],"about_ca_topic_score_codex":0.00047353364,"about_ca_topic_score_gemma":0.00000786978,"teacher_disagreement_score":0.39010403,"about_ca_system_score_codex":0.000045976907,"about_ca_system_score_gemma":0.00006283704,"threshold_uncertainty_score":0.9855027},"labels":[],"label_agreement":null},{"id":"W4399754529","doi":"10.1007/978-1-0716-3898-9_2","title":"In Silico Typing and Identification Confirmation of Isolates","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Silicon Effects in Agriculture","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; University of Saskatchewan","funders":"","keywords":"In silico; Typing; Identification (biology); Computational biology; Biology; Microbiology; Genetics; Gene","score_opus":0.01650246479421002,"score_gpt":0.3570303034624702,"score_spread":0.3405278386682602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399754529","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98675174,0.0029303294,0.009101829,0.0006948652,0.0001854483,0.00017432915,0.000004462999,0.000021766387,0.00013523146],"genre_scores_gemma":[0.9831393,0.00007367185,0.016590843,0.000104117134,0.00002774205,0.00002204549,0.000017860079,7.3250584e-7,0.000023696579],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884945,0.0005739819,0.0002254041,0.00021775614,0.000022955839,0.00011046488],"domain_scores_gemma":[0.9994185,0.0004738345,0.000040097024,0.00003538108,0.000017144546,0.000015060592],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089554104,0.00007256238,0.00013886433,0.000040028397,0.000012479263,0.000016996248,0.00008832412,0.00013804383,0.000034405395],"category_scores_gemma":[0.00022449446,0.000029543316,0.000028539946,0.0004109292,0.000059344868,0.000047866088,0.000038582697,0.000108829976,0.0000027169654],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000003220847,0.000009827498,0.0017657403,0.000017856342,0.0000036862114,0.000001665523,0.00008571953,0.0000058266855,0.9177755,0.005014381,0.0000066048437,0.07530996],"study_design_scores_gemma":[0.00010577626,0.00012260217,0.07492776,0.00008285098,0.00000884347,0.00001731132,0.00018657852,0.0033610354,0.89186645,0.02623891,0.0029133079,0.00016855058],"about_ca_topic_score_codex":0.000093011695,"about_ca_topic_score_gemma":0.00005637584,"teacher_disagreement_score":0.07514141,"about_ca_system_score_codex":0.000013813644,"about_ca_system_score_gemma":0.0000027460867,"threshold_uncertainty_score":0.120474145},"labels":[],"label_agreement":null},{"id":"W4399780102","doi":"10.1007/978-1-0716-3890-3_20","title":"Evaluating Cationic Nanoparticles as Carriers of Antiviral Nucleic Acids","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Immunology Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Nucleic acid; Cationic polymerization; Nanoparticle; Chemistry; Virology; Nanotechnology; Materials science; Biology; Biochemistry; Polymer chemistry","score_opus":0.07108285992868045,"score_gpt":0.526345261931088,"score_spread":0.45526240200240753,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780102","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93268186,0.0050569004,0.0591653,0.0004550242,0.00022289298,0.00021251202,0.000002060284,0.000036184912,0.0021672533],"genre_scores_gemma":[0.76627326,0.00011177732,0.2332631,0.000085123655,0.000016399199,0.000032578133,0.0000072426224,0.000014351742,0.0001961363],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99826086,0.00094063336,0.00026078644,0.00024053002,0.000066269364,0.00023089693],"domain_scores_gemma":[0.9994837,0.00016133428,0.000027376984,0.00022977745,0.00006906408,0.000028749204],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016705,0.00008518411,0.00024017805,0.00028699264,0.000034377586,0.000008574008,0.00007257914,0.0001438497,0.00012364029],"category_scores_gemma":[0.0010115609,0.00007186563,0.00008691088,0.00053929904,0.00028395103,0.000028018638,0.0000660483,0.0002819218,0.000024728695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003253104,0.000029664616,0.0051968526,0.000038311515,0.000071207985,0.000022025177,0.00011643447,0.0000071741406,0.8652465,0.006637592,0.0000042492316,0.12259749],"study_design_scores_gemma":[0.00041980477,0.0012071003,0.0023457836,0.00008962201,0.000052162766,0.000057242305,0.00012902527,0.0032575512,0.9822,0.009015437,0.0011443949,0.00008185611],"about_ca_topic_score_codex":0.00010606654,"about_ca_topic_score_gemma":0.0000030766657,"teacher_disagreement_score":0.1740978,"about_ca_system_score_codex":0.000045915538,"about_ca_system_score_gemma":0.00019203422,"threshold_uncertainty_score":0.29305953},"labels":[],"label_agreement":null},{"id":"W4399780104","doi":"10.1007/978-1-0716-3890-3_12","title":"Quantification of Mycobacterium tuberculosis Growth in Cell-Based Infection Assays by Time-Lapse Fluorescence Microscopy","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Saskatchewan Health Authority","funders":"","keywords":"Mycobacterium tuberculosis; Fluorescence microscope; Tuberculosis; Microscopy; Microbiology; Fluorescence; Biology; Virology; Pathology; Medicine; Optics","score_opus":0.021336267664704114,"score_gpt":0.40101472471886623,"score_spread":0.37967845705416214,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780104","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.37655094,0.002617619,0.61693674,0.0024770624,0.0002861297,0.0005509509,0.00003438335,0.00006372527,0.0004824544],"genre_scores_gemma":[0.5709527,0.00089585234,0.42681578,0.0006106907,0.000044116718,0.00015881553,0.00039962635,0.000049462866,0.000072911374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954698,0.0027801464,0.0006151332,0.0005825144,0.000101416335,0.00045095207],"domain_scores_gemma":[0.9986054,0.00078671833,0.00007673168,0.00033684852,0.000094933224,0.00009937304],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032012565,0.00019962215,0.00056911743,0.0006612558,0.000018797955,0.000010592662,0.00012440047,0.0004086073,0.00008650586],"category_scores_gemma":[0.0018405599,0.00017758796,0.0001478185,0.00085490453,0.00022457376,0.00003982411,0.00005365813,0.0005110305,0.000038293434],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013926499,0.00019498383,0.053858604,0.00036156745,0.000031560274,0.000026656153,0.000030286023,0.000024192394,0.94071877,0.00025652684,0.0005731799,0.003784409],"study_design_scores_gemma":[0.0005472128,0.00043987052,0.011719587,0.00014656251,0.00003598562,0.000013232316,0.000004716087,0.0108900005,0.97413045,0.00078917795,0.0011355747,0.00014765764],"about_ca_topic_score_codex":0.0010682202,"about_ca_topic_score_gemma":0.000014521391,"teacher_disagreement_score":0.19440179,"about_ca_system_score_codex":0.00015707518,"about_ca_system_score_gemma":0.00013725307,"threshold_uncertainty_score":0.7241827},"labels":[],"label_agreement":null},{"id":"W4399780106","doi":"10.1007/978-1-0716-3890-3_1","title":"Intracellular Pathogens: Infection, Immunity, and Intervention","year":2024,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Immunity; Intracellular; Intracellular parasite; Immunology; Microbiology; Biology; Medicine; Immune system; Cell biology","score_opus":0.06130119972685409,"score_gpt":0.4904554978806034,"score_spread":0.4291542981537493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780106","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008392514,0.8666388,0.13163747,0.000013609287,0.0005028582,0.0006318804,0.000013985894,0.000056858404,0.0004206286],"genre_scores_gemma":[0.000006423878,0.89178663,0.10749869,0.000027109789,0.00004981332,0.00022709597,0.00016747683,0.000054580825,0.00018218713],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9965227,0.0020877419,0.0006252919,0.00048429525,0.000045838475,0.0002340874],"domain_scores_gemma":[0.9992346,0.0001267482,0.00012989205,0.00040011783,0.00003783261,0.00007077799],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013305733,0.00036372867,0.0013278525,0.0006893421,0.000039757746,0.000022818263,0.000058474245,0.00066626107,0.00006854633],"category_scores_gemma":[0.00031418883,0.00027124,0.0005048932,0.0005318112,0.000115858915,0.000015532662,0.00018689888,0.00079216866,0.000060735394],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000030494657,0.00014229558,0.00006639155,0.005771018,0.0005228028,0.00021146212,0.00001579461,4.492051e-8,0.00016868755,0.0009288873,0.000007939116,0.99216163],"study_design_scores_gemma":[0.00029780556,0.0002490217,0.000009514419,0.0056038154,0.0024794792,0.0006391004,0.000003847178,0.000008649428,0.0001463132,0.002342006,0.9880188,0.00020161924],"about_ca_topic_score_codex":0.00020831375,"about_ca_topic_score_gemma":0.0000145927615,"teacher_disagreement_score":0.99196,"about_ca_system_score_codex":0.00017013289,"about_ca_system_score_gemma":0.00009277382,"threshold_uncertainty_score":0.99997395},"labels":[],"label_agreement":null},{"id":"W4399780115","doi":"10.1007/978-1-0716-3890-3_15","title":"Bacteriophages Isolation and Efficacy Testing","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph; Agriculture and Agri-Food Canada","funders":"","keywords":"Isolation (microbiology); Computational biology; Biology; Microbiology","score_opus":0.02315268071822069,"score_gpt":0.3796902261669597,"score_spread":0.356537545448739,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780115","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5027257,0.00032232236,0.49398234,0.00015876116,0.000290973,0.00008812144,0.0000021941776,0.000041327276,0.0023882391],"genre_scores_gemma":[0.24004635,0.00001670796,0.7595668,0.00015168944,0.000019378205,0.000008164019,0.000004053534,0.000010476482,0.00017639126],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.999236,0.0002315855,0.0001276918,0.00025027918,0.000015823074,0.00013862361],"domain_scores_gemma":[0.99965537,0.0002093517,0.000017301132,0.000089565096,0.0000022651498,0.00002614283],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003203825,0.00007785483,0.00008959161,0.000048223446,0.000030784253,0.000033926175,0.000058412807,0.00006845345,0.00038327064],"category_scores_gemma":[0.00014937065,0.00006967299,0.000023502213,0.00019783292,0.000087368906,0.000059073656,0.0001170257,0.00013011103,0.000051985786],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000017975533,0.0000076236806,0.00085074676,0.0000036382041,0.0000033516421,0.000014134599,0.000056031873,0.0000132125,0.82612205,0.000108898894,0.000008744281,0.17280975],"study_design_scores_gemma":[0.0005376037,0.0003548554,0.43995985,0.00013919764,0.00005252669,0.0004299427,0.000051199495,0.013235603,0.45565623,0.0060745548,0.08285552,0.00065291964],"about_ca_topic_score_codex":0.00014544236,"about_ca_topic_score_gemma":0.000015752183,"teacher_disagreement_score":0.43910912,"about_ca_system_score_codex":0.000035913272,"about_ca_system_score_gemma":0.000003478057,"threshold_uncertainty_score":0.4196545},"labels":[],"label_agreement":null},{"id":"W4399780122","doi":"10.1007/978-1-0716-3890-3_13","title":"Intravital Microscopy for Imaging and Live Cell Tracking of Alveolar Macrophages in Real Time","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Intravital microscopy; Live cell imaging; Microscopy; Tracking (education); Cell biology; Cell; Pathology; Chemistry; Biology; Medicine; Psychology; Radiology","score_opus":0.009573855868494614,"score_gpt":0.36624107024275193,"score_spread":0.3566672143742573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780122","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6279313,0.11053631,0.2585621,0.00013614396,0.0014936258,0.0006480488,0.000098901844,0.000055142693,0.0005384505],"genre_scores_gemma":[0.46974394,0.00090458605,0.5285121,0.00014485673,0.000027493272,0.00009015515,0.00010014016,0.00006478434,0.0004119424],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99784064,0.0008652691,0.0004072431,0.00045099185,0.000011865512,0.00042398067],"domain_scores_gemma":[0.99899423,0.00069411733,0.00007098899,0.0001987037,0.00003194716,0.000010035156],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013714181,0.000186326,0.00041643606,0.00028113346,0.000030052071,0.000011518945,0.00018709156,0.00029660188,0.000096923985],"category_scores_gemma":[0.00013511986,0.00018295272,0.00008923554,0.00016416819,0.0003368228,0.000037044218,0.00013979252,0.0003502937,0.000014536555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000103467166,0.00004348653,0.001448301,0.00013055725,0.000045226334,0.000030405625,0.0009171553,0.000003629482,0.9753619,0.00050763605,0.000046988363,0.021361269],"study_design_scores_gemma":[0.000877497,0.00016373926,0.00037764112,0.00009099168,0.000030321351,0.00003762824,0.0001840586,0.00012513743,0.9919957,0.0029832383,0.0029573988,0.00017668214],"about_ca_topic_score_codex":0.000113913884,"about_ca_topic_score_gemma":0.0000065331815,"teacher_disagreement_score":0.26995003,"about_ca_system_score_codex":0.00005428393,"about_ca_system_score_gemma":0.000056708992,"threshold_uncertainty_score":0.74605954},"labels":[],"label_agreement":null},{"id":"W4399780134","doi":"10.1007/978-1-0716-3890-3_4","title":"Large-Scale Culture and Plasmid Preparation Procedure for Low-Yield Bacmids Containing Full-Length SARS-CoV-2 cDNAs","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Biomedical and Engineering Education","field":"Engineering","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Plasmid; Coronavirus disease 2019 (COVID-19); Virology; Yield (engineering); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Biology; Medicine; Genetics; Materials science; Gene; Internal medicine","score_opus":0.01670457725289047,"score_gpt":0.35806507340309346,"score_spread":0.341360496150203,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780134","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0884025,0.0029770145,0.9068482,0.00020849078,0.00081372814,0.00024474066,0.0000151200875,0.0002125586,0.00027765223],"genre_scores_gemma":[0.29224402,0.00018425255,0.7065926,0.00024361655,0.0002138808,0.00030293546,0.00010875238,0.000053843763,0.00005604436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99916846,0.00005795413,0.0002004395,0.00027330924,0.000039059927,0.00026080201],"domain_scores_gemma":[0.9996978,0.00012333991,0.000011635642,0.00011191838,0.000018077477,0.000037238955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047484768,0.00015376025,0.00019092494,0.00011151431,0.00002499289,0.000027022092,0.00007697059,0.00031010533,0.000004894235],"category_scores_gemma":[0.00018471407,0.00013544806,0.000045862573,0.0001896783,0.000035487155,0.000047586836,0.000024325254,0.00024442273,0.0000024581518],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018350054,0.000013945719,0.000032711592,0.000684435,0.00003961975,0.0000028535308,0.0012965949,0.00037119075,0.9880557,0.0039015706,0.0005973966,0.0049856254],"study_design_scores_gemma":[0.0003881863,0.00031772512,0.00005780744,0.00027509165,0.000038099886,0.000038094422,0.00020544567,0.34099925,0.57086736,0.0063914764,0.0800294,0.00039206893],"about_ca_topic_score_codex":0.000003172653,"about_ca_topic_score_gemma":0.000014385476,"teacher_disagreement_score":0.41718835,"about_ca_system_score_codex":0.000042380583,"about_ca_system_score_gemma":0.000023159595,"threshold_uncertainty_score":0.55234116},"labels":[],"label_agreement":null},{"id":"W4399780135","doi":"10.1007/978-1-0716-3890-3_16","title":"Production, Isolation, and Detection of Poly IC in Extracellular Vesicles from U937 Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Extracellular vesicles; Isolation (microbiology); Extracellular; Chemistry; U937 cell; Cell biology; Biophysics; Biochemistry; Biology; Microbiology; In vitro","score_opus":0.01088085366281962,"score_gpt":0.32299307731055427,"score_spread":0.31211222364773467,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780135","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.493797,0.044084102,0.46155277,0.00006404243,0.00028529254,0.00016454064,0.000012048333,0.000012454311,0.000027755357],"genre_scores_gemma":[0.7752634,0.00037976136,0.224037,0.000036209476,0.00009552765,0.00003210917,0.000054108594,0.000033157216,0.0000686711],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99762464,0.0008833311,0.00047006336,0.0007066471,0.00006885721,0.00024646017],"domain_scores_gemma":[0.99932337,0.00007415817,0.00008449966,0.0004168094,0.0000439097,0.000057253306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096322113,0.00019827962,0.00024089323,0.00024149094,0.000023862342,0.000016992382,0.00015994397,0.00030824894,0.00001248792],"category_scores_gemma":[0.00035897412,0.00020890859,0.00008030761,0.00033108072,0.00021148614,0.000008024476,0.00011668327,0.0001960374,0.0000027536082],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006152607,0.00005908447,0.0023541204,0.000049436007,0.000036203317,0.000021006153,0.00009337369,0.000060712275,0.9565967,0.0002833571,0.000008644638,0.040375866],"study_design_scores_gemma":[0.00024694094,0.00011969674,0.0015395891,0.000041260937,0.000025758602,0.000009838464,0.00005662966,0.0008776075,0.98716,0.0076404153,0.0020813379,0.00020091156],"about_ca_topic_score_codex":0.00010222204,"about_ca_topic_score_gemma":0.000056037563,"teacher_disagreement_score":0.28146645,"about_ca_system_score_codex":0.00002597434,"about_ca_system_score_gemma":0.000060230188,"threshold_uncertainty_score":0.8519045},"labels":[],"label_agreement":null},{"id":"W4399780149","doi":"10.1007/978-1-0716-3890-3_21","title":"RNA-Based Vaccines and Therapeutics Against Intracellular Pathogens","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Intracellular; Virology; Medicine; Biology; Genetics","score_opus":0.02010548875718308,"score_gpt":0.3572111391266215,"score_spread":0.3371056503694384,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780149","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43035313,0.016649589,0.55198014,0.00027545934,0.00028714957,0.00012025419,0.000011953826,0.000021220763,0.00030112537],"genre_scores_gemma":[0.6554871,0.001937949,0.33935332,0.0025953867,0.00017737657,0.00005733359,0.00015319642,0.000060000923,0.00017828701],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99830556,0.0005298761,0.00026294452,0.000554241,0.000045715584,0.00030166886],"domain_scores_gemma":[0.999468,0.000059901562,0.000034680277,0.00033875773,0.000044208875,0.000054411328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006405252,0.00021989956,0.00021411305,0.00015111541,0.000031987132,0.00003682051,0.00019127036,0.00031808988,0.000013422036],"category_scores_gemma":[0.00008288883,0.00019374209,0.00010490808,0.00016556593,0.000105261766,0.0000025553163,0.00010837032,0.00018373609,0.000006232499],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028967877,0.000022179209,0.00078843406,0.000025659729,0.000061207975,0.000052463274,0.000029928464,0.00006914349,0.909728,0.00035036093,0.00003523451,0.08880841],"study_design_scores_gemma":[0.0002559751,0.00029731158,0.00013596179,0.000030716503,0.000028917733,0.000015742988,0.000038353464,0.0031806675,0.9622986,0.0014399267,0.032016784,0.00026104753],"about_ca_topic_score_codex":0.000007651052,"about_ca_topic_score_gemma":0.000009141217,"teacher_disagreement_score":0.225134,"about_ca_system_score_codex":0.000012328465,"about_ca_system_score_gemma":0.00007034139,"threshold_uncertainty_score":0.7900573},"labels":[],"label_agreement":null},{"id":"W4399780153","doi":"10.1007/978-1-0716-3890-3_9","title":"Applications of Quantitative PCR (qPCR) in Studies of Virus-Host Interactions","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Waterloo; University of British Columbia; University of Saskatchewan","funders":"","keywords":"Host (biology); Biology; Virology; Computational biology; Genetics","score_opus":0.04689962891622042,"score_gpt":0.4937864616961692,"score_spread":0.4468868327799488,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780153","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.051089767,0.0119688315,0.935242,0.00020115268,0.000091415764,0.00048681637,0.00006468745,0.00001807143,0.0008372673],"genre_scores_gemma":[0.28297603,0.0016536776,0.7142839,0.000120168115,0.000025127081,0.0007133369,0.000110335124,0.000029174787,0.000088258654],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981203,0.0005593713,0.0005928919,0.00047890676,0.00004489764,0.00020365421],"domain_scores_gemma":[0.9991015,0.00018231399,0.00012951302,0.00044560753,0.00011303273,0.00002804103],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008410954,0.00017256195,0.00036910383,0.00035043425,0.000020978467,0.0000038725957,0.00026543092,0.00021477783,0.000013033797],"category_scores_gemma":[0.00028728181,0.00016262701,0.00014524926,0.0006005834,0.00041989953,0.0000032682335,0.00018980155,0.00020150974,0.000002213722],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002439539,0.00009717311,0.0005157851,0.00006625004,0.00010150906,0.0000030291228,0.000097252116,0.000023460834,0.9393291,0.0515157,0.00004634731,0.008180022],"study_design_scores_gemma":[0.0001575733,0.0002555021,0.00018097805,0.00006697756,0.000024418903,0.00000975803,0.00022451144,0.00014999179,0.95604336,0.013325904,0.029402018,0.00015897714],"about_ca_topic_score_codex":0.00007559763,"about_ca_topic_score_gemma":0.00014177384,"teacher_disagreement_score":0.23188625,"about_ca_system_score_codex":0.000024401646,"about_ca_system_score_gemma":0.000069877344,"threshold_uncertainty_score":0.66317374},"labels":[],"label_agreement":null},{"id":"W4399780159","doi":"10.1007/978-1-0716-3890-3_10","title":"Establishing Air-Liquid Interface (ALI) Airway Culture Models for Infectious Disease Research","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Inhalation and Respiratory Drug Delivery","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Health Authority; University of Saskatchewan","funders":"","keywords":"Infectious disease (medical specialty); Liquid culture; Airway; Medicine; Microbiology; Virology; Disease; Biology; Pathology; Surgery","score_opus":0.06955195790997969,"score_gpt":0.4890070363010567,"score_spread":0.419455078391077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780159","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.021298788,0.00772615,0.96455705,0.0011456,0.000685744,0.0007373959,0.000018428444,0.0001240166,0.0037068296],"genre_scores_gemma":[0.49948093,0.000322066,0.49221876,0.0029518625,0.00057675876,0.00053293357,0.0001237277,0.00013265599,0.003660301],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971914,0.0014203605,0.00031244048,0.0005233555,0.00014113051,0.00041130625],"domain_scores_gemma":[0.99876356,0.00048543556,0.000028114206,0.00032619742,0.00023592869,0.00016078896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0029861853,0.00016552715,0.00029290654,0.00051176857,0.00008520648,0.000036626967,0.00013833838,0.00028362518,0.000036936246],"category_scores_gemma":[0.0014738993,0.00012990733,0.00016444773,0.00056897086,0.0001741443,0.0000961049,0.00012475424,0.00068247376,0.000014607296],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008908181,0.00018810086,0.00010174962,0.0007476501,0.00015305978,0.0003720371,0.0014755675,0.0072826985,0.91125524,0.04300113,0.0025996005,0.031932347],"study_design_scores_gemma":[0.0025721649,0.0023047703,0.00001959046,0.0009399614,0.00019768512,0.000097169475,0.0005206052,0.1728842,0.48770583,0.038751025,0.2932997,0.0007072852],"about_ca_topic_score_codex":0.000024507473,"about_ca_topic_score_gemma":0.000003969228,"teacher_disagreement_score":0.47818214,"about_ca_system_score_codex":0.00015347534,"about_ca_system_score_gemma":0.00022114153,"threshold_uncertainty_score":0.5297468},"labels":[],"label_agreement":null},{"id":"W4399780171","doi":"10.1007/978-1-0716-3890-3_8","title":"Median Tissue Culture Infectious Dose 50 (TCID50) Assay to Determine Infectivity of Cytopathic Viruses","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University of Waterloo; University of British Columbia; University of Saskatchewan","funders":"","keywords":"Infectivity; Virology; Cytopathic effect; Infectious dose; Tissue culture; Biology; Microbiology; Virus; In vitro; Genetics","score_opus":0.04570729346642039,"score_gpt":0.4740806431502827,"score_spread":0.4283733496838623,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780171","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.27109537,0.0017486194,0.7244076,0.0009841466,0.00042391755,0.0005002282,0.000023765906,0.00007845831,0.00073787756],"genre_scores_gemma":[0.61843276,0.00023499076,0.37925017,0.0016707013,0.00014715895,0.000120497025,0.000023935481,0.000034152832,0.00008563796],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99509615,0.0032087758,0.00049006246,0.0005305546,0.000112881506,0.0005615739],"domain_scores_gemma":[0.9989256,0.0003114682,0.000055094497,0.00037506537,0.000084569845,0.0002482016],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0032408233,0.00022881803,0.00079110137,0.0005360554,0.00002452017,0.000010729576,0.00015490245,0.00036313894,0.00009490232],"category_scores_gemma":[0.0070701805,0.00018218403,0.00015365114,0.0005462817,0.00024211252,0.000035843972,0.00020351956,0.00066108507,0.000031794603],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011334255,0.0000807465,0.030813584,0.0001592088,0.000060537026,0.0004754122,0.000119174074,0.000010952507,0.8394767,0.00035066844,0.0001237106,0.12821595],"study_design_scores_gemma":[0.0024386935,0.0121973585,0.033445537,0.0008090144,0.0001471481,0.0018492929,0.000057480087,0.0011773151,0.8205602,0.017448124,0.109260365,0.0006094267],"about_ca_topic_score_codex":0.00039500426,"about_ca_topic_score_gemma":0.00024838749,"teacher_disagreement_score":0.3473374,"about_ca_system_score_codex":0.000106052474,"about_ca_system_score_gemma":0.000103890474,"threshold_uncertainty_score":0.8464177},"labels":[],"label_agreement":null},{"id":"W4399780174","doi":"10.1007/978-1-0716-3890-3_14","title":"Recent Advancements in Radiopharmaceuticals for Infection Imaging","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Radiopharmaceutical Chemistry and Applications","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Medicine","score_opus":0.06710490719393365,"score_gpt":0.5511693517654932,"score_spread":0.48406444457155956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780174","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017862324,0.009191474,0.9670891,0.003512883,0.00025121617,0.0006191767,0.0000058080736,0.000056121276,0.0014118673],"genre_scores_gemma":[0.08384125,0.0032400114,0.9094904,0.002138731,0.00015133161,0.0008787006,0.00007486446,0.00003745667,0.00014726765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989574,0.00016711949,0.0002659069,0.00032851324,0.000036713845,0.0002443798],"domain_scores_gemma":[0.99952555,0.0002273473,0.000016868787,0.00013784417,0.000024158953,0.00006825932],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008153348,0.00010321251,0.00019870141,0.00012837819,0.000016336302,0.000007978016,0.00004698298,0.000081784514,0.00007508487],"category_scores_gemma":[0.00033443407,0.0000966,0.000063063875,0.00039450766,0.00006601627,0.000021003358,0.000022864586,0.0002571189,0.0000048416973],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043962144,0.000056831686,0.0019829515,0.000101322024,0.000014518032,0.00002462865,0.000011170741,0.00001923253,0.69843704,0.002264286,0.00002103027,0.29702306],"study_design_scores_gemma":[0.00089114177,0.00003388649,0.00029584867,0.00006759332,0.000040983,0.00004315793,0.0000049114055,0.014053262,0.61973464,0.0094863,0.355247,0.000101273705],"about_ca_topic_score_codex":0.000002882661,"about_ca_topic_score_gemma":3.1572347e-7,"teacher_disagreement_score":0.35522595,"about_ca_system_score_codex":0.00012763421,"about_ca_system_score_gemma":0.00004040392,"threshold_uncertainty_score":0.39392337},"labels":[],"label_agreement":null},{"id":"W4399780188","doi":"10.1007/978-1-0716-3890-3_7","title":"Quantitative Proteomics of the Intracellular Bacterial Pathogen Salmonella enterica Serovar Typhimurium","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Regina; University of Guelph; Artificial Intelligence in Medicine (Canada)","funders":"","keywords":"Salmonella enterica; Serotype; Salmonella; Microbiology; Pathogen; Biology; Proteomics; Foodborne pathogen; Bacteria; Genetics; Gene; Listeria monocytogenes","score_opus":0.015548077926751367,"score_gpt":0.3499304970637572,"score_spread":0.3343824191370058,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399780188","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5524722,0.00017461104,0.44488925,0.0003380511,0.0010271625,0.0003168202,0.00003773665,0.000016719143,0.00072749855],"genre_scores_gemma":[0.1431671,0.000035845347,0.85633665,0.0001401099,0.000032765056,0.000037216738,0.000013538416,0.000024046953,0.00021272556],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984047,0.00079631107,0.00026976454,0.00029548057,0.000041182102,0.00019256747],"domain_scores_gemma":[0.9995558,0.00009228879,0.00006904241,0.00024992588,0.000007228955,0.00002567298],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005151799,0.00012292161,0.0001781685,0.000041827567,0.000031434465,0.000017257047,0.0002619377,0.000115836156,0.00070423476],"category_scores_gemma":[0.00010273027,0.0000882831,0.00011463263,0.00027934083,0.00025147514,0.000040381707,0.00029333544,0.0002140175,0.000047673046],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028126346,0.00003404316,0.00017201107,0.000011510075,0.000019077128,0.000011218536,0.00022258415,0.000038018952,0.99438804,0.0007121526,0.000033756984,0.004329449],"study_design_scores_gemma":[0.00010200021,0.0001280202,0.0016149777,0.000031026357,0.000019737894,0.000024518848,0.00003813664,0.0006868348,0.9756371,0.0020721229,0.019522022,0.00012354144],"about_ca_topic_score_codex":0.00018284509,"about_ca_topic_score_gemma":0.000025340296,"teacher_disagreement_score":0.4114474,"about_ca_system_score_codex":0.000070894566,"about_ca_system_score_gemma":0.000015825022,"threshold_uncertainty_score":0.7710877},"labels":[],"label_agreement":null},{"id":"W4399781072","doi":"10.1007/978-1-0716-3890-3_2","title":"Methods for Genomic Epidemiology of Bacterial Pathogens: Example Salmonella","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Agriculture and Agri-Food Canada","funders":"","keywords":"Salmonella; Biology; Microbiology; Epidemiology; Medicine; Genetics; Bacteria; Pathology","score_opus":0.10494809391825595,"score_gpt":0.4336812188802445,"score_spread":0.3287331249619886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399781072","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2986293,0.01095361,0.68774307,0.00049228565,0.0013365721,0.00049799855,0.00009442654,0.00007737595,0.00017533552],"genre_scores_gemma":[0.020506384,0.00028272852,0.9777678,0.0005767898,0.00035103917,0.0001894016,0.00026909477,0.0000074651384,0.00004928204],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9895209,0.0077487775,0.0010525524,0.0009226312,0.000032550877,0.000722566],"domain_scores_gemma":[0.9864449,0.012994698,0.00020049668,0.00019649546,0.000060375634,0.00010306637],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0100721745,0.00030816597,0.0010849781,0.00008812872,0.000051470346,0.000008027499,0.00048064545,0.0006067793,0.00028943084],"category_scores_gemma":[0.002603324,0.00014204171,0.00043654712,0.00043672873,0.00027398017,0.000029428827,0.00019164823,0.00025027982,0.000008967801],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059651218,0.00002510751,0.0036974163,0.000024896815,0.000043534375,0.0000041874196,0.00003730258,0.000006526364,0.6906087,0.011010555,0.000039108032,0.294443],"study_design_scores_gemma":[0.0005930833,0.0017846891,0.035721302,0.000074288226,0.00014372914,0.00011702871,0.00015376142,0.0030396008,0.21975034,0.44780946,0.28984654,0.0009661542],"about_ca_topic_score_codex":0.0003432286,"about_ca_topic_score_gemma":0.000045529832,"teacher_disagreement_score":0.47085834,"about_ca_system_score_codex":0.000048914095,"about_ca_system_score_gemma":0.000029411702,"threshold_uncertainty_score":0.5792293},"labels":[],"label_agreement":null},{"id":"W4399781078","doi":"10.1007/978-1-0716-3890-3_5","title":"Metatranscriptomic RNA-Seq Data Analysis of Virus-Infected Host Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; McMaster University Medical Centre; University of British Columbia; University of Toronto; McMaster University; University of Waterloo","funders":"","keywords":"Host (biology); Virology; Computational biology; RNA-Seq; Biology; Genetics; Gene; Transcriptome; Gene expression","score_opus":0.02902027164973615,"score_gpt":0.3919507769176425,"score_spread":0.3629305052679064,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399781078","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.146711,0.0005061101,0.850748,0.000091319744,0.0004801453,0.00010792117,0.00024505562,0.000028059736,0.0010823457],"genre_scores_gemma":[0.18063964,0.00020815265,0.8184153,0.00026726772,0.000014733509,0.000011291383,0.00020160762,0.000022240603,0.00021979489],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983818,0.0005892219,0.00030590539,0.00048167934,0.000040816678,0.00020055512],"domain_scores_gemma":[0.99917686,0.0001429896,0.00004957751,0.0005894028,0.0000048857232,0.000036264206],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0007167124,0.00012341602,0.00031847903,0.00024053783,0.000019534174,0.000017878725,0.000417636,0.00010662644,0.0026506481],"category_scores_gemma":[0.000053864784,0.000109056455,0.00015416415,0.0011867263,0.00016831675,0.000082336104,0.00028156108,0.00018370079,0.00005801054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006331757,0.000036536374,0.00019745628,0.0000064836763,0.00035803308,0.000014576987,0.00007633476,0.00017097441,0.9892284,0.00011962373,0.00007710739,0.0097080935],"study_design_scores_gemma":[0.00007824689,0.00003900418,0.0048693544,0.000008379346,0.00067895534,0.0000036780589,0.000011725636,0.006890728,0.9668485,0.00024256048,0.020183688,0.00014517555],"about_ca_topic_score_codex":0.0020563155,"about_ca_topic_score_gemma":0.0006959497,"teacher_disagreement_score":0.033928636,"about_ca_system_score_codex":0.000053724318,"about_ca_system_score_gemma":0.0000109830635,"threshold_uncertainty_score":0.99826103},"labels":[],"label_agreement":null},{"id":"W4399917106","doi":"10.1007/978-1-0716-3918-4_10","title":"Liquid and Solid Hybridization Methods to Detect RNAs","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MicroRNA in disease regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Computational biology; Materials science; Biology; Computer science","score_opus":0.01537739301520905,"score_gpt":0.4107496800554876,"score_spread":0.39537228704027855,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399917106","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08778736,0.0077595147,0.9032553,0.00022801578,0.00040696736,0.00028881044,0.000009435063,0.000035923273,0.00022866215],"genre_scores_gemma":[0.043208517,0.00016212527,0.9556932,0.0005090282,0.00015673901,0.00007959123,0.000067829926,0.00004856069,0.000074417745],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99723077,0.0014160473,0.0003124081,0.00068314373,0.000051206123,0.0003064337],"domain_scores_gemma":[0.9993378,0.00008066358,0.000041440588,0.00037355287,0.000052290387,0.00011424533],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015436283,0.00020865267,0.00022850597,0.00023999612,0.000035833396,0.00003258548,0.0001658005,0.0002616259,0.000020354424],"category_scores_gemma":[0.00076088513,0.00020757706,0.00008706674,0.00032384275,0.00009027177,0.0000037800048,0.00024183288,0.00012486344,0.0000071833842],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000618709,0.000008230267,0.000034316825,0.000032834567,0.000044705375,0.000008653996,0.000029092484,0.00014459169,0.9145547,0.0007382155,0.000077589146,0.084265195],"study_design_scores_gemma":[0.00014559546,0.00031492542,0.00018046152,0.00002684879,0.000025339286,0.000034425517,0.000007892776,0.0007446886,0.9446946,0.0032667,0.05032619,0.00023233153],"about_ca_topic_score_codex":0.000010890596,"about_ca_topic_score_gemma":0.000005551726,"teacher_disagreement_score":0.08403286,"about_ca_system_score_codex":0.000034221343,"about_ca_system_score_gemma":0.00007295304,"threshold_uncertainty_score":0.8464747},"labels":[],"label_agreement":null},{"id":"W4399917181","doi":"10.1007/978-1-0716-3918-4_7","title":"Detection of Foodborne RNA Viruses by Reverse Transcriptase Droplet Digital PCR","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Health Canada","funders":"","keywords":"Reverse transcriptase; Digital polymerase chain reaction; Virology; RNA; Biology; Computational biology; Polymerase chain reaction; Genetics; Gene","score_opus":0.04004333521001188,"score_gpt":0.42300375481849944,"score_spread":0.3829604196084876,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399917181","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18767576,0.004005146,0.8067788,0.0006264867,0.000238813,0.00021356581,0.00010760538,0.000040822506,0.0003130184],"genre_scores_gemma":[0.8534385,0.00037916066,0.14497998,0.0008785476,0.000051626477,0.000044924083,0.00008209562,0.000030089777,0.000115057854],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979652,0.00084145286,0.00039978776,0.00035361294,0.0000718583,0.00036808618],"domain_scores_gemma":[0.9995109,0.00009373701,0.000035070265,0.00021589088,0.00003454303,0.00010985784],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009234499,0.00013872332,0.00044313647,0.00024212177,0.000013602256,0.000009187327,0.00009597368,0.00018166905,0.00006188635],"category_scores_gemma":[0.0012167151,0.00011799355,0.00017059284,0.00027702958,0.00023787908,0.000044916436,0.000042275766,0.0003483562,0.000009326433],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002424983,0.000059550046,0.0011741852,0.00009802944,0.00007007097,0.00016368779,0.000022824894,0.0000012305768,0.90207165,0.00015886479,0.00044937528,0.09548806],"study_design_scores_gemma":[0.0011977027,0.0031182768,0.00044250087,0.00015327297,0.00005256404,0.00023832254,0.000062098465,0.0007478729,0.9038277,0.0036279901,0.08637263,0.00015906637],"about_ca_topic_score_codex":0.00011647346,"about_ca_topic_score_gemma":0.000007600598,"teacher_disagreement_score":0.6657628,"about_ca_system_score_codex":0.00004981239,"about_ca_system_score_gemma":0.000038010672,"threshold_uncertainty_score":0.48116374},"labels":[],"label_agreement":null},{"id":"W4399917233","doi":"10.1007/978-1-0716-3918-4","title":"RNA Amplification and Analysis","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Medical Sciences, Newcastle University; Health Canada; Directorate for Biological Sciences; Northwestern Polytechnical University; Fakultet Medicinskih Nauka, Univerziteta U Kragujevcu; Northwestern University; China University of Mining and Technology; Sichuan University; University of British Columbia; Newcastle University; University of Ottawa; Universidade Nova de Lisboa; Johns Hopkins University","keywords":"Biology","score_opus":0.017855426701423704,"score_gpt":0.4021426744337616,"score_spread":0.3842872477323379,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399917233","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025379477,0.011082745,0.93142533,0.00023208726,0.000110441535,0.00048430837,0.000117395415,0.000051619772,0.056242246],"genre_scores_gemma":[0.00062702724,0.0026957574,0.8577727,0.0010096057,0.00019901752,0.00049215485,0.005118916,0.00014579883,0.13193901],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972964,0.0004940706,0.0005153801,0.0012792912,0.00006838292,0.00034649487],"domain_scores_gemma":[0.9986418,0.000047308084,0.00018049782,0.00096991594,0.000068948044,0.00009151921],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009266338,0.00043492703,0.0006080914,0.0005817223,0.000045215467,0.000030626896,0.00038131507,0.0014108627,0.000031408537],"category_scores_gemma":[0.00011254268,0.0004286525,0.00035111385,0.00037513138,0.00033718976,0.000001109387,0.00041722137,0.0004872033,0.000013626645],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016082602,0.000027839791,0.00013015154,0.00005352762,0.0009055552,0.000015532354,0.000012925771,0.000009734623,0.9167995,0.05605257,0.0026356105,0.023340967],"study_design_scores_gemma":[0.00020743815,0.0002559733,0.00010660472,0.00003954136,0.0010720567,0.000031684707,0.000005345928,0.00020316975,0.11397815,0.103430614,0.7798413,0.0008280955],"about_ca_topic_score_codex":0.0000137853785,"about_ca_topic_score_gemma":0.000023443923,"teacher_disagreement_score":0.80282134,"about_ca_system_score_codex":0.00005114311,"about_ca_system_score_gemma":0.00014888713,"threshold_uncertainty_score":0.9998855},"labels":[],"label_agreement":null},{"id":"W4399983759","doi":"10.1007/978-1-0716-3946-7_18","title":"Evaluating Chromosome Instability and Genotoxicity Through Single Cell Quantitative Imaging Microscopy","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Research Institute in Oncology and Hematology; CancerCare Manitoba","funders":"","keywords":"Genotoxicity; Instability; Chromosome instability; Microscopy; Genome instability; Chromosome; Biology; Biophysics; Cell biology; Genetics; Chemistry; DNA; Medicine; Pathology; Physics; DNA damage; Gene","score_opus":0.050421544791635006,"score_gpt":0.4787774842647376,"score_spread":0.4283559394731026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399983759","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3355122,0.009315202,0.6537411,0.00019854064,0.00009467344,0.0003536723,0.0000262014,0.00004521798,0.0007131528],"genre_scores_gemma":[0.23047173,0.00023144526,0.76842934,0.0005095769,0.000034397897,0.00015277446,0.00010226865,0.000036723868,0.000031721247],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970631,0.0010634913,0.00040541618,0.001001997,0.000061138715,0.00040483128],"domain_scores_gemma":[0.9991774,0.00011468322,0.00007977839,0.0005030112,0.00006615069,0.00005898272],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013747715,0.0002791938,0.00029629713,0.000096988195,0.000089452114,0.0000432795,0.00024454034,0.0002986838,0.000017897863],"category_scores_gemma":[0.00029520193,0.00026904928,0.000117693075,0.00027404795,0.00043845814,0.0000070323536,0.00033603408,0.00027845026,0.0000037810369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021588497,0.00007236569,0.00071235956,0.000050910905,0.000025184321,0.000010731245,0.00009226501,0.000012724505,0.98455083,0.0046248776,0.000026094494,0.0098000895],"study_design_scores_gemma":[0.00022565112,0.00041196463,0.000114649876,0.000025604933,0.00002340384,0.00003574663,0.00005298715,0.0010628047,0.97353745,0.014424639,0.009786977,0.00029815032],"about_ca_topic_score_codex":0.00005815338,"about_ca_topic_score_gemma":0.000012356438,"teacher_disagreement_score":0.11468821,"about_ca_system_score_codex":0.00004448784,"about_ca_system_score_gemma":0.000084801686,"threshold_uncertainty_score":0.99997616},"labels":[],"label_agreement":null},{"id":"W4399983783","doi":"10.1007/978-1-0716-3946-7_17","title":"Single-Cell MTT: A Simple and Sensitive Assay for Determining the Viability and Metabolic Activity of Polyploid Giant Cancer Cells (PGCCs)","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Alberta Biodiversity Monitoring Institute","funders":"","keywords":"Polyploid; Cancer cell; MTT assay; Viability assay; Cancer; Simple (philosophy); Biology; Chemistry; Cell; Botany; Biochemistry; Genetics; Ploidy; Gene","score_opus":0.020267907598574886,"score_gpt":0.35130075658369003,"score_spread":0.33103284898511515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4399983783","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6673796,0.0143829165,0.3169148,0.00011428027,0.0005122367,0.00045767677,0.00014348772,0.000008763994,0.000086242646],"genre_scores_gemma":[0.87061936,0.0020213705,0.12635346,0.0002689107,0.0003592151,0.00017382241,0.00002664097,0.00005296815,0.00012423321],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978101,0.0009637231,0.00025354073,0.00059815956,0.000054681834,0.0003197711],"domain_scores_gemma":[0.9990941,0.0003662663,0.00009313534,0.00030408415,0.000079165184,0.000063236155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015044021,0.00022288888,0.00041171993,0.00008088625,0.000055138335,0.000022701695,0.00011742554,0.00024386145,0.0000040148343],"category_scores_gemma":[0.00033077097,0.00017113364,0.00012921107,0.0001389188,0.00034957795,0.000005086349,0.00018965478,0.00016102756,1.2009336e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007394677,0.00003998145,0.00026862114,0.00007846928,0.00006505629,6.474344e-7,0.00013396202,0.000008475122,0.87906545,0.00014982864,0.0000294123,0.120086156],"study_design_scores_gemma":[0.00047542178,0.00018054512,0.0011424447,0.000011831522,0.000105463994,0.000007127053,0.00004505174,0.00066688156,0.9480111,0.00062958355,0.048536297,0.00018826762],"about_ca_topic_score_codex":0.00017773116,"about_ca_topic_score_gemma":0.00012858302,"teacher_disagreement_score":0.2032398,"about_ca_system_score_codex":0.000014189806,"about_ca_system_score_gemma":0.00009866509,"threshold_uncertainty_score":0.69786274},"labels":[],"label_agreement":null},{"id":"W4400038614","doi":"10.1007/978-1-0716-3878-1_7","title":"Recombinant Protein Production from Stable CHO Cell Pools","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Chinese hamster ovary cell; Recombinant DNA; Production (economics); Chemistry; Biochemistry; Gene; Receptor; Economics","score_opus":0.013778709909212573,"score_gpt":0.35399196347498096,"score_spread":0.34021325356576837,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400038614","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42222652,0.011599407,0.5603418,0.00033019614,0.0024911559,0.00088577345,0.000038035454,0.000078300196,0.00200885],"genre_scores_gemma":[0.5881686,0.00055661454,0.40415445,0.00051886996,0.00068054226,0.0009280058,0.00046906614,0.000116100746,0.004407724],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975926,0.00083020405,0.00031024753,0.0008319145,0.00006823395,0.00036679115],"domain_scores_gemma":[0.9992908,0.000021324342,0.000059499762,0.00049933454,0.0000458532,0.00008317861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058722415,0.00022873664,0.00022108796,0.000121641664,0.000059075213,0.00004668392,0.00020413884,0.00031068653,0.00010693577],"category_scores_gemma":[0.00025413843,0.00020355356,0.00014769367,0.00023912062,0.000081393155,0.000005810778,0.00017185857,0.0002280311,0.000026233318],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049652346,0.00009264049,0.00031021467,0.000038721897,0.000036249807,0.00001952919,0.00002271251,0.00011412066,0.9813999,0.00031461846,0.0014228659,0.016178792],"study_design_scores_gemma":[0.00021826057,0.0002387042,0.000066904504,0.000054772623,0.000015465948,0.00000638232,0.000018496643,0.0001259637,0.89969265,0.011218841,0.088100225,0.00024331143],"about_ca_topic_score_codex":0.00017013683,"about_ca_topic_score_gemma":0.000014853917,"teacher_disagreement_score":0.16594212,"about_ca_system_score_codex":0.000037440746,"about_ca_system_score_gemma":0.00010930463,"threshold_uncertainty_score":0.83006734},"labels":[],"label_agreement":null},{"id":"W4400038698","doi":"10.1007/978-1-0716-3878-1_8","title":"A Versatile Method for Inducible Protein Production in 293 Cells Using the PiggyBac Transposon System","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Sunnybrook Health Science Centre; St. Michael's Hospital","funders":"","keywords":"Transposable element; Production (economics); Biology; Computational biology; Cell biology; Genetics; Gene; Genome","score_opus":0.02526294164159495,"score_gpt":0.39916106176293814,"score_spread":0.3738981201213432,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400038698","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1897391,0.0025197521,0.80544156,0.00013890794,0.0008885683,0.0011131533,0.000022450502,0.000028017063,0.000108498185],"genre_scores_gemma":[0.41771114,0.000032513126,0.58096975,0.00012401864,0.0002580952,0.00068990747,0.00004240006,0.000051757466,0.00012038945],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997063,0.0014489092,0.00035520524,0.00071460044,0.00006443311,0.00035385162],"domain_scores_gemma":[0.99936694,0.000057892546,0.000066292756,0.00041638318,0.000048430844,0.000044068187],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018303109,0.00021392682,0.00024444782,0.00017066888,0.00007860919,0.00003326345,0.00020774973,0.0003129081,0.000007102921],"category_scores_gemma":[0.0001855797,0.0001639571,0.00017933862,0.00037242376,0.00007393452,0.000005592601,0.00006811724,0.0002127158,0.0000013391218],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010478092,0.000042354128,0.000056550674,0.0002072159,0.000043370463,0.0000075092653,0.00010699089,0.0025834918,0.988879,0.0007855272,0.00007718588,0.007105974],"study_design_scores_gemma":[0.0003153922,0.0002633446,0.00001059206,0.00014458783,0.000030704887,0.000018913299,0.00015903231,0.0070236977,0.98354703,0.0013815422,0.0069028926,0.00020228817],"about_ca_topic_score_codex":0.00017565227,"about_ca_topic_score_gemma":0.00003437378,"teacher_disagreement_score":0.22797205,"about_ca_system_score_codex":0.00007178639,"about_ca_system_score_gemma":0.00012628385,"threshold_uncertainty_score":0.66859764},"labels":[],"label_agreement":null},{"id":"W4400178062","doi":"10.1007/978-1-0716-3961-0_1","title":"Expansion and Storage of Insect Cells and Virus Stocks","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nexen (Canada)","funders":"","keywords":"Insect; Biology; Ecology","score_opus":0.01528915380415272,"score_gpt":0.35964566350876653,"score_spread":0.3443565097046138,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400178062","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72930956,0.014956038,0.2550468,0.000022363829,0.00028048505,0.0001344557,0.00002499384,0.000011851996,0.00021346456],"genre_scores_gemma":[0.9143646,0.0015409495,0.083615474,0.00022024232,0.000062002415,0.000035526587,0.000024515119,0.000028305432,0.00010841643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987732,0.00037597617,0.00021260532,0.00042484637,0.00004007281,0.00017325251],"domain_scores_gemma":[0.99959964,0.00005253196,0.000040611925,0.00021981588,0.000023577122,0.000063807434],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00040097677,0.00014859252,0.0001966652,0.00012085291,0.000029088887,0.000015131348,0.00007760911,0.00022241643,0.00001529066],"category_scores_gemma":[0.00008465273,0.00012992055,0.00006249531,0.000112368725,0.00016318168,0.0000028333693,0.00018945112,0.000115021525,6.904778e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004019738,0.000027059932,0.00046658452,0.00006720278,0.000029551637,0.000013792213,0.00005394572,0.000038793096,0.98170155,0.00050728576,0.000108358414,0.016945697],"study_design_scores_gemma":[0.00024727464,0.00048804007,0.00040274454,0.00003991508,0.000017041644,0.00002116646,0.000025021347,0.0003467147,0.98790497,0.0036670526,0.006678803,0.00016123116],"about_ca_topic_score_codex":0.00007112069,"about_ca_topic_score_gemma":0.000012288055,"teacher_disagreement_score":0.18505503,"about_ca_system_score_codex":0.0000066087923,"about_ca_system_score_gemma":0.000032381475,"threshold_uncertainty_score":0.5298006},"labels":[],"label_agreement":null},{"id":"W4400178065","doi":"10.1007/978-1-0716-3961-0_19","title":"Functional Baculovirus Particle Quantification via Plaque Assay","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Espace pour la vie; McGill University","funders":"","keywords":"Particle (ecology); Biology","score_opus":0.027680928595242585,"score_gpt":0.3883577759973428,"score_spread":0.3606768474021002,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400178065","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.068044126,0.004294953,0.92555255,0.0002862679,0.000969372,0.00015664793,0.000014499364,0.000047373665,0.0006341915],"genre_scores_gemma":[0.8911269,0.00020605004,0.10649463,0.00075126754,0.0003082418,0.00018935247,0.00027071414,0.000048559723,0.00060434296],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99789286,0.0008708076,0.00028748004,0.0005863506,0.00007224508,0.00029023198],"domain_scores_gemma":[0.9993996,0.00007263706,0.000042095955,0.0003580602,0.00004638324,0.00008119545],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008632364,0.00017584214,0.00015394638,0.00009190259,0.000060517137,0.000039202674,0.00013976797,0.00026498595,0.00016496924],"category_scores_gemma":[0.00022081561,0.00016014338,0.00014905228,0.00024354823,0.000105031926,0.0000050467816,0.00010412345,0.0001635692,0.00006687928],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006216079,0.000060188377,0.0011065522,0.000019121404,0.000049841092,0.000013331787,0.000012302735,0.00031721493,0.97295034,0.0048047667,0.0014020819,0.019202068],"study_design_scores_gemma":[0.00024290533,0.00023112545,0.0007286268,0.00001654291,0.000018631003,0.00003195892,0.000011704018,0.0029116957,0.93855745,0.007478006,0.0495335,0.00023786536],"about_ca_topic_score_codex":0.000037713227,"about_ca_topic_score_gemma":0.0000143139205,"teacher_disagreement_score":0.8230827,"about_ca_system_score_codex":0.000025311103,"about_ca_system_score_gemma":0.00007066058,"threshold_uncertainty_score":0.6530457},"labels":[],"label_agreement":null},{"id":"W4400178070","doi":"10.1007/978-1-0716-3961-0","title":"Baculovirus","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Instituto de Tecnologia Química e Biológica, Universidade Nova de Lisboa; Universidade Nova de Lisboa; Centre National de la Recherche Scientifique; Wageningen University and Research; University of Waterloo; Ligue Contre le Cancer","keywords":"Physics","score_opus":0.01672343982403277,"score_gpt":0.3918025218925901,"score_spread":0.37507908206855733,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400178070","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00034860268,0.051171303,0.34517106,0.00013862312,0.0035801537,0.00073003495,0.0002191366,0.00010034968,0.5985407],"genre_scores_gemma":[0.00020471506,0.0017754436,0.20969398,0.0023526268,0.001356837,0.00028224185,0.0014813684,0.00032404563,0.78252876],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9971093,0.0006608561,0.00050449313,0.0011377875,0.00010563104,0.00048191272],"domain_scores_gemma":[0.9987685,0.00004713171,0.00014187313,0.0008443107,0.000064741434,0.00013345733],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0006139906,0.0005292574,0.0005327003,0.00028991024,0.00004379752,0.00003832664,0.00045074304,0.001390224,0.00021317076],"category_scores_gemma":[0.00022651476,0.0004962749,0.00047562298,0.00012808948,0.00021337098,0.0000013504238,0.0005732778,0.00060753897,0.00016619691],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000591147,0.00005307174,0.00004098583,0.00014899908,0.00024122745,0.00012728694,0.000014514202,0.000046221223,0.88617206,0.007836706,0.090366594,0.0148932105],"study_design_scores_gemma":[0.0002687878,0.0003638723,0.0000046641967,0.000109834626,0.00007054515,0.000036269277,0.0000032858834,0.00001813122,0.085179746,0.065830626,0.8475376,0.00057668483],"about_ca_topic_score_codex":0.000015534924,"about_ca_topic_score_gemma":0.000016945598,"teacher_disagreement_score":0.8009923,"about_ca_system_score_codex":0.00008120871,"about_ca_system_score_gemma":0.0004095932,"threshold_uncertainty_score":0.9999062},"labels":[],"label_agreement":null},{"id":"W4400178076","doi":"10.1007/978-1-0716-3961-0_14","title":"Recombinant AAV Production","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Espace pour la vie; McGill University","funders":"","keywords":"Recombinant DNA; Production (economics); Chemistry; Biochemistry; Economics; Microeconomics","score_opus":0.033123252103812395,"score_gpt":0.44163378554916094,"score_spread":0.40851053344534854,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400178076","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4433127,0.017477985,0.5328148,0.0017740334,0.0023851984,0.0005897616,0.000006832215,0.00008011356,0.0015585977],"genre_scores_gemma":[0.30844396,0.0025458126,0.6811812,0.0010858148,0.00082171283,0.000460105,0.00028442184,0.00020839077,0.004968599],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99718237,0.0013382566,0.00025761756,0.00073296746,0.00007843868,0.00041034783],"domain_scores_gemma":[0.9992952,0.000036373407,0.000027289623,0.0005308718,0.00004924602,0.000061069186],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002076068,0.00018450848,0.00019102453,0.0002197917,0.000037564383,0.000025044863,0.00026744383,0.00026826817,0.000052979307],"category_scores_gemma":[0.00040565626,0.00016822807,0.0001168403,0.00037421717,0.00014655097,0.0000025964655,0.00014560741,0.00026642272,0.000033322573],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020964774,0.000037550482,0.00014344348,0.000023011566,0.000048181057,0.000025344376,0.000022438539,0.000045638833,0.89242584,0.0007457592,0.0003581664,0.10591497],"study_design_scores_gemma":[0.00017866712,0.001259409,0.000042475058,0.000019963029,0.000007486027,0.000039073755,0.000014357644,0.00015491922,0.9380982,0.006183753,0.05380282,0.00019887228],"about_ca_topic_score_codex":0.000013875596,"about_ca_topic_score_gemma":0.000039363542,"teacher_disagreement_score":0.1483664,"about_ca_system_score_codex":0.000038882717,"about_ca_system_score_gemma":0.00010346551,"threshold_uncertainty_score":0.6860142},"labels":[],"label_agreement":null},{"id":"W4400178150","doi":"10.1007/978-1-0716-3961-0_15","title":"Recombinant AAV Purification","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Espace pour la vie; McGill University","funders":"","keywords":"Recombinant DNA; Chemistry; Biochemistry; Gene","score_opus":0.034995741690516904,"score_gpt":0.4420500836811246,"score_spread":0.4070543419906077,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400178150","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1780949,0.015139134,0.80254436,0.0010316167,0.00082638446,0.00039162906,0.000008923091,0.000054104545,0.0019089609],"genre_scores_gemma":[0.2335125,0.0023542736,0.75891304,0.0012189699,0.00041585957,0.00043752103,0.00041402355,0.00016819917,0.0025656172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973249,0.0012909053,0.00027530736,0.0006414408,0.00007632053,0.0003911318],"domain_scores_gemma":[0.99924624,0.00005772912,0.000030187159,0.00055459514,0.000046096477,0.000065172615],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018970667,0.00017660427,0.0001833983,0.00021468541,0.000034549317,0.000030911207,0.000330288,0.0002979517,0.000068425616],"category_scores_gemma":[0.00025726866,0.00016381101,0.00011841657,0.00034689895,0.00013214034,0.0000023294072,0.0001262463,0.00024380008,0.000045846507],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015768585,0.000034616845,0.00015987917,0.000017982995,0.000041957028,0.000020992225,0.000020418123,0.00002271107,0.89803934,0.0021510972,0.00020897164,0.09912432],"study_design_scores_gemma":[0.00023457737,0.0010823709,0.000066612236,0.000014774306,0.0000070135357,0.000020355536,0.0000120781215,0.00036911076,0.91400343,0.0076246043,0.07636972,0.00019534008],"about_ca_topic_score_codex":0.000014904857,"about_ca_topic_score_gemma":0.000027363432,"teacher_disagreement_score":0.09892898,"about_ca_system_score_codex":0.000036436857,"about_ca_system_score_gemma":0.000121949575,"threshold_uncertainty_score":0.6680019},"labels":[],"label_agreement":null},{"id":"W4400178174","doi":"10.1007/978-1-0716-3961-0_9","title":"Probing Baculovirus Vector Gene Essentiality for Foreign Gene Expression Using a CRISPR-Cas9 System","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Waterloo","funders":"","keywords":"CRISPR; Gene; Vector (molecular biology); Genetics; Biology; Cas9; Computational biology; Recombinant DNA","score_opus":0.032359434419104466,"score_gpt":0.4032582772389763,"score_spread":0.37089884281987184,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400178174","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15938182,0.005875479,0.83261335,0.000020249092,0.0010585921,0.00068480335,0.00009317842,0.0000695832,0.00020293832],"genre_scores_gemma":[0.4683624,0.000059817947,0.53032947,0.00014476528,0.00044717506,0.0003440178,0.00018429833,0.000077361336,0.000050718714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968495,0.0009645947,0.00053031585,0.0010066762,0.00009845905,0.0005504595],"domain_scores_gemma":[0.999002,0.000078419085,0.000121702884,0.000565158,0.00010274479,0.00013001448],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0010504617,0.00034990313,0.0003939511,0.00018056804,0.00015411623,0.000075080185,0.00027964133,0.00048343203,0.000018409713],"category_scores_gemma":[0.00023597386,0.00031317474,0.00036676865,0.00024336838,0.0001070894,0.000008471949,0.0002744311,0.00017882368,0.000003559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013490942,0.000056359342,0.00019325645,0.0003060704,0.00009637599,0.000034451816,0.000029732117,0.000672463,0.9949276,0.0016708424,0.00018652572,0.0016914441],"study_design_scores_gemma":[0.00051044376,0.00026193517,0.000016625716,0.00014040932,0.00006694135,0.00008003004,0.000054180593,0.0052003325,0.98714775,0.001751466,0.0043902057,0.00037968933],"about_ca_topic_score_codex":0.00006325835,"about_ca_topic_score_gemma":0.0000038613534,"teacher_disagreement_score":0.30898058,"about_ca_system_score_codex":0.00009195189,"about_ca_system_score_gemma":0.00015373023,"threshold_uncertainty_score":0.99993205},"labels":[],"label_agreement":null},{"id":"W4400215685","doi":"10.1007/978-1-0716-3981-8_12","title":"Phylogenetic Survival Analysis","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Phylogenetic tree; Evolutionary biology; Biology; Zoology; Genetics; Gene","score_opus":0.021487775814479075,"score_gpt":0.37967259573305934,"score_spread":0.35818481991858026,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400215685","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15941207,0.0034815,0.8347484,0.00010746175,0.00049087335,0.00009113962,0.000021374994,0.000018774179,0.0016284318],"genre_scores_gemma":[0.5907335,0.00011195392,0.40798485,0.0002693686,0.00010326932,0.000011547576,0.00024024442,0.000018763067,0.00052644114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983167,0.0006447154,0.00020859642,0.00051606016,0.0000654378,0.00024846697],"domain_scores_gemma":[0.9995028,0.00003447089,0.000028427889,0.00034664402,0.000031596603,0.00005609486],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058319455,0.0001577331,0.00022660692,0.00029362072,0.000030452817,0.000026180896,0.00022096367,0.00027660112,0.00012442059],"category_scores_gemma":[0.000093545605,0.00015237756,0.00021551595,0.00071262516,0.000090816524,0.0000011377551,0.00013924846,0.00012721554,0.000012224333],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015698019,0.00001221888,0.022726975,0.0000134272605,0.00043687533,0.000020085039,0.000039440452,0.0016222753,0.9543114,0.0032588632,0.00005337532,0.01748942],"study_design_scores_gemma":[0.00082209194,0.00044166643,0.054459944,0.000018273855,0.00093521236,0.000037942238,0.00014306788,0.0034349628,0.6594036,0.019072574,0.26011366,0.0011169597],"about_ca_topic_score_codex":0.00002938519,"about_ca_topic_score_gemma":0.00004117004,"teacher_disagreement_score":0.43132147,"about_ca_system_score_codex":0.000010875569,"about_ca_system_score_gemma":0.000039525297,"threshold_uncertainty_score":0.62137765},"labels":[],"label_agreement":null},{"id":"W4400257839","doi":"10.1007/978-1-0716-3894-1_4","title":"Assaying Lysosomal Enzyme Activity in Dictyostelium discoideum","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"","keywords":"Dictyostelium discoideum; Chemistry; Enzyme; Cell biology; Biochemistry; Biology; Gene","score_opus":0.04046388187552387,"score_gpt":0.4463705898138855,"score_spread":0.40590670793836164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400257839","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41619304,0.0051022237,0.57148886,0.0022334352,0.0003814002,0.00050879136,0.00000579006,0.000088615845,0.0039978493],"genre_scores_gemma":[0.8371359,0.00010310935,0.16185765,0.00031391662,0.000074676354,0.00011418837,0.00001815306,0.00005448381,0.00032789638],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963696,0.001813196,0.00033102845,0.00066363823,0.00018656474,0.0006359718],"domain_scores_gemma":[0.99889696,0.00052793615,0.000029431314,0.00039895123,0.00003200207,0.00011473218],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021184476,0.00022177366,0.0005084471,0.0006786344,0.000028085993,0.000029922365,0.00020042903,0.00032718616,0.00012490021],"category_scores_gemma":[0.0012887982,0.00019087779,0.0001532642,0.001008672,0.00019074543,0.00006473401,0.0002453751,0.00091704004,0.000033003707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012705113,0.00013398583,0.017270725,0.00014741311,0.000050748877,0.0017847405,0.00018507446,0.00002006073,0.8916645,0.0014923791,0.000023500015,0.08709982],"study_design_scores_gemma":[0.0032993676,0.0010644133,0.036833093,0.00057560555,0.00008825784,0.0004444149,0.00033025717,0.020767093,0.90662825,0.015523915,0.013575225,0.0008700854],"about_ca_topic_score_codex":0.00041003717,"about_ca_topic_score_gemma":0.000081439066,"teacher_disagreement_score":0.4209429,"about_ca_system_score_codex":0.00026454992,"about_ca_system_score_gemma":0.00019336681,"threshold_uncertainty_score":0.77837706},"labels":[],"label_agreement":null},{"id":"W4400258343","doi":"10.1007/978-1-0716-3894-1","title":"Dictyostelium discoideum","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Force Microscopy Techniques and Applications","field":"Physics and Astronomy","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Division of Chemistry; Royal Holloway, University of London; School of Medicine, Johns Hopkins University; Goddard Space Flight Center; Universität Potsdam; Directorate for Biological Sciences; National Institutes of Health; Rijksuniversiteit Groningen; Albright College; Trent University; University College London; Florida International University; California Institute of Technology; National Institute of Allergy and Infectious Diseases; Whiting School of Engineering, Johns Hopkins University; London School of Hygiene and Tropical Medicine; University of Tokyo; Johns Hopkins University","keywords":"Dictyostelium discoideum; Biology; Genetics; Gene","score_opus":0.012856161329236426,"score_gpt":0.40874923706650723,"score_spread":0.3958930757372708,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400258343","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000047301114,0.0007675467,0.61139137,0.000118558164,0.00017176452,0.0002471683,0.000113732734,0.00005140582,0.38713372],"genre_scores_gemma":[0.00003508371,0.000017871038,0.6080119,0.00013458604,0.00021287006,0.00025571813,0.00047646355,0.00008451655,0.39077097],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"not_applicable","domain_scores_codex":[0.9985237,0.00018373119,0.00037519715,0.000565301,0.000044096345,0.0003079421],"domain_scores_gemma":[0.99921113,0.00008414311,0.0001041698,0.0005311297,0.000021866033,0.000047577567],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00038255344,0.00031596018,0.00044581777,0.0001854884,0.000031251948,0.000031027153,0.00035924703,0.00031020193,0.00041511786],"category_scores_gemma":[0.000005505979,0.00028819378,0.00024986477,0.00012516581,0.0001628282,0.00001042435,0.00027899878,0.00070912705,0.00011649298],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000019624197,0.000024664749,0.00003340336,0.000035293648,0.000073329305,0.0000072678004,0.00003072753,0.0000025840072,0.09479772,0.8657395,0.011046036,0.028207483],"study_design_scores_gemma":[0.000041149447,0.000023654213,6.2686655e-7,0.000059453963,0.00003343945,9.674067e-7,0.000005069136,0.000029629397,0.017778216,0.46875912,0.5130657,0.00020298002],"about_ca_topic_score_codex":0.000060525897,"about_ca_topic_score_gemma":0.0000017829796,"teacher_disagreement_score":0.50201964,"about_ca_system_score_codex":0.00006995059,"about_ca_system_score_gemma":0.00014951693,"threshold_uncertainty_score":0.999957},"labels":[],"label_agreement":null},{"id":"W4400407628","doi":"10.1007/978-1-0716-3902-3_2","title":"Zebrafish as a Model for Lipidomics and Similar Investigations","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Lipidomics; Zebrafish; Computational biology; Biology; Bioinformatics; Genetics","score_opus":0.02740286227377438,"score_gpt":0.39088364229273753,"score_spread":0.36348078001896317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400407628","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06552601,0.008662764,0.92353034,0.0011435774,0.00026593098,0.00031524297,0.00004365247,0.000020447458,0.0004920516],"genre_scores_gemma":[0.032439157,0.0011157752,0.9642853,0.001319865,0.00011637292,0.000192894,0.00008316298,0.000038431594,0.00040900172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9986834,0.0001995266,0.00024808862,0.0005472463,0.000034440098,0.00028729351],"domain_scores_gemma":[0.9995083,0.00009914313,0.000035487254,0.000247349,0.000041877924,0.00006780373],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008068149,0.00018549054,0.00025963434,0.00016058104,0.00005725507,0.00003102604,0.00013707965,0.00023357989,0.000004076945],"category_scores_gemma":[0.0008234495,0.00017499735,0.00010647264,0.00016852228,0.00017748032,0.0000027936255,0.00017487776,0.0001261014,0.0000011744627],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002087828,0.0000146779175,0.00010452908,0.000035729387,0.00008719507,0.0000024993224,0.000050164097,0.00017684764,0.92188054,0.073204465,0.00028427687,0.0041382173],"study_design_scores_gemma":[0.0007012303,0.0003655435,0.000036203022,0.000022436188,0.00008311134,0.000028873967,0.00005848397,0.099176794,0.4756706,0.32482386,0.09858225,0.0004506142],"about_ca_topic_score_codex":0.000008007823,"about_ca_topic_score_gemma":0.000016533015,"teacher_disagreement_score":0.4462099,"about_ca_system_score_codex":0.000013045918,"about_ca_system_score_gemma":0.00009043772,"threshold_uncertainty_score":0.71361846},"labels":[],"label_agreement":null},{"id":"W4400407650","doi":"10.1007/978-1-0716-3902-3_1","title":"The Interplay of Lipid Signaling in Musculoskeletal Cross Talk: Implications for Health and Disease","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Adipose Tissue and Metabolism","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Disease; Medicine; Psychology; Internal medicine","score_opus":0.02390965441470196,"score_gpt":0.4882981677400203,"score_spread":0.46438851332531833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400407650","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.19704,0.04187627,0.7535228,0.0066609997,0.00021955959,0.00059070677,0.00002502342,0.000015880918,0.00004873463],"genre_scores_gemma":[0.47429225,0.0009822899,0.52273226,0.0012813476,0.00014638949,0.00030223763,0.000056521665,0.00003600142,0.00017072224],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9989245,0.0003414452,0.00029224512,0.00022085609,0.000023318042,0.00019765749],"domain_scores_gemma":[0.99917084,0.00046815188,0.00003949166,0.00018412944,0.000025925954,0.00011148039],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012168719,0.00008026087,0.00023581764,0.00011233996,0.000032895758,0.000007730526,0.000066649525,0.00005979456,0.0000031372142],"category_scores_gemma":[0.0010027804,0.000055417473,0.000076906465,0.00016934743,0.00016214073,0.000012759567,0.000045979243,0.0001311082,3.0089444e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017716632,0.000060815895,0.008098838,0.00047580825,0.00006939496,0.0000122916645,0.0005138406,0.000008843958,0.58617485,0.069116674,0.000044372355,0.3352471],"study_design_scores_gemma":[0.006065307,0.002648148,0.09594313,0.0014217418,0.00040248237,0.00018779657,0.00062143145,0.0043506343,0.0898506,0.33139452,0.46622822,0.00088597304],"about_ca_topic_score_codex":0.000023096096,"about_ca_topic_score_gemma":0.000007095381,"teacher_disagreement_score":0.49632427,"about_ca_system_score_codex":0.000019991145,"about_ca_system_score_gemma":0.00016072346,"threshold_uncertainty_score":0.2259859},"labels":[],"label_agreement":null},{"id":"W4400496343","doi":"10.1007/978-1-0716-3954-2_15","title":"Advances in Tissue Culture and Transformation Studies in Non-model Species: Passiflora spp. (Passifloraceae)","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lethbridge College","funders":"","keywords":"Passifloraceae; Passiflora; Transformation (genetics); Biology; Botany; Genetics","score_opus":0.03003538451000794,"score_gpt":0.4047673738746181,"score_spread":0.37473198936461016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400496343","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05325922,0.16073352,0.7822512,0.0007217672,0.00046967185,0.00046688286,0.000025114376,0.000019980142,0.0020526394],"genre_scores_gemma":[0.46823648,0.094051145,0.433352,0.0005888068,0.0004072923,0.00035283694,0.0006951895,0.00006783629,0.0022484052],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985805,0.00032490562,0.00033728717,0.00045705025,0.000053057905,0.000247163],"domain_scores_gemma":[0.99972206,0.000029482888,0.000036885216,0.000148977,0.000029789397,0.00003280316],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006019354,0.00020543985,0.00029118132,0.00016759768,0.000027923534,0.000020225758,0.00011106454,0.00033276374,0.000004027077],"category_scores_gemma":[0.000117332005,0.00016208674,0.0000401792,0.00023875674,0.0001399479,0.000019736499,0.000051639337,0.00021155099,0.0000029742769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028835486,0.000023440229,0.00023190137,0.000126343,0.00001632091,0.000042196505,0.0010861612,0.0012216065,0.9683613,0.0010836839,0.00017549646,0.02760272],"study_design_scores_gemma":[0.00071833894,0.00027985562,0.00016334518,0.00023362292,0.000021357591,0.00006193224,0.0009083332,0.009095885,0.75087583,0.0043781283,0.23281693,0.00044642956],"about_ca_topic_score_codex":0.00002243272,"about_ca_topic_score_gemma":0.00096307,"teacher_disagreement_score":0.41497728,"about_ca_system_score_codex":0.000042491745,"about_ca_system_score_gemma":0.00004540856,"threshold_uncertainty_score":0.66097057},"labels":[],"label_agreement":null},{"id":"W4400593097","doi":"10.1007/978-1-0716-4007-4_1","title":"Exploring the Alternative Proteome with OpenProt and Mass Spectrometry","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Centre Hospitalier Universitaire de Sherbrooke; Université de Sherbrooke","funders":"","keywords":"Proteome; Mass spectrometry; Computational biology; Chemistry; Chromatography; Biology; Biochemistry","score_opus":0.05562045581601686,"score_gpt":0.40435186247882904,"score_spread":0.34873140666281216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400593097","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04809674,0.0005646191,0.94816214,0.0004893869,0.000020248557,0.00030970995,0.000007255219,0.00007324343,0.002276687],"genre_scores_gemma":[0.019190334,0.00017552404,0.97873384,0.000051517763,0.000037751273,0.0016921676,0.0000042982156,0.000023123617,0.00009143611],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992304,0.00009384381,0.00013000103,0.0003334451,0.000037350404,0.0001749528],"domain_scores_gemma":[0.99953544,0.00013560323,0.000029936251,0.00026172298,0.000013153257,0.000024153049],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003877526,0.00011623672,0.00013229779,0.00006416894,0.000042050433,0.000029746627,0.0001943034,0.000049474354,0.000028517303],"category_scores_gemma":[0.000047630518,0.00007436046,0.000024515077,0.00023280346,0.00013201112,0.000041363135,0.00009948406,0.00034176387,0.0000018545821],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000009136007,0.000005432268,0.00010185426,0.000028763077,0.000021126616,0.00001885832,0.00006187631,0.000011678462,0.9538982,0.030087441,6.2123576e-7,0.01575503],"study_design_scores_gemma":[0.00007212184,0.00003481807,0.000008817903,0.000042452477,0.0000070725087,0.00002497276,0.000046825928,0.00057028775,0.89551,0.09936636,0.004212643,0.00010360872],"about_ca_topic_score_codex":0.000020123847,"about_ca_topic_score_gemma":0.0000011365945,"teacher_disagreement_score":0.06927892,"about_ca_system_score_codex":0.000037994996,"about_ca_system_score_gemma":0.0000151298445,"threshold_uncertainty_score":0.30323315},"labels":[],"label_agreement":null},{"id":"W4400593154","doi":"10.1007/978-1-0716-4007-4_16","title":"SACCHARIS v2: Streamlining Prediction of Carbohydrate-Active Enzyme Specificities Within Large Datasets","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Computer science; Computational biology; Biology","score_opus":0.01680262641057744,"score_gpt":0.3352512665111104,"score_spread":0.318448640100533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400593154","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30129698,0.0048470628,0.69089705,0.00004237375,0.0015688173,0.0001858465,0.00094740896,0.00004256764,0.00017187542],"genre_scores_gemma":[0.7529774,0.00044905473,0.24399497,0.000058126203,0.0004577738,0.000038084112,0.0018463783,0.000049537266,0.00012868777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998431,0.00037741524,0.0003712883,0.0005146822,0.000056439003,0.00024912623],"domain_scores_gemma":[0.9994757,0.000017967775,0.00007183077,0.00035727705,0.000040051324,0.000037180445],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092127547,0.00018485337,0.0002513346,0.00019303182,0.000025289944,0.000013215063,0.00015134813,0.0002663687,0.00002105337],"category_scores_gemma":[0.00025407723,0.00017282928,0.00008402084,0.00026713224,0.000091124275,0.000005427165,0.00010508488,0.00021027405,0.000002062444],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000038055336,0.00003454359,0.00009805227,0.000050016235,0.00008305868,0.0000071160066,0.00014585938,0.00036311103,0.99254394,0.0014302603,0.00012178437,0.0050841784],"study_design_scores_gemma":[0.0001736868,0.00017525967,0.000099060555,0.00004207597,0.000028700308,0.000016573182,0.00013058048,0.0008380828,0.97649866,0.0003853897,0.021467073,0.00014487842],"about_ca_topic_score_codex":0.000066336805,"about_ca_topic_score_gemma":0.000014097367,"teacher_disagreement_score":0.4516804,"about_ca_system_score_codex":0.000019530355,"about_ca_system_score_gemma":0.000053422344,"threshold_uncertainty_score":0.70477736},"labels":[],"label_agreement":null},{"id":"W4400593163","doi":"10.1007/978-1-0716-4007-4","title":"Protein Bioinformatics","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Genetics, Bioinformatics, and Biomedical Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Department of Artificial Intelligence, Korea University; Det Sundhedsvidenskabelige Fakultet, Københavns Universitet; Sahlgrenska Akademin; Lombardi Comprehensive Cancer Center, Georgetown University; Swiss Institute of Bioinformatics; Technische Universität München; Faculty of Health and Medical Sciences, University of Western Australia; Masarykova Univerzita; Stockholms Universitet; Centre National de la Recherche Scientifique; Universiteit Gent; Novo Nordisk; John S. and James L. Knight Foundation; Danmarks Tekniske Universitet; Hanyang University; Institut National de la Santé et de la Recherche Médicale; Children’s Hospital of Wisconsin Research Institute; Universität Bremen; Georgetown University; University of Arkansas for Medical Sciences; Johns Hopkins University; Agriculture and Agri-Food Canada; Science for Life Laboratory; University of Lethbridge; Florida International University; Korea Basic Science Institute; University of Nebraska Medical Center; Central European Institute of Technology; Université de Genève; Göteborgs Universitet","keywords":"Computer science; Computational biology; Bioinformatics; Biology","score_opus":0.026543148663550165,"score_gpt":0.3867970642703179,"score_spread":0.3602539156067677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400593163","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015198301,0.008049683,0.65550536,0.00039930586,0.0010894925,0.0014984265,0.00019950914,0.00006307796,0.33304316],"genre_scores_gemma":[0.00001896175,0.00091612333,0.65360075,0.00066859013,0.00042800192,0.0001402523,0.0013276265,0.00012233401,0.34277737],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964372,0.0004820566,0.0011020432,0.0007627153,0.00033177112,0.00088421913],"domain_scores_gemma":[0.9982439,0.0000671587,0.00023122039,0.001047296,0.00015674338,0.00025366654],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0022083393,0.00063055527,0.0007218561,0.0005717677,0.000048661703,0.000071686154,0.00095074467,0.0020707233,0.000086241176],"category_scores_gemma":[0.000955088,0.0005500599,0.00039354476,0.00022267431,0.000680387,0.000002944244,0.0010577923,0.0010838367,0.00029346338],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000108099404,0.00011172675,0.000016570937,0.0018339095,0.00051165104,0.00012583964,0.00016052704,0.000011503525,0.7441947,0.01018541,0.040009785,0.20273031],"study_design_scores_gemma":[0.00042588217,0.0007386746,0.0000022057368,0.00025037455,0.000048644353,0.000033904365,0.000029428042,0.00054444687,0.0933707,0.033805303,0.8700232,0.00072726083],"about_ca_topic_score_codex":0.000008538024,"about_ca_topic_score_gemma":0.000018294486,"teacher_disagreement_score":0.8300134,"about_ca_system_score_codex":0.0001273628,"about_ca_system_score_gemma":0.0009961948,"threshold_uncertainty_score":0.99969506},"labels":[],"label_agreement":null},{"id":"W4400641875","doi":"10.1007/978-1-0716-3666-4_21","title":"Correction to: SARS-CoV-2 S-Protein–Ace2 Binding Analysis Using Surface Plasmon Resonance","year":2024,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Advanced Biosensing Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Surface plasmon resonance; Coronavirus disease 2019 (COVID-19); Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); Virology; Medicine; Materials science; Nanotechnology; Internal medicine; Nanoparticle; Infectious disease (medical specialty)","score_opus":0.032802048849884566,"score_gpt":0.4236710427039036,"score_spread":0.390868993854019,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400641875","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018662568,0.003754326,0.9689749,0.00014940753,0.006046278,0.00068723236,0.00012325573,0.00010136035,0.0015006536],"genre_scores_gemma":[0.0014015005,0.00037862087,0.97960943,0.0004067888,0.00037936165,0.00008990901,0.0011187452,0.0001477474,0.016467888],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99634844,0.0007220167,0.0006162841,0.0015741864,0.00013290955,0.000606169],"domain_scores_gemma":[0.9984105,0.000046689296,0.000262841,0.0010801628,0.00012776567,0.00007203491],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00093693833,0.00056488824,0.0007762303,0.000578921,0.00011009169,0.000051439358,0.00049289706,0.0012956287,0.000004197478],"category_scores_gemma":[0.00046895267,0.0005893848,0.00044478456,0.0018628788,0.00015482455,0.0000030674198,0.0005453585,0.0010104285,0.000011679829],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003131323,0.000028174909,0.0000239219,0.000028994948,0.00021760102,0.000018869032,0.000012493467,0.0004283241,0.96045643,0.00014376006,0.035254773,0.0033553555],"study_design_scores_gemma":[0.000065874025,0.0001266082,0.000004136103,0.00013596629,0.0002055296,0.000014698328,0.000010020269,0.0034905334,0.67389655,0.00071781274,0.32085243,0.0004798259],"about_ca_topic_score_codex":0.00020854645,"about_ca_topic_score_gemma":0.00023842302,"teacher_disagreement_score":0.28655985,"about_ca_system_score_codex":0.00018081474,"about_ca_system_score_gemma":0.00017861948,"threshold_uncertainty_score":0.9996558},"labels":[],"label_agreement":null},{"id":"W4400837159","doi":"10.1007/978-1-0716-4091-3","title":"Skin Stem Cells","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Directorate for Biological Sciences; Shahid Beheshti University of Medical Sciences; Aja University of Medical Sciences; Universitätsspital Zürich; Student Research Committee, Tabriz University of Medical Sciences; Universität Zürich; Barts and The London School of Medicine and Dentistry; Orta Doğu Teknik Üniversitesi; Yeditepe Üniversitesi; Università di Catania; Tehran University of Medical Sciences and Health Services; Queen Mary University of London; Lawson Health Research Institute","keywords":"Stem cell; Biology; Cell biology","score_opus":0.024189760480823757,"score_gpt":0.3812793921581421,"score_spread":0.35708963167731833,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400837159","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00038053477,0.04115054,0.5877437,0.00022617452,0.002545974,0.0014841231,0.00026282272,0.00008429752,0.36612186],"genre_scores_gemma":[0.000035721296,0.0014563216,0.21652533,0.00043521068,0.0004593604,0.00014399823,0.0005345876,0.000254588,0.7801549],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950636,0.0015821331,0.00067623134,0.0016144732,0.0002230561,0.0008405029],"domain_scores_gemma":[0.9982172,0.000113105394,0.00015943458,0.0012443939,0.00009935285,0.00016650127],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019321847,0.0006517302,0.0007693117,0.00050480687,0.00003834555,0.00004498883,0.0009885743,0.0019739557,0.000095328],"category_scores_gemma":[0.00006673214,0.0006370874,0.0004722631,0.00020447877,0.0003347335,0.0000014477033,0.0011486877,0.0010907899,0.00034519518],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042463955,0.00003554971,0.0000065068407,0.00023260142,0.00022223817,0.00024096851,0.000016747292,0.000029319131,0.95786554,0.0018200601,0.016667062,0.022820918],"study_design_scores_gemma":[0.00020651158,0.00021127134,6.4253106e-7,0.000068783134,0.00003520901,0.00002882432,0.000005062232,0.00003723552,0.45892042,0.0053874897,0.5346761,0.00042248983],"about_ca_topic_score_codex":0.000012638547,"about_ca_topic_score_gemma":0.000017992788,"teacher_disagreement_score":0.518009,"about_ca_system_score_codex":0.00017170962,"about_ca_system_score_gemma":0.0006305171,"threshold_uncertainty_score":0.99960804},"labels":[],"label_agreement":null},{"id":"W4400913266","doi":"10.1007/978-1-0716-4027-2","title":"Hepatitis B Virus","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"NIH Clinical Center; Shanghai Medical College, Fudan University; Universitätsklinikum Hamburg-Eppendorf; Directorate for Biological Sciences; Peking University; Universitat de Barcelona; Centre National de la Recherche Scientifique; Ministry of Education, India; Albert-Ludwigs-Universität Freiburg; University College London; University of Toronto; Deutsches Zentrum für Infektionsforschung; Institut National de la Santé et de la Recherche Médicale; Fudan University; Gilead Sciences","keywords":"Virology; Hepatitis a virus; Medicine; Virus","score_opus":0.036919327806143834,"score_gpt":0.4229706011217634,"score_spread":0.38605127331561956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400913266","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0001020686,0.04104485,0.25119698,0.00089723634,0.002033317,0.0009465825,0.00016369368,0.00021850895,0.7033968],"genre_scores_gemma":[0.000010371594,0.0076647755,0.59862083,0.0019887225,0.0003055294,0.00015086256,0.00019836822,0.0001499522,0.39091057],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9972427,0.0007001241,0.0006154744,0.00081423915,0.00014936944,0.00047811025],"domain_scores_gemma":[0.99874014,0.0003210589,0.00011081975,0.00063728984,0.00008704699,0.00010366248],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00097265653,0.00046987686,0.0013071841,0.00059076323,0.000028718301,0.000011836728,0.00018955514,0.0010087364,0.0003772937],"category_scores_gemma":[0.0008692244,0.000426536,0.00033388662,0.0002001872,0.00032906796,0.000009352651,0.00035386631,0.0011939348,0.0005137342],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017160045,0.0002521154,0.015235254,0.002855632,0.003322629,0.018247327,0.0008056737,0.0000025822762,0.32420897,0.14025757,0.17234479,0.32229587],"study_design_scores_gemma":[0.0003221601,0.00037884308,0.00032533196,0.0005719768,0.00033924892,0.000119613724,0.0000012674207,0.00003273722,0.009589058,0.09620737,0.8916842,0.00042823039],"about_ca_topic_score_codex":0.0015812073,"about_ca_topic_score_gemma":0.0019289114,"teacher_disagreement_score":0.7193394,"about_ca_system_score_codex":0.00047696126,"about_ca_system_score_gemma":0.00047793737,"threshold_uncertainty_score":0.9998186},"labels":[],"label_agreement":null},{"id":"W4400913701","doi":"10.1007/978-1-0716-4027-2_20","title":"Optimized Ex Vivo Fluorospot Assay to Measure Multifunctional HBV-Specific T Cell Frequencies in Chronic Hepatitis B Patients","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto Rehabilitation Institute; University of Toronto; University Health Network","funders":"","keywords":"Ex vivo; Chronic hepatitis; Medicine; Hepatitis B; Virology; Hepatitis B virus; In vivo; Biology; Virus","score_opus":0.03435865121898912,"score_gpt":0.35621051297334294,"score_spread":0.3218518617543538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400913701","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15371315,0.013414358,0.82534647,0.0007207273,0.00181152,0.0013832027,0.000088246416,0.0001524037,0.003369908],"genre_scores_gemma":[0.13101622,0.0008380302,0.86649466,0.00066324463,0.00014249928,0.00032632565,0.00007045645,0.000068984176,0.0003796014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9962681,0.0014911261,0.0006254372,0.0007842983,0.00025244153,0.0005785925],"domain_scores_gemma":[0.9987531,0.00051154406,0.00005457931,0.0003918214,0.00016088305,0.00012809403],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0018176382,0.00033011817,0.000709933,0.00060162693,0.000048950413,0.000023079581,0.0001692238,0.00031462533,0.00041025924],"category_scores_gemma":[0.0011302172,0.00029925516,0.00016721716,0.0007656065,0.00016319097,0.000044273314,0.0001650602,0.0005251292,0.00011969535],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015861719,0.00019561141,0.12474223,0.00015468642,0.00010928204,0.00038411753,0.0006585404,0.00041137903,0.8293503,0.00070149545,0.0011218609,0.04201188],"study_design_scores_gemma":[0.010207603,0.0031805162,0.1647533,0.0013621211,0.0001990867,0.000052849777,0.00010013346,0.008240934,0.6052823,0.0036833144,0.20109214,0.0018457065],"about_ca_topic_score_codex":0.0016016726,"about_ca_topic_score_gemma":0.00095138245,"teacher_disagreement_score":0.224068,"about_ca_system_score_codex":0.0011076294,"about_ca_system_score_gemma":0.0002452346,"threshold_uncertainty_score":0.99994594},"labels":[],"label_agreement":null},{"id":"W4400913880","doi":"10.1007/978-1-0716-4027-2_21","title":"Ex Vivo Fluorescent Labeling of HBV-Specific B Cells in Chronic Hepatitis B Patients","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Schwartz/Reisman Emergency Medicine Institute; University Health Network","funders":"","keywords":"Ex vivo; Chronic hepatitis; Hepatitis B; Virology; Hepatitis B virus; Medicine; Molecular biology; In vivo; Biology; Virus; Genetics","score_opus":0.02601864269614593,"score_gpt":0.38087260059348427,"score_spread":0.3548539578973383,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4400913880","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7800749,0.029359186,0.18650049,0.00027241788,0.001490087,0.0009770386,0.000060709906,0.00007598782,0.0011892135],"genre_scores_gemma":[0.396407,0.0060458705,0.597017,0.00022209581,0.00008692574,0.00006902952,0.0000296467,0.000056884604,0.000065582986],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99768025,0.000750773,0.00059438014,0.00045559136,0.00012699781,0.00039199504],"domain_scores_gemma":[0.9992491,0.00025390487,0.000059690163,0.00031011837,0.00007445784,0.000052741438],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086615316,0.00019656023,0.000579196,0.00043370662,0.000015838443,0.0000062257127,0.00011885752,0.00019431354,0.000121277226],"category_scores_gemma":[0.000294791,0.00017814005,0.00010788125,0.0005382316,0.00016070828,0.00001982213,0.00014652849,0.00033648312,0.00002501457],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023999088,0.00009580117,0.11852419,0.000236446,0.000052841388,0.0001690644,0.00033071364,0.000021558531,0.83375037,0.0008789126,0.00012974942,0.045786355],"study_design_scores_gemma":[0.0012279681,0.00070287794,0.022088315,0.0007420141,0.000040245937,0.000005157644,0.00001535679,0.0012270476,0.95078105,0.0014381182,0.021470627,0.00026120382],"about_ca_topic_score_codex":0.001316941,"about_ca_topic_score_gemma":0.00068836875,"teacher_disagreement_score":0.4105165,"about_ca_system_score_codex":0.000431791,"about_ca_system_score_gemma":0.000114763694,"threshold_uncertainty_score":0.72643405},"labels":[],"label_agreement":null},{"id":"W4401374197","doi":"10.1007/978-1-0716-3995-5_24","title":"Electrospun Fibers for Use in Implantable Materials to Support Cell Therapy","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Electrospun Nanofibers in Biomedical Applications","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Materials science; Nanotechnology; Biomedical engineering; Medicine","score_opus":0.027719459219391066,"score_gpt":0.406452722674521,"score_spread":0.3787332634551299,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401374197","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16413121,0.00037516662,0.83336604,0.00035070293,0.0005145896,0.00090598693,0.00010914023,0.000083087594,0.00016408101],"genre_scores_gemma":[0.008495997,0.00009240522,0.9887442,0.0012965476,0.00005016017,0.0009788821,0.000083488645,0.000042076383,0.00021623357],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974046,0.0005773232,0.0004912072,0.00071674254,0.00008693541,0.00072320673],"domain_scores_gemma":[0.9988166,0.0006336273,0.000048915863,0.00037935184,0.0000307475,0.00009076182],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002536152,0.00020660163,0.0004073148,0.0003207526,0.00003876442,0.00009335,0.00041682803,0.00024723238,0.00023586217],"category_scores_gemma":[0.00009108982,0.00017956612,0.0000640295,0.0006709757,0.00010026667,0.00006030814,0.00009425137,0.00013053075,0.000065494096],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006917478,0.000047740807,0.00005898448,0.000027690805,0.0000055985106,0.000011150315,0.0000676402,0.0000030705698,0.9889933,0.004751408,0.0008462342,0.0051180157],"study_design_scores_gemma":[0.00031555395,0.00039360079,0.00002986594,0.000013820004,0.0000053494446,0.0000139823915,0.00000438495,0.000028222315,0.9474025,0.017829522,0.033764698,0.0001985215],"about_ca_topic_score_codex":0.00014594637,"about_ca_topic_score_gemma":0.000029812416,"teacher_disagreement_score":0.15563522,"about_ca_system_score_codex":0.00013733013,"about_ca_system_score_gemma":0.00012593306,"threshold_uncertainty_score":0.7322494},"labels":[],"label_agreement":null},{"id":"W4401374216","doi":"10.1007/978-1-0716-3995-5_21","title":"Synthesis of Hydrofluoric (HF) Acid Free, Two-Dimensional (2D) Tantalum Carbide MXene Nanosheets and Quantum Dots","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"MXene and MAX Phase Materials","field":"Materials Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Hydrofluoric acid; Tantalum; Tantalum carbide; Quantum dot; MXenes; Materials science; Carbide; Chemistry; Inorganic chemistry; Nanotechnology; Metallurgy","score_opus":0.019538598004588317,"score_gpt":0.3667822404932252,"score_spread":0.3472436424886369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401374216","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9665414,0.0059857965,0.024877276,0.00019445848,0.001458721,0.00021324215,0.000111200214,0.000069340145,0.00054857304],"genre_scores_gemma":[0.6489305,0.00008258477,0.35056427,0.00019368081,0.00007303349,0.000071498245,0.000010684069,0.000036295303,0.000037471127],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9967334,0.0015374972,0.0005560292,0.000631641,0.00013882326,0.00040257382],"domain_scores_gemma":[0.9987689,0.00051314983,0.000106675056,0.00048718596,0.000041534557,0.00008251837],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025163663,0.00024506086,0.00060582085,0.0002774016,0.00004618625,0.000037949583,0.000323332,0.00019973192,0.00037859633],"category_scores_gemma":[0.0008288735,0.0002043173,0.00008874959,0.00027832788,0.00028151216,0.00006013681,0.00038852866,0.00011354376,0.000021108428],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004149856,0.00003672404,0.00003386922,0.0001084724,0.000025947424,0.00013549825,0.00005405724,0.000021152713,0.98725045,0.0083047515,0.00007882914,0.0039087445],"study_design_scores_gemma":[0.00026022815,0.000107787266,0.000043500815,0.00009199327,0.000049903643,0.000068478934,0.000012034859,0.00042811426,0.9722138,0.025748363,0.0007625802,0.00021318332],"about_ca_topic_score_codex":0.00037632516,"about_ca_topic_score_gemma":0.000012070276,"teacher_disagreement_score":0.325687,"about_ca_system_score_codex":0.000034153483,"about_ca_system_score_gemma":0.000085703454,"threshold_uncertainty_score":0.8331818},"labels":[],"label_agreement":null},{"id":"W4401374310","doi":"10.1007/978-1-0716-3995-5_11","title":"A Method for Producing Induced Pluripotent Stem Cell-Derived Cardiomyocytes from Leigh Syndrome Patients for Its Application in Disease Modeling and Drug Validation","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Induced pluripotent stem cell; Disease; Drug; Neuroscience; Medicine; Computational biology; Biology; Pharmacology; Internal medicine; Embryonic stem cell; Genetics","score_opus":0.023915071604133423,"score_gpt":0.33906804935346213,"score_spread":0.3151529777493287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401374310","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43190685,0.001257972,0.5654301,0.00007075096,0.00026646003,0.000990367,0.000061894985,0.000011930937,0.0000036734466],"genre_scores_gemma":[0.4632184,0.000053709442,0.5344769,0.000116539515,0.00009135154,0.0011888277,0.00079179235,0.000037370104,0.00002514846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975676,0.00081819104,0.0003810659,0.0009239252,0.000050044182,0.00025917232],"domain_scores_gemma":[0.99929196,0.00019639134,0.000071837334,0.00027576313,0.000093134346,0.00007094047],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092887005,0.00020624425,0.0003012028,0.00017728783,0.00004566483,0.000023203791,0.00011809042,0.00023882763,0.0000011679678],"category_scores_gemma":[0.00027704227,0.00020432078,0.000112959104,0.00013976046,0.000019896379,0.000007067738,0.000088905224,0.00011739526,7.465261e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022197039,0.00003993648,0.00047277368,0.00011145344,0.0000336043,0.0000023350512,0.00016326943,0.0032997623,0.9776327,0.00013560856,0.0000051658653,0.0178814],"study_design_scores_gemma":[0.0014880381,0.0002668585,0.0001234699,0.00004610173,0.0000829616,0.000003431443,0.00007557507,0.10519525,0.88753146,0.0029012193,0.0019365036,0.00034916055],"about_ca_topic_score_codex":0.00005348505,"about_ca_topic_score_gemma":0.000015781277,"teacher_disagreement_score":0.10189548,"about_ca_system_score_codex":0.000037615027,"about_ca_system_score_gemma":0.00006716838,"threshold_uncertainty_score":0.833196},"labels":[],"label_agreement":null},{"id":"W4401374482","doi":"10.1007/978-1-0716-3995-5_15","title":"Isolation and Characterization of Extracellular Vesicles from Cell Culture Media","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Libin Cardiovascular Institute of Alberta; University of Calgary","funders":"","keywords":"Isolation (microbiology); Extracellular vesicles; Characterization (materials science); Vesicle; Cell biology; Chemistry; Biology; Microbiology; Materials science; Nanotechnology; Biochemistry","score_opus":0.010599919005402882,"score_gpt":0.31692331027830506,"score_spread":0.3063233912729022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401374482","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.50440925,0.015805576,0.47934228,0.000031855594,0.00016385838,0.00010707223,0.000050653238,0.000012392011,0.00007704043],"genre_scores_gemma":[0.6217313,0.00068586465,0.37639275,0.0000688729,0.000121012585,0.000020284791,0.00083528203,0.000036592246,0.000108094195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823964,0.0006226207,0.00035417272,0.0005228974,0.000067071975,0.00019360185],"domain_scores_gemma":[0.9994211,0.00006358513,0.000088191824,0.00032162276,0.0000400528,0.0000654566],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005074844,0.0001857337,0.00021397466,0.00010853631,0.000020653295,0.00002071957,0.00016443363,0.00034593066,0.000025363965],"category_scores_gemma":[0.00016126326,0.00018030849,0.00008274749,0.00017021454,0.00015658584,0.000006971149,0.00012432781,0.00014698713,0.0000028954373],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035497247,0.000041848223,0.0015604603,0.00005125584,0.000029065071,0.000017986718,0.00024529838,0.000005986757,0.9834799,0.0009149433,0.000010137097,0.013607633],"study_design_scores_gemma":[0.00025244552,0.00008979071,0.0014143056,0.000032291224,0.000037264646,0.0000044133835,0.000048914262,0.0010537675,0.9881939,0.0045850896,0.0040992573,0.0001885403],"about_ca_topic_score_codex":0.00001527676,"about_ca_topic_score_gemma":0.0000038575813,"teacher_disagreement_score":0.11732198,"about_ca_system_score_codex":0.000011291007,"about_ca_system_score_gemma":0.000043213582,"threshold_uncertainty_score":0.7352767},"labels":[],"label_agreement":null},{"id":"W4401376214","doi":"10.1007/978-1-0716-3995-5_10","title":"iPSC-Based Disease Modeling and Functional Assessment of Neurons in Patients with Metabolic Disorder","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Diet and metabolism studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; St. Boniface Hospital","funders":"","keywords":"Disease; Neuroscience; Medicine; Biology; Internal medicine","score_opus":0.022568424925396128,"score_gpt":0.3842958198958567,"score_spread":0.3617273949704606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401376214","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5219581,0.004234659,0.4730952,0.00027313118,0.0001298853,0.00019046765,0.0000072950675,0.000010490442,0.00010072737],"genre_scores_gemma":[0.75701255,0.00009597316,0.24248397,0.00028262098,0.00001342419,0.000053882377,0.000030737352,0.000015740823,0.0000110990795],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9989802,0.00029836036,0.00020622391,0.00027176435,0.000086664746,0.00015675547],"domain_scores_gemma":[0.99963504,0.000114570306,0.000022529419,0.0001325852,0.00004271904,0.000052538497],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00038101475,0.00011827451,0.0003322122,0.0002641595,0.000012877867,0.0000040850773,0.000027219032,0.000043820473,0.000010258895],"category_scores_gemma":[0.00017524637,0.00008447585,0.000046199584,0.00025989668,0.000089677735,0.000017582563,0.000043500124,0.00015236098,1.8788629e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00032255688,0.00036809492,0.9557614,0.00017230972,0.000118772165,0.000027507467,0.000055940738,0.0038976283,0.0063118045,0.008428807,0.000004552947,0.024530627],"study_design_scores_gemma":[0.001878546,0.00017838285,0.9344051,0.000076553035,0.0001851019,2.5428028e-7,0.000019010222,0.060764518,0.00012595962,0.0012323436,0.0010235071,0.00011073501],"about_ca_topic_score_codex":0.000022624605,"about_ca_topic_score_gemma":0.000006083751,"teacher_disagreement_score":0.23505442,"about_ca_system_score_codex":0.000010084336,"about_ca_system_score_gemma":0.00010164072,"threshold_uncertainty_score":0.3444825},"labels":[],"label_agreement":null},{"id":"W4401510148","doi":"10.1007/978-1-0716-3969-6","title":"Neuronal Morphogenesis","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Medical Sciences, Newcastle University; Department of Biological Sciences, Purdue University; College of Medicine, Drexel University; Perelman School of Medicine, University of Pennsylvania; University of North Carolina at Chapel Hill; Directorate for Biological Sciences; University of Pennsylvania; Indian Institute of Science Education and Research Mohali; Istituto Italiano di Tecnologia; Fakultet Medicinskih Nauka, Univerziteta U Kragujevcu; Indian Institute of Science Education and Research Pune; Buddhist Tzu Chi Medical Foundation; Hunan University; University of New South Wales; Sorbonne Université; RWTH Aachen University; University of California, Davis; Shanghai Educational Development Foundation; NYU Grossman School of Medicine; Institut National de la Santé et de la Recherche Médicale; Newcastle University; Indian Institute of Science; University of Nebraska Medical Center; Institute of Science and Technology Austria; School of Veterinary Medicine, University of California, Davis; Anschutz Medical Campus, University of Colorado; Birck Nanotechnology Center, Purdue University; Universidade Estadual Paulista; St. Jude Children's Research Hospital; Drexel University; Johns Hopkins University; York University; Purdue University","keywords":"Morphogenesis; Neuroscience; Biology; Genetics; Gene","score_opus":0.014674191056386655,"score_gpt":0.34663082020367003,"score_spread":0.33195662914728336,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401510148","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014345187,0.03208479,0.79764247,0.0002714343,0.0024825155,0.00082504656,0.00032861048,0.00007422078,0.1648564],"genre_scores_gemma":[0.00006132523,0.0022362496,0.4623851,0.002056937,0.00080865016,0.00016233274,0.0023539132,0.00033791398,0.5295976],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9969767,0.00063227303,0.0005393807,0.001228084,0.00009765921,0.0005259311],"domain_scores_gemma":[0.99878585,0.000050990035,0.00013792283,0.00086312334,0.00006277572,0.00009934921],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0007234987,0.0005684961,0.0006002131,0.00031315617,0.000031029027,0.000027212513,0.00058673014,0.0015086373,0.00008176016],"category_scores_gemma":[0.00015060489,0.0005757903,0.0004362562,0.00012466751,0.00022144362,0.0000010249173,0.0006119583,0.0006149754,0.00008613167],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029950414,0.000029308765,0.000023936342,0.00009237535,0.00018437195,0.00008098173,0.000008303218,0.000024921934,0.9718587,0.006051916,0.00959942,0.0120158205],"study_design_scores_gemma":[0.00022426574,0.00022584078,0.0000065017603,0.000054331977,0.00009748986,0.000064065505,0.0000024318138,0.000046258912,0.19290869,0.0129934205,0.79280865,0.0005680266],"about_ca_topic_score_codex":0.000013935425,"about_ca_topic_score_gemma":0.00003247111,"teacher_disagreement_score":0.78320926,"about_ca_system_score_codex":0.00008070535,"about_ca_system_score_gemma":0.00046304084,"threshold_uncertainty_score":0.9997876},"labels":[],"label_agreement":null},{"id":"W4401905192","doi":"10.1007/978-1-0716-4108-8_7","title":"CRISPR-Mediated Library Screening of Gene-Knockout Cell Lines for Investigating Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CRISPR; Innate immune system; Biology; Functional genomics; Computational biology; Genome editing; Gene; Forward genetics; Immunity; Intrinsic immunity; Immune system; Genetics; Genomics; Genome","score_opus":0.02105414676460726,"score_gpt":0.4040182548027716,"score_spread":0.38296410803816433,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905192","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22822253,0.0074649476,0.7634659,0.00007192534,0.00024684364,0.00021268766,0.00005417403,0.00003466927,0.00022633793],"genre_scores_gemma":[0.27452734,0.00016152581,0.7245831,0.0001452346,0.000103909435,0.00004313625,0.0003111355,0.000052437037,0.000072171664],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998323,0.00041837976,0.00043642087,0.00043271424,0.000049462236,0.00034000608],"domain_scores_gemma":[0.9993283,0.00018267747,0.00007108103,0.0003240521,0.000038023412,0.000055876197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007442005,0.0002248996,0.00030182407,0.00019739989,0.00003455043,0.000020984715,0.00027332536,0.00030972908,0.000005470709],"category_scores_gemma":[0.00048477226,0.0002225723,0.00016603316,0.0003030319,0.00012839983,0.0000059759795,0.00019762044,0.00021477975,8.189144e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022842938,0.000019573134,0.001348235,0.00016626844,0.000050566836,0.000005550478,0.00007689626,0.0005126042,0.9848942,0.00015363368,0.000058047128,0.0126915425],"study_design_scores_gemma":[0.00034136898,0.00021682057,0.0002774694,0.00005143957,0.000022784709,0.0000057471875,0.000052560365,0.006669507,0.985903,0.000748412,0.0054756,0.0002352643],"about_ca_topic_score_codex":0.00001958636,"about_ca_topic_score_gemma":0.0000030648748,"teacher_disagreement_score":0.04630483,"about_ca_system_score_codex":0.0000050662143,"about_ca_system_score_gemma":0.000076600154,"threshold_uncertainty_score":0.9076235},"labels":[],"label_agreement":null},{"id":"W4401905203","doi":"10.1007/978-1-0716-4108-8_6","title":"CRISPR-Mediated Viral Gene Knockout to Investigate Viral Evasion of Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CRISPR; Biology; Innate immune system; Gene; Acquired immune system; Genome editing; Immune system; Herpes simplex virus; Virology; Evasion (ethics); Computational biology; Virus; Genetics","score_opus":0.01541367251747511,"score_gpt":0.41249665348794856,"score_spread":0.39708298097047345,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905203","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49173537,0.002459484,0.5049272,0.0000929501,0.00036837434,0.00017825623,0.00002861791,0.00002518304,0.00018452408],"genre_scores_gemma":[0.69744664,0.00015284697,0.30174333,0.00028158276,0.00007899046,0.00003504839,0.00015180722,0.000045310484,0.000064469816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977062,0.0007220535,0.00047873115,0.0005648649,0.000090996604,0.0004371498],"domain_scores_gemma":[0.9992129,0.00006537488,0.000051083964,0.0005078312,0.000056844114,0.00010592772],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0011195106,0.0002820497,0.0003670367,0.00030859848,0.000030813208,0.000017846512,0.00034361382,0.00035231924,0.000010877831],"category_scores_gemma":[0.00059210573,0.00027378454,0.00015924306,0.00039451744,0.00015286992,0.000004120602,0.00038453555,0.00029037346,0.000010972394],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052443902,0.000030908242,0.0005738993,0.00005428825,0.00006330672,0.000022889979,0.000099851975,0.0004421516,0.98329693,0.0003314911,0.000051793544,0.014980055],"study_design_scores_gemma":[0.0003158348,0.0004626876,0.0008624852,0.000039590635,0.000022492019,0.000014249637,0.000020115374,0.0013351421,0.98860836,0.0011354468,0.006886011,0.0002976081],"about_ca_topic_score_codex":0.0000876961,"about_ca_topic_score_gemma":0.00001608077,"teacher_disagreement_score":0.20571125,"about_ca_system_score_codex":0.000025040325,"about_ca_system_score_gemma":0.00008041956,"threshold_uncertainty_score":0.99997145},"labels":[],"label_agreement":null},{"id":"W4401905205","doi":"10.1007/978-1-0716-4108-8_10","title":"Transcriptomics in the Study of Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Transcriptome; Biology; Computational biology; Innate immune system; DNA microarray; RNA; Organism; RNA-Seq; Gene; Genetics; Gene expression; Immune system","score_opus":0.026657486498982915,"score_gpt":0.374997926053741,"score_spread":0.3483404395547581,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905205","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9136067,0.003791705,0.07688838,0.00016162141,0.0031141946,0.00039319668,0.0000020187235,0.000027453765,0.0020147157],"genre_scores_gemma":[0.99667025,0.000061169805,0.0028195453,0.00017408276,0.00000565621,0.00003484117,0.000023743452,0.000009906481,0.00020079818],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99461067,0.0045905863,0.00038133957,0.0002131245,0.000014982158,0.00018931962],"domain_scores_gemma":[0.99934334,0.00032512532,0.000043740445,0.00026649103,0.000018485513,0.000002802452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002008728,0.00011906437,0.00024772072,0.00031260893,0.000031428495,0.000008206668,0.0002501622,0.0001949183,0.00010792217],"category_scores_gemma":[0.0001308576,0.00008464796,0.0000776354,0.00041949647,0.00012055946,0.000036639634,0.000041914944,0.0006683991,0.000023760142],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010296018,0.00032861895,0.0012257014,0.000012406101,0.00006709886,0.000013164465,0.00344938,0.0000059665335,0.97423786,0.0024084642,0.000059989114,0.018088413],"study_design_scores_gemma":[0.0025333657,0.0019771296,0.009243628,0.00006937938,0.000077724675,0.0000867898,0.011661523,0.00019202984,0.9100266,0.0035554601,0.060247757,0.00032860684],"about_ca_topic_score_codex":0.00042269044,"about_ca_topic_score_gemma":0.000057747846,"teacher_disagreement_score":0.08306354,"about_ca_system_score_codex":0.000025150679,"about_ca_system_score_gemma":0.000022748103,"threshold_uncertainty_score":0.34518436},"labels":[],"label_agreement":null},{"id":"W4401905207","doi":"10.1007/978-1-0716-4108-8_15","title":"Investigation of Protein Lysine Acetylation in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Acetylation; Innate immune system; Lysine; Biology; Interferon; Context (archaeology); Immunoprecipitation; Antiviral protein; Virology; Antibody; Biochemistry; Immunology; Amino acid; Gene; Immune system; RNA","score_opus":0.0258410897155969,"score_gpt":0.3676927135981233,"score_spread":0.3418516238825264,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905207","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8948445,0.00641213,0.097311884,0.0002963773,0.00038408424,0.00028035932,0.000006595254,0.00003467575,0.00042942367],"genre_scores_gemma":[0.9556835,0.000044226486,0.043779146,0.000074641604,0.0000053992876,0.000037784084,0.000076822536,0.000013988749,0.00028443555],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99516463,0.0039067073,0.00044387567,0.00024132953,0.000014683403,0.00022874554],"domain_scores_gemma":[0.99944586,0.00021908114,0.00007165884,0.00021654837,0.00004092347,0.000005932432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018286951,0.00013705445,0.0003083645,0.00054926024,0.00001963879,0.000006195637,0.00016042053,0.0003321284,0.000071615614],"category_scores_gemma":[0.00058241916,0.00012321342,0.0000709255,0.000505883,0.00029472998,0.00005291724,0.00009907611,0.00043824062,0.000025562193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001530606,0.00002001444,0.001168845,0.000040603598,0.000039297956,0.0000071475856,0.00037756556,0.0000030993465,0.9691587,0.0073062214,0.0000068719614,0.021718534],"study_design_scores_gemma":[0.0004326714,0.00021500236,0.003168171,0.00013562432,0.000007879079,0.000010348753,0.00006711661,0.00010332145,0.98788595,0.006340406,0.0015188345,0.00011467981],"about_ca_topic_score_codex":0.00023127686,"about_ca_topic_score_gemma":0.00002042796,"teacher_disagreement_score":0.060839087,"about_ca_system_score_codex":0.000048736343,"about_ca_system_score_gemma":0.00007545623,"threshold_uncertainty_score":0.50244975},"labels":[],"label_agreement":null},{"id":"W4401905211","doi":"10.1007/978-1-0716-4108-8_18","title":"Cryo-Electron Microscopy in the Study of Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Cryo-electron microscopy; Resolution (logic); Electron microscope; Innate immune system; Nanotechnology; Computational biology; Microscopy; Biology; Biological system; Computer science; Materials science; Biophysics; Artificial intelligence; Physics; Immunology; Optics; Immune system","score_opus":0.02014226598728872,"score_gpt":0.4189054091247764,"score_spread":0.3987631431374877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905211","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.972915,0.011386607,0.013841166,0.0001372215,0.0006004951,0.00041854088,0.000005564869,0.000024303947,0.0006711041],"genre_scores_gemma":[0.9948508,0.0000913032,0.004649845,0.00015596102,0.0000054755324,0.000049386133,0.000017044207,0.000015657037,0.00016449374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.98944503,0.009395403,0.00045590597,0.0003048406,0.000019937874,0.00037885382],"domain_scores_gemma":[0.99881357,0.00068302493,0.00005870184,0.0004177546,0.000022616643,0.000004309527],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0028986263,0.00018485125,0.00040585513,0.00041821372,0.000043200413,0.000012616823,0.00050433766,0.0002615685,0.000053010976],"category_scores_gemma":[0.0002975373,0.00012806233,0.00009158894,0.00051740295,0.00026800085,0.00002769522,0.00015167269,0.0008169246,0.000025598767],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003066476,0.00037951517,0.0015389592,0.000018857558,0.000078889265,0.00003513,0.0027565972,0.0000012562608,0.9830272,0.0021260146,0.000033309014,0.009697596],"study_design_scores_gemma":[0.00085668307,0.0016759599,0.0041857413,0.000039364422,0.000024629262,0.000043263874,0.0016468734,0.0000072499647,0.98433936,0.0012827077,0.005751151,0.000146991],"about_ca_topic_score_codex":0.00053635234,"about_ca_topic_score_gemma":0.00008096128,"teacher_disagreement_score":0.021935837,"about_ca_system_score_codex":0.00003615448,"about_ca_system_score_gemma":0.00006066943,"threshold_uncertainty_score":0.522223},"labels":[],"label_agreement":null},{"id":"W4401905215","doi":"10.1007/978-1-0716-4108-8_5","title":"Identifying a Ubiquitinated Adaptor Protein by a Viral E3 Ligase Through Co-immunoprecipitation","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunoprecipitation; Ubiquitin; Signal transducing adaptor protein; Ubiquitin ligase; Chemistry; Viral protein; Protein detection; Cell biology; Molecular biology; Biology; Virology; Biochemistry; Virus; Phosphorylation; Nanotechnology; Materials science; Gene","score_opus":0.027790383578632817,"score_gpt":0.39860675794295913,"score_spread":0.3708163743643263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905215","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36073822,0.009162086,0.62716895,0.00018364454,0.00025779541,0.0006415659,0.0000944185,0.0000759904,0.001677307],"genre_scores_gemma":[0.33382294,0.00022391605,0.6623853,0.0006725661,0.00018221754,0.00069311657,0.0009891684,0.00010706633,0.0009237573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99658346,0.0015188784,0.00046629074,0.0008065158,0.000110858135,0.00051397656],"domain_scores_gemma":[0.99928695,0.00006161444,0.00009159631,0.00042966718,0.00006147068,0.0000686991],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013584428,0.00031526433,0.00030597296,0.00013679921,0.00007651224,0.00007927298,0.000334752,0.00047910985,0.000053552623],"category_scores_gemma":[0.0004172069,0.00031316828,0.0001731225,0.00028723595,0.0001733595,0.000012058005,0.00017339559,0.0003624026,0.00002847185],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008308928,0.0000525384,0.000023385162,0.00008447347,0.000076230994,0.00005207247,0.00019464803,0.0000033213294,0.98293203,0.0040241787,0.00035229803,0.012121742],"study_design_scores_gemma":[0.00043349032,0.00042161075,0.000007958717,0.000095952295,0.000017432314,0.000035475117,0.00007518627,0.00017742119,0.95079595,0.010103411,0.037489787,0.00034635543],"about_ca_topic_score_codex":0.000060692768,"about_ca_topic_score_gemma":0.0000041267203,"teacher_disagreement_score":0.03713749,"about_ca_system_score_codex":0.000049184386,"about_ca_system_score_gemma":0.00011316943,"threshold_uncertainty_score":0.99993205},"labels":[],"label_agreement":null},{"id":"W4401905222","doi":"10.1007/978-1-0716-4108-8_13","title":"DNA PAMPs as Molecular Tools for the cGAS-STING Signaling Pathways","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Stimulator of interferon genes; Pattern recognition receptor; Sting; Cell biology; RIG-I; Context (archaeology); Pathogen-associated molecular pattern; Immunity; DNA; Immune system; Immunology; Genetics","score_opus":0.046973180365442,"score_gpt":0.39251673331408177,"score_spread":0.34554355294863975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905222","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.075879656,0.03824523,0.881591,0.0007137351,0.0018279769,0.0005986315,0.000032317443,0.00012918269,0.000982246],"genre_scores_gemma":[0.7505376,0.00024531098,0.24360806,0.0029501645,0.00010268373,0.0006769442,0.00016475377,0.00013554154,0.0015789861],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.995915,0.002353638,0.00050167297,0.0005564162,0.000026844866,0.000646424],"domain_scores_gemma":[0.9950094,0.0043837526,0.000076372016,0.00044725227,0.00006396951,0.000019254934],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027696835,0.0002925593,0.00041475683,0.00023257718,0.00016494808,0.00007854443,0.000500085,0.00047106197,0.0002859602],"category_scores_gemma":[0.0029228085,0.00020824523,0.00032065547,0.000274959,0.00030077575,0.000053404405,0.00019745641,0.0005819911,0.00013528402],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016388083,0.000022553919,0.0000073419264,0.000032971097,0.00022814702,0.000059068665,0.0002527169,0.000029497029,0.85384834,0.05052379,0.000067352055,0.094764315],"study_design_scores_gemma":[0.00042340934,0.00033555223,0.000011972315,0.00007426621,0.00005535209,0.00017806515,0.0003293131,0.00016503014,0.8751525,0.010096991,0.11294622,0.00023127957],"about_ca_topic_score_codex":0.000041620413,"about_ca_topic_score_gemma":0.000002298891,"teacher_disagreement_score":0.6746579,"about_ca_system_score_codex":0.00005647389,"about_ca_system_score_gemma":0.00012962098,"threshold_uncertainty_score":0.8491994},"labels":[],"label_agreement":null},{"id":"W4401905224","doi":"10.1007/978-1-0716-4108-8_11","title":"Application of Proteomics Technology Based on LC-MS Combined with Western Blotting and Co-IP in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Proteomics; Innate immune system; Proteome; Biology; Immune system; Quantitative proteomics; Acquired immune system; Interferon; Computational biology; Immunology; Bioinformatics; Biochemistry","score_opus":0.010370589175085931,"score_gpt":0.3460673469763449,"score_spread":0.33569675780125896,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905224","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72147,0.001041191,0.2764354,0.00026522763,0.000083944935,0.00044321493,0.000009028302,0.000049086222,0.00020288005],"genre_scores_gemma":[0.9343766,0.000026621225,0.06526983,0.00011229319,0.0000023447083,0.00010991327,0.000042358693,0.000021512455,0.00003852765],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99737597,0.0015888388,0.00037383373,0.0003575082,0.000016975646,0.00028688426],"domain_scores_gemma":[0.9991847,0.00035725793,0.0000969139,0.00032356783,0.000030276511,0.0000072858456],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012288203,0.00019250927,0.00042494337,0.00079073186,0.00003392745,0.0000075808643,0.00020588347,0.00043753706,0.000008268398],"category_scores_gemma":[0.00021224022,0.00015768339,0.000039565784,0.00044684624,0.0005291702,0.000022590817,0.00008950935,0.0006227601,0.000007858539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010346164,0.00010463341,0.015373779,0.000055914978,0.00004504445,0.000013820832,0.000109892586,0.000012511719,0.955703,0.0031606813,9.129524e-7,0.024385184],"study_design_scores_gemma":[0.0013463523,0.0016031032,0.003943641,0.00016276614,0.000013522912,0.00003179097,0.00007399518,0.00082098425,0.99005103,0.0009563955,0.00082659454,0.00016980217],"about_ca_topic_score_codex":0.00010015158,"about_ca_topic_score_gemma":0.000022774595,"teacher_disagreement_score":0.2129066,"about_ca_system_score_codex":0.000038939765,"about_ca_system_score_gemma":0.00006195247,"threshold_uncertainty_score":0.6430142},"labels":[],"label_agreement":null},{"id":"W4401905228","doi":"10.1007/978-1-0716-4108-8_17","title":"Phagosome Isolation with Magnetic Beads and Purification of Toll-Like Receptor (TLR) Complexes in Phagosomes","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Phagosome; Endosome; Innate immune system; Cell biology; Phagocytosis; TLR3; Toll-like receptor; Biology; Macrophage; Chemistry; Immune system; Immunology; Biochemistry; Intracellular","score_opus":0.012653379273850646,"score_gpt":0.3272520302717272,"score_spread":0.3145986509978766,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905228","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7910008,0.03192259,0.1757122,0.00037784345,0.00034365937,0.00036212016,0.000007708431,0.000038124184,0.0002349763],"genre_scores_gemma":[0.8312253,0.00080064865,0.16714583,0.00008472695,0.000014681658,0.00009819667,0.00022362704,0.000027755925,0.0003792521],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975703,0.0014931667,0.00039982883,0.00030562523,0.000019663836,0.00021144943],"domain_scores_gemma":[0.999356,0.0003343549,0.000076178556,0.00019142717,0.0000332243,0.000008824421],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009108662,0.00014518271,0.00030422636,0.00046576394,0.000026122794,0.000009871105,0.000106235224,0.0002593155,0.00011165145],"category_scores_gemma":[0.00010747719,0.00012209862,0.000035966536,0.00033846137,0.00025094138,0.000070942006,0.000041068277,0.0002163046,0.000016955999],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020494887,0.000033338772,0.0019480116,0.00005140738,0.00003383645,0.0000040937375,0.00035482208,0.0000066623907,0.91990596,0.007119471,0.000013469379,0.070324],"study_design_scores_gemma":[0.000918329,0.00056351314,0.0061671715,0.000107843465,0.0000266632,0.000053288564,0.00019135434,0.00023353471,0.98158616,0.0019717035,0.00799987,0.00018055853],"about_ca_topic_score_codex":0.00007609847,"about_ca_topic_score_gemma":0.000022401826,"teacher_disagreement_score":0.07014345,"about_ca_system_score_codex":0.000041717438,"about_ca_system_score_gemma":0.000047282752,"threshold_uncertainty_score":0.49790373},"labels":[],"label_agreement":null},{"id":"W4401905230","doi":"10.1007/978-1-0716-4108-8_2","title":"A Guideline Strategy for Identifying a Viral Gene/Protein Evading Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Interferon; Immunity; Intrinsic immunity; Endoplasmic reticulum; Virology; Acquired immune system; Gene; Immune system; Immunology; Cell biology; Genetics","score_opus":0.059118880664371896,"score_gpt":0.4431482218500036,"score_spread":0.3840293411856317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905230","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17450543,0.017160505,0.80575866,0.00019844939,0.0012018526,0.00052143825,0.00004430144,0.00012001797,0.00048933085],"genre_scores_gemma":[0.64659786,0.00007613336,0.3505965,0.00032657906,0.00004946138,0.00022917177,0.00026767812,0.00006663713,0.0017900248],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99515027,0.002902166,0.0007298658,0.00054319244,0.000021989264,0.0006524988],"domain_scores_gemma":[0.9990534,0.00038657011,0.000091102775,0.00037840314,0.00007384431,0.00001667794],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003200674,0.00030086798,0.0005006771,0.00051322207,0.00012751608,0.000053120955,0.00040138862,0.0005068743,0.00015542962],"category_scores_gemma":[0.0007065313,0.00027135256,0.00026571745,0.00029367686,0.00026160356,0.00008000291,0.00022817067,0.00070307887,0.000071742084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031927633,0.000040946772,0.000016153366,0.00004895853,0.00019013544,0.00003418523,0.00014395668,0.000007306687,0.9309194,0.014660896,0.00011183098,0.053506926],"study_design_scores_gemma":[0.0007907575,0.0004743379,0.00003088228,0.00009605379,0.000036357695,0.0000780028,0.00013130587,0.00046111876,0.9560295,0.012904873,0.028672284,0.00029455766],"about_ca_topic_score_codex":0.00018986888,"about_ca_topic_score_gemma":0.000012291154,"teacher_disagreement_score":0.47209242,"about_ca_system_score_codex":0.00008686849,"about_ca_system_score_gemma":0.00014384651,"threshold_uncertainty_score":0.9999739},"labels":[],"label_agreement":null},{"id":"W4401905240","doi":"10.1007/978-1-0716-4108-8_12","title":"Identifying RNA Sensors in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; RNA; Biology; Pattern recognition receptor; Virology; RIG-I; Nucleic acid; Virus; Pathogen; Immunity; RNA virus; TLR7; Context (archaeology); Immune system; Toll-like receptor; Immunology; Gene; Genetics","score_opus":0.030909092347531458,"score_gpt":0.40534451963869084,"score_spread":0.37443542729115936,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905240","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8413711,0.021525564,0.13092598,0.00025070037,0.0024178266,0.00022734414,0.0000108750355,0.00011315678,0.003157431],"genre_scores_gemma":[0.9594991,0.00029974512,0.03856127,0.0002049876,0.0000124041035,0.00003073597,0.000042906526,0.00003350803,0.0013153366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9933786,0.0051962505,0.0004696834,0.0004184163,0.00001696135,0.00052013237],"domain_scores_gemma":[0.9990822,0.0005074857,0.000046724133,0.00033232948,0.00002065899,0.000010568391],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022020943,0.00022430673,0.00041675003,0.00074047875,0.000049065562,0.00002553564,0.0003095761,0.00045379426,0.00020037877],"category_scores_gemma":[0.0005069791,0.00020386591,0.00013981768,0.0005011909,0.00029560179,0.000058858448,0.00023761205,0.0009568456,0.00023390382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013311092,0.000043732052,0.0004616227,0.00002802364,0.00007546001,0.00014942672,0.00052380457,0.000003018544,0.955452,0.0063875206,0.00003462625,0.03670762],"study_design_scores_gemma":[0.00051897496,0.0001376217,0.0014405922,0.00011929681,0.0000125464885,0.000087559354,0.00025984595,0.00006106012,0.979796,0.004302967,0.013026317,0.00023725267],"about_ca_topic_score_codex":0.00028972267,"about_ca_topic_score_gemma":0.0000272212,"teacher_disagreement_score":0.11812799,"about_ca_system_score_codex":0.00008002853,"about_ca_system_score_gemma":0.00006270505,"threshold_uncertainty_score":0.8313411},"labels":[],"label_agreement":null},{"id":"W4401905253","doi":"10.1007/978-1-0716-4108-8_8","title":"CRISPR-Mediated Construction of Gene-Knockout Mice for Investigating Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CRISPR; Innate immune system; Biology; Gene knockout; Genome editing; Gene; Cas9; Immune system; Computational biology; Knockout mouse; Gene targeting; Immunity; Acquired immune system; Function (biology); Genetics","score_opus":0.01750498023665204,"score_gpt":0.41634626980106043,"score_spread":0.3988412895644084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905253","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30955613,0.0025468704,0.68713313,0.00004592187,0.0003656343,0.00017568213,0.00003488467,0.00001768905,0.00012405963],"genre_scores_gemma":[0.28567004,0.00010112848,0.7138355,0.000075647404,0.00006565732,0.00004137986,0.00016510904,0.000028236549,0.000017333645],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985821,0.00037190926,0.00036955604,0.0003668755,0.000042274987,0.00026726784],"domain_scores_gemma":[0.9994637,0.00012569375,0.000062417486,0.0002474106,0.00006150919,0.00003927622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00088301185,0.0001739286,0.0002472134,0.00015726907,0.000029040295,0.00001070828,0.00016964535,0.00027371573,0.0000032301461],"category_scores_gemma":[0.0007533915,0.00017744378,0.00012305804,0.00023756851,0.00022845762,0.0000027213623,0.00008599928,0.0001691249,8.2889653e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018057743,0.000011888014,0.0006311716,0.000101550344,0.00006312465,0.0000023860978,0.0000804893,0.00015634962,0.9833299,0.0008566512,0.00001611408,0.014732306],"study_design_scores_gemma":[0.00029991977,0.00018310515,0.00018609836,0.00003398838,0.000023403589,0.000018916871,0.000088075714,0.0028208578,0.99090654,0.0019634098,0.0032918148,0.00018387508],"about_ca_topic_score_codex":0.000033762983,"about_ca_topic_score_gemma":0.000009044291,"teacher_disagreement_score":0.026702352,"about_ca_system_score_codex":0.000013552185,"about_ca_system_score_gemma":0.00007311696,"threshold_uncertainty_score":0.7235948},"labels":[],"label_agreement":null},{"id":"W4401905262","doi":"10.1007/978-1-0716-4108-8_1","title":"A Guideline Strategy for Identifying Genes/Proteins Regulating Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Ubiquitin; Ubiquitin ligase; Interferon; Biology; Interferon regulatory factors; Signal transduction; Cell biology; Gene; Stimulator of interferon genes; Computational biology; Genetics; Receptor","score_opus":0.06512919121542797,"score_gpt":0.4432405602897405,"score_spread":0.37811136907431253,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905262","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.077010304,0.026267873,0.89385086,0.00020824456,0.0013198355,0.00048967404,0.00003324275,0.00012789012,0.0006920982],"genre_scores_gemma":[0.4276049,0.00014813393,0.5694684,0.00031915377,0.00005899459,0.00019847056,0.00030267067,0.00007413767,0.0018251244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9954964,0.0026681158,0.0007354152,0.00050386,0.000020036538,0.0005761702],"domain_scores_gemma":[0.99890095,0.0005125312,0.00009706958,0.00039453222,0.000080903184,0.000013987279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031362458,0.00027031393,0.00046252643,0.0004171496,0.00013362069,0.00004404258,0.00034782893,0.0004760522,0.00015639697],"category_scores_gemma":[0.000664662,0.00024183125,0.00023083125,0.0003189597,0.000247246,0.00006570835,0.0002177539,0.0005280861,0.000045342123],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001867253,0.000031178864,0.000027827227,0.000051239662,0.00014391911,0.000015102213,0.00015268302,0.000014903005,0.8541424,0.011158719,0.00009901135,0.13397627],"study_design_scores_gemma":[0.0006759376,0.00036219615,0.000054317872,0.000095949064,0.00003325421,0.00007481132,0.00023564356,0.00059376523,0.95001686,0.008500958,0.039086826,0.00026945723],"about_ca_topic_score_codex":0.00018993489,"about_ca_topic_score_gemma":0.000018403538,"teacher_disagreement_score":0.3505946,"about_ca_system_score_codex":0.00006543479,"about_ca_system_score_gemma":0.000118765085,"threshold_uncertainty_score":0.9861592},"labels":[],"label_agreement":null},{"id":"W4401905272","doi":"10.1007/978-1-0716-4108-8_4","title":"Identifying an Abnormal Phosphorylated Adaptor by Viral Kinase Using Mass Spectrometry","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunoprecipitation; Phosphorylation; Mass spectrometry; Signal transducing adaptor protein; Fragmentation (computing); Chemistry; Protein phosphorylation; Kinase; Computational biology; Cell biology; Biology; Molecular biology; Protein kinase A; Biochemistry; Chromatography; Gene","score_opus":0.02544217286245426,"score_gpt":0.38448930453070973,"score_spread":0.35904713166825547,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905272","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3293343,0.027708936,0.64080024,0.00003843557,0.0015436125,0.00013649598,0.00003581348,0.0001127644,0.00028939816],"genre_scores_gemma":[0.53816646,0.00017106919,0.45926055,0.00036779157,0.000046172714,0.000044075397,0.00024333254,0.000091914764,0.0016086492],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99528253,0.0029637585,0.00046515837,0.0006054504,0.00002752483,0.00065558945],"domain_scores_gemma":[0.9992813,0.0002134875,0.00006628992,0.00037382403,0.000032050266,0.000033057077],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0013970421,0.00029675357,0.00043373392,0.00050414336,0.00009550865,0.000049423372,0.00030349803,0.00056155043,0.0010526365],"category_scores_gemma":[0.00018918389,0.00027727758,0.00016013061,0.00041256097,0.00027932023,0.00011326808,0.00013633186,0.00073522044,0.000094421186],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00026119265,0.000061053404,0.000094716626,0.000020197826,0.00016559617,0.00015058283,0.00012087084,0.0000039525203,0.98642296,0.0038873476,0.00009852987,0.008712998],"study_design_scores_gemma":[0.0004906524,0.0004007113,0.00006638631,0.00005144579,0.000043044514,0.00021531252,0.0001493485,0.00043459516,0.9854378,0.0020412023,0.0103508625,0.00031861942],"about_ca_topic_score_codex":0.00021400768,"about_ca_topic_score_gemma":0.0000030378662,"teacher_disagreement_score":0.20883216,"about_ca_system_score_codex":0.000139351,"about_ca_system_score_gemma":0.00008360115,"threshold_uncertainty_score":0.99996793},"labels":[],"label_agreement":null},{"id":"W4401905299","doi":"10.1007/978-1-0716-4108-8_24","title":"Identifying a Gene Deficiency in the Antiviral Innate Immune Signaling Pathway","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Biology; Interferon; Intrinsic immunity; Signal transduction; Immune system; Pattern recognition receptor; Immunology; Enhancer; Interferon regulatory factors; Immunity; Innate lymphoid cell; Gene; Cell biology; Transcription factor; Genetics","score_opus":0.0307448738650364,"score_gpt":0.3774792791898959,"score_spread":0.3467344053248595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905299","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5412243,0.06910943,0.38615465,0.00029239885,0.001513454,0.00029147533,0.000009105881,0.000064644766,0.0013405653],"genre_scores_gemma":[0.9658452,0.00012483433,0.033262175,0.00032641075,0.00001393938,0.000060972437,0.00003456228,0.000023630448,0.00030827284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9932789,0.0052110534,0.00051963894,0.00043375412,0.000026473066,0.00053013756],"domain_scores_gemma":[0.99890316,0.00066871877,0.00005699744,0.00034250983,0.000022283884,0.000006312902],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0039050833,0.00021588044,0.00034753987,0.0004971234,0.00007957503,0.00004280541,0.0005102511,0.0003270461,0.0000970103],"category_scores_gemma":[0.00036595872,0.00015287238,0.00016194994,0.00059873646,0.00026401164,0.000049530598,0.00017443771,0.0007616629,0.00012192947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072206654,0.00005141494,0.0001544717,0.000021939804,0.000036030153,0.0001561222,0.0013171809,0.0000045597258,0.96068186,0.011427095,0.00000835364,0.026068784],"study_design_scores_gemma":[0.00037363643,0.00017114061,0.00039423775,0.00008273474,0.00001324322,0.0001740928,0.00048291826,0.00003885597,0.9873404,0.004570244,0.006166629,0.00019189142],"about_ca_topic_score_codex":0.00010982291,"about_ca_topic_score_gemma":0.000010736802,"teacher_disagreement_score":0.42462093,"about_ca_system_score_codex":0.000047926373,"about_ca_system_score_gemma":0.00007668935,"threshold_uncertainty_score":0.6233955},"labels":[],"label_agreement":null},{"id":"W4401905307","doi":"10.1007/978-1-0716-4108-8_20","title":"The Application of Organoids in the Study of Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Response and Inflammation","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Organoid; Biology; Immunity; Intrinsic immunity; Viral infection; Acquired immune system; Immunology; Immune system; Cell biology; Virus","score_opus":0.014175887829756975,"score_gpt":0.37452374566128716,"score_spread":0.36034785783153017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905307","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9168929,0.0045486568,0.07744654,0.00017509656,0.00020038754,0.000455428,0.0000015573564,0.000009488392,0.00026995022],"genre_scores_gemma":[0.9977424,0.00009277652,0.0020272236,0.000022354867,0.0000036206504,0.00006460613,0.00001465638,0.000006425535,0.00002591018],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9931956,0.0060524833,0.00043538984,0.00014456981,0.000019743713,0.00015220724],"domain_scores_gemma":[0.99853635,0.0009468393,0.000093769995,0.00038977922,0.000031531486,0.0000017192907],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004313693,0.00008808586,0.0002067901,0.00017057772,0.0000490441,0.0000049991854,0.0003681107,0.00015914113,0.0000052580544],"category_scores_gemma":[0.00033676732,0.000050847775,0.00004755815,0.0005133863,0.00022785725,0.000021262977,0.000091626986,0.0003375464,0.0000063471425],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009282632,0.00010735092,0.0015710101,0.000011435995,0.0000509585,0.0000019609622,0.001989925,0.000004403009,0.9131324,0.0092186,0.000003988212,0.073815115],"study_design_scores_gemma":[0.0005332376,0.0004581956,0.011667355,0.000016243077,0.00002313054,0.000008991884,0.0023804528,0.00008738666,0.974634,0.0048808926,0.0052335775,0.00007655219],"about_ca_topic_score_codex":0.00030491952,"about_ca_topic_score_gemma":0.000053908767,"teacher_disagreement_score":0.08084953,"about_ca_system_score_codex":0.000014534796,"about_ca_system_score_gemma":0.00003682382,"threshold_uncertainty_score":0.20735121},"labels":[],"label_agreement":null},{"id":"W4401905323","doi":"10.1007/978-1-0716-4108-8_25","title":"Protein Kinase R (PKR) as a Novel dsRNA Sensor in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"National Institute of Allergy and Infectious Diseases","keywords":"Protein kinase R; RNA silencing; Innate immune system; Effector; Biology; Cell biology; RNA; Protein kinase A; Kinase; Virology; RNA interference; Mitogen-activated protein kinase kinase; Immunology; Immune system; Gene; Biochemistry","score_opus":0.0191225366654456,"score_gpt":0.3793492044087476,"score_spread":0.360226667743302,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905323","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7695318,0.0018960611,0.2258718,0.00034554012,0.00019199723,0.0004021512,0.000021565333,0.000030835356,0.0017082796],"genre_scores_gemma":[0.7965337,0.000046310954,0.20194067,0.0005271732,0.000065011816,0.00010686506,0.00012883531,0.00004149444,0.00060994865],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997553,0.0010479577,0.00036532426,0.00057662814,0.00007404691,0.0003830668],"domain_scores_gemma":[0.99933887,0.000037682414,0.00005161007,0.00045359574,0.000037379203,0.0000808429],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010603422,0.00023782693,0.0002535898,0.00027743756,0.000031440188,0.00003377703,0.00023396863,0.00034277447,0.000031166703],"category_scores_gemma":[0.0006244046,0.00022741611,0.00014203954,0.0004253536,0.00016519756,0.000005313089,0.00020348256,0.0002803474,0.000018666775],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001266591,0.00011947878,0.0011603513,0.0000390925,0.000028971372,0.00012004189,0.000036732657,0.000042741107,0.9789148,0.0047459076,0.00001400046,0.014651256],"study_design_scores_gemma":[0.0012227248,0.00024587632,0.003244087,0.00007427966,0.000014667291,0.000033868655,0.00006536071,0.0015160971,0.96870536,0.0058041587,0.018630302,0.00044322936],"about_ca_topic_score_codex":0.00014605114,"about_ca_topic_score_gemma":0.000031634223,"teacher_disagreement_score":0.02700192,"about_ca_system_score_codex":0.00003582117,"about_ca_system_score_gemma":0.00016127287,"threshold_uncertainty_score":0.927376},"labels":[],"label_agreement":null},{"id":"W4401905324","doi":"10.1007/978-1-0716-4108-8_21","title":"Yeast Two-Hybrid Assay for Investigating Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infectious Diseases and Gene Expression in Insects","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Innate immune system; Yeast; Biology; Immunity; Computational biology; Immune system; Virology; Immunology; Genetics","score_opus":0.023666593798567018,"score_gpt":0.40153307099429864,"score_spread":0.37786647719573163,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905324","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2274782,0.0031193218,0.76673895,0.00010040661,0.0008889214,0.00031540546,0.00008090836,0.00004858104,0.0012293126],"genre_scores_gemma":[0.7062606,0.00007322076,0.29195705,0.0007283127,0.00026861727,0.00019432559,0.0002815314,0.000055723252,0.00018060544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974708,0.0011622951,0.00033208262,0.000577661,0.00005641057,0.00040075835],"domain_scores_gemma":[0.9993024,0.000106233376,0.00006543422,0.00039116596,0.000055060656,0.00007969357],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014342054,0.00023755539,0.00024532503,0.00014198279,0.00009333738,0.00005285241,0.00024939483,0.00018750799,0.000016575335],"category_scores_gemma":[0.0008573273,0.00022012916,0.00021827153,0.00020508569,0.0001752262,0.000005309923,0.00023233889,0.00023673824,0.000005904279],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002901314,0.000035329867,0.0007694446,0.000055567583,0.00006504867,0.000011817686,0.000023457134,0.000115943614,0.97042733,0.0022817664,0.00055789767,0.025627378],"study_design_scores_gemma":[0.0004685907,0.00031070385,0.000094268,0.000056621473,0.000023520779,0.00002248175,0.00001997989,0.0023996443,0.94824606,0.019509215,0.028542684,0.00030621467],"about_ca_topic_score_codex":0.000060763687,"about_ca_topic_score_gemma":0.000011550777,"teacher_disagreement_score":0.4787824,"about_ca_system_score_codex":0.00002300451,"about_ca_system_score_gemma":0.00011350574,"threshold_uncertainty_score":0.8976607},"labels":[],"label_agreement":null},{"id":"W4401905327","doi":"10.1007/978-1-0716-4108-8_19","title":"Epidemiological Study in Antiviral Innate Immunity","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Epidemiology; Observational study; Innate immune system; Immunity; Medicine; Immunology; Cohort study; Immune system; Internal medicine","score_opus":0.15480621218973814,"score_gpt":0.5706081859227995,"score_spread":0.4158019737330614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4401905327","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8436726,0.001504381,0.15064427,0.00035343447,0.00020532584,0.0007111118,0.0000015312323,0.00007099238,0.0028363608],"genre_scores_gemma":[0.8819132,0.00005016249,0.11735055,0.00039470269,0.000035788573,0.00013817895,0.0000063804737,0.000020142017,0.000090896625],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.990071,0.0084712645,0.0004982576,0.00046983233,0.000083396815,0.00040622178],"domain_scores_gemma":[0.99863625,0.00083622936,0.000024391615,0.0004145157,0.00003329938,0.0000552944],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.008335688,0.0001700687,0.00055500667,0.0007769543,0.000027582464,0.000015162565,0.00015952889,0.0002581348,0.000084342566],"category_scores_gemma":[0.004024187,0.00012571203,0.00010598086,0.0012343095,0.00022182098,0.000034634908,0.00022114026,0.0012236497,0.000042589185],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009154499,0.0004204232,0.38489327,0.000036747006,0.000056104574,0.0013010403,0.00010895981,0.000012789172,0.53505,0.0027897654,0.000015907037,0.07522348],"study_design_scores_gemma":[0.003721279,0.008316099,0.79976773,0.0002499129,0.00007491165,0.00019682584,0.00055062625,0.0064109117,0.12578021,0.038471643,0.015746431,0.0007133942],"about_ca_topic_score_codex":0.00029942684,"about_ca_topic_score_gemma":0.00004122166,"teacher_disagreement_score":0.4148745,"about_ca_system_score_codex":0.00014743842,"about_ca_system_score_gemma":0.00009978725,"threshold_uncertainty_score":0.5316217},"labels":[{"model":"gpt","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"grok","categories":[],"domain":null,"study_design":"theoretical_or_conceptual","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"high"},{"model":"opus","categories":[],"domain":null,"study_design":"not_applicable","genre":"methods","about_ca_system":false,"about_ca_topic":false,"confidence":"medium"}],"label_agreement":"split"},{"id":"W4402274588","doi":"10.1007/978-1-0716-4100-2_4","title":"Electrochemical Detection of Nucleic Acids Using Three-Dimensional Graphene Screen-Printed Electrodes","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Portage College","funders":"","keywords":"Graphene; Nucleic acid; Electrochemistry; Electrode; Nanotechnology; Materials science; Chemistry; Biochemistry; Physical chemistry","score_opus":0.01474207926371433,"score_gpt":0.3622149243480065,"score_spread":0.34747284508429216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402274588","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.38334808,0.0020341275,0.6143888,0.000021911637,0.000052257124,0.000086053835,0.0000040819996,0.0000383129,0.000026366895],"genre_scores_gemma":[0.53207046,0.000055418528,0.46770278,0.000056370176,0.000042399148,0.0000054678594,0.000038741415,0.000022478996,0.0000058840574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980896,0.00042180633,0.00040001623,0.0006318002,0.0000923817,0.0003643806],"domain_scores_gemma":[0.9993595,0.00004848005,0.00008709215,0.00035603697,0.000099659206,0.000049232687],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007166612,0.0002417105,0.00033292573,0.0003005802,0.00003835721,0.000011540642,0.00018362046,0.0004052683,0.000003046376],"category_scores_gemma":[0.00020211686,0.00021749984,0.00024457648,0.0005913498,0.00024075386,0.0000037236146,0.00013362146,0.00026892516,5.141559e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009982488,0.000037877602,0.00029953348,0.000016552178,0.000121897814,0.000007107217,0.0000023899004,0.00001573932,0.9841381,0.0004069777,0.0000018073384,0.014852225],"study_design_scores_gemma":[0.00014574426,0.0003300426,0.00006682534,0.000037377777,0.000055534667,0.00006759466,0.0000033882636,0.00440425,0.9880239,0.006177932,0.000456603,0.00023082728],"about_ca_topic_score_codex":0.000040967247,"about_ca_topic_score_gemma":0.000040082257,"teacher_disagreement_score":0.14872238,"about_ca_system_score_codex":0.000040486495,"about_ca_system_score_gemma":0.00006439036,"threshold_uncertainty_score":0.8869386},"labels":[],"label_agreement":null},{"id":"W4402748874","doi":"10.1007/978-1-0716-4079-1_6","title":"Simulated Annealing for RNA Design with SIMARD","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trinity Western University; Western University","funders":"","keywords":"Annealing (glass); Materials science; Simulated annealing; Computer science; Psychology; Computational biology; Biology; Algorithm; Metallurgy","score_opus":0.033615620907150326,"score_gpt":0.38789435687882917,"score_spread":0.35427873597167886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402748874","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.013797317,0.0037892233,0.9811507,0.00015937886,0.00022550592,0.0006093335,0.00001096184,0.000039833925,0.000217739],"genre_scores_gemma":[0.079948604,0.000075088865,0.91914105,0.00032201744,0.00009681759,0.0001359704,0.000054064527,0.00006067328,0.00016570436],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99788886,0.00081775,0.00025129452,0.0006093624,0.000052441195,0.00038030787],"domain_scores_gemma":[0.9992764,0.00022993569,0.00004448391,0.00033506483,0.000055793338,0.000058328256],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015996944,0.00022420812,0.0002557594,0.00012665652,0.00004491244,0.00003232309,0.00021924268,0.00033424166,0.000017355054],"category_scores_gemma":[0.00034513534,0.00018209525,0.00011415897,0.0001941673,0.00007726871,0.0000025836644,0.00006163886,0.00011193613,0.0000036877084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021130033,0.000014121913,0.000024854506,0.000037293874,0.00009209981,0.000024245854,0.000020856069,0.0028033704,0.95356554,0.0014738037,0.00003594319,0.041696545],"study_design_scores_gemma":[0.00036579397,0.00075850496,0.000003719717,0.000042472675,0.000030360254,0.000014929518,0.000013995415,0.0048741437,0.9674262,0.008996033,0.017211247,0.00026261297],"about_ca_topic_score_codex":0.000008357129,"about_ca_topic_score_gemma":0.000001997927,"teacher_disagreement_score":0.06615128,"about_ca_system_score_codex":0.00001677034,"about_ca_system_score_gemma":0.00008875588,"threshold_uncertainty_score":0.7425629},"labels":[],"label_agreement":null},{"id":"W4402749342","doi":"10.1007/978-1-0716-4079-1_10","title":"3D-Based RNA Function Prediction Tools in rnaglib","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Function (biology); Computational biology; Computer science; Biology; Evolutionary biology","score_opus":0.02575327913981404,"score_gpt":0.3523653764739058,"score_spread":0.3266120973340918,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402749342","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05452407,0.0035880755,0.939262,0.0001732942,0.0008357666,0.00030969843,0.000024529647,0.00004215091,0.0012404668],"genre_scores_gemma":[0.3277777,0.00019881914,0.6699301,0.0008666646,0.00026275593,0.00035839793,0.00029323174,0.00007265345,0.0002396685],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99749756,0.001144434,0.00034969742,0.0006104816,0.0000724017,0.0003254421],"domain_scores_gemma":[0.99942845,0.00009317596,0.000044106735,0.00036074905,0.000026285164,0.000047218844],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015864066,0.0002015738,0.00022002106,0.00025953847,0.000026195537,0.000035079116,0.00017898112,0.0004581012,0.00005978696],"category_scores_gemma":[0.00037633517,0.00019285017,0.00011532646,0.00031015786,0.00006366966,0.0000056758786,0.00006722926,0.00020205832,0.00001251124],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000087157125,0.00003003879,0.00034708274,0.000027173872,0.000023615348,0.0000226587,0.000010786417,0.00027971517,0.86863136,0.0015140513,0.00003268326,0.12899369],"study_design_scores_gemma":[0.00035848672,0.0004205632,0.00039848126,0.000054827873,0.000017114977,0.0000086288865,0.000012740298,0.001665645,0.959596,0.0061448547,0.031115456,0.00020719861],"about_ca_topic_score_codex":0.000020979613,"about_ca_topic_score_gemma":0.000015176267,"teacher_disagreement_score":0.27325362,"about_ca_system_score_codex":0.000037382928,"about_ca_system_score_gemma":0.00009117439,"threshold_uncertainty_score":0.78642017},"labels":[],"label_agreement":null},{"id":"W4402926981","doi":"10.1007/7651_2024_571","title":"Assessing Autophagy Flux in Glioblastoma Temozolomide Resistant Cells","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; Research Institute in Oncology and Hematology; University of Manitoba","funders":"","keywords":"Temozolomide; Autophagy; Glioblastoma; Flux (metallurgy); Cancer research; Medicine; Chemistry; Apoptosis; Biochemistry","score_opus":0.023910433302076033,"score_gpt":0.4337185282828551,"score_spread":0.4098080949807791,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402926981","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.62644035,0.011991351,0.35718742,0.00041857595,0.0006993693,0.00037034115,0.0000055794544,0.00015240921,0.0027346204],"genre_scores_gemma":[0.429259,0.000106457905,0.5685681,0.001304993,0.00010882051,0.000070929505,0.000015513178,0.00006499526,0.00050117366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973961,0.0010898516,0.00045477055,0.00054007996,0.000096117416,0.00042308206],"domain_scores_gemma":[0.99910635,0.00034752022,0.000044169254,0.00038194936,0.00002376781,0.00009627275],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013895611,0.00021468662,0.00047930278,0.0005305868,0.000024489496,0.000038164988,0.0001414375,0.00028964816,0.00022381941],"category_scores_gemma":[0.00021647612,0.0001854778,0.00015016463,0.0006662661,0.00013535288,0.000055150707,0.00006856968,0.0004419387,0.0000379919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015989103,0.00008616376,0.00018910931,0.00009218733,0.00005635714,0.0030214512,0.0001123753,0.000015351865,0.95138097,0.003433436,0.000048986694,0.041403748],"study_design_scores_gemma":[0.0008226806,0.00031227578,0.0017872714,0.00023906259,0.00004212975,0.000059064154,0.00008087264,0.0019386511,0.97377086,0.014208053,0.0065451926,0.00019388268],"about_ca_topic_score_codex":0.000037502145,"about_ca_topic_score_gemma":0.000008429929,"teacher_disagreement_score":0.21138068,"about_ca_system_score_codex":0.0001512476,"about_ca_system_score_gemma":0.00020884526,"threshold_uncertainty_score":0.7563565},"labels":[],"label_agreement":null},{"id":"W4402966760","doi":"10.1007/978-1-0716-4128-6_16","title":"Characterization of Age-Dependent Changes in Skeletal Muscle Repair and Regeneration Using a Mouse Model of Acute Muscle Injury","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University; University Health Network","funders":"","keywords":"Regeneration (biology); Skeletal muscle; Muscle damage; Medicine; Biology; Cell biology; Anatomy; Internal medicine","score_opus":0.02151488949893932,"score_gpt":0.3500858044482201,"score_spread":0.32857091494928076,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402966760","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.72877556,0.00042188395,0.27049452,0.000034555043,0.00006309522,0.00014240002,0.000041924035,0.0000087165345,0.000017356606],"genre_scores_gemma":[0.89145374,0.0005853254,0.107576445,0.00010149442,0.00002390842,0.000028738154,0.00017817617,0.000021456475,0.000030740666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998599,0.0004968593,0.00029666495,0.0003935549,0.000042272364,0.00017162657],"domain_scores_gemma":[0.9996098,0.000016251433,0.000084940344,0.00023260478,0.00003184169,0.000024550895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055737066,0.00013741503,0.0002471453,0.00019570101,0.000016138367,0.00000425814,0.00008890763,0.00027998383,0.0000036855336],"category_scores_gemma":[0.00006409925,0.00013898958,0.000068860616,0.0001471032,0.00014780664,0.000005821209,0.00012239217,0.000105589475,1.11362105e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004435351,0.000047651465,0.00017432115,0.000069295485,0.000046979785,0.0000034742275,0.000111780384,0.0005412306,0.99034315,0.000591415,8.453386e-7,0.008025474],"study_design_scores_gemma":[0.00022853538,0.00023217138,0.0005391709,0.000022151526,0.000027038139,0.0000017229542,0.00002006282,0.026322167,0.971194,0.0012140399,0.00006740057,0.00013151279],"about_ca_topic_score_codex":0.000046111305,"about_ca_topic_score_gemma":0.00006074424,"teacher_disagreement_score":0.16291808,"about_ca_system_score_codex":0.0000121268495,"about_ca_system_score_gemma":0.00005071292,"threshold_uncertainty_score":0.5667831},"labels":[],"label_agreement":null},{"id":"W4402966782","doi":"10.1007/978-1-0716-4128-6_4","title":"Method to Assess Immunosenescent CD8+ T Cells in Respiratory Viral Infections","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute","keywords":"Respiratory system; Virology; Medicine; Immunology; Microbiology; Biology; Internal medicine","score_opus":0.09496303368755107,"score_gpt":0.5356135322930518,"score_spread":0.44065049860550065,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4402966782","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0879191,0.0018001978,0.9054125,0.00038427228,0.0006364623,0.00087443425,0.000006684285,0.00012032523,0.0028460503],"genre_scores_gemma":[0.027490856,0.000058585192,0.96887,0.0024118647,0.00015594903,0.0005398109,0.000009504757,0.00009040153,0.00037302106],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99311113,0.0047511463,0.000636273,0.0007374297,0.00016863453,0.0005953566],"domain_scores_gemma":[0.9984583,0.00064382434,0.00003449346,0.0005930643,0.00009948295,0.00017078084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.005454933,0.00025574982,0.00053735106,0.0020331177,0.00005042919,0.000051279872,0.00019642526,0.0003711134,0.00015331643],"category_scores_gemma":[0.00077223167,0.00023537084,0.00017718584,0.00215868,0.00011988061,0.00006399157,0.0002365929,0.001073902,0.00014316854],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004393518,0.00017633433,0.0047656675,0.000079036174,0.000049925275,0.00038213684,0.00006605133,0.00026126608,0.9060925,0.0039370265,0.00008650647,0.08405957],"study_design_scores_gemma":[0.0005752363,0.0009866287,0.0034723089,0.0001394622,0.000026992759,0.000044847016,0.000034625773,0.00071184186,0.809657,0.0019693861,0.18212716,0.0002545105],"about_ca_topic_score_codex":0.00024661282,"about_ca_topic_score_gemma":0.000044327968,"teacher_disagreement_score":0.18204065,"about_ca_system_score_codex":0.0005177809,"about_ca_system_score_gemma":0.00035971557,"threshold_uncertainty_score":0.9598144},"labels":[],"label_agreement":null},{"id":"W4403096544","doi":"10.1007/978-1-0716-4220-7_26","title":"Assembling DNA Plasmids with the Multi-Kingdom (MK) Cloning System","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saint Mary's University","funders":"","keywords":"Plasmid; Cloning (programming); Kingdom; Genetics; Biology; DNA; Computational biology; Computer science; Paleontology; Programming language","score_opus":0.022792467370880344,"score_gpt":0.36014147235301286,"score_spread":0.3373490049821325,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403096544","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33112052,0.0024238573,0.6647751,0.0005232369,0.00057141535,0.0002467342,0.00000949889,0.00006846273,0.00026118814],"genre_scores_gemma":[0.57922536,0.00006824287,0.42003977,0.0002275876,0.00017184936,0.000077186196,0.000044473607,0.000054267774,0.00009127666],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99767125,0.0007234496,0.00030981834,0.000734494,0.00007317381,0.00048782834],"domain_scores_gemma":[0.9991877,0.00008002835,0.00007405443,0.0005561035,0.000049869184,0.00005222149],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012558706,0.00028781642,0.00029280406,0.00016071388,0.000091959955,0.00007267033,0.0004684203,0.00060402224,0.000005597556],"category_scores_gemma":[0.000110267334,0.0001878962,0.00011583807,0.0003759485,0.00026734624,0.0000023419623,0.00029619382,0.00038528533,0.000006799681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045069562,0.000018703638,0.00020431359,0.000044121618,0.00010468719,0.00005338041,0.000025764984,0.000099465666,0.9829576,0.005757549,0.00003002652,0.01065929],"study_design_scores_gemma":[0.00040266896,0.000385821,0.00008716654,0.00007173835,0.00003948542,0.00015433991,0.000115209165,0.0020226564,0.92131114,0.0001135892,0.0749952,0.00030099606],"about_ca_topic_score_codex":0.00003461412,"about_ca_topic_score_gemma":0.000051644412,"teacher_disagreement_score":0.24810484,"about_ca_system_score_codex":0.000036937337,"about_ca_system_score_gemma":0.00009867669,"threshold_uncertainty_score":0.7662185},"labels":[],"label_agreement":null},{"id":"W4403532963","doi":"10.1007/978-1-0716-3898-9_12","title":"Correction to: Experimental Intraperitoneal Infection of Piglets","year":2024,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"Amoebic Infections and Treatments","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Université de Montréal","funders":"","keywords":"Medicine","score_opus":0.019175106214098566,"score_gpt":0.43951255182813154,"score_spread":0.42033744561403297,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403532963","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.018529184,0.010041763,0.5893542,0.00033645114,0.2564487,0.0022187096,0.000047526428,0.0002505205,0.12277297],"genre_scores_gemma":[0.042888053,0.0010234688,0.8195726,0.0011460251,0.0028877805,0.0012332901,0.001344205,0.00037045218,0.12953408],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9981941,0.00048049094,0.00044454602,0.0005190982,0.000099012046,0.00026273404],"domain_scores_gemma":[0.99933153,0.00007477837,0.000106480664,0.00033449134,0.00007209174,0.00008064322],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00039417375,0.00029660438,0.0006908282,0.00074989104,0.000029459528,0.000007895648,0.00005745752,0.0006629118,0.00017018228],"category_scores_gemma":[0.00030160634,0.00026416976,0.00024693893,0.0005339881,0.00010583805,0.000013418893,0.00010414145,0.0008881985,0.000041119303],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029734347,0.001353949,0.004540247,0.00046863922,0.0010817958,0.00046148794,0.0005114325,0.00002789826,0.6839909,0.0008124949,0.22164753,0.084806286],"study_design_scores_gemma":[0.0015161989,0.0060629114,0.00299844,0.0014553184,0.0006808682,0.0008655983,0.00008608294,0.00084588275,0.41076452,0.0010852234,0.57291883,0.0007201172],"about_ca_topic_score_codex":0.0011339979,"about_ca_topic_score_gemma":0.000052379088,"teacher_disagreement_score":0.35127133,"about_ca_system_score_codex":0.0003483943,"about_ca_system_score_gemma":0.00019277766,"threshold_uncertainty_score":0.99998105},"labels":[],"label_agreement":null},{"id":"W4403650353","doi":"10.1007/978-1-0716-4152-1_8","title":"Comparative Proteomics of Bacteria Under Stress Conditions","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"","keywords":"Proteomics; Bacteria; Computational biology; Biology; Genetics","score_opus":0.03020527936879335,"score_gpt":0.42406990010629825,"score_spread":0.3938646207375049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4403650353","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4215651,0.000060697217,0.5756016,0.00013333604,0.00026225176,0.00016027331,0.000063899046,0.000014620377,0.0021382272],"genre_scores_gemma":[0.43138146,0.000009282246,0.56827,0.000093581824,0.000009415706,0.00003196835,0.00003335026,0.0000074347836,0.00016343583],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991368,0.00034298978,0.00017656195,0.00019799314,0.000019870056,0.00012576277],"domain_scores_gemma":[0.9997284,0.00008563535,0.000033216533,0.00012519049,0.0000047273497,0.000022830176],"candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00018110007,0.00007909923,0.00015638696,0.000050574672,0.000019710691,0.000011418751,0.000103364015,0.000074334,0.0017811179],"category_scores_gemma":[0.000014764562,0.000070419694,0.000052263313,0.00017017522,0.00021098142,0.000043175118,0.00009733053,0.00013263611,0.00005058165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000041370513,0.0000338346,0.00014030977,0.0000066172915,0.000017905963,0.000004270113,0.00016120855,0.00019056842,0.9962147,0.002431675,0.00004180937,0.0007529582],"study_design_scores_gemma":[0.00007687149,0.00005707283,0.008324131,0.000027269012,0.00001178718,0.000012274353,0.000082146784,0.00039980604,0.98175,0.0055233086,0.0036405227,0.00009482544],"about_ca_topic_score_codex":0.00017687796,"about_ca_topic_score_gemma":0.00007576061,"teacher_disagreement_score":0.014464721,"about_ca_system_score_codex":0.000055140008,"about_ca_system_score_gemma":0.000009728991,"threshold_uncertainty_score":0.9991314},"labels":[],"label_agreement":null},{"id":"W4404247283","doi":"10.1007/978-1-0716-4168-2_23","title":"Identifying Drug Sensitivities in Fission Yeast by Assessing Growth Kinetics","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Toronto Metropolitan University","funders":"","keywords":"Kinetics; Fission; Yeast; Drug; Chemistry; Pharmacology; Biology; Biochemistry; Nuclear physics; Physics; Neutron","score_opus":0.025801478077550836,"score_gpt":0.42323654117611725,"score_spread":0.3974350630985664,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404247283","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5026061,0.010197799,0.48469752,0.00039596247,0.00045950568,0.0001883114,0.000027242722,0.00002375694,0.0014037957],"genre_scores_gemma":[0.789435,0.00048700534,0.20885102,0.00020218793,0.00011202943,0.000033036064,0.00016602881,0.000053366606,0.00066032115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972471,0.0012199479,0.00031688475,0.00061741157,0.00013166155,0.00046699774],"domain_scores_gemma":[0.999493,0.00008393496,0.00003289677,0.00026025975,0.000054756718,0.00007516667],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012640025,0.00021220554,0.0002341825,0.00026936017,0.000033765915,0.00009118116,0.00022136698,0.0002928116,0.000017584693],"category_scores_gemma":[0.00031487967,0.00020199027,0.0000926971,0.00037452043,0.00015356962,0.0000057897287,0.0003133773,0.0003776255,0.000007447502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001620799,0.00004483395,0.0015076682,0.00007456784,0.000019140562,0.00008045123,0.00008444878,0.000026731681,0.9858525,0.00031596483,0.00033070295,0.011646826],"study_design_scores_gemma":[0.00022125136,0.00008549333,0.00044300343,0.00009425909,0.0000064502146,0.000028979532,0.00014761594,0.0008632769,0.98860276,0.0025920519,0.0066718026,0.00024308317],"about_ca_topic_score_codex":0.00008198646,"about_ca_topic_score_gemma":0.000033856373,"teacher_disagreement_score":0.28682888,"about_ca_system_score_codex":0.00004131185,"about_ca_system_score_gemma":0.000075370706,"threshold_uncertainty_score":0.82369244},"labels":[],"label_agreement":null},{"id":"W4404247335","doi":"10.1007/978-1-0716-4168-2_14","title":"Investigating Fission Yeast Mutagenesis Using Canavanine Sensitivity Assays","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Canavanine; Yeast; Fission; Mutagenesis; Sensitivity (control systems); Genetics; Biology; Chemistry; Mutation; Physics; Gene; Engineering; Amino acid; Arginine; Nuclear physics","score_opus":0.04550900611807408,"score_gpt":0.42931336290070904,"score_spread":0.38380435678263497,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404247335","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41316292,0.002423675,0.5833211,0.00013662886,0.0002837109,0.00013783349,0.00002563401,0.000020423735,0.0004880874],"genre_scores_gemma":[0.44321555,0.00007905481,0.5559025,0.00022715179,0.00019412005,0.000016563741,0.00008710663,0.000050069248,0.00022790564],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99693686,0.0015768958,0.00026999222,0.0006468677,0.00011424267,0.000455124],"domain_scores_gemma":[0.9993407,0.00007674858,0.00003727201,0.00034698,0.00006463485,0.00013364044],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017868065,0.00021595666,0.0002294515,0.00018654081,0.00006606106,0.000037172984,0.00016104586,0.00031386796,0.000026702111],"category_scores_gemma":[0.00068415236,0.00019970172,0.00011132619,0.00038273848,0.00017087368,0.000002848494,0.0003331061,0.0002695866,0.000007606934],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000095238765,0.000017748094,0.0018560294,0.000045490935,0.000039531416,0.00008347191,0.000029094284,0.0010788253,0.9757477,0.0002653125,0.000048305985,0.020778967],"study_design_scores_gemma":[0.00014693415,0.000117056625,0.00029604664,0.000052022653,0.000014856647,0.00008736368,0.000028943137,0.028713195,0.9637437,0.0008420557,0.005713747,0.0002440722],"about_ca_topic_score_codex":0.00033896626,"about_ca_topic_score_gemma":0.00010328083,"teacher_disagreement_score":0.030052638,"about_ca_system_score_codex":0.00004693545,"about_ca_system_score_gemma":0.000207359,"threshold_uncertainty_score":0.81436},"labels":[],"label_agreement":null},{"id":"W4404247430","doi":"10.1007/978-1-0716-4168-2_15","title":"A Rapidly Inducible DNA Double-Strand Break to Monitor Telomere Formation, DNA Repair, and Checkpoint Activation","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Nexen (Canada)","funders":"National Heart, Lung, and Blood Institute","keywords":"Telomere; G2-M DNA damage checkpoint; DNA; Cell biology; Chemistry; Biology; Genetics; Cell cycle checkpoint; Cell cycle; Gene","score_opus":0.019752423641727516,"score_gpt":0.37995676050566296,"score_spread":0.36020433686393544,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404247430","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4397023,0.0008824208,0.5579707,0.0005628176,0.00010590122,0.0003274019,0.000010673345,0.00010826104,0.00032955248],"genre_scores_gemma":[0.52387184,0.00017681197,0.4752314,0.00035518734,0.0001008032,0.000054275355,0.00008326229,0.000026903783,0.000099499026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981986,0.0003471728,0.00039629985,0.00067314465,0.000077293866,0.00030743718],"domain_scores_gemma":[0.9993224,0.00004156296,0.00006748342,0.00039505577,0.000082158265,0.00009134487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010045578,0.00024314533,0.00027966278,0.00030138894,0.00006180646,0.000043169304,0.00013093074,0.00036830673,0.0000026243235],"category_scores_gemma":[0.00019662398,0.00021188414,0.00013954865,0.0004574901,0.000107703454,0.000011937257,0.00014167989,0.00018894719,0.0000019634342],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000107356995,0.0000251249,0.00008024628,0.0000428345,0.00006667482,0.000007859376,0.0000621061,0.000006801157,0.9660734,0.0003756123,0.00012630172,0.033025686],"study_design_scores_gemma":[0.0003209132,0.00027460806,0.00010553574,0.000061019593,0.000030103298,0.00004152976,0.00006681801,0.0001898243,0.9826853,0.0015764934,0.0143822245,0.00026562947],"about_ca_topic_score_codex":0.000030575633,"about_ca_topic_score_gemma":0.000018335397,"teacher_disagreement_score":0.08416957,"about_ca_system_score_codex":0.000040897583,"about_ca_system_score_gemma":0.000037077087,"threshold_uncertainty_score":0.8640384},"labels":[],"label_agreement":null},{"id":"W4404247773","doi":"10.1007/978-1-0716-4168-2_17","title":"Assessing Drug Sensitivity in Fission Yeast Using Half-Maximal Inhibitory Concentration (IC50) Assays","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Inhibitory postsynaptic potential; Sensitivity (control systems); IC50; Yeast; Drug; Chemistry; Pharmacology; Fission; Biology; Biochemistry; In vitro; Endocrinology; Physics; Engineering; Nuclear physics","score_opus":0.03989840956231445,"score_gpt":0.42960219821054396,"score_spread":0.3897037886482295,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404247773","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5835807,0.002102658,0.41308102,0.00013131394,0.000375266,0.00016443495,0.0000067810047,0.0000134910615,0.00054437923],"genre_scores_gemma":[0.7805575,0.000067074834,0.21894129,0.00009158213,0.00016321393,0.000013183545,0.000079278616,0.000029829307,0.000057043922],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99640423,0.0019989377,0.00033837173,0.00066453277,0.00012925256,0.00046465584],"domain_scores_gemma":[0.99945635,0.00008228252,0.000045977224,0.0002711792,0.000060580656,0.00008360564],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023770349,0.00021219636,0.00024293999,0.00018098172,0.000052106323,0.00008496523,0.00012817974,0.00033583413,0.0000144223695],"category_scores_gemma":[0.00031719528,0.0002053066,0.00009942867,0.000349967,0.00016314306,0.000011562792,0.00023507362,0.00040071446,0.0000050017084],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003322264,0.000047643432,0.0039601685,0.000044188044,0.000017040971,0.00014248358,0.000056905217,0.00054934446,0.9753115,0.00027206886,0.000023258508,0.01954217],"study_design_scores_gemma":[0.00030112587,0.00007113015,0.0010636278,0.00009935985,0.0000082591405,0.00005130585,0.000079040285,0.026290469,0.968243,0.0007557719,0.002789317,0.00024757578],"about_ca_topic_score_codex":0.00012663938,"about_ca_topic_score_gemma":0.00007606815,"teacher_disagreement_score":0.19697686,"about_ca_system_score_codex":0.000086122025,"about_ca_system_score_gemma":0.0002439388,"threshold_uncertainty_score":0.837216},"labels":[],"label_agreement":null},{"id":"W4404248124","doi":"10.1007/978-1-0716-4168-2","title":"Schizosaccharomyces pombe","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Plant and fungal interactions","field":"Agricultural and Biological Sciences","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Lerner Research Institute, Cleveland Clinic; Université de Bordeaux; Cleveland Clinic; Cleveland Clinic Foundation; Friedreich's Ataxia Research Alliance; Slovenská Akadémia Vied; Yale University; University of Edinburgh; Institute of Genetics; Directorate for Biological Sciences; Centre National de la Recherche Scientifique; European Molecular Biology Laboratory; Cancer Research Institute","keywords":"Schizosaccharomyces pombe; Biology; Genetics; Yeast; Saccharomyces cerevisiae","score_opus":0.03642337859095087,"score_gpt":0.3678488243425517,"score_spread":0.3314254457516008,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404248124","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0018484918,0.014581648,0.0069806315,0.0020662285,0.0040843496,0.0006612195,0.000885204,0.0003462096,0.96854603],"genre_scores_gemma":[0.00030580204,0.00067195256,0.1537579,0.0012870231,0.0012152406,0.00011655381,0.0020259607,0.000011447631,0.8406081],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.998303,0.00044266085,0.00032120655,0.0005489325,0.000069143076,0.00031505656],"domain_scores_gemma":[0.99913806,0.0005980315,0.000090126436,0.0000845173,0.00002773322,0.00006150935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00052307063,0.00028148835,0.00042143458,0.00007131213,0.0000445265,0.00004613753,0.00037500513,0.0006582707,0.0007420182],"category_scores_gemma":[0.000108489105,0.000109892346,0.00023646124,0.00018046095,0.000083303545,0.000023603052,0.00018373596,0.0007813241,0.0003455828],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018710385,0.000038880924,0.00002718332,0.000017501217,0.00006488438,0.00012635511,0.000014123813,3.507424e-7,0.87937266,0.027769107,0.008045806,0.08450447],"study_design_scores_gemma":[0.000048806007,0.000121494486,0.00004553435,0.00010210994,0.000034686997,0.00004335443,0.00000870769,0.000022652643,0.0049398225,0.12182287,0.8725038,0.0003061376],"about_ca_topic_score_codex":0.000049549955,"about_ca_topic_score_gemma":0.00020561785,"teacher_disagreement_score":0.8744328,"about_ca_system_score_codex":0.00006508788,"about_ca_system_score_gemma":0.000030694322,"threshold_uncertainty_score":0.8124579},"labels":[],"label_agreement":null},{"id":"W4404388790","doi":"10.1007/978-1-0716-4200-9","title":"Psychoneuroimmunology","year":2024,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Illinois at Urbana-Champaign; Universidade do Extremo Sul Catarinense; University of Tasmania; Technische Universität München; Health Science Center, University of North Texas; Universidad de Buenos Aires; University of Lethbridge; University of Texas Health Science Center at Houston; University of North Texas; University of Washington; McGovern Medical School; Washington University in St. Louis; Queensland University of Technology; National Institute on Minority Health and Health Disparities; Roswell Park Cancer Institute","keywords":"Psychoneuroimmunology; Psychology; Medicine","score_opus":0.044200040166825716,"score_gpt":0.4096157609277764,"score_spread":0.3654157207609507,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404388790","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00006646384,0.0074983505,0.19624732,0.0007761757,0.004078101,0.0005100745,0.000041568295,0.0002653035,0.7905166],"genre_scores_gemma":[0.00004803749,0.0010570335,0.24967766,0.007980507,0.00017972129,0.00012409376,0.000044120585,0.00024938435,0.74063945],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9958102,0.0018215248,0.00045882893,0.0012795811,0.00009395619,0.0005359061],"domain_scores_gemma":[0.99836946,0.00073111255,0.00011979362,0.00071485457,0.000013384018,0.000051374172],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005229307,0.0004304798,0.0006147392,0.0006545602,0.000032050604,0.000027610833,0.00078230276,0.00096483197,0.00029099148],"category_scores_gemma":[0.001058445,0.00040618377,0.00025382254,0.00031971958,0.0005656431,0.00001575459,0.0003430504,0.0013502958,0.000634129],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017157929,0.000027369955,8.3513964e-7,0.000046239616,0.000014530853,0.0003584681,0.00003996746,0.0000016532458,0.7917889,0.16884796,0.00402286,0.03483405],"study_design_scores_gemma":[0.00019267183,0.00010420548,0.0000022791742,0.000039317958,0.000009450188,0.000063875916,0.0000023211358,0.000016519976,0.08396588,0.3979804,0.5173274,0.00029569032],"about_ca_topic_score_codex":0.0000034516218,"about_ca_topic_score_gemma":0.0000030431497,"teacher_disagreement_score":0.70782304,"about_ca_system_score_codex":0.000090853886,"about_ca_system_score_gemma":0.0001962602,"threshold_uncertainty_score":0.999839},"labels":[],"label_agreement":null},{"id":"W4404388834","doi":"10.1007/978-1-0716-4200-9_12","title":"The MRL Model: A Valuable Tool in Studies of Autoimmunity-Brain Interactions","year":2024,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Tryptophan and brain disorders","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Autoimmunity; Cognitive science; Computer science; Neuroscience; Psychology; Medicine; Immunology; Immune system","score_opus":0.20772435678495638,"score_gpt":0.5468747537047711,"score_spread":0.33915039691981475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404388834","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000022184722,0.95925456,0.038464375,0.00034368678,0.0006206261,0.0006372634,0.000020935693,0.00003571645,0.00060064247],"genre_scores_gemma":[0.0000036380218,0.939599,0.059047606,0.00035047365,0.000010931685,0.00035929435,0.000004606504,0.000043083666,0.0005813682],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9907493,0.00730355,0.0008883319,0.0005784003,0.0000939966,0.000386428],"domain_scores_gemma":[0.9939888,0.005088351,0.00023646673,0.00064375217,0.00002646904,0.000016172784],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0027759953,0.00034865184,0.0013059743,0.0005349849,0.000080749414,0.0000246137,0.0007717117,0.00025230923,0.000007047447],"category_scores_gemma":[0.008471688,0.00022014441,0.00040171147,0.0011955062,0.0005505395,0.000029266408,0.0005730695,0.00095626316,0.000009515677],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008860048,0.00008808446,3.3248932e-7,0.0029245894,0.0000986079,0.000044641496,0.00042699784,0.00013485439,0.018225607,0.039905343,0.00039556282,0.9377465],"study_design_scores_gemma":[0.00015652692,0.00007258755,1.2035783e-7,0.0024976153,0.000101485464,0.000034314122,0.00015544024,0.0016650921,0.0018866,0.08564757,0.9074772,0.00030545727],"about_ca_topic_score_codex":0.000019654044,"about_ca_topic_score_gemma":0.0000509949,"teacher_disagreement_score":0.93744105,"about_ca_system_score_codex":0.00012669049,"about_ca_system_score_gemma":0.000216362,"threshold_uncertainty_score":0.9998804},"labels":[],"label_agreement":null},{"id":"W4404388835","doi":"10.1007/978-1-0716-4200-9_14","title":"A Computational Protocol for the Knowledge-Based Assessment and Capture of Pathologies","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Protocol (science); Computer science; Medicine; Pathology","score_opus":0.029849059436040964,"score_gpt":0.44885965252595117,"score_spread":0.4190105930899102,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404388835","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0022472043,0.0018039132,0.9845214,0.0002410251,0.000057574758,0.011025278,0.000011125155,0.000009130032,0.00008333876],"genre_scores_gemma":[0.060883593,0.0000069934986,0.8935197,0.00012529995,0.000049866954,0.04530718,0.000046119363,0.000021213842,0.000040033883],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99864495,0.0005868591,0.0002325803,0.00033885182,0.00003958121,0.00015720788],"domain_scores_gemma":[0.9993403,0.00028322835,0.000054448756,0.00022893319,0.00007226196,0.000020820224],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011221578,0.00013038852,0.00018841453,0.00008378167,0.000034492336,0.000012912034,0.00014922483,0.00017178926,0.0000051262614],"category_scores_gemma":[0.00010249784,0.00008930362,0.00012290034,0.0001632484,0.00021997355,9.1145205e-7,0.000094961135,0.00009035206,1.6486624e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077989,0.00007849488,0.0029122236,0.00026475135,0.00023473767,0.0000047028766,0.00005603097,0.025564387,0.91686434,0.007072749,0.00024157464,0.046628024],"study_design_scores_gemma":[0.0030860407,0.0014173789,0.007814686,0.00015471871,0.00029120018,0.000044500124,0.0002131315,0.42535326,0.3963145,0.039436433,0.12509091,0.0007832471],"about_ca_topic_score_codex":0.0000035934527,"about_ca_topic_score_gemma":0.000007584976,"teacher_disagreement_score":0.52054983,"about_ca_system_score_codex":0.000013841564,"about_ca_system_score_gemma":0.00016438666,"threshold_uncertainty_score":0.3641696},"labels":[],"label_agreement":null},{"id":"W4404388840","doi":"10.1007/978-1-0716-4200-9_16","title":"Perinatal Psychoneuroimmunology of Prenatal Stress and Its Effects on Fetal and Postnatal Brain Development","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Stress Responses and Cortisol","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Université de Montréal","funders":"","keywords":"Psychoneuroimmunology; Prenatal stress; Fetus; Psychology; Medicine; Pregnancy; Gestation; Biology; Immunology; Immune system","score_opus":0.022345079133793695,"score_gpt":0.3833068132687835,"score_spread":0.36096173413498983,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404388840","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9766552,0.005009335,0.017414685,0.00017743274,0.0003647363,0.00022845635,0.000027215123,0.00003018462,0.00009277305],"genre_scores_gemma":[0.97274834,0.00029139573,0.026561012,0.00025564677,0.00001245924,0.00004430223,0.0000036216395,0.000021505315,0.00006172834],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978199,0.0010464623,0.00022380045,0.00057470135,0.00008202819,0.00025309462],"domain_scores_gemma":[0.99856067,0.0011918576,0.000039774524,0.00015393103,0.000010800301,0.00004297487],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014800875,0.00017137932,0.00023937819,0.00024781245,0.0000365437,0.000019356612,0.00015673556,0.00014636712,0.000009458073],"category_scores_gemma":[0.0009937022,0.00014948501,0.000034666555,0.00018543052,0.00017628861,0.00003159137,0.00022658739,0.00026248957,0.0000025819472],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015105972,0.000022806129,0.00017541186,0.00016932767,0.000010904278,0.00051230827,0.00014027815,0.000001443468,0.81252116,0.0063265064,4.931771e-7,0.1799683],"study_design_scores_gemma":[0.00037360453,0.00058858877,0.005438943,0.00013918795,0.0000044621165,0.00031106974,0.000011145261,0.00046569406,0.9915888,0.00034141363,0.0005932102,0.0001439296],"about_ca_topic_score_codex":0.000005190298,"about_ca_topic_score_gemma":0.0000015874058,"teacher_disagreement_score":0.17982437,"about_ca_system_score_codex":0.000013189048,"about_ca_system_score_gemma":0.000037448037,"threshold_uncertainty_score":0.6095822},"labels":[],"label_agreement":null},{"id":"W4404393788","doi":"10.1007/978-1-0716-4264-1_9","title":"Creating Physiological Cell Environments In Vitro: Adjusting Cell Culture Media Composition and Oxygen Levels to Investigate Mitochondrial Function and Cancer Metabolism","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Brock University","funders":"","keywords":"Function (biology); In vitro; Cancer cell lines; Cell metabolism; Metabolism; Biology; Mitochondrion; Cell biology; Cancer; Cancer cell; Biochemistry; Genetics","score_opus":0.024221193086571873,"score_gpt":0.32366267970706103,"score_spread":0.29944148662048914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404393788","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5685962,0.00919036,0.42041662,0.00012314574,0.0010804485,0.00036407824,0.000051793362,0.000017756754,0.00015962854],"genre_scores_gemma":[0.34855643,0.00084529683,0.6473934,0.0017293784,0.0006953,0.00023034934,0.0003006255,0.000049640537,0.00019960904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99742067,0.0010614992,0.00032973025,0.0008000816,0.00006213096,0.00032586022],"domain_scores_gemma":[0.99955326,0.00007372026,0.000062255574,0.00017198964,0.00001520629,0.00012355868],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004036606,0.00025585663,0.00033156315,0.00015306896,0.000057382247,0.000027670194,0.000098591976,0.0004660253,0.000021666643],"category_scores_gemma":[0.00016459782,0.00022733521,0.00005837718,0.00018374254,0.00013196003,0.000007168642,0.0002002343,0.00030792752,0.000003568549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017583049,0.00002948776,0.00019826909,0.000035686284,0.000016253089,0.000012694146,0.0002709918,0.00019130147,0.99381375,0.00009861579,0.00004312691,0.0051140175],"study_design_scores_gemma":[0.0008657106,0.00018551781,0.0020785856,0.000029227314,0.00004798195,0.000014027781,0.000089114554,0.0004700483,0.98763984,0.001002845,0.0072856834,0.00029144148],"about_ca_topic_score_codex":0.000060061844,"about_ca_topic_score_gemma":0.000012469571,"teacher_disagreement_score":0.22697677,"about_ca_system_score_codex":0.0000248181,"about_ca_system_score_gemma":0.000030401188,"threshold_uncertainty_score":0.92704606},"labels":[],"label_agreement":null},{"id":"W4404425357","doi":"10.1007/978-1-0716-4200-9_13","title":"A Computational Pipeline for Identifying Gene Regulatory Networks: A Case Study of Response to Exercise","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan","funders":"","keywords":"Pipeline (software); Computational biology; Computer science; Gene regulatory network; Gene; Biology; Genetics; Gene expression","score_opus":0.02826814207723966,"score_gpt":0.39853393730191516,"score_spread":0.3702657952246755,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404425357","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.31871802,0.0019633214,0.67838883,0.000033525386,0.00025095837,0.00061232666,0.00001538951,0.0000094602665,0.000008163504],"genre_scores_gemma":[0.5240075,0.000011706281,0.47553912,0.00012953185,0.00006553705,0.00012554078,0.000046728986,0.00002471758,0.000049631337],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99813235,0.0005289881,0.00056433084,0.00043276753,0.000060638446,0.00028094],"domain_scores_gemma":[0.99920577,0.0001748827,0.000079276964,0.0003720834,0.00009203556,0.0000759523],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026072518,0.00018329242,0.00030499313,0.00022053909,0.00004585867,0.00002298532,0.00018680832,0.00021756638,0.0000036580755],"category_scores_gemma":[0.00015318798,0.00017991946,0.000121507706,0.0002768538,0.000058632773,0.0000027394492,0.00020451173,0.00011931966,8.66508e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0011809943,0.00020239061,0.00008923567,0.00008309931,0.00014829046,0.0003406669,0.00097103184,0.09780784,0.7902728,0.00039814552,0.0003982499,0.10810726],"study_design_scores_gemma":[0.0055693113,0.00424611,0.00029043536,0.00033402088,0.0003374093,0.0019033215,0.00369454,0.7933018,0.16631612,0.016169159,0.00636618,0.0014715843],"about_ca_topic_score_codex":0.000026681015,"about_ca_topic_score_gemma":0.000022840424,"teacher_disagreement_score":0.69549394,"about_ca_system_score_codex":0.000021797303,"about_ca_system_score_gemma":0.00007236866,"threshold_uncertainty_score":0.73369026},"labels":[],"label_agreement":null},{"id":"W4404425391","doi":"10.1007/978-1-0716-4200-9_15","title":"Microglial and Macrophage Plasticity and Regional Cerebral Blood Flow in the Prenatal Brain and Gut Under Vagus Nerve Stimulation","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Vagus Nerve Stimulation Research","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Vagus nerve stimulation; Neuroscience; Cerebral blood flow; Vagus nerve; Stimulation; Medicine; Biology; Internal medicine","score_opus":0.05142677258771256,"score_gpt":0.41725630513736184,"score_spread":0.3658295325496493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404425391","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.776217,0.0009993309,0.22085555,0.0014360709,0.00007903611,0.0003186986,0.000027182368,0.000020116819,0.000047025635],"genre_scores_gemma":[0.91293836,0.0000233433,0.086368285,0.0005336496,0.000046227568,0.0000246696,0.0000073562906,0.00001596082,0.00004216982],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9960391,0.002702915,0.00023275412,0.0006025228,0.00013046843,0.00029223834],"domain_scores_gemma":[0.9970086,0.0027576343,0.000029087247,0.00013656769,0.000014856762,0.000053239568],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011828587,0.00015339389,0.0001762044,0.00025343415,0.000077642384,0.0000998694,0.00014830893,0.00016332255,0.000016761596],"category_scores_gemma":[0.0013044765,0.00011773311,0.000028158745,0.00034496957,0.00042748082,0.00006861746,0.00020620174,0.00041213937,0.0000011703166],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000048748676,0.000029129304,0.0027099708,0.000050959967,0.000007703035,0.00024221225,0.00028499882,0.001233342,0.9753681,0.0100412965,0.000008231869,0.009975346],"study_design_scores_gemma":[0.0029639946,0.0006684975,0.04784225,0.00009097229,0.000038479986,0.00095854455,0.00007351023,0.5702876,0.3164327,0.05989398,0.00029164756,0.00045784988],"about_ca_topic_score_codex":0.00006263127,"about_ca_topic_score_gemma":0.00003987029,"teacher_disagreement_score":0.65893537,"about_ca_system_score_codex":0.000023404424,"about_ca_system_score_gemma":0.000042612282,"threshold_uncertainty_score":0.48010167},"labels":[],"label_agreement":null},{"id":"W4404612153","doi":"10.1007/978-1-0716-4196-5_14","title":"Computational Prediction of Linear Interacting Peptides","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Machine Learning in Bioinformatics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Michael Smith Health Research BC; Canada's Michael Smith Genome Sciences Centre","funders":"","keywords":"Computer science; Computational biology; Biological system; Biology","score_opus":0.016682605953480763,"score_gpt":0.40583495289388516,"score_spread":0.3891523469404044,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404612153","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07209374,0.00062125456,0.9252594,0.00007793197,0.00035473562,0.00009520413,0.000022954187,0.000022588645,0.0014521962],"genre_scores_gemma":[0.18453181,0.000023103361,0.8149509,0.00009772691,0.00007040778,0.000010090785,0.00023209228,0.000016613243,0.00006728031],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987812,0.00040789857,0.00037267222,0.00022918945,0.00005718072,0.00015184752],"domain_scores_gemma":[0.99953306,0.00014260152,0.00007467705,0.00017314665,0.00005121963,0.000025301582],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091841526,0.00011494918,0.00015224391,0.0001499651,0.000021075168,0.000009769511,0.00013744946,0.0001671474,0.000018842635],"category_scores_gemma":[0.00074891106,0.00010841598,0.000084805106,0.0001603324,0.00008944207,0.000003455364,0.00012051105,0.0002088272,0.0000044163753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002115657,0.000022119784,0.0042443406,0.00009904862,0.00006291679,0.0000043259984,0.00015637426,0.014653926,0.9599065,0.002620342,0.00008584318,0.01812306],"study_design_scores_gemma":[0.00052413164,0.0007347193,0.0012652634,0.00018971616,0.00003692309,0.00012439548,0.00015515645,0.46775812,0.47450888,0.0067027723,0.04766808,0.00033185384],"about_ca_topic_score_codex":0.000011507734,"about_ca_topic_score_gemma":0.0000015682654,"teacher_disagreement_score":0.48539767,"about_ca_system_score_codex":0.000013673413,"about_ca_system_score_gemma":0.000049967908,"threshold_uncertainty_score":0.44210756},"labels":[],"label_agreement":null},{"id":"W4404672552","doi":"10.1007/7651_2024_582","title":"Robust Expansion of Hematopoietic Stem Cells Ex Vivo Using Small Molecule Cocktails","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Canadian Blood Services","funders":"","keywords":"Ex vivo; Stem cell; Haematopoiesis; Small molecule; Cell biology; Chemistry; Biology; In vivo; Biochemistry; Genetics","score_opus":0.05089811380790989,"score_gpt":0.3534934851523209,"score_spread":0.302595371344411,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404672552","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4513281,0.0039521875,0.5439037,0.000018200191,0.00038611202,0.00014431533,0.00001233437,0.000012930022,0.00024213061],"genre_scores_gemma":[0.5084252,0.00050212967,0.4900422,0.0003337042,0.00012382203,0.00003502061,0.000040443167,0.00008874634,0.0004087634],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99756193,0.0007450861,0.0005158436,0.00069469615,0.00008169502,0.00040074275],"domain_scores_gemma":[0.99913913,0.000062140374,0.00009791943,0.00054065714,0.000087601795,0.00007253323],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0007820778,0.00027913757,0.00039689624,0.0002164779,0.000027485574,0.000022816786,0.00035167465,0.00041902578,0.00004208272],"category_scores_gemma":[0.000044168035,0.0002637959,0.00022487073,0.00028586033,0.00016338105,0.0000039745496,0.00025724326,0.00019722678,0.0000083666555],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041099134,0.000037608424,0.000096237054,0.00010758509,0.00007350965,0.00005251561,0.00008635925,0.0010417261,0.994196,0.00037409316,0.000063485495,0.0038298075],"study_design_scores_gemma":[0.0002146241,0.00033175718,0.000004896319,0.00011567599,0.000037219615,0.000036882902,0.00014237053,0.0031892855,0.9938405,0.00046126483,0.0013516105,0.00027387118],"about_ca_topic_score_codex":0.000054268505,"about_ca_topic_score_gemma":0.000009764921,"teacher_disagreement_score":0.05709708,"about_ca_system_score_codex":0.00002827398,"about_ca_system_score_gemma":0.000136588,"threshold_uncertainty_score":0.9999814},"labels":[],"label_agreement":null},{"id":"W4404691142","doi":"10.1007/978-1-0716-4256-6_8","title":"Monoclonal Antibody Production Against Filoviruses from Immunized Mice","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Monoclonal antibody; Ebola virus; Virology; Antibody; Biology; Virus; Medicine; Immunology","score_opus":0.04606011393988373,"score_gpt":0.49258188617251275,"score_spread":0.446521772232629,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404691142","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.54920703,0.0053093345,0.44132552,0.0012755217,0.0007708661,0.00031696464,0.000015760452,0.00010317459,0.0016758288],"genre_scores_gemma":[0.16855854,0.0009002996,0.8284635,0.00061201316,0.0003570521,0.000071822906,0.00030403805,0.000046281115,0.0006864688],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99815285,0.00084199343,0.0002510472,0.0004207886,0.000077925135,0.0002553651],"domain_scores_gemma":[0.9994174,0.0001846752,0.000022014072,0.00026397523,0.000057038345,0.00005484485],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089583197,0.00013338678,0.000281147,0.0003443852,0.00004179669,0.000023737197,0.00008374078,0.00017984357,0.00015823526],"category_scores_gemma":[0.0005172351,0.00010850099,0.000117709584,0.0005276378,0.00012936653,0.000037133184,0.000085289845,0.0004663631,0.00005969343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008122075,0.000062251114,0.0015922929,0.00002916156,0.00009335079,0.00011461014,0.000053075186,0.000012299393,0.9247347,0.00039995453,0.000079442674,0.07274765],"study_design_scores_gemma":[0.0005148792,0.00022245981,0.0034427252,0.00013037775,0.00004881902,0.000060058894,0.000053935073,0.0026712106,0.9557708,0.0032225703,0.03369297,0.00016918554],"about_ca_topic_score_codex":0.00052497315,"about_ca_topic_score_gemma":0.000010770149,"teacher_disagreement_score":0.38713798,"about_ca_system_score_codex":0.00007022931,"about_ca_system_score_gemma":0.00009550746,"threshold_uncertainty_score":0.44245422},"labels":[],"label_agreement":null},{"id":"W4404691980","doi":"10.1007/978-1-0716-4256-6_4","title":"Validation of Marburg Virus Inactivation by AVL Buffer","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Marburg virus; Titer; Virology; Virus; Virus inactivation; Ebola virus; RNA; Cytotoxic T cell; Biology; Chemistry; In vitro; Biochemistry","score_opus":0.03650632881582808,"score_gpt":0.4795361203308092,"score_spread":0.4430297915149811,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404691980","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2075527,0.00089874753,0.78869045,0.00043488492,0.00014737419,0.00017715567,0.00000681817,0.000025342137,0.0020665105],"genre_scores_gemma":[0.6873957,0.00024314545,0.31092745,0.00026356775,0.00006892203,0.000071274626,0.00014623374,0.000031647145,0.00085209793],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99886686,0.0005214293,0.00020719183,0.00019809102,0.000067443165,0.00013898188],"domain_scores_gemma":[0.99961454,0.00014008634,0.000023628447,0.00013788004,0.00005324285,0.000030615432],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009084484,0.00007380703,0.0001861026,0.00028596577,0.000013619212,0.000007416647,0.000038745013,0.00014571154,0.0001833608],"category_scores_gemma":[0.000283914,0.000060559345,0.00006307189,0.00044035507,0.00006863239,0.000027875134,0.000035696266,0.00021475954,0.00000918594],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030577776,0.000048392027,0.00079602335,0.000053073873,0.00003228663,0.000010807694,0.000025847743,0.000004927375,0.9343679,0.0019561164,0.0001822464,0.062491834],"study_design_scores_gemma":[0.00020633874,0.0002455134,0.0004353164,0.000036909863,0.000017844415,0.00001562362,0.000011849416,0.00097550964,0.983972,0.003351576,0.010677836,0.000053698506],"about_ca_topic_score_codex":0.00024620688,"about_ca_topic_score_gemma":0.0000013148266,"teacher_disagreement_score":0.479843,"about_ca_system_score_codex":0.000068700625,"about_ca_system_score_gemma":0.000044953395,"threshold_uncertainty_score":0.24695385},"labels":[],"label_agreement":null},{"id":"W4404692348","doi":"10.1007/978-1-0716-4256-6_14","title":"Evaluating Countermeasures Against Marburg Virus Using a Mouse Model","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral Infections and Outbreaks Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Marburg virus; Virology; Virus; Biology; Immune system; Immunology; Animal model; Viral replication; Disease; Medicine; Ebola virus; Pathology","score_opus":0.19282897585417336,"score_gpt":0.5692345845753759,"score_spread":0.37640560872120254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404692348","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3124444,0.0013161119,0.6847363,0.0001309761,0.00011994343,0.00021249124,0.000008162492,0.000054834876,0.0009767613],"genre_scores_gemma":[0.12730274,0.000121967,0.87131125,0.00060755725,0.000073170755,0.00004703662,0.000016986689,0.00004398325,0.00047533383],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99800915,0.00082273484,0.00028568727,0.00038904624,0.00014329911,0.00035010776],"domain_scores_gemma":[0.999442,0.00012283138,0.00002452223,0.00024844374,0.000087337656,0.00007490789],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025972868,0.0001467706,0.00029393547,0.00040878536,0.000053233187,0.000033760058,0.00008045683,0.00019063702,0.00005123851],"category_scores_gemma":[0.00052568526,0.00012164744,0.0001307863,0.00037967734,0.000119830926,0.000031686868,0.000101212274,0.00045712193,0.000009963065],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000040956664,0.000038658985,0.00030637637,0.000066055705,0.0000567876,0.000085307765,0.00005617418,0.0061729755,0.94150895,0.00056432415,0.00001191663,0.051091503],"study_design_scores_gemma":[0.0002862138,0.00014723979,0.000021875336,0.000079798934,0.000033215478,0.000042864864,0.000016800688,0.7405025,0.2563655,0.002112269,0.00028873602,0.000102971106],"about_ca_topic_score_codex":0.00015249202,"about_ca_topic_score_gemma":0.000010985151,"teacher_disagreement_score":0.7343295,"about_ca_system_score_codex":0.00017984485,"about_ca_system_score_gemma":0.00022716641,"threshold_uncertainty_score":0.49606386},"labels":[],"label_agreement":null},{"id":"W4404840233","doi":"10.1007/978-1-0716-4236-8_14","title":"Studying Mitotic Phosphorylation in Drosophila","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microtubule and mitosis dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Institute for Research in Immunology and Cancer","funders":"","keywords":"Drosophila (subgenus); Mitosis; Cell biology; Phosphorylation; Biology; Genetics; Gene","score_opus":0.01869910030537125,"score_gpt":0.3627824229854681,"score_spread":0.34408332268009684,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404840233","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40022218,0.008988042,0.5890663,0.00017621998,0.00051048334,0.0002669572,0.0000053285894,0.000021749753,0.00074269733],"genre_scores_gemma":[0.69125575,0.0004998667,0.30728728,0.00039825263,0.00012084302,0.00008437335,0.00011459874,0.000049926897,0.00018909559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981858,0.0005628749,0.00032546092,0.000560514,0.000046749687,0.0003185943],"domain_scores_gemma":[0.9995499,0.000051232302,0.000032814467,0.00030739928,0.000021068396,0.000037539612],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009355657,0.00018129087,0.00021292368,0.00021735032,0.00002112923,0.000023197805,0.00019133094,0.00031153695,0.000012723391],"category_scores_gemma":[0.00018835504,0.00018230606,0.000096815,0.0003202835,0.000071249226,0.0000029295988,0.00013970924,0.00022923044,0.00000858255],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018503,0.00004056229,0.0031452153,0.00002654518,0.000026813199,0.00003906738,0.00006424954,0.00021471703,0.9754008,0.002671441,0.000022930863,0.018329142],"study_design_scores_gemma":[0.00066180393,0.00028525977,0.0017778685,0.000086258755,0.000024762117,0.000040486433,0.000080170175,0.0043377783,0.95569557,0.010444356,0.026080366,0.0004853122],"about_ca_topic_score_codex":0.000049953665,"about_ca_topic_score_gemma":0.00007021419,"teacher_disagreement_score":0.2910336,"about_ca_system_score_codex":0.00004261851,"about_ca_system_score_gemma":0.00006300314,"threshold_uncertainty_score":0.7434225},"labels":[],"label_agreement":null},{"id":"W4404926332","doi":"10.1007/978-1-0716-4160-6_7","title":"Rapid Generation of Recombinant Poxviruses Using CRISPR/Cas9 Gene Editing","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"CRISPR; Genome editing; Recombinant DNA; Biology; Cas9; Virology; Computational biology; Subgenomic mRNA; Gene; Genetics","score_opus":0.04961032831552845,"score_gpt":0.455908375968573,"score_spread":0.4062980476530445,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404926332","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20825392,0.013250774,0.7769043,0.000038204325,0.001320441,0.000115553055,0.0000064077335,0.000014675124,0.000095741125],"genre_scores_gemma":[0.24358185,0.00052473595,0.7552472,0.00009664171,0.0003810344,0.000018834622,0.00007080407,0.000043097672,0.00003585163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998438,0.00039446287,0.00038409224,0.0004454565,0.000057649326,0.00028036037],"domain_scores_gemma":[0.9995156,0.000037141966,0.000054621723,0.0003016639,0.000048390764,0.000042601998],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009080906,0.0001814189,0.00024092845,0.0001780884,0.000027907872,0.000015896218,0.00015069469,0.00024441554,0.000019616089],"category_scores_gemma":[0.0002610529,0.00017944444,0.00012409483,0.00021610697,0.00007146794,0.00000297244,0.00011979889,0.00013652096,0.0000012277986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007692362,0.000018454022,0.0002479996,0.000043009448,0.000046988003,0.000014065295,0.000037884492,0.0017641805,0.96831065,0.0003606937,0.000056479792,0.029091923],"study_design_scores_gemma":[0.0001730263,0.00015435432,0.000034346194,0.000029378063,0.000025138754,0.000045171048,0.000024241761,0.017356679,0.9727017,0.00038139138,0.008896279,0.00017825824],"about_ca_topic_score_codex":0.00003320187,"about_ca_topic_score_gemma":0.000006923748,"teacher_disagreement_score":0.03532792,"about_ca_system_score_codex":0.000020496129,"about_ca_system_score_gemma":0.000057359684,"threshold_uncertainty_score":0.7317532},"labels":[],"label_agreement":null},{"id":"W4404926489","doi":"10.1007/978-1-0716-4160-6_9","title":"Use of a Poxvirus K3 Ortholog as a Positive Selection Marker for Construction of Recombinant Vaccinia Virus with Modified Host Range","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Vaccinia; Biology; Recombinant DNA; Virology; Virus; Host (biology); Gene; Orthopoxvirus; Poxviridae; Virulence; Mutant; Genetics","score_opus":0.028570295951427006,"score_gpt":0.3701225836951416,"score_spread":0.3415522877437146,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404926489","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5488317,0.0020951799,0.44728133,0.00011067013,0.0005137064,0.0007652275,0.00014186415,0.00003740204,0.00022291754],"genre_scores_gemma":[0.5978195,0.00043462258,0.40060583,0.0001392613,0.000017933198,0.00027763055,0.00015402805,0.000056918285,0.0004942899],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676716,0.0018898787,0.00044000562,0.000456691,0.000031372987,0.00041489827],"domain_scores_gemma":[0.99850893,0.00093206693,0.00014246009,0.00022132332,0.00016885123,0.000026373398],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011131738,0.00020490795,0.00052818743,0.00048067543,0.000049460403,0.000009580866,0.00014199901,0.0004666241,0.000084388645],"category_scores_gemma":[0.0006305287,0.00016182107,0.00013190656,0.00044717637,0.00041980523,0.00006394682,0.000071011695,0.0003655045,0.000008421588],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0034758982,0.00009229708,0.0017849887,0.00006746304,0.00037516275,0.000021824073,0.00013604747,0.000005357229,0.93618053,0.010086276,0.000031342242,0.047742832],"study_design_scores_gemma":[0.0013211896,0.0022756956,0.0037058196,0.000091886744,0.00008409528,0.0002995727,0.00004404927,0.000110279776,0.9855796,0.003515848,0.0027865802,0.00018535905],"about_ca_topic_score_codex":0.00086881773,"about_ca_topic_score_gemma":0.00010418011,"teacher_disagreement_score":0.04939911,"about_ca_system_score_codex":0.000051732866,"about_ca_system_score_gemma":0.00017033657,"threshold_uncertainty_score":0.65988714},"labels":[],"label_agreement":null},{"id":"W4405380074","doi":"10.1007/978-1-0716-4338-9_5","title":"Ultracentrifugation Purification of Cache Valley Virus Using Iodixanol","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Parvovirus B19 Infection Studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences","funders":"","keywords":"Iodixanol; Cache; Ultracentrifuge; Chemistry; Virology; Chromatography; Computer science; Biology; Medicine; Parallel computing","score_opus":0.0765733407926678,"score_gpt":0.4755712815570561,"score_spread":0.39899794076438827,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405380074","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1716529,0.0056940666,0.8208059,0.00019317542,0.00035750214,0.00025635472,0.0000049886808,0.000053092022,0.000982024],"genre_scores_gemma":[0.27353048,0.00042550842,0.7256988,0.00014895762,0.00006114004,0.00003466604,0.000018044799,0.000022279755,0.000060082955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99849474,0.0006458236,0.00035437068,0.0002679226,0.00007356881,0.00016359791],"domain_scores_gemma":[0.999395,0.00021832081,0.00007218115,0.0002055488,0.00007881651,0.000030143452],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010662471,0.00011125344,0.00029531083,0.00033569473,0.00002357011,0.0000056889326,0.000048190228,0.00016806868,0.00004686236],"category_scores_gemma":[0.00072422804,0.00009900998,0.00009191401,0.0004995426,0.000120915574,0.00002496225,0.000027362927,0.00019478473,0.000022631157],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028229544,0.000048761718,0.0042114737,0.00009946836,0.00008972829,0.00001632912,0.00017048685,0.00008449751,0.97564685,0.0016056272,0.000020339647,0.017978188],"study_design_scores_gemma":[0.00033077507,0.000053425254,0.0015303215,0.00006964206,0.00010239356,0.000055030796,0.000041530857,0.0030702439,0.9842073,0.0018119569,0.0086316215,0.00009577286],"about_ca_topic_score_codex":0.00014489442,"about_ca_topic_score_gemma":0.000004848478,"teacher_disagreement_score":0.10187759,"about_ca_system_score_codex":0.00010543712,"about_ca_system_score_gemma":0.000077138706,"threshold_uncertainty_score":0.403751},"labels":[],"label_agreement":null},{"id":"W4405380145","doi":"10.1007/978-1-0716-4338-9_3","title":"A Serological Assay for the Detection of Antibodies Generated Against California Serogroup Virus Infection","year":2024,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Vector-Borne Animal Diseases","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Serology; Virology; Antibody; Biology; Microbiology; Immunology","score_opus":0.03927288945244969,"score_gpt":0.35632349000984487,"score_spread":0.3170506005573952,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405380145","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.73611563,0.0028012572,0.26018894,0.00022226431,0.00020965583,0.00028650585,0.00008340976,0.000069346555,0.000023002844],"genre_scores_gemma":[0.98354536,0.00045000864,0.015416312,0.00028585427,0.000114105256,0.00011930504,0.000058961392,0.0000022592235,0.000007840133],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981509,0.0010035019,0.0002461129,0.00031945886,0.000053829717,0.0002262252],"domain_scores_gemma":[0.9989002,0.000897059,0.000054220243,0.000057842546,0.000059552865,0.000031130116],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011108308,0.00013560143,0.0002043211,0.000032198834,0.000086480395,0.00002892621,0.00013462741,0.00019509159,0.000029734452],"category_scores_gemma":[0.00054488506,0.000046771118,0.00016730925,0.00047014264,0.00012196812,0.000026713227,0.00006558936,0.00013484377,0.0000043769815],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043401575,0.00003248252,0.003367812,0.000012016917,0.00003448597,0.000003490853,0.000008426184,0.000053879066,0.8385405,0.00028305614,0.000007610647,0.15761283],"study_design_scores_gemma":[0.00016989344,0.0010303372,0.12398921,0.000026739124,0.000086173495,0.000010755727,0.000051005572,0.015278748,0.82999796,0.004934081,0.024146346,0.0002787409],"about_ca_topic_score_codex":0.00043036396,"about_ca_topic_score_gemma":0.0009123818,"teacher_disagreement_score":0.24742971,"about_ca_system_score_codex":0.000024817899,"about_ca_system_score_gemma":0.000008924372,"threshold_uncertainty_score":0.19072708},"labels":[],"label_agreement":null},{"id":"W4405982968","doi":"10.1007/978-1-0716-4310-5_3","title":"Multicolor Cell Lineage Tracing Using MAGIC Markers Strategies","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience and Neural Engineering","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Agence Nationale de la Recherche","keywords":"Electroporation; In utero; Biology; Progenitor cell; Lineage (genetic); MAGIC (telescope); Embryonic stem cell; Neuroscience; Computational biology; Cell biology; Stem cell; Genetics; Gene; Physics; Fetus","score_opus":0.048550168397491954,"score_gpt":0.4257124761848742,"score_spread":0.37716230778738224,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4405982968","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.34469816,0.00007513479,0.6523222,0.000056769557,0.0005204751,0.00015596558,0.000001433781,0.000048287704,0.0021215933],"genre_scores_gemma":[0.562911,0.00002844511,0.4356867,0.0011649888,0.000013163874,0.000011469711,3.6410628e-7,0.000016263963,0.00016762615],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978254,0.00083626003,0.000285644,0.0005587059,0.000063411535,0.00043057563],"domain_scores_gemma":[0.9991091,0.00052790856,0.000055498993,0.00025419384,0.000010910755,0.00004240515],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005673365,0.00017908074,0.00023944401,0.00034127035,0.000070398426,0.000049424045,0.00034730244,0.00011728848,0.000011405972],"category_scores_gemma":[0.0007979553,0.00016879263,0.000074810014,0.000790463,0.0001768191,0.00010080657,0.00013517476,0.00031703443,0.0000031991044],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013099124,0.00002624202,0.00007736207,0.000026055643,8.797417e-7,0.0000859786,0.000027332466,0.0041659633,0.9912708,0.0024137313,0.0000010049433,0.0018915811],"study_design_scores_gemma":[0.00024266764,0.000045798097,0.00006763572,0.000018182713,0.000006272646,0.000010887899,0.000055051936,0.06499534,0.93295395,0.0011565414,0.00030581283,0.00014187786],"about_ca_topic_score_codex":0.000018445415,"about_ca_topic_score_gemma":0.0000013075062,"teacher_disagreement_score":0.21821281,"about_ca_system_score_codex":0.000040214676,"about_ca_system_score_gemma":0.00006374405,"threshold_uncertainty_score":0.68831635},"labels":[],"label_agreement":null},{"id":"W4406323442","doi":"10.1007/978-1-0716-4314-3_16","title":"Negative Staining Electron Microscopy of a Highly Flexible Sec1/Munc18 Protein Complex Stabilized by Glutaraldehyde Crosslinking","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; University of Toronto","funders":"","keywords":"Glutaraldehyde; Electron microscope; Negative stain; Staining; Biophysics; Materials science; Polymer science; Chemistry; Biology; Chromatography; Optics; Physics","score_opus":0.012981094361717327,"score_gpt":0.4504015098048205,"score_spread":0.43742041544310317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406323442","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25257924,0.0014244382,0.74463516,0.00016885262,0.000021729209,0.00070013973,0.00004122982,0.000036107325,0.0003930887],"genre_scores_gemma":[0.17040087,0.00010475508,0.8280741,0.00044886017,0.000014247935,0.00035656782,0.000222232,0.00003483191,0.00034352212],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99741066,0.0006596105,0.00058110984,0.0007027209,0.00006246272,0.00058346376],"domain_scores_gemma":[0.99893063,0.00007125652,0.00024172515,0.0005747505,0.00013572663,0.000045904904],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00075315806,0.00029787046,0.00047726522,0.00015902583,0.000104046885,0.00001718173,0.00043902086,0.00034719738,0.000012740314],"category_scores_gemma":[0.000255299,0.00031038022,0.0001340479,0.0005294149,0.0003645997,0.000004781934,0.00024354042,0.0003119037,5.587871e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020023755,0.00009740912,0.00031190054,0.00003857679,0.00005519662,6.375358e-7,0.000033152475,0.000052558644,0.99102306,0.0055084596,0.00013590508,0.002542888],"study_design_scores_gemma":[0.0007622417,0.00044014677,0.000028182765,0.00003869643,0.00001493253,0.0000018904581,0.000035800327,0.00008311397,0.95215964,0.02141065,0.024778986,0.00024573394],"about_ca_topic_score_codex":0.00009117529,"about_ca_topic_score_gemma":0.00001828504,"teacher_disagreement_score":0.08343895,"about_ca_system_score_codex":0.00008507715,"about_ca_system_score_gemma":0.00018740959,"threshold_uncertainty_score":0.99993485},"labels":[],"label_agreement":null},{"id":"W4406482670","doi":"10.1007/7651_2024_584","title":"RNA Interference Approaches to Study Epidermal Cell Adhesion","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Western University","funders":"","keywords":"RNA interference; RNA; Chemistry; Computational biology; Cell biology; Biology; Biochemistry; Gene","score_opus":0.07051657831926611,"score_gpt":0.3823897686048985,"score_spread":0.3118731902856324,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406482670","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49095654,0.000541292,0.5053542,0.00015377629,0.00021008289,0.0003249446,0.0000026747487,0.000008999719,0.0024474575],"genre_scores_gemma":[0.79287106,0.000027983633,0.20549147,0.0009825234,0.000032821437,0.00012476738,0.00002076902,0.000014622474,0.000433955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971027,0.001296037,0.00040262222,0.0007673853,0.000051460112,0.00037983854],"domain_scores_gemma":[0.99913263,0.000054909808,0.0000639841,0.00062915834,0.000047738766,0.000071579685],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00091849815,0.0002505272,0.00032302714,0.00024729426,0.000049128266,0.000019297344,0.0005531196,0.00025226158,0.000020660978],"category_scores_gemma":[0.00028740393,0.0002344019,0.00011045427,0.00031022407,0.00006892808,0.0000025906243,0.0005733304,0.00019882695,0.00001570709],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013266745,0.00025954927,0.0076329065,0.000011285415,0.000047968435,0.000012783083,0.00011323731,0.000079624726,0.9535991,0.00027679824,0.00011741068,0.037716646],"study_design_scores_gemma":[0.00053513213,0.0010321831,0.0020333654,0.000016835094,0.000021064863,0.0000028683328,0.00036100726,0.00008253636,0.99279165,0.0012917096,0.0015876692,0.00024400406],"about_ca_topic_score_codex":0.000046894736,"about_ca_topic_score_gemma":0.000032948075,"teacher_disagreement_score":0.30191454,"about_ca_system_score_codex":0.000021543881,"about_ca_system_score_gemma":0.000053286694,"threshold_uncertainty_score":0.9558632},"labels":[],"label_agreement":null},{"id":"W44069025","doi":"10.1007/978-1-60761-459-3_2","title":"Measurement of Plasma/Serum Acylcarnitines Using Tandem Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism and Genetic Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa; Children's Hospital of Eastern Ontario","funders":"","keywords":"Tandem mass spectrometry; Electrospray ionization; Mass spectrometry; Chemistry; Chromatography","score_opus":0.027809802559180297,"score_gpt":0.36236098308079706,"score_spread":0.33455118052161675,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W44069025","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33033907,0.0040263273,0.66347075,0.00007588922,0.00018452968,0.00016047213,0.000004926754,0.000006941426,0.001731106],"genre_scores_gemma":[0.42709556,0.00018029453,0.5723968,0.00021776624,0.000057559533,0.0000051175366,0.00001075541,0.000015030879,0.000021068114],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99776995,0.00076288206,0.00044199734,0.00047219993,0.00015169951,0.00040124354],"domain_scores_gemma":[0.9991856,0.000015074776,0.00015978854,0.0004564053,0.000116491356,0.00006660036],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014098051,0.00023162772,0.00039554908,0.0001964143,0.000030064035,0.000007530376,0.00031003536,0.0002729755,0.000022938313],"category_scores_gemma":[0.0004996219,0.00022392653,0.00015035123,0.00030292125,0.00011916384,0.000001996944,0.00007204555,0.00012688135,0.0000011113746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037033737,0.00006401749,0.0049966364,0.000010020758,0.000045388213,0.0000036998392,0.000011913125,0.00020183381,0.973795,0.00066062296,0.000010944498,0.020162882],"study_design_scores_gemma":[0.0007971652,0.00031084684,0.0057060397,0.0000164723,0.000034733413,0.0000105500385,0.00005132219,0.00018321234,0.9851511,0.0050136484,0.002474635,0.00025026104],"about_ca_topic_score_codex":0.00001123141,"about_ca_topic_score_gemma":0.000007719905,"teacher_disagreement_score":0.09675649,"about_ca_system_score_codex":0.000010598711,"about_ca_system_score_gemma":0.00009179887,"threshold_uncertainty_score":0.9131459},"labels":[],"label_agreement":null},{"id":"W4406970048","doi":"10.1007/978-1-0716-4350-1_13","title":"Extraction, Annotation, and Purification of Resin Glycosides from the Morning Glory Family (Convolvulaceae)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Natural product bioactivities and synthesis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; Michael Smith Health Research BC","funders":"","keywords":"Convolvulaceae; Glory; Morning; Glycoside; Extraction (chemistry); Chromatography; Annotation; Chemistry; Botany; Biology; Organic chemistry; Physics; Bioinformatics","score_opus":0.01750265677959377,"score_gpt":0.36319866899291514,"score_spread":0.34569601221332136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4406970048","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61754876,0.012452581,0.36829132,0.001037168,0.00018030606,0.00017615964,0.000013890904,0.0000063189264,0.00029352107],"genre_scores_gemma":[0.66796875,0.0007364903,0.33033925,0.0006377873,0.00006264138,0.000030538937,0.00007149725,0.000012104765,0.00014094326],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981684,0.00097417075,0.0002891815,0.000380713,0.00004336584,0.00014414985],"domain_scores_gemma":[0.99910474,0.00027671884,0.0001256905,0.0003726772,0.0001030824,0.00001707872],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009008831,0.00012549644,0.0001862488,0.000069223715,0.000066192406,0.00001279678,0.00016831188,0.0002048132,0.0000040244645],"category_scores_gemma":[0.0011752145,0.00009849765,0.000049470782,0.00021369767,0.00022439202,0.000004406031,0.00008716516,0.0001355638,3.1822182e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000081336584,0.000017741,0.0039325166,0.000009095396,0.000050432405,5.615756e-7,0.00004031369,0.000021774913,0.94871575,0.0013440603,0.00013190015,0.04565452],"study_design_scores_gemma":[0.00022744434,0.000049845217,0.0309468,0.000020074718,0.000026851672,0.0000017307126,0.00036093657,0.00009365066,0.94968855,0.0066734673,0.011798815,0.00011182442],"about_ca_topic_score_codex":0.00029614195,"about_ca_topic_score_gemma":0.000031516003,"teacher_disagreement_score":0.050420012,"about_ca_system_score_codex":0.000012167297,"about_ca_system_score_gemma":0.000055235167,"threshold_uncertainty_score":0.40166175},"labels":[],"label_agreement":null},{"id":"W4407099395","doi":"10.1007/978-1-0716-4276-4_7","title":"Fusion Transcript Detection from Short-Read RNA-Seq","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill Genome Centre; McGill University","funders":"","keywords":"Computational biology; RNA-Seq; Computer science; Biology; Genetics; Transcriptome; Gene; Gene expression","score_opus":0.018603892428761554,"score_gpt":0.3562276111820263,"score_spread":0.33762371875326475,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407099395","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.39398462,0.0047677066,0.598501,0.0001499132,0.0005550048,0.00016792442,0.000016314032,0.0000057918633,0.0018517028],"genre_scores_gemma":[0.71721447,0.00070774445,0.28066227,0.00084371434,0.00010073272,0.000088056695,0.0000673566,0.000024986579,0.0002906755],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981458,0.0006008395,0.00031977418,0.0005882943,0.000042951586,0.0003023288],"domain_scores_gemma":[0.9993851,0.000050574105,0.000041563653,0.00042994658,0.000051931434,0.000040866747],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048156676,0.00021719163,0.00028488057,0.00012611206,0.000070534385,0.000011296364,0.00024936008,0.00035530847,0.000015763111],"category_scores_gemma":[0.00016956878,0.00021297188,0.0001425543,0.00019261724,0.0001196154,4.839967e-7,0.00016961168,0.00015282274,0.0000019573063],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000068135676,0.000032475822,0.0013420034,0.0000054685224,0.000085170555,0.0000030516462,0.000029379318,0.000052161617,0.87434715,0.00030278435,0.000021483631,0.12371072],"study_design_scores_gemma":[0.0004258294,0.00013367644,0.002630315,0.000009771405,0.000034994093,0.0000019447168,0.00005218845,0.00012550289,0.9491652,0.0089420825,0.03827329,0.00020517175],"about_ca_topic_score_codex":0.00020203128,"about_ca_topic_score_gemma":0.00029621294,"teacher_disagreement_score":0.32322982,"about_ca_system_score_codex":0.00002292466,"about_ca_system_score_gemma":0.000043013493,"threshold_uncertainty_score":0.8684741},"labels":[],"label_agreement":null},{"id":"W4407099660","doi":"10.1007/978-1-0716-4276-4_11","title":"Exploring Extracellular Vesicle Transcriptomic Diversity Through Long-Read Nanopore Sequencing","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Nanopore sequencing; Extracellular vesicles; Extracellular vesicle; Nanopore; Diversity (politics); Computational biology; Biology; Cell biology; Microvesicles; Nanotechnology; DNA sequencing; Genetics; Materials science; Gene; Political science","score_opus":0.07591865155786391,"score_gpt":0.37091173116907916,"score_spread":0.29499307961121524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407099660","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43661827,0.006689527,0.5545571,0.00010698485,0.00039568308,0.000253732,0.000009101171,0.000034078417,0.0013355439],"genre_scores_gemma":[0.60932374,0.00048295452,0.38860223,0.0006384778,0.00007547515,0.00010033866,0.0001041219,0.00005029365,0.00062239915],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964396,0.0012448252,0.00052531593,0.0009996301,0.0001210114,0.0006696296],"domain_scores_gemma":[0.9986966,0.00006942635,0.000119387376,0.0009330252,0.00007805961,0.00010346544],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001227257,0.00037956718,0.000419223,0.00018722755,0.00021308994,0.000024275741,0.00074491394,0.00037895853,0.000039968243],"category_scores_gemma":[0.0004112541,0.00042110484,0.00027906385,0.00045560108,0.00033426544,0.000019611281,0.0007543265,0.0003449622,0.000007761835],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011519908,0.00009373833,0.009136221,0.00006225353,0.00010963982,0.00012965988,0.00018936905,0.00018949698,0.9747472,0.005367735,0.000033640754,0.009825858],"study_design_scores_gemma":[0.0010145426,0.00012293231,0.0010487091,0.00005562607,0.00007411091,0.000015231046,0.00027526784,0.00015451598,0.9819818,0.008547118,0.0062685832,0.00044156882],"about_ca_topic_score_codex":0.00013850402,"about_ca_topic_score_gemma":0.00004795592,"teacher_disagreement_score":0.17270546,"about_ca_system_score_codex":0.0001600886,"about_ca_system_score_gemma":0.00017377763,"threshold_uncertainty_score":0.9998241},"labels":[],"label_agreement":null},{"id":"W4407100874","doi":"10.1007/978-1-0716-4276-4_8","title":"RNA-Seq and Gene Set Enrichment Analysis (GSEA) in Peripheral Blood Mononuclear Cells (PBMCs)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Peripheral blood mononuclear cell; Gene; Peripheral blood; Computational biology; RNA-Seq; Biology; RNA; Transcriptome; Gene expression; Immunology; Genetics; In vitro","score_opus":0.012186904721303935,"score_gpt":0.37781444354766214,"score_spread":0.3656275388263582,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407100874","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.23070143,0.004833524,0.76269275,0.000210928,0.00015299575,0.00044323315,0.000023797178,0.000014846097,0.0009264992],"genre_scores_gemma":[0.34144294,0.0029945583,0.6523416,0.0015884432,0.00007333881,0.00027837674,0.0002492192,0.000084058636,0.0009474524],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959235,0.001660159,0.00051943416,0.0010856292,0.00013657134,0.00067466113],"domain_scores_gemma":[0.9988883,0.000058098158,0.00009278421,0.0007592378,0.000080276004,0.000121307974],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015039826,0.0003372722,0.0005683062,0.0008018147,0.00006046157,0.000037582515,0.00042857302,0.00060835993,0.00005417684],"category_scores_gemma":[0.00023451075,0.0003607248,0.00023169671,0.0013416965,0.00019416388,0.0000037511256,0.000598497,0.00042809543,0.0000021581504],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001284467,0.000110935376,0.00080222473,0.000023383875,0.00063793,0.00006761506,0.000048488964,0.002485507,0.98809326,0.00065568526,0.00004136017,0.0069051567],"study_design_scores_gemma":[0.0015227414,0.0003063236,0.00048526278,0.000013689642,0.00021923152,0.000009332801,0.00006691368,0.002317707,0.989493,0.0014465306,0.0037697058,0.00034952266],"about_ca_topic_score_codex":0.00032219695,"about_ca_topic_score_gemma":0.00021053971,"teacher_disagreement_score":0.110741526,"about_ca_system_score_codex":0.000092611685,"about_ca_system_score_gemma":0.0001618275,"threshold_uncertainty_score":0.9998845},"labels":[],"label_agreement":null},{"id":"W4407875477","doi":"10.1007/978-1-0716-4284-9_6","title":"Sensing of Long-Chain Fatty Acyl-CoA Esters by AMPK","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolism, Diabetes, and Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; McMaster University","funders":"","keywords":"AMPK; Chemistry; Acyl-CoA; Chain (unit); Biochemistry; Enzyme; Physics","score_opus":0.010450097940409917,"score_gpt":0.3711322486625355,"score_spread":0.3606821507221256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4407875477","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17487577,0.08431118,0.739388,0.0000636948,0.00045002525,0.00018475475,0.000018839683,0.000009806905,0.000697955],"genre_scores_gemma":[0.14956595,0.012996094,0.83127147,0.005026488,0.00015221637,0.00005604193,0.00031431657,0.00007975877,0.00053768535],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997394,0.0011286297,0.00044037803,0.0005616515,0.00006779296,0.000407507],"domain_scores_gemma":[0.99907655,0.000072271054,0.00013824903,0.00057402387,0.000081517464,0.000057368234],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010596538,0.0002379092,0.00045609823,0.00015273645,0.00003347976,0.000009691459,0.00029290325,0.00039522033,0.000015436106],"category_scores_gemma":[0.00043380313,0.00023541319,0.00016228759,0.00028796186,0.00025882112,0.0000021702438,0.00020714638,0.00017597277,0.0000012675483],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000396214,0.00003082395,0.0017032817,0.000032012817,0.00007426809,0.0000035995095,0.000020141408,0.000028719733,0.7679487,0.00033678333,0.00025012507,0.22953191],"study_design_scores_gemma":[0.00062398234,0.00008895625,0.00026243296,0.000027530175,0.000033619384,0.0000031008608,0.000038493108,0.000079928126,0.940428,0.0016466914,0.056557734,0.00020950605],"about_ca_topic_score_codex":0.000058037927,"about_ca_topic_score_gemma":0.000029456769,"teacher_disagreement_score":0.2293224,"about_ca_system_score_codex":0.00002200833,"about_ca_system_score_gemma":0.00009574814,"threshold_uncertainty_score":0.9599871},"labels":[],"label_agreement":null},{"id":"W4408015051","doi":"10.1007/978-1-0716-4410-2_5","title":"Quantifying Rhinovirus Genomic and Negative-Strand RNA by RT-PCR","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Disease Management and Epidemiology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Rhinovirus; Virology; Biology; RNA; Molecular biology; Genetics; Virus; Gene","score_opus":0.05989974650651756,"score_gpt":0.39064516267568006,"score_spread":0.3307454161691625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408015051","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93521845,0.0035643652,0.05525611,0.0019537956,0.00013192689,0.00023938804,0.0000205531,0.000039213963,0.00357621],"genre_scores_gemma":[0.88993305,0.00072668894,0.10470756,0.004132576,0.000045024888,0.000045964043,0.00006524877,0.0000021921903,0.0003417024],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9978893,0.0010589352,0.00026782168,0.0004334543,0.000028155637,0.00032235828],"domain_scores_gemma":[0.9992147,0.0005962598,0.00006287552,0.00005888346,0.000014638591,0.00005264032],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00094345614,0.000155786,0.00031341682,0.000038030565,0.000095599906,0.0000199397,0.00021023097,0.00016631,0.000097904805],"category_scores_gemma":[0.00033676333,0.000071471164,0.00006965534,0.0002590898,0.00017820053,0.000024564442,0.00018119256,0.00014996158,0.0000054990514],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043710592,0.000021362317,0.029578177,0.000008067507,0.000024468452,0.000004491632,0.000009575731,0.0000017662912,0.86331046,0.010339925,0.00024415998,0.096413866],"study_design_scores_gemma":[0.001347657,0.0006059044,0.70089835,0.000058401016,0.000120627796,0.0000043679715,0.00045669262,0.001480754,0.06432389,0.13394399,0.095831424,0.00092793873],"about_ca_topic_score_codex":0.0003830742,"about_ca_topic_score_gemma":0.00014083985,"teacher_disagreement_score":0.79898655,"about_ca_system_score_codex":0.000017550528,"about_ca_system_score_gemma":0.0000049721775,"threshold_uncertainty_score":0.29145095},"labels":[],"label_agreement":null},{"id":"W4408015173","doi":"10.1007/978-1-0716-4410-2_7","title":"Assessment of Viral Replication in Rhinovirus-Infected Airway Epithelial Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Respiratory viral infections research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Rhinovirus; Virology; Replication (statistics); Airway; Viral replication; Biology; Medicine; Immunology; Virus","score_opus":0.03846599546253838,"score_gpt":0.5044786666209132,"score_spread":0.46601267115837486,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408015173","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40347722,0.00014340928,0.5885547,0.00018592553,0.00013034059,0.00054676004,0.0000042323386,0.000020209434,0.0069372165],"genre_scores_gemma":[0.45153147,0.000059880735,0.5474,0.00052391255,0.00002105826,0.00017239437,0.000018328703,0.000016521051,0.00025643382],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99668306,0.0019940776,0.0005421553,0.0004350486,0.00009423942,0.00025139193],"domain_scores_gemma":[0.9987624,0.00027010147,0.00008794379,0.0007279873,0.00011422689,0.000037310194],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026799862,0.000122889,0.00041849815,0.0009145292,0.000019601219,0.000005159861,0.00014066363,0.00024075212,0.000063713494],"category_scores_gemma":[0.0011533275,0.0001128989,0.00008663046,0.0010275198,0.00016874983,0.000022531774,0.00011529433,0.00044692933,0.000004463843],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000539782,0.00020061199,0.05350694,0.00004871321,0.000027016313,0.000012613995,0.00001103631,0.000054625598,0.90103245,0.010103742,0.000011311487,0.034936942],"study_design_scores_gemma":[0.0010936324,0.0004084681,0.07422721,0.00003749475,0.000014915547,0.00000241876,0.0000073815745,0.0011758347,0.9170387,0.003122602,0.0027955114,0.00007587764],"about_ca_topic_score_codex":0.00024419755,"about_ca_topic_score_gemma":0.000025745341,"teacher_disagreement_score":0.048054244,"about_ca_system_score_codex":0.00021883573,"about_ca_system_score_gemma":0.00028424396,"threshold_uncertainty_score":0.46038836},"labels":[],"label_agreement":null},{"id":"W4408114543","doi":"10.1007/978-1-0716-4442-3","title":"B-Cell Receptor Signaling","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Chronic Lymphocytic Leukemia Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Advanced Centre for Treatment, Research and Education in Cancer; Medizinische Fakultät der Albert-Ludwigs-Universität Freiburg; Homi Bhabha National Institute; Universität Ulm; University of Cape Town; Trakya Üniversitesi; Turun Yliopisto; Albert-Ludwigs-Universität Freiburg; University College London; Queen's University Belfast; Karolinska Institutet; Tata Memorial Centre; Queen's University; National and Kapodistrian University of Athens; Inselspital, Universitätsspital Bern","keywords":"Cell biology; Receptor; Computational biology; Biology; Genetics","score_opus":0.030320710080775776,"score_gpt":0.4307843679841451,"score_spread":0.40046365790336935,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408114543","genre_codex":"other","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000726852,0.009807739,0.3989847,0.00021005096,0.00056036084,0.00089760165,0.00002037042,0.00006566435,0.5893808],"genre_scores_gemma":[0.0000044689527,0.00025069734,0.5044346,0.0007193183,0.00013724479,0.000058046953,0.00021107457,0.000052648324,0.49413192],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9963315,0.0012670492,0.00064214267,0.00088902726,0.00022115587,0.00064913876],"domain_scores_gemma":[0.9975388,0.0010889703,0.00014932686,0.0009337624,0.00014276612,0.00014637383],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0021409688,0.00041367684,0.0011538072,0.0007290434,0.000030390755,0.000011439844,0.00040932075,0.0014613773,0.0006404739],"category_scores_gemma":[0.0012318642,0.00038542217,0.00032942867,0.0002966743,0.00028527,0.000008540191,0.00039793272,0.0013758712,0.000111969406],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":true,"study_design_scores_codex":[0.00040334702,0.00019095613,0.000021364724,0.002145328,0.00042087174,0.0013874369,0.00011153705,0.000026981184,0.89340955,0.012126097,0.045032028,0.044724476],"study_design_scores_gemma":[0.008474038,0.00037781612,3.9075601e-7,0.000814224,0.00018280654,0.00007181693,0.000012599299,0.0004894053,0.22836657,0.017805278,0.7429461,0.00045897427],"about_ca_topic_score_codex":0.00007114626,"about_ca_topic_score_gemma":0.0000020397613,"teacher_disagreement_score":0.69791406,"about_ca_system_score_codex":0.012214058,"about_ca_system_score_gemma":0.01799624,"threshold_uncertainty_score":0.99985975},"labels":[],"label_agreement":null},{"id":"W4408114612","doi":"10.1007/978-1-0716-4442-3_6","title":"High-Resolution Imaging of Intracellular Trafficking of B Cell Receptor Using Specific Hybridization Internalization Probe (SHIP)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Internalization; Intracellular; Cell biology; Receptor; Chemistry; Biophysics; Nanotechnology; Materials science; Biology; Biochemistry","score_opus":0.031425644948765305,"score_gpt":0.39455748262164364,"score_spread":0.3631318376728783,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408114612","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.321208,0.0017669968,0.67632276,0.0001299118,0.0001744977,0.00021061717,0.0000037700008,0.000007641902,0.00017578057],"genre_scores_gemma":[0.35842794,0.00017780873,0.64114594,0.00004762083,0.000029394352,0.000004858246,0.000077367484,0.000010905691,0.000078150115],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981232,0.0007619751,0.00053427374,0.00025934263,0.00011465126,0.0002065201],"domain_scores_gemma":[0.99929905,0.00013216892,0.0001758592,0.00018180227,0.00018002288,0.000031126572],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001026293,0.000120498415,0.00037593752,0.00046457085,0.000025366737,0.0000046176624,0.00011583915,0.000099403216,0.000051421852],"category_scores_gemma":[0.00022807917,0.000111268855,0.00008862004,0.0005309575,0.00017348539,0.000025079757,0.00008653765,0.00018849903,7.7109826e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002159542,0.000111260524,0.013528048,0.00028284217,0.000027656442,0.0000089387195,0.00008655918,0.0006630655,0.9635005,0.008846085,0.000008055637,0.01272102],"study_design_scores_gemma":[0.00056091294,0.000090602145,0.00062328146,0.0002679522,0.000027902066,0.0000067376122,0.000044947934,0.016989512,0.9782929,0.0020838454,0.0009339281,0.00007749876],"about_ca_topic_score_codex":0.00016855799,"about_ca_topic_score_gemma":0.0000021536603,"teacher_disagreement_score":0.037219938,"about_ca_system_score_codex":0.00007899723,"about_ca_system_score_gemma":0.00008341475,"threshold_uncertainty_score":0.45374122},"labels":[],"label_agreement":null},{"id":"W4408314570","doi":"10.1007/978-1-0716-4386-0_9","title":"Experimental Neurogenesis in the Embryos of the Gecko Paroedura picta","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ontario Brain Institute; University of Toronto","funders":"","keywords":"Gecko; Biology; Embryo; Neurogenesis; Zoology; Anatomy; Cell biology","score_opus":0.03941296764092507,"score_gpt":0.39536737251706433,"score_spread":0.3559544048761393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408314570","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9617104,0.00020119708,0.03573377,0.0005491479,0.00067489845,0.0004335536,0.000005124129,0.000013863832,0.000678071],"genre_scores_gemma":[0.98521066,0.000023355338,0.008533435,0.0061003426,0.000009057836,0.0000808824,2.6690427e-7,0.000014240574,0.000027781562],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9931406,0.005539504,0.0003957609,0.0004890369,0.0001270684,0.00030802275],"domain_scores_gemma":[0.99816483,0.0010977924,0.000104234714,0.000602213,0.0000118302805,0.000019115618],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00073968864,0.00017487428,0.00026820728,0.00017055156,0.000074163596,0.000013999615,0.0009753159,0.00009463104,0.000017519445],"category_scores_gemma":[0.0012956001,0.0001081529,0.00013103338,0.0010619388,0.00023434026,0.000017922714,0.00034095102,0.00024224274,0.0000017558276],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023037619,0.00013329348,0.000812453,0.0000069266835,0.0000020868931,0.000031652624,0.00007651161,0.00003859087,0.9579029,0.040285386,0.0000066903426,0.0006804481],"study_design_scores_gemma":[0.0002963435,0.000088642504,0.0016978399,0.000010837115,0.000008257486,0.000024637757,0.000056146862,0.00022615957,0.99501103,0.0021092363,0.00038910008,0.00008177305],"about_ca_topic_score_codex":0.000017944347,"about_ca_topic_score_gemma":0.0000039010415,"teacher_disagreement_score":0.03817615,"about_ca_system_score_codex":0.000016776648,"about_ca_system_score_gemma":0.000047137746,"threshold_uncertainty_score":0.44103473},"labels":[],"label_agreement":null},{"id":"W4408389248","doi":"10.1007/978-1-0716-4426-3","title":"Oncogene-Induced Senescence","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Center for Molecular Biosciences, University of Innsbruck; Medical Research Council; School of Liberal Arts; University of Ioannina; Hebrew University of Jerusalem; National Technical University of Athens; Zhejiang Chinese Medical University; Universität Innsbruck; Faculty of Health and Medical Sciences, University of Western Australia; Aristotle University of Thessaloniki; Deutsches Krebsforschungszentrum; Centre National de la Recherche Scientifique; University of Surrey; University of Dundee; Directorate for Mathematical and Physical Sciences; National and Kapodistrian University of Athens; Cambridge University Hospitals; Humanitas Research Hospital; Imperial College London; University of Cambridge; Cancer Research UK; Institute of Genetics; Rutgers, The State University of New Jersey; Umeå Centre for Microbial Research; Concern Foundation","keywords":"Senescence; Oncogene; Biology; Genetics; Cancer; Cell cycle","score_opus":0.03814818147724097,"score_gpt":0.4265197833752123,"score_spread":0.3883716018979713,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408389248","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000615966,0.009805954,0.5921354,0.00092558615,0.0022715526,0.0015011091,0.000048989044,0.00022173882,0.39247367],"genre_scores_gemma":[0.0001261299,0.0008076949,0.64703166,0.0035886597,0.00028814632,0.00007870435,0.00026270852,0.00009248566,0.34772378],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99606794,0.0011148265,0.00079426484,0.0011560159,0.0002018138,0.00066512066],"domain_scores_gemma":[0.997731,0.0004913542,0.00023719734,0.0011840588,0.00016928135,0.00018713006],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012248608,0.00061083183,0.001544147,0.00081578596,0.000051046176,0.000012267291,0.00046229287,0.0015570107,0.00015073048],"category_scores_gemma":[0.0010367958,0.0005772012,0.00037651858,0.00042732593,0.00025103978,0.000015940857,0.00025970466,0.0012545822,0.000044368488],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014112615,0.00010722794,0.00055300904,0.00045430256,0.00020906323,0.001207674,0.000076361415,0.0000010845702,0.78417677,0.00833618,0.0016703885,0.20306683],"study_design_scores_gemma":[0.0024542215,0.00084442884,0.00043497857,0.0018379537,0.0005356552,0.0003757125,0.000038952676,0.000100008845,0.36255,0.026793001,0.6025723,0.0014627731],"about_ca_topic_score_codex":0.00006574257,"about_ca_topic_score_gemma":0.00002193907,"teacher_disagreement_score":0.6009019,"about_ca_system_score_codex":0.00040038524,"about_ca_system_score_gemma":0.0017156198,"threshold_uncertainty_score":0.99973917},"labels":[],"label_agreement":null},{"id":"W4408673123","doi":"10.1007/978-1-0716-4366-2_17","title":"Cellular Investigation of Astrocytic Neuroendocrine Responses to Stress","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Stress Responses and Cortisol","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Neuroscience; Psychology","score_opus":0.040289475355599326,"score_gpt":0.39871634489929714,"score_spread":0.3584268695436978,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408673123","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57608384,0.00013579628,0.42280868,0.00037937556,0.00017023961,0.00018511104,0.000010631866,0.000017852184,0.00020844673],"genre_scores_gemma":[0.7550583,0.00005743141,0.24237283,0.0019958953,0.000010955834,0.000077273806,0.0000025943143,0.000015503148,0.00040922267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960292,0.0028026397,0.00036467006,0.00044659968,0.00007964564,0.00027724914],"domain_scores_gemma":[0.9984698,0.0009668444,0.00008239547,0.0003945763,0.000029904479,0.000056432113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015198365,0.00013534643,0.00026324918,0.00047945845,0.000031047915,0.0000101658125,0.00034173642,0.00004919426,0.00001732296],"category_scores_gemma":[0.004309017,0.00013094142,0.00006397316,0.00081256963,0.00016122809,0.000018782956,0.0002064271,0.00014870196,0.0000032827415],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027427706,0.00001947929,0.007445067,0.000019622168,0.0000032286714,0.000074074094,0.00002800757,0.00012034403,0.9694371,0.007733495,0.0000063138373,0.014838997],"study_design_scores_gemma":[0.000276701,0.00020832945,0.0030067698,0.000035495734,0.000007892652,0.000007494358,0.000020135843,0.00031372014,0.9909584,0.0042746,0.0008009238,0.00008956166],"about_ca_topic_score_codex":0.000042886048,"about_ca_topic_score_gemma":0.0000049338073,"teacher_disagreement_score":0.18043587,"about_ca_system_score_codex":0.000027529626,"about_ca_system_score_gemma":0.00008185819,"threshold_uncertainty_score":0.5339636},"labels":[],"label_agreement":null},{"id":"W4408673197","doi":"10.1007/978-1-0716-4366-2_19","title":"Functional Evaluation of Astrocytic Responses to Stress","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neuroscience and Neuropharmacology Research","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Stress (linguistics); Neuroscience; Psychology; Philosophy; Linguistics","score_opus":0.16970669024455143,"score_gpt":0.5452400679733429,"score_spread":0.3755333777287915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408673197","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76268786,0.000049173457,0.23505495,0.00059543067,0.000500366,0.00036746156,0.000007871048,0.000012973121,0.00072392117],"genre_scores_gemma":[0.96638376,0.0000142012605,0.03007292,0.0029303986,0.00001349308,0.00015435192,6.317539e-7,0.000008696594,0.00042154334],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99222577,0.006495647,0.00025276124,0.0005050186,0.00023679757,0.00028400443],"domain_scores_gemma":[0.9982678,0.0012929122,0.000045806883,0.00024603988,0.00010328811,0.000044147204],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.0028800624,0.00009270091,0.00017534019,0.000637057,0.000054156557,0.000007989664,0.00033546853,0.000069955946,0.00007937793],"category_scores_gemma":[0.008937078,0.00008647427,0.000044860255,0.0011518886,0.00026436796,0.000028164006,0.00020630684,0.0002016071,0.000009613614],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022674049,0.00006402572,0.0016685319,0.0000063134817,0.0000019985366,0.0000110264755,0.000013281447,0.0005048082,0.9832446,0.0029618205,0.000028100607,0.011268747],"study_design_scores_gemma":[0.00047133703,0.00019105911,0.0031118165,0.000008930159,0.000010806601,0.0000045067063,0.0000090330495,0.0014249315,0.99056077,0.0038554608,0.0002952536,0.000056091612],"about_ca_topic_score_codex":0.0000047353515,"about_ca_topic_score_gemma":0.0000013336007,"teacher_disagreement_score":0.20498204,"about_ca_system_score_codex":0.000051251038,"about_ca_system_score_gemma":0.00026943162,"threshold_uncertainty_score":0.99941105},"labels":[],"label_agreement":null},{"id":"W4408673207","doi":"10.1007/978-1-0716-4366-2","title":"Astrocytes","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Immune cells in cancer","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Joint Research Centre; Chengdu University; Institute for Basic Science; KU Leuven; Rheinische Friedrich-Wilhelms-Universität Bonn; Directorate for Biological Sciences; Univerza v Ljubljani; Universität Regensburg; Chengdu University of Traditional Chinese Medicine; Deutsches Zentrum für Neurodegenerative Erkrankungen; Centre National de la Recherche Scientifique; Universidade do Porto; McGill University; McGill University Health Centre; Korea Advanced Institute of Science and Technology; Institut National de la Santé et de la Recherche Médicale","keywords":"Chemistry","score_opus":0.014652759523281735,"score_gpt":0.36257007857805085,"score_spread":0.34791731905476914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408673207","genre_codex":"other","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":"other","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007783683,0.06931817,0.35683995,0.00010030817,0.0047347336,0.00043699503,0.00005551794,0.0000882234,0.5684183],"genre_scores_gemma":[0.000004531971,0.000410321,0.25500306,0.0007272237,0.000040215233,0.00009572647,0.0005237844,0.00005052667,0.74314463],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99564695,0.0021387793,0.0006741356,0.00085225975,0.000022645912,0.0006652506],"domain_scores_gemma":[0.99789506,0.000829979,0.00025519074,0.000926635,0.00007870681,0.0000144447085],"candidate_categories":["metaepi_narrow","research_integrity","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0011572258,0.0005279978,0.001090314,0.0005891808,0.000059582107,0.000008288254,0.0008466838,0.0024776268,0.0014322207],"category_scores_gemma":[0.00044293853,0.00052765064,0.0003039239,0.00016148367,0.0006160797,0.000013131677,0.0005463293,0.0017135413,0.0003361083],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100076766,0.000052612748,0.000046130215,0.00012748531,0.00057946186,0.000048538674,0.00005789288,0.000008082259,0.8273559,0.047939826,0.03359345,0.09009052],"study_design_scores_gemma":[0.0005775338,0.00009091087,0.0000052974756,0.0001327441,0.00006937637,0.000019806082,0.0000054051084,5.94914e-7,0.28057906,0.019448783,0.69874066,0.00032983898],"about_ca_topic_score_codex":0.000025999787,"about_ca_topic_score_gemma":0.000008031471,"teacher_disagreement_score":0.6651472,"about_ca_system_score_codex":0.00035964235,"about_ca_system_score_gemma":0.0007040498,"threshold_uncertainty_score":0.99971753},"labels":[],"label_agreement":null},{"id":"W4408673275","doi":"10.1007/978-1-0716-4366-2_16","title":"Development and Validation of Stress Paradigms to Study Astrocytes in Rodent Models of Stress Disorders","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Stress Responses and Cortisol","field":"Neuroscience","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Rodent; Stress (linguistics); Rodent model; Psychology; Neuroscience; Biology; Ecology; Philosophy; Endocrinology; Linguistics","score_opus":0.04336410295769852,"score_gpt":0.400774823476902,"score_spread":0.35741072051920353,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408673275","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6554731,0.00016139324,0.3439368,0.000022209468,0.000038306447,0.0002991629,0.000006096172,0.0000035411617,0.00005935066],"genre_scores_gemma":[0.85356873,0.00007693221,0.14622852,0.00003232352,9.404858e-7,0.00007899263,0.0000013078883,0.000004948962,0.0000072922817],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99786705,0.001104039,0.00041059245,0.0003603891,0.000083443054,0.00017448123],"domain_scores_gemma":[0.99935526,0.00031236373,0.000089082285,0.00020204378,0.00001634258,0.000024903426],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022232342,0.000110869936,0.0002778382,0.00033281004,0.000018128521,0.0000046591704,0.00020534097,0.00005797619,0.0000027676438],"category_scores_gemma":[0.0004003269,0.000104229104,0.00002351421,0.0004077973,0.00006397848,0.000021401529,0.00019075653,0.00007865438,9.091188e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00022407758,0.0004306203,0.0846529,0.0000356484,0.000014056382,0.000007035689,0.0013339855,0.009986917,0.7427432,0.0033279795,1.3376713e-7,0.15724343],"study_design_scores_gemma":[0.0004916277,0.00017163185,0.022543335,0.00004321619,0.0000058289693,3.081564e-7,0.0005469647,0.0009317302,0.9734065,0.0017604781,0.000018564198,0.00007983662],"about_ca_topic_score_codex":0.00015123426,"about_ca_topic_score_gemma":0.00018241032,"teacher_disagreement_score":0.23066327,"about_ca_system_score_codex":0.0000214263,"about_ca_system_score_gemma":0.000041974123,"threshold_uncertainty_score":0.42503396},"labels":[],"label_agreement":null},{"id":"W4408673320","doi":"10.1007/978-1-0716-4366-2_6","title":"An Astrocyte Transplantation Method to Investigate Astrocyte Development and Diversity in the Central Nervous System (CNS)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre; Montreal General Hospital","funders":"","keywords":"Astrocyte; Central nervous system; Transplantation; Neuroscience; Diversity (politics); Biology; Medicine; Internal medicine; Political science","score_opus":0.04313443001300376,"score_gpt":0.36716460022650094,"score_spread":0.32403017021349717,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408673320","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46772435,0.00001048564,0.53178716,0.00007407332,0.000114857416,0.00022245118,0.0000040591026,0.000018851502,0.00004373075],"genre_scores_gemma":[0.47598827,0.0000074471827,0.52191764,0.0020317105,0.000006479548,0.000033700813,0.0000020599655,0.000008212011,0.0000044813023],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9931736,0.0053681633,0.00030484173,0.00063157914,0.0001155915,0.00040623124],"domain_scores_gemma":[0.99911726,0.00049849064,0.000058363425,0.00022175486,0.000013430428,0.00009072975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013937732,0.0001876455,0.0002616851,0.00028578378,0.00017921529,0.000033825738,0.0004326917,0.000092798946,0.0000011962313],"category_scores_gemma":[0.00019937562,0.00015357161,0.0000334432,0.00053151755,0.000061069404,0.000042288448,0.00018330575,0.00020485756,0.000001432196],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097070835,0.000032657226,0.0012110799,0.000039122915,0.0000030499343,0.00016747652,0.0007302975,0.0004810196,0.96965945,0.015461696,5.2546943e-7,0.012116529],"study_design_scores_gemma":[0.00039162178,0.00013980224,0.011495057,0.0000297064,0.000016372864,0.000055888886,0.00011692772,0.0012013288,0.98589736,0.00031848773,0.00021162027,0.00012584474],"about_ca_topic_score_codex":0.0000533356,"about_ca_topic_score_gemma":0.00004496464,"teacher_disagreement_score":0.016237868,"about_ca_system_score_codex":0.000054959688,"about_ca_system_score_gemma":0.000053610114,"threshold_uncertainty_score":0.62624687},"labels":[],"label_agreement":null},{"id":"W4408673381","doi":"10.1007/978-1-0716-4366-2_18","title":"Morphological Investigation of Astrocytic Responses to Stress","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Traumatic Brain Injury and Neurovascular Disturbances","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Psychology","score_opus":0.047245311113505974,"score_gpt":0.4165560301477371,"score_spread":0.3693107190342311,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408673381","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.59990406,0.00029045637,0.39833206,0.00073122286,0.00008999682,0.00020859107,0.000003933777,0.00001409982,0.00042558266],"genre_scores_gemma":[0.38516793,0.000007654002,0.6131589,0.0015157646,0.0000070840083,0.000037268343,0.000007429198,0.0000045717497,0.00009338161],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979807,0.0012214975,0.00031603454,0.0002702487,0.000057717818,0.00015377016],"domain_scores_gemma":[0.9991049,0.00045772537,0.00004904571,0.00029882716,0.000041531635,0.00004792809],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009162329,0.000098340315,0.00034867518,0.00025926126,0.000014919302,0.0000026515022,0.00011572592,0.00012608974,0.000021476439],"category_scores_gemma":[0.0020126896,0.00008037208,0.000083382074,0.0004494924,0.0001791565,0.000008564293,0.000061007,0.00015024882,0.0000019201366],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00031791616,0.00004670804,0.057849012,0.00007976888,0.000044455937,0.000038737056,0.000072590294,0.000013684382,0.92395717,0.006227887,0.000030449257,0.011321629],"study_design_scores_gemma":[0.00063941715,0.00042872454,0.14903678,0.00013332293,0.000045166948,0.000019054014,0.000053837,0.00003606295,0.8415241,0.0075479303,0.00046606874,0.00006948896],"about_ca_topic_score_codex":0.000011892496,"about_ca_topic_score_gemma":0.0000017999847,"teacher_disagreement_score":0.21482685,"about_ca_system_score_codex":0.000023965475,"about_ca_system_score_gemma":0.00006842936,"threshold_uncertainty_score":0.32774785},"labels":[],"label_agreement":null},{"id":"W4408735709","doi":"10.1007/7651_2025_608","title":"Efficient Isolation and Ex Vivo Differentiation of Murine Satellite Cells from Healthy and Dystrophic Muscle","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Ex vivo; Satellite; Isolation (microbiology); Biology; Cell biology; Pathology; Medicine; In vivo; Genetics; Microbiology; Engineering; Aerospace engineering","score_opus":0.007806149479142156,"score_gpt":0.32611986443437335,"score_spread":0.3183137149552312,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408735709","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.673776,0.0032450866,0.32256302,0.00008230681,0.00009595207,0.00012288797,0.000009417707,0.0000034825619,0.0001018669],"genre_scores_gemma":[0.91312724,0.00065484096,0.085839435,0.00026715107,0.00001470102,0.00001191043,0.00006290496,0.000007421913,0.000014383456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985776,0.00059645664,0.00025581793,0.00038360394,0.000025782749,0.0001607361],"domain_scores_gemma":[0.99955827,0.000073410905,0.00009065096,0.00021573185,0.000029986468,0.000031955467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00028522205,0.00012716635,0.00022188053,0.00010186517,0.000031824748,0.0000039389083,0.00007300274,0.00022879936,0.0000078738085],"category_scores_gemma":[0.00007618508,0.0001232201,0.000038177765,0.000099973186,0.00016005548,0.0000010187638,0.00012481301,0.00008607598,2.3569505e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016743634,0.000054797223,0.0043391637,0.00003293698,0.00002848266,4.1833584e-7,0.00003380558,0.00014552352,0.97835636,0.0007669894,0.0000029226278,0.016071169],"study_design_scores_gemma":[0.0014007344,0.00042076016,0.09319795,0.00002460019,0.000034947676,7.31544e-7,0.00006067487,0.00338644,0.89200413,0.008446703,0.0008272698,0.00019504991],"about_ca_topic_score_codex":0.000086065156,"about_ca_topic_score_gemma":0.000026355448,"teacher_disagreement_score":0.23935127,"about_ca_system_score_codex":0.0000063750886,"about_ca_system_score_gemma":0.000023319673,"threshold_uncertainty_score":0.502477},"labels":[],"label_agreement":null},{"id":"W4408956344","doi":"10.1007/7651_2025_624","title":"Testicular Organoid Formation in Microwell Culture","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Organoid; Biology; Spheroid; Cell biology; Morphogenesis; Cell culture; Genetics","score_opus":0.013441569805329717,"score_gpt":0.37606738228830094,"score_spread":0.3626258124829712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408956344","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08274779,0.001691334,0.91025877,0.000536164,0.00024771586,0.000355189,0.0000010162308,0.000038977178,0.004123055],"genre_scores_gemma":[0.10701199,0.00006826923,0.8902756,0.0021693269,0.000028903785,0.0000466686,0.00007483766,0.000014020613,0.00031039037],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987541,0.000431034,0.00029090434,0.0002609441,0.000045276367,0.00021773655],"domain_scores_gemma":[0.9995259,0.0000932571,0.00004266955,0.00024455186,0.000060809718,0.000032791067],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055097434,0.00012999366,0.0002772318,0.0003453995,0.000019215557,0.0000061967226,0.00006969688,0.0002570588,0.000041200725],"category_scores_gemma":[0.0014648736,0.00010981792,0.000062851104,0.00069026905,0.000055915832,0.000025041372,0.00004543469,0.00026377666,0.00001248554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039005103,0.00008475372,0.018389696,0.0000572509,0.000015225705,0.00011483472,0.00008205124,0.000018409388,0.96721876,0.0029053201,0.0000813671,0.010993344],"study_design_scores_gemma":[0.0021556115,0.00020571149,0.01535139,0.00016130657,0.00007680927,0.00017238857,0.00011166685,0.001479011,0.9564843,0.013232123,0.010395499,0.00017414636],"about_ca_topic_score_codex":0.00003536048,"about_ca_topic_score_gemma":0.000011887917,"teacher_disagreement_score":0.024264203,"about_ca_system_score_codex":0.000109920366,"about_ca_system_score_gemma":0.000044111566,"threshold_uncertainty_score":0.44782448},"labels":[],"label_agreement":null},{"id":"W4408994336","doi":"10.1007/978-1-0716-4418-8","title":"Target Identification and Validation in Drug Discovery","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Università degli Studi di Parma; University of Waterloo; Universität Salzburg; Tel Aviv University; Cancer Research UK; Lahore University of Management Sciences; Centre National de la Recherche Scientifique; Cancer Research Institute; Chiesi Farmaceutici; Sanofi; Huntsman Cancer Institute","keywords":"Identification (biology); Drug; Computer science; Drug discovery; Computational biology; Pharmacology; Medicine; Biology; Bioinformatics","score_opus":0.017882489040207745,"score_gpt":0.38096111684849354,"score_spread":0.3630786278082858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4408994336","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015934142,0.0015547241,0.97971815,0.0004611162,0.0008058121,0.00042336626,0.000016482434,0.00003990339,0.01682109],"genre_scores_gemma":[0.00008600494,0.00009767033,0.95373976,0.00027188833,0.000034152366,0.00007599134,0.00018020003,0.00001805865,0.045496248],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99411124,0.0036427681,0.0007338824,0.0010689582,0.00015645938,0.00028668932],"domain_scores_gemma":[0.997392,0.0015272396,0.00027934657,0.0006963693,0.00006734028,0.000037710546],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0042556543,0.00030850215,0.0005497517,0.0010503667,0.000034835095,0.00015574938,0.0008766216,0.00035187014,0.0000038667595],"category_scores_gemma":[0.0007837085,0.00033736986,0.00009881057,0.0005217205,0.00012156055,0.0002868951,0.00078758335,0.0005087815,0.00000348148],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":"theoretical_or_conceptual","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012238065,0.000057385725,0.00025524365,0.00014256376,0.000040844872,0.000044474244,0.0002706162,0.005535131,0.012411121,0.90029573,0.000439564,0.08049506],"study_design_scores_gemma":[0.0002822736,0.00001910568,0.00059042417,0.00012253226,0.0000118092885,0.000006927586,0.0000050110525,0.020805312,0.013237548,0.9536867,0.010867001,0.00036537112],"about_ca_topic_score_codex":0.00004389756,"about_ca_topic_score_gemma":0.000013767507,"teacher_disagreement_score":0.08012969,"about_ca_system_score_codex":0.00028660218,"about_ca_system_score_gemma":0.00053910963,"threshold_uncertainty_score":0.99990785},"labels":[],"label_agreement":null},{"id":"W4409052081","doi":"10.1007/978-1-0716-4418-8_12","title":"Advancing Structural Biology and Protein-Ligand Interactions through Hydrogen/Deuterium Exchange Mass Spectrometry (HDX-MS)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Novelis (Canada); University of Waterloo","funders":"","keywords":"Hydrogen–deuterium exchange; Mass spectrometry; Chemistry; Deuterium; Ligand (biochemistry); Biophysics; Physics; Chromatography; Biochemistry; Biology; Atomic physics","score_opus":0.013131040425145036,"score_gpt":0.3918344021745846,"score_spread":0.3787033617494396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409052081","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.13610652,0.0014081786,0.83527625,0.00087877316,0.0001135883,0.00029508848,0.00003350447,0.00014403756,0.025744086],"genre_scores_gemma":[0.17044517,0.00014363069,0.828219,0.00024559232,0.0000697607,0.00031369773,0.000049720562,0.000023528011,0.0004898791],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981241,0.00027612966,0.00041199377,0.0006606551,0.000042698037,0.00048437982],"domain_scores_gemma":[0.9990366,0.00019463945,0.00013843118,0.0005376781,0.000038802064,0.000053866188],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00040086202,0.00027357307,0.00043945794,0.00029444852,0.00011227349,0.000024282606,0.000312049,0.00029486264,0.00068985036],"category_scores_gemma":[0.00022391952,0.00026505403,0.00009985407,0.00061879895,0.00020932943,0.00005267398,0.00027394862,0.00050393934,0.0000017600343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013120089,0.000021143198,0.0015350166,0.000075377124,0.000052445735,0.0000063267203,0.000028953324,0.0000011663078,0.9244334,0.06847467,0.00001796969,0.0053404225],"study_design_scores_gemma":[0.00023869742,0.00003971789,0.000055792963,0.000032461347,0.000020375835,0.000023004892,0.000040527728,0.00022027551,0.7566282,0.21884473,0.023661526,0.00019467778],"about_ca_topic_score_codex":0.00012886098,"about_ca_topic_score_gemma":0.000018900599,"teacher_disagreement_score":0.16780517,"about_ca_system_score_codex":0.0001353935,"about_ca_system_score_gemma":0.0000326405,"threshold_uncertainty_score":0.99998015},"labels":[],"label_agreement":null},{"id":"W4409240005","doi":"10.1007/978-1-0716-4378-5_10","title":"Identification of Rust Fungi Using High-Throughput Sequencing Data from Environmental Samples","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Canadian Food Inspection Agency; Agriculture and Agri-Food Canada; University of British Columbia","funders":"","keywords":"Identification (biology); Rust (programming language); Biology; Throughput; Computational biology; Computer science; Botany; Operating system","score_opus":0.05311870965273556,"score_gpt":0.39009651497767256,"score_spread":0.336977805324937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409240005","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.35027274,0.0055198837,0.6434823,0.000034477842,0.00023850499,0.00011540767,0.00027456152,0.000004420394,0.000057694455],"genre_scores_gemma":[0.54972154,0.00042563133,0.44893542,0.00013006138,0.00005320528,0.000008021283,0.0006689814,0.000013510102,0.00004363354],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99818677,0.0005048682,0.00043897322,0.00060276035,0.000054022177,0.00021258183],"domain_scores_gemma":[0.99886245,0.00006984975,0.00015325779,0.00087430933,0.000018785726,0.000021346328],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006702034,0.00016206212,0.00028072088,0.00009247998,0.000055589044,0.000008504808,0.00044178838,0.0002145412,0.000024787798],"category_scores_gemma":[0.00025211248,0.00015531627,0.000058495167,0.0001230335,0.00020301044,0.000003967211,0.00076407177,0.00009720368,0.0000017577202],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026601403,0.00003492225,0.0069530127,0.000012627766,0.00013835047,0.0000022304816,0.000026008953,0.00020470333,0.98625845,0.00081379194,0.000036284728,0.0054929894],"study_design_scores_gemma":[0.0003258285,0.00004269255,0.0028899047,0.000021682032,0.00006763534,0.0000021523645,0.00018431025,0.000906071,0.9901298,0.0027027635,0.0025594465,0.00016765714],"about_ca_topic_score_codex":0.00039733536,"about_ca_topic_score_gemma":0.000034034463,"teacher_disagreement_score":0.1994488,"about_ca_system_score_codex":0.000041884443,"about_ca_system_score_gemma":0.00006524637,"threshold_uncertainty_score":0.6333614},"labels":[],"label_agreement":null},{"id":"W4409255761","doi":"10.1007/978-1-0716-4378-5_9","title":"High Molecular Weight DNA Extraction from Wheat Rust Spores","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia","funders":"","keywords":"Spore; DNA extraction; Rust (programming language); Extraction (chemistry); Biology; Stripe rust; DNA; Botany; Genetics; Chemistry; Computer science; Gene; Polymerase chain reaction; Chromatography; Plant disease resistance; Programming language","score_opus":0.015398739284434495,"score_gpt":0.32866642027298754,"score_spread":0.31326768098855307,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409255761","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90141815,0.0022809845,0.09133172,0.0019031557,0.0008548708,0.00018501538,0.000035143832,0.000041872492,0.0019490685],"genre_scores_gemma":[0.57029384,0.0003955922,0.425938,0.0022880295,0.00023695122,0.000066713685,0.00038460424,0.0000036724123,0.00039257677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99780893,0.0009208872,0.0003253123,0.0005266794,0.00006256841,0.00035561956],"domain_scores_gemma":[0.9994109,0.00028959906,0.000065362125,0.00013731129,0.000041455525,0.000055349145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005365269,0.00020326607,0.0003442169,0.000056409244,0.00007983346,0.000025050429,0.00030236394,0.00039259746,0.00037726693],"category_scores_gemma":[0.00009391906,0.00009347143,0.0001273869,0.00040288662,0.00011512719,0.000020943378,0.000121652214,0.00022999664,0.000012647451],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028785405,0.000051339743,0.0024844627,0.0000026500577,0.000018165698,0.000044910154,0.000008981918,0.0000064466385,0.8642297,0.007849695,0.000075460724,0.12519944],"study_design_scores_gemma":[0.00024971546,0.0001550778,0.020777905,0.000018617773,0.000028230723,0.0000053894755,0.00003415041,0.00003613064,0.8618557,0.08045328,0.03615719,0.0002285951],"about_ca_topic_score_codex":0.00080715684,"about_ca_topic_score_gemma":0.00023930163,"teacher_disagreement_score":0.3346063,"about_ca_system_score_codex":0.000023496672,"about_ca_system_score_gemma":0.000012770961,"threshold_uncertainty_score":0.41308084},"labels":[],"label_agreement":null},{"id":"W4409255842","doi":"10.1007/978-1-0716-4378-5_18","title":"Development of a High-resolution Melt (HRM) Marker Diagnostic to the Wheat (Triticum aestivum L.) Leaf Rust Resistance Gene Lr34","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Rust (programming language); Stripe rust; Resistance (ecology); Biology; High Resolution Melt; Gene; Agronomy; Plant disease resistance; Genetics; Computer science; Genotype","score_opus":0.019913198131551183,"score_gpt":0.3105141708131449,"score_spread":0.29060097268159374,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409255842","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7387409,0.002341314,0.25243264,0.0048398715,0.00045110972,0.000429466,0.000026140897,0.000017570348,0.00072096754],"genre_scores_gemma":[0.4104579,0.00009440617,0.5880161,0.0008626845,0.00005875084,0.00012183876,0.00004229424,0.0000016765016,0.00034433109],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978852,0.000927919,0.00039103365,0.00037786996,0.0000745471,0.0003434089],"domain_scores_gemma":[0.9989788,0.0007051947,0.00006144108,0.00013386233,0.00007355077,0.000047172245],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001278344,0.00015552482,0.00029371266,0.00004669233,0.0001307903,0.000009751406,0.0003511494,0.00018948302,0.000044452212],"category_scores_gemma":[0.000620769,0.000063251515,0.0000672314,0.0005563298,0.00011853518,0.000008731373,0.00019614767,0.00013578357,0.0000055933283],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050439216,0.000054327018,0.0013149603,0.000009279147,0.000014614927,0.0000059690883,0.00005280215,0.000025824706,0.91593736,0.00363482,0.00015242684,0.078747176],"study_design_scores_gemma":[0.0003328589,0.00022733292,0.15495718,0.00008693637,0.000034782628,0.0000055202504,0.00011041313,0.000036164947,0.71631926,0.009082821,0.1184913,0.000315399],"about_ca_topic_score_codex":0.000090374466,"about_ca_topic_score_gemma":0.0014579504,"teacher_disagreement_score":0.33558348,"about_ca_system_score_codex":0.00003082683,"about_ca_system_score_gemma":0.000029765428,"threshold_uncertainty_score":0.2579322},"labels":[],"label_agreement":null},{"id":"W4409255906","doi":"10.1007/978-1-0716-4378-5_8","title":"Identifying Wheat Rusts Using MALDI-TOF Mass Spectrometry","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Identification and Susceptibility Testing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Canadian International Grains Institute; University of British Columbia; Agriculture and Agri-Food Canada; University of Manitoba","funders":"","keywords":"Mass spectrometry; MALDI imaging; Chromatography; Matrix-assisted laser desorption/ionization; Chemistry","score_opus":0.04023289418933291,"score_gpt":0.4265420816812362,"score_spread":0.3863091874919033,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409255906","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32482925,0.00071789854,0.67260796,0.00008554249,0.00054793,0.00015912461,0.0000042930646,0.000019180468,0.0010288345],"genre_scores_gemma":[0.19136001,0.000046442718,0.80757415,0.00042157058,0.000073858086,0.00001788344,0.00005611122,0.00002169547,0.00042828303],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972749,0.0010935052,0.00047692202,0.0006967257,0.000059253205,0.00039873316],"domain_scores_gemma":[0.9990602,0.00006072003,0.00010670033,0.0006321088,0.00008385594,0.000056379216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014566665,0.0002114508,0.00030124057,0.00031506398,0.00008524551,0.000052526957,0.0003545061,0.00035047779,0.00005572343],"category_scores_gemma":[0.0010060853,0.00023128363,0.00013722052,0.0005121193,0.00013029069,0.000004741145,0.0002370709,0.00020815387,0.000005069919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027858317,0.000035551853,0.011894386,0.00003244877,0.00004177224,0.000006097731,0.000014636413,0.000026980966,0.98291034,0.0020761546,0.000020984447,0.0029127973],"study_design_scores_gemma":[0.00044506293,0.000050954677,0.0033103547,0.00003494993,0.000025898242,0.000011714469,0.00007728783,0.00043247838,0.98490834,0.0085227955,0.0019297135,0.00025047504],"about_ca_topic_score_codex":0.00006538081,"about_ca_topic_score_gemma":0.000022019049,"teacher_disagreement_score":0.13496621,"about_ca_system_score_codex":0.00006599288,"about_ca_system_score_gemma":0.00009625815,"threshold_uncertainty_score":0.9431473},"labels":[],"label_agreement":null},{"id":"W4409255915","doi":"10.1007/978-1-0716-4378-5_15","title":"Identification and Genetic Analysis of Rust Resistance Genes in Wheat for Marker-Assisted Selection","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia","funders":"","keywords":"Rust (programming language); Selection (genetic algorithm); Identification (biology); Biology; Marker-assisted selection; Gene; Resistance (ecology); Genetics; Genetic marker; Computational biology; Botany; Computer science; Agronomy; Artificial intelligence","score_opus":0.020997209460379446,"score_gpt":0.3438627235158415,"score_spread":0.32286551405546204,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409255915","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8796326,0.0019880233,0.117654994,0.00038376843,0.000062989704,0.00018013598,0.000014974236,0.00000478849,0.00007774443],"genre_scores_gemma":[0.78317285,0.00038765668,0.21599875,0.00009895917,0.000013034435,0.00007803971,0.000056383695,8.3549037e-7,0.00019351619],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9987502,0.0005202261,0.00029416446,0.00027478187,0.000023076807,0.00013751363],"domain_scores_gemma":[0.9996044,0.00022125358,0.00006436,0.00004942697,0.000047665548,0.000012860794],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006051055,0.00007456754,0.00025165328,0.00013454001,0.000033322198,0.000008164898,0.0000896777,0.0001452645,0.000008611002],"category_scores_gemma":[0.00008995775,0.000038595852,0.000066385706,0.0010686811,0.00006183552,0.000006984888,0.000027367949,0.00004433552,6.327005e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000035821777,0.000024619589,0.049339168,0.000009933679,0.00003270856,5.820984e-7,0.000008202152,0.000018650395,0.8404884,0.0006562342,0.0000041758826,0.109381504],"study_design_scores_gemma":[0.00014658833,0.000073515526,0.78393686,0.00000866825,0.00010483414,7.442901e-7,0.000023992097,0.0010736453,0.20801818,0.0052636643,0.0012668523,0.00008248306],"about_ca_topic_score_codex":0.00008497061,"about_ca_topic_score_gemma":0.0030836512,"teacher_disagreement_score":0.7345977,"about_ca_system_score_codex":0.000012134965,"about_ca_system_score_gemma":0.0000067965575,"threshold_uncertainty_score":0.17207497},"labels":[],"label_agreement":null},{"id":"W4409255916","doi":"10.1007/978-1-0716-4378-5_16","title":"QTL/Linkage Mapping for Rust Resistance: Step-by-Step Guide","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia","funders":"","keywords":"Linkage (software); Quantitative trait locus; Rust (programming language); Resistance (ecology); Genetics; Family-based QTL mapping; Genetic linkage; Biology; Computer science; Gene mapping; Agronomy; Gene; Programming language; Chromosome","score_opus":0.025556342470940064,"score_gpt":0.3537476961175146,"score_spread":0.32819135364657454,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409255916","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027426783,0.00465558,0.9563607,0.002694862,0.00052088336,0.00045731198,0.00008164537,0.000038264076,0.0077639474],"genre_scores_gemma":[0.004211731,0.0002100556,0.98802257,0.0021409295,0.00010517002,0.0001310687,0.00015922959,0.0000022293889,0.0050170324],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9980566,0.00065975933,0.0003677633,0.00046322308,0.000042005035,0.0004106689],"domain_scores_gemma":[0.99923307,0.00048385322,0.00006816324,0.00011155887,0.000059245078,0.00004409106],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001278385,0.00016777313,0.0003245752,0.000040457275,0.00011762589,0.000021316371,0.00033153655,0.00031959545,0.000055568984],"category_scores_gemma":[0.0002416407,0.000077818564,0.00012993909,0.00037320837,0.00010634399,0.000010803414,0.00011024999,0.00014492276,0.0000026964526],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022042577,0.000028649225,0.00075692055,0.000014028559,0.000012840307,0.0000044280664,0.0000067405936,8.02165e-7,0.8846196,0.0058466424,0.007113233,0.10157407],"study_design_scores_gemma":[0.0002991627,0.00013097005,0.0012143542,0.00002578585,0.000011982927,0.0000015894834,0.00008844862,0.00006735324,0.08814927,0.0071119135,0.902706,0.00019313754],"about_ca_topic_score_codex":0.00006153818,"about_ca_topic_score_gemma":0.00022130241,"teacher_disagreement_score":0.8955928,"about_ca_system_score_codex":0.00002308163,"about_ca_system_score_gemma":0.000014742239,"threshold_uncertainty_score":0.3173349},"labels":[],"label_agreement":null},{"id":"W4409256032","doi":"10.1007/978-1-0716-4378-5_21","title":"Production of Doubled Haploid Spring Wheat Plants: Wheat × Maize Hybridization and Microspore Culture Methods","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Microspore; Doubled haploidy; Biology; Agronomy; Ploidy; Spring (device); Botany; Horticulture; Stamen; Pollen; Engineering; Gene; Genetics","score_opus":0.013058467355612316,"score_gpt":0.3571223582883,"score_spread":0.3440638909326877,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256032","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2134196,0.01296187,0.77197814,0.00029191453,0.00053597963,0.00033890607,0.000009539233,0.000015125541,0.0004488892],"genre_scores_gemma":[0.03740407,0.0020622304,0.9583512,0.0002353624,0.00011452075,0.000044163542,0.00031949178,0.000019980907,0.0014489839],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980898,0.00077137246,0.00034877143,0.0005376127,0.00004227358,0.00021017126],"domain_scores_gemma":[0.9994329,0.000022396185,0.000111114794,0.00030793817,0.00009092912,0.00003472359],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007973538,0.00019881963,0.00031642558,0.00013376135,0.00006417348,0.00001306021,0.000141613,0.00037111275,0.00000311398],"category_scores_gemma":[0.0003051679,0.00016898314,0.00006443547,0.0001896461,0.00013190381,0.0000059454696,0.00011295149,0.0001419658,3.3990747e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000093868555,0.000035661553,0.0023043875,0.0000604335,0.000066649925,0.0000027837484,0.00007661935,0.00007905493,0.9834104,0.00090919307,0.0002991605,0.012661749],"study_design_scores_gemma":[0.00046004672,0.000088461115,0.00041430458,0.000050656305,0.00003376052,0.000032952943,0.000053728076,0.000064667394,0.9626885,0.0006862421,0.035265822,0.0001608313],"about_ca_topic_score_codex":0.000108503365,"about_ca_topic_score_gemma":0.00013538983,"teacher_disagreement_score":0.18637303,"about_ca_system_score_codex":0.00002141429,"about_ca_system_score_gemma":0.00005193976,"threshold_uncertainty_score":0.68909323},"labels":[],"label_agreement":null},{"id":"W4409256084","doi":"10.1007/978-1-0716-4378-5_1","title":"Race Characterization of Puccinia triticina, the Causal Agent of Wheat Leaf Rust, in Canada","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"Agriculture Food and Rural Development; Agriculture and Agri-Food Canada; Grain Research Centre","funders":"","keywords":"Race (biology); Rust (programming language); Wheat leaf rust; Puccinia striiformis; Biology; Botany; Computer science; Cultivar; Genetics; Gene","score_opus":0.018194526495257716,"score_gpt":0.30783055212225724,"score_spread":0.2896360256269995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256084","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9925581,0.0004179127,0.0049707694,0.0014524685,0.00018518859,0.00015635275,0.000022171605,0.000001749457,0.0002352916],"genre_scores_gemma":[0.993728,0.00013901734,0.005625831,0.0003813645,0.000015866735,0.00001363721,0.00003517124,5.8868466e-7,0.00006054038],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984823,0.00083540473,0.00031230287,0.00016343223,0.0000404159,0.00016615461],"domain_scores_gemma":[0.9995763,0.00023610455,0.00006838076,0.00006921986,0.00003491691,0.000015119982],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00060415635,0.000079015546,0.00025476277,0.000026255384,0.000020774756,0.0000023223745,0.00018421221,0.00009348132,0.000038342692],"category_scores_gemma":[0.000090199916,0.0000310722,0.0000372889,0.00036417705,0.00006738864,0.0000056695526,0.000061833794,0.00009646189,1.4301379e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000023195418,0.000022324353,0.023538154,0.0000077465265,0.000004721098,0.0000043729224,0.000022085142,0.000006953955,0.92437035,0.000985888,0.000006158189,0.05100805],"study_design_scores_gemma":[0.00019369273,0.00017106232,0.30806315,0.0000234299,0.000010012017,0.000002316819,0.000105102605,0.00009726963,0.68626624,0.0013891332,0.0035989324,0.00007963323],"about_ca_topic_score_codex":0.13753672,"about_ca_topic_score_gemma":0.29519656,"teacher_disagreement_score":0.284525,"about_ca_system_score_codex":0.000028231201,"about_ca_system_score_gemma":0.00006716786,"threshold_uncertainty_score":0.8682065},"labels":[],"label_agreement":null},{"id":"W4409256093","doi":"10.1007/978-1-0716-4378-5_7","title":"Microscopic Analyses of Rust Species: Preparation of Samples and Slides","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Yeasts and Rust Fungi Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Rust (programming language); Materials science; Biology; Computer science","score_opus":0.04374301545695097,"score_gpt":0.44968847913833476,"score_spread":0.4059454636813838,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256093","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5356758,0.010325426,0.45248705,0.000059779886,0.000084818676,0.0001309669,0.000017833618,0.0000027143938,0.0012155832],"genre_scores_gemma":[0.54430944,0.0010551084,0.45423946,0.00008594767,0.000016359232,0.000013090854,0.000030816274,0.000006339026,0.0002434784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990171,0.00030191534,0.00029178313,0.00024414205,0.00002587991,0.00011913548],"domain_scores_gemma":[0.9995461,0.00006591828,0.0000983151,0.00021345905,0.000063189254,0.0000130230965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034022884,0.000103480445,0.0002895725,0.00012052742,0.000020995807,0.0000030605036,0.00009982253,0.00013165775,0.000008536105],"category_scores_gemma":[0.00037645642,0.00008685584,0.00006220199,0.00015009912,0.00024854214,9.965568e-7,0.00015077431,0.00004242452,9.864873e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004794232,0.000029576051,0.01968256,0.000058469417,0.00010904193,3.7750604e-7,0.000037178546,0.000027207981,0.9750991,0.002365285,0.000043620625,0.0024996782],"study_design_scores_gemma":[0.00024144429,0.00017552797,0.0076606534,0.000026304913,0.000033468954,9.918666e-7,0.00010222165,0.000012073905,0.98613614,0.0011343868,0.004406397,0.00007041857],"about_ca_topic_score_codex":0.00007132335,"about_ca_topic_score_gemma":0.00003021268,"teacher_disagreement_score":0.012021908,"about_ca_system_score_codex":0.000004798379,"about_ca_system_score_gemma":0.00003572943,"threshold_uncertainty_score":0.35418785},"labels":[],"label_agreement":null},{"id":"W4409256125","doi":"10.1007/978-1-0716-4378-5_3","title":"Stripe Rust Virulence and Host Reaction Assessment Protocols: From Lab to Field","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Virulence; Host (biology); Rust (programming language); Field (mathematics); Biology; Computer science; Genetics; Mathematics; Gene; Programming language","score_opus":0.029254936364451797,"score_gpt":0.4065969524976102,"score_spread":0.3773420161331584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256125","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8883674,0.00026916055,0.10278688,0.0040045027,0.0002458001,0.0022101533,0.000027840051,0.000025013635,0.0020632574],"genre_scores_gemma":[0.23352243,0.0001327898,0.7577663,0.0059673646,0.00014583439,0.0021865324,0.000052957657,0.0000019252618,0.00022386119],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99874425,0.00053044147,0.00017580269,0.00033482455,0.000033663084,0.00018103982],"domain_scores_gemma":[0.99951625,0.00031149902,0.000032335014,0.00007336373,0.000025300293,0.000041241892],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004979209,0.00010038653,0.0001823858,0.00002743667,0.00005462836,0.000020771426,0.00014876861,0.00018319166,0.000051856012],"category_scores_gemma":[0.00012994728,0.0000457045,0.000030936404,0.00024053741,0.00003512473,0.000011572781,0.00012699205,0.00014132856,0.0000019463978],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017896808,0.000022453789,0.0069358936,0.0000019795675,0.0000042062584,0.0000035428795,0.000009400938,3.075577e-7,0.77485675,0.001136053,0.000024445868,0.21698707],"study_design_scores_gemma":[0.00028099483,0.00097418507,0.16917041,0.000054640237,0.000013195242,0.000002794733,0.00010821869,0.00005536458,0.73999864,0.01903067,0.07006854,0.00024237028],"about_ca_topic_score_codex":0.00051447155,"about_ca_topic_score_gemma":0.00027184837,"teacher_disagreement_score":0.6549794,"about_ca_system_score_codex":0.0000129989585,"about_ca_system_score_gemma":0.000010379304,"threshold_uncertainty_score":0.18637754},"labels":[],"label_agreement":null},{"id":"W4409256149","doi":"10.1007/978-1-0716-4378-5_22","title":"In Vitro and in Planta Fungicide Testing for Management of Wheat Rusts","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; Terramera (Canada); University of British Columbia; Agriculture and Agri-Food Canada","funders":"","keywords":"Fungicide; Biology; Agronomy; Horticulture","score_opus":0.027989013976931792,"score_gpt":0.3372267445077274,"score_spread":0.3092377305307956,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256149","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9884262,0.0014263527,0.008647419,0.00027372007,0.00006106829,0.0002683368,0.000039516483,0.000004622963,0.0008527695],"genre_scores_gemma":[0.3895098,0.000115480994,0.60991603,0.00026891337,0.00000907083,0.00005647889,0.000023929952,6.9129743e-7,0.00009962353],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991632,0.00022972083,0.00020105207,0.00021132681,0.000019799996,0.00017491788],"domain_scores_gemma":[0.9994681,0.00044406185,0.00003466827,0.00003241922,0.000008745805,0.000012011958],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00067216175,0.00007004899,0.00019454843,0.000043042815,0.000014832431,0.0000034205752,0.00010084342,0.000083727515,0.0000020250368],"category_scores_gemma":[0.000075025295,0.000031285846,0.00002194496,0.00032621663,0.000034186054,0.000009013112,0.00006558447,0.000057058267,7.339535e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007950638,0.000022315202,0.010435298,0.000034562614,0.000004359305,0.000026439982,0.000003632697,0.0000069313783,0.9376384,0.001000643,0.000002733889,0.050745178],"study_design_scores_gemma":[0.00062817417,0.00012531887,0.21705164,0.00023452389,0.000011790992,0.000007130474,0.00014264818,0.0006297902,0.76163375,0.017113768,0.002229475,0.00019199515],"about_ca_topic_score_codex":0.00006952559,"about_ca_topic_score_gemma":0.00019049425,"teacher_disagreement_score":0.6012686,"about_ca_system_score_codex":0.000012393344,"about_ca_system_score_gemma":0.0000025871843,"threshold_uncertainty_score":0.12757999},"labels":[],"label_agreement":null},{"id":"W4409256156","doi":"10.1007/978-1-0716-4378-5_14","title":"Field Phenotyping of Wheat Stripe Rust and Leaf Tip Necrosis Associated with Rust Resistance Genes","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wheat and Barley Genetics and Pathology","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta; University of British Columbia","funders":"","keywords":"Stripe rust; Rust (programming language); Biology; Resistance (ecology); Gene; Botany; Agronomy; Plant disease resistance; Genetics; Computer science","score_opus":0.018908344286142263,"score_gpt":0.3098247402154114,"score_spread":0.29091639592926916,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256156","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96536964,0.00463801,0.02641767,0.0013051151,0.00011918218,0.00016522147,0.000019559628,0.000016335252,0.0019492857],"genre_scores_gemma":[0.789586,0.00067369646,0.20730051,0.0013305893,0.0000471723,0.000034102737,0.00005735191,0.0000027962851,0.0009677574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99872464,0.0005108122,0.00021327058,0.00028288178,0.000037365822,0.00023100038],"domain_scores_gemma":[0.99931175,0.00047407535,0.00006772404,0.00006956739,0.000049401497,0.000027496708],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00055483426,0.00011829639,0.00028673888,0.000031726704,0.00007282483,0.000011770754,0.00014522311,0.00021784916,0.000032334807],"category_scores_gemma":[0.00019288123,0.00005187819,0.00004185089,0.00035568647,0.00013021108,0.000010489148,0.00007569592,0.000116996074,1.8516519e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062169864,0.000026928883,0.015853543,0.00000840627,0.000018672896,0.000003813577,0.000020966087,0.0000016913019,0.8670076,0.0014169054,0.000030356088,0.11554891],"study_design_scores_gemma":[0.000618539,0.0007333098,0.042834293,0.00015922799,0.00006010137,0.0000032904088,0.00017840181,0.00009115826,0.9290881,0.013635424,0.012245445,0.00035269355],"about_ca_topic_score_codex":0.00013795253,"about_ca_topic_score_gemma":0.00087965897,"teacher_disagreement_score":0.18088286,"about_ca_system_score_codex":0.0000089278265,"about_ca_system_score_gemma":0.0000108900285,"threshold_uncertainty_score":0.21155311},"labels":[],"label_agreement":null},{"id":"W4409256306","doi":"10.1007/978-1-0716-4378-5_20","title":"A Protocol for High-efficiency Transformation and Genome Editing in Elite Wheat Cultivars","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Elite; Transformation (genetics); Protocol (science); Cultivar; Biology; Genome; Computer science; Horticulture; Genetics; Political science; Gene; Medicine","score_opus":0.013457261853983426,"score_gpt":0.4391677847487099,"score_spread":0.42571052289472644,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409256306","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.023759468,0.0002145085,0.9580768,0.000115856936,0.00007471253,0.01739602,0.000006573008,0.000008165504,0.0003479399],"genre_scores_gemma":[0.049700815,0.000031566782,0.86592615,0.0004304583,0.00008223828,0.0836705,0.00007350321,0.000027276365,0.000057486715],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988762,0.0001994792,0.00030526015,0.00032839147,0.000026994081,0.00026364045],"domain_scores_gemma":[0.99971294,0.000037496455,0.000033615444,0.00015977131,0.000030445644,0.000025756823],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074317766,0.00014037028,0.00018587912,0.00017124397,0.000029190225,0.000010176589,0.00010969967,0.00020042455,0.0000020494404],"category_scores_gemma":[0.00020586631,0.00013750145,0.000043852575,0.0001759482,0.000050509712,0.0000023725204,0.000054482134,0.00009581582,1.4468793e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049986986,0.000027608801,0.0004065247,0.00010277766,0.000009620397,8.6189914e-7,0.00007918788,0.0006942288,0.97643876,0.0017240533,0.000002851809,0.020463554],"study_design_scores_gemma":[0.0027660942,0.00024281756,0.0030548954,0.000072753115,0.000010193242,0.00000551,0.00010768464,0.0024232108,0.9619691,0.0039527733,0.025132595,0.00026239446],"about_ca_topic_score_codex":0.000019284576,"about_ca_topic_score_gemma":0.000019759013,"teacher_disagreement_score":0.09215059,"about_ca_system_score_codex":0.000018494677,"about_ca_system_score_gemma":0.00003062753,"threshold_uncertainty_score":0.56071466},"labels":[],"label_agreement":null},{"id":"W4409265970","doi":"10.1007/978-1-0716-4108-8_26","title":"Correction to: Protein Kinase R (PKR) as a Novel dsRNA Sensor in Antiviral Innate Immunity","year":2025,"lang":"en","type":"erratum","venue":"Methods in molecular biology","topic":"RNA regulation and disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Protein kinase R; Innate immune system; RNA silencing; Virology; Biology; Immunology; Kinase; Protein kinase A; RNA interference; Immune system; Cell biology; Mitogen-activated protein kinase kinase; Gene; RNA; Genetics","score_opus":0.014143222842466985,"score_gpt":0.3675017014604489,"score_spread":0.3533584786179819,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409265970","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.089551814,0.004554731,0.8036842,0.001216429,0.03247008,0.0042357952,0.00028970756,0.00011054336,0.063886724],"genre_scores_gemma":[0.029365776,0.00056421646,0.56811404,0.006841501,0.0012806513,0.0014859189,0.0067117754,0.00031651437,0.38531962],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99534607,0.0021712242,0.00068422983,0.0010685059,0.00013376592,0.00059619616],"domain_scores_gemma":[0.99848133,0.000058912578,0.00023714556,0.00094170595,0.00014259056,0.00013831268],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0012519695,0.0005441959,0.00068315177,0.0007339353,0.00006525046,0.00003576094,0.0005097096,0.0013041582,0.000029042218],"category_scores_gemma":[0.003498496,0.00058060954,0.00027019487,0.00075850275,0.00015698429,0.0000040007876,0.00052080373,0.0010190968,0.000012999338],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00040613482,0.0002570968,0.00038641226,0.00008348502,0.000062925516,0.00005667741,0.000027609003,0.00008088482,0.9691339,0.00029655412,0.015130697,0.014077585],"study_design_scores_gemma":[0.00289723,0.0008127643,0.004079081,0.0006567121,0.00007234908,0.000030129397,0.00011012199,0.00097429217,0.5057346,0.0017446093,0.4813114,0.0015766717],"about_ca_topic_score_codex":0.00070257374,"about_ca_topic_score_gemma":0.00031547502,"teacher_disagreement_score":0.4661807,"about_ca_system_score_codex":0.0001238267,"about_ca_system_score_gemma":0.0006903051,"threshold_uncertainty_score":0.9999924},"labels":[],"label_agreement":null},{"id":"W4409334618","doi":"10.1007/978-1-0716-4510-9_3","title":"Initiating Separate Cultures of Keratinocytes and Melanocytes from a Single Biopsy","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Wound Healing and Treatments","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier de l'Université Laval","funders":"","keywords":"Biopsy; Cell biology; Pathology; Biology; Medicine","score_opus":0.035978685870464495,"score_gpt":0.45432867331033194,"score_spread":0.41834998743986745,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409334618","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8457251,0.007771456,0.14223462,0.00038045802,0.00010438061,0.0001821578,0.0000136832305,0.00002390535,0.0035641943],"genre_scores_gemma":[0.29192385,0.000050450544,0.70754164,0.00036036898,0.000011916731,0.000013882374,0.00003365187,0.000005600967,0.000058606245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989273,0.00041943192,0.0002529864,0.00022995584,0.000030927262,0.00013937577],"domain_scores_gemma":[0.9993875,0.000327267,0.00006439641,0.00015226388,0.000039657676,0.000028882965],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027634387,0.00010885983,0.00035801815,0.0001237443,0.000028564335,0.0000062150893,0.00003912454,0.00013946931,0.000010287431],"category_scores_gemma":[0.00044339726,0.00008461217,0.000041799674,0.000163159,0.00009980153,0.000008678574,0.000046151446,0.00010896998,7.0423374e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007122783,0.00010079752,0.07778086,0.00004333622,0.00015090387,0.000036884423,0.00025010848,0.0000029334767,0.90451986,0.0018714904,0.000007076882,0.01516451],"study_design_scores_gemma":[0.0016099719,0.00027656285,0.0131354695,0.0002020299,0.00012622023,0.000017145023,0.00016138497,0.00028210325,0.9637951,0.0198453,0.000454394,0.000094284085],"about_ca_topic_score_codex":0.00032994786,"about_ca_topic_score_gemma":0.000011218101,"teacher_disagreement_score":0.565307,"about_ca_system_score_codex":0.000024146373,"about_ca_system_score_gemma":0.000038093942,"threshold_uncertainty_score":0.3450384},"labels":[],"label_agreement":null},{"id":"W4409335111","doi":"10.1007/978-1-0716-4510-9_7","title":"Isolation and Culture of Human Dermal Microvascular Endothelial Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval","funders":"","keywords":"Isolation (microbiology); Medicine; Biology; Microbiology","score_opus":0.01086617049794527,"score_gpt":0.36378940909850477,"score_spread":0.3529232386005595,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409335111","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24169354,0.0060224207,0.751073,0.000041297117,0.00014597748,0.00014888916,0.00001175299,0.0000046335867,0.00085846346],"genre_scores_gemma":[0.34859535,0.0006104485,0.6494678,0.0005990332,0.000076798984,0.000035519937,0.00006835047,0.000020412745,0.00052628573],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99878323,0.0004177266,0.00025168716,0.00033882118,0.00003166183,0.00017684787],"domain_scores_gemma":[0.99958205,0.000015975158,0.000071390095,0.00025442746,0.000051814906,0.000024356852],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000431175,0.00013650584,0.00022656129,0.00009163486,0.000037321333,0.000005489126,0.00013824116,0.0002875518,0.000009015366],"category_scores_gemma":[0.0000540044,0.00012638573,0.00011901921,0.000119740456,0.00015231513,0.0000014209548,0.000130099,0.00007596407,3.371542e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026158035,0.000026414731,0.004337966,0.000025952464,0.000067727815,0.0000013907032,0.000041353698,0.000016112654,0.9888447,0.0012253344,0.00009388253,0.005293032],"study_design_scores_gemma":[0.0005124619,0.0001335471,0.0005181122,0.000013898768,0.000027348138,0.0000031570507,0.000031704767,0.00003123255,0.98408043,0.0016775478,0.01285274,0.000117787466],"about_ca_topic_score_codex":0.000038419203,"about_ca_topic_score_gemma":0.00001214845,"teacher_disagreement_score":0.10690181,"about_ca_system_score_codex":0.000009606483,"about_ca_system_score_gemma":0.000035472323,"threshold_uncertainty_score":0.51538604},"labels":[],"label_agreement":null},{"id":"W4409404594","doi":"10.1007/7651_2025_625","title":"Multiplex PCR for the Rapid Diagnosis of Myeloproliferative Neoplasms","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Myeloproliferative Neoplasms: Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Kingston Health Sciences Centre; Queen's University","funders":"","keywords":"Multiplex; Multiplex polymerase chain reaction; Myeloproliferative Disorders; Medicine; Pathology; Biology; Polymerase chain reaction; Genetics; Gene","score_opus":0.035138011327321486,"score_gpt":0.42360521834836184,"score_spread":0.3884672070210404,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409404594","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05254674,0.009988357,0.923256,0.008544432,0.0005158136,0.0034282552,0.000060137492,0.000032861266,0.00162745],"genre_scores_gemma":[0.15344982,0.0014693562,0.8374575,0.0029017767,0.00005098252,0.0043832706,0.00005130719,0.000026890879,0.00020909769],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99791706,0.0007281481,0.0005110732,0.00044153025,0.000080030695,0.00032214043],"domain_scores_gemma":[0.9952304,0.0039196066,0.00012717454,0.00044460795,0.0002267101,0.00005152846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010286013,0.0002448006,0.00069831824,0.00023033064,0.000083543746,0.0000082248935,0.00016580151,0.00021294584,0.0000961934],"category_scores_gemma":[0.0023851977,0.00015359218,0.00022726836,0.00046561728,0.00024823518,0.0000148937925,0.000088966124,0.00020066144,0.0000020994325],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010823552,0.001140918,0.36155972,0.00024899543,0.0016846239,0.00003562223,0.0007066826,0.00013609482,0.13720347,0.09264639,0.000933367,0.40262178],"study_design_scores_gemma":[0.00439169,0.0010377263,0.03140998,0.00014123433,0.00033370574,0.000009754044,0.00017781931,0.0017778623,0.9311129,0.0067445845,0.022682805,0.00017995984],"about_ca_topic_score_codex":0.00006696559,"about_ca_topic_score_gemma":0.000039669227,"teacher_disagreement_score":0.79390943,"about_ca_system_score_codex":0.00007310486,"about_ca_system_score_gemma":0.00016965682,"threshold_uncertainty_score":0.62633073},"labels":[],"label_agreement":null},{"id":"W4409623480","doi":"10.1007/978-1-0716-4486-7_3","title":"A Method for H2A.Z/H2B Dimer Exchange Within Nucleosomes In Vitro","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA and Nucleic Acid Chemistry","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"In vitro; Dimer; Chemistry; Nucleosome; Cell biology; Biophysics; Biology; Biochemistry; Histone; Organic chemistry; DNA","score_opus":0.012171289984883359,"score_gpt":0.3907563989527396,"score_spread":0.37858510896785624,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409623480","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10472546,0.003010198,0.8883831,0.00035080366,0.00031973008,0.00043044967,0.00002749376,0.000019922034,0.0027328392],"genre_scores_gemma":[0.016948352,0.00009251472,0.97936225,0.0018482322,0.0000737396,0.00029917352,0.00014489282,0.00004069987,0.0011901689],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975335,0.0006872051,0.00046733304,0.00076093717,0.000052966112,0.00049803505],"domain_scores_gemma":[0.9990617,0.00018051329,0.00011060261,0.0005287611,0.000056702633,0.0000617119],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015914398,0.0002850667,0.0004543137,0.00020893285,0.000040761675,0.000013813649,0.00041988198,0.00058706076,0.000011686877],"category_scores_gemma":[0.0008333638,0.0002826383,0.0001829242,0.00033359646,0.00013471271,0.0000027772307,0.00028191542,0.00023547007,0.0000015258881],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018741154,0.00008206608,0.00061192457,0.00007244435,0.000066839326,0.0000074078944,0.00006451496,0.000021170761,0.97234374,0.00085656793,0.00024471284,0.025441198],"study_design_scores_gemma":[0.0012391802,0.000098636876,0.00009705178,0.000021236821,0.000023900337,0.000006983946,0.00008659784,0.0005012907,0.93308747,0.006520159,0.05811407,0.00020343413],"about_ca_topic_score_codex":0.00003952435,"about_ca_topic_score_gemma":0.000022106466,"teacher_disagreement_score":0.09097912,"about_ca_system_score_codex":0.00003805024,"about_ca_system_score_gemma":0.00009342415,"threshold_uncertainty_score":0.99996257},"labels":[],"label_agreement":null},{"id":"W4409623505","doi":"10.1007/978-1-0716-4486-7_9","title":"Genome-Wide Nucleosome Mapping by H3Q85C-Directed Chemical Cleavage in Saccharomyces cerevisiae","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université de Montréal; Montreal Clinical Research Institute","funders":"","keywords":"Saccharomyces cerevisiae; Nucleosome; Cleavage (geology); Genetics; Genome; Computational biology; Biology; DNA; Yeast; Histone; Gene","score_opus":0.011879538771727637,"score_gpt":0.32347356874762956,"score_spread":0.3115940299759019,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409623505","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44690832,0.0071976096,0.54041576,0.00060301606,0.0002574216,0.00060488575,0.000019970117,0.0000559876,0.0039369822],"genre_scores_gemma":[0.36333585,0.0006910876,0.63295263,0.001988417,0.00007127519,0.00023534527,0.0001985118,0.00006500894,0.0004618893],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964754,0.0014523416,0.0005751295,0.0008502886,0.00007415544,0.0005727006],"domain_scores_gemma":[0.99904376,0.00014618984,0.00011934616,0.0005794613,0.00003730362,0.00007391199],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013069655,0.00032485867,0.0005232412,0.0002784265,0.00004252669,0.000023550301,0.0005611373,0.0006238907,0.00005952271],"category_scores_gemma":[0.00093494804,0.00033388755,0.0001513168,0.0005072984,0.00013284125,0.0000040251048,0.00032493082,0.0002747679,0.000007857657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000062696075,0.0000696902,0.0032477477,0.000035628815,0.000053945394,0.0000143983725,0.000027558386,0.000003528893,0.9800083,0.00053101,0.00012350702,0.01582199],"study_design_scores_gemma":[0.0006114078,0.000088898756,0.0009972122,0.000049539125,0.000010813108,0.000004825691,0.000046573103,0.000030011584,0.96200496,0.0053849556,0.030438539,0.0003322392],"about_ca_topic_score_codex":0.000041512318,"about_ca_topic_score_gemma":0.000008084173,"teacher_disagreement_score":0.09253684,"about_ca_system_score_codex":0.000052250245,"about_ca_system_score_gemma":0.00006904465,"threshold_uncertainty_score":0.9999113},"labels":[],"label_agreement":null},{"id":"W4409623546","doi":"10.1007/978-1-0716-4486-7_11","title":"Chromatin Immunoprecipitation Assays of Histone Modifications in Daphnia magna","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin immunoprecipitation; Immunoprecipitation; Daphnia magna; Histone; Chromatin; Cell biology; Chemistry; Biology; Genetics; Gene; Gene expression","score_opus":0.011316556690274789,"score_gpt":0.3890058189089002,"score_spread":0.37768926221862537,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409623546","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4186974,0.0013142693,0.57626593,0.00011551424,0.00013258186,0.00019271359,0.000012444395,0.00000476834,0.0032643725],"genre_scores_gemma":[0.46407476,0.00013694575,0.53526586,0.00010250092,0.000007987053,0.00006763819,0.00014015919,0.000013002763,0.00019116006],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982632,0.00061754725,0.00051422336,0.0003531196,0.000039795457,0.00021216096],"domain_scores_gemma":[0.99922526,0.000059579932,0.0001412288,0.00048756038,0.000065877044,0.000020492344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008864621,0.0001451849,0.0002657327,0.0002642145,0.000023207165,0.000005489383,0.00029353442,0.0002714162,0.000009093435],"category_scores_gemma":[0.00038513963,0.00016070664,0.000079618454,0.00033760382,0.0001313419,0.0000018454483,0.00014119224,0.00012882882,0.0000012325695],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002242612,0.000092510556,0.0018810724,0.000027846723,0.000024792504,0.0000011735742,0.00005458817,0.00074505014,0.97752655,0.010345876,0.000023923694,0.009254224],"study_design_scores_gemma":[0.0011782254,0.00020032216,0.01972355,0.000049134258,0.000023531768,0.0000046130694,0.0001348234,0.005902163,0.94210154,0.028314976,0.0020709534,0.0002961423],"about_ca_topic_score_codex":0.00009279649,"about_ca_topic_score_gemma":0.00008211496,"teacher_disagreement_score":0.045377366,"about_ca_system_score_codex":0.000054605967,"about_ca_system_score_gemma":0.00010344763,"threshold_uncertainty_score":0.65534264},"labels":[],"label_agreement":null},{"id":"W4409647171","doi":"10.1007/978-1-0716-4486-7_15","title":"Anchor-Away: Efficient, Conditional Depletion of Nuclear Proteins in Saccharomyces cerevisiae","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Saccharomyces cerevisiae; Chemistry; Computational biology; Computer science; Cell biology; Biology; Biochemistry; Yeast","score_opus":0.01478195325654567,"score_gpt":0.3542528544074871,"score_spread":0.3394709011509414,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409647171","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.55453503,0.0019416643,0.43942377,0.00025427403,0.00014051076,0.0006375075,0.000043405795,0.000013200366,0.0030106215],"genre_scores_gemma":[0.73398083,0.00007759282,0.26514575,0.00045922605,0.000033895354,0.00010442574,0.00013462189,0.000018556462,0.000045119144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978059,0.0009877144,0.000410382,0.0004531849,0.000062594416,0.00028024445],"domain_scores_gemma":[0.99940926,0.000050548857,0.00011664175,0.0003290465,0.00006042194,0.000034085115],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010282741,0.00016994077,0.00030431416,0.00025717966,0.00003059278,0.000007228473,0.00025139417,0.00032160457,0.000054627366],"category_scores_gemma":[0.00044402975,0.00017275826,0.0001056678,0.0003343934,0.00017723315,0.0000017909515,0.00016677214,0.00018338197,0.0000032381613],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000854644,0.00010861482,0.0046617533,0.0000593966,0.000028169856,0.0000050908325,0.000026582866,0.00016056323,0.9752822,0.01484513,0.000034214827,0.004702835],"study_design_scores_gemma":[0.00093503186,0.00024663215,0.004207395,0.00007331181,0.000009162278,0.0000068089053,0.00004694788,0.0003240957,0.97601753,0.007821084,0.010112425,0.00019958861],"about_ca_topic_score_codex":0.00003855024,"about_ca_topic_score_gemma":0.0000157802,"teacher_disagreement_score":0.17944576,"about_ca_system_score_codex":0.000027082544,"about_ca_system_score_gemma":0.00008787994,"threshold_uncertainty_score":0.70448774},"labels":[],"label_agreement":null},{"id":"W4409647231","doi":"10.1007/978-1-0716-4486-7_8","title":"Psoralen Crosslinking–Chromatin Endogenous Cleavage Assay to Examine Histone DNA Interactions of Active and Inactive rRNA Genes","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Chromatin; Histone; Endogeny; Psoralen; DNA; Chemistry; Cleavage (geology); Gene; Molecular biology; Biology; Biochemistry","score_opus":0.017855325657000373,"score_gpt":0.3754153730590782,"score_spread":0.3575600474020778,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409647231","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65218693,0.00076375174,0.34470528,0.00010848968,0.00018864688,0.0002765952,0.00004049157,0.0000075295447,0.0017222955],"genre_scores_gemma":[0.6510713,0.00015424244,0.34806436,0.00029825006,0.000028393144,0.000065484244,0.000074961274,0.000024370185,0.00021865116],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801964,0.0006836973,0.00042393524,0.0005300922,0.000049189493,0.0002934565],"domain_scores_gemma":[0.99910283,0.00012858183,0.00017146481,0.0004360735,0.0000989629,0.00006209524],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057849125,0.00023204954,0.00040472706,0.00024401746,0.00006741562,0.000013008286,0.00026851534,0.00024352124,0.000008407292],"category_scores_gemma":[0.00045108705,0.00024304294,0.00009097769,0.00024769772,0.00020046084,0.000003555703,0.0004048838,0.0001720046,0.0000011039822],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000097060314,0.00009286329,0.0007911961,0.000033346496,0.00011629034,0.00000677674,0.00024891307,0.000053311265,0.94390255,0.0007240358,0.000021207867,0.05391243],"study_design_scores_gemma":[0.0005258778,0.00032461624,0.0024629387,0.00003016481,0.000034997312,0.000024942625,0.00023805395,0.0002574881,0.990302,0.0018821001,0.0036989618,0.0002178203],"about_ca_topic_score_codex":0.00013202535,"about_ca_topic_score_gemma":0.00014678465,"teacher_disagreement_score":0.05369461,"about_ca_system_score_codex":0.000079358135,"about_ca_system_score_gemma":0.000090075875,"threshold_uncertainty_score":0.9911004},"labels":[],"label_agreement":null},{"id":"W4409647243","doi":"10.1007/978-1-0716-4486-7_5","title":"Detection of γ-H2A.X for Rapid Assessment of Genotoxic Agent-induced Double-strand DNA Breaks by Immunofluorescence","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Sherbrooke","funders":"","keywords":"Double strand; DNA; Immunofluorescence; Indirect immunofluorescence; Molecular biology; Biology; Chemistry; DNA damage; Genetics; Antibody","score_opus":0.016971221290459425,"score_gpt":0.3827746566033527,"score_spread":0.3658034353128933,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409647243","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3573803,0.0009110337,0.64064497,0.000022465001,0.00027452232,0.0005286408,0.000025794618,0.0000073264373,0.00020494431],"genre_scores_gemma":[0.6509259,0.00011055331,0.3485423,0.0000791413,0.000013526275,0.00017148415,0.00007528453,0.000020145251,0.00006165979],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979243,0.00059730205,0.0005735044,0.0005194301,0.00007609066,0.0003093249],"domain_scores_gemma":[0.9989713,0.00006832767,0.0002327037,0.0005570807,0.00013329397,0.000037310303],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013599121,0.00021444874,0.0004265125,0.00017142783,0.00003380039,0.0000054315346,0.0003486206,0.0004353635,0.000007349264],"category_scores_gemma":[0.00014918546,0.00021844335,0.00021461432,0.00023664515,0.000116699506,0.000002666364,0.0001472676,0.00013008872,1.4968909e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00028342273,0.00011275161,0.00014941035,0.00008631684,0.00014069203,8.4274143e-7,0.000012062516,0.000013387306,0.9614582,0.00075688795,0.000011599464,0.036974434],"study_design_scores_gemma":[0.0019084994,0.00081744615,0.00023996978,0.000025542537,0.000047154044,0.0000034773727,0.000027171767,0.0002624032,0.9935699,0.0013717813,0.0015558045,0.0001708497],"about_ca_topic_score_codex":0.00004584306,"about_ca_topic_score_gemma":0.000011449038,"teacher_disagreement_score":0.2935456,"about_ca_system_score_codex":0.000037946604,"about_ca_system_score_gemma":0.00013457415,"threshold_uncertainty_score":0.8907861},"labels":[],"label_agreement":null},{"id":"W4409647252","doi":"10.1007/978-1-0716-4486-7_16","title":"RNA Immunoprecipitation (RIP) from Purified Nuclei in Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; Centre for Addiction and Mental Health","funders":"","keywords":"Immunoprecipitation; RNA; Chemistry; Cell biology; Molecular biology; Biology; Biochemistry; Gene","score_opus":0.013147079230085542,"score_gpt":0.372814896277934,"score_spread":0.35966781704784845,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409647252","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36267552,0.003206773,0.63006055,0.00023672746,0.00041096788,0.00020731485,0.000014836287,0.000008465356,0.0031788556],"genre_scores_gemma":[0.36479783,0.0006507455,0.63241494,0.0010159812,0.000055265376,0.00018680509,0.00022184048,0.000025491532,0.0006311072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980855,0.00077525765,0.0003550014,0.00049554947,0.000039260987,0.00024943004],"domain_scores_gemma":[0.99928313,0.00005638928,0.00007380814,0.00051487284,0.00004529667,0.000026479605],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00059997174,0.00015506429,0.00021932871,0.00018218266,0.000030480891,0.000014809709,0.00029737357,0.0003247677,0.000034358298],"category_scores_gemma":[0.00017469395,0.00016148601,0.000078725345,0.00030325813,0.00009148727,0.0000026561702,0.000113233466,0.00016743482,0.0000062688173],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000056349054,0.00005504674,0.00094562233,0.000004534778,0.00002934767,0.0000026061562,0.000039545597,0.00016270425,0.9596541,0.0024678514,0.00010270837,0.03647959],"study_design_scores_gemma":[0.00069438486,0.000059509475,0.003801238,0.00001706454,0.000010293035,3.9405035e-7,0.000070327274,0.00018361036,0.9612731,0.0136392,0.02007904,0.00017184616],"about_ca_topic_score_codex":0.00028832888,"about_ca_topic_score_gemma":0.00008313256,"teacher_disagreement_score":0.036307745,"about_ca_system_score_codex":0.00004383092,"about_ca_system_score_gemma":0.00008097837,"threshold_uncertainty_score":0.6585208},"labels":[],"label_agreement":null},{"id":"W4409647288","doi":"10.1007/978-1-0716-4486-7_7","title":"Correlative Electron Spectroscopic Imaging (ESI) and Electron Tomography of Chromatin","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Hospital for Sick Children; McGill University; University of British Columbia","funders":"","keywords":"Correlative; Electron tomography; Electron; Tomography; Chromatin; Physics; Nuclear magnetic resonance; Chemistry; Electron microscope; Optics; Nuclear physics; Biochemistry; Philosophy; Linguistics; DNA; Scanning transmission electron microscopy","score_opus":0.004465927206306988,"score_gpt":0.4075821040533887,"score_spread":0.4031161768470817,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409647288","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1706649,0.0055859215,0.8219719,0.00017663898,0.000024838104,0.0002940138,0.0000032571008,0.000018022247,0.001260516],"genre_scores_gemma":[0.38286632,0.0005164131,0.61597043,0.0003258104,0.000014068378,0.00010825727,0.000048764356,0.00001887381,0.0001310955],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985435,0.00030526175,0.00030499723,0.00045978485,0.000032030934,0.00035439947],"domain_scores_gemma":[0.9994367,0.000044893193,0.00011736554,0.00032521313,0.000047308826,0.000028572209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00031292997,0.0001858746,0.0002716523,0.00019930494,0.000046512694,0.0000064790775,0.00018374079,0.00015724206,0.0000038753687],"category_scores_gemma":[0.00008771171,0.00019105172,0.000075125026,0.00038788994,0.00022164361,0.000002935388,0.00010458507,0.00019970052,2.6781174e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034578377,0.000036895166,0.0065606777,0.000015046593,0.000027622329,6.519334e-7,0.000009888183,0.000005241749,0.96735847,0.02188142,0.000034848425,0.004034644],"study_design_scores_gemma":[0.00031602007,0.00026635182,0.0011628148,0.000016735105,0.000017367562,0.0000061777423,0.000011294918,0.00007094246,0.96766406,0.025525108,0.004797902,0.00014520316],"about_ca_topic_score_codex":0.000023043096,"about_ca_topic_score_gemma":0.00000863294,"teacher_disagreement_score":0.2122014,"about_ca_system_score_codex":0.000029969147,"about_ca_system_score_gemma":0.00006861052,"threshold_uncertainty_score":0.7790863},"labels":[],"label_agreement":null},{"id":"W4409681777","doi":"10.1007/978-1-0716-4482-9_13","title":"Assessing MMP-2/9 Proteolytic Activity and Activation Status by Zymography in Preclinical and Clinical Tissue Samples","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Montréal","funders":"","keywords":"Zymography; Matrix metalloproteinase; Proteolytic enzymes; Chemistry; Biochemistry; Enzyme","score_opus":0.044047871449566636,"score_gpt":0.4746220375073916,"score_spread":0.430574166057825,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409681777","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.58412355,0.0011478135,0.41401035,0.00014748826,0.00008219707,0.0003613229,0.000004918991,0.00000686577,0.00011551142],"genre_scores_gemma":[0.703645,0.0004865986,0.29522863,0.0004327238,0.000036433263,0.00009129093,0.000040904113,0.000015247434,0.000023205008],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965888,0.001932375,0.00041623332,0.0006910523,0.000046670437,0.00032484875],"domain_scores_gemma":[0.9992655,0.00024144628,0.00011193977,0.0002765113,0.000030573272,0.00007400879],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018387571,0.0001867009,0.00035038101,0.00015607828,0.00004386891,0.000035269724,0.000105715175,0.0005338864,0.0000026646283],"category_scores_gemma":[0.0014825511,0.00018239216,0.000057159148,0.00021633781,0.00023681074,0.00001165219,0.00022936029,0.00033101934,1.6084107e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009630347,0.00010185704,0.025205096,0.000023198945,0.000029481158,0.0000020069788,0.000006892226,5.4778127e-7,0.8670445,0.0004001798,0.000016597405,0.10707336],"study_design_scores_gemma":[0.0009808866,0.00039155496,0.013291195,0.000051204293,0.00001664776,0.0000024384397,0.000024439192,0.0001056819,0.97370744,0.008251659,0.0029866032,0.00019025579],"about_ca_topic_score_codex":0.00013291296,"about_ca_topic_score_gemma":0.000033028435,"teacher_disagreement_score":0.11952142,"about_ca_system_score_codex":0.000016774495,"about_ca_system_score_gemma":0.00009348481,"threshold_uncertainty_score":0.74377364},"labels":[],"label_agreement":null},{"id":"W4409964504","doi":"10.1007/978-1-0716-4434-8_4","title":"BioID-Based Proximity Mapping of Transmembrane Proteins in Human Airway Cell Models","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Princess Margaret Cancer Centre; University of Toronto; Toronto Metropolitan University; University Health Network","funders":"","keywords":"Transmembrane protein; Computational biology; Airway; Cell biology; Biology; Medicine; Genetics; Receptor","score_opus":0.035451396742167074,"score_gpt":0.41479353087066717,"score_spread":0.3793421341285001,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409964504","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.17310256,0.00095435255,0.821344,0.000534653,0.000033020846,0.0011889276,0.000006837404,0.00002072431,0.0028148994],"genre_scores_gemma":[0.2943832,0.00001533676,0.7051737,0.00014298927,0.000004984018,0.00016409952,0.000013413884,0.000012369744,0.000089944704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997288,0.0012199383,0.00053714257,0.00043291162,0.0001246221,0.00039739773],"domain_scores_gemma":[0.9990844,0.00028219097,0.000075734235,0.0004229927,0.00007730227,0.00005739622],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016745533,0.00016925068,0.0006018002,0.00080701464,0.000023387158,0.0000034968284,0.00021027475,0.0002055401,0.000025969535],"category_scores_gemma":[0.00047273436,0.00015232347,0.00011247531,0.00090457086,0.00027931054,0.00002203711,0.000061500636,0.00040467555,5.103917e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019998787,0.00031842978,0.0017400358,0.00085859676,0.000016687201,0.000032728665,0.00007454458,0.0012105964,0.98338366,0.0019287238,0.0000019693928,0.01023404],"study_design_scores_gemma":[0.0024919752,0.00037993974,0.0007255551,0.0003289904,0.00001248459,0.0000013592887,0.000040323874,0.013796777,0.96416014,0.017629081,0.00032050133,0.00011288456],"about_ca_topic_score_codex":0.00020666751,"about_ca_topic_score_gemma":0.00004175092,"teacher_disagreement_score":0.121280625,"about_ca_system_score_codex":0.000100846715,"about_ca_system_score_gemma":0.00023915137,"threshold_uncertainty_score":0.62115705},"labels":[],"label_agreement":null},{"id":"W4409964564","doi":"10.1007/978-1-0716-4434-8_15","title":"ATR-Infrared Spectroscopy and Acoustic Sensing in Characterization of Blood and Pancreatic Ductal Adenocarcinoma-Derived Extracellular Vesicles","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Extracellular vesicles in disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Extracellular vesicles; Pancreatic ductal adenocarcinoma; Characterization (materials science); Vesicle; Spectroscopy; Extracellular; Chemistry; Materials science; Pancreatic cancer; Nanotechnology; Biology; Medicine; Cell biology; Internal medicine; Biochemistry; Physics; Cancer; Astronomy","score_opus":0.00775925534518742,"score_gpt":0.30605417380750394,"score_spread":0.29829491846231654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4409964564","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6917204,0.009109495,0.2987688,0.000041304666,0.000057364174,0.00023822018,0.000008627858,0.000006949297,0.00004882809],"genre_scores_gemma":[0.76604897,0.00041514612,0.23328042,0.000074543925,0.00002062142,0.000010879876,0.000069187045,0.000021214253,0.000059027545],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977281,0.0008735732,0.0004646602,0.0005784112,0.000052868756,0.000302377],"domain_scores_gemma":[0.999309,0.000077422716,0.00013919939,0.00037299027,0.000041122,0.00006026099],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006225689,0.00023008397,0.00038531897,0.00023528453,0.000034053803,0.000015449472,0.00013566036,0.0002794488,0.000003833851],"category_scores_gemma":[0.00047341298,0.00025379492,0.00005492132,0.00024430692,0.0003231729,0.000005877928,0.00021165659,0.00015596495,1.9040016e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010594739,0.000065568405,0.0626579,0.00010833496,0.000066685156,0.00006364439,0.00006470043,0.0000106260495,0.93539643,0.00026450964,8.21851e-7,0.0011948532],"study_design_scores_gemma":[0.0009707225,0.00014754833,0.06268501,0.00006766844,0.000113158174,0.000034995748,0.000065893604,0.0006565998,0.9326415,0.0023882797,0.000027391921,0.00020121754],"about_ca_topic_score_codex":0.000019672052,"about_ca_topic_score_gemma":0.000012529073,"teacher_disagreement_score":0.07432854,"about_ca_system_score_codex":0.000014938081,"about_ca_system_score_gemma":0.00007384824,"threshold_uncertainty_score":0.9999914},"labels":[],"label_agreement":null},{"id":"W4410251233","doi":"10.1007/978-1-0716-4478-2_17","title":"Loading-Controlled Zymography","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Northern Alberta Institute of Technology; University of Alberta","funders":"","keywords":"Zymography; Materials science; Chemistry; Biochemistry; Matrix metalloproteinase","score_opus":0.008741914899204445,"score_gpt":0.35982103132183263,"score_spread":0.3510791164226282,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410251233","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029638292,0.0046384647,0.95286816,0.00020924138,0.0005295939,0.00049237726,0.000004290806,0.00002395569,0.011595634],"genre_scores_gemma":[0.19138849,0.00020089923,0.8029111,0.0037727966,0.00013770738,0.00041860814,0.00006916256,0.000036555924,0.0010646837],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977778,0.00092569506,0.00035217952,0.0005275165,0.00004619879,0.00037056662],"domain_scores_gemma":[0.99929243,0.000045265402,0.00007390533,0.00048418288,0.00005246882,0.00005174594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011133559,0.0002104355,0.00037944637,0.00028830123,0.00004828408,0.000013922684,0.00030155713,0.0003675661,0.000025375906],"category_scores_gemma":[0.000508755,0.00019337675,0.00024930577,0.0003471626,0.000101493424,0.0000017316844,0.00018538625,0.00016971522,0.000004442266],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002547518,0.00005457848,0.00057841954,0.000008646419,0.00008859409,0.000007270519,0.0000049893333,0.0000075942653,0.9744806,0.018840369,0.0001891468,0.005484995],"study_design_scores_gemma":[0.002421795,0.00019209826,0.000039797294,0.000016393953,0.000022832117,0.000003939208,0.0000116929,0.00007643176,0.94859475,0.028305614,0.020128956,0.00018572838],"about_ca_topic_score_codex":0.000017451113,"about_ca_topic_score_gemma":0.000008306584,"teacher_disagreement_score":0.1617502,"about_ca_system_score_codex":0.000013645622,"about_ca_system_score_gemma":0.00006964053,"threshold_uncertainty_score":0.7885675},"labels":[],"label_agreement":null},{"id":"W4410259601","doi":"10.1007/978-1-0716-4478-2_16","title":"One- and Two-Dimensional Zymography Methods for Assessing the Family of Proteases","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; Lambton College","funders":"","keywords":"Proteases; Zymography; Biology; Genetics; Biochemistry; Matrix metalloproteinase; Enzyme","score_opus":0.026446800173754142,"score_gpt":0.44336107872495856,"score_spread":0.41691427855120444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410259601","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10906483,0.0031218803,0.8866237,0.0004444976,0.00018288223,0.00038528527,0.0000052326754,0.000006015697,0.00016571872],"genre_scores_gemma":[0.035792094,0.000057830057,0.96298856,0.0008711614,0.00003859976,0.00013402542,0.000057643305,0.000011013423,0.00004906572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801415,0.0012113133,0.00026385914,0.0003354301,0.000028551987,0.00014672097],"domain_scores_gemma":[0.9993805,0.00013355787,0.0001058136,0.00025546318,0.0001056477,0.000018976534],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015456295,0.000109091474,0.00019145448,0.00012006711,0.000059977454,0.00001216421,0.00012206727,0.00013609619,0.0000020585608],"category_scores_gemma":[0.00064275303,0.000090265065,0.0000800319,0.00021457145,0.00020071767,0.0000028587488,0.00011005608,0.00008462454,4.7796092e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003513013,0.000037969978,0.0011990068,0.000028474677,0.000048576072,8.026369e-8,0.000009850407,0.000030825446,0.9182275,0.0026712355,0.000015432806,0.0776959],"study_design_scores_gemma":[0.0004494749,0.00008437062,0.0030936787,0.000020142403,0.000030108135,0.0000021988315,0.000031317817,0.00029530944,0.9792038,0.0087246755,0.007968324,0.00009660145],"about_ca_topic_score_codex":0.000010333777,"about_ca_topic_score_gemma":0.0000011675827,"teacher_disagreement_score":0.0775993,"about_ca_system_score_codex":0.0000046707796,"about_ca_system_score_gemma":0.000056905843,"threshold_uncertainty_score":0.36809024},"labels":[],"label_agreement":null},{"id":"W4410363172","doi":"10.1007/978-1-0716-4470-6_11","title":"Polar Lipid Extraction and Analysis During Conifer Needle Abscission","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Toxicity and Pharmacological Properties","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Abscission; Extraction (chemistry); Polar; Botany; Astrobiology; Chemistry; Biology; Physics; Chromatography; Astronomy","score_opus":0.0198430995668643,"score_gpt":0.39640597643177033,"score_spread":0.376562876864906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410363172","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69393706,0.0022334391,0.3025246,0.00019086032,0.00013281041,0.00010952232,0.000009454454,0.000011701611,0.0008505791],"genre_scores_gemma":[0.9131014,0.0006148151,0.08477385,0.00081631594,0.000045729314,0.00002529927,0.0000780856,0.000008112599,0.00053641683],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984275,0.00071612553,0.00021787013,0.00038581598,0.000032645792,0.00022003992],"domain_scores_gemma":[0.9996602,0.000044363074,0.00004850418,0.00017329464,0.000026374277,0.00004726308],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005657762,0.00013803263,0.00023966064,0.00022186078,0.0000746117,0.000014214318,0.00012611557,0.0002967746,0.000046611014],"category_scores_gemma":[0.00014151803,0.00011694926,0.000091341026,0.00028292323,0.00011260825,0.0000031566692,0.00015764119,0.0001772629,0.0000015435278],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011329813,0.000032661083,0.013217339,0.000014299101,0.00017402889,0.0000067992714,0.0000120236255,0.00009450755,0.9805527,0.00021613753,0.00002321344,0.005543026],"study_design_scores_gemma":[0.00039724415,0.0000845993,0.013240237,0.0000057603716,0.000101322745,0.000008154739,0.000032723983,0.00026617746,0.9771016,0.0005635711,0.008050583,0.00014802588],"about_ca_topic_score_codex":0.000046036537,"about_ca_topic_score_gemma":0.000018783994,"teacher_disagreement_score":0.21916433,"about_ca_system_score_codex":0.00001397705,"about_ca_system_score_gemma":0.000023449775,"threshold_uncertainty_score":0.47690523},"labels":[],"label_agreement":null},{"id":"W4410601042","doi":"10.1007/978-1-0716-4558-1_9","title":"Metabolic Profiling of Tumor and Immune Cells Integrating Seahorse and Flow Cytometry","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Aquatic life and conservation","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Flow cytometry; Profiling (computer programming); Immune system; Seahorse; Biology; Computer science; Zoology; Immunology; Operating system","score_opus":0.019062563147213253,"score_gpt":0.3368137894782002,"score_spread":0.3177512263309869,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410601042","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9040059,0.00239546,0.09292535,0.00024338935,0.00005361121,0.00013989395,0.0000040909076,0.000009089824,0.00022326397],"genre_scores_gemma":[0.4054887,0.00006997803,0.5940493,0.0003304724,0.00001274516,0.000015041394,0.000008543507,6.00525e-7,0.000024629144],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99884105,0.0005562358,0.0002513608,0.00019681634,0.000030321606,0.00012422049],"domain_scores_gemma":[0.99942416,0.00040709937,0.00007264118,0.00004528455,0.00003201037,0.000018786073],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010007515,0.00008448617,0.00024344087,0.000040496598,0.000035736597,0.000009415675,0.0000846575,0.0000782739,0.000009216602],"category_scores_gemma":[0.0004143164,0.000035891397,0.00003112563,0.00040434548,0.00009301693,0.000020871204,0.00009789864,0.00009735997,2.2163405e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000006917407,0.000010059817,0.011603858,0.000009503701,0.000009624879,9.674301e-7,0.000027825974,7.208676e-7,0.8313386,0.004378133,5.036667e-7,0.15261333],"study_design_scores_gemma":[0.00011683761,0.00007007779,0.019175319,0.000026043712,0.000016763188,0.0000020312812,0.00037819578,0.00218355,0.96719205,0.0105123315,0.00024781236,0.00007900532],"about_ca_topic_score_codex":0.00018175719,"about_ca_topic_score_gemma":0.000023652192,"teacher_disagreement_score":0.5011239,"about_ca_system_score_codex":0.0000041064573,"about_ca_system_score_gemma":0.000009093794,"threshold_uncertainty_score":0.14636087},"labels":[],"label_agreement":null},{"id":"W4410601057","doi":"10.1007/978-1-0716-4558-1_12","title":"A Robust Quantitative Multiplex PCR for T-cell Receptor Repertoire Sequencing from Formalin-Fixed Paraffin-Embedded Samples","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Infection and Immunity","funders":"","keywords":"Multiplex; Multiplex polymerase chain reaction; Biology; Molecular biology; Computational biology; Polymerase chain reaction; Genetics; Gene","score_opus":0.06115555459338067,"score_gpt":0.4057665245121557,"score_spread":0.34461096991877505,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4410601057","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.06970671,0.0021623797,0.92554665,0.0004899865,0.00019674814,0.0011187652,0.0001792581,0.00006257548,0.00053695234],"genre_scores_gemma":[0.037198406,0.00020653925,0.95799255,0.0015883531,0.000053219657,0.0011345256,0.001517451,0.000047231017,0.00026174975],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99667156,0.0009177012,0.00066639687,0.0011151597,0.000058740763,0.0005704552],"domain_scores_gemma":[0.99831086,0.00031897813,0.00023254842,0.0008806711,0.00017641023,0.00008052528],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001036683,0.00039398228,0.00053171365,0.00019821477,0.0001620721,0.00002436374,0.0005727277,0.0007639344,0.000019095347],"category_scores_gemma":[0.0009877702,0.0003862283,0.00030605262,0.00032833827,0.00027470017,0.0000048141906,0.00030037927,0.00025975527,0.0000033128022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020349324,0.00009501866,0.00048615638,0.000027199496,0.000106335945,0.000002309772,0.000054841155,0.000202257,0.9764245,0.01683102,0.00049307547,0.005073773],"study_design_scores_gemma":[0.0011290561,0.0003445021,0.000052478877,0.000034348668,0.000045413653,0.0000025497102,0.00017956768,0.0018155869,0.9508858,0.011765111,0.03334129,0.00040430532],"about_ca_topic_score_codex":0.0002553564,"about_ca_topic_score_gemma":0.00012054703,"teacher_disagreement_score":0.032848213,"about_ca_system_score_codex":0.000073288924,"about_ca_system_score_gemma":0.00021101572,"threshold_uncertainty_score":0.999859},"labels":[],"label_agreement":null},{"id":"W4411209206","doi":"10.1007/978-1-0716-4534-5_25","title":"NMR Metabolomics in Livestock: An Update of Current Methods and Applications","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Metabolomics and Mass Spectrometry Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Current (fluid); Livestock; Metabolomics; Computer science; Environmental science; Engineering; Biology; Geography; Forestry; Bioinformatics; Electrical engineering","score_opus":0.02023225010957996,"score_gpt":0.4320893402520547,"score_spread":0.41185709014247474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411209206","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.07281214,0.032309726,0.8937391,0.00008918572,0.00013547642,0.000383203,0.000015985075,0.0000062229014,0.0005089526],"genre_scores_gemma":[0.021084473,0.005418412,0.97292244,0.00021528831,0.000032345353,0.00022060449,0.00005818348,0.00001651325,0.000031725398],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99714655,0.001431747,0.00049167546,0.00060190907,0.000036060886,0.00029207053],"domain_scores_gemma":[0.99914646,0.000090419904,0.00013275199,0.0005149438,0.00006615184,0.00004924282],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019483034,0.00020902875,0.00051431055,0.0003928654,0.000034649285,0.000007975769,0.0002861689,0.00021541129,0.0000046033692],"category_scores_gemma":[0.000390454,0.00020305972,0.00007974474,0.00049629743,0.00024136758,0.0000033886547,0.00036359107,0.00020330264,2.9378492e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003350642,0.00010507063,0.0043299682,0.000029814284,0.00005401853,4.6247854e-7,0.000018369394,0.000025561745,0.7946062,0.073633336,0.00000639072,0.12715727],"study_design_scores_gemma":[0.00095430977,0.00020944169,0.005467212,0.000016584083,0.00006897601,0.00000404979,0.000101013386,0.0002533371,0.8183801,0.06627595,0.107943766,0.00032523385],"about_ca_topic_score_codex":0.00002637829,"about_ca_topic_score_gemma":0.000044311415,"teacher_disagreement_score":0.12683204,"about_ca_system_score_codex":0.000014754365,"about_ca_system_score_gemma":0.00007282094,"threshold_uncertainty_score":0.82805353},"labels":[],"label_agreement":null},{"id":"W4411215176","doi":"10.1007/978-1-0716-4627-4_9","title":"Methods of a Reproducible Mouse Model of Clostridioides difficile Infection to Investigate Novel Bacterial-Based Therapies","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Clostridium difficile and Clostridium perfringens research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Clostridioides; Biology; Computational biology; Microbiology; Medicine","score_opus":0.06719908517761147,"score_gpt":0.44607687808120156,"score_spread":0.3788777929035901,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411215176","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5192638,0.00024510457,0.47907597,0.00056807115,0.00009009315,0.00045089185,0.000026799318,0.00002332898,0.0002559046],"genre_scores_gemma":[0.14711206,0.00008344031,0.85205793,0.00030117048,0.00002531093,0.00010789192,0.00003082856,0.00003059204,0.00025077089],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99689263,0.00094809895,0.000870796,0.00071382604,0.00016140082,0.00041326918],"domain_scores_gemma":[0.99778205,0.0005402079,0.00018614954,0.0010338866,0.00034206477,0.00011563996],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0034731175,0.00026853482,0.0009592635,0.001063626,0.000035759233,0.000008562495,0.00022136485,0.00031801264,0.000031797867],"category_scores_gemma":[0.004934047,0.00024168054,0.00023661644,0.0013741829,0.00032305947,0.000020934589,0.00020270782,0.00035392636,0.0000011446184],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00066047924,0.00047108988,0.0018781261,0.00029495466,0.00013445933,0.0000017937805,0.00011311027,0.0032097364,0.9749644,0.0017759281,0.000025741272,0.016470179],"study_design_scores_gemma":[0.0014849124,0.00057233067,0.00029924794,0.0001451564,0.000082111605,0.0000019820461,0.000029614503,0.008085639,0.9872199,0.0013397932,0.0005739073,0.00016539884],"about_ca_topic_score_codex":0.00058468676,"about_ca_topic_score_gemma":0.000017893657,"teacher_disagreement_score":0.37298197,"about_ca_system_score_codex":0.00013607848,"about_ca_system_score_gemma":0.000589971,"threshold_uncertainty_score":0.9855446},"labels":[],"label_agreement":null},{"id":"W4411216099","doi":"10.1007/978-1-0716-4627-4_14","title":"Quantification of β-Lactamase Inhibition Using a Luminescent Whole-Cell Biosensor","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemical Reactions and Isotopes","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Biosensor; Luminescence; Chemistry; Luminescent Measurements; Microbiology; Computational biology; Combinatorial chemistry; Chromatography; Nanotechnology; Biochemistry; Biology; Materials science; Optoelectronics","score_opus":0.13029303896292874,"score_gpt":0.5350587164665525,"score_spread":0.4047656775036237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411216099","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.575027,0.0005083654,0.4217391,0.00037183665,0.00042770276,0.00024761065,0.000018016515,0.00001876395,0.0016415719],"genre_scores_gemma":[0.7448053,0.000082420695,0.25416726,0.0006474976,0.000024484889,0.000029651506,0.000036244626,0.000010822025,0.00019633981],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997923,0.0011201901,0.00042179183,0.00028193902,0.00003330726,0.00021975835],"domain_scores_gemma":[0.9990861,0.0004535098,0.00013824133,0.00019605427,0.00008148347,0.00004464975],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00092159153,0.00013092694,0.00026223162,0.00026622607,0.00004621841,0.0000042379884,0.00010120964,0.00037416484,0.00006943701],"category_scores_gemma":[0.0004614895,0.00012805017,0.00009086229,0.00046781183,0.00020708898,0.00002184593,0.00006553737,0.0003712004,0.00000529514],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009235175,0.00032520786,0.002144248,0.000058385285,0.000026197145,0.0000060709613,0.000033895678,0.00012932369,0.9829279,0.0033993926,0.000052778003,0.010804226],"study_design_scores_gemma":[0.00073995715,0.00003576621,0.00016181139,0.000022889337,0.00005915401,0.000003800164,0.000046089404,0.003487074,0.97066957,0.0021953692,0.02247342,0.00010511502],"about_ca_topic_score_codex":0.000043852368,"about_ca_topic_score_gemma":0.0000032038952,"teacher_disagreement_score":0.16977827,"about_ca_system_score_codex":0.000069595495,"about_ca_system_score_gemma":0.000060024857,"threshold_uncertainty_score":0.52217346},"labels":[],"label_agreement":null},{"id":"W4411216111","doi":"10.1007/978-1-0716-4627-4_6","title":"Assays for Anti-Helicobacter pylori Effects of Lactic Acid Bacteria Secretions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Helicobacter pylori-related gastroenterology studies","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lallemand (Canada); Western University","funders":"","keywords":"Helicobacter pylori; Microbiology; Bacteria; Lactic acid; Biology; Genetics","score_opus":0.01730443759729992,"score_gpt":0.37990641140990183,"score_spread":0.3626019738126019,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411216111","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.30581725,0.0011005393,0.6885698,0.0019800898,0.0012237001,0.00081310794,0.000016210288,0.00004711843,0.00043220783],"genre_scores_gemma":[0.21495605,0.00014779433,0.78175277,0.0023410094,0.00008486799,0.00041656246,0.000090455826,0.00004143401,0.00016906932],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99730134,0.0010643651,0.0005799897,0.0004929586,0.000057623096,0.0005037269],"domain_scores_gemma":[0.9982772,0.00078718836,0.00015368624,0.00050210214,0.00021032857,0.00006951808],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00095162436,0.0002702689,0.0009225431,0.0004973889,0.00004936622,0.0000055539385,0.00017399194,0.00042479634,0.000017852484],"category_scores_gemma":[0.002843143,0.00024215148,0.00021472757,0.00048386326,0.00029424514,0.000028183065,0.00015747029,0.0003816511,0.000004000025],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00023972103,0.00016525213,0.07509236,0.00031907737,0.0006608769,0.00002373185,0.00008998542,6.521882e-7,0.9143053,0.0015723617,0.00009359913,0.0074370415],"study_design_scores_gemma":[0.0043052807,0.0011161877,0.1396112,0.00026530772,0.00059566804,0.000030690644,0.000038279788,0.00006718559,0.84463316,0.0023068055,0.006838476,0.00019174915],"about_ca_topic_score_codex":0.000015944324,"about_ca_topic_score_gemma":0.0000067570563,"teacher_disagreement_score":0.093182966,"about_ca_system_score_codex":0.000086100175,"about_ca_system_score_gemma":0.00008604711,"threshold_uncertainty_score":0.9874651},"labels":[],"label_agreement":null},{"id":"W4411216149","doi":"10.1007/978-1-0716-4627-4_7","title":"Assessing the Relative Affinities of Bacterial Lectins for Sugars","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Affinities; Binding affinities; Chemistry; Biology; Biochemistry","score_opus":0.03152512832494706,"score_gpt":0.4347507861188264,"score_spread":0.4032256577938793,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411216149","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1531307,0.0003208826,0.84440225,0.00047777474,0.00053131266,0.00021063506,0.00000668249,0.000005337473,0.0009143962],"genre_scores_gemma":[0.27360752,0.00009737223,0.72445166,0.00065314915,0.00015672242,0.00013185538,0.0002566,0.000021040238,0.000624088],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99868333,0.00067877566,0.00024044927,0.00023966355,0.000022940809,0.00013480971],"domain_scores_gemma":[0.9994586,0.000113623886,0.000107288535,0.00021971315,0.00009100794,0.000009728873],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007936727,0.00009387639,0.00015064859,0.0000781719,0.00005435571,0.000014367385,0.0001370906,0.00016249088,0.0000094283605],"category_scores_gemma":[0.0010204834,0.00007545414,0.00007878661,0.00015410286,0.00014367983,0.000004193365,0.00007190297,0.00008033766,1.6061121e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000045358967,0.000021926797,0.0006086508,0.000014623436,0.00004060683,1.18679914e-7,0.00005295559,0.0000097963975,0.9796432,0.011725512,0.000046488367,0.0077907224],"study_design_scores_gemma":[0.00033829536,0.00009333201,0.00095435657,0.0000109353105,0.000017655037,0.0000015739138,0.00013061684,0.000040420953,0.97002596,0.006900581,0.021409845,0.00007642892],"about_ca_topic_score_codex":0.000004917308,"about_ca_topic_score_gemma":0.0000063193093,"teacher_disagreement_score":0.120476834,"about_ca_system_score_codex":0.000010125006,"about_ca_system_score_gemma":0.00007408961,"threshold_uncertainty_score":0.30769303},"labels":[],"label_agreement":null},{"id":"W4411216286","doi":"10.1007/978-1-0716-4627-4_10","title":"Purification of Type IV and Type VI Lipoteichoic Acids from Gram-Positive Mucosal Pathogens via a Two-Step Hot Water–Phenol/Triethylammonium Acetate Extraction Method","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"TransAlta (Canada); University of Alberta","funders":"","keywords":"Phenol; Gram; Extraction (chemistry); Lipoteichoic acid; Chemistry; Chromatography; Microbiology; Biology; Organic chemistry; Bacteria; Staphylococcus aureus","score_opus":0.017718664454217284,"score_gpt":0.394351722978847,"score_spread":0.37663305852462975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411216286","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3949823,0.0014366085,0.60251325,0.00022389618,0.00024618534,0.000307382,0.00001075764,0.0000200657,0.00025957482],"genre_scores_gemma":[0.3943915,0.00018177013,0.6049436,0.00016246644,0.000029479475,0.00001450265,0.00012168029,0.0000159749,0.00013906078],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99653697,0.0019419192,0.0005022692,0.0006078666,0.000102675236,0.00030828814],"domain_scores_gemma":[0.9986143,0.0004239972,0.00012435381,0.00048552745,0.00028037798,0.00007140846],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017796601,0.00021895362,0.0006157704,0.00021805923,0.000052128613,0.000009595241,0.00010986374,0.00035681576,0.0000402019],"category_scores_gemma":[0.00072761165,0.00017566365,0.00010224855,0.0004148557,0.00020875742,0.00003940685,0.000083222716,0.0003900883,0.000006271905],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014296616,0.00010205566,0.012970641,0.000057154153,0.00012864503,0.000024298766,0.00021077388,0.0000063217663,0.90812045,0.000638197,0.0000039268893,0.07630787],"study_design_scores_gemma":[0.001139137,0.00043795674,0.051215623,0.000058099602,0.0002577422,0.000010542378,0.00012882504,0.0016159471,0.9352193,0.009161225,0.0005829926,0.00017263855],"about_ca_topic_score_codex":0.00038848733,"about_ca_topic_score_gemma":0.000081134014,"teacher_disagreement_score":0.07613523,"about_ca_system_score_codex":0.00008271451,"about_ca_system_score_gemma":0.00009791123,"threshold_uncertainty_score":0.7163356},"labels":[],"label_agreement":null},{"id":"W4411298413","doi":"10.1007/978-1-0716-4502-4_9","title":"Activity-Based Protein Profiling to Study Virus–Host and Viral-Induced MicroRNA–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Host (biology); microRNA; Biology; Virology; Profiling (computer programming); Virus; Host factors; Computational biology; Genetics; Gene; Computer science","score_opus":0.03209333014519711,"score_gpt":0.4278225738876412,"score_spread":0.3957292437424441,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411298413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8368834,0.0003446815,0.15975197,0.0007024783,0.00020627472,0.0017170542,0.000036257657,0.000038182996,0.00031966507],"genre_scores_gemma":[0.8716969,0.0000032341795,0.12682521,0.00029387727,0.0000058157384,0.0007787752,0.000034376917,0.000015411355,0.0003463782],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9953869,0.0032371597,0.00027690092,0.000601451,0.00002226023,0.00047533112],"domain_scores_gemma":[0.9990983,0.0003433248,0.00005876096,0.00040059775,0.000056835997,0.000042187476],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00096842676,0.00023422267,0.00040216406,0.00052968966,0.00016847548,0.000019510915,0.00021338687,0.00020892953,0.00006847153],"category_scores_gemma":[0.0005623514,0.00020526366,0.000069153306,0.00039548185,0.00011900029,0.000027787699,0.00024393696,0.0005298239,0.00008268849],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003824481,0.0007630951,0.005878202,0.000013318912,0.0002452375,0.00004051071,0.000115471186,0.0000010538218,0.9684507,0.0003686146,0.000008294131,0.023733055],"study_design_scores_gemma":[0.001889856,0.0008939267,0.006128528,0.000030493959,0.000032007643,0.0000058142637,0.0001333538,0.0000060674874,0.988058,0.00022639961,0.0024337745,0.00016180726],"about_ca_topic_score_codex":0.00046666074,"about_ca_topic_score_gemma":0.0001850831,"teacher_disagreement_score":0.034813467,"about_ca_system_score_codex":0.00009883089,"about_ca_system_score_gemma":0.00012318346,"threshold_uncertainty_score":0.8370409},"labels":[],"label_agreement":null},{"id":"W4411310005","doi":"10.1007/978-1-0716-4615-1_13","title":"Application of Organoids to Investigate Virus–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Organoid; Host (biology); Biology; Cell biology; Genetics","score_opus":0.03197123146929192,"score_gpt":0.4860330446394046,"score_spread":0.4540618131701127,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310005","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10682193,0.00013675557,0.8871931,0.0043073306,0.00009864558,0.00031097519,0.000006682102,0.000015104371,0.0011095146],"genre_scores_gemma":[0.18254876,0.000038486756,0.81288004,0.0041598617,0.000017480408,0.00011959834,0.000026293148,0.000008483544,0.00020100805],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99824,0.00086061057,0.0003555571,0.0002611427,0.000034833138,0.00024783544],"domain_scores_gemma":[0.9993914,0.00009061675,0.000046656376,0.0002977139,0.0000786886,0.00009494989],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00085266656,0.00008819148,0.00036110397,0.00039691108,0.000016144038,0.0000019147838,0.00012466268,0.00009717979,0.000032987875],"category_scores_gemma":[0.0026211399,0.0000805438,0.000062080086,0.0005082343,0.0001542746,0.000011267734,0.00013004059,0.00023274166,0.000011790321],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011418,0.000053611904,0.032987628,0.00003070369,0.000031303603,0.0000057740103,0.000018667455,0.000011094847,0.9385645,0.003959685,0.00017189367,0.024050955],"study_design_scores_gemma":[0.00084589154,0.00065677095,0.04002794,0.00010311166,0.00002827192,0.000025355419,0.00004329528,0.0009861233,0.9114185,0.0108574955,0.03491059,0.00009663863],"about_ca_topic_score_codex":0.00028838834,"about_ca_topic_score_gemma":0.000064523134,"teacher_disagreement_score":0.07572684,"about_ca_system_score_codex":0.000057413858,"about_ca_system_score_gemma":0.00005893616,"threshold_uncertainty_score":0.3284481},"labels":[],"label_agreement":null},{"id":"W4411310011","doi":"10.1007/978-1-0716-4615-1_11","title":"High-Throughput Yeast Two-Hybrid Technology for Investigating Molecular Virology","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Throughput; Yeast; Computational biology; Virology; Biology; Computer science; Genetics; Operating system","score_opus":0.018096164805933186,"score_gpt":0.410218961347387,"score_spread":0.3921227965414538,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310011","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24409124,0.0023310697,0.75048107,0.001422044,0.0004076465,0.0005830243,0.000041207364,0.000032257547,0.00061042083],"genre_scores_gemma":[0.23528312,0.000101805126,0.7616514,0.0017978984,0.000093606264,0.0004574987,0.0001968277,0.00005387516,0.00036396756],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964683,0.0009313411,0.00055864867,0.0010850583,0.000094333845,0.00086230884],"domain_scores_gemma":[0.9986275,0.00010947703,0.00012178288,0.00084194756,0.00019594545,0.00010336436],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012633989,0.00036601574,0.0005259257,0.000541679,0.00010852404,0.000023037566,0.00074861635,0.00055564777,0.000014350561],"category_scores_gemma":[0.0016121141,0.00033790895,0.00018630982,0.0006476613,0.0006225534,0.0000028673714,0.0007245431,0.00040967643,0.000007097422],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008860626,0.000067225556,0.0013433973,0.00004379621,0.00011729676,0.000018008192,0.000007269075,0.0006795946,0.94520307,0.026240055,0.00015782184,0.026033863],"study_design_scores_gemma":[0.00144967,0.00044599004,0.00006942234,0.00002211251,0.000026517224,0.000023132274,0.000024453448,0.000561766,0.89570206,0.07903216,0.022337178,0.00030552613],"about_ca_topic_score_codex":0.00005263061,"about_ca_topic_score_gemma":0.000026075224,"teacher_disagreement_score":0.052792106,"about_ca_system_score_codex":0.00004476431,"about_ca_system_score_gemma":0.00024975266,"threshold_uncertainty_score":0.9999073},"labels":[],"label_agreement":null},{"id":"W4411310018","doi":"10.1007/978-1-0716-4615-1_14","title":"Identification of Virus–Host Protein Interactions Via Proteomic Techniques","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Identification (biology); Computational biology; Host factors; Biology; Virus; Virology; Genetics; Ecology","score_opus":0.013413950834549394,"score_gpt":0.41593374734157423,"score_spread":0.40251979650702485,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310018","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.027537536,0.000072122064,0.9683714,0.00020505082,0.000021212663,0.00061643287,0.00001764993,0.0001133715,0.003045206],"genre_scores_gemma":[0.08395528,0.000019158355,0.9133244,0.000050497525,0.000010114373,0.0021694442,0.000019051493,0.0000145561235,0.00043749608],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988058,0.00015420033,0.0005286867,0.00032399537,0.000033138516,0.00015417706],"domain_scores_gemma":[0.9991007,0.000060044247,0.00023002249,0.00051600335,0.00007567977,0.00001759484],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00047667068,0.00012683956,0.0002201402,0.0001956125,0.000041809384,0.0000070900937,0.0002917905,0.0001822184,0.000051190444],"category_scores_gemma":[0.0002125013,0.0001331447,0.00007529944,0.00032446947,0.00012893358,0.00003122072,0.00012050182,0.00028109853,0.0000015101253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014742619,0.00007037815,0.00014285558,0.000052107174,0.0000128388465,4.4143889e-7,0.000011049752,0.0000023016378,0.94370526,0.02807108,0.0000034492148,0.027913522],"study_design_scores_gemma":[0.00006775747,0.000010272489,0.000015463429,0.000052371324,0.000008006757,0.0000016402461,0.000006321087,0.0001806458,0.8553562,0.14130381,0.002907344,0.00009015505],"about_ca_topic_score_codex":0.00006414236,"about_ca_topic_score_gemma":0.0000049293626,"teacher_disagreement_score":0.11323273,"about_ca_system_score_codex":0.00008200801,"about_ca_system_score_gemma":0.000036174395,"threshold_uncertainty_score":0.5429483},"labels":[],"label_agreement":null},{"id":"W4411310034","doi":"10.1007/978-1-0716-4615-1_16","title":"3D Tissue Culture Model for Virology Studies","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Viral gastroenteritis research and epidemiology","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Virology; Biology","score_opus":0.08585920941119278,"score_gpt":0.5608059852768743,"score_spread":0.4749467758656815,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310034","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.006187343,0.0068083415,0.98053145,0.0049599763,0.0002036924,0.00056691555,0.000012052843,0.00002822607,0.000701987],"genre_scores_gemma":[0.008682471,0.0008203649,0.98108894,0.0069005494,0.000039753097,0.0003326311,0.000038156628,0.000012763793,0.0020843556],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99761814,0.0010099211,0.0003668943,0.00042813853,0.000033907076,0.00054299127],"domain_scores_gemma":[0.99933004,0.00016004438,0.00004537906,0.00027930742,0.00011802529,0.000067220135],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014003881,0.00016088624,0.00073490076,0.00023537656,0.00004110052,0.0000025655058,0.00014789157,0.0002987046,0.000009767578],"category_scores_gemma":[0.0043299464,0.0001266113,0.000107540116,0.00017292194,0.00031745018,0.000011878109,0.0001585345,0.00030610833,0.000002779936],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005524014,0.000076626595,0.0024663715,0.00015405483,0.00023389129,0.000047971236,0.00010606671,0.00025345804,0.9260789,0.010952488,0.0025561925,0.05652153],"study_design_scores_gemma":[0.012437774,0.007785508,0.0017782289,0.00034297648,0.00035503707,0.00023916324,0.0004490263,0.17658396,0.12649758,0.47620997,0.1966553,0.00066546374],"about_ca_topic_score_codex":0.000011026066,"about_ca_topic_score_gemma":0.000020405538,"teacher_disagreement_score":0.79958135,"about_ca_system_score_codex":0.000069498674,"about_ca_system_score_gemma":0.000064454995,"threshold_uncertainty_score":0.5183663},"labels":[],"label_agreement":null},{"id":"W4411310043","doi":"10.1007/978-1-0716-4615-1_27","title":"RBD Amplicon Sequencing and Evolutionary Analysis of SARS-CoV-2 Variants from Wastewater Samples","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 detection and testing","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Amplicon; Amplicon sequencing; Biology; Computational biology; Evolutionary biology; Genetics; Gene; Polymerase chain reaction","score_opus":0.07915080203738378,"score_gpt":0.4212975226749993,"score_spread":0.34214672063761553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310043","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6125687,0.0005824844,0.3861449,0.00006854233,0.000084722866,0.00009428038,0.00001099943,0.00002155618,0.000423836],"genre_scores_gemma":[0.4461271,0.000008523799,0.5526537,0.0011485106,0.000012005451,0.000011628796,0.000023271015,0.0000079769625,0.000007355598],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982271,0.0007048824,0.0004082156,0.00040183924,0.000056852245,0.00020108336],"domain_scores_gemma":[0.9989564,0.0005471904,0.0000995845,0.00031164064,0.00006796455,0.000017245833],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069950294,0.00014087181,0.0005769137,0.00079038244,0.00003386782,0.000005919878,0.0000784495,0.0001979315,0.00001258051],"category_scores_gemma":[0.0011847976,0.00012635859,0.00012027498,0.0009695089,0.00013823913,0.000018539598,0.00010221268,0.0001814163,8.554745e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000050413033,0.000023246937,0.040327426,0.000020283034,0.0005976547,0.000019819594,0.000091339534,0.00001163269,0.95143694,0.000607735,0.00000362449,0.0068098768],"study_design_scores_gemma":[0.00055883103,0.00006374136,0.021730727,0.000058209953,0.00059250195,0.00001311782,0.00008729988,0.0048215576,0.9626216,0.009042869,0.0003112369,0.00009826916],"about_ca_topic_score_codex":0.0016261091,"about_ca_topic_score_gemma":0.000063306135,"teacher_disagreement_score":0.16650873,"about_ca_system_score_codex":0.00007972891,"about_ca_system_score_gemma":0.000068541936,"threshold_uncertainty_score":0.51527536},"labels":[],"label_agreement":null},{"id":"W4411310044","doi":"10.1007/978-1-0716-4615-1_20","title":"Strategy and Application of Viral Potency Assays in Cell and Gene Therapy","year":2025,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Potency; Genetic enhancement; Computational biology; Virology; Biology; Gene; Genetics; In vitro","score_opus":0.035135209921796876,"score_gpt":0.4500663468538093,"score_spread":0.41493113693201245,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310044","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0014898053,0.91584426,0.08135014,0.000009731397,0.000029045108,0.0008518368,0.000034409626,0.000003967774,0.00038680955],"genre_scores_gemma":[0.000102054626,0.9444386,0.054822113,0.00005238089,0.000026013995,0.00023577287,0.00020267669,0.00003463551,0.0000857843],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9955624,0.002673016,0.0005873906,0.00077879755,0.00006725231,0.00033115523],"domain_scores_gemma":[0.9990057,0.00012943296,0.00020083101,0.00056347967,0.000047812093,0.00005276276],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016569931,0.0003552577,0.0010320327,0.00038977098,0.000021351674,0.000009476031,0.00033787038,0.000821691,0.0000039208426],"category_scores_gemma":[0.00010653134,0.00031894902,0.0001420037,0.00032786196,0.00022728201,0.00000165984,0.00023378713,0.00034741935,4.4289152e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000078680634,0.000043943204,0.000034544126,0.0008089167,0.000034885747,0.0000032832077,0.0000045179145,0.0000038026228,0.36803594,0.000089972295,0.0000013474705,0.63086015],"study_design_scores_gemma":[0.0028485479,0.0055311923,0.000050860068,0.00089705054,0.0001463409,0.00004407874,0.00002487482,0.000108879445,0.66878223,0.0060174786,0.31425068,0.0012977978],"about_ca_topic_score_codex":0.00006904892,"about_ca_topic_score_gemma":0.000043080086,"teacher_disagreement_score":0.6295624,"about_ca_system_score_codex":0.000024157418,"about_ca_system_score_gemma":0.00027849822,"threshold_uncertainty_score":0.99992627},"labels":[],"label_agreement":null},{"id":"W4411310045","doi":"10.1007/978-1-0716-4615-1_17","title":"Detection of Protein Interactions During Viral Infection by Bimolecular Fluorescence Complementation","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Bimolecular fluorescence complementation; Complementation; Protein-fragment complementation assay; Fluorescence; Virology; Chemistry; Biophysics; Biology; Biochemistry; Physics; Gene; Optics","score_opus":0.010058056926146001,"score_gpt":0.39624087796202306,"score_spread":0.3861828210358771,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310045","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.42219517,0.00012923626,0.57731426,0.000027499089,0.00005321719,0.00017433126,0.0000057075117,0.00001628071,0.000084313215],"genre_scores_gemma":[0.7795339,0.000048215694,0.2201468,0.00005309027,0.000012317842,0.00004663918,0.00007810851,0.000009310507,0.00007159757],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983608,0.0006365763,0.00037560752,0.00038584918,0.000051260562,0.000189909],"domain_scores_gemma":[0.9994346,0.00001556833,0.00015504101,0.00027987818,0.000093200964,0.000021727608],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003858193,0.00015412265,0.00020678216,0.00026104026,0.00006090764,0.000008024866,0.000106552594,0.0001624331,0.0000016405155],"category_scores_gemma":[0.00022462795,0.00015733943,0.00011153124,0.00037560996,0.0001288968,0.0000049324726,0.00010117447,0.00014308757,2.7588985e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000072737406,0.00006226988,0.0019628117,0.000024067898,0.000042874133,8.7049847e-7,0.000004973353,0.000015514906,0.98145396,0.00019951156,0.000004943837,0.016155455],"study_design_scores_gemma":[0.00031535592,0.00014920879,0.0009045408,0.000034303925,0.000022409868,0.0000036993333,0.000010314071,0.0001526072,0.99535376,0.0015913139,0.0013274645,0.00013499518],"about_ca_topic_score_codex":0.00012643926,"about_ca_topic_score_gemma":0.000053352134,"teacher_disagreement_score":0.35733873,"about_ca_system_score_codex":0.00004564792,"about_ca_system_score_gemma":0.000023266084,"threshold_uncertainty_score":0.6416115},"labels":[],"label_agreement":null},{"id":"W4411310076","doi":"10.1007/978-1-0716-4615-1_2","title":"Determination of Protein Ubiquitination After Protein Denaturation in Virus–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Ubiquitin; Host (biology); Denaturation (fissile materials); Chemistry; Biology; Biochemistry; Genetics","score_opus":0.013255587646608972,"score_gpt":0.36910386583373184,"score_spread":0.3558482781871229,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310076","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43976787,0.0005633022,0.55765146,0.00014993816,0.00008808056,0.0007471594,0.000010199476,0.000007201216,0.0010147652],"genre_scores_gemma":[0.6607372,0.000011534058,0.33812037,0.0001341215,0.00002069567,0.0006854116,0.00006526082,0.000011840952,0.0002135787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977324,0.0011466679,0.00045582486,0.00039034212,0.00005828575,0.00021645003],"domain_scores_gemma":[0.99939924,0.000035883237,0.00014406367,0.00028614415,0.000111782596,0.00002289824],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009426577,0.00016063829,0.0002117144,0.0003870183,0.000023696037,0.00001079746,0.00016802044,0.00028657817,0.00002402605],"category_scores_gemma":[0.0007521231,0.00016791267,0.000076613556,0.00036570226,0.000090442714,0.000008589555,0.00012212338,0.00021069306,0.0000016420728],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015677692,0.000090819995,0.0007877719,0.00005546392,0.0000116138835,0.0000043717796,0.000057377252,0.0000053566796,0.9667533,0.002755137,0.0000014756881,0.02932056],"study_design_scores_gemma":[0.00046697128,0.00015861166,0.0015934841,0.00012116523,0.0000064805045,0.0000024907315,0.000027375274,0.0003565172,0.98914975,0.0059697586,0.0020016187,0.00014577518],"about_ca_topic_score_codex":0.000058837137,"about_ca_topic_score_gemma":0.0003304321,"teacher_disagreement_score":0.2209693,"about_ca_system_score_codex":0.000050640316,"about_ca_system_score_gemma":0.000085980195,"threshold_uncertainty_score":0.68472797},"labels":[],"label_agreement":null},{"id":"W4411310077","doi":"10.1007/978-1-0716-4615-1_32","title":"Single-Particle Cryo-EM to Investigate Nonenveloped Virus-Like Particles","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Electron Microscopy Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Virology; Particle (ecology); Virus; Biology","score_opus":0.020013712776009884,"score_gpt":0.42130614302293945,"score_spread":0.40129243024692957,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310077","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3141451,0.0005158285,0.68416595,0.00054813497,0.000055825676,0.00027400197,0.000005958255,0.00003397634,0.00025519813],"genre_scores_gemma":[0.091491744,0.00006768112,0.9028019,0.0048791086,0.000023569653,0.000281303,0.000033250817,0.00002532153,0.0003961262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982363,0.00036024727,0.00033482767,0.00057282345,0.000039058883,0.00045676192],"domain_scores_gemma":[0.9992119,0.000033555254,0.000058342917,0.00053934567,0.000059185393,0.00009768209],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000471829,0.00019493286,0.00022469433,0.00009433155,0.00006947611,0.000019613304,0.0003164573,0.00019928372,0.000009322702],"category_scores_gemma":[0.00026907114,0.00020041739,0.00007078494,0.000506426,0.00013561988,0.0000029729906,0.00026278623,0.00013915218,0.000009140636],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042143216,0.00007753828,0.0006095847,0.0000054531606,0.000019656962,0.0000018067803,0.000024637171,0.00008519143,0.97180575,0.0048980922,0.00029491744,0.022135219],"study_design_scores_gemma":[0.00023053087,0.00018673824,0.00015838511,0.000010446153,0.000010026168,0.000002614361,0.000020854766,0.000081462655,0.8970428,0.010724207,0.091341175,0.00019077804],"about_ca_topic_score_codex":0.000023339802,"about_ca_topic_score_gemma":0.00007593502,"teacher_disagreement_score":0.22265336,"about_ca_system_score_codex":0.00003853234,"about_ca_system_score_gemma":0.000067765315,"threshold_uncertainty_score":0.8172784},"labels":[],"label_agreement":null},{"id":"W4411310082","doi":"10.1007/978-1-0716-4615-1_19","title":"The Application of HSV-1 in Investigating Neurological Diseases","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Herpesvirus Infections and Treatments","field":"Medicine","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Medicine; HSL and HSV; Neuroscience; Computer science; Psychology; Virology","score_opus":0.022933602024452368,"score_gpt":0.4413080028756925,"score_spread":0.4183744008512401,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310082","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4974507,0.0008573792,0.4987494,0.00089874107,0.00006954338,0.00032414158,0.0000017663032,0.0000139087315,0.0016344027],"genre_scores_gemma":[0.73947483,0.000049839433,0.25956973,0.00069933163,0.00000740734,0.00016018293,0.000007667056,0.00000470664,0.000026310188],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.99890625,0.00060621,0.00020706929,0.00014997259,0.000022405899,0.00010805901],"domain_scores_gemma":[0.99934703,0.00038635233,0.000038797705,0.0001901305,0.000018110684,0.00001958914],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004081555,0.000056713692,0.00016111841,0.00009336626,0.000025959951,0.0000019389943,0.000053309832,0.000079533085,0.0000024148492],"category_scores_gemma":[0.00095234794,0.000036493606,0.000038535713,0.00034094206,0.00014620106,0.0000042595843,0.000041719508,0.00012026121,8.294646e-7],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025544154,0.0001200355,0.5714007,0.000012914309,0.000021870937,0.0000076319,0.00001060174,0.000026242114,0.055536296,0.024019778,0.0000026916812,0.3488157],"study_design_scores_gemma":[0.0023918725,0.00047080626,0.73338675,0.00007250074,0.000117235875,0.000012210793,0.00004122207,0.006014094,0.07454471,0.15153812,0.031265236,0.0001452312],"about_ca_topic_score_codex":0.00008555757,"about_ca_topic_score_gemma":0.000018728546,"teacher_disagreement_score":0.34867048,"about_ca_system_score_codex":0.000018314433,"about_ca_system_score_gemma":0.000046083474,"threshold_uncertainty_score":0.1488166},"labels":[],"label_agreement":null},{"id":"W4411310089","doi":"10.1007/978-1-0716-4615-1_4","title":"Analysis of the Virus–Host Protein–Protein Interaction via Co-Immunoprecipitation (Co-IP)","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunoprecipitation; Host (biology); Chemistry; Cell biology; Virology; Biology; Gene; Biochemistry; Genetics","score_opus":0.016256364432661284,"score_gpt":0.39686028980773436,"score_spread":0.3806039253750731,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310089","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.511141,0.0014815566,0.48398772,0.00020452915,0.0005270907,0.00057329546,0.000023365603,0.000024502684,0.0020369538],"genre_scores_gemma":[0.9717806,0.000025358693,0.024651188,0.00038167037,0.000005462384,0.00019852327,0.00013012672,0.000017102822,0.002809963],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9932256,0.0054955077,0.0006116768,0.00035298054,0.000026369888,0.00028788263],"domain_scores_gemma":[0.99869895,0.0003401273,0.0002669141,0.0005899744,0.00009656334,0.0000074806394],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0013538167,0.00020214713,0.00053817336,0.00082428195,0.000098907934,0.000008784571,0.00043877188,0.0004200487,0.0003780308],"category_scores_gemma":[0.0008112597,0.00015441813,0.00032193825,0.0009992436,0.0003773948,0.000037584083,0.000134844,0.0004780697,0.000026043645],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005423515,0.00011019632,0.0007878159,0.00001451251,0.0011204126,0.0000011949901,0.00017943214,0.000017606151,0.9772616,0.0029563832,0.00001981316,0.01698869],"study_design_scores_gemma":[0.00050672115,0.00017130825,0.0064154314,0.000056730663,0.0002031033,0.000003820226,0.0001349565,0.00006657285,0.9803282,0.0007393118,0.011241907,0.00013196467],"about_ca_topic_score_codex":0.00045399467,"about_ca_topic_score_gemma":0.00006635678,"teacher_disagreement_score":0.46063963,"about_ca_system_score_codex":0.00010482092,"about_ca_system_score_gemma":0.00007333666,"threshold_uncertainty_score":0.6296989},"labels":[],"label_agreement":null},{"id":"W4411310096","doi":"10.1007/978-1-0716-4615-1_30","title":"Electrophoretic Mobility Shift Assay for Identification of the Interaction Between a Viral Protein and DNA","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Electrophoretic mobility shift assay; Identification (biology); Electrophoresis; DNA; Virology; Molecular biology; Computational biology; Chemistry; Biology; Chromatography; Biochemistry; Transcription factor; Gene","score_opus":0.011166911379771362,"score_gpt":0.3627688331984222,"score_spread":0.3516019218186508,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310096","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5413874,0.00001429936,0.45787287,0.00024000602,0.00006945158,0.00032412968,0.000004971769,0.0000028147633,0.00008405989],"genre_scores_gemma":[0.9387651,0.0000016658418,0.06098964,0.000056347246,0.00000466042,0.00009338267,0.000004261925,0.000003432471,0.000081507846],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988554,0.0005888315,0.00023136115,0.00020173671,0.000018669845,0.000103968276],"domain_scores_gemma":[0.99960077,0.00011772839,0.00008886919,0.00017639175,0.000006544207,0.00000967767],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008072337,0.0000614422,0.000114153096,0.000033942448,0.000044466025,0.000008214268,0.00012040248,0.00007572534,0.000025765847],"category_scores_gemma":[0.0002690221,0.000047647012,0.000051332994,0.00013752513,0.00017572173,0.00002907415,0.000109444394,0.00010824369,9.011538e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014608823,0.00002338702,0.0023716623,0.000009487747,0.000008007357,4.546243e-8,0.00003856032,0.000006133183,0.981673,0.00068270613,0.0000034023767,0.015169017],"study_design_scores_gemma":[0.00010313195,0.000041721243,0.07429528,0.000010134803,0.000015141673,5.4839e-7,0.000012229931,0.00017955774,0.90726405,0.017212225,0.0008251104,0.000040830964],"about_ca_topic_score_codex":0.00016290687,"about_ca_topic_score_gemma":0.000040109117,"teacher_disagreement_score":0.3973777,"about_ca_system_score_codex":0.00007206008,"about_ca_system_score_gemma":0.0000073601077,"threshold_uncertainty_score":0.19429888},"labels":[],"label_agreement":null},{"id":"W4411310131","doi":"10.1007/978-1-0716-4615-1_6","title":"Applying 3D Genome Technology in Virology Research","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Virology; Genome; Computational biology; Biology; Computer science; Genetics; Gene","score_opus":0.049179002930700544,"score_gpt":0.4228136076355006,"score_spread":0.37363460470480003,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310131","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93525976,0.0024463814,0.043270007,0.011161629,0.00025491675,0.0010030796,0.000011356208,0.000068791676,0.0065240795],"genre_scores_gemma":[0.5706209,0.00014141359,0.42659125,0.0010347572,0.0000677403,0.0011795592,0.000049893093,0.000002171243,0.00031231696],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9972949,0.0014356598,0.0002910894,0.00044963104,0.000053252614,0.00047545068],"domain_scores_gemma":[0.9992019,0.00057117466,0.000031236745,0.00011363612,0.000054888602,0.000027178363],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018292208,0.00010699226,0.00024645845,0.00026068292,0.00009299736,0.000011383133,0.0004175169,0.00039174446,0.00014575699],"category_scores_gemma":[0.0005759377,0.000051728068,0.000040623065,0.0022564705,0.00021531952,0.000011673888,0.0003399318,0.00043116117,0.000013881387],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008502558,0.00004941119,0.010448788,0.0000022308138,0.000005432214,0.000014059448,0.000014649058,0.000019771935,0.84811217,0.026359564,0.0000018224,0.114963576],"study_design_scores_gemma":[0.000526332,0.00039467597,0.09050163,0.00002544591,0.0000074918607,0.000018998935,0.00027597605,0.0004563648,0.06422953,0.7084767,0.13478823,0.00029860635],"about_ca_topic_score_codex":0.00018888725,"about_ca_topic_score_gemma":0.0007486771,"teacher_disagreement_score":0.7838827,"about_ca_system_score_codex":0.000055424705,"about_ca_system_score_gemma":0.000022169623,"threshold_uncertainty_score":0.3021492},"labels":[],"label_agreement":null},{"id":"W4411310132","doi":"10.1007/978-1-0716-4615-1_34","title":"Detection of Protein Interactions and Dynamics During Viral Infection via Fluorescence Resonance Energy Transfer","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Förster resonance energy transfer; Dynamics (music); Energy transfer; Fluorescence; Resonance (particle physics); Nuclear magnetic resonance; Chemistry; Chemical physics; Biophysics; Virology; Physics; Biology; Atomic physics; Optics; Acoustics","score_opus":0.004896389781176388,"score_gpt":0.3015578961871273,"score_spread":0.2966615064059509,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310132","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.43769163,0.00003809588,0.56182367,0.00003511848,0.00010529868,0.00006970616,0.0000018257648,0.000007976172,0.0002266711],"genre_scores_gemma":[0.93503696,0.000042581913,0.06462114,0.00003533919,0.0000049453197,0.000043108816,0.0000026855632,0.0000058277346,0.00020743773],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99908787,0.00032371556,0.00020581552,0.00023162914,0.000020953663,0.00013002403],"domain_scores_gemma":[0.9997882,0.000030703384,0.00003255091,0.00012364906,0.000007781938,0.000017079894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00015818105,0.00008810526,0.00012705983,0.00010378545,0.00005571861,0.000006369852,0.000060094917,0.0000874813,0.0000474502],"category_scores_gemma":[0.00004176734,0.00009047768,0.00004207193,0.00024201526,0.00014264359,0.00007192506,0.00007844592,0.0001498335,0.0000010590747],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000030740553,0.000029750561,0.0009886232,0.0000082131155,0.0000056165713,0.0000010861614,0.000022312033,0.000024426661,0.8636724,0.0004500754,1.745826e-7,0.13476662],"study_design_scores_gemma":[0.00015765554,0.000045804398,0.03715869,0.000029113855,0.000007604569,0.000012047704,0.0000051103443,0.0019201038,0.95790535,0.001553877,0.0011303369,0.00007430399],"about_ca_topic_score_codex":0.0027549919,"about_ca_topic_score_gemma":0.0022200414,"teacher_disagreement_score":0.49734533,"about_ca_system_score_codex":0.00013390362,"about_ca_system_score_gemma":0.0000043590185,"threshold_uncertainty_score":0.4164742},"labels":[],"label_agreement":null},{"id":"W4411310138","doi":"10.1007/978-1-0716-4615-1_29","title":"Dual-Luciferase Reporter Assay to Investigate Virus–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"interferon and immune responses","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Luciferase; Dual (grammatical number); Host (biology); Virology; Chemistry; Biology; Biochemistry; Art; Genetics; Transfection; Gene","score_opus":0.023557178458909304,"score_gpt":0.40862550873752174,"score_spread":0.3850683302786124,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310138","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16305237,0.0020356746,0.81555516,0.003375507,0.0038636557,0.000521275,0.00002651764,0.00011620916,0.011453649],"genre_scores_gemma":[0.32853946,0.00013111494,0.5817859,0.029477071,0.00006532728,0.00065765955,0.00025355958,0.00009736848,0.058992486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9943498,0.003978881,0.0006329089,0.00054461515,0.00001671884,0.00047709182],"domain_scores_gemma":[0.9985359,0.00062754063,0.00010668252,0.0006102718,0.00008514652,0.000034493107],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017698506,0.00025222253,0.00046847665,0.00069039245,0.000100514946,0.000017384416,0.0002672513,0.00034816557,0.0005830595],"category_scores_gemma":[0.0027558445,0.00023033262,0.00014644986,0.0004757353,0.00026007742,0.000036051915,0.0003113421,0.0005141774,0.00026843545],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027474918,0.00009326442,0.00077760546,0.000007809799,0.00016010598,0.00004866381,0.00015902992,0.0000040672585,0.98113495,0.006390041,0.0024920665,0.008457617],"study_design_scores_gemma":[0.00040417566,0.00013261498,0.001202412,0.000045056404,0.000023377483,0.000083003324,0.000070162925,0.0000052326877,0.7523896,0.0015234894,0.24394868,0.00017219632],"about_ca_topic_score_codex":0.0002493196,"about_ca_topic_score_gemma":0.0001074021,"teacher_disagreement_score":0.24145661,"about_ca_system_score_codex":0.000092659066,"about_ca_system_score_gemma":0.00012343946,"threshold_uncertainty_score":0.9392692},"labels":[],"label_agreement":null},{"id":"W4411310141","doi":"10.1007/978-1-0716-4615-1_7","title":"In Vitro Liquid–Liquid Phase Separation Assay for Viral Proteins","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chromatography; Liquid liquid; In vitro; Liquid phase; Separation (statistics); Chemistry; Virology; Biology; Biochemistry; Physics; Computer science","score_opus":0.02126251967940081,"score_gpt":0.46148241363974674,"score_spread":0.44021989396034594,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310141","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33985236,0.00054176996,0.6580419,0.00042463254,0.00011032966,0.0006458675,0.000013212499,0.0000064051906,0.000363525],"genre_scores_gemma":[0.22977567,0.0000792541,0.76509064,0.0018133781,0.00012295744,0.001153334,0.00033459958,0.00003591691,0.0015942539],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731225,0.0012430093,0.00036954446,0.00053317426,0.000056508838,0.00048549176],"domain_scores_gemma":[0.99935234,0.000092209506,0.000061776576,0.00036571256,0.000072744595,0.000055219978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022280742,0.0001816029,0.00028833485,0.0002691311,0.000048321912,0.0000143145235,0.00027026978,0.00035404187,0.0000068143645],"category_scores_gemma":[0.0012955307,0.00017870883,0.00012195732,0.00025159394,0.00009946411,0.000004723209,0.00015050366,0.00019655687,0.0000015182536],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0030257476,0.00013912994,0.000026712445,0.000027865139,0.000032031,0.00000949359,0.000013268617,0.000041585103,0.9881738,0.00171523,0.00008894829,0.0067062234],"study_design_scores_gemma":[0.002088695,0.0014529536,0.000005991896,0.000012801526,0.000006550467,0.0000028827649,0.000015245157,0.0010658838,0.976362,0.0013072027,0.017514963,0.00016481167],"about_ca_topic_score_codex":0.00005113802,"about_ca_topic_score_gemma":0.000036376743,"teacher_disagreement_score":0.1100767,"about_ca_system_score_codex":0.000050715265,"about_ca_system_score_gemma":0.00016578162,"threshold_uncertainty_score":0.72875345},"labels":[],"label_agreement":null},{"id":"W4411310142","doi":"10.1007/978-1-0716-4615-1_25","title":"Isotope Labeling Techniques for Virus-Infected Cells","year":2025,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Isotope; Virology; Biology; Chemistry; Radiochemistry; Physics; Nuclear physics","score_opus":0.03567661632960809,"score_gpt":0.45551961523347423,"score_spread":0.4198429989038661,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310142","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[3.9701916e-8,0.49663588,0.49487758,0.000010703566,0.000036996615,0.00062412344,0.00014191066,0.00020205244,0.0074707246],"genre_scores_gemma":[1.8598195e-8,0.4966251,0.50031626,0.000042124688,0.000037295602,0.002353873,0.0002072457,0.0000375002,0.00038057842],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9974134,0.00043175608,0.00083453197,0.0008181637,0.000049835682,0.00045233985],"domain_scores_gemma":[0.9975563,0.0010693975,0.00034717887,0.00090803625,0.000069618,0.000049412294],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009222911,0.00049515587,0.0017337071,0.00047729688,0.000059909267,0.00002396049,0.00073519466,0.0012566687,0.0004734186],"category_scores_gemma":[0.00047590406,0.00045338683,0.0006027181,0.000748558,0.00007658632,0.000009952287,0.00028098072,0.0006774893,0.0000032228293],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000018024625,0.000052348052,5.242608e-7,0.007989476,0.000062704865,0.0000027759968,0.0000015776676,5.4019637e-8,0.16387136,0.016189627,0.00011708895,0.81171066],"study_design_scores_gemma":[0.00005099372,0.000021885195,2.9470406e-9,0.0018024612,0.00018195642,0.0000035034122,7.721907e-7,0.0000066755556,0.2639296,0.011839677,0.72186494,0.00029750413],"about_ca_topic_score_codex":0.000030701507,"about_ca_topic_score_gemma":0.0000032904275,"teacher_disagreement_score":0.81141317,"about_ca_system_score_codex":0.0001736365,"about_ca_system_score_gemma":0.00017585409,"threshold_uncertainty_score":0.9997918},"labels":[],"label_agreement":null},{"id":"W4411310144","doi":"10.1007/978-1-0716-4615-1_28","title":"RNA-Binding Protein Immunoprecipitation 1 (RIP) Assay to Investigate the Interactions Between Viral RNA and Host Proteins","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Immunoprecipitation; RNA; RNA-binding protein; Chemistry; Host (biology); Virology; Molecular biology; Cell biology; Biology; Biochemistry; Gene; Genetics","score_opus":0.023903762727260993,"score_gpt":0.4010229028396103,"score_spread":0.3771191401123493,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310144","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6034842,0.00023620858,0.39361855,0.0014365707,0.0000726461,0.0006477979,0.000007656723,0.000008138527,0.0004882037],"genre_scores_gemma":[0.5409965,0.00003571818,0.45501223,0.0006510408,0.000085700456,0.0006071943,0.00006350619,0.000028355185,0.0025197254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700016,0.0017733284,0.00031328807,0.00045648034,0.00007346809,0.0003832923],"domain_scores_gemma":[0.99923,0.00013366835,0.000074526135,0.00039646108,0.00007959067,0.000085754924],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002081652,0.00018093726,0.00021986294,0.00022976763,0.00016296438,0.000055417135,0.00032665336,0.00018105526,0.0000047855997],"category_scores_gemma":[0.0021752198,0.000144492,0.00006727509,0.00033294447,0.00018458559,0.000006626975,0.00038909976,0.0003528587,0.0000039480237],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004632891,0.000013815294,0.0018032894,0.000014220479,0.000066030254,0.0000024684673,0.00005086899,0.000007935232,0.9742955,0.001260388,0.000035127192,0.022404019],"study_design_scores_gemma":[0.00031506445,0.00023726044,0.0019544861,0.000057266974,0.0000126851455,0.0000025007334,0.00008108729,0.00009095135,0.9903023,0.001970059,0.0048213983,0.00015491438],"about_ca_topic_score_codex":0.00014547634,"about_ca_topic_score_gemma":0.000056915796,"teacher_disagreement_score":0.0624877,"about_ca_system_score_codex":0.000043671393,"about_ca_system_score_gemma":0.000096401265,"threshold_uncertainty_score":0.5892213},"labels":[],"label_agreement":null},{"id":"W4411310151","doi":"10.1007/978-1-0716-4615-1_8","title":"Computational Analysis of Virus–Host Interactomes","year":2025,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Computational biology; Computer science; Biology; Genetics","score_opus":0.03503763193338451,"score_gpt":0.4399145484812425,"score_spread":0.404876916547858,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310151","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000021572932,0.6395362,0.35951474,0.0000042600623,0.00010148692,0.00022663179,0.0001122046,0.000003655028,0.00047920333],"genre_scores_gemma":[0.0000070541655,0.7181928,0.27949125,0.00006467981,0.000014695469,0.00006019321,0.0020645163,0.000017857818,0.00008695871],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99716854,0.00097412715,0.0010866829,0.0004511212,0.00006514743,0.00025440467],"domain_scores_gemma":[0.99853855,0.00024605315,0.0004971345,0.00059519673,0.00008903626,0.000034032037],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00083741354,0.00037682906,0.0019279659,0.0010665102,0.000022085731,0.0000133272215,0.00054529466,0.0006028001,0.000028994487],"category_scores_gemma":[0.00046877042,0.0003192162,0.0009958927,0.0012473908,0.00008928591,0.0000020107282,0.00043679067,0.00024920117,0.0000017001822],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025968136,0.00015800327,0.00009637034,0.0055075977,0.0069383276,0.0000036053245,0.000041959385,0.00061679375,0.0074291606,0.0021174871,0.00007880805,0.97698593],"study_design_scores_gemma":[0.0003711405,0.00022149703,0.00004487654,0.0013699385,0.0045263185,0.000011690579,0.00003081986,0.0010019054,0.0030242396,0.0004933656,0.98819524,0.00070898316],"about_ca_topic_score_codex":0.000021733815,"about_ca_topic_score_gemma":0.000008376151,"teacher_disagreement_score":0.98811644,"about_ca_system_score_codex":0.00002679935,"about_ca_system_score_gemma":0.00023146594,"threshold_uncertainty_score":0.999926},"labels":[],"label_agreement":null},{"id":"W4411310153","doi":"10.1007/978-1-0716-4615-1_9","title":"Application of Single-Cell RNA Sequencing in Investigating Virus–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cytomegalovirus and herpesvirus research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Computational biology; Biology; Virology; Genetics","score_opus":0.0628156753367575,"score_gpt":0.44854901798951535,"score_spread":0.3857333426527578,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310153","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36547157,0.00045926493,0.623269,0.0003418091,0.00006417304,0.000355779,0.0000033832291,0.000014838828,0.01002012],"genre_scores_gemma":[0.5185647,0.000024371946,0.48069122,0.00049664907,0.000014024938,0.00006597356,0.000011863345,0.000011547975,0.000119662254],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998358,0.00059545017,0.00045645965,0.00029048882,0.0000664063,0.00023320652],"domain_scores_gemma":[0.9991244,0.00037417858,0.00009056228,0.00029235793,0.0000727169,0.00004577279],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001187624,0.00010542412,0.00034023405,0.00064594473,0.000023664628,0.00000569458,0.000118101576,0.00014318097,0.000025985042],"category_scores_gemma":[0.0008980806,0.000103439044,0.000063907355,0.0009027912,0.0001455638,0.000023234765,0.00010515467,0.00042304475,0.000004234133],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003436146,0.00008165731,0.013051464,0.00009380363,0.000013805442,0.000008474056,0.00015287548,0.00005072081,0.95249176,0.0022100024,0.000005510885,0.031805586],"study_design_scores_gemma":[0.0006055309,0.000084836094,0.0016548352,0.00012382912,0.000013740709,0.000004132821,0.00014018235,0.004587212,0.98608035,0.003777071,0.0028525894,0.000075693955],"about_ca_topic_score_codex":0.0017211963,"about_ca_topic_score_gemma":0.00033048866,"teacher_disagreement_score":0.15309311,"about_ca_system_score_codex":0.00034225994,"about_ca_system_score_gemma":0.00021844856,"threshold_uncertainty_score":0.4218122},"labels":[],"label_agreement":null},{"id":"W4411310154","doi":"10.1007/978-1-0716-4615-1_12","title":"Pull-Down Techniques for Determining Virus–Host Protein Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"SARS-CoV-2 and COVID-19 Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Virology; Computer science; Biology; Computational biology; Genetics","score_opus":0.06050963176208603,"score_gpt":0.5170968128958087,"score_spread":0.45658718113372265,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310154","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050069526,0.00025931187,0.9432296,0.00053191895,0.00012370716,0.0012165694,0.0000069420007,0.00007938688,0.004483004],"genre_scores_gemma":[0.018232604,0.0000025563816,0.95933443,0.020640459,0.00005158779,0.001556693,0.000006233479,0.000023040797,0.00015240515],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984167,0.00051161955,0.00030994674,0.00037473373,0.000055407552,0.00033156865],"domain_scores_gemma":[0.9990873,0.0003962738,0.000050659157,0.00035006757,0.0000968567,0.000018839113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011979808,0.00014230718,0.0003358499,0.00051222125,0.000054581746,0.0000138903815,0.00017629196,0.0001967233,0.000006719513],"category_scores_gemma":[0.0021201114,0.0001256822,0.00012689248,0.0004045961,0.00012227037,0.000022349344,0.00012705925,0.00035502997,0.000002478027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015226284,0.00006662025,0.0020557248,0.000066327215,0.000038623148,0.000023348453,0.0000278171,4.340958e-8,0.87657773,0.0020526776,0.00002634881,0.11891246],"study_design_scores_gemma":[0.0004076306,0.00022980668,0.0001288095,0.00010752168,0.000019597059,0.000012914318,0.000023959738,0.0002178394,0.79652417,0.0052595506,0.19698404,0.00008418285],"about_ca_topic_score_codex":0.00009610293,"about_ca_topic_score_gemma":0.00002788639,"teacher_disagreement_score":0.19695769,"about_ca_system_score_codex":0.00010868746,"about_ca_system_score_gemma":0.00017847127,"threshold_uncertainty_score":0.51251715},"labels":[],"label_agreement":null},{"id":"W4411310156","doi":"10.1007/978-1-0716-4615-1_24","title":"Screening for Host Proteins with Pro- and Antiviral Activity via High-Throughput CRISPR","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CRISPR; Host (biology); Throughput; Computational biology; High-throughput screening; Host factors; Biology; Computer science; Virology; Genetics; Gene; Virus; Operating system","score_opus":0.01343768750624507,"score_gpt":0.41480077567765333,"score_spread":0.40136308817140826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310156","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.15181704,0.0007045087,0.8464059,0.00019318811,0.00008650629,0.0006415203,0.00001047192,0.000014408219,0.0001264524],"genre_scores_gemma":[0.38517776,0.0000274369,0.6143577,0.00013136976,0.00003126851,0.00016403497,0.00001962833,0.00001802572,0.000072793206],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99865776,0.0002455267,0.00017147769,0.0005503281,0.00003751124,0.0003373833],"domain_scores_gemma":[0.9995062,0.000049250564,0.00004953124,0.00031346406,0.00004572708,0.00003583867],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005204902,0.00021279015,0.00027461143,0.000107186126,0.000059815662,0.000015515961,0.00013926717,0.00023984343,0.0000012491395],"category_scores_gemma":[0.00016584685,0.0001915156,0.000056662022,0.00016399047,0.00013451527,0.0000030644235,0.00015646056,0.00013955138,1.3083923e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017823331,0.000033548484,0.002145471,0.00005806728,0.000069759626,0.0000032856537,0.000014384312,0.000097097596,0.95236313,0.0005839247,0.000010900254,0.044442195],"study_design_scores_gemma":[0.0010102002,0.00052474806,0.0032500855,0.000029746758,0.000028702463,0.000007741955,0.000016091342,0.00080316357,0.98978597,0.0007967945,0.003511374,0.00023539111],"about_ca_topic_score_codex":0.00006153657,"about_ca_topic_score_gemma":0.000044620672,"teacher_disagreement_score":0.23336071,"about_ca_system_score_codex":0.000010382798,"about_ca_system_score_gemma":0.000042996107,"threshold_uncertainty_score":0.78097796},"labels":[],"label_agreement":null},{"id":"W4411310158","doi":"10.1007/978-1-0716-4615-1_21","title":"Chromatin Immunoprecipitation (ChIP)–Quantitative PCR (qPCR) Analysis of Viral Genome–Host Protein Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Chromatin immunoprecipitation; Immunoprecipitation; Genome; ChIP-on-chip; Biology; Chromatin; Host (biology); Virology; Computational biology; Molecular biology; DNA; Genetics; Gene; Gene expression; Chromatin remodeling; Promoter","score_opus":0.0352868042332743,"score_gpt":0.3969641107938938,"score_spread":0.3616773065606195,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310158","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7982234,0.00048287472,0.19776815,0.00023627673,0.000092994196,0.0002882289,0.00003894129,0.000026436022,0.0028427339],"genre_scores_gemma":[0.7716764,0.000026542204,0.22784261,0.00009673812,0.000010143468,0.0001308807,0.00006255617,0.0000010036212,0.00015310438],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99785644,0.0011826138,0.0004176733,0.0003031631,0.0000501639,0.00018992678],"domain_scores_gemma":[0.9990467,0.0005677779,0.00017074314,0.000085024265,0.00011327488,0.00001649414],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069966377,0.00013642035,0.00039934905,0.00022367819,0.00012040814,0.000011752857,0.00018446657,0.00010035807,0.0001472915],"category_scores_gemma":[0.00070627546,0.00006722381,0.00019520623,0.0020383475,0.00018268224,0.00004174533,0.00013948811,0.0001599277,0.00000446963],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003592437,0.00008057304,0.0044826632,0.000004879856,0.00043430744,6.5883575e-7,0.00012837816,0.000051690484,0.965839,0.01791755,0.0000017212315,0.011022648],"study_design_scores_gemma":[0.00024517902,0.00075118244,0.58077496,0.000045091416,0.0004354973,9.016256e-7,0.0010486565,0.0009912336,0.39370903,0.018591603,0.003086005,0.00032066286],"about_ca_topic_score_codex":0.00072073744,"about_ca_topic_score_gemma":0.0009126624,"teacher_disagreement_score":0.5762923,"about_ca_system_score_codex":0.00006149867,"about_ca_system_score_gemma":0.00001006556,"threshold_uncertainty_score":0.27413073},"labels":[],"label_agreement":null},{"id":"W4411310160","doi":"10.1007/978-1-0716-4615-1_22","title":"The Application of Base-Editing Technology to Investigate Virus–Host Interactions and Antiviral Therapeutic Strategies","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Base (topology); Virology; Virus; Biology; Computer science; Genetics; Mathematics","score_opus":0.011551322993819987,"score_gpt":0.43241751570709475,"score_spread":0.42086619271327474,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310160","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14810544,0.001647694,0.8489627,0.00066020526,0.00011304589,0.00017083957,0.0000035394742,0.000009535587,0.00032695945],"genre_scores_gemma":[0.8133756,0.00010919564,0.18616015,0.00020835575,0.000019598905,0.00008024757,0.000007576196,0.00000927622,0.000029987534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913424,0.00019087466,0.00022043935,0.00025806724,0.00002273931,0.00017361363],"domain_scores_gemma":[0.99953496,0.00007086395,0.00004825248,0.00028296688,0.00004338747,0.000019543471],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004411653,0.00010800042,0.0001385261,0.00015248476,0.00005486899,0.000012158172,0.00016993177,0.00012407586,5.263074e-7],"category_scores_gemma":[0.00023286772,0.0000904041,0.000032104414,0.0003020949,0.00018968778,0.0000018657672,0.00015429949,0.0001201237,3.7104553e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011500536,0.000008984637,0.0016959126,0.000010360945,0.000027821738,3.199e-7,0.000019606512,0.00014052952,0.9392819,0.013744192,0.0000054588972,0.04505346],"study_design_scores_gemma":[0.00012693975,0.00008014974,0.001038151,0.000012670052,0.000011281827,0.0000029263158,0.0002636524,0.0006772015,0.97878337,0.007429638,0.011493385,0.00008063199],"about_ca_topic_score_codex":0.000031388343,"about_ca_topic_score_gemma":0.00012276592,"teacher_disagreement_score":0.66527015,"about_ca_system_score_codex":0.000007461532,"about_ca_system_score_gemma":0.000035920853,"threshold_uncertainty_score":0.3686572},"labels":[],"label_agreement":null},{"id":"W4411310167","doi":"10.1007/978-1-0716-4615-1_3","title":"Viral Circuit Tracing in Biomedical Pain Research: Methods, Protocols, and Applications","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Intensive Care Unit Cognitive Disorders","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tracing; Computer science; Medicine; Neuroscience; Psychology; Programming language","score_opus":0.10032675198805503,"score_gpt":0.5477408638710567,"score_spread":0.4474141118830017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310167","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0009394497,0.00068767957,0.9821167,0.0024331477,0.00004082417,0.009071352,0.0000041442127,0.000026880694,0.0046798442],"genre_scores_gemma":[0.004595331,0.000029580488,0.96787256,0.010031762,0.0000335677,0.017217543,0.00005005156,0.00002743335,0.00014218925],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.98875695,0.009617537,0.0004485849,0.00057381374,0.00011365109,0.00048947154],"domain_scores_gemma":[0.9960322,0.0025190734,0.000046290294,0.0003498042,0.0009620287,0.000090609174],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.01303436,0.00016355228,0.0004726435,0.0013818821,0.00005763418,0.000011091406,0.00015928745,0.00035103696,0.000020987018],"category_scores_gemma":[0.034488175,0.00015534954,0.00006909008,0.0013769108,0.00076726294,0.0000158256,0.00015377953,0.00094107405,0.0000022850688],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008106642,0.00014508243,0.0043429546,0.00015530587,0.00003737331,0.000058212787,0.00016363761,3.0384882e-7,0.5058516,0.022982977,0.00009878209,0.46608266],"study_design_scores_gemma":[0.007959548,0.0018111509,0.011790679,0.0016365346,0.000103897124,0.00009591269,0.0088457335,0.001935113,0.21285132,0.53624976,0.2159452,0.0007751623],"about_ca_topic_score_codex":0.00008513516,"about_ca_topic_score_gemma":0.000013664335,"teacher_disagreement_score":0.5132668,"about_ca_system_score_codex":0.00013605911,"about_ca_system_score_gemma":0.00023519299,"threshold_uncertainty_score":0.97364473},"labels":[],"label_agreement":null},{"id":"W4411310169","doi":"10.1007/978-1-0716-4615-1_33","title":"SELEX (Systematic Evolution of Ligands by Exponential Enrichment) to Identify DNA Motifs Mirroring Chromosome Targets of the Hypothetical Transcription Factor NLRP3","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Systematic evolution of ligands by exponential enrichment; Mirroring; Computational biology; Genetics; Transcription factor; DNA; Biology; Gene; Psychology; RNA","score_opus":0.014193547658978125,"score_gpt":0.34174856203401244,"score_spread":0.3275550143750343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310169","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4751983,0.0013145871,0.5225816,0.00007940512,0.00028787798,0.00047649097,0.000018017647,0.000004443832,0.000039324317],"genre_scores_gemma":[0.9417051,0.000027447464,0.057913933,0.00007360984,0.000017767019,0.00011774092,0.0000116993615,0.000016835147,0.000115844196],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99728376,0.0012528378,0.00064267154,0.00041702003,0.00012856605,0.00027514165],"domain_scores_gemma":[0.99911183,0.000066178916,0.00018732034,0.0005109042,0.00007821633,0.000045526762],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010149181,0.00020259265,0.00046487353,0.00014389276,0.000042162537,0.000007492722,0.000432367,0.00033280771,0.0000146030925],"category_scores_gemma":[0.00056311535,0.00016185938,0.00022841872,0.00030245655,0.000105213956,0.0000035078224,0.0001451987,0.00010185612,0.0000011443539],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005806819,0.00008467597,0.00036633058,0.0005853132,0.0000858502,5.083942e-7,0.00007546159,0.000013548824,0.9970016,0.0010246135,0.000011534801,0.00069251325],"study_design_scores_gemma":[0.000354119,0.00019399366,0.0006349103,0.00027402464,0.000052161853,0.000002611291,0.000058922597,0.00003358327,0.99610937,0.0020027484,0.00014721547,0.00013636993],"about_ca_topic_score_codex":0.0000311881,"about_ca_topic_score_gemma":0.0000056226786,"teacher_disagreement_score":0.46650684,"about_ca_system_score_codex":0.000050290902,"about_ca_system_score_gemma":0.00006166703,"threshold_uncertainty_score":0.6600434},"labels":[],"label_agreement":null},{"id":"W4411310179","doi":"10.1007/978-1-0716-4615-1_1","title":"Investigation of Protein Fatty Acylation in Virus–Host Interaction","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Host (biology); Acylation; Chemistry; Biology; Biochemistry; Ecology","score_opus":0.0512746700877234,"score_gpt":0.3854859855167427,"score_spread":0.3342113154290193,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310179","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9500862,0.0001641192,0.047836006,0.00041041808,0.00009406163,0.00027738482,0.0000035819846,0.000016775492,0.001111479],"genre_scores_gemma":[0.9102859,0.000020130225,0.08943116,0.00013603893,0.000012784271,0.00007635783,0.000012658248,5.5427944e-7,0.00002445261],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99852294,0.0008369732,0.00028467728,0.00020307339,0.000031773816,0.00012055835],"domain_scores_gemma":[0.99960166,0.00021208797,0.00009082288,0.0000420101,0.000042760254,0.0000106731295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00069822697,0.000081651706,0.00016945471,0.000080407124,0.00003620094,0.0000051255315,0.00008895369,0.00012332022,0.000026683334],"category_scores_gemma":[0.0004842713,0.000040065806,0.000040567546,0.00071389443,0.00009640954,0.000040496987,0.00007736026,0.00013609657,0.0000020758057],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000021386952,0.000017452781,0.062571645,0.000005580761,0.000005647272,4.1748058e-7,0.000036417416,0.00000932834,0.90702945,0.0041489685,0.0000016803886,0.02615205],"study_design_scores_gemma":[0.00008544632,0.00010757259,0.25597084,0.000038478418,0.0000033615581,3.545206e-7,0.00009652354,0.00012000339,0.7271844,0.015695587,0.0006331245,0.00006427142],"about_ca_topic_score_codex":0.0010549265,"about_ca_topic_score_gemma":0.0012884847,"teacher_disagreement_score":0.19339919,"about_ca_system_score_codex":0.000054565895,"about_ca_system_score_gemma":0.000007439942,"threshold_uncertainty_score":0.1633836},"labels":[],"label_agreement":null},{"id":"W4411310187","doi":"10.1007/978-1-0716-4615-1_26","title":"Reverse Genetics-Based Methodology for Molecular Virology Study","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Virology; Computational biology; Biology; Molecular virology; Genetics; Virus","score_opus":0.10043825674861333,"score_gpt":0.4565517198557191,"score_spread":0.35611346310710573,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310187","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.36444637,0.0008138747,0.63171566,0.0011188495,0.0003295843,0.0009289599,0.000014968515,0.000056382316,0.00057536777],"genre_scores_gemma":[0.18460666,0.000023009756,0.811124,0.0034347023,0.000040990388,0.00065540115,0.000020855487,0.0000034087434,0.00009096439],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99441314,0.0039108787,0.00044285177,0.0006976389,0.000051575786,0.00048390278],"domain_scores_gemma":[0.9974013,0.0021684137,0.00010633727,0.00017167983,0.00011049459,0.000041771134],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0025298926,0.0002493985,0.00055914966,0.00011514029,0.00016486342,0.000011966534,0.00039006883,0.00031548514,0.00006548819],"category_scores_gemma":[0.0015471795,0.00012470093,0.0001962045,0.00069258426,0.00024699655,0.000012399199,0.00023008976,0.00022497411,0.000005039009],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000121837926,0.00024331965,0.016388815,0.0000070117003,0.00008321166,0.000011899124,0.000024781793,0.00008093507,0.92571324,0.006749129,0.00004724184,0.05052856],"study_design_scores_gemma":[0.0030554777,0.007378209,0.06713828,0.000025773177,0.00036451567,0.000010678637,0.0011582543,0.0010582238,0.6787393,0.14358696,0.09639198,0.0010923138],"about_ca_topic_score_codex":0.00024003477,"about_ca_topic_score_gemma":0.0005223435,"teacher_disagreement_score":0.24697392,"about_ca_system_score_codex":0.000055854074,"about_ca_system_score_gemma":0.000024687006,"threshold_uncertainty_score":0.50851566},"labels":[],"label_agreement":null},{"id":"W4411310192","doi":"10.1007/978-1-0716-4615-1_5","title":"Tandem Affinity Purification of Virus–Host Protein Complexes via the Strep/FLAG (SF)-TAP Tag","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA modifications and cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"Tandem affinity purification; Tandem; Flag (linear algebra); Chemistry; Host (biology); Virology; Biology; Affinity chromatography; Biochemistry; Mathematics; Genetics; Materials science","score_opus":0.025056743492118245,"score_gpt":0.3778566802209415,"score_spread":0.35279993672882326,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310192","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20568153,0.0017165404,0.78898835,0.0007448539,0.00012848603,0.00061147806,0.000022850725,0.000009448512,0.002096461],"genre_scores_gemma":[0.7709038,0.00023896473,0.22691028,0.00076278765,0.00005366283,0.0005072285,0.000115101815,0.00002041349,0.0004877282],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99771196,0.0011119774,0.00043442403,0.00043869682,0.00006656686,0.00023639378],"domain_scores_gemma":[0.99879956,0.00006118639,0.00018755841,0.00079412776,0.00012827596,0.000029268895],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011143519,0.00017295219,0.0002494166,0.00010233654,0.00008786331,0.000012517681,0.00047199675,0.00026603052,0.000028758295],"category_scores_gemma":[0.00037324414,0.0001374807,0.00011794806,0.0003429902,0.0003254552,0.0000025471109,0.00015530025,0.00017268302,0.0000019542615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000351799,0.00009596225,0.0012302645,0.000015239256,0.00005276756,6.9199643e-7,0.000025828527,0.000034856293,0.97684556,0.008674999,0.00011139947,0.012877264],"study_design_scores_gemma":[0.0003082718,0.00010303828,0.0044220313,0.000015088821,0.000023069713,0.0000020263292,0.00007319634,0.0001077031,0.96140563,0.0037704334,0.029632192,0.0001373258],"about_ca_topic_score_codex":0.0001191137,"about_ca_topic_score_gemma":0.00009658713,"teacher_disagreement_score":0.5652223,"about_ca_system_score_codex":0.000025734278,"about_ca_system_score_gemma":0.00011931634,"threshold_uncertainty_score":0.56063},"labels":[],"label_agreement":null},{"id":"W4411310226","doi":"10.1007/978-1-0716-4615-1_10","title":"CRISPR-Mediated Viral Gene Knock-In for Studying Viral–Host Interactions","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"","keywords":"CRISPR; Host (biology); Biology; Genome editing; Virology; Gene; Genetics; Computational biology","score_opus":0.016863255704768453,"score_gpt":0.4523472176038174,"score_spread":0.435483961899049,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310226","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.14474124,0.001722902,0.8518935,0.00019063613,0.0005693801,0.00041684147,0.000018729068,0.000016284846,0.0004305118],"genre_scores_gemma":[0.39565912,0.00015122278,0.60252446,0.00068809727,0.00009197398,0.00034859474,0.00018052447,0.00003695491,0.00031902804],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982273,0.00036926242,0.0004149188,0.000537628,0.000036915746,0.00041396983],"domain_scores_gemma":[0.9993321,0.00013995777,0.000053039697,0.0003770424,0.000053913456,0.000043986267],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00071808486,0.0002201342,0.00030517796,0.00030305938,0.00004552791,0.000014030424,0.0002540592,0.00024676727,0.000008637874],"category_scores_gemma":[0.0006319995,0.00023474074,0.00013294697,0.00025274107,0.00006184194,0.0000026644605,0.00018559869,0.00020589701,0.0000018820465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006991503,0.00007075593,0.0032159265,0.000023149965,0.00005691916,0.000005395468,0.000035601028,0.0006191875,0.9886701,0.0004965632,0.000076963675,0.0066595124],"study_design_scores_gemma":[0.0011846797,0.00019058734,0.002106403,0.000024305342,0.000022904958,0.0000057097977,0.0000793582,0.0017737506,0.9677733,0.0012447805,0.025329225,0.0002649748],"about_ca_topic_score_codex":0.00004681836,"about_ca_topic_score_gemma":0.00011144483,"teacher_disagreement_score":0.25091788,"about_ca_system_score_codex":0.00004270835,"about_ca_system_score_gemma":0.000060699796,"threshold_uncertainty_score":0.95724493},"labels":[],"label_agreement":null},{"id":"W4411310582","doi":"10.1007/978-1-0716-4502-4_1","title":"Activity-Based Protein Profiling (ABPP) of Cellular DeISGylating Enzymes and Inhibitor Screening","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Discovery Centre","funders":"","keywords":"Profiling (computer programming); Computational biology; Chemistry; Biology; Computer science","score_opus":0.020259185029667216,"score_gpt":0.3527839923479552,"score_spread":0.332524807318288,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411310582","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41160262,0.0018753512,0.58563733,0.00008845951,0.00005108592,0.00031548386,0.000006899865,0.0000084176345,0.00041434832],"genre_scores_gemma":[0.42525896,0.0000054788534,0.57443047,0.00010768618,0.000025508849,0.0000742556,0.000020968542,0.000013000538,0.00006366077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99778116,0.0011164977,0.000303119,0.0004539636,0.00005224021,0.00029302426],"domain_scores_gemma":[0.9993871,0.00008927774,0.00012772367,0.00029116115,0.00006153777,0.00004320214],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012595396,0.00019133504,0.0002996403,0.00017099165,0.000055120123,0.000010131584,0.00015488258,0.00032750447,0.000004719504],"category_scores_gemma":[0.0006744186,0.00019504465,0.000087465865,0.00023102316,0.00020400407,0.0000028693546,0.00019738187,0.0002037853,2.3387962e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000090803354,0.000039705323,0.004692622,0.00013571844,0.000030765405,0.0000043335417,0.000012695107,0.000066660934,0.95529836,0.004857886,0.00000135779,0.034769095],"study_design_scores_gemma":[0.0006166423,0.0002145773,0.00013425542,0.000095716794,0.000012877256,0.0000017517197,0.00002570182,0.0011764693,0.994796,0.0017159283,0.0010364137,0.00017366417],"about_ca_topic_score_codex":0.00003271175,"about_ca_topic_score_gemma":0.0000047840604,"teacher_disagreement_score":0.039497644,"about_ca_system_score_codex":0.000011158506,"about_ca_system_score_gemma":0.00010332362,"threshold_uncertainty_score":0.79536897},"labels":[],"label_agreement":null},{"id":"W4411550191","doi":"10.1007/978-1-0716-4654-0_16","title":"In Vitro Models to Compare the Duration of Action of New Therapeutic Scaffolds and Drug Eluting Medical Devices","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"3D Printing in Biomedical Research","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Drug; Biomedical engineering; Drug action; Medicine; Pharmacology; Computer science","score_opus":0.05449735982846655,"score_gpt":0.44051407138055604,"score_spread":0.3860167115520895,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550191","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28263852,0.00089514104,0.71513325,0.0009260868,0.000084184816,0.00011794883,4.6972906e-7,0.000009304457,0.00019511372],"genre_scores_gemma":[0.8099484,0.000053070362,0.18981947,0.00014696932,0.000008471556,0.00000935114,0.0000011485351,0.000005169264,0.000007937185],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99866056,0.00062822417,0.00031726027,0.00012702036,0.00011136136,0.00015559602],"domain_scores_gemma":[0.9991267,0.0006458909,0.000028849337,0.00013893226,0.00002340634,0.00003627269],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0022694129,0.000067885005,0.00019972869,0.00021980485,0.000011271234,0.0000039395604,0.00020073983,0.0000850638,0.000008438107],"category_scores_gemma":[0.00044426427,0.000052311516,0.000021757729,0.00046100217,0.000091052585,0.000018665969,0.000106373314,0.00015390362,2.099595e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018994462,0.000008742991,0.0007509466,0.00007816929,0.000019691062,9.002954e-7,0.00027802563,0.0016257566,0.83607686,0.0019033208,0.000009918605,0.15922868],"study_design_scores_gemma":[0.00023982894,0.000012689294,0.0018678794,0.00009416246,0.000005995489,0.0000012862577,0.00013903556,0.21733627,0.76515496,0.014772892,0.0003174244,0.000057608228],"about_ca_topic_score_codex":0.00034739758,"about_ca_topic_score_gemma":0.00010145278,"teacher_disagreement_score":0.5273099,"about_ca_system_score_codex":0.000030106574,"about_ca_system_score_gemma":0.00005005109,"threshold_uncertainty_score":0.21332017},"labels":[],"label_agreement":null},{"id":"W4411550193","doi":"10.1007/978-1-0716-4654-0_17","title":"Cleavage Under Targets &amp; Release Using Nuclease (CUT&amp;RUN) Protocols for the Study of Genetic and Epigenetic Regulation in Cancer","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre","funders":"","keywords":"Nuclease; Epigenetics; Cleavage (geology); Cancer; Cell biology; Chemistry; Biology; Genetics; DNA; Gene","score_opus":0.03958798421280968,"score_gpt":0.42149237757091584,"score_spread":0.38190439335810616,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550193","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.52077764,0.0009104621,0.47460327,0.000047156063,0.000049442762,0.003589044,0.000008638117,0.000002137262,0.000012208276],"genre_scores_gemma":[0.6063068,0.00012947767,0.3909212,0.0002123304,0.000025947807,0.0022873895,0.00002401856,0.000031427702,0.000061392435],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99812347,0.0006538075,0.0004685681,0.0004528378,0.00004752889,0.00025378037],"domain_scores_gemma":[0.9991402,0.000093731316,0.00016539743,0.0005029066,0.00006564207,0.000032131702],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070938334,0.00018175783,0.00028267715,0.00012775228,0.00006332501,0.0000126534205,0.00022421536,0.00021076408,0.000004812974],"category_scores_gemma":[0.00023503641,0.0001577786,0.000062201565,0.00020401356,0.00012743521,0.0000016481106,0.00019098911,0.000107957625,1.345956e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015765674,0.00019939887,0.014460767,0.000069357564,0.00007149606,7.8842095e-7,0.00011504908,0.016929027,0.9575921,0.00023931167,0.00001017206,0.010154846],"study_design_scores_gemma":[0.012709301,0.0021453653,0.26481614,0.00031000306,0.00046473657,0.000020448924,0.0012773558,0.0718457,0.5874116,0.042653628,0.014790336,0.0015553854],"about_ca_topic_score_codex":0.00032263217,"about_ca_topic_score_gemma":0.001621116,"teacher_disagreement_score":0.37018052,"about_ca_system_score_codex":0.0000408418,"about_ca_system_score_gemma":0.000106608044,"threshold_uncertainty_score":0.64340246},"labels":[],"label_agreement":null},{"id":"W4411550194","doi":"10.1007/978-1-0716-4654-0_11","title":"Efficient Migration Assay for Brain Tumor Stem Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Hamilton Health Sciences; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"Stem cell; Biology; Computational biology; Neuroscience; Cell biology","score_opus":0.021673280541129793,"score_gpt":0.39787201121102106,"score_spread":0.3761987306698913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550194","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18035975,0.0007644125,0.8150163,0.0023367566,0.00035567838,0.0007557523,0.000007780035,0.000023094395,0.00038042635],"genre_scores_gemma":[0.09596274,0.000006916411,0.9008323,0.0024918914,0.000026207177,0.00044163672,0.000024065244,0.000013944621,0.00020031803],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863404,0.00058536924,0.00023572765,0.00029947495,0.000038672464,0.00020669574],"domain_scores_gemma":[0.99895996,0.0006580804,0.00004798038,0.00023138901,0.00006596974,0.000036651287],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011396258,0.00011765261,0.00029742718,0.00021658959,0.000025939442,0.0000058267815,0.000055911954,0.00010229251,0.000008851082],"category_scores_gemma":[0.00034009185,0.0000937095,0.000118884585,0.00023800143,0.000039377413,0.0000025297468,0.00003080537,0.00007389596,0.0000031114039],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006718754,0.00030425988,0.0043958602,0.000048102374,0.00007095088,0.000037433016,0.00005930693,0.00022606472,0.9534975,0.008453999,0.0004091963,0.032430094],"study_design_scores_gemma":[0.0018375957,0.0002843252,0.0008247475,0.00005199245,0.000077059085,0.000004474892,0.00005090522,0.0059559327,0.97256297,0.0012774902,0.016987931,0.000084570944],"about_ca_topic_score_codex":0.0000229589,"about_ca_topic_score_gemma":0.000010089305,"teacher_disagreement_score":0.08581593,"about_ca_system_score_codex":0.00008254689,"about_ca_system_score_gemma":0.00005187815,"threshold_uncertainty_score":0.38213626},"labels":[],"label_agreement":null},{"id":"W4411550209","doi":"10.1007/978-1-0716-4654-0_13","title":"Chimeric Antigen Receptor T Cell Production for Brain Cancers","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CAR-T cell therapy research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Chimeric antigen receptor; Antigen; Cancer research; Neuroscience; Biology; Computational biology; Immunology; Immunotherapy; Immune system","score_opus":0.034395821996669775,"score_gpt":0.4687643660926454,"score_spread":0.4343685440959756,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550209","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.092866965,0.00212475,0.89093786,0.0066644666,0.0010631216,0.0017004029,0.000005885047,0.000046264347,0.0045902883],"genre_scores_gemma":[0.0027998874,0.0002970744,0.9783114,0.0017689762,0.00014318092,0.0003351837,0.00005264227,0.00003197599,0.016259642],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981223,0.0008092012,0.0002277612,0.00044477437,0.000059887203,0.0003361074],"domain_scores_gemma":[0.99924576,0.00022090206,0.000043850407,0.0003631494,0.00008076216,0.00004557728],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018021608,0.00012374879,0.0003260714,0.0003229726,0.000036693007,0.0000050262124,0.000121228215,0.0001685956,0.0002827993],"category_scores_gemma":[0.0010635678,0.00011436867,0.00010743942,0.0005941745,0.00013137957,0.000010155943,0.00004901515,0.00022901385,0.0000042507027],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024856173,0.000041044565,0.0019706697,0.00007154508,0.000049261762,0.0000019075228,0.00007206009,0.000014560355,0.8592771,0.00025681095,0.0011909176,0.1368055],"study_design_scores_gemma":[0.00083565596,0.0002345928,0.0003779137,0.000023545315,0.000013918653,0.00000325815,0.000035815323,0.0001523927,0.80409974,0.0020376842,0.19210176,0.00008370387],"about_ca_topic_score_codex":0.00012350938,"about_ca_topic_score_gemma":0.000011496876,"teacher_disagreement_score":0.19091085,"about_ca_system_score_codex":0.0002238585,"about_ca_system_score_gemma":0.00026986425,"threshold_uncertainty_score":0.4663819},"labels":[],"label_agreement":null},{"id":"W4411550212","doi":"10.1007/978-1-0716-4654-0_3","title":"Embryonic Stem Cell Models of Human Brain Tumors","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Embryonic stem cell; Neuroscience; Biology; Stem cell; Cell biology; Genetics; Gene","score_opus":0.026735980730710686,"score_gpt":0.3935367294849341,"score_spread":0.3668007487542234,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550212","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33539605,0.002666088,0.6510917,0.0002544619,0.00010259402,0.00033564467,0.000011244015,0.0000112019925,0.010131021],"genre_scores_gemma":[0.78367156,0.00014854618,0.20840326,0.00070655154,0.000034093457,0.00010783526,0.000108226006,0.000053134572,0.006766777],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99662584,0.0017263634,0.00045423186,0.00062282034,0.000097897144,0.00047284024],"domain_scores_gemma":[0.9989024,0.00009680236,0.00011860585,0.0007276452,0.00009230173,0.000062245905],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016463621,0.00021972322,0.00040764996,0.0003200387,0.000045916968,0.000008345643,0.0006089944,0.0003666468,0.000011550782],"category_scores_gemma":[0.00009615166,0.00022091415,0.00017132724,0.00038566755,0.00023879917,0.0000024895542,0.00050527585,0.00024437893,0.0000025166369],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041717343,0.00008899475,0.0007065746,0.00008829686,0.00004244137,0.000011029353,0.00001969342,0.00051370345,0.9896668,0.005205265,0.00020391743,0.0034115298],"study_design_scores_gemma":[0.00069193385,0.00028533174,0.00015200337,0.000029408342,0.00001004536,0.000003584546,0.00005202378,0.00064010307,0.9875583,0.008113516,0.0022777822,0.0001859831],"about_ca_topic_score_codex":0.000047374542,"about_ca_topic_score_gemma":0.000016208585,"teacher_disagreement_score":0.44827554,"about_ca_system_score_codex":0.000034321623,"about_ca_system_score_gemma":0.00016210262,"threshold_uncertainty_score":0.9008618},"labels":[],"label_agreement":null},{"id":"W4411550220","doi":"10.1007/978-1-0716-4654-0_21","title":"An In Vivo Model of Recurrent Glioblastoma","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; McMaster University; McMaster University Medical Centre; Juravinski Cancer Centre","funders":"","keywords":"Glioblastoma; In vivo; Medicine; Cancer research; Biology; Genetics","score_opus":0.02657866322273409,"score_gpt":0.4298337689893452,"score_spread":0.4032551057666111,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550220","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69200903,0.0008520998,0.3052167,0.00030972698,0.00013675856,0.00030592378,0.0000069387856,0.000014040795,0.0011487504],"genre_scores_gemma":[0.45285916,0.00005234609,0.5467644,0.00022820324,0.000005118852,0.00006759081,0.0000039752217,0.0000068205154,0.000012417056],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987949,0.0004390079,0.00028893203,0.00026206762,0.000040141345,0.00017494451],"domain_scores_gemma":[0.99947494,0.000089905465,0.000043002554,0.0003104404,0.000044794844,0.000036940466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004991122,0.00010650845,0.00036947732,0.00042715238,0.0000067406745,0.0000016462417,0.00008150227,0.00013440048,0.000017530312],"category_scores_gemma":[0.00022718724,0.00007993105,0.000067893125,0.00036763932,0.000060648577,0.000008781012,0.00004104613,0.00011058251,4.900855e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021468736,0.0007510946,0.025896762,0.000034647117,0.00003605739,0.000045217283,0.0001084801,0.0005954843,0.9210559,0.009459017,0.00001587651,0.041786753],"study_design_scores_gemma":[0.001800753,0.00086482376,0.0016692978,0.00010787031,0.000041081905,0.0000031353743,0.00003974681,0.021162342,0.96197146,0.011961083,0.00030027868,0.00007811605],"about_ca_topic_score_codex":0.00004177402,"about_ca_topic_score_gemma":0.000055433433,"teacher_disagreement_score":0.24154764,"about_ca_system_score_codex":0.000060787665,"about_ca_system_score_gemma":0.00006075198,"threshold_uncertainty_score":0.32594934},"labels":[],"label_agreement":null},{"id":"W4411550225","doi":"10.1007/978-1-0716-4654-0_4","title":"Isolation and Culture of Human Neural Stem Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenesis and neuroplasticity mechanisms","field":"Neuroscience","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; McMaster University; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"Isolation (microbiology); Biology; Neural stem cell; Neuroscience; Stem cell; Cell biology; Microbiology","score_opus":0.04155547321486058,"score_gpt":0.39094447574943053,"score_spread":0.34938900253456995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550225","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5245966,0.00008194396,0.47462675,0.00003928425,0.00022906263,0.0001232944,0.000003374167,0.000014899522,0.00028481966],"genre_scores_gemma":[0.89360094,0.000040321167,0.1051019,0.001019238,0.000008000751,0.00001137819,5.870302e-7,0.000011896389,0.00020571407],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978893,0.0013348499,0.0002278998,0.00035415433,0.000042007032,0.00015178327],"domain_scores_gemma":[0.9994768,0.00024614172,0.000073306175,0.00016567389,0.000015288268,0.000022788216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000261198,0.00010567408,0.0002064925,0.00014579418,0.00004469161,0.000008403577,0.0001430668,0.000096529046,0.0000046760674],"category_scores_gemma":[0.00013496181,0.000093036244,0.00003983068,0.00027341678,0.000099564226,0.000018132183,0.000118258075,0.00012722185,5.308832e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000010299009,0.00002311821,0.00020229994,0.00001640583,0.0000015037773,0.0000102745025,0.00004835643,0.000018681552,0.9753094,0.021745162,0.0000037206264,0.0026107803],"study_design_scores_gemma":[0.00020963603,0.00016237664,0.00007881218,0.000007707654,0.000007832334,0.0000052806013,0.00001059969,0.0010938247,0.99393225,0.0042787916,0.00014700819,0.00006588985],"about_ca_topic_score_codex":0.0000038845906,"about_ca_topic_score_gemma":0.0000010255269,"teacher_disagreement_score":0.36952484,"about_ca_system_score_codex":0.0000061421483,"about_ca_system_score_gemma":0.0000084510575,"threshold_uncertainty_score":0.3793908},"labels":[],"label_agreement":null},{"id":"W4411550233","doi":"10.1007/978-1-0716-4654-0_18","title":"A Toolkit for Single-Nucleus Characterization of Glioblastoma","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; McMaster University; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"Glioblastoma; Characterization (materials science); Nucleus; Computer science; Neuroscience; Biology; Nanotechnology; Cancer research; Materials science","score_opus":0.022739360697433684,"score_gpt":0.3921732301375088,"score_spread":0.3694338694400751,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550233","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4732923,0.0001454231,0.52507263,0.00036118377,0.00016178741,0.00040762487,0.000011461331,0.000013544006,0.000534066],"genre_scores_gemma":[0.3763428,0.00001610576,0.6228342,0.00051416585,0.000018356966,0.0001696037,0.00005126412,0.000011413485,0.00004208534],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99923813,0.00017081387,0.0002361847,0.00019201488,0.000026172442,0.00013665842],"domain_scores_gemma":[0.9994982,0.00014694573,0.00006308051,0.00018527167,0.000085225525,0.00002126657],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002724919,0.00008615566,0.00029996395,0.00022959978,0.000011604978,0.0000028174409,0.000048058882,0.00011568261,0.0000113383485],"category_scores_gemma":[0.0004856849,0.00007390428,0.000091087444,0.00025828098,0.00004652628,0.000008150469,0.000030779564,0.000041708012,5.9829756e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001581203,0.00029135752,0.0057521435,0.00005222432,0.000066645014,0.000011105115,0.000033955414,0.0000010004,0.93320143,0.0069801067,0.0000045536112,0.053447336],"study_design_scores_gemma":[0.0015307562,0.00069795793,0.005158721,0.00006745353,0.00007687045,0.0000053983513,0.000010173796,0.00013234327,0.98492444,0.0018991034,0.005445126,0.000051638828],"about_ca_topic_score_codex":0.0000060849666,"about_ca_topic_score_gemma":0.0000016554294,"teacher_disagreement_score":0.09776158,"about_ca_system_score_codex":0.00004102952,"about_ca_system_score_gemma":0.000030460675,"threshold_uncertainty_score":0.30137292},"labels":[],"label_agreement":null},{"id":"W4411550284","doi":"10.1007/978-1-0716-4654-0_22","title":"Bioluminescent Imaging of Patient-Derived Brain Tumors in Live Mice","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"bioluminescence and chemiluminescence research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; McMaster University; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"Bioluminescence; Neuroscience; Medicine; Cancer research; Chemistry; Biology; Biochemistry","score_opus":0.010445463832042128,"score_gpt":0.37288913345290925,"score_spread":0.3624436696208671,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550284","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9237431,0.0033996794,0.070765965,0.0008355071,0.00016588026,0.00042207266,0.0000099928575,0.000010414958,0.00064735505],"genre_scores_gemma":[0.91304886,0.00020276583,0.08554681,0.0008810375,0.000029181354,0.000088266504,0.000090243964,0.000024154697,0.00008868136],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99725497,0.0008139827,0.0006075105,0.0006684895,0.00008864778,0.0005664],"domain_scores_gemma":[0.99909,0.00010444229,0.00013049634,0.0004854539,0.00012789537,0.00006171564],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009079825,0.00025254773,0.0004188654,0.00037619157,0.00002745591,0.000009266277,0.00046477164,0.00028120642,0.000014933081],"category_scores_gemma":[0.0010843385,0.00025160014,0.00013604228,0.00067044457,0.0003981843,0.000005373235,0.0003963465,0.00025382114,0.0000021628302],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009847625,0.00013899164,0.0690228,0.00006309586,0.000020933125,0.000019308047,0.000069315276,0.000006056531,0.9141585,0.00021212763,0.00008349136,0.016106857],"study_design_scores_gemma":[0.0006803571,0.00013022595,0.0021198816,0.00012865294,0.0000059541585,0.0000082922015,0.0004704892,0.000115488896,0.99423015,0.00057951716,0.0013012261,0.00022977637],"about_ca_topic_score_codex":0.0002870771,"about_ca_topic_score_gemma":0.00008353817,"teacher_disagreement_score":0.08007158,"about_ca_system_score_codex":0.00004677196,"about_ca_system_score_gemma":0.00018416294,"threshold_uncertainty_score":0.9999936},"labels":[],"label_agreement":null},{"id":"W4411550294","doi":"10.1007/978-1-0716-4654-0_15","title":"Unmasking Stemness and Immune Cell Markers in Brain Tumors with Immunohistochemistry","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; McMaster University; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"Immunohistochemistry; Immune system; Pathology; Cell; Medicine; Biology; Cancer research; Immunology","score_opus":0.0075809180687360835,"score_gpt":0.35687449720160724,"score_spread":0.3492935791328712,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550294","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.95146686,0.006841285,0.03572501,0.0006849113,0.00007222341,0.00038646362,0.0000015938243,0.000017143384,0.004804527],"genre_scores_gemma":[0.75457525,0.000038836766,0.24475235,0.0003570419,0.000005086902,0.000118255695,0.000015176662,0.000014152964,0.00012383501],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9987509,0.0003819614,0.000263044,0.0003323881,0.000040383617,0.00023127742],"domain_scores_gemma":[0.99934226,0.0002633142,0.000056157027,0.00027679588,0.000027565733,0.000033892935],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006602973,0.00015717585,0.00040900483,0.00023038239,0.000021625128,0.0000062038284,0.00006980689,0.0001319353,0.000012055045],"category_scores_gemma":[0.00019595183,0.0001265757,0.000043138218,0.00036001424,0.00012557201,0.000008778094,0.00007219844,0.00019224778,3.666987e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020151648,0.00016770016,0.07590431,0.00012370631,0.00005469832,0.0004192188,0.00010422942,0.0000105108575,0.911101,0.00048493245,0.0000068807385,0.011421323],"study_design_scores_gemma":[0.0050634434,0.000271114,0.06826406,0.00048190466,0.00006467537,0.000053034997,0.00039909186,0.00010493233,0.92380345,0.0009308667,0.00037365602,0.00018976427],"about_ca_topic_score_codex":0.00015377803,"about_ca_topic_score_gemma":0.0000058093397,"teacher_disagreement_score":0.20902734,"about_ca_system_score_codex":0.00010699255,"about_ca_system_score_gemma":0.000070443784,"threshold_uncertainty_score":0.5161607},"labels":[],"label_agreement":null},{"id":"W4411550304","doi":"10.1007/978-1-0716-4654-0_6","title":"Synergy Assay for Screening Small Molecule Combinations in Brain Cancer Stem Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; McMaster University; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"Cancer stem cell; Brain cancer; Cancer research; Stem cell; Cancer; Small molecule; Chemistry; Computational biology; Biology; Medicine; Internal medicine; Cell biology; Biochemistry","score_opus":0.04320300722927971,"score_gpt":0.4244246992725951,"score_spread":0.38122169204331535,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550304","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0074942494,0.002875608,0.9832591,0.0037793308,0.0004174944,0.00065321603,0.000028506422,0.000022612325,0.0014698852],"genre_scores_gemma":[0.012630855,0.00015218643,0.97921807,0.0046786955,0.000027998272,0.00064633926,0.000042038468,0.00003313378,0.0025707027],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99792117,0.00084480835,0.00038551926,0.0004281628,0.000050818417,0.00036951056],"domain_scores_gemma":[0.99891114,0.0005861627,0.0000745408,0.00029010765,0.00007960392,0.00005846481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017067419,0.00016749781,0.00049681053,0.00046459428,0.000033371794,0.000008659372,0.00013766468,0.0001994839,0.000027478593],"category_scores_gemma":[0.00026968954,0.0001636508,0.00014443281,0.00061976584,0.00009067238,0.000011070837,0.000081977894,0.0002325948,6.098862e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100732315,0.00014177925,0.0011641248,0.00011094727,0.00009251168,0.000025533185,0.00005802991,0.00026767378,0.77951884,0.013577422,0.00026979204,0.20467259],"study_design_scores_gemma":[0.004019375,0.00018651367,0.00036503054,0.00020054402,0.00010323571,0.000003637295,0.000116768904,0.0026717614,0.92962766,0.0035021245,0.058989543,0.0002138302],"about_ca_topic_score_codex":0.0006989538,"about_ca_topic_score_gemma":0.0005018897,"teacher_disagreement_score":0.20445876,"about_ca_system_score_codex":0.00014176127,"about_ca_system_score_gemma":0.00018133824,"threshold_uncertainty_score":0.66734856},"labels":[],"label_agreement":null},{"id":"W4411550309","doi":"10.1007/978-1-0716-4654-0_9","title":"Profiling Glioma Stem Cell Dynamics via 3D-Based Cell Cycle Reporter Assays","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cell Image Analysis Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lawson Health Research Institute; St Joseph's Health Care; University of Ottawa; Western University; University of Windsor","funders":"","keywords":"Profiling (computer programming); Glioma; Dynamics (music); Cell cycle; Computational biology; Cell; Biology; Cancer research; Computer science; Genetics; Psychology","score_opus":0.007448460225301587,"score_gpt":0.3463147880676828,"score_spread":0.3388663278423812,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550309","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09497173,0.0008634814,0.89044553,0.00006865023,0.00009239695,0.00036213073,0.000005200411,0.000054760512,0.013136108],"genre_scores_gemma":[0.22822145,0.000027903918,0.7698553,0.0007413032,0.000029570847,0.000119876415,0.00026402727,0.000045776214,0.0006947463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964562,0.0013000445,0.00068698137,0.0009672304,0.000094366325,0.0004951954],"domain_scores_gemma":[0.9982894,0.00008200489,0.00025376058,0.0011650977,0.00014329799,0.00006642262],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0017570512,0.00034224452,0.00047233215,0.0003997004,0.00006223888,0.000028211,0.00047830056,0.00059603195,0.000011312195],"category_scores_gemma":[0.00012619936,0.00035133873,0.0002768193,0.0005649018,0.00016142438,0.000003601337,0.000324349,0.00027001265,0.0000031609193],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000042778724,0.00015022984,0.0038949763,0.000058288573,0.000046509784,0.00008438719,0.0000038905982,0.00020947869,0.9837886,0.0001500922,0.00011137168,0.011459381],"study_design_scores_gemma":[0.00045861077,0.00015958231,0.00004085039,0.000012449311,0.00007065338,0.000009617585,0.000023652588,0.013583239,0.9821962,0.0008147554,0.0022988124,0.00033154705],"about_ca_topic_score_codex":0.000050740684,"about_ca_topic_score_gemma":0.00003290551,"teacher_disagreement_score":0.13324971,"about_ca_system_score_codex":0.00008921024,"about_ca_system_score_gemma":0.00015482566,"threshold_uncertainty_score":0.99989384},"labels":[],"label_agreement":null},{"id":"W4411550312","doi":"10.1007/978-1-0716-4654-0_7","title":"Extracellular Flux Assays for the Measurement of Glycolysis and Mitochondrial Respiration in Brain Cancer Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; McMaster University Medical Centre; Population Health Research Institute; McMaster University","funders":"","keywords":"Glycolysis; Extracellular; Flux (metallurgy); Respiration; Mitochondrion; Cell biology; Chemistry; Biochemistry; Biology; Metabolism; Anatomy","score_opus":0.02980166986668958,"score_gpt":0.3691271862955378,"score_spread":0.33932551642884823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550312","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019273251,0.0070499275,0.9707085,0.0009591515,0.0010974964,0.00072608603,0.000015027363,0.0000037509044,0.00016681117],"genre_scores_gemma":[0.030220468,0.000658775,0.96334743,0.0021762587,0.00034935854,0.0013962517,0.000090594316,0.000045601824,0.0017152582],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978638,0.0009988934,0.000414791,0.00044008097,0.00006438349,0.00021804647],"domain_scores_gemma":[0.9992111,0.00020705763,0.00011063664,0.00033550462,0.0001120533,0.000023677196],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001819379,0.00014816978,0.00027465442,0.00016303571,0.000041682295,0.000007682227,0.00017252892,0.00032668593,0.00001885058],"category_scores_gemma":[0.0009674121,0.00012165603,0.00010031575,0.00023087495,0.00013382515,0.0000018224499,0.00008635692,0.00012502943,2.6013296e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041834445,0.00003661168,0.00042171564,0.000026691256,0.000051791303,0.0000011224099,0.00003691789,0.00048928196,0.981365,0.0021992035,0.00049461355,0.014458657],"study_design_scores_gemma":[0.001260379,0.00020762393,0.00011381152,0.000017715458,0.000035736823,9.850256e-7,0.00003137815,0.0006125926,0.93344444,0.0019875776,0.062176757,0.0001109792],"about_ca_topic_score_codex":0.000110677785,"about_ca_topic_score_gemma":0.0005003444,"teacher_disagreement_score":0.061682142,"about_ca_system_score_codex":0.00002922685,"about_ca_system_score_gemma":0.0001166128,"threshold_uncertainty_score":0.49609888},"labels":[],"label_agreement":null},{"id":"W4411550317","doi":"10.1007/978-1-0716-4654-0_14","title":"CRISPR-Cas9-Guided Genetic Manipulation of Patient-Derived Brain Tumor Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Juravinski Cancer Centre; University of Toronto; McMaster University; McMaster University Medical Centre; Discovery Centre","funders":"","keywords":"CRISPR; Genome editing; Cas9; Computational biology; Biology; Neuroscience; Genetics; Computer science; Gene","score_opus":0.013307841767172233,"score_gpt":0.40410455782177723,"score_spread":0.390796716054605,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550317","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.356044,0.0012183136,0.6418806,0.00006921123,0.00025278298,0.00020441406,0.000005733438,0.000008566786,0.00031640305],"genre_scores_gemma":[0.41152102,0.000049344184,0.58768827,0.00055413577,0.000026195177,0.000039169463,0.00004173323,0.000022999158,0.000057106183],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981589,0.0005297389,0.0005020803,0.00044957647,0.00005762613,0.00030211534],"domain_scores_gemma":[0.9992373,0.000064996755,0.000105274834,0.0004760877,0.00007225759,0.000044059594],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039799232,0.00020608908,0.0002999831,0.00020206797,0.000025245892,0.0000067553106,0.00022610751,0.00021937292,0.00001725508],"category_scores_gemma":[0.00035920317,0.0002178161,0.00012612402,0.00025493623,0.0000916682,0.0000013772167,0.00018525888,0.00011524783,0.0000014638098],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028767638,0.00003814564,0.0013737116,0.000043271637,0.00004349487,0.000007181338,0.00003479427,0.0035070297,0.9851877,0.00034605266,0.00015305037,0.009236804],"study_design_scores_gemma":[0.0004827673,0.00017731261,0.001575245,0.000020412639,0.00001978099,0.000008828962,0.00004258922,0.0007723938,0.990721,0.0013707145,0.00461766,0.00019130817],"about_ca_topic_score_codex":0.000041835687,"about_ca_topic_score_gemma":0.000012315539,"teacher_disagreement_score":0.055477034,"about_ca_system_score_codex":0.00001853828,"about_ca_system_score_gemma":0.000056088687,"threshold_uncertainty_score":0.8882283},"labels":[],"label_agreement":null},{"id":"W4411550322","doi":"10.1007/978-1-0716-4654-0_1","title":"Brain Tumor Stem Cells: New Perspectives","year":2025,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Neuroscience; Cognitive science; Psychology; Biology","score_opus":0.06270241088865121,"score_gpt":0.47826948102892025,"score_spread":0.41556707014026906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550322","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[2.7658433e-7,0.7429679,0.2532308,0.00017955493,0.00048982265,0.0008313466,0.000025709753,0.000031647283,0.0022429302],"genre_scores_gemma":[1.1983642e-8,0.6295599,0.36561212,0.00044984615,0.000111629815,0.000077367906,0.000020549058,0.000037159745,0.0041314587],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9953929,0.00243862,0.0006948187,0.0009284615,0.000091698006,0.0004535028],"domain_scores_gemma":[0.9979779,0.00081014255,0.00024195919,0.00075570063,0.000050810082,0.00016346645],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013183574,0.0005063284,0.0030384066,0.0006572856,0.000023887942,0.000012269868,0.00029634946,0.0004610871,0.00020116367],"category_scores_gemma":[0.0004008805,0.00040232175,0.00091223244,0.00082880154,0.00012549222,0.000009083544,0.00020403763,0.00076458993,0.000020141797],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016625927,0.00005639578,0.0000011440055,0.008269958,0.00026336283,0.0001907713,0.000063287946,2.2272769e-7,0.0012674466,0.0014052172,0.0012521675,0.9872134],"study_design_scores_gemma":[0.0004912114,0.00015646231,1.754523e-7,0.005283433,0.0009867352,0.00008539474,0.00009846089,7.5239075e-7,0.0017589579,0.00030904933,0.9905291,0.00030026515],"about_ca_topic_score_codex":0.00009926015,"about_ca_topic_score_gemma":0.000008562071,"teacher_disagreement_score":0.98927695,"about_ca_system_score_codex":0.0003001602,"about_ca_system_score_gemma":0.0014968971,"threshold_uncertainty_score":0.9998429},"labels":[],"label_agreement":null},{"id":"W4411550326","doi":"10.1007/978-1-0716-4654-0","title":"Brain Tumor Stem Cells","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Anschutz Medical Campus, University of Colorado; Cancer Center, University of Colorado; McMaster University; University of Windsor; University of Ottawa","keywords":"Stem cell; Biology; Neuroscience; Cell biology","score_opus":0.021179804167631888,"score_gpt":0.3751526683378921,"score_spread":0.35397286417026025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550326","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000253204,0.011039098,0.6919554,0.00046321453,0.0012193394,0.0013989668,0.00021842623,0.000048560374,0.29340377],"genre_scores_gemma":[0.000013608006,0.0004016393,0.22882257,0.0021263214,0.00021479829,0.0001492051,0.00051935465,0.00011978867,0.7676327],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9940152,0.002578392,0.0007458722,0.001560614,0.00020640713,0.0008935189],"domain_scores_gemma":[0.99771655,0.00029181977,0.0002512843,0.001437141,0.00014654634,0.0001566347],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.002275945,0.00066116167,0.00090892613,0.0005496427,0.000059818394,0.00003055479,0.0012260829,0.0014720628,0.000078793324],"category_scores_gemma":[0.00027820107,0.0006838989,0.0004268331,0.00023124504,0.0003520981,0.0000015998988,0.0011938481,0.0009406701,0.00005790862],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000077764336,0.00005004992,0.00002518719,0.00019437652,0.00017481943,0.00016600518,0.0000075896687,0.000033734774,0.9525776,0.0017278857,0.030870218,0.014094781],"study_design_scores_gemma":[0.00042257292,0.00020987703,0.0000017928635,0.000076032666,0.00002345057,0.000016778167,0.00000465635,0.000027945554,0.46065482,0.0029543478,0.53518754,0.0004201819],"about_ca_topic_score_codex":0.00001583248,"about_ca_topic_score_gemma":0.000020013593,"teacher_disagreement_score":0.50431734,"about_ca_system_score_codex":0.00017877814,"about_ca_system_score_gemma":0.0011119028,"threshold_uncertainty_score":0.9998242},"labels":[],"label_agreement":null},{"id":"W4411550331","doi":"10.1007/978-1-0716-4654-0_8","title":"O6-Methylguanine–DNA Methyltransferase (MGMT) Promoter Methylation Analysis in Glioblastoma Patients","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; McMaster University Medical Centre; Juravinski Cancer Centre","funders":"","keywords":"Glioblastoma; Methyltransferase; DNA methyltransferase; O-6-methylguanine-DNA methyltransferase; Cancer research; Methylation; Temozolomide; DNA methylation; DNA; Biology; Chemistry; Molecular biology; Genetics; Gene","score_opus":0.011750952518814937,"score_gpt":0.377193029152303,"score_spread":0.3654420766334881,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550331","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7016542,0.00063631043,0.2957803,0.00047118883,0.00015753772,0.0006693405,0.000009394913,0.000031288666,0.0005904673],"genre_scores_gemma":[0.6913667,0.000046241632,0.30759504,0.00063326076,0.000012479659,0.00021575217,0.00008496767,0.000018967121,0.000026605008],"study_design_codex":"observational","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964109,0.0017491988,0.0006445874,0.000666963,0.00012619082,0.00040216703],"domain_scores_gemma":[0.99878854,0.00038969584,0.00008180584,0.0004945979,0.00016209789,0.000083258405],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012717095,0.00028499204,0.00087937026,0.0021280868,0.000029925523,0.000013223525,0.00013157302,0.00031091762,0.00007760214],"category_scores_gemma":[0.00097031915,0.00024064927,0.0003209706,0.0031598976,0.00008083321,0.00003571361,0.00006811545,0.00027398116,0.0000052216465],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027980917,0.0012551837,0.60158634,0.000042250173,0.0012850629,0.00015152484,0.00024003556,0.00013479417,0.33182845,0.0015800593,0.000010422943,0.06160607],"study_design_scores_gemma":[0.0050059827,0.0007188044,0.20368056,0.00006737859,0.0014430995,0.000001799456,0.000041424002,0.0010892447,0.78240883,0.0045638913,0.0007212472,0.00025773398],"about_ca_topic_score_codex":0.00016662818,"about_ca_topic_score_gemma":0.00021331494,"teacher_disagreement_score":0.4505804,"about_ca_system_score_codex":0.00020553105,"about_ca_system_score_gemma":0.00006373113,"threshold_uncertainty_score":0.9813392},"labels":[],"label_agreement":null},{"id":"W4411550339","doi":"10.1007/978-1-0716-4654-0_20","title":"Modeling Glioma Stem Cell-Mediated Tumorigenesis Using Zebrafish Patient-Derived Xenograft Systems","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St Joseph's Health Care; Lawson Health Research Institute; Western University; University of Windsor","funders":"","keywords":"Zebrafish; Carcinogenesis; Glioma; Cancer research; Cell; Biology; Stem cell; Computational biology; Cell biology; Cancer; Genetics; Gene","score_opus":0.031159399664287154,"score_gpt":0.3609663588472473,"score_spread":0.32980695918296016,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550339","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.65718603,0.004518492,0.33690012,0.00005846536,0.00054107426,0.00053800445,0.000008185666,0.000055816898,0.0001938082],"genre_scores_gemma":[0.79317486,0.000047846548,0.20629837,0.00024088068,0.000025494768,0.00013934342,0.000036865025,0.000030755415,0.0000055841083],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971452,0.0010856035,0.000619499,0.00056141475,0.00011289364,0.00047543328],"domain_scores_gemma":[0.99892384,0.00021846067,0.00010708949,0.00047152,0.00016726524,0.00011181279],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005425436,0.0002897421,0.0007225876,0.00064877426,0.00007217265,0.000022798074,0.00012813421,0.00028428223,0.000008569193],"category_scores_gemma":[0.00015188885,0.00025054908,0.00017595854,0.00084082515,0.0000636903,0.000021999214,0.0001220252,0.00017783348,0.000004206657],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066246466,0.00030657373,0.0062525594,0.00010774242,0.00016906898,0.0004412596,0.00014635111,0.0051107276,0.98323625,0.00028236854,0.000006498759,0.0038743636],"study_design_scores_gemma":[0.0024913317,0.00031103782,0.00019597991,0.00025066474,0.00028327567,0.000048692385,0.0006336525,0.14249982,0.85250944,0.00019961156,0.00029628119,0.00028018572],"about_ca_topic_score_codex":0.00045225318,"about_ca_topic_score_gemma":0.000005828845,"teacher_disagreement_score":0.1373891,"about_ca_system_score_codex":0.00020167087,"about_ca_system_score_gemma":0.00012850226,"threshold_uncertainty_score":0.9999947},"labels":[],"label_agreement":null},{"id":"W4411550343","doi":"10.1007/978-1-0716-4654-0_19","title":"Using GlioVis to Explore, Analyze, and Visualize Brain Tumor Multi-Omics Datasets","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bioinformatics and Genomic Networks","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Omics; Computational biology; Computer science; Data science; Biology; Bioinformatics","score_opus":0.048469220338657776,"score_gpt":0.4400956629265161,"score_spread":0.3916264425878583,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550343","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08716172,0.0012466247,0.9106364,0.00023082267,0.00019728893,0.0002958915,0.00006672328,0.000008766169,0.0001557343],"genre_scores_gemma":[0.014553383,0.00007205674,0.97863626,0.006255774,0.000044920835,0.000033643002,0.000314805,0.00002411449,0.000065059096],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981428,0.0004879159,0.00042834916,0.00050563546,0.00003983174,0.0003955108],"domain_scores_gemma":[0.9991857,0.00006302735,0.00009006243,0.00051931845,0.000038172497,0.00010372861],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010679609,0.00023638761,0.00033522103,0.00023773604,0.00006474696,0.000030893316,0.00029258305,0.00025030388,0.0000054610637],"category_scores_gemma":[0.00042684827,0.00023589499,0.00007417061,0.00033316098,0.00012781988,0.0000033150736,0.0005882398,0.00016006327,0.0000016484919],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000065612156,0.00004127549,0.00093877205,0.000027885433,0.000077980025,0.000012528865,0.000056256944,0.0003793438,0.9803861,0.001447407,0.0006522936,0.015914593],"study_design_scores_gemma":[0.0035996472,0.00057069724,0.0009860753,0.0001097068,0.0001204497,0.000109049215,0.00046002894,0.047671776,0.7661815,0.01134281,0.16748796,0.0013602411],"about_ca_topic_score_codex":0.000054159995,"about_ca_topic_score_gemma":0.000030087445,"teacher_disagreement_score":0.21420449,"about_ca_system_score_codex":0.000025899459,"about_ca_system_score_gemma":0.000075038115,"threshold_uncertainty_score":0.96195185},"labels":[],"label_agreement":null},{"id":"W4411550350","doi":"10.1007/978-1-0716-4654-0_2","title":"Isolation and Propagation of Brain Tumor Stem Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University Medical Centre; Juravinski Cancer Centre; McMaster University","funders":"","keywords":"Isolation (microbiology); Neuroscience; History; Biology; Bioinformatics","score_opus":0.020140236331780755,"score_gpt":0.3897948075175732,"score_spread":0.3696545711857925,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550350","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10717645,0.0011383942,0.8898983,0.0005712538,0.00011905998,0.00025156775,0.0000023949224,0.0000067647907,0.000835811],"genre_scores_gemma":[0.08815316,0.000052542826,0.9105315,0.0008953252,0.000011422709,0.000020349113,0.000005257736,0.000006814221,0.00032361352],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991445,0.0003728823,0.0002017159,0.00016481472,0.000027443366,0.000088656954],"domain_scores_gemma":[0.9996466,0.00011168502,0.000057868507,0.00012872368,0.00003602457,0.000019093086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007174003,0.00006092772,0.00022541927,0.00015591049,0.000008738896,0.0000018803056,0.000026815307,0.000058557802,0.000010776035],"category_scores_gemma":[0.00008709607,0.000052686533,0.00003344535,0.0002107018,0.000060590628,0.0000078254225,0.000029431056,0.00007464729,3.2739274e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052870822,0.00002050753,0.0020478617,0.00009812899,0.000016817092,0.0000035624832,0.000038461498,0.0000043938576,0.8807083,0.0024304343,0.000021567519,0.11455712],"study_design_scores_gemma":[0.00065402826,0.00013806381,0.0009475985,0.000048238,0.000037939506,0.000004659102,0.0000445202,0.00045478987,0.9920642,0.0017520252,0.0038113235,0.000042610576],"about_ca_topic_score_codex":0.000038771723,"about_ca_topic_score_gemma":0.0000049737378,"teacher_disagreement_score":0.11451451,"about_ca_system_score_codex":0.000023229688,"about_ca_system_score_gemma":0.0000520453,"threshold_uncertainty_score":0.21484944},"labels":[],"label_agreement":null},{"id":"W4411550363","doi":"10.1007/978-1-0716-4654-0_23","title":"Growth Dynamics of Brain Tumor Through the Lens of MT-Weighted MRI","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Glioma Diagnosis and Treatment","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Dynamics (music); Lens (geology); Neuroscience; Nuclear magnetic resonance; Psychology; Physics; Optics","score_opus":0.017871685824873453,"score_gpt":0.38714270721506944,"score_spread":0.36927102139019596,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550363","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.20313756,0.0023957968,0.7742666,0.012333983,0.00026992074,0.00063298515,0.0000260808,0.000018675655,0.0069183777],"genre_scores_gemma":[0.33228633,0.000117158794,0.66560864,0.0018329266,0.000011668832,0.000057850037,0.00003459224,0.000012978081,0.000037848924],"study_design_codex":"theoretical_or_conceptual","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99847656,0.0007341165,0.00035016195,0.00021280204,0.00005658431,0.00016978839],"domain_scores_gemma":[0.99874336,0.0006531459,0.00011050235,0.00036800362,0.00011004049,0.000014926997],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005631473,0.00012000369,0.0004514695,0.00013724658,0.000016942227,0.0000014369359,0.00013022353,0.000104678,0.000019577892],"category_scores_gemma":[0.0007086166,0.00007532508,0.00013621578,0.00046929758,0.0002330282,0.000008242395,0.00008239364,0.00012685482,5.9995557e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012847278,0.00080737786,0.049717143,0.00014808949,0.00045366396,0.00007682092,0.0003505428,0.000010378271,0.42211285,0.51931864,0.00019979646,0.0066761808],"study_design_scores_gemma":[0.0026230402,0.00073431944,0.011164594,0.0001670858,0.00026544344,0.000018645456,0.00024752,0.0012575218,0.8748853,0.10588183,0.00262857,0.00012612157],"about_ca_topic_score_codex":0.00023723178,"about_ca_topic_score_gemma":0.000030401552,"teacher_disagreement_score":0.45277244,"about_ca_system_score_codex":0.00004874963,"about_ca_system_score_gemma":0.000061045954,"threshold_uncertainty_score":0.30716676},"labels":[],"label_agreement":null},{"id":"W4411550364","doi":"10.1007/978-1-0716-4654-0_5","title":"Metabolic Assays for Brain Cancer Cells","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Cancer; Computational biology; Neuroscience; Brain cancer; Biology; Medicine; Internal medicine","score_opus":0.01599942146839665,"score_gpt":0.40090601464726827,"score_spread":0.3849065931788716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411550364","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008376414,0.03364062,0.95109284,0.00091726665,0.0038886357,0.0005987027,0.00007821221,0.00001951278,0.0013877904],"genre_scores_gemma":[0.0030443077,0.0036422487,0.97710705,0.008947477,0.0010989704,0.0011495256,0.00015430289,0.00007012196,0.0047860174],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975613,0.0007735948,0.00037847785,0.000705133,0.000053310425,0.0005281792],"domain_scores_gemma":[0.9990552,0.00012778757,0.00009899499,0.0005417064,0.00010564481,0.00007064065],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0013524392,0.00026956675,0.00047987426,0.0002114521,0.000062420666,0.000016416692,0.00038438095,0.00043770595,0.000026497106],"category_scores_gemma":[0.00057320215,0.00026550124,0.00025709445,0.00031933415,0.00014812133,0.0000023591422,0.00018417914,0.0001675266,0.0000017651053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000083182014,0.000042358388,0.00019601833,0.000026023567,0.0001181027,5.636564e-7,0.00001688587,0.00008855604,0.9107668,0.007779413,0.004730908,0.0761512],"study_design_scores_gemma":[0.0006650556,0.000042783715,0.00010302262,0.000007022575,0.000036179976,0.0000011248327,0.000010319139,0.000050726074,0.52017206,0.0031489169,0.4756105,0.00015229057],"about_ca_topic_score_codex":0.00012576678,"about_ca_topic_score_gemma":0.00012702604,"teacher_disagreement_score":0.47087958,"about_ca_system_score_codex":0.000021985881,"about_ca_system_score_gemma":0.00024053498,"threshold_uncertainty_score":0.99997973},"labels":[],"label_agreement":null},{"id":"W4411615101","doi":"10.1007/978-1-0716-4654-0_10","title":"Proximity Ligation Assay","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University; Discovery Centre; Juravinski Cancer Centre","funders":"","keywords":"Proximity ligation assay; Ligation; Computational biology; Biology; Molecular biology; Genetics","score_opus":0.010928592606612192,"score_gpt":0.4189956136495653,"score_spread":0.4080670210429531,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411615101","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.009203973,0.0009057279,0.9866573,0.00022245156,0.00016612836,0.00031795973,0.000003852084,0.000039334875,0.0024832655],"genre_scores_gemma":[0.013853395,0.00008658946,0.9846772,0.0008628967,0.000024237714,0.000113914444,0.000057313697,0.000016207438,0.00030826643],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980748,0.00083458726,0.00027079508,0.0004984862,0.000035877085,0.00028543544],"domain_scores_gemma":[0.9993285,0.000039818187,0.000067123074,0.00047019948,0.00006509059,0.000029288543],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011135708,0.00016698358,0.00020114564,0.00014631651,0.000038703718,0.00000944946,0.00028870668,0.00035578053,0.0000062007352],"category_scores_gemma":[0.00087159924,0.00016827222,0.00007457182,0.00028070417,0.00017528172,0.0000030264155,0.00021896155,0.00018521222,0.0000018367965],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028906617,0.000035552486,0.004348153,0.000010873104,0.000015186855,0.0000024689214,0.000006377019,0.0000126253935,0.95683974,0.006817485,0.00010371643,0.03177892],"study_design_scores_gemma":[0.00020844271,0.00009136621,0.00037360747,0.00001861836,0.0000062981585,0.0000027883013,0.000008778554,0.00007183241,0.9551348,0.02682995,0.017104087,0.00014942257],"about_ca_topic_score_codex":0.00001267044,"about_ca_topic_score_gemma":0.000010296499,"teacher_disagreement_score":0.0316295,"about_ca_system_score_codex":0.000037358193,"about_ca_system_score_gemma":0.000075738266,"threshold_uncertainty_score":0.68619424},"labels":[],"label_agreement":null},{"id":"W4411869717","doi":"10.1007/978-1-0716-4698-4_5","title":"Generation of Organotypic Testicular Organoids from Rat and Pig Primary Cells in Microwell Culture","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada; University of Calgary","funders":"","keywords":"Organoid; Cell biology; Biology; Primary culture; Cell culture; Genetics","score_opus":0.016281607379211433,"score_gpt":0.34436199672932166,"score_spread":0.32808038935011025,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411869717","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63868594,0.0070987446,0.3532202,0.00010051571,0.00018137442,0.00031397687,0.000019366764,0.0000055753926,0.00037431702],"genre_scores_gemma":[0.2462986,0.0014142566,0.75022095,0.00079000194,0.00007234099,0.000046931127,0.00049293897,0.000037596597,0.00062637415],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973983,0.0012144492,0.00040345392,0.0006142085,0.000071288894,0.00029825608],"domain_scores_gemma":[0.9992896,0.00007145955,0.000079656274,0.00042876508,0.00008493895,0.00004559494],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007487115,0.00020468516,0.00035881347,0.00021421642,0.000026335932,0.000011867166,0.00026742322,0.0004711389,0.00001504211],"category_scores_gemma":[0.00035145524,0.00019466812,0.00005811477,0.00038007947,0.00019221335,0.0000030739288,0.00034360526,0.00022865146,0.0000019828954],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052569536,0.00009687718,0.00801797,0.00004738266,0.000036879665,0.000015959207,0.00003963505,0.000065327644,0.9882609,0.00011136882,0.00014444366,0.0031106388],"study_design_scores_gemma":[0.0008257536,0.00014777068,0.0012035815,0.000026851756,0.000016779917,0.0000031166348,0.000021600397,0.00020211902,0.9927641,0.0009654183,0.003655141,0.00016772475],"about_ca_topic_score_codex":0.00008885399,"about_ca_topic_score_gemma":0.000052617972,"teacher_disagreement_score":0.39700076,"about_ca_system_score_codex":0.000041135172,"about_ca_system_score_gemma":0.00012854561,"threshold_uncertainty_score":0.7938335},"labels":[],"label_agreement":null},{"id":"W4411869759","doi":"10.1007/978-1-0716-4698-4","title":"Spermatogenesis","year":2025,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Faculty of Veterinary Medicine, University of Calgary; Nanjing Medical University; College of Veterinary Medicine and Biomedical Sciences, Texas A and M University; Hunter Medical Research Institute; University of Illinois at Urbana-Champaign; University of Texas at San Antonio; Washington State University; Cumming School of Medicine, University of Calgary; Texas Tech University","keywords":"Spermatogenesis; Andrology; Medicine","score_opus":0.02668460407104593,"score_gpt":0.395031913885133,"score_spread":0.36834730981408703,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4411869759","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00003600059,0.0045331228,0.53442335,0.00020805644,0.00067079614,0.00036492487,0.000008839706,0.00005739858,0.45969748],"genre_scores_gemma":[0.0000054191687,0.00019467303,0.606399,0.0017533698,0.00013615341,0.000040257764,0.00029359743,0.000039343293,0.3911382],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9983216,0.00045315633,0.00037139104,0.0005093856,0.00008206666,0.0002624235],"domain_scores_gemma":[0.9989718,0.00024144682,0.00009074038,0.0005530295,0.000076417724,0.00006654832],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005713751,0.00028626117,0.0007481341,0.0005084401,0.000019096778,0.0000050549497,0.00011984476,0.00089341035,0.00033918052],"category_scores_gemma":[0.00075046363,0.00026074427,0.00025924252,0.00017864503,0.000111092464,0.0000057479388,0.00010224913,0.00047446895,0.000044426506],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00029716874,0.00029457995,0.0061451364,0.0013846832,0.001157254,0.0027399445,0.00006440811,0.000011832503,0.47806668,0.11755904,0.02391475,0.3683645],"study_design_scores_gemma":[0.0013114995,0.0002880653,0.0004885266,0.0005235463,0.0006900688,0.0003186018,0.0000056810645,0.000099876714,0.045415994,0.050228983,0.9001434,0.00048577826],"about_ca_topic_score_codex":0.000013054928,"about_ca_topic_score_gemma":0.0000022472018,"teacher_disagreement_score":0.87622863,"about_ca_system_score_codex":0.00020245057,"about_ca_system_score_gemma":0.0005098351,"threshold_uncertainty_score":0.9999845},"labels":[],"label_agreement":null},{"id":"W4412697032","doi":"10.1007/978-1-0716-4730-1_7","title":"Quantitative Evaluation of Exon Skipping in Immortalized Muscle Cells in Vitro","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"In vitro; Cell biology; Chemistry; Biology; Genetics","score_opus":0.03291047982565127,"score_gpt":0.44208942999727263,"score_spread":0.40917895017162137,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697032","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8479519,0.0020124495,0.14793353,0.00005281358,0.00016935624,0.0003609247,0.0000057129946,0.0000032565022,0.0015100499],"genre_scores_gemma":[0.86599326,0.000098694174,0.13347934,0.00022406524,0.000005556701,0.000104775056,0.000074044096,0.000009470416,0.000010775644],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959465,0.002801923,0.00046080982,0.0004582186,0.00006403619,0.00026848403],"domain_scores_gemma":[0.9993629,0.00011595196,0.00011248008,0.0003110714,0.00007944166,0.000018190894],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0027210545,0.00015388476,0.0003480533,0.00035260065,0.000014745012,0.000002470011,0.0001933107,0.00031713682,0.000014499329],"category_scores_gemma":[0.00087738654,0.00016325116,0.00008664843,0.00044380213,0.00015820692,0.0000029653752,0.00011703291,0.0001600599,7.305032e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036495415,0.00012166967,0.0014102964,0.000023795454,0.000025581227,0.000002006223,0.00007866905,0.0014062469,0.98186487,0.0012256335,0.0000046480673,0.013471602],"study_design_scores_gemma":[0.002001567,0.00014197249,0.011004251,0.000031258987,0.000017199043,2.4517144e-7,0.00024161399,0.0027926285,0.96941155,0.01402926,0.0001754144,0.00015306295],"about_ca_topic_score_codex":0.00022445129,"about_ca_topic_score_gemma":0.00023044401,"teacher_disagreement_score":0.018041367,"about_ca_system_score_codex":0.00003400013,"about_ca_system_score_gemma":0.00014613735,"threshold_uncertainty_score":0.6657189},"labels":[],"label_agreement":null},{"id":"W4412697087","doi":"10.1007/978-1-0716-4730-1_8","title":"Direct Reprogramming of Human DMD Fibroblasts into Myotubes for In Vitro Evaluation of Antisense-Mediated Exon Skipping and Exons 45–55 Skipping Accompanied by Rescue of Dystrophin Expression","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; Reprogramming; Myogenesis; Exon; Dystrophin; Duchenne muscular dystrophy; In vitro; Cell biology; Biology; Molecular biology; Chemistry; Genetics; Gene; Alternative splicing","score_opus":0.020394356551791903,"score_gpt":0.40268860953057123,"score_spread":0.38229425297877934,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697087","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.89981246,0.0026767373,0.09678825,0.000025872252,0.000059525588,0.0005279311,0.000017127135,0.000005415195,0.00008670815],"genre_scores_gemma":[0.8907163,0.0000745488,0.108851425,0.000025811338,0.00000815241,0.000089847344,0.0002167672,0.00001302522,0.000004124538],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99694216,0.0015513747,0.00065555045,0.0005248676,0.00007740624,0.00024861787],"domain_scores_gemma":[0.9989805,0.00022379684,0.00024568388,0.00036293853,0.00015868206,0.000028404756],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021223244,0.00018375299,0.0005395144,0.00027687597,0.000043083433,0.000003221463,0.00017502102,0.00036045158,0.0000024653348],"category_scores_gemma":[0.0016752632,0.00018562407,0.00010508895,0.0002602471,0.00028521416,0.000005318381,0.0001794842,0.00011344675,3.037194e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045706247,0.00011869068,0.0014032833,0.00021115263,0.000057601912,3.8590773e-7,0.0001355497,0.00018819029,0.9839802,0.00008886436,0.000010102749,0.013348908],"study_design_scores_gemma":[0.0016488638,0.0002640287,0.001692061,0.00017272956,0.000037673653,5.389793e-7,0.00020125305,0.00074104447,0.99312735,0.0019293982,0.000044346667,0.00014072376],"about_ca_topic_score_codex":0.0001584362,"about_ca_topic_score_gemma":0.00004819984,"teacher_disagreement_score":0.013208184,"about_ca_system_score_codex":0.000018444072,"about_ca_system_score_gemma":0.00007336902,"threshold_uncertainty_score":0.756953},"labels":[],"label_agreement":null},{"id":"W4412697133","doi":"10.1007/978-1-0716-4730-1_3","title":"An Overview of Recent Advances and Clinical Applications of Exon Skipping and Splice Modulation for Muscular Dystrophy and Various Genetic Diseases","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; splice; Muscular dystrophy; Computational biology; Exon; Biology; Computer science; Bioinformatics; Alternative splicing; Medicine; Genetics; Gene","score_opus":0.03071612343677046,"score_gpt":0.4592847512687148,"score_spread":0.4285686278319444,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697133","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3498908,0.049478814,0.60022146,0.00003092099,0.000026401969,0.0003170276,0.000015642609,0.0000023198,0.000016596485],"genre_scores_gemma":[0.4961574,0.049981494,0.45337924,0.00020838984,0.000023082,0.00014479668,0.00009198924,0.000011162808,0.000002438066],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9986766,0.0004809546,0.00032426,0.00038564633,0.00002013696,0.00011241412],"domain_scores_gemma":[0.99942315,0.00011507839,0.00011786019,0.00024457852,0.00006184337,0.000037512662],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033996624,0.00010491949,0.00027363416,0.000069701295,0.000032912983,0.000002264062,0.00007980415,0.00017456044,0.0000012360931],"category_scores_gemma":[0.00020034963,0.00010239253,0.000047041205,0.000095877025,0.0002955165,0.000003312871,0.000082174105,0.000048841805,1.1341733e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015166856,0.00010881646,0.021886792,0.00027832054,0.00006317732,1.7606365e-7,0.000012808497,0.00012131614,0.63378686,0.0020627137,9.101626e-7,0.34152645],"study_design_scores_gemma":[0.006626376,0.004281041,0.5742159,0.00016536067,0.00064546533,0.000011419313,0.0003466816,0.009050698,0.1749981,0.20280524,0.025911786,0.00094196433],"about_ca_topic_score_codex":0.000011315802,"about_ca_topic_score_gemma":0.000011610705,"teacher_disagreement_score":0.55232906,"about_ca_system_score_codex":0.0000026915282,"about_ca_system_score_gemma":0.000034371446,"threshold_uncertainty_score":0.4175446},"labels":[],"label_agreement":null},{"id":"W4412697170","doi":"10.1007/978-1-0716-4730-1_5","title":"Tips to Design Effective Splice-Switching Antisense Oligonucleotides for Exon Skipping and Exon Inclusion","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; Exon; splice; Oligonucleotide; Inclusion (mineral); Alternative splicing; Computational biology; Genetics; Biology; Chemistry; DNA; Gene","score_opus":0.017270079961584802,"score_gpt":0.3961478596521891,"score_spread":0.3788777796906043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697170","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3855283,0.001252838,0.61218786,0.00014325492,0.00015465941,0.00060127827,0.0000035576654,0.000009200767,0.00011907443],"genre_scores_gemma":[0.3702568,0.00021053525,0.62756956,0.0016002445,0.000053488366,0.00019631787,0.000020041387,0.000022819913,0.000070201386],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977855,0.0008627332,0.00028982406,0.0006655497,0.000040624316,0.00035578603],"domain_scores_gemma":[0.99921834,0.00024366491,0.00006759525,0.00032331372,0.00008355761,0.00006352584],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001463408,0.00023209091,0.00032296724,0.00024567646,0.00016005737,0.00001710395,0.00022525391,0.00029100073,0.0000025583336],"category_scores_gemma":[0.0008753726,0.00022519304,0.00009276575,0.00019569414,0.000058901805,0.0000040255923,0.0008289587,0.00013026159,0.0000017942751],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027911103,0.000026289756,0.0005272188,0.000033487653,0.000052824435,0.0000058258615,0.000139445,0.00013588103,0.8777343,0.00023247984,0.00011002554,0.120723136],"study_design_scores_gemma":[0.00060916273,0.0006943376,0.0006109684,0.00009216656,0.000027806504,0.000012357127,0.00008269964,0.0008717226,0.98705083,0.005331391,0.004367873,0.00024870233],"about_ca_topic_score_codex":0.00003701036,"about_ca_topic_score_gemma":0.000024397154,"teacher_disagreement_score":0.120474435,"about_ca_system_score_codex":0.000029310775,"about_ca_system_score_gemma":0.000043764576,"threshold_uncertainty_score":0.9183105},"labels":[],"label_agreement":null},{"id":"W4412697223","doi":"10.1007/978-1-0716-4730-1_9","title":"In Vitro Multiexon Skipping by Antisense PMOs in Dystrophic Dog and Exon 7-Deleted DMD Patient","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"In vitro; Exon; Exon skipping; Medicine; Biology; Genetics; Gene; Alternative splicing","score_opus":0.010177089441823238,"score_gpt":0.38857583312816096,"score_spread":0.37839874368633775,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697223","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9443397,0.004931323,0.049478337,0.00022178203,0.00014821358,0.00055037974,0.000016838077,0.000008058315,0.00030539828],"genre_scores_gemma":[0.9201504,0.00029235176,0.07876054,0.0004695848,0.000014292063,0.000111471745,0.00006700501,0.00002408474,0.00011029446],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99629366,0.0018848208,0.0004490427,0.000732612,0.00007868628,0.00056115875],"domain_scores_gemma":[0.9992896,0.00014438505,0.000051850668,0.00039648134,0.000049723363,0.00006798422],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000919606,0.00023734143,0.00038670434,0.0004489922,0.00003210164,0.000016669203,0.00017975608,0.0004192105,0.000006737454],"category_scores_gemma":[0.0007296156,0.00024750436,0.000067693494,0.0005300393,0.00017894048,0.0000044261096,0.00039817547,0.00038459868,0.000001679643],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00020487043,0.00009110385,0.0029642223,0.000038117985,0.000021686237,0.000106853535,0.000036492453,0.000014766868,0.93738323,0.00003864281,0.000024613853,0.059075408],"study_design_scores_gemma":[0.0014409318,0.0002977787,0.0011067973,0.000038257902,0.000005446132,0.000019674935,0.000047841964,0.0010661444,0.99047744,0.00046053957,0.004796892,0.00024227872],"about_ca_topic_score_codex":0.0003098314,"about_ca_topic_score_gemma":0.00012164296,"teacher_disagreement_score":0.058833126,"about_ca_system_score_codex":0.00007106935,"about_ca_system_score_gemma":0.00007805856,"threshold_uncertainty_score":0.99999774},"labels":[],"label_agreement":null},{"id":"W4412697247","doi":"10.1007/978-1-0716-4730-1_16","title":"In Vivo Evaluation of Single- and Multi-Exon-Skipping in mdx52 Mice","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Exon skipping; In vivo; Computational biology; Exon; Computer science; Biology; Genetics; Gene; Alternative splicing","score_opus":0.036162028027129964,"score_gpt":0.42507508764692553,"score_spread":0.38891305961979555,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697247","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83732814,0.0037135396,0.1575113,0.00014099418,0.00012964713,0.0002764029,0.0000028747518,0.0000025759052,0.00089453656],"genre_scores_gemma":[0.8405648,0.00013712341,0.15861776,0.0005516676,0.000009320873,0.000064270345,0.00001732268,0.000009024705,0.0000286969],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731386,0.0016731361,0.00034113973,0.00041193675,0.000041156545,0.00021874931],"domain_scores_gemma":[0.9995434,0.000084527725,0.00007414565,0.0002238321,0.000056082754,0.000017981825],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018989592,0.00013152322,0.00025926105,0.00027146604,0.000013639978,0.0000025700201,0.00013544789,0.0003191154,0.000011368953],"category_scores_gemma":[0.0009588055,0.00014065069,0.00004293752,0.0002768212,0.00016123477,0.000003036132,0.0001376095,0.00012505293,2.0859954e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000091678114,0.00015299712,0.010121836,0.00002743614,0.000017323338,0.000001504199,0.000060053368,0.00037478088,0.9777514,0.00054965774,0.000008696986,0.010842666],"study_design_scores_gemma":[0.0028968414,0.00016269692,0.009246891,0.000048394064,0.000018242263,0.0000019045527,0.00015082139,0.002935638,0.974563,0.009252421,0.000543764,0.00017936739],"about_ca_topic_score_codex":0.00015027022,"about_ca_topic_score_gemma":0.00041840936,"teacher_disagreement_score":0.010663299,"about_ca_system_score_codex":0.000025018086,"about_ca_system_score_gemma":0.000078455654,"threshold_uncertainty_score":0.5735569},"labels":[],"label_agreement":null},{"id":"W4412697281","doi":"10.1007/978-1-0716-4730-1_4","title":"Milasen: The Emerging Era of Patient-Customized N-of-1 Antisense Oligonucleotides as Therapeutic Agents for Genetic Diseases","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Oligonucleotide; Computational biology; Computer science; Biology; Medicine; Genetics; DNA","score_opus":0.013741407260057573,"score_gpt":0.3757836670419155,"score_spread":0.36204225978185794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697281","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.76481724,0.0065905876,0.22757623,0.00016517525,0.0002625394,0.00041494594,0.000029751005,0.0000044767976,0.00013908166],"genre_scores_gemma":[0.8834989,0.0006967118,0.11452817,0.0010210143,0.000023947268,0.00009361094,0.000043262888,0.000019631334,0.000074717434],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981241,0.0007550046,0.0004607138,0.0003548095,0.00005312941,0.00025223682],"domain_scores_gemma":[0.99903756,0.00016668509,0.00017395681,0.00047130746,0.00012150308,0.000029008635],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00032383928,0.00017896017,0.00034383606,0.000103317994,0.0000443259,0.0000060741418,0.00032213665,0.0001581147,0.000012331628],"category_scores_gemma":[0.00044104896,0.00013746085,0.00024838248,0.00018490045,0.00023555371,0.0000017159934,0.00014914214,0.000093277675,7.522463e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00036880487,0.00008021672,0.0036603631,0.000042606945,0.00020022903,0.000002969292,0.000059911305,0.00022317708,0.9384416,0.0006786234,0.000090558264,0.056150958],"study_design_scores_gemma":[0.000895138,0.00043941656,0.001722855,0.000047092453,0.000097146825,0.000003646654,0.00016590713,0.00026200167,0.98738766,0.0044532306,0.004380903,0.00014502264],"about_ca_topic_score_codex":0.000047486945,"about_ca_topic_score_gemma":0.000007128122,"teacher_disagreement_score":0.118681714,"about_ca_system_score_codex":0.000008287337,"about_ca_system_score_gemma":0.00010881681,"threshold_uncertainty_score":0.56054914},"labels":[],"label_agreement":null},{"id":"W4412697310","doi":"10.1007/978-1-0716-4730-1_2","title":"Evolution and Breakthroughs in Exon Skipping and Splice Modulation: From Inception to Clinical Success","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"splice; Exon skipping; Modulation (music); Exon; Computational biology; Biology; Alternative splicing; Genetics; Physics; Gene","score_opus":0.04359721842773495,"score_gpt":0.5071278892729515,"score_spread":0.46353067084521654,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697310","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5206952,0.0011964301,0.47693995,0.00066991895,0.000059554382,0.00025721334,8.244145e-7,0.0000056020594,0.00017528307],"genre_scores_gemma":[0.67663085,0.00034798757,0.322082,0.000821429,0.000027529777,0.000036601257,0.000012098704,0.000007444438,0.000034041277],"study_design_codex":"observational","study_design_gemma":"observational","domain_scores_codex":[0.9979601,0.0010773072,0.00030441326,0.0004254857,0.000057428122,0.0001752547],"domain_scores_gemma":[0.999443,0.00023844774,0.000027214473,0.00019658265,0.00003617351,0.00005861101],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010700206,0.00009054818,0.00028263612,0.00025149618,0.000023617651,0.0000060663615,0.000055328863,0.00018619506,0.000010175773],"category_scores_gemma":[0.00064491126,0.00008830724,0.000031187614,0.00036734852,0.00012246736,0.000017393855,0.00014760529,0.0002221235,0.0000010587656],"study_design_candidate":"observational","study_design_consensus":"observational","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014612489,0.00007014895,0.5550432,0.000033682747,0.000021816106,0.000017252025,0.0000916992,0.000047793194,0.2091163,0.0015312082,0.000005924064,0.23387484],"study_design_scores_gemma":[0.0017421147,0.00018746479,0.97128356,0.00009515643,0.000021853139,0.0000074025365,0.00010529751,0.0056419,0.0041678906,0.015880618,0.00076660357,0.00010015667],"about_ca_topic_score_codex":0.0005320766,"about_ca_topic_score_gemma":0.000116546435,"teacher_disagreement_score":0.41624033,"about_ca_system_score_codex":0.000040480703,"about_ca_system_score_gemma":0.000049516464,"threshold_uncertainty_score":0.3601065},"labels":[],"label_agreement":null},{"id":"W4412697317","doi":"10.1007/978-1-0716-4730-1_15","title":"Systemic Injection of Peptide-PMOs into Humanized DMD Mice and Detection by RT-PCR and ELISA","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"PMOS logic; Peptide; Virology; Molecular biology; Chemistry; Medicine; Biology; Physics; Biochemistry","score_opus":0.006266928578050652,"score_gpt":0.33514963523274877,"score_spread":0.3288827066546981,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697317","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.614566,0.004697626,0.38019845,0.000033277927,0.000108648244,0.00016310503,0.0000029048463,0.000007004998,0.00022297818],"genre_scores_gemma":[0.9654241,0.00044040903,0.033659592,0.000289768,0.00001574131,0.00005019622,0.000038878035,0.000011479363,0.00006978767],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982373,0.00084851985,0.000284694,0.00043289043,0.000026191345,0.00017041015],"domain_scores_gemma":[0.9995459,0.00006378246,0.000100666475,0.00021150328,0.000049314014,0.000028860231],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005667233,0.00015510168,0.00027010828,0.000128271,0.000060499493,0.0000057012753,0.000098695324,0.000361168,0.0000030706854],"category_scores_gemma":[0.00030875517,0.00015663644,0.000047245194,0.00014664922,0.00024409806,0.0000030762578,0.00014006103,0.00012878967,2.7438247e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018413985,0.000028052384,0.002265478,0.000087328495,0.00005552447,4.2134616e-7,0.000052433672,0.0000095507685,0.9741367,0.00036155328,0.00003729421,0.022781521],"study_design_scores_gemma":[0.0010124113,0.00043086833,0.0011600289,0.000026138805,0.000033081473,0.00001795365,0.00020128074,0.00013880458,0.98979723,0.006041409,0.00097366766,0.00016709205],"about_ca_topic_score_codex":0.0001693278,"about_ca_topic_score_gemma":0.00007178942,"teacher_disagreement_score":0.35085815,"about_ca_system_score_codex":0.0000132219175,"about_ca_system_score_gemma":0.00002478087,"threshold_uncertainty_score":0.63874483},"labels":[],"label_agreement":null},{"id":"W4412697352","doi":"10.1007/978-1-0716-4730-1_1","title":"Progress and Future Directions in Exon Skipping and Inclusion Therapies: The Landscape of Oligonucleotide-Based Genetic Medicine","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Exon skipping; Oligonucleotide; Exon; Inclusion (mineral); Computational biology; Medicine; Biology; Genetics; Psychology; DNA; Gene","score_opus":0.009339328828635515,"score_gpt":0.3461543470013464,"score_spread":0.33681501817271087,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697352","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.90546805,0.046586167,0.04515589,0.002169654,0.00014924869,0.00021880545,0.0000024746196,0.0000044405633,0.00024524788],"genre_scores_gemma":[0.93019056,0.0052984436,0.06337522,0.00096506986,0.00007077235,0.000054204083,0.000015225367,0.0000107753785,0.000019730345],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99867404,0.00060684414,0.0002445921,0.00028865054,0.000037305774,0.00014855347],"domain_scores_gemma":[0.9995727,0.00007132,0.00006311907,0.00023289122,0.00004085891,0.000019144623],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00066797365,0.00012379505,0.00021057612,0.00017371037,0.00009008534,0.000004393948,0.00015826387,0.00017313285,0.0000049635128],"category_scores_gemma":[0.00009912921,0.000085121996,0.000030439944,0.0002330721,0.00029934754,0.0000014417657,0.0004964164,0.00011384453,4.897449e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007395975,0.000029405643,0.03066636,0.000034339002,0.000033486318,0.0000031770328,0.00043197488,0.000015552027,0.7975614,0.00026873258,0.000013490678,0.17086808],"study_design_scores_gemma":[0.004074947,0.0020922306,0.15121596,0.00046666584,0.00010711974,0.00003427204,0.0020056518,0.0023109037,0.7603712,0.014043467,0.06267335,0.0006042303],"about_ca_topic_score_codex":0.00006188948,"about_ca_topic_score_gemma":0.000093144634,"teacher_disagreement_score":0.17026386,"about_ca_system_score_codex":0.000005904076,"about_ca_system_score_gemma":0.00003340299,"threshold_uncertainty_score":0.34711742},"labels":[],"label_agreement":null},{"id":"W4412697362","doi":"10.1007/978-1-0716-4730-1_33","title":"Exon-Skipping Using Antisense Oligonucleotides for Laminin-Alpha2-Deficient Muscular Dystrophy","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Muscular dystrophy; Exon skipping; Laminin; Oligonucleotide; Exon; Molecular biology; Antisense therapy; Chemistry; Genetics; Biology; Extracellular matrix; Gene; Locked nucleic acid; Alternative splicing","score_opus":0.021791354672520892,"score_gpt":0.41181437046906605,"score_spread":0.39002301579654514,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697362","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41949132,0.0014780355,0.57780725,0.000079278776,0.00035059775,0.00032535527,0.000012828186,0.000014514636,0.00044083895],"genre_scores_gemma":[0.38338614,0.00012064712,0.6148186,0.0012539696,0.000070454524,0.00010222213,0.000110984576,0.000037827533,0.00009921406],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99727625,0.0008599577,0.0004419697,0.0008026995,0.000049748956,0.00056936307],"domain_scores_gemma":[0.99901265,0.00012616006,0.00012099405,0.0005840444,0.00009902582,0.000057149176],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009680421,0.00029980944,0.0004338193,0.00025400176,0.00013886602,0.000015908276,0.00032976634,0.0004503044,0.00000899336],"category_scores_gemma":[0.00070413307,0.00030697417,0.0002663416,0.00030746276,0.00029878557,0.0000034337602,0.00025454658,0.00017260904,0.0000014830028],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001814047,0.00009073199,0.001072326,0.000058692796,0.00011106034,0.000007115564,0.000023506038,0.0011618935,0.982557,0.0067383545,0.000048655314,0.007949269],"study_design_scores_gemma":[0.0020840634,0.000474059,0.0013450821,0.00006357092,0.00008767325,0.000013702176,0.00016960056,0.0031701734,0.96218824,0.012455413,0.017373681,0.0005747625],"about_ca_topic_score_codex":0.000039726467,"about_ca_topic_score_gemma":0.000009180654,"teacher_disagreement_score":0.037011325,"about_ca_system_score_codex":0.000029107012,"about_ca_system_score_gemma":0.00012319491,"threshold_uncertainty_score":0.99993825},"labels":[],"label_agreement":null},{"id":"W4412697365","doi":"10.1007/978-1-0716-4730-1_22","title":"In Vivo Evaluation of Multiple Exon Skipping with Peptide-PMOs in Cardiac and Skeletal Muscles in Dystrophic Dogs","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"In vivo; Medicine; Exon skipping; PMOS logic; Internal medicine; Peptide; Exon; Chemistry; Biology; Biochemistry; Genetics; Gene; Alternative splicing; Engineering","score_opus":0.014155601483201692,"score_gpt":0.36198748824551713,"score_spread":0.3478318867623154,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697365","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9755227,0.0022757945,0.021111371,0.00008575295,0.00008314098,0.0004428382,0.000005348469,0.0000028384507,0.00047021286],"genre_scores_gemma":[0.96373755,0.00017261258,0.03576775,0.00012825376,0.000010287433,0.00013774635,0.000025790252,0.000010640035,0.00000938331],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966966,0.0020908776,0.00037266925,0.00049826223,0.000064323714,0.00027729373],"domain_scores_gemma":[0.99946415,0.00011129542,0.00008294822,0.0002678853,0.00005179809,0.000021901951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001992264,0.00017360997,0.00039065717,0.00035536883,0.000015508533,0.0000032645926,0.00013060046,0.0003171316,0.0000068336185],"category_scores_gemma":[0.0006011902,0.00016793574,0.000052931166,0.00036438508,0.00021334336,0.0000052286864,0.00011891466,0.00019271404,1.4394912e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018097305,0.00007763733,0.11106322,0.00004128115,0.000024846226,0.0000044865983,0.00008447472,0.001386235,0.87946004,0.0003485774,0.0000029942692,0.007325219],"study_design_scores_gemma":[0.007482918,0.00065480673,0.29351655,0.00022432882,0.00005343496,0.0000046097894,0.00062090124,0.004323731,0.6793042,0.012684098,0.0005788682,0.00055156247],"about_ca_topic_score_codex":0.0005786342,"about_ca_topic_score_gemma":0.0015393291,"teacher_disagreement_score":0.20015587,"about_ca_system_score_codex":0.00003381336,"about_ca_system_score_gemma":0.00011658896,"threshold_uncertainty_score":0.684822},"labels":[],"label_agreement":null},{"id":"W4412697374","doi":"10.1007/978-1-0716-4730-1_27","title":"Systemic Injection of Antisense Oligos into Spinal Muscular Atrophy (SMA) Mice and Evaluation","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Spinal muscular atrophy; SMA*; Medicine; Pathology; Computer science","score_opus":0.0270314492247647,"score_gpt":0.46296791499504875,"score_spread":0.43593646577028405,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697374","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6056305,0.008004081,0.38531724,0.00013287662,0.000095968964,0.00055161386,4.813713e-7,0.00000764208,0.00025955716],"genre_scores_gemma":[0.7908915,0.00040050157,0.20842928,0.00015651675,0.000013125886,0.00006315698,0.000008621682,0.000011821336,0.000025462348],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9972337,0.0017613315,0.0003145436,0.00035693875,0.00014604647,0.00018747372],"domain_scores_gemma":[0.999359,0.00006961127,0.000063402425,0.00028562715,0.00017906162,0.000043272692],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017778822,0.00011953823,0.00035259826,0.00044793016,0.000030049738,0.000004399346,0.00007171658,0.00017310824,0.000008329605],"category_scores_gemma":[0.0007043437,0.00011111649,0.000091729125,0.00047135734,0.00017699997,0.00001047094,0.00008720401,0.00018554885,0.0000010292987],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001464502,0.00004815644,0.006430145,0.0003180304,0.00007111333,0.000016376618,0.000061905215,0.00003377781,0.8806294,0.00071109395,0.0000033593215,0.111530155],"study_design_scores_gemma":[0.0049198237,0.0018280945,0.025389666,0.00051661744,0.0004734496,0.00041673245,0.00045054665,0.008333979,0.94545156,0.011353793,0.0006046232,0.000261107],"about_ca_topic_score_codex":0.00012313666,"about_ca_topic_score_gemma":0.000006457065,"teacher_disagreement_score":0.18526098,"about_ca_system_score_codex":0.00005527611,"about_ca_system_score_gemma":0.00015456874,"threshold_uncertainty_score":0.4531199},"labels":[],"label_agreement":null},{"id":"W4412697384","doi":"10.1007/978-1-0716-4730-1_31","title":"Morpholino-Mediated Exon Skipping Targeting Human ACVR1/ALK2 for Fibrodysplasia Ossificans Progressiva","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Heterotopic Ossification and Related Conditions","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Fibrodysplasia ossificans progressiva; Morpholino; Exon; Medicine; Biology; Genetics; Anatomy; Gene; Ossification","score_opus":0.031094725748171764,"score_gpt":0.46116925970077394,"score_spread":0.4300745339526022,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697384","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.070901476,0.00066862063,0.91970116,0.0029490157,0.0004126409,0.0015058361,0.000018353636,0.00012914119,0.003713766],"genre_scores_gemma":[0.13384919,0.000029284805,0.86197805,0.0013781223,0.00008401013,0.0007852654,0.00056718744,0.00003139286,0.0012975157],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980519,0.00052335893,0.00053686555,0.0004517704,0.00005824877,0.00037785136],"domain_scores_gemma":[0.9990596,0.0002870786,0.00012044078,0.00034565007,0.000103579136,0.00008363829],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000789352,0.00017812167,0.00039247147,0.00037563028,0.00014539508,0.000016247244,0.00014851485,0.00041090825,0.00008840842],"category_scores_gemma":[0.0011075411,0.00015621271,0.0001463621,0.00043989465,0.00018102414,0.00001898907,0.000048410886,0.00038492022,0.000006539149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003041099,0.00011378961,0.003935484,0.000100472826,0.00009906093,0.000025170342,0.00010729538,0.0000071704,0.9755242,0.0086887665,0.000189993,0.011178183],"study_design_scores_gemma":[0.008152984,0.000698659,0.01595596,0.0007913704,0.00035508897,0.00005911447,0.00055745203,0.005308504,0.7940213,0.02078401,0.1525417,0.00077382976],"about_ca_topic_score_codex":0.000013355333,"about_ca_topic_score_gemma":0.000001661422,"teacher_disagreement_score":0.18150288,"about_ca_system_score_codex":0.000075598015,"about_ca_system_score_gemma":0.00011634148,"threshold_uncertainty_score":0.63701695},"labels":[],"label_agreement":null},{"id":"W4412697386","doi":"10.1007/978-1-0716-4730-1_26","title":"In Vitro Evaluation of Antisense-Mediated Exon Inclusion for Spinal Muscular Atrophy","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Spinal muscular atrophy; In vitro; Exon; Medicine; Chemistry; Biology; Pathology; Genetics; Disease; Gene","score_opus":0.051384969440664334,"score_gpt":0.5042288399559839,"score_spread":0.45284387051531955,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697386","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.51077235,0.0036197223,0.48326287,0.00066279754,0.00012404099,0.0012701985,0.0000037851198,0.000006458053,0.00027778317],"genre_scores_gemma":[0.5782598,0.00016620263,0.4206305,0.00060540217,0.000015720238,0.00021436923,0.00006432944,0.000018222212,0.000025416686],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99695885,0.0017610649,0.0003980529,0.0003733425,0.00022470458,0.00028396372],"domain_scores_gemma":[0.99916035,0.00017493295,0.000063798994,0.00032353113,0.0002378912,0.000039516424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0036679187,0.00012748236,0.000428425,0.0006552078,0.000034281693,0.0000021395383,0.00012421023,0.00020725378,0.000018851453],"category_scores_gemma":[0.0023409887,0.00011813041,0.00015102542,0.0006589982,0.00012807461,0.0000109418625,0.0002488587,0.0001899595,8.293557e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00065023423,0.00014606911,0.0008247685,0.00013101059,0.000038274065,0.000018041172,0.00004083883,0.00003203121,0.9056538,0.00034293605,0.0000066979983,0.09211534],"study_design_scores_gemma":[0.005648971,0.0004553754,0.0037632105,0.00008277833,0.000114017166,0.000006769755,0.0000418391,0.009869999,0.9671527,0.010789532,0.0019700658,0.00010475317],"about_ca_topic_score_codex":0.00006758567,"about_ca_topic_score_gemma":0.000007090332,"teacher_disagreement_score":0.09201059,"about_ca_system_score_codex":0.00008420455,"about_ca_system_score_gemma":0.00026901014,"threshold_uncertainty_score":0.48172185},"labels":[],"label_agreement":null},{"id":"W4412697393","doi":"10.1007/978-1-0716-4730-1_10","title":"Creation of DMD Muscle Cell Model Using CRISPR-Cas9 Genome Editing to Test the Efficacy of Antisense-Mediated Exon Skipping","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"CRISPR and Genetic Engineering","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"CRISPR; Genome editing; Exon skipping; Exon; Cas9; Computational biology; Biology; Genetics; Gene; Alternative splicing","score_opus":0.016620390728349314,"score_gpt":0.4091283688312372,"score_spread":0.3925079781028879,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412697393","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4146411,0.0006840942,0.58409894,0.000039359573,0.000086163534,0.00017909682,0.000010740829,0.000004584457,0.00025592404],"genre_scores_gemma":[0.6603095,0.000045481833,0.33942875,0.000106155334,0.000037048405,0.000009829008,0.000026934247,0.000015398076,0.000020908223],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859315,0.0002788103,0.00045372033,0.00034660878,0.00006109718,0.00026663978],"domain_scores_gemma":[0.99910927,0.00021121312,0.00012457147,0.0004139258,0.0001044657,0.000036584242],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00080637523,0.00016615778,0.00028540211,0.00018461814,0.000039373717,0.000005766886,0.00024241091,0.00020310708,0.0000029424275],"category_scores_gemma":[0.0012455947,0.00015106269,0.00010379246,0.00037116493,0.000082084895,0.0000016956027,0.00020524059,0.000121365556,3.1884238e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016143093,0.000059612747,0.00058496563,0.000047112375,0.00002073751,0.00000123084,0.000094737945,0.08785853,0.9088075,0.000048992704,0.000004213045,0.0024562406],"study_design_scores_gemma":[0.0004234276,0.0001279131,0.0014138178,0.00003760483,0.000033335044,0.0000020178018,0.00009255964,0.026989026,0.9702021,0.00014587383,0.00040232643,0.00013001132],"about_ca_topic_score_codex":0.000045856796,"about_ca_topic_score_gemma":0.000008414597,"teacher_disagreement_score":0.24566838,"about_ca_system_score_codex":0.000018740631,"about_ca_system_score_gemma":0.00006684022,"threshold_uncertainty_score":0.6160158},"labels":[],"label_agreement":null},{"id":"W4412761488","doi":"10.1007/978-1-0716-4658-8_11","title":"Using Photoactivatable GFP to Study Cytokinesis Dynamics in Early Development","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; Centre Hospitalier de l’Université de Montréal","funders":"","keywords":"Cytokinesis; Green fluorescent protein; Cell biology; Biology; Genetics; Cell; Cell division","score_opus":0.022299272902587177,"score_gpt":0.4330628037549036,"score_spread":0.4107635308523164,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412761488","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44451,0.000111366804,0.5546962,0.000016459959,0.000061870815,0.00045524296,0.0000027903993,0.000012801984,0.0001332694],"genre_scores_gemma":[0.16931078,0.000007716755,0.8301305,0.0002948399,0.00000769136,0.00015795327,0.000017870325,0.000024076622,0.000048544658],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769753,0.0006688891,0.00043668618,0.0006990373,0.00005561876,0.00044222223],"domain_scores_gemma":[0.9992881,0.000034515364,0.00006526436,0.0005061057,0.00005928254,0.00004677342],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00095237413,0.00024654772,0.00034079698,0.000412158,0.0000500736,0.000013736471,0.0003993272,0.00025599357,0.000003293197],"category_scores_gemma":[0.0003640334,0.00026336164,0.00004526849,0.0006987021,0.000063845415,0.0000037770599,0.00049725163,0.0001976129,8.9932263e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000866239,0.00017844739,0.09073049,0.0000074031145,0.000029588824,0.000014949012,0.000076137265,0.00009672671,0.8983034,0.00019494919,0.0000024537587,0.010278826],"study_design_scores_gemma":[0.00044865036,0.00019046833,0.005890188,0.000031143074,0.000007723533,0.000002506932,0.00017128127,0.00019291134,0.99123544,0.00083223765,0.0007392735,0.00025819085],"about_ca_topic_score_codex":0.00022484097,"about_ca_topic_score_gemma":0.00026729095,"teacher_disagreement_score":0.27543435,"about_ca_system_score_codex":0.0002764136,"about_ca_system_score_gemma":0.00013390814,"threshold_uncertainty_score":0.9999819},"labels":[],"label_agreement":null},{"id":"W4412779939","doi":"10.1007/978-1-0716-4654-0_24","title":"Correction to: Extracellular Flux Assays for the Measurement of Glycolysis and Mitochondrial Respiration in Brain Cancer Cells","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hamilton Health Sciences; Population Health Research Institute; McMaster University","funders":"","keywords":"Flux (metallurgy); Extracellular; Glycolysis; Respiration; Mitochondrion; Chemistry; Cell biology; Biology; Neuroscience; Biochemistry; Metabolism; Anatomy","score_opus":0.0313637538089315,"score_gpt":0.3477522370898238,"score_spread":0.3163884832808923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4412779939","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013301856,0.0052811787,0.98203737,0.0005144254,0.005423847,0.001531738,0.00006503882,0.000006175289,0.0050072405],"genre_scores_gemma":[0.0004046323,0.0018039385,0.75674313,0.0032735267,0.0014252027,0.0019605292,0.0005064971,0.00017211898,0.23371041],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99769163,0.0005854923,0.00061952963,0.00074226,0.0001142842,0.00024681067],"domain_scores_gemma":[0.9987029,0.00031961437,0.00024361798,0.00047799162,0.00020966923,0.00004620458],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001655721,0.00030609718,0.0005141254,0.00031104946,0.00004818743,0.000010492336,0.00021610956,0.00076576456,0.000054188225],"category_scores_gemma":[0.001145122,0.00027063605,0.00019571849,0.00010276425,0.00011966679,0.0000017043144,0.00013452244,0.0002909893,9.674643e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00061404303,0.000018812736,0.000015733774,0.000039934508,0.000093655326,0.0000022026359,0.000034031473,0.0005079576,0.9598482,0.0026122995,0.005880385,0.030332742],"study_design_scores_gemma":[0.0008093125,0.0004940227,0.0000070130473,0.00009589107,0.0000931236,0.0000025685551,0.00000981627,0.00035211834,0.61813074,0.0020376192,0.3777185,0.0002492341],"about_ca_topic_score_codex":0.00012762849,"about_ca_topic_score_gemma":0.0012694959,"teacher_disagreement_score":0.37183812,"about_ca_system_score_codex":0.00007545349,"about_ca_system_score_gemma":0.00020576183,"threshold_uncertainty_score":0.9999746},"labels":[],"label_agreement":null},{"id":"W4413050197","doi":"10.1007/978-1-0716-4566-6_15","title":"Anticancer Monotherapy and Polytherapy Drug Response Prediction Using Deep Learning: Guidelines and Best Practices","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Mila - Quebec Artificial Intelligence Institute; McGill University Health Centre","funders":"","keywords":"Best practice; Computer science; Drug response; Deep learning; Machine learning; Artificial intelligence; Data science; Drug; Medicine; Pharmacology","score_opus":0.07666394597414777,"score_gpt":0.4987566714063871,"score_spread":0.4220927254322393,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413050197","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.25596002,0.0053463494,0.73612785,0.002135612,0.0002159958,0.00013490109,7.5215473e-7,0.00003255064,0.000045991466],"genre_scores_gemma":[0.008137943,0.0006969307,0.9901852,0.0008572729,0.000023677438,0.000016406451,0.0000010328082,0.000009775471,0.00007174627],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.99348694,0.0053196587,0.00035098806,0.00055287854,0.00008283181,0.00020672775],"domain_scores_gemma":[0.9972967,0.0020804144,0.00021461613,0.0002581018,0.00011063514,0.00003953883],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0046536513,0.00015790963,0.00024868562,0.00036877906,0.0001016681,0.00009016537,0.000253911,0.00009056527,0.0000021648086],"category_scores_gemma":[0.0024218445,0.00015096291,0.00003410366,0.0005365045,0.00014767877,0.00018225805,0.00021980263,0.00021687358,2.3274069e-7],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003166094,0.000054054643,0.009274108,0.000016319696,0.000067485365,0.000015541349,0.00062947226,0.0127868205,0.48448923,0.017179493,0.000005247689,0.4751656],"study_design_scores_gemma":[0.00080417097,0.00017503664,0.004063246,0.00004998887,0.000018050516,0.000047030982,0.00012861176,0.9092508,0.024042957,0.053096406,0.008110547,0.00021317131],"about_ca_topic_score_codex":0.00015699951,"about_ca_topic_score_gemma":0.000007878427,"teacher_disagreement_score":0.896464,"about_ca_system_score_codex":0.000046325487,"about_ca_system_score_gemma":0.00011915379,"threshold_uncertainty_score":0.6156089},"labels":[],"label_agreement":null},{"id":"W4413638899","doi":"10.1007/978-1-0716-4706-6_16","title":"Ultrasound Contrast Agents in Mice: Bridging the Gap from Preclinical Research to Clinical Translation","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Ultrasound and Hyperthermia Applications","field":"Engineering","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"FujiFilm VisualSonics (Canada)","funders":"","keywords":"Bridging (networking); Contrast (vision); Preclinical research; Translation (biology); Medicine; Ultrasound; Medical physics; Radiology; Computer science; Artificial intelligence; Biology; Biochemistry","score_opus":0.18634593353563758,"score_gpt":0.5002282190050639,"score_spread":0.3138822854694263,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413638899","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.002584056,0.003696094,0.8996255,0.0008454788,0.0007376932,0.0014188469,0.00016093545,0.000094158895,0.09083723],"genre_scores_gemma":[0.021236125,0.0038330513,0.9587864,0.0018583813,0.0010919544,0.0006644704,0.00063552754,0.0002630448,0.011630992],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9964695,0.0013172651,0.0009931359,0.0006535037,0.00014436408,0.00042220778],"domain_scores_gemma":[0.9915725,0.0076354356,0.000056443972,0.0005901723,0.00006071493,0.00008476125],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.004170288,0.00028855551,0.0006473311,0.00033056503,0.000060923594,0.000034133598,0.0005941463,0.00093767396,0.00012279444],"category_scores_gemma":[0.0009140884,0.00025579322,0.00020133796,0.0002019601,0.00024367229,0.000015675958,0.00006962168,0.0019156468,0.000045227043],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001680822,0.00017906487,0.003792354,0.00010678906,0.00071539165,0.000049081464,0.0009210641,0.0022356329,0.2655825,0.06588366,0.0021824369,0.65818393],"study_design_scores_gemma":[0.0019549504,0.0001699919,0.005615759,0.00065964303,0.00019535738,0.000014255477,0.00006915234,0.0050588828,0.0042306287,0.2425108,0.7382668,0.0012537605],"about_ca_topic_score_codex":0.000110313704,"about_ca_topic_score_gemma":0.00036525328,"teacher_disagreement_score":0.7360844,"about_ca_system_score_codex":0.000104286235,"about_ca_system_score_gemma":0.00007996121,"threshold_uncertainty_score":0.99998945},"labels":[],"label_agreement":null},{"id":"W4413860676","doi":"10.1007/978-1-0716-4750-9_18","title":"ISCN and Chromoanagenesis","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hotel Dieu Hospital","funders":"","keywords":"Computer science","score_opus":0.008500076296520819,"score_gpt":0.34717529671160935,"score_spread":0.3386752204150885,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413860676","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2709266,0.0033411316,0.718803,0.0003389567,0.00017624142,0.00012985307,0.0000071092886,0.000009612155,0.006267475],"genre_scores_gemma":[0.43844044,0.00031277398,0.5584334,0.0010855246,0.00004089737,0.00005838825,0.000042128388,0.00001399072,0.0015724048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99889106,0.0003781297,0.00019122925,0.00032216604,0.000019693605,0.00019772489],"domain_scores_gemma":[0.999626,0.000025823032,0.00003338044,0.00026136165,0.000026255,0.000027194541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043052345,0.000119803495,0.00015885397,0.000111044144,0.000044470766,0.000012202455,0.00013766551,0.0001757721,0.000016869282],"category_scores_gemma":[0.00013146021,0.00011732845,0.000047323305,0.00013883089,0.00010365845,0.0000012420561,0.00019708514,0.00006412609,0.0000014395697],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000015021909,0.000020762824,0.008958242,0.000015938564,0.000044335655,0.0000033053173,0.000022082977,0.00001968334,0.9574276,0.020270064,0.00006520961,0.013137751],"study_design_scores_gemma":[0.00062263064,0.00013878949,0.0075191767,0.000012781733,0.000027621496,0.000018475288,0.00012563803,0.00008428999,0.91241693,0.015568404,0.06321445,0.00025079414],"about_ca_topic_score_codex":0.000044931512,"about_ca_topic_score_gemma":0.00002180339,"teacher_disagreement_score":0.16751385,"about_ca_system_score_codex":0.000011144009,"about_ca_system_score_gemma":0.000045902158,"threshold_uncertainty_score":0.47845152},"labels":[],"label_agreement":null},{"id":"W4413860677","doi":"10.1007/978-1-0716-4750-9_7","title":"Detection of Complex Genomic Rearrangements Using Short-Read Whole Genome Sequencing in C. elegans","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Children's Hospital; University of Calgary","funders":"","keywords":"Computational biology; Biology; Genome; Genetics; Whole genome sequencing; Gene","score_opus":0.05250958870505636,"score_gpt":0.3871582997592061,"score_spread":0.3346487110541498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4413860677","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6704755,0.0016951385,0.32700667,0.000016445656,0.00011690163,0.00019882878,0.000014213701,0.000001894581,0.00047444846],"genre_scores_gemma":[0.79276866,0.0001215064,0.206846,0.00013521644,0.000023254928,0.000022976865,0.000029446248,0.000016076163,0.000036892245],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99821347,0.0005419923,0.00044975043,0.00044251536,0.000039578194,0.00031270587],"domain_scores_gemma":[0.99946356,0.000027808284,0.000081853264,0.0003470689,0.000054263288,0.000025464491],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007741235,0.00018322417,0.00034799354,0.00025940983,0.000039494185,0.0000058583987,0.00022265864,0.00021264213,0.0000040054924],"category_scores_gemma":[0.000110025205,0.00019902132,0.000091876536,0.00027996968,0.00012839625,7.108644e-7,0.00024017003,0.00011727873,4.4192197e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004186654,0.000021912385,0.009032658,0.0000242943,0.00007520963,0.0000034343234,0.00005008245,0.0018354552,0.9822545,0.0000920099,7.151312e-7,0.00656783],"study_design_scores_gemma":[0.0005867147,0.00016567747,0.023551509,0.000020826961,0.00003133159,0.0000061620644,0.00016654107,0.0012124351,0.96742344,0.0016312943,0.004964934,0.00023915392],"about_ca_topic_score_codex":0.00029218307,"about_ca_topic_score_gemma":0.00025669808,"teacher_disagreement_score":0.12229316,"about_ca_system_score_codex":0.00011917962,"about_ca_system_score_gemma":0.00009634831,"threshold_uncertainty_score":0.81158537},"labels":[],"label_agreement":null},{"id":"W4414718748","doi":"10.1007/978-1-0716-4738-7_2","title":"DG9-Conjugated Morpholino Rescues Phenotype in Spinal Muscular Atrophy Mice","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Neurogenetic and Muscular Disorders Research","field":"Medicine","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Spinal muscular atrophy; Morpholino; SMA*; Population; Muscle atrophy; Motor neuron; Neuromuscular disease; Neuromuscular junction; Atrophy","score_opus":0.02527478960199063,"score_gpt":0.44320231891704903,"score_spread":0.4179275293150584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414718748","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63307494,0.010231669,0.35004452,0.0014914098,0.00023583788,0.0008803721,0.0000025742513,0.00004271065,0.0039959596],"genre_scores_gemma":[0.3164262,0.00077252986,0.67883545,0.0032020186,0.00004591527,0.00016652746,0.00004425068,0.000053575193,0.0004535163],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99655706,0.0016576212,0.00045492692,0.00063653477,0.00013608845,0.00055778556],"domain_scores_gemma":[0.9991065,0.00010414186,0.0000444003,0.00055831054,0.0000961152,0.000090526955],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012295094,0.00022636162,0.0005616126,0.00071356545,0.000034743545,0.000010432553,0.00026175767,0.0002988845,0.00006992254],"category_scores_gemma":[0.0009172949,0.00020969874,0.00018047765,0.0010737403,0.00025014405,0.000014040103,0.00019757361,0.0005830082,0.00001682825],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041070773,0.00018531071,0.013241779,0.00011218882,0.00008393669,0.0004081382,0.000039267077,0.000027098706,0.9258564,0.0029262514,0.00002783705,0.056681085],"study_design_scores_gemma":[0.012022934,0.0017752985,0.110796496,0.00049336744,0.00023884555,0.00010407727,0.00028190526,0.0018683046,0.7992068,0.02906691,0.043324217,0.00082087994],"about_ca_topic_score_codex":0.00037106825,"about_ca_topic_score_gemma":0.000034804783,"teacher_disagreement_score":0.32879096,"about_ca_system_score_codex":0.00007970374,"about_ca_system_score_gemma":0.00022208982,"threshold_uncertainty_score":0.8551267},"labels":[],"label_agreement":null},{"id":"W4414719674","doi":"10.1007/978-1-0716-4738-7_1","title":"DG9-Conjugated Morpholino-Based Exon 51-Skipping Therapy for Duchenne Muscular Dystrophy","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Muscle Physiology and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Muscular Dystrophy Canada; University of Alberta","funders":"","keywords":"Duchenne muscular dystrophy; Exon skipping; Dystrophin; Exon; Morpholino; Genetic enhancement; Muscular dystrophy","score_opus":0.016046445048007906,"score_gpt":0.38118113191725017,"score_spread":0.3651346868692423,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4414719674","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33110285,0.0024625412,0.66481405,0.00032853373,0.00032356888,0.0005844045,0.000017095314,0.000025355788,0.000341588],"genre_scores_gemma":[0.5108609,0.0002352112,0.48206553,0.005354521,0.00009956935,0.0006245293,0.00058318273,0.000055247536,0.000121307305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99700475,0.0010645429,0.00044388493,0.000865957,0.000047885864,0.00057299435],"domain_scores_gemma":[0.9988408,0.00014134619,0.000121731755,0.00069878495,0.00013200095,0.00006534084],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009636562,0.00034574658,0.00046058348,0.00024547408,0.00011233515,0.000015089019,0.00042297057,0.0006245309,0.000024950054],"category_scores_gemma":[0.0006002898,0.000335544,0.00031597094,0.00032818702,0.0002798551,0.0000031997902,0.00011471938,0.00022075634,0.0000023063153],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007815394,0.0001518328,0.0008176779,0.000038406604,0.00014655179,0.00000454411,0.000012068852,0.0008956989,0.9792551,0.0023219115,0.00012236081,0.015452304],"study_design_scores_gemma":[0.0039907065,0.0007094965,0.001017283,0.000025828838,0.000032276934,0.0000022954757,0.000034946384,0.001169015,0.9457926,0.010320533,0.03647868,0.0004263189],"about_ca_topic_score_codex":0.000057377947,"about_ca_topic_score_gemma":0.000013061131,"teacher_disagreement_score":0.18274856,"about_ca_system_score_codex":0.000025797759,"about_ca_system_score_gemma":0.0001785984,"threshold_uncertainty_score":0.99990964},"labels":[],"label_agreement":null},{"id":"W4415102749","doi":"10.1007/978-1-0716-4844-5_14","title":"Modeling Lysosomal Disease in Dictyostelium discoideum: Examining the Trafficking and Secretion of Lysosomal Enzymes","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Trent University","funders":"","keywords":"Dictyostelium discoideum; Dictyostelium; Function (biology); Lysosomal storage disease; Secretion; Lysosome; Gene; Mannose 6-phosphate receptor","score_opus":0.022118502092451173,"score_gpt":0.3068899372694025,"score_spread":0.2847714351769513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415102749","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.12505147,0.019351138,0.84945023,0.000115151764,0.00025443957,0.00056375936,0.000049506016,0.000013534935,0.0051507475],"genre_scores_gemma":[0.92703277,0.0038731636,0.05879194,0.00027162742,0.00023384597,0.000087209235,0.0046486896,0.00013555166,0.0049252138],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976284,0.0004564368,0.00070855155,0.0007675927,0.000117000585,0.0003220123],"domain_scores_gemma":[0.9990965,0.000085799526,0.00017782167,0.0005137947,0.000055931087,0.0000701351],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.000995171,0.00040850663,0.00056119374,0.00028972284,0.00005167698,0.000014006322,0.00028887755,0.0006831676,0.000012834298],"category_scores_gemma":[0.00014983631,0.000356013,0.00019185715,0.00007922177,0.00028119807,0.000004123626,0.00020060292,0.00043176438,2.491082e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00035647888,0.000039230246,0.003979759,0.00022316069,0.00013029939,0.00006395628,0.00018935156,0.0039152205,0.94680065,0.031227017,0.0000012640077,0.013073603],"study_design_scores_gemma":[0.015636526,0.0041415524,0.010435434,0.008393161,0.0033556484,0.00018565072,0.0013908938,0.28476268,0.42293864,0.18697251,0.050934833,0.010852458],"about_ca_topic_score_codex":0.00005617351,"about_ca_topic_score_gemma":0.00014468559,"teacher_disagreement_score":0.8019813,"about_ca_system_score_codex":0.00002712017,"about_ca_system_score_gemma":0.00014016144,"threshold_uncertainty_score":0.9998892},"labels":[],"label_agreement":null},{"id":"W4415115940","doi":"10.1007/978-1-0716-4844-5_1","title":"Determining Lysosomal Enzyme Activity Using Fluorogenic Probes","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Lysosomal Storage Disorders Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Université du Québec à Montréal; Institut National de la Recherche Scientifique","funders":"","keywords":"Enzyme; Lysosome; Enzyme assay; Mannose 6-phosphate receptor; Biological activity; Cell; Endocytosis","score_opus":0.06343147367153822,"score_gpt":0.43695008927503404,"score_spread":0.3735186156034958,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415115940","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.011096623,0.0074981577,0.823114,0.00022619344,0.0004718183,0.0018913774,0.000026041462,0.00012420722,0.15555161],"genre_scores_gemma":[0.0032333275,0.00023100362,0.9455782,0.00047646897,0.00015177409,0.000083327,0.00005454292,0.0001642008,0.05002713],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966467,0.00082576694,0.0005468053,0.0010353071,0.000253584,0.000691843],"domain_scores_gemma":[0.99828774,0.00038059283,0.00020862484,0.0008195776,0.00015407077,0.00014937758],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011382881,0.0005590591,0.0013164394,0.0009037359,0.00007664849,0.000019337707,0.00036686627,0.0013381423,0.00027662207],"category_scores_gemma":[0.0009348936,0.00054691284,0.000443717,0.00018643144,0.00028846491,0.000030234174,0.00057121454,0.0013762381,0.000014896559],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019962895,0.000076037955,0.00068052177,0.00034310552,0.00039695267,0.0010831882,0.00004634524,0.000011440294,0.7848426,0.0068174438,0.000019369252,0.20548338],"study_design_scores_gemma":[0.0047922777,0.001676941,0.00023417879,0.0021230672,0.0011387736,0.0009937751,0.000034176566,0.008861539,0.87735367,0.044272363,0.056271832,0.002247389],"about_ca_topic_score_codex":0.000067778594,"about_ca_topic_score_gemma":0.000017793072,"teacher_disagreement_score":0.20323598,"about_ca_system_score_codex":0.00043478762,"about_ca_system_score_gemma":0.000708068,"threshold_uncertainty_score":0.99995834},"labels":[],"label_agreement":null},{"id":"W4415154652","doi":"10.1007/978-1-0716-4832-2_1","title":"Introduction to the Immune System","year":2025,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Multicellular organism; Immune system; Organism; Acquired immune system; Mechanism (biology); Autoimmunity; Innate immune system; Immunity","score_opus":0.021786948050291455,"score_gpt":0.38689528750244573,"score_spread":0.36510833945215426,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415154652","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[6.072077e-8,0.72223675,0.25915202,0.00033934548,0.016039839,0.00075725873,0.0000050192507,0.000059705664,0.0014099793],"genre_scores_gemma":[3.6302237e-7,0.96449834,0.017122252,0.00018646516,0.00024807654,0.0005781363,0.00045029333,0.000035198016,0.016880885],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99075145,0.0072255684,0.0009260921,0.0006788073,0.000018310498,0.0003997657],"domain_scores_gemma":[0.9981199,0.0005638729,0.0002920099,0.00094217533,0.00006943202,0.000012629056],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0021419066,0.0004087827,0.0014879117,0.00064475613,0.00013369966,0.000017247477,0.0005813673,0.00093583454,0.00035935288],"category_scores_gemma":[0.00088761974,0.00027023387,0.00049949816,0.000776945,0.00009745814,0.000018731307,0.00028667436,0.0011005197,0.0011391614],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026707785,0.000029893716,1.9110674e-7,0.001805152,0.00027527226,0.0000029159673,0.000026189042,0.0000032756411,0.011696084,0.008869556,0.004919865,0.9723449],"study_design_scores_gemma":[0.00014035209,0.00008829255,3.7328627e-7,0.0015926823,0.00026888994,0.00014557087,0.00006124073,7.185351e-7,0.005796877,0.000021856758,0.9916538,0.00022937285],"about_ca_topic_score_codex":0.00006644247,"about_ca_topic_score_gemma":0.000003703222,"teacher_disagreement_score":0.9867339,"about_ca_system_score_codex":0.0002766346,"about_ca_system_score_gemma":0.00013658794,"threshold_uncertainty_score":0.99997497},"labels":[],"label_agreement":null},{"id":"W4415154695","doi":"10.1007/978-1-0716-4832-2_21","title":"Intact Mass Spectrometry Analysis of Immuno-Isolated Human Therapeutic Antibodies from Serum","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Antibody; In vivo; Monoclonal antibody; Mass spectrometry; Human proteins; In vitro; Peptide mapping; Tandem mass spectrometry","score_opus":0.029702585727688528,"score_gpt":0.4598787896757993,"score_spread":0.4301762039481108,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415154695","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61969215,0.004907409,0.37151545,0.000605638,0.000094745796,0.0001757555,0.000040769315,0.00001985575,0.002948249],"genre_scores_gemma":[0.6951813,0.00036322494,0.303008,0.00056470017,0.000019263287,0.000010369477,0.0001767934,0.000014183721,0.0006621456],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975188,0.0010751063,0.0005191863,0.000403504,0.00012413708,0.00035928117],"domain_scores_gemma":[0.99882686,0.00046038354,0.000099856836,0.0004681445,0.00009520939,0.000049527163],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083861075,0.00019796655,0.0009672528,0.0014655332,0.000049960392,0.000008277404,0.00025648368,0.00023234038,0.00046607462],"category_scores_gemma":[0.00016626579,0.00015758065,0.00035666168,0.0021591969,0.0002640801,0.000014289315,0.00014890012,0.00042338192,0.0000035942026],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019991797,0.00008633664,0.23421161,0.00003235446,0.003172294,0.000037982143,0.000048208323,0.0000065379686,0.75059325,0.0045699636,0.0000037595735,0.0070377896],"study_design_scores_gemma":[0.00077008037,0.00040403474,0.4512458,0.0000657039,0.0010718823,0.0000026751934,0.000092481685,0.0017050642,0.52200747,0.02174687,0.00071156066,0.00017634686],"about_ca_topic_score_codex":0.0010729142,"about_ca_topic_score_gemma":0.000042820207,"teacher_disagreement_score":0.22858578,"about_ca_system_score_codex":0.000058190042,"about_ca_system_score_gemma":0.00006476816,"threshold_uncertainty_score":0.64259523},"labels":[],"label_agreement":null},{"id":"W4415154783","doi":"10.1007/978-1-0716-4832-2_8","title":"Enrichment of Phosphorylated and Glycosylated MHC Peptides for Mass Spectrometry-Based Neoantigen Analysis","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Glycosylation; Phosphorylation; Major histocompatibility complex; MHC class I; Tandem mass spectrometry; Peptide; Phosphopeptide","score_opus":0.01644474122301992,"score_gpt":0.36972654724938303,"score_spread":0.3532818060263631,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415154783","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0020897887,0.00587795,0.97575533,0.00011622234,0.00009445299,0.0010931625,0.00022968423,0.000015326297,0.014728061],"genre_scores_gemma":[0.010121495,0.0009067666,0.9443468,0.0002497838,0.0000427958,0.00013761611,0.0018569309,0.000075396376,0.04226244],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997337,0.00037126293,0.00072252087,0.00097552815,0.00015699786,0.00043673196],"domain_scores_gemma":[0.99835116,0.00018304624,0.00032758212,0.0007310269,0.00030433587,0.000102871156],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012546445,0.00045655915,0.0009681252,0.0012335458,0.000052471754,0.000018027615,0.00036452457,0.0010355578,0.00014756367],"category_scores_gemma":[0.0004929806,0.00045693325,0.0005054768,0.0004208435,0.00027104566,0.0000016726472,0.00018804496,0.00031637654,0.0000016848289],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004138991,0.000040874314,0.00051454833,0.00013939389,0.0015136469,0.000010680872,0.0000071922173,0.00019971696,0.9822813,0.0074467617,0.00007788867,0.0073540513],"study_design_scores_gemma":[0.0016525718,0.0010108893,0.00014481657,0.000071389826,0.0006271847,0.0000024021795,0.000008050103,0.0021824413,0.92927223,0.010801256,0.0536008,0.0006259379],"about_ca_topic_score_codex":0.00004546704,"about_ca_topic_score_gemma":0.000034969802,"teacher_disagreement_score":0.05352291,"about_ca_system_score_codex":0.000055944925,"about_ca_system_score_gemma":0.00024145634,"threshold_uncertainty_score":0.9997882},"labels":[],"label_agreement":null},{"id":"W4415157048","doi":"10.1007/978-1-0716-4832-2_3","title":"Serological Proteome Analysis for Antigen Identification","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Proteome; Serology; Antigen; Immune system; Identification (biology); Antibody; Blot; Proteomics","score_opus":0.03026184364627193,"score_gpt":0.44348929340213117,"score_spread":0.41322744975585923,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415157048","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1790823,0.0004891491,0.81910574,0.0002530216,0.00013375214,0.0004996822,0.000018526089,0.000007783164,0.00041003045],"genre_scores_gemma":[0.48546723,0.00015681778,0.51216364,0.0004762925,0.00006854818,0.00051652564,0.00037441184,0.000015558997,0.0007609677],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99806225,0.0006774327,0.00033217922,0.0005532086,0.000045023015,0.0003298918],"domain_scores_gemma":[0.9992776,0.00006324727,0.000065160886,0.0004300981,0.00012329452,0.000040612424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018154354,0.00013552603,0.0002915235,0.00028140514,0.0000578278,0.000021991786,0.0003043536,0.00035663575,0.00002048692],"category_scores_gemma":[0.0008666358,0.00012225054,0.00021165941,0.0006482222,0.00012563608,0.0000015320222,0.0001423697,0.00010186968,0.0000020305488],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015142353,0.000045109427,0.010761249,0.000014191666,0.0002314832,9.911554e-7,0.0000057141788,0.00006732445,0.97479177,0.0023919404,0.000026148451,0.011512645],"study_design_scores_gemma":[0.00055481354,0.00019519529,0.020522181,0.0000031573716,0.00006505188,8.3357963e-7,0.00000859502,0.00061490206,0.94399893,0.009009793,0.024860304,0.00016623606],"about_ca_topic_score_codex":0.000018456629,"about_ca_topic_score_gemma":0.000024075873,"teacher_disagreement_score":0.3069421,"about_ca_system_score_codex":0.000017591961,"about_ca_system_score_gemma":0.00006100011,"threshold_uncertainty_score":0.49852324},"labels":[],"label_agreement":null},{"id":"W4415157117","doi":"10.1007/978-1-0716-4832-2_2","title":"Immunoproteomics: The Evolution from Classical Methods to Emerging Techniques","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Immune system; Antigen; Proteomics; In silico; Genomics; Acquired immune system; Systems biology","score_opus":0.01805300946089576,"score_gpt":0.40536085973433267,"score_spread":0.3873078502734369,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415157117","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000007221307,0.0014421744,0.8397137,0.0009421839,0.000082044615,0.0006330165,0.000098375145,0.0002183493,0.15686296],"genre_scores_gemma":[0.000007721273,0.00022707641,0.9619004,0.00051987206,0.00013563347,0.0011380657,0.00012960412,0.00007972933,0.03586186],"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.9974972,0.0003541495,0.00073847105,0.0009411578,0.00008922105,0.00037980548],"domain_scores_gemma":[0.9974626,0.00061140524,0.0003078311,0.0014606268,0.00009514662,0.00006241905],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012171807,0.0004898488,0.0006983542,0.00023843051,0.00012798556,0.000024268023,0.0010061808,0.0012338475,0.00024757563],"category_scores_gemma":[0.0003964934,0.000421593,0.000288823,0.00012914663,0.00023786088,0.00001738281,0.00076612906,0.0014742386,0.000008263004],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001591777,0.000007669376,0.00000216838,0.000012214927,0.000043817803,0.0000023388732,0.000017337983,0.0000029110624,0.57881004,0.24260968,0.000073408846,0.17840248],"study_design_scores_gemma":[0.00004046446,0.000012333142,2.711747e-7,0.00009312534,0.00003203775,0.0000017303829,0.000007120359,0.000080519014,0.36980116,0.38811728,0.24159895,0.00021498442],"about_ca_topic_score_codex":0.0001782066,"about_ca_topic_score_gemma":0.000009235398,"teacher_disagreement_score":0.24152555,"about_ca_system_score_codex":0.00051284814,"about_ca_system_score_gemma":0.00012333845,"threshold_uncertainty_score":0.9998236},"labels":[],"label_agreement":null},{"id":"W4415190603","doi":"10.1007/978-1-0716-4832-2_9","title":"Characterization of Human Leukocyte Antigen (HLA) Proteins with Integrated Immunopeptidomics and Proteomics Approach","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"vaccines and immunoinformatics approaches","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Human leukocyte antigen; Proteomics; Proteome; Antigen; Genotyping; Immunotherapy; Antigen processing; Transcriptome; Allele","score_opus":0.01527382011277997,"score_gpt":0.29392009585573836,"score_spread":0.2786462757429584,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415190603","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.058203336,0.0011241568,0.9110485,0.000019852156,0.00005947088,0.0018878867,0.000084430925,0.000015132776,0.02755724],"genre_scores_gemma":[0.002652899,0.0014186949,0.9753031,0.0001235942,0.000050649513,0.00019574643,0.004266201,0.0001117717,0.015877305],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981967,0.00020334941,0.0007091777,0.0005475545,0.000073411036,0.0002698108],"domain_scores_gemma":[0.99861073,0.000012135058,0.00052758475,0.0006478789,0.00016224595,0.0000394289],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0006426486,0.00047763909,0.00075401325,0.00027419583,0.00005864043,0.000024705136,0.00034900825,0.000872064,0.0000059883755],"category_scores_gemma":[0.000058236084,0.00040656803,0.000119803095,0.00008730314,0.00025696517,0.0000055940804,0.00034236634,0.00040642466,3.384467e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017925684,0.00003805001,0.000104761035,0.00021990671,0.000251261,0.0000015324965,0.000049363283,0.0000069148596,0.97931,0.014503052,0.000003900946,0.0053320513],"study_design_scores_gemma":[0.0012656177,0.0009911424,0.00010725127,0.00025871882,0.00008964941,0.00003172231,0.00003728959,0.00035908754,0.9839116,0.0019150017,0.010375999,0.0006569604],"about_ca_topic_score_codex":0.00002430874,"about_ca_topic_score_gemma":0.000006012415,"teacher_disagreement_score":0.06425464,"about_ca_system_score_codex":0.000031919033,"about_ca_system_score_gemma":0.00019070212,"threshold_uncertainty_score":0.9998386},"labels":[],"label_agreement":null},{"id":"W4415190942","doi":"10.1007/978-1-0716-4832-2_22","title":"Prioritization of Therapeutic Targets of Inflammation Using Proteomics, Bioinformatics, and In Silico Cell–Cell Interactomics","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Computational Drug Discovery Methods","field":"Computer Science","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"In silico; Leukocyte extravasation; Inflammation; Prioritization; Extravasation; Blood–brain barrier; Drug discovery","score_opus":0.020015158313694714,"score_gpt":0.35006216455259703,"score_spread":0.3300470062389023,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415190942","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0026808232,0.0011710599,0.9914853,0.000034393135,0.00021839539,0.0006200378,0.000011615494,0.000010724248,0.0037676445],"genre_scores_gemma":[0.0014698568,0.0001298199,0.99808645,0.000047568854,0.000009944444,0.0000062652166,0.000028605178,0.000015462307,0.00020599639],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9976262,0.00068994955,0.0010438043,0.00035745616,0.000114035436,0.00016853992],"domain_scores_gemma":[0.9980395,0.0006607015,0.0007303547,0.00038906964,0.0001561775,0.000024205177],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016110111,0.00025078995,0.000612408,0.0009324517,0.00001354342,0.000019275882,0.00044797343,0.00036160368,0.0000030595263],"category_scores_gemma":[0.00021167887,0.00027160114,0.000088786124,0.0001938893,0.000133486,0.00012856889,0.0004489941,0.0003141409,3.0078263e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006102373,0.00006482979,0.00040650615,0.001264426,0.000059861828,0.0000072020916,0.0013302525,0.026017867,0.5651665,0.25970736,0.000001324623,0.14591289],"study_design_scores_gemma":[0.0004087568,0.00007014617,0.00006687882,0.00025112196,0.000019471841,0.0000032127414,0.000012547211,0.5497248,0.23805779,0.2109927,0.00014803572,0.0002445201],"about_ca_topic_score_codex":0.00002636751,"about_ca_topic_score_gemma":0.000007896551,"teacher_disagreement_score":0.523707,"about_ca_system_score_codex":0.00011392199,"about_ca_system_score_gemma":0.00028060604,"threshold_uncertainty_score":0.9999736},"labels":[],"label_agreement":null},{"id":"W4415192839","doi":"10.1007/978-1-0716-4832-2_20","title":"Epitope Screening by Hydrogen–Deuterium Exchange Mass Spectrometry for Improved Immunotherapeutic Outcomes","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Epitope; Epitope mapping; Context (archaeology); Allosteric regulation; Antibody; Key (lock); Monoclonal antibody; Mass spectrometry","score_opus":0.020341528293323266,"score_gpt":0.34116843190469376,"score_spread":0.3208269036113705,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415192839","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000046818095,0.02584757,0.96112156,0.00038799708,0.0005994741,0.0013555957,0.00036973512,0.000034551183,0.0102367215],"genre_scores_gemma":[0.000045251778,0.0021284907,0.88275915,0.0019923316,0.00017672304,0.00041176367,0.00079975586,0.00018627424,0.11150024],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99660885,0.0005456101,0.0007471302,0.0012826811,0.00009687339,0.0007188286],"domain_scores_gemma":[0.99810535,0.00020523985,0.0003857722,0.0011158279,0.00009535471,0.00009245374],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0014715362,0.00079780724,0.0011455512,0.00036780018,0.000091212445,0.00003304638,0.0007985164,0.0017345657,0.00012608044],"category_scores_gemma":[0.0002555864,0.00079027587,0.00070243055,0.000079324214,0.00016417804,0.000003272163,0.00031665748,0.00038363494,0.000004444343],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014855833,0.000020659189,0.000012446691,0.00008006804,0.00058394915,0.0000050250856,0.0000056255753,9.1674843e-7,0.90766674,0.0035587205,0.00019446852,0.08772279],"study_design_scores_gemma":[0.0006882923,0.00043489167,0.0000013323331,0.000052924475,0.00010527923,0.0000057878106,0.000003542996,0.000026805985,0.6704716,0.020281289,0.30731618,0.00061208504],"about_ca_topic_score_codex":0.000017219829,"about_ca_topic_score_gemma":0.000005181345,"teacher_disagreement_score":0.30712172,"about_ca_system_score_codex":0.000057990674,"about_ca_system_score_gemma":0.00009923887,"threshold_uncertainty_score":0.99956137},"labels":[],"label_agreement":null},{"id":"W4415335801","doi":"10.1007/978-1-0716-5005-9_15","title":"Production and Purification of the Human SMC5/6 Core Complex from S. cerevisiae","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Rare Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Recombinant DNA; Saccharomyces cerevisiae; Affinity chromatography; Diafiltration; Tandem affinity purification; FLAG-tag; Downstream processing; Protein subunit; Chromatin","score_opus":0.03240393113613211,"score_gpt":0.3846120107245526,"score_spread":0.3522080795884205,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415335801","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9365312,0.0023359302,0.05987823,0.00034822806,0.00018230507,0.00024387508,0.000023602006,0.0000036741408,0.00045298724],"genre_scores_gemma":[0.9213102,0.00010802403,0.07808362,0.0002442152,0.000032711076,0.000020496924,0.00011066848,0.0000075991643,0.000082487146],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989931,0.00036067644,0.00020614352,0.00031244,0.000025305013,0.00010235304],"domain_scores_gemma":[0.9994338,0.000016139842,0.00008888056,0.0003966281,0.000047828613,0.000016722075],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002789833,0.000092483875,0.0001445428,0.000048177648,0.00004979447,0.0000050900576,0.00017874531,0.00012420425,0.000008996748],"category_scores_gemma":[0.0002587022,0.000072163704,0.000059507525,0.000100680205,0.00018213336,7.70414e-7,0.00015255436,0.00006354557,2.1398242e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012420673,0.00003078243,0.016234118,0.000014163254,0.00003007901,3.1824862e-7,0.000014888259,0.00001261804,0.97438914,0.003206252,0.00008081355,0.0059744054],"study_design_scores_gemma":[0.00025253042,0.000049713522,0.12238502,0.000023023484,0.000036141155,0.0000025651004,0.000050104474,0.00004157844,0.8557161,0.014204583,0.0071240044,0.000114613715],"about_ca_topic_score_codex":0.00005626892,"about_ca_topic_score_gemma":0.00002092263,"teacher_disagreement_score":0.11867302,"about_ca_system_score_codex":0.000007682677,"about_ca_system_score_gemma":0.00003316211,"threshold_uncertainty_score":0.29427505},"labels":[],"label_agreement":null},{"id":"W4415567844","doi":"10.1007/978-1-0716-4824-7_14","title":"Mouse Models for Use in Cryptosporidium Infection Studies, Quantification of Parasite Burden Using Flow Cytometry, qPCR and Histopathology, and Confocal Imaging of Oocysts","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Parasitic Infections and Diagnostics","field":"Immunology and Microbiology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; McGill University Health Centre","funders":"","keywords":"Cryptosporidium parvum; Cryptosporidium; Parasite hosting; Protozoan parasite; Monoclonal antibody; Polyclonal antibodies; Digital polymerase chain reaction; Confocal microscopy","score_opus":0.05546335408665306,"score_gpt":0.42336081701524586,"score_spread":0.3678974629285928,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415567844","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46815795,0.0032435576,0.5281575,0.000017617738,0.00019949712,0.00019160172,0.000018231662,0.000005551542,0.000008546589],"genre_scores_gemma":[0.75574964,0.0004352338,0.24368504,0.000038662925,0.0000042539846,0.0000361671,0.000031364838,0.000007641965,0.000012021335],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99825996,0.0007690327,0.00046706627,0.000298874,0.000010550296,0.00019452805],"domain_scores_gemma":[0.9984968,0.0010092964,0.00016092086,0.00017946023,0.00014449931,0.000009071951],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011205169,0.00013203433,0.0004737794,0.00059247226,0.00004753466,0.0000037212446,0.00004924389,0.00024588226,0.0000011880456],"category_scores_gemma":[0.0013267801,0.00013450813,0.00004223577,0.00026085123,0.00051127403,0.00004886558,0.00007429469,0.00014688272,1.1977153e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010694794,0.000060093313,0.10561098,0.000083823536,0.000051279476,0.000002391527,0.0001622314,0.0016691864,0.87810653,0.008875607,0.0000044840094,0.0052664327],"study_design_scores_gemma":[0.003579523,0.00028369803,0.039225664,0.00018825762,0.00021245208,0.00009151387,0.00027391428,0.038113635,0.89639,0.021016294,0.00029857387,0.00032648194],"about_ca_topic_score_codex":0.0007922715,"about_ca_topic_score_gemma":0.00006249178,"teacher_disagreement_score":0.28759167,"about_ca_system_score_codex":0.000057185804,"about_ca_system_score_gemma":0.000045972796,"threshold_uncertainty_score":0.5485082},"labels":[],"label_agreement":null},{"id":"W4415789695","doi":"10.1007/978-1-0716-4848-3_15","title":"Identifying Trypanosoma cruzi Proteins Targeted by Chagas Disease Patient Antibodies Using Yeast Surface Display","year":2025,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Trypanosoma species research and implications","field":"Medicine","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; McGill University","funders":"","keywords":"Trypanosoma cruzi; Saccharomyces cerevisiae; Chagas disease; Yeast; Antibody; Pathogen; Antigen; Sorting; Cell sorting","score_opus":0.03650011552027735,"score_gpt":0.44398609558355956,"score_spread":0.4074859800632822,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4415789695","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46755597,0.0031024716,0.5270853,0.00083527167,0.0001327195,0.0007794665,0.00008695125,0.000040916886,0.0003809236],"genre_scores_gemma":[0.41518357,0.00014471803,0.5833342,0.0005519173,0.000025074582,0.00010618654,0.00017280062,0.000032171523,0.0004493395],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997497,0.00083754305,0.00042322723,0.0005390759,0.00015465186,0.00054849003],"domain_scores_gemma":[0.9988999,0.00010728033,0.000088803274,0.0005749155,0.00011908226,0.00021005885],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000060388975,0.00022111836,0.0004172144,0.0002728583,0.00013577187,0.000031508036,0.00019901505,0.00015582357,0.00006260389],"category_scores_gemma":[0.0011776264,0.0001973665,0.00013998318,0.0006861837,0.0002766235,0.000047117694,0.00023970749,0.00033901728,0.000008081408],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012352463,0.00020883206,0.007343078,0.00009797738,0.00008320282,0.00005237581,0.000060272647,0.000015281857,0.98378706,0.002642429,0.00018610635,0.0053998884],"study_design_scores_gemma":[0.0014189293,0.00023377548,0.1765988,0.00027651677,0.00010046917,0.00002116537,0.00020137065,0.0022249704,0.80358565,0.0041158595,0.010868777,0.00035371262],"about_ca_topic_score_codex":0.00012681172,"about_ca_topic_score_gemma":0.000005955999,"teacher_disagreement_score":0.18020137,"about_ca_system_score_codex":0.00015137169,"about_ca_system_score_gemma":0.00023230325,"threshold_uncertainty_score":0.8048373},"labels":[],"label_agreement":null},{"id":"W4416257415","doi":"10.1007/978-1-0716-5013-4_17","title":"Gain-of-Functional Genomic Screening for Microproteins Essential for Tumorigenesis","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"ORFS; Open reading frame; Carcinogenesis; Genome; Cancer; Human genome; Breast cancer","score_opus":0.030317545507486828,"score_gpt":0.34640349622598293,"score_spread":0.3160859507184961,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416257415","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00015673754,0.0040969173,0.9882387,0.00007334891,0.0005986568,0.0017378373,0.00038770775,0.000011034449,0.0046990933],"genre_scores_gemma":[0.00017747069,0.0002127723,0.9576019,0.00023933013,0.00037759534,0.0006297525,0.0008925853,0.000106522384,0.039762072],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99766505,0.00025175378,0.00068020535,0.0009249395,0.0000755744,0.00040248712],"domain_scores_gemma":[0.9985248,0.000225295,0.0003882828,0.00059638504,0.00020944158,0.000055794655],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012757778,0.00045705427,0.00074597594,0.00028772384,0.00008218352,0.000011037164,0.00041692847,0.0011038563,0.000052871546],"category_scores_gemma":[0.00044738935,0.00048624133,0.0006663357,0.00003947262,0.00016273501,0.0000013626336,0.00021820831,0.00015503196,0.0000011224078],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00045873603,0.000020151978,0.000004732687,0.00016494696,0.00029228398,0.0000020017064,0.0000039931338,0.0000596261,0.9148092,0.044794627,0.00016093219,0.03922876],"study_design_scores_gemma":[0.00068108534,0.0003984709,0.0000024715832,0.0000842459,0.00012592056,0.0000060866705,0.0000033241113,0.000051423627,0.83554125,0.05143623,0.11127005,0.00039944047],"about_ca_topic_score_codex":0.00001210421,"about_ca_topic_score_gemma":0.000009667968,"teacher_disagreement_score":0.111109115,"about_ca_system_score_codex":0.000031186617,"about_ca_system_score_gemma":0.0002499127,"threshold_uncertainty_score":0.9997589},"labels":[],"label_agreement":null},{"id":"W4416536475","doi":"10.1007/978-1-0716-4976-3_3","title":"In Vitro Mouse Lymphoma Cell (L5178Y Tk+/− 3.7.2C) Forward Mutation Assay","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Carcinogens and Genotoxicity Assessment","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dow Chemical (Canada)","funders":"","keywords":"Mutant; Cell culture; Genotoxicity; Thymidine kinase; In vitro; Cloning (programming); Locus (genetics); Point mutation","score_opus":0.011694598009867826,"score_gpt":0.3375721011859915,"score_spread":0.3258775031761237,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416536475","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.008012854,0.006638868,0.82726294,0.00035347434,0.0009802415,0.001476604,0.00036524903,0.00003543265,0.15487432],"genre_scores_gemma":[0.008005761,0.0014345318,0.7224544,0.0034486556,0.00033570055,0.00029501846,0.002785142,0.00023003976,0.26101074],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9964884,0.0007994498,0.00077882514,0.0012086846,0.0001513808,0.00057327753],"domain_scores_gemma":[0.9984876,0.00011995139,0.00028928724,0.0008888767,0.00011520957,0.00009909727],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001408422,0.0006236315,0.0008262735,0.0005475959,0.00004766697,0.000025163978,0.0004720461,0.0016160909,0.000066392226],"category_scores_gemma":[0.00018637023,0.0006816343,0.00041858276,0.00011608459,0.00016674215,0.0000034140817,0.00046114906,0.00039776074,0.000012365066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001749036,0.00008676679,0.000022544853,0.00008045127,0.00009865756,0.00013989824,0.000024978905,0.000062968335,0.9708471,0.0030598766,0.00037481295,0.025027044],"study_design_scores_gemma":[0.0011648925,0.00022865368,0.000013785131,0.0000314689,0.0000593043,0.000020746185,0.000015932159,0.00011567788,0.87202233,0.0074047367,0.11831787,0.00060460734],"about_ca_topic_score_codex":0.0001073162,"about_ca_topic_score_gemma":0.0001198725,"teacher_disagreement_score":0.11794306,"about_ca_system_score_codex":0.00020423991,"about_ca_system_score_gemma":0.0003353186,"threshold_uncertainty_score":0.99968004},"labels":[],"label_agreement":null},{"id":"W4416540474","doi":"10.1007/978-1-0716-5023-3_18","title":"Applications of Chiral Supercritical Fluid Chromatography on Polysaccharide-Based Stationary Phases","year":2025,"lang":"en","type":"book-chapter","venue":"Methods in molecular biology","topic":"Analytical Chemistry and Chromatography","field":"Chemistry","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dow Chemical (Canada)","funders":"","keywords":"Supercritical fluid chromatography; Supercritical fluid; Chiral stationary phase; Stationary phase; Chiral column chromatography; High-performance liquid chromatography; Flow (mathematics); Volumetric flow rate","score_opus":0.014537141834316498,"score_gpt":0.3541109670049539,"score_spread":0.33957382517063744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4416540474","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00025727367,0.0017609284,0.56466436,0.00013976608,0.00004239505,0.00019493375,0.0006369089,0.00008345981,0.43221995],"genre_scores_gemma":[0.016810538,0.00054549176,0.9356079,0.0025509628,0.00035957657,0.0007689894,0.0040937583,0.00027224692,0.03899053],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979072,0.00009514699,0.00075907743,0.00073084433,0.00017556161,0.0003321493],"domain_scores_gemma":[0.9981131,0.0008241785,0.00009066796,0.0007535259,0.000108996624,0.00010954436],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.00024859537,0.00046050362,0.00079531403,0.00046178556,0.000050725354,0.000008991485,0.00046983192,0.0009391028,0.001806731],"category_scores_gemma":[0.00015459584,0.00047631335,0.000607736,0.00019845105,0.0007114054,0.000012244288,0.00008886922,0.0006257944,0.000004426245],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007609304,0.00022686984,0.00012991432,0.00059698825,0.00024286786,0.00003451425,0.0000051879824,0.00000621295,0.6144041,0.37880093,0.00012657102,0.005349774],"study_design_scores_gemma":[0.00061692717,0.000092622904,0.0000024804106,0.00039061086,0.0002298901,0.000006839403,0.000013006624,0.00012766104,0.8197418,0.15094925,0.02730197,0.00052696804],"about_ca_topic_score_codex":0.000009184841,"about_ca_topic_score_gemma":8.472369e-7,"teacher_disagreement_score":0.39322942,"about_ca_system_score_codex":0.00004434651,"about_ca_system_score_gemma":0.00016919218,"threshold_uncertainty_score":0.99976885},"labels":[],"label_agreement":null},{"id":"W46255350","doi":"10.1007/978-1-61779-452-0_13","title":"Astrocyte Polarization and Wound Healing in Culture: Studying Cell Adhesion Molecules","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"S100 Proteins and Annexins","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Cancer Society Research Institute; Cancer Research Institute","keywords":"Astrocyte; Wound healing; Cell biology; Cell adhesion molecule; Neuroscience; Cell adhesion; Biology; Adhesion; Cell; Chemistry; Central nervous system; Immunology; Genetics","score_opus":0.03245904069728463,"score_gpt":0.3453296565562165,"score_spread":0.3128706158589319,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W46255350","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53115255,0.002778006,0.46504527,0.000014229568,0.00006989397,0.00023813317,0.0000030322967,0.000009094978,0.00068980973],"genre_scores_gemma":[0.4901419,0.00014498466,0.5093065,0.00023519552,0.000029084238,0.000032703174,0.000037787857,0.000022861119,0.000049007172],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99800384,0.00074489036,0.00032592716,0.0005322976,0.00005188831,0.00034112952],"domain_scores_gemma":[0.9995301,0.000014645685,0.00009682422,0.00025893477,0.000036820787,0.00006269617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00072946755,0.00020685823,0.00024540626,0.00015955657,0.00005069535,0.000013708641,0.00015520952,0.0003243138,0.0000086060745],"category_scores_gemma":[0.00016017538,0.00019663891,0.000057687626,0.00019599026,0.00009219299,0.0000051457973,0.00019347534,0.00019970414,0.0000011886858],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006708553,0.000079482255,0.02363661,0.000017670658,0.000010545818,0.000015147081,0.00022460174,0.000013107401,0.9700195,0.0005143805,0.0000022837821,0.0053995503],"study_design_scores_gemma":[0.000792699,0.00049715175,0.0061183297,0.000023321727,0.000009366792,0.000011802044,0.00023803959,0.00013774849,0.9893322,0.0015667256,0.0010168982,0.00025569394],"about_ca_topic_score_codex":0.0001591212,"about_ca_topic_score_gemma":0.0000608386,"teacher_disagreement_score":0.04426121,"about_ca_system_score_codex":0.000017553084,"about_ca_system_score_gemma":0.000027847651,"threshold_uncertainty_score":0.8018702},"labels":[],"label_agreement":null},{"id":"W4887395","doi":"10.1007/978-1-62703-694-8_1","title":"Chromatin Immunoprecipitation Assay of Piwi in Drosophila","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital","funders":"National Cancer Institute","keywords":"Piwi-interacting RNA; Argonaute; Biology; Chromatin immunoprecipitation; Epigenome; Chromatin; Epigenetics; Computational biology; Genetics; Immunoprecipitation; RNA; Cell biology; Gene; RNA interference; Gene expression; DNA methylation; Promoter","score_opus":0.019278645989364893,"score_gpt":0.32437948527189575,"score_spread":0.30510083928253084,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4887395","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98962015,0.00023224513,0.007820274,0.00089187233,0.000089760804,0.00023919369,0.0000062179574,0.00001049547,0.0010898123],"genre_scores_gemma":[0.77286977,0.000014690409,0.22686347,0.00010230546,0.00002132597,0.000063789106,0.000034202687,7.2447807e-7,0.00002973443],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9984013,0.00088675384,0.0003075563,0.00019024128,0.000045814442,0.00016836243],"domain_scores_gemma":[0.99941486,0.00037740573,0.00008257263,0.00005949007,0.000042635427,0.000023057113],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006580286,0.00008308725,0.00018568904,0.000031471012,0.000019445844,0.000008154478,0.0001641399,0.000130544,0.00039396147],"category_scores_gemma":[0.00032785797,0.000037095262,0.000050130115,0.0003810128,0.000054704906,0.00002789178,0.000059013026,0.00008714125,0.000014263525],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000020561001,0.000048942533,0.008023797,0.0000020799814,0.0000033737158,6.7393745e-7,0.00006242271,0.000017133232,0.92303014,0.0018537928,0.0000023608413,0.06695323],"study_design_scores_gemma":[0.00025841757,0.00025270542,0.5942373,0.000020298443,0.0000042218117,0.00000366235,0.00010457457,0.00076716533,0.27573904,0.12786452,0.0005798797,0.00016814157],"about_ca_topic_score_codex":0.0007601738,"about_ca_topic_score_gemma":0.00020088188,"teacher_disagreement_score":0.64729106,"about_ca_system_score_codex":0.000016318287,"about_ca_system_score_gemma":0.0000061330506,"threshold_uncertainty_score":0.4313602},"labels":[],"label_agreement":null},{"id":"W49169830","doi":"10.1007/978-1-60327-569-9_22","title":"In Vitro Selection of Protein-Binding DNA Aptamers as Ligands for Biosensing Applications","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McMaster University","funders":"","keywords":"Aptamer; Systematic evolution of ligands by exponential enrichment; Nucleic acid; DNA; Computational biology; Biology; Cloning (programming); Target protein; SELEX Aptamer Technique; Biochemistry; Molecular biology; Chemistry; RNA; Gene; Computer science","score_opus":0.012508254720551023,"score_gpt":0.38866121066151416,"score_spread":0.37615295594096315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W49169830","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33578333,0.00013446255,0.66312724,0.0002179871,0.000022773187,0.000570559,0.000007632152,0.000017900495,0.000118129945],"genre_scores_gemma":[0.49442163,0.000024902338,0.50519496,0.00018326289,0.000031376996,0.000044170312,0.000051670715,0.000010367544,0.000037642778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99863833,0.00017043241,0.0003946601,0.00046164342,0.000047757858,0.00028715868],"domain_scores_gemma":[0.99942297,0.000033799384,0.00017168507,0.0002481737,0.00008853057,0.000034836507],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007691903,0.0001725898,0.00031002355,0.0002909615,0.00004030449,0.0000064757255,0.00013154418,0.00030894327,4.9889326e-7],"category_scores_gemma":[0.00027563202,0.00017033378,0.00011884199,0.0004602726,0.000103801256,0.0000034224702,0.000034735207,0.000120250246,2.5623825e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012993149,0.00006476808,0.000049576163,0.000009448695,0.000019119314,0.0000012113898,0.000008694786,0.0000057665998,0.9630522,0.00041680803,0.000003381679,0.036239076],"study_design_scores_gemma":[0.0003238259,0.00041824766,0.000018914752,0.000015634103,0.000016190257,0.000011608513,0.0000265049,0.00013575626,0.99113953,0.0059380424,0.0017725831,0.00018317255],"about_ca_topic_score_codex":0.000010862947,"about_ca_topic_score_gemma":0.0000075911626,"teacher_disagreement_score":0.1586383,"about_ca_system_score_codex":0.000034758952,"about_ca_system_score_gemma":0.000045622615,"threshold_uncertainty_score":0.69460094},"labels":[],"label_agreement":null},{"id":"W49351147","doi":"10.1007/978-1-59745-493-3_2","title":"Quantitative Peptide and Protein Profiling by Mass Spectrometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; University Health Network","funders":"","keywords":"Proteomics; Proteome; Quantitative proteomics; Mass spectrometry; Computational biology; Stable isotope labeling by amino acids in cell culture; Chemistry; Peptide; Label-free quantification; Shotgun proteomics; Chromatography; Biology; Biochemistry","score_opus":0.018796072676921072,"score_gpt":0.40586739808025424,"score_spread":0.38707132540333317,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W49351147","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.062458243,0.0006373219,0.93154377,0.000287459,0.0000040941695,0.00021465824,0.000012009849,0.0000615097,0.004780928],"genre_scores_gemma":[0.010101436,0.000041658328,0.989364,0.00012177571,0.000008753449,0.00013806664,0.00002120306,0.000012461392,0.00019059423],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991042,0.000111676425,0.00019953903,0.00033733295,0.000031361993,0.00021589316],"domain_scores_gemma":[0.99957687,0.00006687965,0.00007976962,0.00021970614,0.000019602747,0.000037149344],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00033800188,0.00012632279,0.00019066557,0.000061008952,0.000035535973,0.00000874286,0.00013402132,0.00015184247,0.00002231862],"category_scores_gemma":[0.0001794611,0.00012498567,0.000032030974,0.00015799204,0.000080601545,0.000019345465,0.000034155215,0.00026469515,9.973893e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012558947,0.000020166071,0.00014214989,0.000009046766,0.0000048279876,0.000002938372,0.000009753827,0.0000014945764,0.9235615,0.072553195,0.000005079423,0.0036772627],"study_design_scores_gemma":[0.00010655104,0.00006589812,0.0000045634497,0.000010441124,0.0000027326093,0.0000031416696,0.000025415698,0.00019443441,0.7567758,0.24191903,0.0007832263,0.00010873962],"about_ca_topic_score_codex":0.0000062100567,"about_ca_topic_score_gemma":2.554037e-7,"teacher_disagreement_score":0.16936584,"about_ca_system_score_codex":0.00003496919,"about_ca_system_score_gemma":0.000011027493,"threshold_uncertainty_score":0.50967675},"labels":[],"label_agreement":null},{"id":"W49499134","doi":"10.1007/978-1-60327-565-1_20","title":"Isolation of Monoclonal Antibody Fragments from Phage Display Libraries","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Panning (audio); Phage display; Phagemid; Monoclonal antibody; Antibody; Biology; Recombinant DNA; Peptide library; Antigen; Molecular biology; Immunoglobulin light chain; Escherichia coli; Virology; Gene; Bacteriophage; Peptide sequence; Genetics","score_opus":0.030240980737106446,"score_gpt":0.44641666257070817,"score_spread":0.4161756818336017,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W49499134","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5102795,0.0016200038,0.48505834,0.0008034666,0.00008580334,0.00016762687,0.00002827172,0.00001325599,0.0019437749],"genre_scores_gemma":[0.24597359,0.00012294807,0.7527082,0.00067240134,0.000065864595,0.0000052676387,0.00027205137,0.000009877239,0.0001698002],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983352,0.0005429323,0.00037896723,0.0003106259,0.00014703078,0.00028527417],"domain_scores_gemma":[0.9992738,0.00026158267,0.0000863421,0.0002435501,0.00004782728,0.00008692567],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00043309157,0.00015548873,0.00044521998,0.00018993398,0.000030147532,0.0000075873118,0.00015393752,0.00018630503,0.00021577894],"category_scores_gemma":[0.00023248486,0.00012418642,0.00012239847,0.0002470192,0.00016224451,0.000045412275,0.000075273434,0.0002657281,0.00000826737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0004108989,0.00015720495,0.061054412,0.000014568015,0.00005639527,0.0000681426,0.0000947487,0.0000055544183,0.9069701,0.008102459,0.000021264792,0.023044279],"study_design_scores_gemma":[0.0013728716,0.0009759312,0.23077102,0.00008276539,0.000042965974,0.00001999594,0.000031682768,0.0026727938,0.69351405,0.06779413,0.002518497,0.00020330501],"about_ca_topic_score_codex":0.00019993867,"about_ca_topic_score_gemma":0.0000019715728,"teacher_disagreement_score":0.26764986,"about_ca_system_score_codex":0.000018312177,"about_ca_system_score_gemma":0.00006051356,"threshold_uncertainty_score":0.5064176},"labels":[],"label_agreement":null},{"id":"W49992820","doi":"10.1007/978-1-62703-128-8_21","title":"Isolation and Culture of Mesenchymal Stem Cells from Mouse Compact Bone","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Mesenchymal stem cell; Chondrogenesis; Bone marrow; Cell biology; Stromal cell; Biology; Stem cell; In vitro; Population; Multipotent Stem Cell; Stem cell transplantation for articular cartilage repair; Clinical uses of mesenchymal stem cells; Adult stem cell; Immunology; Cancer research; Progenitor cell; Medicine; Endothelial stem cell; Genetics","score_opus":0.056122059873675585,"score_gpt":0.4335322557676834,"score_spread":0.3774101958940078,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W49992820","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.685624,0.00487752,0.30750307,0.000121939,0.00010790195,0.00034575877,0.000013866734,0.000014290764,0.0013916172],"genre_scores_gemma":[0.5198876,0.000110587265,0.47935772,0.00009064953,0.000053744465,0.0000058825876,0.000021344125,0.000016416485,0.00045604727],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975445,0.0013594135,0.00034167146,0.00025282436,0.0001395046,0.00036207016],"domain_scores_gemma":[0.999053,0.0003060461,0.00010042313,0.0003022334,0.0000639974,0.00017430549],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015135043,0.0001461412,0.000497565,0.00015761181,0.000019829344,0.0000045204592,0.00008150596,0.0002755641,0.00010624356],"category_scores_gemma":[0.00018971862,0.00011410197,0.000067851244,0.00021159969,0.00015161303,0.000034269346,0.00008472099,0.00030802778,0.000007436036],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000102999715,0.000085433516,0.053595938,0.000044890643,0.0000406918,0.000010874166,0.0005928254,0.0000027761225,0.9383569,0.00029082966,0.000052720185,0.0068231383],"study_design_scores_gemma":[0.0008233108,0.00026083717,0.006345292,0.00002833495,0.00003397268,0.00001861647,0.00018969692,0.00050395145,0.98932606,0.00044369514,0.001915726,0.00011049373],"about_ca_topic_score_codex":0.00023571428,"about_ca_topic_score_gemma":0.0000041160474,"teacher_disagreement_score":0.17185463,"about_ca_system_score_codex":0.000044232038,"about_ca_system_score_gemma":0.000029604991,"threshold_uncertainty_score":0.4652943},"labels":[],"label_agreement":null},{"id":"W50132028","doi":"10.1007/978-1-61779-971-6_23","title":"Embryo Culture and Epigenetics","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children's Hospital of Western Ontario; Children’s Health Research Institute; Western University","funders":"","keywords":"Reprogramming; Epigenetics; Biology; Embryo; DNA methylation; Genomic imprinting; Histone; Cell biology; Genetics; Embryonic stem cell; Embryo culture; Embryogenesis; DNA; Gene; Gene expression","score_opus":0.09705826407486202,"score_gpt":0.4925808698861597,"score_spread":0.39552260581129767,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W50132028","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000006516329,0.944783,0.052732944,0.000032348016,0.00036555761,0.0006656943,0.000011157822,0.00001885363,0.0013839444],"genre_scores_gemma":[5.524238e-7,0.67887473,0.32034546,0.00012561567,0.000121871926,0.000054181866,0.000087812026,0.000020208025,0.0003695851],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9956314,0.002787939,0.00050231337,0.00068530074,0.000036422975,0.00035663214],"domain_scores_gemma":[0.9988643,0.00015918263,0.00016276335,0.000642822,0.000061863124,0.00010909514],"candidate_categories":["research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0018434334,0.00035365837,0.0018512629,0.00015949788,0.000026621454,0.000003133525,0.00012886374,0.0013085316,0.00004655918],"category_scores_gemma":[0.0010716715,0.00023613742,0.0002507688,0.00021921795,0.00038563032,0.000007874056,0.0001607415,0.0007873717,0.00001641579],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003727948,0.000056356774,0.0002655675,0.0026982517,0.00015190977,0.000021306098,0.000032822554,4.530132e-9,0.0018437596,0.0004285803,0.000011875678,0.9944523],"study_design_scores_gemma":[0.00015480883,0.00015729763,0.00040491295,0.000473776,0.00075186597,0.00024628924,0.000003957227,3.0982966e-7,0.00030750348,0.0010759626,0.9962108,0.00021250715],"about_ca_topic_score_codex":0.000004276392,"about_ca_topic_score_gemma":4.966701e-7,"teacher_disagreement_score":0.99619895,"about_ca_system_score_codex":0.000048147165,"about_ca_system_score_gemma":0.00008790413,"threshold_uncertainty_score":0.99998796},"labels":[],"label_agreement":null},{"id":"W50521900","doi":"10.1007/978-1-59745-395-0_12","title":"Estimating Thymic Function Through Quantification of T-Cell Receptor Excision Circles","year":2007,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"T-cell and B-cell Immunology","field":"Immunology and Microbiology","cited_by":81,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal; McGill University; Centre Hospitalier de l’Université de Montréal","funders":"National Institutes of Health","keywords":"T-cell receptor; Biology; Immune system; Receptor; Immunology; Function (biology); Repertoire; Mitosis; Transplantation; T cell; Cell; Cancer research; Cell biology; Genetics; Medicine; Internal medicine","score_opus":0.07719800741457905,"score_gpt":0.41445431138209293,"score_spread":0.3372563039675139,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W50521900","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00008163784,0.54230833,0.45451164,0.0000059882423,0.002190964,0.00045776818,0.000019399733,0.00004386143,0.0003804104],"genre_scores_gemma":[0.000053126252,0.6424226,0.3560923,0.00003903041,0.00004599595,0.00008250608,0.0009085223,0.00006729765,0.00028858066],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9908758,0.005433289,0.0018772404,0.0010673241,0.00004482937,0.00070151594],"domain_scores_gemma":[0.99608177,0.0014617502,0.001340878,0.0009769163,0.00011826975,0.000020439065],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0028515998,0.0006483465,0.002471776,0.0006829934,0.000119403485,0.000009204905,0.0007178303,0.0026796246,0.00031055033],"category_scores_gemma":[0.00053889526,0.00056385325,0.0006134959,0.00072990917,0.0006136929,0.000050212515,0.00027700825,0.0012880481,0.00035758616],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003178335,0.00011985553,0.000002691773,0.001066609,0.00011831396,0.0000024203925,0.000035920017,0.000002641444,0.54545885,0.00084149855,0.000040257622,0.45227918],"study_design_scores_gemma":[0.00059701345,0.00037234795,0.0000010672603,0.0014476968,0.0003953084,0.000061742496,0.000044538483,0.0000049317787,0.25327528,0.0022662147,0.74102026,0.0005135752],"about_ca_topic_score_codex":0.000109762965,"about_ca_topic_score_gemma":0.0000044573067,"teacher_disagreement_score":0.74098,"about_ca_system_score_codex":0.000120836565,"about_ca_system_score_gemma":0.0001820481,"threshold_uncertainty_score":0.9996813},"labels":[],"label_agreement":null},{"id":"W51230829","doi":"10.1007/978-1-61779-276-2_4","title":"Identification and Relative Quantification of Native and Proteolytically Generated Protein C-Termini from Complex Proteomes: C-Terminome Analysis","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research","keywords":"Proteome; Chemistry; Cleavage (geology); Biochemistry; Trypsin; Label-free quantification; Tandem mass spectrometry; Escherichia coli; Mass spectrometry; Stable isotope labeling by amino acids in cell culture; Protease; Quantitative proteomics; Proteomics; Chromatography; Biology; Enzyme","score_opus":0.0581613788658824,"score_gpt":0.39334377118414127,"score_spread":0.33518239231825886,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W51230829","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.41038394,0.000067361885,0.5888105,0.000026457465,0.0000024898343,0.00049875374,0.000034362285,0.00002271717,0.00015342375],"genre_scores_gemma":[0.40186864,0.0000129381715,0.5973693,0.00000860392,0.000003932224,0.0006330006,0.000063180145,0.000010423538,0.000029983594],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9983757,0.00030911973,0.0005581441,0.00054804946,0.000056262394,0.00015270463],"domain_scores_gemma":[0.9989168,0.00009591276,0.00040729012,0.0004067432,0.00012652128,0.000046719826],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049014814,0.00016894576,0.0003786513,0.00019781386,0.0000496596,0.000010688848,0.0001690585,0.00022114864,0.00008892923],"category_scores_gemma":[0.0002170053,0.0001637872,0.00005322313,0.00038978187,0.0003645223,0.000057074663,0.00010247806,0.0001881912,6.5401605e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000025225716,0.000060788974,0.002660194,0.00002844966,0.0001212764,0.0000022810996,0.00042532233,0.0000018756793,0.9775542,0.014221337,1.2212166e-7,0.0048989533],"study_design_scores_gemma":[0.0001956134,0.000037996342,0.0025718333,0.00001893258,0.000097681106,0.0000019450217,0.00009352239,0.0031802864,0.9035593,0.09006545,0.00001963907,0.00015779812],"about_ca_topic_score_codex":0.00019016973,"about_ca_topic_score_gemma":0.000007436222,"teacher_disagreement_score":0.07584411,"about_ca_system_score_codex":0.000029443945,"about_ca_system_score_gemma":0.00002346038,"threshold_uncertainty_score":0.6679048},"labels":[],"label_agreement":null},{"id":"W51342837","doi":"10.1007/978-1-61779-498-8_15","title":"Analysis of Aggrecan Catabolism by Immunoblotting and Immunohistochemistry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Shriners Hospitals for Children - Canada","funders":"Canadian Institutes of Health Research","keywords":"Aggrecan; Keratan sulfate; Aggrecanase; Chondroitin sulfate; ADAMTS; Chemistry; Extracellular matrix; Cartilage; Matrix metalloproteinase; Proteolysis; Cell biology; Osteoarthritis; Biochemistry; Metalloproteinase; Glycosaminoglycan; Biology; Anatomy; Articular cartilage; Pathology; Medicine; Thrombospondin; Enzyme","score_opus":0.013223343695184863,"score_gpt":0.3384893682276674,"score_spread":0.32526602453248254,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W51342837","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6651689,0.0124218585,0.32090467,0.000009383743,0.00008960774,0.00013609766,0.000040531922,0.000008418146,0.0012205843],"genre_scores_gemma":[0.64545316,0.00035999183,0.35364217,0.00016454722,0.000021570253,0.00004586439,0.00021477714,0.000024793402,0.00007317224],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985136,0.00039283463,0.00036179586,0.0004287245,0.00004620201,0.00025685958],"domain_scores_gemma":[0.99924564,0.0000189077,0.00017459864,0.00045626384,0.000050797324,0.00005379091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00074771664,0.00017531289,0.00036946248,0.00015977779,0.000029677894,0.00000365257,0.00023169786,0.00028675378,0.000029483594],"category_scores_gemma":[0.00021429294,0.0001782419,0.00013509001,0.00031077804,0.00017374346,0.0000022603977,0.0001982726,0.00012541228,3.5058457e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004307042,0.000046433932,0.0016837083,0.000009949744,0.000303539,0.0000026216442,0.00008788214,9.048558e-7,0.99096954,0.00035077403,0.000013657122,0.0064879297],"study_design_scores_gemma":[0.00027969712,0.00013530058,0.00025084417,0.000008238016,0.00015398256,0.0000055727783,0.000044653636,0.000049779137,0.9974693,0.0007809589,0.0006360961,0.00018558938],"about_ca_topic_score_codex":0.00024063379,"about_ca_topic_score_gemma":0.0000039425063,"teacher_disagreement_score":0.032737494,"about_ca_system_score_codex":0.000010315687,"about_ca_system_score_gemma":0.000032487165,"threshold_uncertainty_score":0.7268494},"labels":[],"label_agreement":null},{"id":"W51659193","doi":"10.1007/978-1-4939-0956-8_9","title":"Pharmacogenetics of the G Protein-Coupled Receptors","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":34,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; Canada Research Chairs; University of Toronto; Lunenfeld-Tanenbaum Research Institute; University of New Brunswick","funders":"Canadian Institutes of Health Research","keywords":"G protein-coupled receptor; Pharmacogenomics; Pharmacogenetics; Biology; Receptor; Computational biology; Cannabinoid; Cannabinoid receptor; Drug; Pharmacology; Genetics; Bioinformatics; Gene; Agonist; Genotype","score_opus":0.03366837627831454,"score_gpt":0.420562522465909,"score_spread":0.38689414618759443,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W51659193","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000100732694,0.6970486,0.30120665,0.000006941133,0.0006582345,0.0008389495,0.000010910459,0.0000055635264,0.00012339646],"genre_scores_gemma":[0.000013103659,0.75593245,0.24322064,0.000074211486,0.00015875492,0.00020601809,0.00008181459,0.00008655571,0.00022641623],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.99426824,0.0035168228,0.0009553575,0.00071732805,0.000118303215,0.0004239795],"domain_scores_gemma":[0.99819714,0.000077645935,0.00065991224,0.0009169529,0.000080914644,0.000067415574],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019020691,0.00050178415,0.001462341,0.00014627221,0.00004619166,0.000009541582,0.0010059421,0.0009831882,0.00008880673],"category_scores_gemma":[0.0005445493,0.000343723,0.00086485734,0.0003644431,0.00020486476,7.7001476e-7,0.00049043074,0.0004424879,0.000003853619],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000072120033,0.000028987315,0.0000048533093,0.0012393238,0.00013612064,0.0000010254591,0.0000055471423,0.000010445903,0.5692546,0.0004208981,0.000019567091,0.42887145],"study_design_scores_gemma":[0.00018471519,0.00013679946,1.436981e-7,0.0007768185,0.00015381286,0.00001070215,0.000002804932,0.000020029842,0.25269756,0.0004523726,0.74525285,0.0003113757],"about_ca_topic_score_codex":0.0000116950405,"about_ca_topic_score_gemma":0.000002769951,"teacher_disagreement_score":0.7452333,"about_ca_system_score_codex":0.000029230987,"about_ca_system_score_gemma":0.00023365722,"threshold_uncertainty_score":0.9999015},"labels":[],"label_agreement":null},{"id":"W52640054","doi":"10.1007/978-1-59745-521-3_10","title":"Oxidative Phosphorylation: Synthesis of Mitochondrially Encoded Proteins and Assembly of Individual Structural Subunits into Functional Holoenzyme Complexes","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Montreal Neurological Institute and Hospital","funders":"","keywords":"Oxidative phosphorylation; Biogenesis; Mitochondrion; Bioenergetics; Cell biology; Biology; Phosphorylation; Biochemistry; Mitochondrial biogenesis; Protein subunit; Inner mitochondrial membrane; Chemistry; Gene","score_opus":0.023553615896633278,"score_gpt":0.33375925121171857,"score_spread":0.31020563531508527,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W52640054","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5790653,0.0006343234,0.41929096,0.00012152882,0.0002618874,0.00033167528,0.00004479319,0.000007831845,0.00024168797],"genre_scores_gemma":[0.42541698,0.000036396992,0.5740236,0.00019608212,0.00008255136,0.000033990094,0.00016492946,0.000012981566,0.000032519707],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99739665,0.0012598884,0.0005260252,0.0004711773,0.00012066347,0.00022557277],"domain_scores_gemma":[0.9989968,0.00015949264,0.0002865333,0.00031221076,0.00018237029,0.00006259896],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007023964,0.00022266779,0.00045691952,0.0001959973,0.000049605274,0.000007909172,0.00022354434,0.000386593,0.000049171882],"category_scores_gemma":[0.0011216282,0.00020995126,0.00010390768,0.00023432387,0.00031406048,0.0000063754683,0.00011527689,0.0001612202,7.7101504e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00041449766,0.000047904672,0.0013645756,0.000016170701,0.00006633572,0.000002803495,0.00012355436,0.000051510946,0.9866864,0.0031668597,0.000047289686,0.008012061],"study_design_scores_gemma":[0.0007115521,0.0009106073,0.0071214978,0.000015374484,0.000035962476,0.00002574748,0.00007382677,0.000040670533,0.98550534,0.004945107,0.00042221684,0.00019209884],"about_ca_topic_score_codex":0.00003118029,"about_ca_topic_score_gemma":0.000028205399,"teacher_disagreement_score":0.15473261,"about_ca_system_score_codex":0.000011287608,"about_ca_system_score_gemma":0.000095685034,"threshold_uncertainty_score":0.8561564},"labels":[],"label_agreement":null},{"id":"W52674165","doi":"10.1007/978-1-61779-992-1_23","title":"Antibody Development and Use in Chromogenic and Fluorescent Immunostaining","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Congenital heart defects research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development; National Institutes of Health; Wellcome Trust","keywords":"Immunostaining; Xenopus; Immunofluorescence; Antibody; Biology; Embryo; Molecular biology; Immunohistochemistry; Cell biology; Immunology; Gene; Genetics","score_opus":0.032275205038765784,"score_gpt":0.4219414716229066,"score_spread":0.38966626658414083,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W52674165","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94215643,0.010513417,0.046926957,0.000019491701,0.00006457567,0.00023328724,0.0000019685542,0.000005013395,0.000078826924],"genre_scores_gemma":[0.7246673,0.00027761512,0.2748151,0.00008751584,0.000022017872,0.000028960922,0.000053130156,0.000019006642,0.000029323293],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979861,0.0008145046,0.00024879127,0.00036429949,0.00005662882,0.00052968785],"domain_scores_gemma":[0.999513,0.000088174216,0.000030569903,0.00023595833,0.000027137075,0.00010520683],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014076333,0.00016277318,0.00021170567,0.00018029274,0.000038468705,0.00001827887,0.000096863005,0.00021281202,0.0000054572524],"category_scores_gemma":[0.0005004007,0.00016002098,0.000028379,0.00015378998,0.0001454222,0.0000065877216,0.0004492824,0.00018509469,0.0000017330814],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036599882,0.000036961577,0.16187505,0.000015242423,0.000020396801,0.000011928101,0.00014528802,6.5684105e-7,0.79993176,0.00011099576,6.655721e-7,0.03781446],"study_design_scores_gemma":[0.00073772116,0.00017447204,0.12592521,0.000021487545,0.0000057689213,0.000083995605,0.000091013346,0.000055712826,0.8630505,0.00008914146,0.00948003,0.00028490264],"about_ca_topic_score_codex":0.00005352692,"about_ca_topic_score_gemma":0.000055995773,"teacher_disagreement_score":0.22788815,"about_ca_system_score_codex":0.00002982261,"about_ca_system_score_gemma":0.000059303897,"threshold_uncertainty_score":0.65254664},"labels":[],"label_agreement":null},{"id":"W52776960","doi":"10.1007/978-1-62703-038-0_7","title":"Manual Methods for Sperm Motility Assessment","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Sperm and Testicular Function","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Achieve Life Sciences (Canada)","funders":"","keywords":"Oocyte; Cervical mucus; Motility; Sperm; Sperm motility; Andrology; Identification (biology); Biology; Medicine; Cervix; Cell biology; Embryo","score_opus":0.059097463744573815,"score_gpt":0.5271801969083495,"score_spread":0.4680827331637757,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W52776960","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.026309907,0.0010409527,0.96826524,0.00029054657,0.00092657737,0.000621914,0.0000038923527,0.000046923036,0.002494066],"genre_scores_gemma":[0.022518016,0.000012738075,0.9762157,0.00074596365,0.00018200833,0.00014037787,0.000054857755,0.000024479394,0.0001058325],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9973102,0.0015201597,0.00031836124,0.00033087656,0.00006051998,0.0004598317],"domain_scores_gemma":[0.9987179,0.0006174899,0.00006861256,0.00038710443,0.000071231996,0.00013767173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004641942,0.00017313672,0.0004303526,0.0001503337,0.00003568936,0.0000049981472,0.00007961339,0.0002517717,0.00015553812],"category_scores_gemma":[0.0017325137,0.0001448938,0.0001732707,0.00018974893,0.00009511138,0.00003020307,0.00006339352,0.00023794133,0.000005373899],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059527287,0.00025283557,0.0705727,0.00005205429,0.00006978394,0.0000052309606,0.00005875315,0.0000021487251,0.68864655,0.0113278525,0.000027582777,0.22892496],"study_design_scores_gemma":[0.0038709342,0.0012405991,0.28050533,0.000042747142,0.00047600956,0.00026995654,0.00017527399,0.0049669137,0.6077315,0.029427536,0.070807755,0.0004854336],"about_ca_topic_score_codex":0.000020664585,"about_ca_topic_score_gemma":8.5014557e-7,"teacher_disagreement_score":0.22843952,"about_ca_system_score_codex":0.00011948182,"about_ca_system_score_gemma":0.000055035864,"threshold_uncertainty_score":0.5908598},"labels":[],"label_agreement":null},{"id":"W52812077","doi":"10.1007/978-1-59745-205-2_8","title":"G Protein-Coupled Receptor Pharmacogenetics","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Receptor Mechanisms and Signaling","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Toronto General Hospital; University of Toronto","funders":"","keywords":"Pharmacogenomics; G protein-coupled receptor; Pharmacogenetics; Receptor; Biology; Computational biology; Gene; 5-HT5A receptor; Single-nucleotide polymorphism; Genetics; Pharmacology; Genotype","score_opus":0.04669006543727119,"score_gpt":0.42818064027582264,"score_spread":0.3814905748385515,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W52812077","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000040587216,0.66750723,0.33083493,0.000005516416,0.00046323272,0.0009351328,0.00002738349,0.000018696239,0.00016730161],"genre_scores_gemma":[5.8168604e-7,0.61163497,0.38689467,0.00007523536,0.00023885691,0.0003645443,0.0004145262,0.00011270367,0.0002639017],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9941321,0.0026636359,0.0010497017,0.0012727269,0.00013578376,0.0007460392],"domain_scores_gemma":[0.9983696,0.00007016589,0.00045660703,0.00084985216,0.00009082546,0.00016299821],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0009742137,0.0008159548,0.0018137543,0.00031339622,0.00008203726,0.00002092821,0.0008233375,0.0015393507,0.00022520336],"category_scores_gemma":[0.00038921135,0.0007287845,0.00086849794,0.00041462522,0.0001805986,0.0000017449925,0.00041697553,0.0006403577,0.000042166543],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011684182,0.000045441557,7.8583446e-7,0.00051881076,0.00015552207,0.000021544642,0.000006129826,0.0000041048233,0.5276525,0.00015271129,0.000072341216,0.47135845],"study_design_scores_gemma":[0.00031779893,0.00024341502,2.9481875e-8,0.00056741526,0.000089627814,0.000089549736,0.0000035193834,0.000018594192,0.13772105,0.00018659321,0.86007607,0.0006863395],"about_ca_topic_score_codex":0.000012333546,"about_ca_topic_score_gemma":0.0000016506359,"teacher_disagreement_score":0.8600037,"about_ca_system_score_codex":0.00006582632,"about_ca_system_score_gemma":0.00039393248,"threshold_uncertainty_score":0.9997569},"labels":[],"label_agreement":null},{"id":"W52848941","doi":"10.1007/978-1-62703-281-0_22","title":"Distinguishing Somatic and Germline Copy Number Events in Cancer Patient DNA Hybridized to Whole-Genome SNP Genotyping Arrays","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency","funders":"","keywords":"Copy number analysis; Genotyping; Copy-number variation; Biology; Genetics; Germline; SNP genotyping; SNP array; Genome; Germline mutation; Chromothripsis; Computational biology; Genotype; Single-nucleotide polymorphism; Mutation; DNA; Genome instability; Gene","score_opus":0.01686602367039625,"score_gpt":0.3406273287264473,"score_spread":0.32376130505605105,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W52848941","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8594951,0.00053419627,0.13884111,0.000293634,0.00015867448,0.00045219855,0.000029545561,0.000008763063,0.00018679889],"genre_scores_gemma":[0.7165396,0.000049491082,0.28230438,0.0005836413,0.00005289022,0.00028080915,0.000097807795,0.0000263095,0.000065049455],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979043,0.00060734054,0.0004866758,0.0005021774,0.00006119948,0.00043832717],"domain_scores_gemma":[0.99935883,0.00004635894,0.00012154171,0.00030200274,0.000069513284,0.0001017268],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004997803,0.0002303631,0.00033704576,0.00010077452,0.00006132053,0.000021833861,0.00019378291,0.00017408728,0.00007448792],"category_scores_gemma":[0.00033568003,0.00022545652,0.00006169548,0.00016105366,0.000053900887,0.000006203696,0.00027874758,0.00014021323,0.000012612705],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019689824,0.000047654754,0.036840245,0.0000290249,0.000033512017,0.0000045197444,0.00037508967,0.00034661184,0.9584877,0.00014316318,0.000008622884,0.0036641862],"study_design_scores_gemma":[0.0033948573,0.000669355,0.08589342,0.00022579677,0.00006860936,0.00010799029,0.0010434152,0.0011661932,0.8747843,0.015922979,0.014917284,0.0018057869],"about_ca_topic_score_codex":0.0006651912,"about_ca_topic_score_gemma":0.000118267846,"teacher_disagreement_score":0.14346328,"about_ca_system_score_codex":0.0000612863,"about_ca_system_score_gemma":0.000055729513,"threshold_uncertainty_score":0.919385},"labels":[],"label_agreement":null},{"id":"W53369239","doi":"10.1007/978-1-60327-287-2_2","title":"In Vitro Propagation of Rauwolfia serpentina Using Liquid Medium, Assessment of Genetic Fidelity of Micropropagated Plants, and Simultaneous Quantitation of Reserpine, Ajmaline, and Ajmalicine","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"Central Institute of Medicinal and Aromatic Plants","keywords":"Ajmaline; Plantlet; Murashige and Skoog medium; Shoot; Alkaloid; Botany; Reserpine; Biology; Apocynaceae; In vitro; High-performance liquid chromatography; Horticulture; Chemistry; Chromatography; Tissue culture; Biochemistry; Pharmacology","score_opus":0.01852372902271423,"score_gpt":0.3816596041313902,"score_spread":0.363135875108676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W53369239","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8609975,0.0025497056,0.13608341,0.000051437044,0.000029937697,0.0002477889,0.000028129398,0.0000012726382,0.000010821182],"genre_scores_gemma":[0.752521,0.00036806756,0.246949,0.000020954078,0.0000104891715,0.0000022524787,0.00011947116,0.0000050517524,0.0000037440943],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99842453,0.00048318322,0.00064319035,0.0002614581,0.00006746981,0.000120156656],"domain_scores_gemma":[0.9992323,0.000052093947,0.00036463415,0.00017125576,0.00015632101,0.000023395387],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00070984557,0.00012363863,0.00038909586,0.00014597022,0.000011089085,0.0000015652287,0.00008039559,0.00020941709,0.0000010860622],"category_scores_gemma":[0.00032538403,0.00010777516,0.000031934393,0.00014640782,0.00014386945,0.00000449502,0.000043057673,0.000070210604,9.098552e-9],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00042184925,0.00008755948,0.0016255045,0.0001194706,0.00002401252,0.00000562979,0.00007501768,0.0011058734,0.99460644,0.000060706046,0.0000015128675,0.0018664491],"study_design_scores_gemma":[0.00066389365,0.0008168528,0.005393413,0.000057540154,0.000021308768,0.00002633146,0.000035137426,0.0062769614,0.98647875,0.000107898035,0.000029408453,0.000092505674],"about_ca_topic_score_codex":0.00038968457,"about_ca_topic_score_gemma":0.00009927796,"teacher_disagreement_score":0.11086559,"about_ca_system_score_codex":0.000009409479,"about_ca_system_score_gemma":0.00007568349,"threshold_uncertainty_score":0.43949434},"labels":[],"label_agreement":null},{"id":"W53698150","doi":"10.1007/978-1-59745-060-7_10","title":"Isolation, Expansion, and Differentiation of Mouse Skin-Derived Precursors","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto; Université de Montréal","funders":"","keywords":"Neural crest; Embryonic stem cell; Multipotent Stem Cell; Biology; Cell biology; Adult stem cell; Stem cell; Cellular differentiation; Dermis; Cartilage; Anatomy; Pathology; Progenitor cell; Embryo; Medicine; Genetics","score_opus":0.021195446336820717,"score_gpt":0.3469963700792508,"score_spread":0.3258009237424301,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W53698150","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5765115,0.00061650574,0.4225612,0.0000338352,0.000037177622,0.00014056054,0.0000045834017,0.000004206465,0.00009042215],"genre_scores_gemma":[0.68344706,0.00075137534,0.31535286,0.00006285556,0.00002290777,0.000030543277,0.00009810881,0.000021249463,0.00021307063],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980024,0.0009511017,0.00031514792,0.00040345275,0.00008505748,0.00024283596],"domain_scores_gemma":[0.9993496,0.000050848255,0.0001075406,0.00033270108,0.00010080378,0.000058541063],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004842498,0.00014608818,0.00023683991,0.0001513598,0.000045569133,0.0000035433409,0.00016647395,0.00024902687,0.000013164625],"category_scores_gemma":[0.00035882785,0.00014007554,0.00006387721,0.0001446169,0.00023757339,0.0000031192274,0.00018199168,0.0001106465,0.0000012766756],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006153139,0.00005397754,0.014576708,0.000018332983,0.000029396568,0.0000029889848,0.000089375135,0.00004286031,0.98308736,0.00010676064,0.000022165434,0.0019085689],"study_design_scores_gemma":[0.000557579,0.00021834965,0.01125869,0.000005858877,0.0000062918307,0.000018680266,0.000026947733,0.00037393568,0.98664016,0.00039624033,0.00035886886,0.00013841268],"about_ca_topic_score_codex":0.000033397413,"about_ca_topic_score_gemma":0.000009724942,"teacher_disagreement_score":0.10720835,"about_ca_system_score_codex":0.000011189503,"about_ca_system_score_gemma":0.000047316564,"threshold_uncertainty_score":0.57121146},"labels":[],"label_agreement":null},{"id":"W54156420","doi":"10.1007/978-1-62703-317-6_11","title":"Tracking of Replicative Senescence in Mesenchymal Stem Cells by Colony-Forming Unit Frequency","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Stem Cell Network","keywords":"Mesenchymal stem cell; Senescence; Tracking (education); Cell biology; Biology; Unit (ring theory); Psychology","score_opus":0.036119328523265916,"score_gpt":0.38561754400269127,"score_spread":0.34949821547942533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W54156420","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7922594,0.0014222558,0.20431645,0.0003550564,0.00012599403,0.0007238411,0.000007967752,0.000030314512,0.0007587534],"genre_scores_gemma":[0.61312395,0.00012617264,0.3861902,0.0003184835,0.000015343763,0.0000789843,0.000011668511,0.000024387527,0.000110814784],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970411,0.0010911479,0.00070744206,0.0005513268,0.00012504861,0.00048391026],"domain_scores_gemma":[0.9985347,0.00043360627,0.00022794343,0.0005421718,0.00015140053,0.0001102091],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012401118,0.00023156691,0.00068321417,0.00031531916,0.000028083132,0.000008312855,0.00026242062,0.00030124042,0.00007330664],"category_scores_gemma":[0.00036693577,0.00020919021,0.000089416244,0.00073223526,0.0002945927,0.00008498783,0.0000809704,0.00042643244,0.000009713517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026644575,0.000101922844,0.049399696,0.00006706874,0.000018329196,0.000046887948,0.00043565765,0.0000027541766,0.8885516,0.0006335304,0.000013979937,0.060701936],"study_design_scores_gemma":[0.00073669455,0.0003447448,0.009340458,0.00014424634,0.000017918645,0.000036834554,0.000665228,0.0002653939,0.98628175,0.0016109408,0.00033888005,0.00021688864],"about_ca_topic_score_codex":0.001079822,"about_ca_topic_score_gemma":0.000032895114,"teacher_disagreement_score":0.18187377,"about_ca_system_score_codex":0.00008219383,"about_ca_system_score_gemma":0.000107564636,"threshold_uncertainty_score":0.8530529},"labels":[],"label_agreement":null},{"id":"W5424777","doi":"10.1007/978-1-59745-060-7_5","title":"Stem Cell Sources for Regenerative Medicine","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":64,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Regenerative medicine; Stem cell; Embryonic stem cell; Progenitor cell; Somatic cell; Neuroscience; Biology; Medicine; Cell biology","score_opus":0.08124665799216306,"score_gpt":0.46419274050553067,"score_spread":0.3829460825133676,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W5424777","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000009617635,0.67013234,0.32762825,0.000031011918,0.00024733102,0.0011721774,0.000055088094,0.00001080833,0.0007133559],"genre_scores_gemma":[5.725889e-7,0.80430967,0.19130206,0.00010370165,0.00031357535,0.00067729753,0.0007614753,0.00011184198,0.0024198375],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99276876,0.0039484804,0.00096507877,0.0013764284,0.00015168889,0.0007895602],"domain_scores_gemma":[0.9978734,0.00041962464,0.00043078267,0.0009773567,0.00014405597,0.00015475957],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.001531699,0.0007113257,0.002080788,0.00043567413,0.00010004807,0.000010922798,0.0009465869,0.0013637656,0.000017688011],"category_scores_gemma":[0.00026535295,0.0005588422,0.0006611703,0.00038617515,0.0004987747,0.0000016196317,0.00044813124,0.0005002808,0.000011505846],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003920017,0.00007471129,0.0000042456113,0.0030769613,0.00024763608,0.000047257785,0.00004816518,0.000009319947,0.17477143,0.00022190806,0.0014432605,0.8200159],"study_design_scores_gemma":[0.00054973905,0.00064053835,1.14487705e-7,0.00054711365,0.000105499865,0.00009349398,0.00001883196,0.000010145362,0.06473729,0.00014468825,0.93264914,0.0005034224],"about_ca_topic_score_codex":0.000016786369,"about_ca_topic_score_gemma":0.000006507562,"teacher_disagreement_score":0.93120587,"about_ca_system_score_codex":0.00007755406,"about_ca_system_score_gemma":0.000378519,"threshold_uncertainty_score":0.99993265},"labels":[],"label_agreement":null},{"id":"W55750939","doi":"10.1007/978-1-4899-7708-3_7","title":"In Situ Analysis of DNA Methylation in Plants","year":2016,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":1,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Lethbridge; Agriculture and Agri-Food Canada","funders":"","keywords":"DNA methylation; Epigenetics; Biology; Chromatin; Methylation; Epigenomics; DNA; Illumina Methylation Assay; RNA-Directed DNA Methylation; Molecular biology; Computational biology; Genetics; Gene; Gene expression","score_opus":0.04460092241103003,"score_gpt":0.39404952193483045,"score_spread":0.3494485995238004,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W55750939","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9853405,0.00024144149,0.0131723955,0.00065391854,0.00004222076,0.00015921908,0.000037308368,0.0000069775638,0.00034604143],"genre_scores_gemma":[0.9781573,0.00009786144,0.021488465,0.00013240043,0.000009569534,0.000025568246,0.000061761486,9.850777e-7,0.000026106314],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99599445,0.0027156752,0.00042070824,0.0004130976,0.0000838037,0.0003722439],"domain_scores_gemma":[0.9986206,0.0011166623,0.00009612265,0.000101806836,0.000025200705,0.000039550836],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0024222317,0.00012445287,0.00047229542,0.00036990564,0.000011296965,0.0000031783352,0.00031879838,0.0002944725,0.00010860401],"category_scores_gemma":[0.0006696528,0.00004699128,0.00010628411,0.0016223963,0.00012617839,0.000031589803,0.00012155495,0.00013994443,0.000004583387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000046887664,0.00004811547,0.10582337,0.0000012234902,0.00004208189,0.00003620626,0.000019271645,0.000008100297,0.8477517,0.00040507957,0.0000015182757,0.04581648],"study_design_scores_gemma":[0.00026727107,0.00012059382,0.34664539,0.000013626042,0.000014237782,0.0000027002072,0.00002036148,0.00007912645,0.6477189,0.004656163,0.00033567465,0.00012596321],"about_ca_topic_score_codex":0.00034994725,"about_ca_topic_score_gemma":0.00458556,"teacher_disagreement_score":0.24082203,"about_ca_system_score_codex":0.00004629569,"about_ca_system_score_gemma":0.000010865792,"threshold_uncertainty_score":0.255885},"labels":[],"label_agreement":null},{"id":"W55774633","doi":"10.1007/978-1-61779-095-9_6","title":"Manufacturing of Adenovirus Vectors: Production and Purification of Helper Dependent Adenovirus","year":2011,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Vector (molecular biology); Viral vector; Helper virus; Virology; Genetic enhancement; Virus; Biology; Computer science; Gene; Recombinant DNA; Viral replication","score_opus":0.07094535777041376,"score_gpt":0.4264396149618882,"score_spread":0.3554942571914744,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W55774633","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0071854237,0.9741795,0.017383438,0.0000068753493,0.00020955225,0.0009013339,0.000036531572,0.000007641969,0.00008970623],"genre_scores_gemma":[0.0007158273,0.94612426,0.052612294,0.000012722259,0.00009315173,0.000165285,0.00012261923,0.00007578728,0.00007808158],"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99523246,0.0025044489,0.00088773685,0.00088631525,0.00012432048,0.00036470793],"domain_scores_gemma":[0.9982627,0.0000635396,0.0005693805,0.00093355344,0.00010061953,0.00007017635],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0019700457,0.0004122329,0.0011944821,0.00047562152,0.000027794411,0.0000061538576,0.0004926333,0.0008289601,0.000029857396],"category_scores_gemma":[0.00048232637,0.00037190894,0.00026355902,0.00021621307,0.0003359356,0.0000035978405,0.0002911448,0.00038316424,0.0000027538765],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017650874,0.00007119342,0.00001979818,0.0017343434,0.00018165303,0.0000023598243,0.000028715716,0.0000026501962,0.4815556,0.000046633053,0.000003151213,0.51617736],"study_design_scores_gemma":[0.00019815924,0.0011117976,0.000011428548,0.0005643189,0.00014864169,0.00003977719,0.000012104633,6.3209063e-7,0.92652935,0.00024456112,0.07081842,0.00032080765],"about_ca_topic_score_codex":0.00005666304,"about_ca_topic_score_gemma":0.00004463372,"teacher_disagreement_score":0.51585656,"about_ca_system_score_codex":0.00004389962,"about_ca_system_score_gemma":0.00020429002,"threshold_uncertainty_score":0.9998733},"labels":[],"label_agreement":null},{"id":"W56166983","doi":"10.1007/978-1-60761-362-6_27","title":"Use of Inbred Mouse Strains to Map Recognition Receptors of MCMV Infected Cells in the NK Cell Gene Locus","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"","keywords":"Biology; Major histocompatibility complex; Gene; Locus (genetics); Receptor; Genetics; Inbred strain; Innate immune system; Virology","score_opus":0.03184348803518064,"score_gpt":0.3227108852732375,"score_spread":0.2908673972380569,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W56166983","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85373735,0.00037995368,0.14306031,0.00020306754,0.0016982391,0.0005321946,0.000016782587,0.000021681999,0.00035044475],"genre_scores_gemma":[0.7765343,0.0002867535,0.21878444,0.002355257,0.00002460381,0.000056526125,0.0005786224,0.00003426229,0.0013452371],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99580044,0.0030742483,0.0005768869,0.0002669691,0.000023948009,0.00025752935],"domain_scores_gemma":[0.9990692,0.00028917202,0.00021081376,0.00032059767,0.00009786967,0.000012329152],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008355863,0.00016363952,0.00035347926,0.00042351248,0.000025050937,0.000004726017,0.00019279264,0.00037927713,0.00026337052],"category_scores_gemma":[0.0003515116,0.00013416528,0.00010381407,0.00040442133,0.000107654414,0.000044608285,0.000036967678,0.000374184,0.000040431252],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00021259676,0.00028430772,0.00012811688,0.000010503875,0.000022874907,0.0000021237981,0.00050464395,0.0000787405,0.9803407,0.000066280234,0.00048033724,0.017868772],"study_design_scores_gemma":[0.0006548765,0.0007705933,0.0006609238,0.000019265888,0.00001652189,0.0000071016443,0.00017664257,0.000006878762,0.987478,0.0002956343,0.009783882,0.00012963604],"about_ca_topic_score_codex":0.00022862056,"about_ca_topic_score_gemma":0.00002131024,"teacher_disagreement_score":0.07720302,"about_ca_system_score_codex":0.000038691738,"about_ca_system_score_gemma":0.000028126185,"threshold_uncertainty_score":0.54711014},"labels":[],"label_agreement":null},{"id":"W5622989","doi":"10.1007/978-1-60761-362-6_7","title":"Natural Killer Cell Conjugate Assay Using Two-Color Flow Cytometry","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Immune Cell Function and Interaction","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Flow cytometry; Cytometry; Conjugate; Cell; Chemistry; Molecular biology; Cell biology; Biology; Biochemistry; Mathematics","score_opus":0.01681531744967688,"score_gpt":0.3614765156047048,"score_spread":0.3446611981550279,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W5622989","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.091193065,0.005115559,0.88371426,0.00032539648,0.013984518,0.00032971692,0.0000020790392,0.00010761354,0.0052278074],"genre_scores_gemma":[0.49904138,0.000057914163,0.49098498,0.0038668094,0.00006265688,0.000015672298,0.00016626298,0.000033830343,0.005770486],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99593043,0.0026387628,0.00044632706,0.00045791842,0.000023306651,0.0005032504],"domain_scores_gemma":[0.99916613,0.0002572873,0.00015491768,0.00033475953,0.00006528956,0.000021610722],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012394328,0.0002597512,0.00042981078,0.00040592166,0.00011119341,0.000014725819,0.00022586838,0.00044290847,0.00074657495],"category_scores_gemma":[0.00032677728,0.00023379386,0.00017002149,0.00035064566,0.00014439845,0.00006659045,0.000072291674,0.0007522309,0.00020429997],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017972573,0.000102549566,0.0001777095,0.0000037972907,0.000046569192,0.000013940361,0.00006670112,0.00013886663,0.98380536,0.00067081524,0.00032403602,0.014469902],"study_design_scores_gemma":[0.0018074273,0.0003036182,0.00034957076,0.000014422097,0.000034353212,0.0001262097,0.00006574641,0.0018411346,0.95219976,0.00089781557,0.042043887,0.0003160685],"about_ca_topic_score_codex":0.00005264556,"about_ca_topic_score_gemma":0.0000025005002,"teacher_disagreement_score":0.40784833,"about_ca_system_score_codex":0.000111352514,"about_ca_system_score_gemma":0.000040856692,"threshold_uncertainty_score":0.95338374},"labels":[],"label_agreement":null},{"id":"W586114392","doi":"10.1007/978-1-4939-2694-7_8","title":"Solubilization of Proteins: The Importance of Lysis Buffer Choice","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Skin and Cellular Biology Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":59,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Saskatchewan; St. John’s Health Sciences Centre","funders":"Canadian Institutes of Health Research","keywords":"Lysis; Lysis buffer; Solubilization; Buffer (optical fiber); Chemistry; Thiourea; Extraction (chemistry); Biochemistry; Chromatography; Cell biology; Biology; Computer science","score_opus":0.044852309230366545,"score_gpt":0.4193548412243056,"score_spread":0.37450253199393907,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W586114392","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.57011133,0.0043180464,0.4241488,0.00015739356,0.00009623432,0.00037034682,0.000006429201,0.000004254313,0.00078719005],"genre_scores_gemma":[0.76656246,0.00020604185,0.23236524,0.00025816888,0.000087362474,0.00013680298,0.00013909109,0.00003241525,0.0002124071],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99731255,0.0015795568,0.00040633438,0.00034623075,0.00010050088,0.00025483812],"domain_scores_gemma":[0.9988434,0.00008669558,0.00018384603,0.0006229568,0.00021212103,0.000050986942],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023512386,0.00013649692,0.000281404,0.00008853942,0.000020283675,0.0000029402217,0.00042862838,0.00029596727,0.000015397758],"category_scores_gemma":[0.0021671853,0.000097879056,0.0001127023,0.00031715457,0.00044134547,0.0000017667898,0.00023718007,0.00013624036,0.0000011044615],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000066216824,0.00006170738,0.071586266,0.000015568014,0.00005393232,0.0000025964305,0.000041642328,0.00004800818,0.9236073,0.0010090241,0.00003928061,0.0034684567],"study_design_scores_gemma":[0.00053764903,0.00040090887,0.0016692104,0.000008151635,0.000015639727,0.000013764521,0.00007593586,0.00014341802,0.99111414,0.002862337,0.0030436781,0.00011514876],"about_ca_topic_score_codex":0.000053925854,"about_ca_topic_score_gemma":0.000047561265,"teacher_disagreement_score":0.19645116,"about_ca_system_score_codex":0.00001280563,"about_ca_system_score_gemma":0.00012989237,"threshold_uncertainty_score":0.39913923},"labels":[],"label_agreement":null},{"id":"W58822501","doi":"10.1007/978-1-4939-0888-2_24","title":"Analyzing RB and E2F During the G1–S Transition","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related Molecular Pathways","field":"Medicine","cited_by":12,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Children’s Health Research Institute; Occupational Cancer Research Centre; Western University; Cancer Care Ontario","funders":"","keywords":"E2F; Retinoblastoma protein; Regulator; Transcription factor; Cyclin-dependent kinase; Transcription (linguistics); Cell biology; Restriction point; Cancer research; E2F1; Cell cycle; Biology; Gene; Genetics","score_opus":0.013215425203349911,"score_gpt":0.35694788129666133,"score_spread":0.34373245609331143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W58822501","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29442087,0.0012240589,0.70248264,0.00085478375,0.00010462604,0.00019416318,0.0000012303485,0.000027926415,0.00068967283],"genre_scores_gemma":[0.59884864,0.00013801242,0.39986712,0.0009413818,0.000086505184,0.000038930306,0.000012796771,0.00003365353,0.00003296043],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980593,0.0010556526,0.0002354138,0.00033137723,0.00005835776,0.0002599415],"domain_scores_gemma":[0.9993831,0.00013264967,0.000053493288,0.00033921807,0.000029988136,0.0000615642],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012345309,0.00013870634,0.00028955092,0.00016380285,0.00006013936,0.000008428787,0.00007895229,0.00018933852,0.00001778899],"category_scores_gemma":[0.00036918503,0.000105321866,0.00008577196,0.0002630986,0.00015445816,0.000013262486,0.00004519201,0.00034721085,0.0000028091113],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00005487797,0.000016146076,0.001018695,0.00003418922,0.00004224196,0.000028736335,0.00018193356,0.00007791851,0.9696694,0.0010215879,0.0000026349192,0.027851624],"study_design_scores_gemma":[0.003539045,0.00049066945,0.0128155835,0.00014992281,0.00023306858,0.00055628346,0.00009806472,0.006881016,0.9616332,0.0074531543,0.005769489,0.00038048712],"about_ca_topic_score_codex":0.000053618547,"about_ca_topic_score_gemma":0.000013162487,"teacher_disagreement_score":0.30442777,"about_ca_system_score_codex":0.000051694085,"about_ca_system_score_gemma":0.000022979078,"threshold_uncertainty_score":0.42949012},"labels":[],"label_agreement":null},{"id":"W59098144","doi":"10.1007/978-1-60761-157-8_22","title":"Sequential Peptide Affinity Purification System for the Systematic Isolation and Identification of Protein Complexes from Escherichia coli","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":49,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Escherichia coli; Protein tag; Tandem affinity purification; Proteome; Tobacco etch virus; FLAG-tag; Biology; Protein purification; Intein; Peptide; Fusion protein; Computational biology; Affinity chromatography; Biochemistry; Molecular biology; Recombinant DNA; Gene; Genetics; Enzyme; RNA splicing; Virus","score_opus":0.021307109363979972,"score_gpt":0.32715232847881554,"score_spread":0.3058452191148356,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W59098144","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46816146,0.00093385397,0.5297717,0.00014763941,0.00008860925,0.0008541879,0.00002706732,0.000007945583,0.000007565833],"genre_scores_gemma":[0.7912342,0.00003989298,0.20837358,0.00003783069,0.00004532648,0.00014382425,0.00010594123,0.00000921559,0.000010205967],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982084,0.00069592235,0.0005421412,0.00034851802,0.000046418496,0.0001586016],"domain_scores_gemma":[0.999027,0.000071107985,0.0003564954,0.0004234309,0.00009998543,0.000021971131],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00114326,0.00014022259,0.00028910497,0.000061228384,0.00006206145,0.000020628784,0.00023295837,0.00033353354,9.751765e-7],"category_scores_gemma":[0.00035716017,0.000110581204,0.00006942005,0.00011559771,0.0001328903,0.0000025135876,0.00005623237,0.00008119449,3.7817847e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007539723,0.00002820347,0.000055031953,0.00026635997,0.000040949828,1.746661e-7,0.00002472471,0.0000206487,0.99409425,0.0041712825,0.0000017491689,0.0012212492],"study_design_scores_gemma":[0.00035066507,0.0002638314,0.0016195768,0.000079802034,0.000057117442,0.0000021085364,0.000088740315,0.0015325905,0.99344885,0.002316061,0.00012393635,0.000116690615],"about_ca_topic_score_codex":0.000041869356,"about_ca_topic_score_gemma":0.000014198262,"teacher_disagreement_score":0.32307273,"about_ca_system_score_codex":0.000016493723,"about_ca_system_score_gemma":0.000028923443,"threshold_uncertainty_score":0.45093706},"labels":[],"label_agreement":null},{"id":"W59404946","doi":"10.1007/978-1-60327-287-2_4","title":"Saussurea medusa Cell Suspension Cultures for Flavonoid Production","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"Callus; Flavonoid; Suspension culture; Sucrose; Botany; Biology; Explant culture; Murashige and Skoog medium; Agar; Chemistry; Food science; Antioxidant; Traditional medicine; Cell culture; Biochemistry; In vitro; Bacteria","score_opus":0.01786602108934157,"score_gpt":0.370936545325796,"score_spread":0.35307052423645446,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W59404946","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.09889617,0.0063081337,0.8906084,0.0016429262,0.0006846028,0.00075987034,0.000013132071,0.000028749233,0.0010580436],"genre_scores_gemma":[0.1708569,0.0004199205,0.8234449,0.0011461296,0.00066437206,0.000085636115,0.0011261895,0.000027016318,0.002228944],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99854386,0.00037183307,0.00024320644,0.0005210636,0.000047312413,0.0002727089],"domain_scores_gemma":[0.999462,0.000015629084,0.000086309505,0.0002966099,0.000090671936,0.000048800743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00057540863,0.00018778948,0.00021325369,0.00006979141,0.00007258064,0.00001190856,0.00015877109,0.00037744694,0.0000041454027],"category_scores_gemma":[0.00032632248,0.00015181219,0.0000985029,0.00010922255,0.000052304124,0.0000034192428,0.000029962139,0.000106965126,0.0000023002442],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007677789,0.00006169127,0.000057579062,0.000009257034,0.000010623353,0.0000026541925,0.000040449926,0.00017132015,0.9861469,0.00061239244,0.0025540937,0.010256233],"study_design_scores_gemma":[0.0003512626,0.00038412807,0.00009449346,0.0000061837254,0.000018505867,0.000019233947,0.000022870323,0.000039073362,0.91881347,0.001436121,0.07862031,0.0001943319],"about_ca_topic_score_codex":0.00001837989,"about_ca_topic_score_gemma":0.00009083775,"teacher_disagreement_score":0.07606621,"about_ca_system_score_codex":0.000016900762,"about_ca_system_score_gemma":0.000049865004,"threshold_uncertainty_score":0.61907214},"labels":[],"label_agreement":null},{"id":"W602317100","doi":"10.1007/978-1-4939-2727-2_4","title":"Evaluation of Bystander Cell Killing Effects in Suicide Gene Therapy of Cancer: Engineered Thymidylate Kinase (TMPK)/AZT Enzyme-Prodrug Axis","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Canadian Blood Services","funders":"Canadian Institutes of Health Research","keywords":"Suicide gene; Bystander effect; Genetic enhancement; Transduction (biophysics); Cancer research; Prodrug; Thymidylate synthase; In vivo; Gene delivery; Cancer cell; Biology; Cancer; Thymidine kinase; Gene; Pharmacology; Immunology; Biochemistry; Genetics; Virus","score_opus":0.05764915575353203,"score_gpt":0.4333292136192865,"score_spread":0.3756800578657545,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W602317100","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.84099257,0.044378325,0.11357766,0.00006928087,0.00015981012,0.000712909,0.000015751411,0.000006228606,0.00008746178],"genre_scores_gemma":[0.9188204,0.0018233109,0.07881289,0.00013030478,0.00005086907,0.00021528828,0.00007530889,0.000052863237,0.000018799188],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9940313,0.004071145,0.0005491578,0.000550352,0.00035805258,0.00044001153],"domain_scores_gemma":[0.9984179,0.00018718887,0.00019838763,0.00062893593,0.00047147146,0.00009608737],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.007803732,0.00026430303,0.00050034164,0.00031631807,0.00001572449,0.000005015386,0.00037555894,0.00035206196,0.000017546907],"category_scores_gemma":[0.0010102541,0.0002486407,0.00012800931,0.00044526666,0.00015703941,0.0000041137423,0.00011669885,0.0002169601,6.992804e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0009711681,0.00014863115,0.0026046527,0.000036548157,0.00009405102,0.000005861096,0.00017136455,0.013797547,0.9377197,0.000017799464,0.000008414275,0.044424247],"study_design_scores_gemma":[0.003751879,0.0016782463,0.000298001,0.000030219247,0.00002517889,0.0000014651705,0.000041278687,0.0042912294,0.9878772,0.0015826165,0.00019488325,0.00022781057],"about_ca_topic_score_codex":0.0003793268,"about_ca_topic_score_gemma":0.00028408077,"teacher_disagreement_score":0.07782779,"about_ca_system_score_codex":0.00011218522,"about_ca_system_score_gemma":0.00045993997,"threshold_uncertainty_score":0.9999966},"labels":[],"label_agreement":null},{"id":"W616192929","doi":"10.1007/978-1-59745-060-7","title":"Stem Cells in Regenerative Medicine","year":2008,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Pluripotent Stem Cells Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Regenerative medicine; Stem cell; Biology; Cell biology","score_opus":0.037520775700610916,"score_gpt":0.3904526738945811,"score_spread":0.3529318981939702,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W616192929","genre_codex":"methods","genre_gemma":"other","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"other","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0034829904,0.05749481,0.55605197,0.00074712606,0.0019380719,0.003035578,0.00018159646,0.000055096545,0.3770128],"genre_scores_gemma":[0.00022736352,0.01160976,0.24874413,0.0011178494,0.0007396659,0.00029217944,0.0011414397,0.00028396072,0.73584366],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9936262,0.002994586,0.00088408135,0.0014440769,0.00024368564,0.0008074],"domain_scores_gemma":[0.9981814,0.00017713962,0.0002721521,0.0010822291,0.000135172,0.00015191584],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0019340325,0.00063508766,0.0010800217,0.0006736581,0.000045355348,0.000007457095,0.00085886277,0.0017510421,0.00005320859],"category_scores_gemma":[0.00015302698,0.000593022,0.00021276437,0.0002719272,0.00072699116,0.000002006639,0.00058784283,0.000999586,0.00003162477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000088926434,0.00004974802,0.000075627446,0.00006413828,0.00008893792,0.00040379513,0.00007301591,0.0000879383,0.98361766,0.0010440106,0.006580617,0.007825588],"study_design_scores_gemma":[0.0011248055,0.00063421804,0.000011962911,0.00013267684,0.000017247583,0.0000643705,0.000018422668,0.000055659482,0.6266899,0.0020355678,0.3686244,0.00059075904],"about_ca_topic_score_codex":0.000053353833,"about_ca_topic_score_gemma":0.000093788694,"teacher_disagreement_score":0.36204377,"about_ca_system_score_codex":0.00023205901,"about_ca_system_score_gemma":0.0005924582,"threshold_uncertainty_score":0.99965215},"labels":[],"label_agreement":null},{"id":"W616741222","doi":"10.1007/978-1-4939-2697-8_16","title":"Live Cell and Immuno-Labeling Techniques to Study Gravitational Effects on Single Plant Cells","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Spaceflight effects on biology","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Natural Sciences and Engineering Research Council of Canada; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Gametophyte; Plant cell; Biological system; Biology; Cytoplasm; Gravitation; Pollen; Cell; Biophysics; Physics; Cell biology; Botany; Classical mechanics","score_opus":0.030297575493068683,"score_gpt":0.40235766391288746,"score_spread":0.3720600884198188,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W616741222","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.85985327,0.00075305277,0.13618666,0.00043386102,0.00034297496,0.001796232,0.000006322936,0.00007877123,0.000548853],"genre_scores_gemma":[0.17951153,0.000007640965,0.81841326,0.0017879626,0.000048732858,0.00015754504,0.000020195735,0.000023675912,0.000029439097],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99676377,0.0020760496,0.00025948926,0.0004956744,0.00009697304,0.0003080184],"domain_scores_gemma":[0.99840885,0.0009738967,0.000071653965,0.00030764542,0.000081627724,0.00015634565],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018894363,0.00022275331,0.000504343,0.00035392249,0.000026495472,0.000008266862,0.00011177922,0.0002269771,0.0000049382334],"category_scores_gemma":[0.00091327325,0.00018152727,0.000041667503,0.00021549316,0.00006738765,0.000010553729,0.00012760973,0.00027474554,0.00001925015],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033546827,0.00043671788,0.0043942407,0.000023226332,0.0000454448,0.00021302117,0.0007221363,0.0000027096805,0.9805857,0.00016213831,0.000046869223,0.013032339],"study_design_scores_gemma":[0.0015899595,0.010758698,0.0010373631,0.00004763711,0.000050537124,0.00003882568,0.00024973106,0.000021787637,0.9836842,0.001437039,0.0008994344,0.00018482465],"about_ca_topic_score_codex":0.000061819585,"about_ca_topic_score_gemma":0.0000053839535,"teacher_disagreement_score":0.6822266,"about_ca_system_score_codex":0.000093649745,"about_ca_system_score_gemma":0.000042712498,"threshold_uncertainty_score":0.7402467},"labels":[],"label_agreement":null},{"id":"W62347977","doi":"10.1007/978-1-62703-673-3_11","title":"Assessment of Antimicrobial (Host Defense) Peptides as Anti-Cancer Agents","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Antimicrobial Peptides and Activities","field":"Immunology and Microbiology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Antimicrobial; Antimicrobial peptides; Host (biology); Cancer; Computational biology; Microbiology; Biology; Chemistry; Ecology; Genetics","score_opus":0.021929049107112988,"score_gpt":0.37696660821610445,"score_spread":0.3550375591089915,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W62347977","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.92276734,0.000532525,0.072186016,0.0002625754,0.0006693246,0.00042948217,0.000044397908,0.000036460548,0.003071878],"genre_scores_gemma":[0.8283588,0.00022915578,0.169628,0.0008375766,0.000021217787,0.000056276578,0.000053487634,0.00003113547,0.0007843444],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99718785,0.0012165305,0.0005414041,0.0004800445,0.000026299173,0.0005478924],"domain_scores_gemma":[0.99906236,0.00019114501,0.00025868727,0.00035751364,0.000104358216,0.000025912215],"candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0005532023,0.00028565037,0.0006935241,0.00024684303,0.00008049682,0.000015752314,0.00035279043,0.00043493524,0.0017743465],"category_scores_gemma":[0.00012660635,0.0002557712,0.00020569118,0.00020687727,0.0006072292,0.00007409459,0.0002465322,0.000395472,0.00011157848],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013428428,0.00013832812,0.024074491,0.00003343933,0.0001646967,0.000004980125,0.00008403105,0.000044474058,0.9685579,0.003040579,0.0006134671,0.0032301894],"study_design_scores_gemma":[0.000816411,0.00013463417,0.021702614,0.000057688205,0.000034508586,0.000029484572,0.00013188816,0.00001890074,0.97384727,0.0007105361,0.0022232702,0.00029280313],"about_ca_topic_score_codex":0.0015930997,"about_ca_topic_score_gemma":0.000013462697,"teacher_disagreement_score":0.09744198,"about_ca_system_score_codex":0.000046625406,"about_ca_system_score_gemma":0.00009696339,"threshold_uncertainty_score":0.99998945},"labels":[],"label_agreement":null},{"id":"W62973568","doi":"10.1007/978-1-61779-965-5_4","title":"Barcode Sequencing for Understanding Drug–Gene Interactions","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research; National Human Genome Research Institute; University of Toronto","keywords":"Barcode; Computational biology; DNA sequencing; Biology; Illumina dye sequencing; Genetics; Gene; Computer science","score_opus":0.10336299333110793,"score_gpt":0.448251060858916,"score_spread":0.34488806752780804,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W62973568","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.017167542,0.0008793813,0.9796999,0.00022949307,0.00062301644,0.00022706181,0.000008312755,0.000012691371,0.0011526212],"genre_scores_gemma":[0.4875706,0.000037706875,0.5112975,0.0004110738,0.00016533009,0.00015207345,0.00008446747,0.000022337492,0.00025887057],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859947,0.00046817854,0.00023010059,0.00031031118,0.00003844566,0.0003534709],"domain_scores_gemma":[0.9994393,0.000060588416,0.00008496101,0.00030029417,0.000034651068,0.00008019467],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00075473456,0.00013477793,0.00014706537,0.00012825028,0.00007007255,0.000009623577,0.00015088379,0.00013358955,0.00001956005],"category_scores_gemma":[0.0002591678,0.00013244823,0.00009833708,0.0001388099,0.000060783153,0.0000048222423,0.00007564999,0.000103022874,0.0000021397234],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031741307,0.000024000594,0.0009932042,0.0000077475715,0.000020611153,2.3807466e-7,0.000074543546,0.000047956088,0.985055,0.01114313,0.0002957615,0.002306045],"study_design_scores_gemma":[0.00034209344,0.000043580232,0.0000972327,0.000008666276,0.000011973546,0.0000100921325,0.00041367012,0.00016993839,0.95726913,0.0076423157,0.033823825,0.00016749612],"about_ca_topic_score_codex":0.000008005855,"about_ca_topic_score_gemma":0.000009113779,"teacher_disagreement_score":0.47040308,"about_ca_system_score_codex":0.0001233658,"about_ca_system_score_gemma":0.000057348192,"threshold_uncertainty_score":0.5401082},"labels":[],"label_agreement":null},{"id":"W63573610","doi":"10.1007/978-1-59745-205-2_7","title":"G Protein-Coupled Receptors Disrupted in Human Genetic Disease","year":2008,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Pancreatic function and diabetes","field":"Medicine","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Surrey Place Centre; University of Toronto","funders":"","keywords":"Receptor; Biology; Computational biology; Neuroscience; Genetics; Cell biology","score_opus":0.051334272814590465,"score_gpt":0.44084138360089664,"score_spread":0.3895071107863062,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W63573610","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000830496,0.971286,0.025059668,0.000027543818,0.00023760226,0.0020033715,0.00000707643,0.000048940954,0.000499278],"genre_scores_gemma":[0.0000045188035,0.77721214,0.22113138,0.00014327015,0.00006882271,0.00074660423,0.00024669373,0.0000624007,0.00038418232],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952322,0.002547644,0.000923684,0.0007230383,0.000109129076,0.00046425642],"domain_scores_gemma":[0.9985777,0.000250655,0.00023379787,0.00067133823,0.00003692878,0.00022956495],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005637205,0.0004758683,0.002346437,0.000732024,0.000033570203,0.0000057588168,0.0001897182,0.00057085865,0.00024767153],"category_scores_gemma":[0.0018584408,0.00037668305,0.00046509504,0.0007373641,0.00021072575,0.000008967569,0.00009370395,0.0006179465,0.00002778924],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000057217425,0.0003343744,0.0011937203,0.0063082944,0.00020199473,0.00091492233,0.00002874212,0.0000017449474,0.008913618,0.00040199,0.00004634243,0.98159707],"study_design_scores_gemma":[0.0017669911,0.00037836583,0.00034670616,0.008012188,0.00058527075,0.00008556013,0.0000067639476,0.00008315527,0.00036571335,0.001154034,0.9864892,0.0007260658],"about_ca_topic_score_codex":0.00004699364,"about_ca_topic_score_gemma":0.0000019912625,"teacher_disagreement_score":0.98644286,"about_ca_system_score_codex":0.00019824956,"about_ca_system_score_gemma":0.000341967,"threshold_uncertainty_score":0.9998685},"labels":[],"label_agreement":null},{"id":"W6375506","doi":"10.1007/978-1-61779-876-4_2","title":"In-Fusion® Cloning with Vaccinia Virus DNA Polymerase","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Poxvirus research and outbreaks","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Mount Sinai Hospital; University of Alberta","funders":"Canadian Institutes of Health Research","keywords":"Molecular cloning; Exonuclease; Cloning (programming); Vaccinia; Biology; Polymerase; DNA; In vitro recombination; Amplicon; Molecular biology; Polymerase chain reaction; Recombinant DNA; Virology; Genetics; Gene; Complementary DNA; Computer science","score_opus":0.019799244519557627,"score_gpt":0.38226257633136007,"score_spread":0.36246333181180246,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6375506","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8778925,0.016799565,0.10052129,0.000434675,0.0007013374,0.00037751687,0.000019672749,0.000050064173,0.0032033806],"genre_scores_gemma":[0.82754886,0.00023379347,0.16917004,0.0020030388,0.00007642131,0.00013372996,0.00007817886,0.000053978896,0.0007019477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99557805,0.0026493082,0.00032361006,0.00036228303,0.000028495735,0.0010582686],"domain_scores_gemma":[0.99906844,0.0003887557,0.000075317716,0.00037472448,0.00002496711,0.00006779953],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016911994,0.0002244002,0.00041164807,0.0004001485,0.000069423244,0.0000064842793,0.00030369943,0.0004266006,0.00072271406],"category_scores_gemma":[0.00041041506,0.00017523553,0.000066074055,0.00039818417,0.00021187306,0.000078985664,0.00021205653,0.0006537561,0.00019386878],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00033832868,0.0001422841,0.018482875,0.00000583092,0.0000499089,0.000053781903,0.00024538356,0.0000012419682,0.96282935,0.0025428054,0.000070694456,0.015237517],"study_design_scores_gemma":[0.001544965,0.00025260999,0.0063888566,0.000017781493,0.000010608997,0.00012221152,0.000061638944,0.0000033064287,0.96245766,0.0006400457,0.028259387,0.0002409443],"about_ca_topic_score_codex":0.00070378016,"about_ca_topic_score_gemma":0.00012702466,"teacher_disagreement_score":0.06864875,"about_ca_system_score_codex":0.000057101366,"about_ca_system_score_gemma":0.00007227771,"threshold_uncertainty_score":0.7913212},"labels":[],"label_agreement":null},{"id":"W63843810","doi":"10.1007/978-1-60761-817-1_11","title":"Detection of Measles, Mumps, and Rubella Viruses","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virology and Viral Diseases","field":"Medicine","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Rubella; Virology; Measles; Mumps virus; Rubella virus; Measles virus; Outbreak; Genotyping; Serology; Biology; Vaccination; Medicine; Virus; Immunology; Antibody; Gene; Genotype; Genetics","score_opus":0.027086514678730286,"score_gpt":0.41896981672399297,"score_spread":0.39188330204526267,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W63843810","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8556303,0.0010518801,0.14254431,0.00009566663,0.00015087707,0.000114558825,0.0000027219437,0.000014416567,0.0003952559],"genre_scores_gemma":[0.8007823,0.00004298621,0.19864695,0.00047434855,0.00002215386,0.0000099736635,0.00000248088,0.000007268884,0.000011529385],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9991534,0.00036127385,0.00015891153,0.0001779157,0.000027184447,0.00012131042],"domain_scores_gemma":[0.99961346,0.00009829851,0.000043861557,0.00017166232,0.000024871088,0.00004785831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00044656894,0.00007794888,0.00022255321,0.00011679466,0.000016963975,0.000001108753,0.000042208652,0.00022134485,0.000032120042],"category_scores_gemma":[0.00073172094,0.00006505418,0.00004351912,0.00009274697,0.00025584394,0.000009452068,0.000037108322,0.00022030062,0.0000018069226],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012447829,0.000053764372,0.03260024,0.000020118712,0.000020843354,0.000012833899,0.000015754304,2.3984012e-7,0.9203805,0.001703813,0.0000013514766,0.04506607],"study_design_scores_gemma":[0.00065283966,0.00039399866,0.03587083,0.000008282504,0.000058691392,0.000040638606,0.000010720578,0.00009836807,0.94983566,0.010726202,0.00223316,0.00007062587],"about_ca_topic_score_codex":0.000058860333,"about_ca_topic_score_gemma":0.00005020827,"teacher_disagreement_score":0.056102626,"about_ca_system_score_codex":0.000003812581,"about_ca_system_score_gemma":0.00001928992,"threshold_uncertainty_score":0.26528323},"labels":[],"label_agreement":null},{"id":"W63931750","doi":"10.1007/978-1-59745-060-7_4","title":"Measurement of Cell-Penetrating Peptide-Mediated Transduction of Adult Hematopoietic Stem Cells","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Transduction (biophysics); Cell biology; Stem cell; Embryonic stem cell; Antennapedia; Haematopoiesis; Progenitor cell; Biology; Cell type; Cell; Chemistry; Transcription factor; Homeobox; Gene; Genetics; Biochemistry","score_opus":0.0274660414541055,"score_gpt":0.3091775629846149,"score_spread":0.2817115215305094,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W63931750","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68571484,0.0011159695,0.31258532,0.00001416753,0.0001310931,0.00014571969,0.0000070042215,0.000004458675,0.0002814174],"genre_scores_gemma":[0.88160354,0.00048259247,0.11773983,0.00006680623,0.000022777685,0.000020245952,0.000016176835,0.000017283986,0.000030758714],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980241,0.00064188417,0.00058572064,0.0003720321,0.00013507775,0.00024118456],"domain_scores_gemma":[0.9990724,0.000026012423,0.00022475811,0.00035004955,0.00028194793,0.00004486197],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006466263,0.00018110336,0.0003456784,0.00011921323,0.000024829673,0.000001752289,0.00022784913,0.00025687835,0.000013701237],"category_scores_gemma":[0.000079431295,0.0001761522,0.00015806266,0.00016859565,0.00017805783,0.0000026089724,0.000051689745,0.00012009964,0.00000207649],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006696411,0.00010653338,0.0015397002,0.00006354957,0.00004255328,0.000005620509,0.00016760845,0.00011724203,0.99664503,0.000033132026,0.000023423649,0.0011886507],"study_design_scores_gemma":[0.0004965792,0.00056835456,0.00020649195,0.000035028617,0.000014121577,0.000017789464,0.00017977357,0.000060368304,0.99806744,0.00007662821,0.00011829333,0.00015915904],"about_ca_topic_score_codex":0.00005003655,"about_ca_topic_score_gemma":0.000015170051,"teacher_disagreement_score":0.1958887,"about_ca_system_score_codex":0.000016157732,"about_ca_system_score_gemma":0.000093507806,"threshold_uncertainty_score":0.7183278},"labels":[],"label_agreement":null},{"id":"W64406686","doi":"10.1007/978-1-60327-310-7_12","title":"Membrane Protease Degradomics: Proteomic Identification and Quantification of Cell Surface Protease Substrates","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Protease and Inhibitor Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria; University of British Columbia","funders":"Canadian Institutes of Health Research; National Institutes of Health; National Cancer Institute; National Institute for Health and Care Research","keywords":"Proteases; Protease; Biochemistry; Proteomics; Biology; Chemistry; Cell; Computational biology; Enzyme","score_opus":0.017235925260674825,"score_gpt":0.3297464008280246,"score_spread":0.3125104755673498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W64406686","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.61883277,0.00064859504,0.37918383,0.00010556704,0.00004764153,0.0010995333,0.000012054478,0.0000107482765,0.000059238402],"genre_scores_gemma":[0.6757841,0.00009529786,0.32378307,0.00007241712,0.000024195577,0.000090617614,0.0000889996,0.000015621394,0.000045681936],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99762046,0.0008741737,0.0005363622,0.000611805,0.00007822986,0.00027897063],"domain_scores_gemma":[0.9989851,0.000019316674,0.0002911406,0.0005186439,0.00010435266,0.000081441765],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014205164,0.00022632022,0.0002911443,0.00010835505,0.00004676295,0.000018333954,0.00022537005,0.00032229596,0.0000050194994],"category_scores_gemma":[0.0003039165,0.00022306386,0.000084321815,0.0001810622,0.0001299817,0.0000086125165,0.00005431686,0.000156548,0.0000021748563],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00016293807,0.00015143838,0.00032658636,0.000056111534,0.000011693625,0.0000029269559,0.000026267851,0.000052072188,0.995848,0.0011533235,0.000004579203,0.002204076],"study_design_scores_gemma":[0.00067103875,0.00043979043,0.000322666,0.000021381777,0.0000189415,0.000009605668,0.000024819847,0.00038306954,0.9919578,0.0058522034,0.00006812162,0.00023057983],"about_ca_topic_score_codex":0.000031332514,"about_ca_topic_score_gemma":0.0000020354994,"teacher_disagreement_score":0.056951314,"about_ca_system_score_codex":0.00001530549,"about_ca_system_score_gemma":0.000084967665,"threshold_uncertainty_score":0.90962803},"labels":[],"label_agreement":null},{"id":"W64611148","doi":"10.1007/978-1-59745-000-3_3","title":"Oocyte Isolation and Enucleation","year":2006,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Reproductive Biology and Fertility","field":"Medicine","cited_by":34,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Oocyte; Collagenase; Enucleation; Xenopus; Cell biology; Follicle; Biology; Vitelline membrane; Anatomy; Andrology; Embryo; Endocrinology; Medicine; Enzyme; Biochemistry; Genetics; Gene","score_opus":0.07288687755013072,"score_gpt":0.48866097972974193,"score_spread":0.4157741021796112,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W64611148","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000019766254,0.7892909,0.20895731,0.0000377934,0.00013944683,0.0005181291,0.0000045965357,0.000018346662,0.0010137009],"genre_scores_gemma":[0.0000022348895,0.71004725,0.28939,0.00006982288,0.000073967625,0.000045399665,0.00022080427,0.000016887165,0.00013362773],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99665684,0.0020591004,0.0004684686,0.0006067471,0.000029526207,0.00017934614],"domain_scores_gemma":[0.99917763,0.00018273808,0.00017371132,0.00038083683,0.00005215663,0.000032914588],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001431156,0.00022807319,0.0011862661,0.00023195615,0.000024444289,0.0000036938318,0.00006101096,0.000762466,0.000019333687],"category_scores_gemma":[0.00088618917,0.00017432649,0.00016047517,0.00020874616,0.00019492001,0.000012188093,0.000060471273,0.00041039212,0.0000080449745],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008642725,0.000030571173,0.00020749183,0.0013423712,0.00005223348,0.000011924128,0.0000071853347,4.6997418e-8,0.0016679959,0.00032920262,0.000014996477,0.99624956],"study_design_scores_gemma":[0.0002214711,0.00016235907,0.0015911539,0.0005382315,0.00034078833,0.00010814522,0.0000012047244,0.000013273083,0.00018798033,0.0021774282,0.9944871,0.00017085046],"about_ca_topic_score_codex":0.000019394774,"about_ca_topic_score_gemma":0.0000011867448,"teacher_disagreement_score":0.9960787,"about_ca_system_score_codex":0.00007071971,"about_ca_system_score_gemma":0.00006757712,"threshold_uncertainty_score":0.7108828},"labels":[],"label_agreement":null},{"id":"W648204534","doi":"10.1007/978-1-59745-394-3","title":"Hepatitis C: Methods and Protocols","year":2009,"lang":"en","type":"book","venue":"Methods in molecular biology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Institutes of Health; École Normale Supérieure de Lyon; Centre Hospitalier Universitaire Vaudois; Université de Lausanne; Pfizer; Hospital for Sick Children; Università degli Studi di Genova; Albert-Ludwigs-Universität Freiburg; Saint Louis University; Institut National de la Santé et de la Recherche Médicale; National Institute of Diabetes and Digestive and Kidney Diseases; Florida State University; Universite Angers; University of Alberta; Office of International Science and Engineering; Universität Basel; Yale University; Los Alamos National Laboratory; Université de Lyon; Universität Heidelberg","keywords":"Virology; Hepatitis virus; Hepatitis; Hepatitis a virus; Medicine; Psychology; Family medicine; Virus","score_opus":0.07476801275561108,"score_gpt":0.5478916561049261,"score_spread":0.473123643349315,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W648204534","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000010601233,0.00206309,0.6074586,0.00034209798,0.00006591519,0.01316868,0.00001732746,0.00006232038,0.3768114],"genre_scores_gemma":[4.501702e-7,0.000918481,0.8913596,0.0013191628,0.00012558876,0.0045404066,0.00010657818,0.00009568087,0.10153402],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99228334,0.005006454,0.00077175617,0.001013089,0.00023536483,0.00068998913],"domain_scores_gemma":[0.99765414,0.0007782274,0.00019170261,0.000937091,0.00016600553,0.00027284486],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.004843093,0.0004990123,0.0015907481,0.00080251123,0.00004254305,0.000025739097,0.00030055834,0.0014910207,0.00030814018],"category_scores_gemma":[0.0030154504,0.00046270667,0.00021338416,0.00025519813,0.00046021127,0.000022163562,0.00029178715,0.0016430016,0.00002756392],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007881568,0.00005920069,0.0018457157,0.00030911597,0.00012467938,0.00071467186,0.00004707812,2.760637e-7,0.052224543,0.0061134784,0.001869537,0.9366129],"study_design_scores_gemma":[0.0011935007,0.0013471228,0.00052536104,0.0005294441,0.000077815166,0.00009725368,0.0000015637825,0.0001477288,0.016880147,0.07508255,0.9036513,0.00046622456],"about_ca_topic_score_codex":0.00014644211,"about_ca_topic_score_gemma":0.000041325406,"teacher_disagreement_score":0.9361467,"about_ca_system_score_codex":0.0003581167,"about_ca_system_score_gemma":0.000812102,"threshold_uncertainty_score":0.9998053},"labels":[],"label_agreement":null},{"id":"W65533086","doi":"10.1007/978-1-61779-108-6_2","title":"Cell Viability Analysis Using Trypan Blue: Manual and Automated Methods","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Animal testing and alternatives","field":"Veterinary","cited_by":379,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University Health Network","funders":"","keywords":"Hemocytometer; Trypan blue; Reproducibility; Instrumentation (computer programming); Viability assay; Computer science; Biomedical engineering; Engineering; Chromatography; Biology; Chemistry; Cell; Biochemistry; Operating system","score_opus":0.23118186524552392,"score_gpt":0.5449882586341825,"score_spread":0.3138063933886586,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W65533086","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4905221,0.00020982359,0.5084371,0.0000030500807,0.000044726967,0.00006998123,0.0000052962514,0.00010381893,0.00060409744],"genre_scores_gemma":[0.3377249,0.0000036808756,0.6621785,0.00004497194,0.000009853354,0.0000073401607,0.00000439604,0.000013817226,0.000012543717],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99243695,0.006182809,0.00039575988,0.00059991877,0.00004850217,0.00033603547],"domain_scores_gemma":[0.9988233,0.00053627504,0.00015668363,0.00036272572,0.000045543708,0.00007549088],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026893192,0.0002176985,0.000520927,0.00032836484,0.00006160285,0.000011525751,0.00021431955,0.00019384745,0.0001006056],"category_scores_gemma":[0.0006048718,0.00019644354,0.0001382199,0.0006073647,0.00026834744,0.000033883967,0.00023460468,0.00023804899,0.000002363753],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001098198,0.000108449094,0.03157905,0.000025230449,0.00021895806,0.00010001835,0.0009935467,0.000030818883,0.9558399,0.00038430138,9.661812e-7,0.010608987],"study_design_scores_gemma":[0.0010391253,0.0020234387,0.11771747,0.000026281024,0.0010085118,0.00016334307,0.00095372315,0.34453613,0.50896376,0.02226502,0.00022842323,0.0010747754],"about_ca_topic_score_codex":0.0006128913,"about_ca_topic_score_gemma":0.0000040897044,"teacher_disagreement_score":0.44687608,"about_ca_system_score_codex":0.000035193727,"about_ca_system_score_gemma":0.00001846792,"threshold_uncertainty_score":0.8010735},"labels":[],"label_agreement":null},{"id":"W65802235","doi":"10.1007/978-1-4939-2428-8_23","title":"Evidence-Based Decision-Making 1: Critical Appraisal","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health Sciences Research and Education","field":"Health Professions","cited_by":21,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Critical appraisal; Management science; Evidence-based medicine; Strengths and weaknesses; Hierarchy; Process (computing); Quality (philosophy); Engineering ethics; Psychology; Computer science; Knowledge management; Medicine; Process management; Epistemology; Alternative medicine; Engineering; Political science; Social psychology; Pathology","score_opus":0.4512867463297572,"score_gpt":0.7046739178867664,"score_spread":0.2533871715570092,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W65802235","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.029408276,0.0011918342,0.958837,0.0049186717,0.0035338772,0.0003236673,0.000001869194,0.000033717428,0.0017511103],"genre_scores_gemma":[0.104913756,0.000017341019,0.89135146,0.003291838,0.00021036286,0.00018203468,0.0000027306176,0.000010587719,0.000019870045],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.98889714,0.009001149,0.0005849108,0.0004024628,0.00023647596,0.00087785476],"domain_scores_gemma":[0.9655035,0.033272542,0.00008610248,0.00039871206,0.00038995137,0.0003491886],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.016436007,0.00010809908,0.00025025042,0.00042263055,0.00020578876,0.000009999955,0.00037616646,0.0002934657,0.00032102957],"category_scores_gemma":[0.20793298,0.00008774563,0.00003716787,0.00098832,0.00026565284,0.000087406486,0.00014501919,0.0007115227,0.00017163609],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0008290503,0.00035094752,0.19944341,0.00041952488,0.000013281138,0.00011288999,0.0051815463,0.0003566215,0.059496984,0.09001331,0.01907684,0.62470555],"study_design_scores_gemma":[0.0035162,0.0026530176,0.02965547,0.0053821886,0.000030581294,0.000021361036,0.01212509,0.052287668,0.005307231,0.6705137,0.21711719,0.0013903269],"about_ca_topic_score_codex":0.00016823012,"about_ca_topic_score_gemma":0.00003537094,"teacher_disagreement_score":0.6233153,"about_ca_system_score_codex":0.00022309441,"about_ca_system_score_gemma":0.0026047216,"threshold_uncertainty_score":0.79873896},"labels":[],"label_agreement":null},{"id":"W66639700","doi":"10.1007/978-1-61779-204-5_8","title":"Analyses of PCSK9 Post-translational Modifications Using Time-of-Flight Mass Spectrometry","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Chemistry; Deamidation; Glycosylation; Mass spectrometry; Biochemistry; Time-of-flight mass spectrometry; Proteomics; Gel electrophoresis; Protein mass spectrometry; Tandem mass spectrometry; Peptide; Immunoprecipitation; Proprotein convertase; Chromatography; Enzyme; LDL receptor","score_opus":0.08597239994610421,"score_gpt":0.44534507430902887,"score_spread":0.35937267436292464,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W66639700","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.050903775,0.00023719354,0.94447136,0.000024110654,0.0000072163534,0.000086245935,0.000054986427,0.000021329735,0.0041937805],"genre_scores_gemma":[0.06482199,0.000013509755,0.93504316,0.000013816875,0.000007731999,0.000026902797,0.000035557474,0.000013346482,0.000024012284],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990907,0.00011143421,0.0003890653,0.00022469567,0.000046632867,0.00013752482],"domain_scores_gemma":[0.99920386,0.000103089194,0.00020399332,0.00036976187,0.000093848896,0.000025441801],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00025290588,0.000104080085,0.00024579148,0.000180104,0.000022784354,0.0000013307001,0.00023209711,0.00015733359,0.0003891975],"category_scores_gemma":[0.00008864943,0.00010453006,0.00010180438,0.00032399863,0.0001511825,0.000019324085,0.00003416938,0.00013038919,0.000001147792],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012101243,0.000059918853,0.0006962932,0.000016486421,0.000032875312,6.562356e-7,0.000048768612,0.00009560665,0.98019683,0.018051978,2.5242142e-7,0.0007882341],"study_design_scores_gemma":[0.00008622568,0.000016359227,0.00007818091,0.000009317362,0.000028027767,0.0000030226577,0.000016292413,0.0015020333,0.9174884,0.08064302,0.000039808776,0.00008931627],"about_ca_topic_score_codex":0.000066480156,"about_ca_topic_score_gemma":5.786668e-7,"teacher_disagreement_score":0.06270843,"about_ca_system_score_codex":0.00001917873,"about_ca_system_score_gemma":0.000036088426,"threshold_uncertainty_score":0.42626122},"labels":[],"label_agreement":null},{"id":"W67597426","doi":"10.1007/978-1-60761-588-0_14","title":"Nonviral siRNA Delivery for Gene Silencing in Neurodegenerative Diseases","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"RNA Interference and Gene Delivery","field":"Biochemistry, Genetics and Molecular Biology","cited_by":17,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Gene silencing; Disease; Viral vector; Gene delivery; Genetic enhancement; Amyotrophic lateral sclerosis; Blood–brain barrier; Medicine; RNA interference; Drug discovery; Neuroscience; Biology; Bioinformatics; Computational biology; Gene; RNA; Central nervous system; Pathology; Genetics; Recombinant DNA","score_opus":0.015501818905894079,"score_gpt":0.36343035822430275,"score_spread":0.34792853931840867,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W67597426","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.71700007,0.00065199984,0.2814262,0.00006317816,0.0004637517,0.00024464432,0.000038830985,0.0000072869925,0.00010408665],"genre_scores_gemma":[0.6757464,0.00011939891,0.32269263,0.00079967413,0.00019740079,0.00016641377,0.00017277355,0.000031915115,0.000073409195],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9980474,0.00046301092,0.00035399376,0.00065817323,0.000049291993,0.00042808973],"domain_scores_gemma":[0.99925566,0.000086547065,0.00008395325,0.00041837187,0.00008082262,0.000074620526],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000512877,0.00023674726,0.00029395896,0.00016867302,0.000042951637,0.000016004316,0.00033891498,0.0003242105,0.000015188012],"category_scores_gemma":[0.0005141456,0.00023247548,0.00015513694,0.00014288678,0.00013800355,0.000005252504,0.0001696838,0.00024914663,0.0000030975839],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012478881,0.00007075377,0.0066689895,0.000007951033,0.000021209818,0.000015529713,0.000038454225,0.00020325012,0.9822738,0.00029700462,0.000043813357,0.010234455],"study_design_scores_gemma":[0.0007018794,0.0004305891,0.0022478914,0.000006634316,0.0000138477635,0.0000117312275,0.00003812429,0.00066276983,0.9926716,0.0013770245,0.0015560753,0.00028180893],"about_ca_topic_score_codex":0.000067963774,"about_ca_topic_score_gemma":0.00022412286,"teacher_disagreement_score":0.04126646,"about_ca_system_score_codex":0.000014447866,"about_ca_system_score_gemma":0.00011331951,"threshold_uncertainty_score":0.9480075},"labels":[],"label_agreement":null},{"id":"W6849394","doi":"10.1007/978-1-61779-412-4_12","title":"Light-Controlled Gene Switches in Mammalian Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Photochromic and Fluorescence Chemistry","field":"Materials Science","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Activator (genetics); Transcription factor; Gene; Transcription (linguistics); Cell biology; Peptide; DNA; Biology; Molecular biology; Gene expression; Chemistry; Genetics; Biochemistry","score_opus":0.027452714775803227,"score_gpt":0.3293664099431969,"score_spread":0.30191369516739364,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W6849394","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.80341244,0.00031711863,0.19255453,0.000050476414,0.00031537967,0.00028916562,0.0000033458048,0.000027632113,0.0030299295],"genre_scores_gemma":[0.2270206,0.00001159468,0.772459,0.00027242478,0.000028328112,0.00011324484,0.0000028319535,0.000015069892,0.000076910925],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99813163,0.00056417927,0.0004030222,0.0004338711,0.000052338477,0.00041494376],"domain_scores_gemma":[0.99938506,0.00007313495,0.00009738341,0.00036118794,0.000019621757,0.000063633255],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016397099,0.0001705669,0.00044985145,0.00013666967,0.00001951041,0.000008840608,0.00042323835,0.00024571895,0.0004093007],"category_scores_gemma":[0.00019860215,0.00014389216,0.00007937702,0.00018713716,0.0001002213,0.0000259444,0.00011521121,0.00016450512,0.000045184006],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013964614,0.00006423877,0.0007193359,0.0000090418225,0.000004072473,0.000069642716,0.00036888738,0.000002394647,0.9979533,0.00027798844,0.000005875992,0.00038559042],"study_design_scores_gemma":[0.0013250182,0.000039768933,0.00020115127,0.000010479245,0.0000063877496,0.000008569575,0.000045487825,0.000054548167,0.9910019,0.00700107,0.00013823816,0.00016737638],"about_ca_topic_score_codex":0.00025805336,"about_ca_topic_score_gemma":0.000013421429,"teacher_disagreement_score":0.57990444,"about_ca_system_score_codex":0.000062973224,"about_ca_system_score_gemma":0.00006543389,"threshold_uncertainty_score":0.58677524},"labels":[],"label_agreement":null},{"id":"W69179620","doi":"10.1007/978-1-61779-160-4_25","title":"Protein-Fragment Complementation Assays for Large-Scale Analysis, Functional Dissection and Dynamic Studies of Protein–Protein Interactions in Living Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":37,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"","keywords":"Protein-fragment complementation assay; Biology; Saccharomyces cerevisiae; Model organism; Fusion protein; Complementation; Computational biology; In silico; mCherry; Protein–protein interaction; Green fluorescent protein; Cell biology; Gene; Genetics; Phenotype; Recombinant DNA","score_opus":0.05793980914978204,"score_gpt":0.4301883635342539,"score_spread":0.37224855438447185,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W69179620","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4971966,0.00044731412,0.5016342,0.00002095359,0.000040287046,0.00060068275,0.000022309083,0.0000025521715,0.00003512538],"genre_scores_gemma":[0.6819519,0.00003220725,0.31719664,0.000012818617,0.0000134815255,0.0005707502,0.00008247188,0.0000113433625,0.00012840751],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981212,0.0007222656,0.0003847503,0.0004280614,0.00007731383,0.00026642715],"domain_scores_gemma":[0.99944246,0.000052048475,0.00012694765,0.00020088497,0.00013933126,0.000038353402],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012480716,0.00014844301,0.00027478856,0.00031250407,0.00005592484,0.0000064354135,0.00010043391,0.00010197584,0.000027783879],"category_scores_gemma":[0.00021613133,0.00014153412,0.000103582744,0.00030692646,0.000095916264,0.000004742012,0.00017307051,0.0001270543,4.065847e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015012315,0.00018799951,0.0045330212,0.00007798757,0.00023699849,8.7334473e-7,0.00024766967,0.00008730248,0.99231416,0.00034149396,0.0000015066493,0.0018208688],"study_design_scores_gemma":[0.00047682092,0.00047873554,0.005654441,0.000045194345,0.000045641762,0.0000016108472,0.0006928872,0.0018060955,0.9884063,0.0020985939,0.00014355282,0.00015012996],"about_ca_topic_score_codex":0.000066755856,"about_ca_topic_score_gemma":0.0009472012,"teacher_disagreement_score":0.18475527,"about_ca_system_score_codex":0.000040388502,"about_ca_system_score_gemma":0.000033277265,"threshold_uncertainty_score":0.5771594},"labels":[],"label_agreement":null},{"id":"W69905405","doi":"10.1007/978-1-60327-325-1_9","title":"Binding of Retinoids to ABCA4, the Photoreceptor ABC Transporter Associated with Stargardt Macular Degeneration","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"ABCA4; Stargardt disease; ATP-binding cassette transporter; Chemistry; Biochemistry; Retinaldehyde; Biology; Retinal; Transporter; Rhodopsin","score_opus":0.00927308379959575,"score_gpt":0.32099818468412494,"score_spread":0.3117251008845292,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W69905405","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.78943133,0.000107415755,0.20932375,0.00017491492,0.00016274537,0.00029324426,0.000011460551,0.0000071692602,0.0004879634],"genre_scores_gemma":[0.7074024,0.000024245737,0.2915508,0.00044267433,0.00003012769,0.00007875179,0.00027473917,0.000031459796,0.00016478919],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984466,0.0004583095,0.0003144088,0.00038286424,0.00010364293,0.0002941884],"domain_scores_gemma":[0.9993752,0.000040804134,0.00011434487,0.0003193341,0.000100521815,0.00004975345],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012102999,0.00019121605,0.00023091285,0.00010102724,0.00005765636,0.0000107327505,0.0002776454,0.0002811586,0.00005499763],"category_scores_gemma":[0.00034403583,0.0001353959,0.00008585627,0.00026765236,0.0001696066,0.0000023856055,0.000050666942,0.00020626333,0.00000206149],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010860448,0.00003593018,0.017426316,0.0000049384985,0.000053602365,0.0000030120084,0.00010507526,0.000033215056,0.9791781,0.00025931097,0.00004806153,0.0027438616],"study_design_scores_gemma":[0.00048335546,0.00030494053,0.0053967102,0.000010939592,0.00002162109,0.000003444299,0.00005236219,0.000025899028,0.9854548,0.00020073802,0.007833527,0.00021168712],"about_ca_topic_score_codex":0.000022152022,"about_ca_topic_score_gemma":0.00015825957,"teacher_disagreement_score":0.08222704,"about_ca_system_score_codex":0.0000122890615,"about_ca_system_score_gemma":0.00007621207,"threshold_uncertainty_score":0.55212843},"labels":[],"label_agreement":null},{"id":"W70003281","doi":"10.1007/978-1-61779-400-1_12","title":"Modeling Gene Regulation Networks Using Ordinary Differential Equations","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"National Institute of General Medical Sciences","keywords":"Ode; Ordinary differential equation; Gene regulatory network; Computer science; Consistency (knowledge bases); Mathematics; Differential equation; Applied mathematics; Gene; Gene expression; Biology; Artificial intelligence; Genetics; Mathematical analysis","score_opus":0.05493735865243428,"score_gpt":0.3591306175589689,"score_spread":0.30419325890653465,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W70003281","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28637192,0.0010424602,0.71215576,0.0000054760876,0.0001780271,0.00012646722,0.000001599373,0.000012976398,0.0001053409],"genre_scores_gemma":[0.5289097,0.00003294045,0.47070697,0.000046060923,0.00011622224,0.000016606267,0.00011694679,0.000027554323,0.0000270349],"study_design_codex":"bench_or_experimental","study_design_gemma":"simulation_or_modeling","domain_scores_codex":[0.9973331,0.0011296524,0.0004459405,0.00059985544,0.000070983,0.0004204589],"domain_scores_gemma":[0.9991017,0.000020184683,0.00011209804,0.00059719966,0.00008864304,0.00008019996],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00067849405,0.00024334043,0.00030706104,0.00019329462,0.000088475856,0.00001011495,0.00026579385,0.00042857378,0.00006176936],"category_scores_gemma":[0.000117802214,0.00025387853,0.0001986178,0.0003257721,0.00010074209,0.000004007138,0.0002352812,0.00015393615,0.0000015813032],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000039312294,0.000041184067,0.0008775265,0.0000026028968,0.00008760076,0.000003675626,0.000021329335,0.22348185,0.77191705,0.0004929643,0.0000024483543,0.0030324764],"study_design_scores_gemma":[0.00031074512,0.00009372858,0.00030600323,0.000006667443,0.000087118155,0.000013747051,0.000014083925,0.82684374,0.16946581,0.0025153458,0.000059650185,0.00028335664],"about_ca_topic_score_codex":0.00009303886,"about_ca_topic_score_gemma":0.000027243243,"teacher_disagreement_score":0.6033619,"about_ca_system_score_codex":0.00003625769,"about_ca_system_score_gemma":0.00004485935,"threshold_uncertainty_score":0.99999136},"labels":[],"label_agreement":null},{"id":"W70110460","doi":"10.1007/978-1-60761-533-0_2","title":"New Protocol for Lentiviral Vector Mass Production","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Biotechnology Research Institute","funders":"","keywords":"Transfection; Viral vector; Polyethylenimine; Chemistry; Chromatography; HEK 293 cells; Cell culture; Molecular biology; Biology; Recombinant DNA; Biochemistry; Gene; Genetics","score_opus":0.04610272399432718,"score_gpt":0.47085367011543994,"score_spread":0.42475094612111275,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W70110460","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0056714597,0.00011964987,0.95025665,0.000952203,0.00016441735,0.042417984,0.000004750479,0.000024096069,0.00038878332],"genre_scores_gemma":[0.0022431766,0.000007458711,0.94561225,0.00058682536,0.00047382692,0.049808104,0.00006314412,0.00004388846,0.0011613494],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9976343,0.0008394845,0.000291157,0.0006664365,0.00008303322,0.00048557116],"domain_scores_gemma":[0.9992018,0.00002361176,0.00008232045,0.00052535,0.00008283343,0.00008412353],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001265588,0.00021505915,0.0002369768,0.00013360346,0.000049522074,0.000016294132,0.0003185033,0.00028815825,0.000029416567],"category_scores_gemma":[0.00046565654,0.00020450138,0.00014259196,0.00020813898,0.00006812459,0.0000033312099,0.00004857287,0.00016185292,0.0000044797107],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001959456,0.000059481386,0.00011854948,0.000012109999,0.00002460497,0.0000020064394,0.000010028537,0.00005126025,0.8986083,0.0003445039,0.0005697271,0.09823995],"study_design_scores_gemma":[0.0013915502,0.0046758116,0.00010940838,0.00000856881,0.0000052213736,0.0000052982573,0.0000049690207,0.000046167275,0.94581187,0.010346061,0.037375234,0.00021987384],"about_ca_topic_score_codex":0.000006727571,"about_ca_topic_score_gemma":0.000018584282,"teacher_disagreement_score":0.09802008,"about_ca_system_score_codex":0.000034554883,"about_ca_system_score_gemma":0.00017378457,"threshold_uncertainty_score":0.8339324},"labels":[],"label_agreement":null},{"id":"W70450476","doi":"10.1007/978-1-61779-139-0_10","title":"Assessment of the Recycling of the Membrane-Bound Chemokine, CX3CL1","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chemokine receptors and signaling","field":"Medicine","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Hospital for Sick Children","funders":"","keywords":"CX3CL1; Chemokine; Medicine; Chemokine receptor; Immunology; Inflammation","score_opus":0.04796827100265101,"score_gpt":0.41817329460188707,"score_spread":0.37020502359923607,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W70450476","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8608537,0.00028573527,0.12813582,0.0002045908,0.00039701533,0.00032785215,0.000002205139,0.0000073428155,0.009785778],"genre_scores_gemma":[0.6351146,0.00001965601,0.36456847,0.00019041362,0.000024079725,0.0000084664625,0.0000012617676,0.000012536411,0.000060531544],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99840087,0.0006934621,0.0004253998,0.00019828165,0.00011016468,0.00017181663],"domain_scores_gemma":[0.99901307,0.00016442237,0.00021228872,0.00051392475,0.00006997862,0.000026311112],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0014842134,0.00011570999,0.00040431047,0.000061615356,0.00002573358,0.0000013249511,0.00026144058,0.00015669165,0.00012674589],"category_scores_gemma":[0.00048781728,0.00006258604,0.00022634125,0.0003359991,0.00023577697,0.000007033441,0.00016353626,0.00029011272,1.5926499e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000016738242,0.000071266244,0.063444324,0.00005529995,0.000048710957,0.0000013750956,0.00015168202,0.0000067079764,0.93106484,0.0022447654,0.0000028973589,0.002891394],"study_design_scores_gemma":[0.00050984527,0.00006660123,0.027612546,0.00009456696,0.00006678058,0.000014071948,0.000056315792,0.00019179178,0.968817,0.0021544069,0.0003543048,0.00006180174],"about_ca_topic_score_codex":0.000117747775,"about_ca_topic_score_gemma":0.0000053614026,"teacher_disagreement_score":0.23643264,"about_ca_system_score_codex":0.00003443936,"about_ca_system_score_gemma":0.00010169004,"threshold_uncertainty_score":0.25521848},"labels":[],"label_agreement":null},{"id":"W71565974","doi":"10.1007/978-1-60761-944-4_19","title":"Application of Blocking Oligonucleotides to Improve Signal-to-Noise Ratio in a PCR","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":78,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Oligonucleotide; Blocking (statistics); Computational biology; Template; Cloning (programming); Biology; DNA; Polymerase chain reaction; Computer science; Molecular biology; Genetics; Gene; Computer network","score_opus":0.008997515851572489,"score_gpt":0.36523716158982417,"score_spread":0.3562396457382517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W71565974","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.33705768,0.000058286732,0.66156447,0.00028091343,0.000054023687,0.00068125577,0.0000125273145,0.000013713725,0.00027713273],"genre_scores_gemma":[0.4907042,0.0000086170685,0.5080429,0.00065770803,0.000035486977,0.00047067413,0.000040969477,0.000022229684,0.000017219267],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979494,0.0003628396,0.0005242998,0.00073128584,0.00005957726,0.00037255112],"domain_scores_gemma":[0.99882334,0.0000475881,0.0001312824,0.0007816591,0.00010223786,0.00011386614],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011419187,0.00022627873,0.0003330388,0.00030453337,0.00003182861,0.00000822532,0.00048399725,0.00043337644,0.000011585764],"category_scores_gemma":[0.00039649595,0.00023347147,0.00010279368,0.00050288584,0.00012210276,0.000002173276,0.0003055492,0.0002762637,0.0000056787253],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004246713,0.00008415075,0.0045344466,0.000008909391,0.000013090674,0.0000018433957,0.00003237154,0.00017604028,0.9534309,0.006137376,0.000018539002,0.035519876],"study_design_scores_gemma":[0.00026730748,0.0002924798,0.0022783126,0.000008311983,0.000007936117,0.0000066406737,0.0000144451,0.00042015538,0.9839347,0.0028998584,0.009623087,0.0002467766],"about_ca_topic_score_codex":0.00015885783,"about_ca_topic_score_gemma":0.00020099792,"teacher_disagreement_score":0.15364651,"about_ca_system_score_codex":0.00001618315,"about_ca_system_score_gemma":0.00005909889,"threshold_uncertainty_score":0.952069},"labels":[],"label_agreement":null},{"id":"W7284180","doi":"10.1007/978-1-4939-2020-4_17","title":"Next-Generation Sequencing of Phage-Displayed Peptide Libraries","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":39,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Alberta Glycomics Centre; University of Alberta","funders":"Alberta Glycomics Centre; University of Alberta","keywords":"DNA sequencing; Computational biology; Metagenomics; Ion semiconductor sequencing; Biology; Phage display; Genome; Genomic library; Genetics; Gene; Base sequence","score_opus":0.2132249619746902,"score_gpt":0.49435359524273237,"score_spread":0.28112863326804216,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7284180","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000056181238,0.84639794,0.15112908,0.000061292085,0.00018332983,0.0005341791,0.000019135556,0.000015838083,0.001603],"genre_scores_gemma":[0.000002822957,0.61181664,0.38693985,0.00012425266,0.00017545058,0.00005384243,0.00031956716,0.000033649223,0.0005339026],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9950312,0.002960021,0.00092801853,0.00051719585,0.00016107314,0.0004024968],"domain_scores_gemma":[0.9983353,0.00070747914,0.00030681092,0.00046179089,0.00007722814,0.00011136487],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0016829639,0.0003726527,0.0024089988,0.0004758542,0.000038027287,0.000015978154,0.00028056424,0.0005868716,0.0001362217],"category_scores_gemma":[0.0009425353,0.00026971806,0.0005443575,0.00041750204,0.0002955014,0.000031057327,0.00020469372,0.00068003754,0.000017893113],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003125531,0.000033524517,0.000028453627,0.010031486,0.00022526257,0.00010020374,0.00003664251,0.0000015622737,0.07162427,0.0064601186,0.000092007926,0.91133523],"study_design_scores_gemma":[0.00027757615,0.00036943884,0.000002591972,0.0029737996,0.000336058,0.0001759784,0.000008483258,0.00036335917,0.011235613,0.0011046684,0.98286676,0.00028569574],"about_ca_topic_score_codex":0.00012304694,"about_ca_topic_score_gemma":0.0000071395352,"teacher_disagreement_score":0.98277473,"about_ca_system_score_codex":0.00008782766,"about_ca_system_score_gemma":0.00052313565,"threshold_uncertainty_score":0.9999755},"labels":[],"label_agreement":null},{"id":"W72891104","doi":"10.1007/978-1-60327-575-0_6","title":"Receptor-DNA Interactions: EMSA and Footprinting","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Vancouver General Hospital; University of British Columbia","funders":"","keywords":"Footprinting; Computational biology; DNA footprinting; DNA; Transcription factor; DNA binding site; Biology; Promoter; HMG-box; Transcription (linguistics); DNA-binding protein; Gene; Genetics; Gene expression","score_opus":0.012612126364570285,"score_gpt":0.3620947835997828,"score_spread":0.34948265723521255,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W72891104","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6269164,0.00067907036,0.37026566,0.00026949233,0.00015986155,0.000108437,0.0000022670583,0.000010096034,0.0015886909],"genre_scores_gemma":[0.29996416,0.00020016522,0.6989522,0.0006380587,0.00006631912,0.000012861727,0.00003832199,0.000015465874,0.000112429574],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998736,0.00033420167,0.0002568784,0.00039405198,0.000028724375,0.0002500936],"domain_scores_gemma":[0.9995156,0.000028854998,0.00008142432,0.0002898293,0.000032617405,0.00005166517],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00054834987,0.00015283452,0.00018215712,0.00008519217,0.000042635158,0.000017926124,0.00015798968,0.00017107607,0.000010175927],"category_scores_gemma":[0.00026037285,0.00015671166,0.000061902974,0.00009466473,0.00006703355,0.0000017464108,0.000121784804,0.00014592856,0.0000019246556],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000013909794,0.000026828846,0.0014420139,0.000003818085,0.000014877139,0.0000020208179,0.00002461656,0.000024165929,0.9307237,0.0022339895,0.000022238915,0.065467805],"study_design_scores_gemma":[0.000743534,0.0005378423,0.0047646994,0.000024031631,0.000016185642,0.0000741867,0.00012583057,0.0009325377,0.92819214,0.018306293,0.04579322,0.0004895279],"about_ca_topic_score_codex":0.000008099711,"about_ca_topic_score_gemma":0.000008027254,"teacher_disagreement_score":0.32868654,"about_ca_system_score_codex":0.000016205197,"about_ca_system_score_gemma":0.000021753276,"threshold_uncertainty_score":0.6390516},"labels":[],"label_agreement":null},{"id":"W73658525","doi":"10.1007/978-1-61779-148-2_17","title":"Protease Specificity Profiling by Tandem Mass Spectrometry Using Proteome-Derived Peptide Libraries","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Deutsche Forschungsgemeinschaft","keywords":"Protease; Proteome; Peptide; Chemistry; Tandem mass spectrometry; Cleavage (geology); Peptide sequence; Scissile bond; Bottom-up proteomics; Biochemistry; Mass spectrometry; Protein mass spectrometry; Biology; Enzyme; Chromatography","score_opus":0.04566065880587458,"score_gpt":0.3614397661727897,"score_spread":0.31577910736691517,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W73658525","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.1285006,0.00026210918,0.8660844,0.00002971256,0.000020907099,0.00064019585,0.00002564556,0.00016887013,0.0042675887],"genre_scores_gemma":[0.013133848,0.000025283663,0.98601454,0.00006401028,0.000043181764,0.00054229936,0.00003429013,0.000053821914,0.00008872576],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981634,0.00025201074,0.0004432734,0.00061123475,0.000071986826,0.00045807727],"domain_scores_gemma":[0.9990216,0.00006400842,0.00022726816,0.00055631355,0.00004214274,0.000088672605],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00050136994,0.00026942266,0.00036729,0.00011777634,0.000099439174,0.00002121232,0.00040773337,0.0003300221,0.00028372623],"category_scores_gemma":[0.00023283919,0.0002704314,0.000099726494,0.0003328231,0.00024282697,0.00007176499,0.00017312344,0.0005242635,0.0000028201034],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003275653,0.000072538125,0.003268039,0.0000349585,0.000019047615,0.000012896208,0.00005421647,0.0000051430693,0.98966926,0.0060949735,0.0000034781324,0.00073266734],"study_design_scores_gemma":[0.00018844928,0.000033062217,0.00001170057,0.000021514807,0.000008609288,0.000009408768,0.00007462352,0.0003607864,0.8729757,0.12563407,0.00041203285,0.00027005607],"about_ca_topic_score_codex":0.00004488491,"about_ca_topic_score_gemma":4.949561e-7,"teacher_disagreement_score":0.119930156,"about_ca_system_score_codex":0.00010490097,"about_ca_system_score_gemma":0.000061514715,"threshold_uncertainty_score":0.9999748},"labels":[],"label_agreement":null},{"id":"W7382634","doi":"10.1007/978-1-61779-821-4_4","title":"Protein Solubilization: Attend to the Choice of Lysis Buffer","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":29,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Lysis; Lysis buffer; Buffer (optical fiber); Solubilization; Thiourea; Chemistry; Urea; Extraction (chemistry); Chromatography; Biochemistry; Computer science; Organic chemistry","score_opus":0.033844539228261965,"score_gpt":0.42566543220754904,"score_spread":0.39182089297928707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W7382634","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.045822397,0.00025433075,0.9515375,0.0006084509,0.00001618877,0.0002483673,0.0000067438746,0.00002448155,0.0014815191],"genre_scores_gemma":[0.07610179,0.0000069666094,0.92290574,0.00020641359,0.000048886035,0.00055532757,0.000009948832,0.00001361125,0.0001513085],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992199,0.00015609612,0.00021429271,0.00016961133,0.000038069556,0.00020203565],"domain_scores_gemma":[0.9992829,0.00010514714,0.0000794428,0.0004576052,0.000037494636,0.000037412046],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00049927767,0.00008854554,0.00015171831,0.000037978047,0.00003319063,0.0000027378637,0.00025226464,0.00011690144,0.00011578187],"category_scores_gemma":[0.00032913688,0.000066898036,0.000050428596,0.00023246196,0.000061427854,0.000015278023,0.00012942043,0.000127587,0.0000037262498],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000034988511,0.000031376814,0.0024173174,0.000012016689,0.0000081717835,9.458175e-8,0.000046054334,0.00003291794,0.970265,0.016776254,0.000010652305,0.010396659],"study_design_scores_gemma":[0.000059305345,0.0000099558365,0.00007901802,0.000008511588,0.000007746724,0.0000011519527,0.000016116735,0.00007408943,0.96102905,0.0089055775,0.029729744,0.000079710444],"about_ca_topic_score_codex":0.000028109156,"about_ca_topic_score_gemma":0.0000046282835,"teacher_disagreement_score":0.030279392,"about_ca_system_score_codex":0.000024877983,"about_ca_system_score_gemma":0.000009334865,"threshold_uncertainty_score":0.27280226},"labels":[],"label_agreement":null},{"id":"W74454885","doi":"10.1007/978-1-60327-853-9_29","title":"Role of Horizontal Gene Transfer in the Evolution of Photosynthetic Eukaryotes and Their Plastids","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Plastid; Biology; Endosymbiosis; Horizontal gene transfer; Lineage (genetic); Gene; Genome; Genetics; Evolutionary biology; Chloroplast","score_opus":0.017865483061153833,"score_gpt":0.3327520974604478,"score_spread":0.314886614399294,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W74454885","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.019179758,0.9528332,0.027196141,0.000005422212,0.000052337757,0.00048067654,0.000078809666,9.36394e-7,0.00017275951],"genre_scores_gemma":[0.026659135,0.94027305,0.032876346,0.000015758726,0.00003553046,0.00006875037,0.000044800894,0.000025001958,0.000001621704],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9971416,0.0014995195,0.00061764993,0.00044521317,0.000047012178,0.00024898368],"domain_scores_gemma":[0.9992387,0.00017226416,0.00013956941,0.00039419477,0.000032353582,0.000022904922],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009838864,0.00033679893,0.0011029699,0.0001797054,0.000019765625,0.0000033073136,0.00036427236,0.0004718404,0.00000140968],"category_scores_gemma":[0.00012042972,0.00022382752,0.0002818047,0.00020766116,0.00025830365,3.7273443e-7,0.0001064613,0.00019609158,1.2887139e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00001703482,0.000055044453,0.00007693003,0.00030343852,0.00008639165,9.68964e-7,0.00009659122,0.0000020395898,0.71170217,0.0005932197,3.8109738e-7,0.2870658],"study_design_scores_gemma":[0.0014145391,0.0037585397,0.00074844214,0.0017091401,0.0006793275,0.00025383243,0.0008420788,0.00003437229,0.7739362,0.01658483,0.19863798,0.0014007128],"about_ca_topic_score_codex":0.00008052114,"about_ca_topic_score_gemma":0.000051084273,"teacher_disagreement_score":0.2856651,"about_ca_system_score_codex":0.000021671636,"about_ca_system_score_gemma":0.000110363835,"threshold_uncertainty_score":0.91274214},"labels":[],"label_agreement":null},{"id":"W74498408","doi":"10.1007/978-1-60761-247-6_2","title":"Evaluating Micro- and Macro-vascular Disease, the End Stage of Atherosclerosis, in Rat Models","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Adipokines, Inflammation, and Metabolic Diseases","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Disease; Hyperinsulinemia; Hyperlipidemia; Animal model; Diabetes mellitus; Bioinformatics; Vascular disease; Medicine; Biology; Genetic model; Kidney disease; Pathology; Internal medicine; Endocrinology; Insulin resistance; Genetics; Gene","score_opus":0.09865469363215763,"score_gpt":0.46096523768976455,"score_spread":0.36231054405760693,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W74498408","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0010158125,0.95467305,0.042403705,0.000036164554,0.000106874795,0.0015717187,0.00006113703,0.000014592692,0.00011692316],"genre_scores_gemma":[0.000012955187,0.83715963,0.16213198,0.00016733303,0.000054942422,0.00017483934,0.00013744066,0.000042026673,0.00011881467],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99402636,0.003779468,0.0010471274,0.0005941802,0.00018304186,0.0003697913],"domain_scores_gemma":[0.9981455,0.0004623412,0.00041937758,0.0007605781,0.000079830366,0.0001323534],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00324033,0.0004348203,0.0020273062,0.00035618868,0.000037166214,0.000011751181,0.00026798798,0.00033268807,0.000038640654],"category_scores_gemma":[0.0010733333,0.0002879412,0.00045946697,0.00045084252,0.00031969248,0.000031249634,0.0001221171,0.0003893397,0.0000010466443],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031360054,0.00009945369,0.00016444527,0.004599694,0.00014694418,0.000017556462,0.00009068214,0.00007822846,0.0051208558,0.002004972,0.0000032564797,0.9876425],"study_design_scores_gemma":[0.003535974,0.00036251658,0.0014040726,0.014455967,0.005242354,0.000040208055,0.000078834666,0.0014999459,0.0012692261,0.012377019,0.95861113,0.0011227551],"about_ca_topic_score_codex":0.000061103536,"about_ca_topic_score_gemma":0.000007976653,"teacher_disagreement_score":0.9865198,"about_ca_system_score_codex":0.0000611468,"about_ca_system_score_gemma":0.00042683986,"threshold_uncertainty_score":0.99995726},"labels":[],"label_agreement":null},{"id":"W74941160","doi":"10.1007/978-1-59745-062-1_10","title":"Erwinia amylovora: Modern Methods for Detection and Differentiation","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"","keywords":"Erwinia; Fire blight; Biology; Bacteria; Genetics","score_opus":0.04448231484643366,"score_gpt":0.35383702500375114,"score_spread":0.30935471015731747,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W74941160","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46620268,0.00046884097,0.5328785,0.00009563294,0.00011805369,0.00017008063,0.000012374199,0.000021741173,0.000032062417],"genre_scores_gemma":[0.2580671,0.00016598043,0.7414485,0.000115580355,0.00005326866,0.00010171847,0.000025990068,0.0000014516579,0.00002040531],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9981506,0.0010285308,0.00021007335,0.0003465649,0.00002840884,0.00023583445],"domain_scores_gemma":[0.9991617,0.0006420186,0.0000774035,0.00004943707,0.000033814056,0.00003561999],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00078818644,0.0001340642,0.0002647613,0.000026707987,0.00013270021,0.000008150938,0.00010123559,0.00017125704,0.000009493596],"category_scores_gemma":[0.00037386702,0.000059844333,0.00006705685,0.0001468719,0.00007061022,0.000028402344,0.00008232629,0.00008816739,6.023819e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022380334,0.000012880947,0.0012967027,0.0000025453542,0.000011168624,0.0000010118337,0.00003875456,4.879585e-7,0.69904613,0.00008580179,9.622756e-7,0.29948118],"study_design_scores_gemma":[0.0004318596,0.00041423264,0.1659303,0.0000075333583,0.000031922802,0.000076465476,0.000037716203,0.0036610307,0.7972192,0.026458276,0.005394934,0.00033651284],"about_ca_topic_score_codex":0.000032482945,"about_ca_topic_score_gemma":0.000072631214,"teacher_disagreement_score":0.2991447,"about_ca_system_score_codex":0.000017869219,"about_ca_system_score_gemma":0.0000032482499,"threshold_uncertainty_score":0.2440381},"labels":[],"label_agreement":null},{"id":"W75432311","doi":"10.1007/978-1-62703-128-8_12","title":"Isolation and Characterization of Cancer Stem Cells In Vitro","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Ontario Institute for Cancer Research","funders":"","keywords":"Cancer stem cell; Cancer; Cancer cell; Biology; In vitro; Metastasis; Computational biology; Cancer cell lines; Stem cell; In vivo; Cell culture; Cancer research; Neuroscience; Cell biology; Biotechnology; Genetics","score_opus":0.02873993351789922,"score_gpt":0.3908694017791815,"score_spread":0.3621294682612823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W75432311","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.702497,0.0015531856,0.29546982,0.00008920921,0.00016827343,0.00014518877,0.000008787725,0.000003025662,0.00006547191],"genre_scores_gemma":[0.6868632,0.0005380956,0.31221694,0.00024401429,0.000039892504,0.00002842801,0.000016834594,0.000010233169,0.000042372463],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9992422,0.00028893634,0.00018921676,0.000112931724,0.00002812803,0.00013860619],"domain_scores_gemma":[0.99975765,0.000031034415,0.00006764326,0.000091671696,0.000018116882,0.00003391556],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053520355,0.000061698556,0.00022976112,0.00012873803,0.0000045155743,0.000001069947,0.000019698156,0.00008304461,0.000021551929],"category_scores_gemma":[0.000012887388,0.00005499366,0.000023617697,0.00015451261,0.000041721494,0.000019985782,0.000020792095,0.00007326522,3.3304235e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007632485,0.000030425981,0.024957137,0.000038494152,0.000008855776,8.8087364e-7,0.00014437012,8.401771e-7,0.8397509,0.00008836571,2.7195182e-7,0.13490318],"study_design_scores_gemma":[0.00047142882,0.00003619372,0.01932633,0.000018719547,0.000023947352,0.0000021505023,0.000019525787,0.000114264054,0.9783366,0.00004303604,0.0015610447,0.00004680772],"about_ca_topic_score_codex":0.00013641428,"about_ca_topic_score_gemma":0.0000068122263,"teacher_disagreement_score":0.13858569,"about_ca_system_score_codex":0.000033308283,"about_ca_system_score_gemma":0.000019594278,"threshold_uncertainty_score":0.22425763},"labels":[],"label_agreement":null},{"id":"W77265774","doi":"10.1007/978-1-62703-526-2_3","title":"Single-Molecule Resolution Fluorescent In Situ Hybridization (smFISH) in the Yeast S. cerevisiae","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene Regulatory Network Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"In situ hybridization; Gene expression; Biology; RNA; Yeast; Cell biology; In situ; Context (archaeology); Molecular biology; DNA; Saccharomyces cerevisiae; Fluorescence in situ hybridization; Fluorescence; Computational biology; Cell; Gene; Single-cell analysis; Chemistry; Biochemistry; Chromosome","score_opus":0.015454702991797813,"score_gpt":0.3159296412762041,"score_spread":0.3004749382844063,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W77265774","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7123233,0.0022379402,0.28352672,0.00047751324,0.00010171823,0.00053800474,0.0000021731373,0.0000092710325,0.0007833818],"genre_scores_gemma":[0.9120056,0.00013011138,0.086768486,0.00065794436,0.0000845101,0.00013389048,0.00016333534,0.000030450854,0.000025673775],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9953555,0.0028855512,0.00052724325,0.0006207437,0.00011715467,0.00049384916],"domain_scores_gemma":[0.9990515,0.000041009454,0.00013084985,0.00065915385,0.00006699256,0.00005046881],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0015253474,0.00024327206,0.00031466025,0.0002729946,0.000035057554,0.000031130712,0.0004390152,0.00031247872,0.000021777005],"category_scores_gemma":[0.0003525102,0.000209441,0.00013155035,0.00071979844,0.00013267931,0.000006040912,0.00017258785,0.00023275695,0.000011294737],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018411682,0.00012163175,0.007938835,0.000009319718,0.000018919385,0.000012024793,0.00006112102,0.0013473843,0.97852206,0.00023680994,0.00015548732,0.011557995],"study_design_scores_gemma":[0.0011845676,0.00032401521,0.029724574,0.000046803045,0.000035837824,0.000037063477,0.0002023666,0.0034054613,0.9543759,0.003053755,0.007036224,0.00057338644],"about_ca_topic_score_codex":0.00016638485,"about_ca_topic_score_gemma":0.00036894745,"teacher_disagreement_score":0.19968231,"about_ca_system_score_codex":0.00008078286,"about_ca_system_score_gemma":0.000046910547,"threshold_uncertainty_score":0.8540756},"labels":[],"label_agreement":null},{"id":"W77327250","doi":"10.1007/978-1-61779-934-1_5","title":"Opiate Screening and Quantitation in Urine/Blood Matrices Using LC-MS/MS Techniques","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Forensic Toxicology and Drug Analysis","field":"Pharmacology, Toxicology and Pharmaceutics","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Saskatchewan Disease Control Laboratory; Saskatchewan Health","funders":"","keywords":"Chromatography; Forensic toxicology; Sample preparation; Electrospray ionization; Liquid chromatography–mass spectrometry; Urine; Chemistry; Pharmacokinetics; Opiate; Solid phase extraction; Tandem mass spectrometry; Clinical toxicology; Mass spectrometry; Pharmacology; Medicine; Toxicology","score_opus":0.12315378800505809,"score_gpt":0.530282889957006,"score_spread":0.4071291019519479,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W77327250","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.69088286,0.005802041,0.30177018,0.00022361416,0.0003159052,0.00023808598,0.0000071456734,0.000056552155,0.0007036067],"genre_scores_gemma":[0.37765586,0.00032922454,0.6210627,0.0007909247,0.00007746598,0.0000249454,0.000014757855,0.00001857763,0.000025551897],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9947887,0.0036961606,0.0004900042,0.00036702392,0.00005219882,0.0006058847],"domain_scores_gemma":[0.9988009,0.0006896578,0.00017986866,0.00017652716,0.00003675415,0.000116299096],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0041822228,0.00023539663,0.00046211982,0.00062410434,0.00010744452,0.000009305624,0.00017230777,0.00072417443,0.00014059365],"category_scores_gemma":[0.00043731564,0.00023033998,0.00008641439,0.0005724698,0.00034529218,0.000112011716,0.00015294545,0.0007356711,0.000004600155],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012770531,0.00023961483,0.25226074,0.00003878808,0.00017943222,0.000049235336,0.00051442446,0.00034445847,0.69500667,0.010226768,0.000010827993,0.041001335],"study_design_scores_gemma":[0.0023989335,0.0003218843,0.01812431,0.00005524122,0.0006613418,0.00018197625,0.0003395919,0.012936676,0.943267,0.01166039,0.009256585,0.0007960658],"about_ca_topic_score_codex":0.0002619429,"about_ca_topic_score_gemma":0.00007385976,"teacher_disagreement_score":0.31929252,"about_ca_system_score_codex":0.000036607682,"about_ca_system_score_gemma":0.000026664555,"threshold_uncertainty_score":0.93929917},"labels":[],"label_agreement":null},{"id":"W776061466","doi":"10.1007/978-1-59745-190-1_16","title":"Biochemical Analysis of Arginine Methylation in Transcription","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer-related gene regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Methylation; Arginine; Psychological repression; Biochemistry; Methionine; Biology; Transcription (linguistics); Enzyme; Cell biology; Transcription factor; Gene expression; Chemistry; Gene; Amino acid","score_opus":0.013764508186112865,"score_gpt":0.3750167962530451,"score_spread":0.36125228806693227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W776061466","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.49037865,0.0012457018,0.50791883,0.00012439094,0.000051921448,0.00011316976,0.000004767404,0.0000045284664,0.00015803271],"genre_scores_gemma":[0.8040384,0.000108405366,0.19538099,0.00009536864,0.000025445555,0.00001151223,0.00031440967,0.000008552953,0.000016898013],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99823254,0.00062271487,0.00046167517,0.00040823533,0.00006613539,0.00020869043],"domain_scores_gemma":[0.9994519,0.00002674969,0.00012331385,0.0003136316,0.000051993087,0.00003246177],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00086752616,0.00014262556,0.00035664305,0.0006100942,0.000009164839,0.0000030315332,0.00013189597,0.0003927019,0.000016193651],"category_scores_gemma":[0.00018946221,0.00015241762,0.00017838377,0.0012077377,0.00006954188,0.0000026569041,0.000020412159,0.0001224211,3.5973966e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0001044301,0.00006414186,0.0019627179,0.0000037205048,0.000111757305,9.833417e-7,0.00004008353,0.006743472,0.96779656,0.0005564293,0.000005641179,0.022610035],"study_design_scores_gemma":[0.0005761019,0.0002222053,0.023412216,0.0000074381383,0.00012877761,0.0000016539485,0.000011445266,0.0042233546,0.96907365,0.0016508497,0.0005400074,0.00015231557],"about_ca_topic_score_codex":0.000037069593,"about_ca_topic_score_gemma":0.000048188485,"teacher_disagreement_score":0.31365976,"about_ca_system_score_codex":0.000040422692,"about_ca_system_score_gemma":0.00003348397,"threshold_uncertainty_score":0.62154096},"labels":[],"label_agreement":null},{"id":"W78327381","doi":"10.1007/978-1-61737-988-8_17","title":"The Use of Zygotic Embryos as Explants for In Vitro Propagation: An Overview","year":2010,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Plant tissue culture and regeneration","field":"Biochemistry, Genetics and Molecular Biology","cited_by":38,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Explant culture; Zygote; Embryo; Somatic embryogenesis; Organogenesis; Biology; Somatic cell; Cell biology; Embryo culture; In vitro; Embryogenesis; Andrology; Genetics; Medicine","score_opus":0.14638413062059258,"score_gpt":0.45765105279149465,"score_spread":0.31126692217090207,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W78327381","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00013376026,0.948979,0.049131203,0.000026992324,0.00036918742,0.001251302,0.00008682359,0.0000046673945,0.000017028216],"genre_scores_gemma":[0.0000032881521,0.85401404,0.14331324,0.0000749208,0.00012972951,0.00040754792,0.0018234253,0.000035140805,0.00019866227],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9966278,0.0017808542,0.00068155664,0.00054830156,0.000060876042,0.00030063317],"domain_scores_gemma":[0.9986855,0.0002105099,0.0003511583,0.0006246344,0.0000792247,0.00004897048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010989874,0.00032327615,0.00087112555,0.00011328207,0.000056516998,0.000023039562,0.00041511806,0.0009791342,0.0000021297362],"category_scores_gemma":[0.0008674822,0.00020857355,0.00025563227,0.00017054433,0.0001371932,0.00000463878,0.00009721854,0.0003015852,0.0000013843448],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003483418,0.00003537816,0.0000011747928,0.00055951835,0.000038063354,0.0000047948524,0.0000093604185,0.0000035509986,0.45314234,0.00052354584,0.00003059951,0.54561687],"study_design_scores_gemma":[0.00019056279,0.00017191382,5.903271e-7,0.00031835074,0.00008331803,0.000065488006,0.000003655654,0.00002553893,0.13522936,0.00020293267,0.8634851,0.00022319176],"about_ca_topic_score_codex":0.000057015495,"about_ca_topic_score_gemma":0.0003579964,"teacher_disagreement_score":0.8634545,"about_ca_system_score_codex":0.000020674503,"about_ca_system_score_gemma":0.0003055983,"threshold_uncertainty_score":0.85053825},"labels":[],"label_agreement":null},{"id":"W78760022","doi":"10.1007/978-1-61779-376-9_13","title":"Transcriptional Regulation of Genes via Hypoxia-Inducible Factor","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer, Hypoxia, and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Gene; Hypoxia (environmental); Hypoxia-inducible factors; Biology; Computational biology; Genetics; Cell biology; Chemistry; Oxygen","score_opus":0.044223878251717245,"score_gpt":0.34656949555682187,"score_spread":0.3023456173051046,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W78760022","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2056678,0.0059595476,0.786148,0.000019182553,0.00095595245,0.00019273469,0.000025453544,0.000010024284,0.0010213004],"genre_scores_gemma":[0.3111261,0.00045015078,0.68751514,0.00018014428,0.00033725545,0.000051088413,0.00010043117,0.00003565283,0.00020400572],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99821365,0.00056608854,0.00039203087,0.00046254913,0.00007799929,0.00028765394],"domain_scores_gemma":[0.9992627,0.000018425695,0.00013163817,0.0004292911,0.000093600356,0.000064335676],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00053321535,0.00019189925,0.00031036075,0.00015396663,0.000027336535,0.0000031637085,0.00023473334,0.00035402388,0.000149021],"category_scores_gemma":[0.00010057892,0.00018922129,0.00017331816,0.00017339655,0.0001736472,0.0000041693656,0.000064377324,0.000110569774,0.0000026533635],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009700771,0.00007330001,0.0011277073,0.000013797674,0.000048909587,5.813423e-7,0.00009514702,0.000013526225,0.94656837,0.0018986405,0.000019002326,0.050043985],"study_design_scores_gemma":[0.0005460296,0.00019155229,0.014922291,0.000005536604,0.000022043321,0.000013915949,0.000017960658,0.000034006385,0.9495893,0.0050391057,0.029418366,0.00019990464],"about_ca_topic_score_codex":0.00010758765,"about_ca_topic_score_gemma":0.00002903905,"teacher_disagreement_score":0.105458304,"about_ca_system_score_codex":0.0000120598515,"about_ca_system_score_gemma":0.00007547213,"threshold_uncertainty_score":0.77162206},"labels":[],"label_agreement":null},{"id":"W78948126","doi":"10.1007/978-1-62703-336-7_32","title":"Protocol for the Preparation of Stimuli-Responsive Gold Nanoparticles Capped with Elastin-Based Pentapeptides","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Supramolecular Self-Assembly in Materials","field":"Materials Science","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Pentapeptide repeat; Colloidal gold; Nanoparticle; Nanotechnology; Ligand (biochemistry); Materials science; Drug delivery; Combinatorial chemistry; Chemistry; Biophysics; Peptide; Receptor; Biochemistry; Biology","score_opus":0.0420055060499094,"score_gpt":0.4354620979998607,"score_spread":0.3934565919499513,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W78948126","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4114542,0.000012384895,0.53378147,0.00014632913,0.00008297565,0.054451622,0.00000775607,0.00003301242,0.000030251136],"genre_scores_gemma":[0.11454568,1.6868815e-7,0.68321073,0.00021374508,0.000017329938,0.20196973,0.000004194277,0.00002588846,0.00001253778],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99616796,0.0023349193,0.00053797837,0.0004320641,0.00013992163,0.00038712934],"domain_scores_gemma":[0.9970959,0.001744978,0.00032998572,0.0005333565,0.0002499126,0.00004590407],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0021457495,0.00022128156,0.0003762895,0.00010293401,0.00006048577,0.000059609323,0.0003677512,0.00013462995,0.00020894654],"category_scores_gemma":[0.0012805901,0.00013825782,0.000071199596,0.00021379924,0.00029858664,0.000068657675,0.000083880106,0.000070001435,0.000020708541],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00072811136,0.000081193306,0.00030024786,0.00006123409,0.000017180155,0.0000032149487,0.00009888907,0.0024181046,0.9949236,0.00069927936,0.000045918227,0.00062301435],"study_design_scores_gemma":[0.0013561002,0.0008633649,0.00041743685,0.0000395455,0.000027124895,0.000006118573,0.00007275034,0.0030282596,0.99123627,0.0022792108,0.00049986056,0.00017396112],"about_ca_topic_score_codex":0.00015977946,"about_ca_topic_score_gemma":0.00002395368,"teacher_disagreement_score":0.29690853,"about_ca_system_score_codex":0.00003988403,"about_ca_system_score_gemma":0.00014398155,"threshold_uncertainty_score":0.563799},"labels":[],"label_agreement":null},{"id":"W79268409","doi":"10.1007/978-1-59745-493-3_12","title":"Top-Down Proteomics on a High-field Fourier Transform Ion Cyclotron Resonance Mass Spectrometer","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mass Spectrometry Techniques and Applications","field":"Chemistry","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Genome British Columbia; University of Victoria","funders":"National Center for Research Resources; U.S. Public Health Service","keywords":"Fourier transform ion cyclotron resonance; Mass spectrometry; Top-down proteomics; Proteomics; Chemistry; Ion cyclotron resonance; Gene isoform; Protein mass spectrometry; Analytical Chemistry (journal); Selected ion monitoring; Cyclotron; Ion; Chromatography; Tandem mass spectrometry; Biochemistry","score_opus":0.011024312438038163,"score_gpt":0.3448432091157137,"score_spread":0.33381889667767556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W79268409","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04226426,0.0001593069,0.9127523,0.0036441602,0.000042477433,0.00033587668,0.000013002547,0.00013669879,0.040651936],"genre_scores_gemma":[0.09300956,0.000101752856,0.90537834,0.00084646087,0.000084277075,0.00019838026,0.000021541802,0.000022301776,0.00033741092],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984309,0.00014129236,0.0003479354,0.00053760177,0.00009848296,0.00044379558],"domain_scores_gemma":[0.9990603,0.00013133071,0.00008943967,0.0006334261,0.000022492912,0.00006303237],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00046763296,0.00023673325,0.000338199,0.00016934884,0.000050076986,0.000017190847,0.000351184,0.00038151743,0.000758851],"category_scores_gemma":[0.00013643356,0.00022074845,0.00013067218,0.0003244725,0.00004510923,0.000021361659,0.000024824694,0.0005353109,0.00000564465],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006253212,0.00007947818,0.000078623394,0.000008868967,0.000007577749,0.000010904239,0.000012568423,0.0000023090001,0.83134437,0.09084364,0.00003510282,0.077514015],"study_design_scores_gemma":[0.00027236732,0.00032330063,0.00006291592,0.000018792824,0.000008298573,0.0000066621546,0.0000041339613,0.00014340896,0.7548165,0.23229562,0.011858237,0.00018979858],"about_ca_topic_score_codex":0.0000337272,"about_ca_topic_score_gemma":0.0000029831003,"teacher_disagreement_score":0.14145197,"about_ca_system_score_codex":0.00012585588,"about_ca_system_score_gemma":0.000022434002,"threshold_uncertainty_score":0.90018606},"labels":[],"label_agreement":null},{"id":"W79313591","doi":"10.1007/978-1-60327-815-7_32","title":"Computational Methods to Study Kinetics of DNA Replication","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"DNA Repair Mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Simon Fraser University","funders":"","keywords":"Replication (statistics); DNA replication; DNA; Computer science; Chromosome; Population; Biology; Genetics; Mathematics; Statistics; Medicine; Gene","score_opus":0.025745990946944058,"score_gpt":0.4335570935519917,"score_spread":0.4078111026050476,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W79313591","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.26294988,0.00014706852,0.7359303,0.0001459432,0.00008142181,0.00043040866,0.0000039152824,0.0000128662095,0.00029816886],"genre_scores_gemma":[0.26907495,0.0000034282662,0.73021394,0.00057078956,0.000022387358,0.00003539409,0.000039787094,0.000014151497,0.000025187035],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9965692,0.0019288904,0.000488385,0.00067932665,0.00008937603,0.0002447794],"domain_scores_gemma":[0.99872935,0.00007352627,0.00013958802,0.0008519446,0.00013252092,0.00007306119],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002070167,0.00018045207,0.00031029835,0.00017137424,0.00001833777,0.0000058300543,0.00035150812,0.00020293736,0.00001145989],"category_scores_gemma":[0.0010535915,0.00018568202,0.00009319805,0.00033099757,0.00004767193,0.000001469001,0.00015317366,0.000098243225,0.0000020275652],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000051284493,0.00032059694,0.00036246955,0.0000027788933,0.000031821033,0.0000027897017,0.00007294992,0.0007627808,0.8952208,0.0018833438,0.000011697625,0.10127665],"study_design_scores_gemma":[0.00046697032,0.002253778,0.0033387654,0.0000038878457,0.000018264234,0.000010096936,0.00005130101,0.00026331603,0.97293967,0.019320648,0.001153688,0.00017963997],"about_ca_topic_score_codex":0.000006304196,"about_ca_topic_score_gemma":0.0000020990074,"teacher_disagreement_score":0.10109701,"about_ca_system_score_codex":0.000019677966,"about_ca_system_score_gemma":0.000026610998,"threshold_uncertainty_score":0.7571893},"labels":[],"label_agreement":null},{"id":"W8008330","doi":"10.1007/978-1-60327-853-9_11","title":"Detection and Quantitative Assessment of Horizontal Gene Transfer","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":26,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"Canadian Institutes of Health Research","keywords":"Horizontal gene transfer; Prokaryote; Genome; Gene transfer; Gene; Computational biology; Biology; Horizontal and vertical; Genetics; Geography; Geodesy","score_opus":0.021144162461596706,"score_gpt":0.38786806459566675,"score_spread":0.36672390213407,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W8008330","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5141349,0.0013431492,0.48412627,0.000029112174,0.000048431644,0.00008472718,0.0000052172227,9.648514e-7,0.00022720601],"genre_scores_gemma":[0.6224295,0.0002569735,0.37721187,0.00006865642,0.000012007298,0.000007814686,0.0000052028067,0.0000051462966,0.0000028289055],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9989547,0.0003536066,0.0002128061,0.00028872644,0.000032022544,0.0001581369],"domain_scores_gemma":[0.9997154,0.000025704278,0.000035429566,0.00015505627,0.000039901057,0.000028530978],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00045035247,0.00012125202,0.00021314758,0.00006598022,0.000025278594,0.000003215862,0.00007821206,0.00013716055,0.0000015352458],"category_scores_gemma":[0.00005632699,0.00011494851,0.000059196125,0.00007753304,0.00010086223,3.8765484e-7,0.00003747,0.000070711016,8.6721165e-8],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003516078,0.000033857712,0.0016844516,0.0000040031528,0.000038095513,0.000001512598,0.000038877286,0.0000247927,0.9709312,0.0023558317,4.2534873e-7,0.024851836],"study_design_scores_gemma":[0.00042328922,0.0015368201,0.025379421,0.0000027682856,0.00001536983,0.000009331692,0.0000460247,0.00014175828,0.968542,0.0033138937,0.0004623511,0.00012696932],"about_ca_topic_score_codex":0.000016847971,"about_ca_topic_score_gemma":0.00002027072,"teacher_disagreement_score":0.10829459,"about_ca_system_score_codex":0.00000802763,"about_ca_system_score_gemma":0.00002212141,"threshold_uncertainty_score":0.46874642},"labels":[],"label_agreement":null},{"id":"W80518678","doi":"10.1007/978-1-61779-376-9_16","title":"Chromatin Affinity Purification","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre","funders":"","keywords":"Chromatin; Computational biology; Computer science; Cell biology; Biology; Chemistry; Genetics; DNA","score_opus":0.02722708393453869,"score_gpt":0.34166636173368964,"score_spread":0.31443927779915093,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W80518678","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.40222275,0.00033747283,0.5912859,0.000027131842,0.00014714294,0.00014546809,0.0000062381773,0.000012621145,0.005815292],"genre_scores_gemma":[0.28704143,0.00006263145,0.7124688,0.00019110876,0.000031397485,0.00004108969,0.00007348354,0.000021559757,0.00006850758],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984094,0.0005513494,0.0003063208,0.00041448983,0.000038166352,0.00028030056],"domain_scores_gemma":[0.99925023,0.000016239497,0.00011110453,0.00052291766,0.000043575663,0.000055952743],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007921474,0.00016577315,0.00018625501,0.00008302903,0.000035310426,0.0000072538783,0.0003220309,0.0002850518,0.000054960477],"category_scores_gemma":[0.00017939798,0.00016820541,0.00008587042,0.00013032768,0.00011085238,0.0000015370913,0.00014939421,0.00012215252,0.00001241798],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000019633342,0.00007162307,0.003004346,0.000007579925,0.00002108338,0.000003904653,0.00007615068,0.000012145832,0.9845957,0.004693399,0.000020090174,0.0074743545],"study_design_scores_gemma":[0.00039545863,0.00024991535,0.0076134913,0.0000051021607,0.00001123178,0.000020148389,0.00005372345,0.000358202,0.974915,0.013076768,0.003022034,0.00027890634],"about_ca_topic_score_codex":0.00003981759,"about_ca_topic_score_gemma":0.000023310777,"teacher_disagreement_score":0.1211829,"about_ca_system_score_codex":0.000017965773,"about_ca_system_score_gemma":0.000046899993,"threshold_uncertainty_score":0.6859217},"labels":[],"label_agreement":null},{"id":"W80576706","doi":"10.1007/978-1-4939-2428-8_27","title":"Evidence-Based Decision-Making 5: Translational Research","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Health and Medical Research Impacts","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Memorial University of Newfoundland","funders":"","keywords":"Translational research; Computer science; Psychology; Medicine","score_opus":0.6367092524416333,"score_gpt":0.6867477479200569,"score_spread":0.05003849547842354,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W80576706","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.015743475,0.004221186,0.9573179,0.020184193,0.00015250487,0.0004761534,0.0000016943989,0.0000201066,0.001882797],"genre_scores_gemma":[0.10635663,0.000081559614,0.8871753,0.006192617,0.000096330026,0.00004828509,0.0000059790696,0.000014303639,0.000028967956],"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","domain_scores_codex":[0.99385023,0.003776355,0.00035478486,0.00034103647,0.00070838555,0.0009692247],"domain_scores_gemma":[0.987786,0.00886864,0.00003347592,0.00040333383,0.00050734385,0.0024011824],"candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.028707102,0.00009793571,0.0003017346,0.00058831746,0.000042199255,0.000009052665,0.00017569946,0.0002618652,0.00016807979],"category_scores_gemma":[0.31148496,0.000075414195,0.00006354757,0.0008473121,0.00030606444,0.00003426647,0.000051130504,0.00085224316,0.00003633743],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":true,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0012553957,0.00012780448,0.0075014657,0.00007426633,0.000011631356,0.0003956762,0.0001362304,0.00004366508,0.06405939,0.0020204338,0.0013570928,0.92301697],"study_design_scores_gemma":[0.016736738,0.0112744225,0.019549584,0.009533048,0.00006619963,0.00032597102,0.00050031993,0.039417874,0.09282842,0.489606,0.31924108,0.00092034304],"about_ca_topic_score_codex":0.000048502923,"about_ca_topic_score_gemma":0.0000077812665,"teacher_disagreement_score":0.9220966,"about_ca_system_score_codex":0.00021901146,"about_ca_system_score_gemma":0.006933453,"threshold_uncertainty_score":0.9986963},"labels":[],"label_agreement":null},{"id":"W80928204","doi":"10.1007/978-1-62703-556-9_20","title":"Epigenetic Biomarker to Determine Replicative Senescence of Cultured Cells","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Telomeres, Telomerase, and Senescence","field":"Medicine","cited_by":22,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"RWTH Aachen University; Stem Cell Network","keywords":"dNaM; Epigenetics; DNA methylation; Senescence; Biology; CpG site; Population; Mesenchymal stem cell; Bisulfite sequencing; Methylation; Biomarker; Cell biology; Somatic cell; Genetics; DNA; Gene expression; Gene; Medicine","score_opus":0.03630946545165054,"score_gpt":0.3999526686490411,"score_spread":0.3636432031973906,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W80928204","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.28798172,0.0007186818,0.7089112,0.0007221413,0.00016505913,0.0009048599,0.000006581097,0.000031413594,0.0005583667],"genre_scores_gemma":[0.14549318,0.00007367895,0.853073,0.0009666747,0.000019961255,0.00010762346,0.000009339514,0.00002177448,0.00023479316],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977627,0.00070089154,0.000504051,0.0005558573,0.00009843127,0.0003781075],"domain_scores_gemma":[0.99858403,0.00020780135,0.00012978718,0.00071581855,0.00018497447,0.00017757725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005743189,0.00021201,0.0005677904,0.00025001593,0.000020982452,0.0000051589464,0.00023214122,0.00020873698,0.0001415128],"category_scores_gemma":[0.0007355326,0.00017069507,0.000109216555,0.0005999869,0.00021844162,0.000018832086,0.000114470255,0.00015401749,0.000043584958],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004756712,0.000080457794,0.0048054187,0.000039581013,0.00002668886,0.00002418424,0.00021311373,0.0000021249014,0.90090364,0.00007990941,0.00006357612,0.093713745],"study_design_scores_gemma":[0.00045601765,0.00037811414,0.018268846,0.00006035149,0.000025545494,0.00003098714,0.00007728526,0.00019033844,0.97787935,0.0006945826,0.0017571271,0.00018148887],"about_ca_topic_score_codex":0.00023339904,"about_ca_topic_score_gemma":0.000008260448,"teacher_disagreement_score":0.14416179,"about_ca_system_score_codex":0.000039212006,"about_ca_system_score_gemma":0.000052069274,"threshold_uncertainty_score":0.6960743},"labels":[],"label_agreement":null},{"id":"W81456596","doi":"10.1007/978-1-62703-281-0_16","title":"Comparative Genomic Hybridization of Wilms’ tumor","year":2013,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Renal and related cancers","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Child and Family Research Institute; University of British Columbia; BC Children's Hospital","funders":"","keywords":"Comparative genomic hybridization; Wilms' tumor; Karyotype; Biology; Cytogenetics; Chromosome; Genome; Copy number analysis; Genetics; Computational biology; Copy-number variation; Gene","score_opus":0.045754454305278025,"score_gpt":0.4366472208211386,"score_spread":0.3908927665158606,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W81456596","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019164605,0.88010734,0.11801396,0.0000044059216,0.00027401224,0.0006482366,0.000028527702,0.0000062033264,0.00072568335],"genre_scores_gemma":[0.000012734406,0.8566259,0.14251293,0.00005484151,0.00006833866,0.00015569052,0.00038579878,0.000041098992,0.00014267152],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99647343,0.0017525323,0.0007903142,0.0006153497,0.000057725338,0.00031065222],"domain_scores_gemma":[0.9987665,0.00006189963,0.0005548754,0.00047649295,0.00007758535,0.00006268002],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005023735,0.00040574372,0.0015684045,0.00021662773,0.000022499324,0.0000072343823,0.00042294784,0.0006089494,0.000027026314],"category_scores_gemma":[0.000108538574,0.00031695468,0.00042687674,0.00028028368,0.00024661407,0.000001501383,0.00020395975,0.0003327276,0.00001576381],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020021582,0.00006177468,0.000011447208,0.0021131104,0.0005748198,0.000012901968,0.000024115472,0.0000908693,0.40633813,0.00042599198,0.00023076817,0.59009606],"study_design_scores_gemma":[0.00025677853,0.0002562397,0.0000015970762,0.0008741172,0.00021211205,0.00006004123,0.000011186216,0.000018367742,0.061147347,0.00033300955,0.9364004,0.0004287878],"about_ca_topic_score_codex":0.000035317407,"about_ca_topic_score_gemma":0.0000026361763,"teacher_disagreement_score":0.9361696,"about_ca_system_score_codex":0.00004929239,"about_ca_system_score_gemma":0.00031123165,"threshold_uncertainty_score":0.99992824},"labels":[],"label_agreement":null},{"id":"W81846730","doi":"10.1007/978-1-4939-2020-4_6","title":"Synthesis and Alkylation of Aza-Gly-Pro Building Blocks of Peptidomimetic Libraries for Developing Prostaglandin F2α Receptor Modulators as Therapeutics to Inhibit Preterm Labor","year":2014,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Neonatal Respiratory Health Research","field":"Medicine","cited_by":3,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Canadian Institutes of Health Research","keywords":"Peptidomimetic; Alkylation; Pharmacology; Receptor; Medicine; Uterine contraction; Prostaglandin; Chemistry; Combinatorial chemistry; Peptide; Biochemistry; Internal medicine; Uterus","score_opus":0.10611344826092146,"score_gpt":0.49938607975071236,"score_spread":0.3932726314897909,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W81846730","genre_codex":"review","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038361626,0.76537055,0.22658265,0.00012764036,0.00010712448,0.0038747212,0.00006935586,0.000017151428,0.000014654296],"genre_scores_gemma":[0.00006583107,0.36151296,0.63751787,0.00016583284,0.00004119032,0.00057803525,0.000028917826,0.00007199477,0.00001736346],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9952969,0.0020760836,0.0012868291,0.000658793,0.00020646668,0.0004749395],"domain_scores_gemma":[0.99505866,0.0034701705,0.00057998404,0.00051010336,0.00023616108,0.0001449233],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.003649127,0.00039407852,0.0025019874,0.00094411086,0.00004453479,0.000011974532,0.00024678328,0.0007207285,0.000010984924],"category_scores_gemma":[0.0074077477,0.00031866215,0.00022027444,0.00068739033,0.0002522444,0.000027871234,0.00025255705,0.000406753,9.821171e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0002706221,0.000023789707,0.00015531064,0.03516072,0.00017875526,0.0000028454244,0.00009338206,6.9814956e-7,0.040681414,0.0020265991,0.0000019597906,0.9214039],"study_design_scores_gemma":[0.00082451344,0.0013521997,0.000024767933,0.016936451,0.00047631457,0.000021415535,0.000019876516,0.00007274186,0.35577542,0.0021996861,0.6218468,0.00044981577],"about_ca_topic_score_codex":0.000016296763,"about_ca_topic_score_gemma":0.0000013597643,"teacher_disagreement_score":0.9209541,"about_ca_system_score_codex":0.00014914306,"about_ca_system_score_gemma":0.0008696459,"threshold_uncertainty_score":0.99992657},"labels":[],"label_agreement":null},{"id":"W82000409","doi":"10.1007/978-1-62703-056-4_3","title":"Live-Cell Migration and Adhesion Turnover Assays","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Fluorescence Microscopy Techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University","funders":"McGill University","keywords":"Adhesion; Cell adhesion; Cell biology; Biology; Chemistry","score_opus":0.01363039287094909,"score_gpt":0.3750017306877721,"score_spread":0.361371337816823,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W82000409","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.24802439,0.0039229495,0.7473904,0.000043419037,0.000103748665,0.00016404387,0.000003828321,0.00001761496,0.00032962867],"genre_scores_gemma":[0.13582909,0.0003391358,0.86327755,0.0002975047,0.00006668253,0.000037700145,0.00005059772,0.000024261935,0.000077459044],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.998462,0.0005794277,0.00020965879,0.00035019484,0.00004140387,0.00035727173],"domain_scores_gemma":[0.999479,0.000035607554,0.00007806956,0.00030002245,0.000033585777,0.00007374733],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007878079,0.00017787906,0.0001769568,0.000079675585,0.000034084107,0.000007849049,0.00013533664,0.0003404254,0.000012385435],"category_scores_gemma":[0.0002403941,0.00016852254,0.000050028084,0.00009119017,0.00013615159,0.000006664262,0.00017693502,0.00015563544,0.0000043707387],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000024981726,0.00004997158,0.04904727,0.000008974696,0.0000053394956,0.0000012708875,0.00004723612,0.0000014289192,0.94460714,0.0003014434,0.000065135355,0.005839801],"study_design_scores_gemma":[0.00021674784,0.00019292842,0.0024025876,0.00000808152,0.00000772929,0.000013478422,0.00002562917,0.00001789465,0.98403215,0.00076697,0.01212083,0.00019496193],"about_ca_topic_score_codex":0.000026263426,"about_ca_topic_score_gemma":0.000012804275,"teacher_disagreement_score":0.115887195,"about_ca_system_score_codex":0.000019683886,"about_ca_system_score_gemma":0.000017696175,"threshold_uncertainty_score":0.687215},"labels":[],"label_agreement":null},{"id":"W82007442","doi":"10.1007/978-1-61779-474-2_23","title":"Using Native Gel Electrophoresis and Phosphofluoroimaging to Analyze GFP-Tagged Proteasomes","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Ubiquitin and proteasome pathways","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Deutsche Forschungsgemeinschaft","keywords":"Proteasome; Polyacrylamide gel electrophoresis; Yeast; Gel electrophoresis; Proteases; Proteolysis; Molecular mass; Biology; Biochemistry; Molecular biology; Immunoprecipitation; Blot; Green fluorescent protein; Chemistry; Cell biology; Gene; Enzyme","score_opus":0.03051965024032899,"score_gpt":0.3893317861408492,"score_spread":0.3588121359005202,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W82007442","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.5616976,0.0061322423,0.4309975,0.00010328435,0.0001063519,0.00047203928,0.000010170904,0.00001401997,0.00046681464],"genre_scores_gemma":[0.28919616,0.000105921965,0.7096178,0.0007363867,0.000117500094,0.00011311891,0.000021798423,0.000039261045,0.000052032512],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99715096,0.0011878229,0.00030069795,0.0005561655,0.0000827878,0.0007215553],"domain_scores_gemma":[0.99920684,0.00005451194,0.00010050987,0.0003631041,0.000072266295,0.0002027872],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0015687814,0.00028497874,0.00034718262,0.00020920941,0.00008743263,0.000021104039,0.0002217149,0.00025686907,0.000022795668],"category_scores_gemma":[0.0007363229,0.00027612885,0.000093837334,0.0003422521,0.0001393277,0.00000672544,0.00030546437,0.00021965211,0.000003357384],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00007906344,0.000046299047,0.011741737,0.000014901126,0.00005791822,0.0000042721836,0.00016866565,0.000009446016,0.97497356,0.0007895897,0.000017810116,0.012096711],"study_design_scores_gemma":[0.00037404522,0.00020779173,0.0014125496,0.000016181782,0.000024302532,0.0000406207,0.00007442919,0.00011893293,0.9897303,0.001111985,0.006536109,0.00035277364],"about_ca_topic_score_codex":0.000087337125,"about_ca_topic_score_gemma":0.0000071076565,"teacher_disagreement_score":0.27862033,"about_ca_system_score_codex":0.000047507052,"about_ca_system_score_gemma":0.000065057124,"threshold_uncertainty_score":0.99996907},"labels":[],"label_agreement":null},{"id":"W82922132","doi":"10.1007/7651_2018_153","title":"Qualitatively Monitoring Binding and Expression of the Transcription Factors Sp1 and NFI as a Useful Tool to Evaluate the Quality of Primary Cultured Epithelial Stem Cells in Tissue Reconstruction","year":2018,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Corneal Surgery and Treatments","field":"Medicine","cited_by":5,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Centre hospitalier universitaire de Québec","funders":"","keywords":"Cell biology; Transcription factor; Stem cell; Biology; Computational biology; Genetics; Gene","score_opus":0.10305429771324018,"score_gpt":0.448361529619948,"score_spread":0.34530723190670787,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W82922132","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9882143,0.00016539711,0.010803391,0.000064781794,0.0002572109,0.00045258002,0.000014332094,0.0000038078852,0.000024163497],"genre_scores_gemma":[0.9555317,0.00002963151,0.04435895,0.000022229082,0.000015499383,0.000016474125,0.0000019243992,0.0000057413,0.000017832012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9968006,0.0024376106,0.00035768526,0.00021154774,0.00008099792,0.00011153675],"domain_scores_gemma":[0.9993148,0.00033648135,0.000114608585,0.00014939999,0.000059032995,0.00002572092],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019394885,0.00010147182,0.000320693,0.0000806407,0.000037296744,0.0000031213933,0.000046015935,0.00010547916,0.000004024623],"category_scores_gemma":[0.00028137566,0.000056234727,0.00004125761,0.0001855012,0.00017568351,0.000026037636,0.000039485396,0.00010333592,2.632769e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0003017585,0.000029126246,0.08519966,0.00003805903,0.000017139015,8.2700086e-7,0.0032171127,9.983867e-7,0.8650027,0.000044196022,1.6511139e-7,0.04614825],"study_design_scores_gemma":[0.00058484206,0.00022726564,0.14536463,0.00014103044,0.000024863355,0.0000050310855,0.000816834,0.0000034737682,0.85201335,0.0007451091,0.000026054595,0.00004753197],"about_ca_topic_score_codex":0.00020769569,"about_ca_topic_score_gemma":0.0000105875515,"teacher_disagreement_score":0.06016496,"about_ca_system_score_codex":0.00004452602,"about_ca_system_score_gemma":0.000025311692,"threshold_uncertainty_score":0.22931856},"labels":[],"label_agreement":null},{"id":"W83646335","doi":"10.1007/978-1-62703-284-1_7","title":"Promoter Deletion Analysis Using a Dual-Luciferase Reporter System","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Retinal Development and Disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":52,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University Health Centre; Montreal General Hospital","funders":"","keywords":"Luciferase; Dual (grammatical number); Luciferases; Molecular biology; Computational biology; Chemistry; Biology; Genetics; Gene; Art; Transfection","score_opus":0.016853329585189075,"score_gpt":0.35608522012598004,"score_spread":0.33923189054079095,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W83646335","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46522826,0.00020441649,0.53361386,0.000042131043,0.00007810788,0.00022398641,0.0000011703887,0.000011085573,0.0005969448],"genre_scores_gemma":[0.44590864,0.000013774123,0.55345607,0.00022474716,0.000035498764,0.000089328634,0.0001319514,0.0000204996,0.00011948994],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997731,0.0008127629,0.0004633315,0.0005686136,0.00007661142,0.0003477179],"domain_scores_gemma":[0.99922657,0.000016596561,0.00015425237,0.0004255117,0.000105554514,0.00007150427],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008669916,0.0002083583,0.00032576305,0.00027372007,0.000045242745,0.000027045593,0.00013391163,0.00029295965,0.00005448945],"category_scores_gemma":[0.00017445107,0.00018740639,0.00019292609,0.00045996564,0.00007857314,0.0000043134546,0.00012540308,0.00009190807,0.000008573585],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000020907328,0.000030220304,0.020110706,0.000019014067,0.00022973554,0.000023911729,0.000028142234,0.00013807413,0.97655,0.00015592136,0.000033165852,0.0026602312],"study_design_scores_gemma":[0.0013466635,0.00041711875,0.019315995,0.00004312297,0.0004979195,0.00021668461,0.00040653071,0.012242524,0.95825386,0.0019036615,0.00414138,0.0012145685],"about_ca_topic_score_codex":0.00013501529,"about_ca_topic_score_gemma":0.000016197277,"teacher_disagreement_score":0.019842189,"about_ca_system_score_codex":0.000036332658,"about_ca_system_score_gemma":0.00005079449,"threshold_uncertainty_score":0.7642211},"labels":[],"label_agreement":null},{"id":"W84449828","doi":"10.1007/978-1-59745-483-4_9","title":"Forming an α-Hemolysin Nanopore for Single-Molecule Analysis","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Nanopore and Nanochannel Transport Studies","field":"Engineering","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Nanopore; Biomolecule; Molecule; Nanotechnology; Nucleic acid; Biophysics; DNA; Hemolysin; Ionic bonding; Materials science; Chemistry; Chemical physics; Biochemistry; Ion; Biology","score_opus":0.024941764056602818,"score_gpt":0.35781324112503016,"score_spread":0.33287147706842735,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W84449828","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.04234603,0.0014975617,0.95455813,0.000065822416,0.00014537948,0.00023702635,0.000012789344,0.00014607332,0.0009911954],"genre_scores_gemma":[0.3070362,0.000048679296,0.6924953,0.00019808517,0.00003585015,0.000044751087,0.00009625418,0.000026019276,0.000018910088],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99859136,0.00013047637,0.0003880734,0.00036123587,0.00005587517,0.00047299234],"domain_scores_gemma":[0.9994459,0.00008366447,0.000043723823,0.0003163747,0.000045240973,0.00006509976],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000604547,0.00024185218,0.0005558132,0.00049171486,0.000057104757,0.000010613794,0.0002036217,0.00020409147,0.000009961111],"category_scores_gemma":[0.000059455757,0.00023584184,0.0002505222,0.0009107627,0.000045984358,0.000050500883,0.000013748954,0.000118458556,7.8057724e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000017389326,0.000058763948,0.00028245826,0.000015918062,0.0002333579,0.000023868633,0.00018686576,0.0028282504,0.9635536,0.0012609969,0.000007737271,0.031530805],"study_design_scores_gemma":[0.00051898934,0.00040152718,0.00021914493,0.000009536525,0.00032722641,0.000005694246,0.00006731241,0.008130839,0.9747449,0.013448,0.0017175523,0.00040924223],"about_ca_topic_score_codex":0.000009325768,"about_ca_topic_score_gemma":0.000033611937,"teacher_disagreement_score":0.26469016,"about_ca_system_score_codex":0.000043773623,"about_ca_system_score_gemma":0.000008749221,"threshold_uncertainty_score":0.9617351},"labels":[],"label_agreement":null},{"id":"W84742063","doi":"10.1007/978-1-4939-2257-4_29","title":"Assessment of Posttranslational Modification of Mitochondrial Proteins","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mitochondrial Function and Pathology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Posttranslational modification; Computational biology; Chemistry; Cell biology; Biology; Biochemistry; Enzyme","score_opus":0.05491683891598186,"score_gpt":0.42092627275429806,"score_spread":0.3660094338383162,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W84742063","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.058136284,0.00024318456,0.9386255,0.0000813994,0.00048984046,0.00032929287,0.000021906331,0.000004481635,0.0020681072],"genre_scores_gemma":[0.076767266,0.000012961036,0.9227535,0.00006844327,0.000090667796,0.000051558272,0.00018191393,0.000012262778,0.000061400904],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9979553,0.001052303,0.0004415746,0.00030872674,0.00009236133,0.00014972543],"domain_scores_gemma":[0.999191,0.00003707736,0.00018712797,0.00033664325,0.00019330981,0.00005488173],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00077483436,0.00011773866,0.00025967276,0.00013308569,0.000010548346,0.0000019596898,0.00017089288,0.00028161687,0.000021840937],"category_scores_gemma":[0.0004638921,0.00011443228,0.00009496846,0.0001603983,0.00014970127,0.0000020483596,0.00005408673,0.000101243444,8.4706016e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012748329,0.00009182508,0.004317538,0.000011532108,0.000024256593,9.671694e-7,0.000032105407,0.00047075673,0.9829383,0.0105254585,0.000029566852,0.0014302261],"study_design_scores_gemma":[0.0012150195,0.00073429977,0.0012353011,0.00000692703,0.000013873392,0.000010447601,0.000028970793,0.00036510776,0.9880721,0.0044305045,0.003759807,0.00012764118],"about_ca_topic_score_codex":0.000029136636,"about_ca_topic_score_gemma":0.000009624026,"teacher_disagreement_score":0.01863098,"about_ca_system_score_codex":0.000013022647,"about_ca_system_score_gemma":0.0002065361,"threshold_uncertainty_score":0.4666413},"labels":[],"label_agreement":null},{"id":"W84968995","doi":"10.1007/978-1-61779-340-0_10","title":"Propagation, Purification, and In Vivo Testing of Oncolytic Vesicular Stomatitis Virus Strains","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Ottawa Hospital; University of Ottawa","funders":"Canadian Institutes of Health Research","keywords":"Oncolytic virus; Vesicular stomatitis virus; Vesicular Stomatitis; In vivo; Virology; Biology; Virus; Microbiology; Genetics","score_opus":0.05302494793540492,"score_gpt":0.38653513315430227,"score_spread":0.33351018521889736,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W84968995","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8436125,0.00088621705,0.15433188,0.000037450947,0.00003523986,0.00040036204,0.000012327369,0.000008603427,0.00067544513],"genre_scores_gemma":[0.5825017,0.00011430973,0.4170695,0.000129325,0.00002052632,0.00009477675,0.000016869382,0.000027506505,0.000025478199],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99758,0.0011649173,0.00043056364,0.00044526428,0.00008127892,0.00029801],"domain_scores_gemma":[0.9992206,0.000052010575,0.00013442099,0.00041359937,0.00012041192,0.000058963404],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016031392,0.00016252525,0.00025896594,0.00022192916,0.000027720698,0.000005924548,0.0002458584,0.00022633182,0.000031055573],"category_scores_gemma":[0.0008270418,0.0001651694,0.000041894735,0.00037774292,0.0002684833,0.0000041271837,0.00010451411,0.00014557525,0.000001041901],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014230561,0.000096774515,0.0074810786,0.00002767475,0.000024761932,0.000010907837,0.0001376105,0.00003211241,0.97840333,0.00027433754,0.0000041893086,0.013364923],"study_design_scores_gemma":[0.0005514505,0.0011665048,0.0060136435,0.000020484162,0.0000070244364,0.000013082687,0.00004179394,0.0003445078,0.9896533,0.0018489193,0.0001736043,0.00016567527],"about_ca_topic_score_codex":0.0001280993,"about_ca_topic_score_gemma":0.00029588668,"teacher_disagreement_score":0.2627376,"about_ca_system_score_codex":0.000025932593,"about_ca_system_score_gemma":0.00013820578,"threshold_uncertainty_score":0.6735413},"labels":[],"label_agreement":null},{"id":"W85112055","doi":"10.1007/978-1-62703-580-4_17","title":"Next-Generation Mapping of Genetic Mutations Using Bulk Population Sequencing","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":13,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto; Agriculture and Agri-Food Canada","funders":"","keywords":"Genetics; Biology; Population; Locus (genetics); Mutant; Mutation; Phenotype; Reference genome; Genome; Linkage disequilibrium; Gene; Computational biology; Allele; Haplotype","score_opus":0.10302752518936398,"score_gpt":0.3474341763694268,"score_spread":0.24440665118006283,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W85112055","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.83622897,0.00013910046,0.1631499,0.00013363283,0.000088687964,0.00018796028,0.0000041461135,0.000010999167,0.000056598412],"genre_scores_gemma":[0.5533835,0.0000038567377,0.44644693,0.000049884835,0.000044934946,0.000015602594,0.000049814706,6.512502e-7,0.000004797891],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.99880457,0.000463061,0.00032079068,0.0002037625,0.00004997907,0.0001578611],"domain_scores_gemma":[0.99962115,0.00011237102,0.00011224143,0.000053809985,0.00007019142,0.000030211151],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002472964,0.000084368374,0.00014636289,0.000038171213,0.00007099092,0.000020031246,0.00009597221,0.00010839316,0.00019731902],"category_scores_gemma":[0.0001531253,0.000042686657,0.00005203829,0.00037118365,0.000033876146,0.000049171165,0.000038665064,0.00005945579,0.0000034247298],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[3.69552e-7,0.000010750436,0.011129626,0.0000021991707,0.0000048823363,4.7584956e-7,0.00005659373,0.0016117725,0.9434877,0.00045975784,3.3810437e-7,0.04323551],"study_design_scores_gemma":[0.0002628067,0.00020150366,0.4057852,0.000035715646,0.000032049033,0.00003001127,0.00036562685,0.1888823,0.3408516,0.06291567,0.00020902514,0.00042846426],"about_ca_topic_score_codex":0.002318435,"about_ca_topic_score_gemma":0.00017117382,"teacher_disagreement_score":0.6026361,"about_ca_system_score_codex":0.000040216175,"about_ca_system_score_gemma":0.000010099603,"threshold_uncertainty_score":0.35047957},"labels":[],"label_agreement":null},{"id":"W85508642","doi":"10.1007/978-1-59745-554-1_17","title":"Production of Chimeric Heavy-Chain Antibodies","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Monoclonal and Polyclonal Antibodies Research","field":"Medicine","cited_by":30,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Heavy chain; Chain (unit); Antibody; Medicine; Immunology; Physics","score_opus":0.055285904998337874,"score_gpt":0.4412466274636522,"score_spread":0.3859607224653143,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W85508642","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9142444,0.002960228,0.07797401,0.0016344291,0.0002697831,0.00030021122,0.0000028468833,0.000020686886,0.0025933867],"genre_scores_gemma":[0.19196679,0.0010933824,0.8048852,0.00027797907,0.000097849734,0.000019520807,0.00002265884,0.00001691969,0.0016196968],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9984782,0.0005856375,0.0002907136,0.00027526324,0.00011052788,0.000259665],"domain_scores_gemma":[0.99946934,0.00010241405,0.000059984006,0.00023179705,0.00008007155,0.00005637551],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006982088,0.000116540214,0.00040445267,0.0002437565,0.00004073078,8.9113644e-7,0.00008556514,0.00010548132,0.000052069347],"category_scores_gemma":[0.0005735767,0.000090569345,0.00010376818,0.00034643247,0.00045202154,0.000012660587,0.00007216041,0.0002227297,0.000007025368],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027184642,0.00012427905,0.061463397,0.00007049976,0.000047376034,0.00009255757,0.00015219963,0.000007195798,0.92031753,0.0013796712,0.00007519155,0.015998231],"study_design_scores_gemma":[0.00043079475,0.00056870043,0.050527193,0.00004338267,0.000015839185,0.00051032176,0.00003867558,0.0001241359,0.93866867,0.0023685459,0.0065744,0.00012934092],"about_ca_topic_score_codex":0.00016511601,"about_ca_topic_score_gemma":0.0000031723582,"teacher_disagreement_score":0.7269112,"about_ca_system_score_codex":0.000018274048,"about_ca_system_score_gemma":0.000068021465,"threshold_uncertainty_score":0.3693311},"labels":[],"label_agreement":null},{"id":"W8577841","doi":"10.1007/978-1-60327-414-2_10","title":"Use of SNP-Arrays for ChIP Assays: Computational Aspects","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Ottawa","funders":"","keywords":"Chromatin immunoprecipitation; Biology; Histone; DNA microarray; Computational biology; SNP genotyping; Genotyping; Chromatin; Genetics; Single-nucleotide polymorphism; SNP; Gene; Gene expression; Genotype; Promoter","score_opus":0.0732615603295756,"score_gpt":0.42305595550147174,"score_spread":0.34979439517189614,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W8577841","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000028301585,0.48283377,0.51615125,0.000009056485,0.0001851671,0.0005353838,0.00013745858,0.0000050984504,0.00011453779],"genre_scores_gemma":[0.0000036430472,0.43136957,0.56688374,0.000084749736,0.00008621312,0.000074265874,0.0014192186,0.000045724577,0.000032894364],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9968622,0.0010465056,0.0008992439,0.00072608097,0.00007337862,0.00039261745],"domain_scores_gemma":[0.99838865,0.00027989564,0.0005579039,0.00058597606,0.00011948533,0.00006808462],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0009340475,0.00046058896,0.0014319603,0.00022905189,0.000035071687,0.000018544803,0.00046206266,0.0009560626,0.0000057304487],"category_scores_gemma":[0.00065132376,0.0004341483,0.0006736378,0.00019866385,0.00013720685,0.0000017227749,0.00017322834,0.00024311904,0.0000013190856],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000026153451,0.00015335591,0.000008720733,0.002223264,0.00037681556,0.000007993572,0.000010702133,0.001174047,0.031521447,0.011066638,0.00017185156,0.953259],"study_design_scores_gemma":[0.00040273138,0.00054933364,0.000005695613,0.00057388085,0.00025232875,0.000053640855,0.0000033402132,0.0006855775,0.0022974752,0.012863432,0.98170936,0.00060323114],"about_ca_topic_score_codex":0.0000075951634,"about_ca_topic_score_gemma":0.0000073591314,"teacher_disagreement_score":0.98153746,"about_ca_system_score_codex":0.00004672001,"about_ca_system_score_gemma":0.00032122122,"threshold_uncertainty_score":0.99981105},"labels":[],"label_agreement":null},{"id":"W8603682","doi":"10.1007/978-1-60761-416-6_14","title":"Reversing Agents for ATP-Binding Cassette Drug Transporters","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Drug Transport and Resistance Mechanisms","field":"Medicine","cited_by":79,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Northern British Columbia","funders":"","keywords":"ATP-binding cassette transporter; Multiple drug resistance; Transporter; Pharmacology; Abcg2; P-glycoprotein; Drug; Drug resistance; Reversing; Efflux; Biology; Gene; Biochemistry; Genetics","score_opus":0.07743735321685621,"score_gpt":0.46929614831289906,"score_spread":0.3918587950960428,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W8603682","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000072939483,0.58225167,0.41547427,0.000110092646,0.0004771603,0.0013139496,0.000042622578,0.000036738093,0.000286202],"genre_scores_gemma":[4.2833156e-7,0.53515625,0.46332756,0.00025213097,0.00006319227,0.00008728339,0.00051646744,0.000063191575,0.0005335069],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99675953,0.0006141163,0.00096937874,0.00085002737,0.00012544097,0.00068147806],"domain_scores_gemma":[0.9987794,0.00020387731,0.00031180133,0.00051353185,0.00004143203,0.00014995193],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.001832628,0.0005775171,0.0028621051,0.00058145315,0.00007892318,0.000009299056,0.00028747867,0.00077093276,0.00003056643],"category_scores_gemma":[0.00007934446,0.00047545735,0.001196301,0.00045674888,0.00009141458,0.00001953946,0.000014746819,0.0006435963,0.0000049586197],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049234397,0.00007079894,0.00000848648,0.008948113,0.0002585467,0.0005816137,0.00011426673,6.282854e-7,0.0021854446,0.00056118035,0.00006873034,0.98715293],"study_design_scores_gemma":[0.00083710597,0.00012052825,0.0000028335576,0.008451028,0.0018534117,0.000082642444,0.00002474185,0.0000048350707,0.0008011365,0.0004825893,0.9868894,0.00044972313],"about_ca_topic_score_codex":0.000008845061,"about_ca_topic_score_gemma":0.000007847737,"teacher_disagreement_score":0.9868207,"about_ca_system_score_codex":0.00022443128,"about_ca_system_score_gemma":0.00017869342,"threshold_uncertainty_score":0.9997697},"labels":[],"label_agreement":null},{"id":"W86435912","doi":"10.1007/978-1-59745-394-3_29","title":"In Vivo Study of HCV in Mice with Chimeric Human Livers","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Ribavirin; Hepatocellular carcinoma; Cirrhosis; In vivo; Hepatitis C virus; Medicine; Pegylated interferon; Virology; Hepatitis C; Immunology; Virus; Biology; Cancer research; Internal medicine; Biotechnology","score_opus":0.04516189960608394,"score_gpt":0.48152681724862767,"score_spread":0.4363649176425437,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W86435912","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98500955,0.00015009008,0.008616193,0.00016235188,0.000020771113,0.00069568405,0.0000010596804,0.00000770241,0.0053365757],"genre_scores_gemma":[0.82771975,0.000017894336,0.17187828,0.00028659252,0.000008318829,0.000027059548,0.0000019035252,0.0000117316995,0.000048496302],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9970766,0.0018203398,0.00034283078,0.00032575542,0.00012244273,0.00031205404],"domain_scores_gemma":[0.9994599,0.00011396833,0.00005595036,0.00028207543,0.00003677704,0.000051331725],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0012905248,0.00012211356,0.00048445267,0.00066601165,0.000010576452,0.0000020418652,0.00015559621,0.00012218698,0.000075261196],"category_scores_gemma":[0.0003266874,0.000104533625,0.00002774291,0.0008557512,0.00010287205,0.000018529165,0.00004806584,0.00037957734,0.0000019613562],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018971921,0.0008657842,0.21498598,0.000016236718,0.00002346297,0.0007328251,0.0012310317,0.000032989956,0.7587638,0.00013360164,0.000006084543,0.023018489],"study_design_scores_gemma":[0.025390116,0.03271903,0.40522313,0.0003698791,0.00009079259,0.00004008845,0.0027804724,0.00089630025,0.5248506,0.0033336622,0.0034514903,0.0008544215],"about_ca_topic_score_codex":0.0021694512,"about_ca_topic_score_gemma":0.0010279686,"teacher_disagreement_score":0.23391318,"about_ca_system_score_codex":0.000088229404,"about_ca_system_score_gemma":0.000060779577,"threshold_uncertainty_score":0.42627576},"labels":[],"label_agreement":null},{"id":"W86828126","doi":"10.1007/978-1-62703-128-8_15","title":"Human Long-Term Culture Initiating Cell Assay","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Hematopoietic Stem Cell Transplantation","field":"Medicine","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies; BC Cancer Agency; Terry Fox Research Institute","funders":"","keywords":"Haematopoiesis; Cord blood; Bone marrow; Progenitor cell; Cell culture; Stem cell; Stromal cell; Blood cell; Biology; Limiting; Hematopoietic stem cell; Peripheral blood; Cell; Andrology; Immunology; Cell biology; Medicine; Cancer research; Biochemistry; Genetics","score_opus":0.044708580257381114,"score_gpt":0.43482334460867306,"score_spread":0.39011476435129194,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W86828126","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.18884325,0.00094696926,0.78916067,0.000054369757,0.00021458852,0.00028672733,0.000002475805,0.0000420223,0.02044894],"genre_scores_gemma":[0.4353367,0.000014745996,0.5639341,0.00039327046,0.00007909151,0.000025639787,0.00006223677,0.000021019938,0.00013319898],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.997798,0.0011771597,0.00032772397,0.00022798282,0.00008046243,0.0003886589],"domain_scores_gemma":[0.9993837,0.00013801106,0.00008386834,0.00024962198,0.00003530541,0.00010951466],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016384079,0.00015567084,0.0003232659,0.00012646912,0.00004343225,0.000005100022,0.00008628666,0.00029131104,0.00013742078],"category_scores_gemma":[0.00016109813,0.0001336044,0.000081787584,0.0001756186,0.00006322175,0.000028509672,0.000029356917,0.00030469426,0.000025215282],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000007036068,0.00008974605,0.21205302,0.00014647614,0.00001744638,0.000052223982,0.0006673918,6.1483075e-7,0.7836776,0.0009793709,0.000006503063,0.0023025793],"study_design_scores_gemma":[0.0012191294,0.00016077506,0.057735983,0.00010701054,0.00010231419,0.00018867065,0.000099254714,0.000016112826,0.9393598,0.00042041697,0.0003794207,0.00021114043],"about_ca_topic_score_codex":0.000008453092,"about_ca_topic_score_gemma":0.0000020423809,"teacher_disagreement_score":0.24649344,"about_ca_system_score_codex":0.00004470374,"about_ca_system_score_gemma":0.000017531025,"threshold_uncertainty_score":0.5448229},"labels":[],"label_agreement":null},{"id":"W87556421","doi":"10.1007/978-1-60761-842-3_11","title":"Mass Spectrometric Protein Identification Using the Global Proteome Machine","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Center for Research Resources","keywords":"Proteome; Identification (biology); Mass spectrometry; Computational biology; Computer science; Cover (algebra); Chemistry; Biology; Bioinformatics; Chromatography; Engineering; Ecology","score_opus":0.019408461366810847,"score_gpt":0.41094722541603645,"score_spread":0.3915387640492256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W87556421","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.10704594,0.000108196116,0.890767,0.0002801693,0.000037516456,0.00050193357,0.000020971383,0.00006795235,0.001170352],"genre_scores_gemma":[0.09158552,0.000005184566,0.9077491,0.000041833264,0.000041923267,0.0004880525,0.000017440596,0.000016216904,0.00005470787],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9988545,0.00015805352,0.00030894866,0.00036126922,0.00006421568,0.00025298673],"domain_scores_gemma":[0.9990465,0.000046813548,0.00017304928,0.0006553989,0.000042814278,0.00003540233],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00083458575,0.00014238,0.00016150084,0.000079220066,0.00008889914,0.00002338676,0.00045824243,0.00021778204,0.00009965924],"category_scores_gemma":[0.00036722753,0.00011246758,0.00006604276,0.00067292654,0.0001442629,0.00002410916,0.00010414724,0.00050840713,0.000003126554],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005656594,0.000023101416,0.00076171634,0.000009678093,0.000006613389,0.0000017815013,0.000004038405,0.000012865275,0.9475954,0.045366965,2.9080715e-7,0.006211849],"study_design_scores_gemma":[0.00008612579,0.000007249162,0.000030301724,0.0000035325684,0.0000060392867,0.000014265002,0.0000044762837,0.0015027415,0.7415329,0.25574315,0.00097046857,0.00009874174],"about_ca_topic_score_codex":0.000067342306,"about_ca_topic_score_gemma":0.000008247212,"teacher_disagreement_score":0.21037617,"about_ca_system_score_codex":0.000087968845,"about_ca_system_score_gemma":0.00003103694,"threshold_uncertainty_score":0.45862946},"labels":[],"label_agreement":null},{"id":"W88155746","doi":"10.1007/978-1-62703-580-4_16","title":"Global DNA Methylation Analysis Using Methyl-Sensitive Amplification Polymorphism (MSAP)","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Molecular Biology Research","field":"Agricultural and Biological Sciences","cited_by":53,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"HpaII; DNA methylation; Illumina Methylation Assay; Biology; Methylated DNA immunoprecipitation; Methylation; Isoschizomer; Molecular biology; Restriction enzyme; RNA-Directed DNA Methylation; genomic DNA; Genetics; Differentially methylated regions; Epigenetics of physical exercise; Bisulfite sequencing; Gene; Gene expression","score_opus":0.046350183669227524,"score_gpt":0.38640643145203185,"score_spread":0.3400562477828043,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W88155746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.63461727,0.00023231127,0.36392128,0.00045868184,0.00006609802,0.00033116044,0.00004297032,0.000035952555,0.00029423693],"genre_scores_gemma":[0.6897466,0.000020115325,0.3093121,0.00040505335,0.00004785354,0.000055266635,0.00038806288,0.000002065191,0.000022853475],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9940084,0.0040687663,0.00044255183,0.0007364235,0.00015155414,0.00059226574],"domain_scores_gemma":[0.998796,0.0005404097,0.0001792984,0.00018592396,0.00016966456,0.00012874084],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001761517,0.00024804403,0.00050101493,0.00015089782,0.00011911298,0.00004723393,0.0003890031,0.00044682604,0.00023038266],"category_scores_gemma":[0.0005922422,0.000121450605,0.00024867567,0.0026037828,0.00021324621,0.00007179869,0.00019125231,0.00021431512,0.000035652174],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014511748,0.000037304813,0.01535995,0.0000012381097,0.00017509918,0.000010482492,0.000015334781,0.00007925248,0.92950135,0.0011656388,0.0000046413784,0.053635184],"study_design_scores_gemma":[0.00030623737,0.00024837532,0.35414085,0.000008596863,0.00027490215,0.000046760983,0.00017586569,0.008936638,0.6100045,0.02467598,0.0005219255,0.00065939775],"about_ca_topic_score_codex":0.0023193886,"about_ca_topic_score_gemma":0.00034108345,"teacher_disagreement_score":0.3387809,"about_ca_system_score_codex":0.00013312243,"about_ca_system_score_gemma":0.000021002363,"threshold_uncertainty_score":0.4952612},"labels":[],"label_agreement":null},{"id":"W88523622","doi":"10.1007/978-1-60761-999-4_14","title":"Dynamic Expansion Culture for Mesenchymal Stem Cells","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Mesenchymal stem cell research","field":"Medicine","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"Canadian Institutes of Health Research","keywords":"Mesenchymal stem cell; Cell biology; Regenerative medicine; Cell culture; Contact inhibition; Cell growth; Cell; Stem cell; Biology; Biomedical engineering; Chemistry; Engineering; Genetics","score_opus":0.07809959076766858,"score_gpt":0.45263922207429436,"score_spread":0.37453963130662576,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W88523622","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.05206979,0.0013010697,0.9392101,0.0001122537,0.00032922777,0.001233867,0.000008317992,0.000045433102,0.005689932],"genre_scores_gemma":[0.02496676,0.00009220959,0.971839,0.00028070013,0.000025573496,0.00017410328,0.000020092797,0.000040699462,0.002560843],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99734217,0.0009907052,0.00038485767,0.00056141656,0.00013982615,0.00058104296],"domain_scores_gemma":[0.99890286,0.00021064494,0.00007691828,0.00050481834,0.00013430757,0.0001704604],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0018895452,0.00021489925,0.00050519244,0.00023728484,0.000043283497,0.000005596168,0.00023924706,0.00042077253,0.0001798283],"category_scores_gemma":[0.0002484069,0.00016604684,0.00017959512,0.0003117978,0.00014903734,0.000020969102,0.00013469315,0.00037213438,0.000025937477],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00024533246,0.00010585471,0.0008620486,0.00010715613,0.000038278187,0.00009938194,0.00040392298,0.0000013186864,0.9568919,0.0014997303,0.000064498665,0.039680604],"study_design_scores_gemma":[0.0014193333,0.001203131,0.00041630425,0.000053264597,0.000042314554,0.000057213972,0.000255882,0.0018025582,0.9823258,0.0044041285,0.0078000566,0.00022000051],"about_ca_topic_score_codex":0.00004415121,"about_ca_topic_score_gemma":0.000008410433,"teacher_disagreement_score":0.039460607,"about_ca_system_score_codex":0.0000973751,"about_ca_system_score_gemma":0.00009603605,"threshold_uncertainty_score":0.6771194},"labels":[],"label_agreement":null},{"id":"W89414468","doi":"10.1007/978-1-61779-191-8_5","title":"Assessment of Permeability Barriers to Macromolecules in the Rodent Endometrium at the Onset of Implantation","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Reproductive System and Pregnancy","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Endometrium; Extracellular; Decidualization; Cell biology; Embryo; Biology; Chemistry; Endocrinology","score_opus":0.032500184628167644,"score_gpt":0.3854459337972907,"score_spread":0.352945749169123,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W89414468","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9152949,0.002665005,0.078950696,0.00013468952,0.00037995924,0.00075037504,0.000046443303,0.000004743813,0.0017732084],"genre_scores_gemma":[0.96716404,0.000022931525,0.032519817,0.00011766677,0.0000033370977,0.00011269518,0.000023143793,0.0000066259427,0.00002972823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99092203,0.007923164,0.0005167248,0.00036134233,0.000035795278,0.00024092263],"domain_scores_gemma":[0.99844885,0.0006329081,0.00018841345,0.0006492185,0.00006606514,0.000014532072],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.004745944,0.00013217959,0.00036852062,0.00019965049,0.000045556637,0.000001637141,0.00042370142,0.00016373511,0.00018979094],"category_scores_gemma":[0.0012293551,0.00007723808,0.00010152934,0.00040685254,0.00035456548,0.000012213071,0.00015209343,0.00019277798,0.0000044312933],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000059504826,0.00005619451,0.22024287,0.0000210678,0.000045986075,0.0000046224145,0.0023642667,0.000007860175,0.773126,0.0022496234,0.00000639141,0.0018155837],"study_design_scores_gemma":[0.00039305893,0.00028659543,0.32112223,0.00001896701,0.000018985824,0.00006621249,0.0013435815,4.8396134e-7,0.6744363,0.002053854,0.00018255234,0.00007719936],"about_ca_topic_score_codex":0.00059374585,"about_ca_topic_score_gemma":0.00010207239,"teacher_disagreement_score":0.10087934,"about_ca_system_score_codex":0.00004583657,"about_ca_system_score_gemma":0.00006755406,"threshold_uncertainty_score":0.31496775},"labels":[],"label_agreement":null},{"id":"W89612929","doi":"10.1007/978-1-62703-311-4_15","title":"Two-Dimensional vs. Three-Dimensional In Vitro Tumor Migration and Invasion Assays","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Angiogenesis and VEGF in Cancer","field":"Biochemistry, Genetics and Molecular Biology","cited_by":44,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute of Cancer Research","funders":"National Centre for the Replacement, Refinement and Reduction of Animals in Research; National Institute for Health and Care Research; Cancer Research UK","keywords":"Angiogenesis; Metastasis; Cancer research; Motility; In vivo; Biology; In vitro; Cell migration; Computational biology; Cell biology; Cancer; Biotechnology; Genetics","score_opus":0.01774254667919348,"score_gpt":0.33047665874035326,"score_spread":0.31273411206115975,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W89612929","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.94983685,0.0028963136,0.046211153,0.00042500932,0.00017295912,0.00031974935,0.000006923448,0.000008396576,0.00012262775],"genre_scores_gemma":[0.5577115,0.000035989,0.4399878,0.0018257917,0.000083382845,0.00014315416,0.00014491228,0.000028423676,0.000039065304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99801403,0.0006105008,0.0003515147,0.0005962851,0.00008727038,0.0003403955],"domain_scores_gemma":[0.9993951,0.00007550831,0.00009334529,0.00028450275,0.000074028154,0.00007756813],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0008164388,0.00022133069,0.00028697326,0.00014607393,0.00004385909,0.000014661664,0.0001413379,0.00023908015,0.000056617035],"category_scores_gemma":[0.00019252213,0.00019747505,0.00008893974,0.00015521499,0.0001493451,0.0000062038584,0.0002229586,0.00014914166,0.000008690407],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00010611029,0.000049473012,0.018600214,0.0000059216927,0.000017759354,0.000009735438,0.000006655615,0.0002587547,0.97272366,0.00017313063,0.000109605666,0.007938961],"study_design_scores_gemma":[0.0010561115,0.00022258138,0.01729226,0.000019463128,0.000010470639,0.000046025023,0.000009555038,0.0035958334,0.97241104,0.0039225025,0.0010956831,0.00031849425],"about_ca_topic_score_codex":0.0007185367,"about_ca_topic_score_gemma":0.00045172818,"teacher_disagreement_score":0.39377666,"about_ca_system_score_codex":0.000029246961,"about_ca_system_score_gemma":0.00007182439,"threshold_uncertainty_score":0.8052799},"labels":[],"label_agreement":null},{"id":"W8963448","doi":"10.1007/978-1-59745-536-7_14","title":"Hematopoietic Colony-Forming Cell Assays","year":2007,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":40,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Stemcell Technologies","funders":"","keywords":"Haematopoiesis; Stem cell; Biology; Progenitor cell; Cell biology; Embryonic stem cell; Bone marrow; Myeloid; In vitro; Adult stem cell; Immunology; Cell; Endothelial stem cell; Genetics","score_opus":0.026162333997808426,"score_gpt":0.39375143371313115,"score_spread":0.3675890997153227,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W8963448","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.08309774,0.00061142043,0.89259785,0.00025620128,0.00052721164,0.00023424366,9.574968e-7,0.000053572945,0.022620816],"genre_scores_gemma":[0.08476713,0.00003925525,0.9109785,0.0033521499,0.00009417612,0.000016832355,0.000023448478,0.000026558768,0.0007019387],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832654,0.00047134608,0.00037007025,0.00034040332,0.00006250988,0.00042910522],"domain_scores_gemma":[0.9990903,0.00035051652,0.00008366369,0.00031343044,0.000052263804,0.000109814995],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019106313,0.00015814479,0.00041632485,0.00025046893,0.000036088688,0.0000027556384,0.00008945613,0.00034652752,0.00018307395],"category_scores_gemma":[0.00036049818,0.0001391527,0.00011721535,0.00032196418,0.00013119422,0.000012448261,0.00006519503,0.00036524332,0.00005144689],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014105685,0.000094422176,0.0040036496,0.000046411482,0.000014013282,0.00021770009,0.000104902516,0.0000034785035,0.9802107,0.0031390116,0.000064512235,0.011960128],"study_design_scores_gemma":[0.0019020276,0.0008877191,0.0033112715,0.00003268369,0.000048601873,0.00034660904,0.00019037633,0.00017345395,0.9539226,0.00978132,0.02914233,0.0002609532],"about_ca_topic_score_codex":0.00001942288,"about_ca_topic_score_gemma":0.000007166763,"teacher_disagreement_score":0.029077817,"about_ca_system_score_codex":0.000063113555,"about_ca_system_score_gemma":0.00005352656,"threshold_uncertainty_score":0.56744826},"labels":[],"label_agreement":null},{"id":"W90217597","doi":"10.1007/978-1-62703-017-5_8","title":"Force Fields for Classical Molecular Dynamics","year":2012,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":167,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Force field (fiction); Pairwise comparison; Molecular dynamics; Field (mathematics); Molecular mechanics; Statistical physics; Classical mechanics; Computer science; Physics; Mathematics; Artificial intelligence; Quantum mechanics","score_opus":0.03227412135959856,"score_gpt":0.42760375336090406,"score_spread":0.3953296320013055,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W90217597","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0000030598374,0.49282047,0.5054982,0.00002433355,0.00037867666,0.00078376755,0.00008624729,0.000012811391,0.00039247517],"genre_scores_gemma":[0.000008269578,0.50125706,0.4952473,0.00028216204,0.00025736535,0.00060703576,0.0018036538,0.00012625137,0.00041090374],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99565005,0.0013807504,0.0008720431,0.0010659195,0.00009827632,0.0009329386],"domain_scores_gemma":[0.99806476,0.00018559599,0.00037392104,0.0011205262,0.00008276887,0.00017243711],"candidate_categories":["metaepi_narrow","research_integrity"],"consensus_categories":[],"category_scores_codex":[0.0011677061,0.00077416905,0.0017277097,0.0002422389,0.000059037786,0.000024456762,0.00084371,0.002718575,0.00001048944],"category_scores_gemma":[0.00055106636,0.00068902853,0.0010527242,0.00021853481,0.00021753258,0.0000030995134,0.00048945606,0.0006646762,0.00000459156],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029354247,0.000057072375,0.000005709667,0.0018988067,0.0002598098,0.000014180457,0.0000072274906,0.000010104642,0.0079249395,0.015184847,0.000029730203,0.9745782],"study_design_scores_gemma":[0.00040176022,0.0003360321,3.7369895e-7,0.00029185982,0.00052774575,0.00009730387,0.000003857755,0.00021238881,0.0028735271,0.010314477,0.9840665,0.0008742168],"about_ca_topic_score_codex":0.0000075504536,"about_ca_topic_score_gemma":0.000035894518,"teacher_disagreement_score":0.98403674,"about_ca_system_score_codex":0.00014367935,"about_ca_system_score_gemma":0.00036440435,"threshold_uncertainty_score":0.99955606},"labels":[],"label_agreement":null},{"id":"W90374671","doi":"10.1007/978-1-60327-394-7_3","title":"Using Peptide Array to Identify Binding Motifs and Interaction Networks for Modular Domains","year":2009,"lang":"en","type":"review","venue":"Methods in molecular biology","topic":"Chemical Synthesis and Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University","funders":"","keywords":"Computational biology; Peptide; SH3 domain; Human proteome project; SH2 domain; Protein–protein interaction; Proteome; Modular design; Homology (biology); Biology; Protein domain; Proto-oncogene tyrosine-protein kinase Src; Bioinformatics; Computer science; Signal transduction; Genetics; Biochemistry; Gene; Proteomics","score_opus":0.06812314983980777,"score_gpt":0.4804819534898024,"score_spread":0.4123588036499946,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W90374671","genre_codex":"methods","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0004967202,0.43716583,0.56181604,0.000010845562,0.00010430301,0.00036168087,0.0000150807555,0.000005675651,0.000023840134],"genre_scores_gemma":[0.000056672,0.5241715,0.4749959,0.00009423277,0.00022802719,0.00009328508,0.00026907897,0.000056284218,0.000035056073],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9967797,0.00094562443,0.00070378644,0.0010221705,0.00006043903,0.00048827744],"domain_scores_gemma":[0.9988551,0.00016977295,0.00030122977,0.00048864447,0.000050194652,0.00013503732],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0012344043,0.00047971393,0.0013954277,0.00030329463,0.000074165764,0.00004858591,0.00031779055,0.0008565124,0.0000059350214],"category_scores_gemma":[0.00066938647,0.00043324038,0.0006590371,0.00033487304,0.00006934814,0.0000032470036,0.00018367814,0.00028934417,0.0000011709294],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000011435122,0.000024958572,0.000009572341,0.00030019836,0.00018365153,0.0000032904118,0.000003852563,0.00017257227,0.54246426,0.00003381141,0.000012541364,0.45677984],"study_design_scores_gemma":[0.00031532277,0.0002127352,0.0000038339467,0.0018016378,0.0010134543,0.00006953979,0.000019948426,0.00077612477,0.059216544,0.0005231868,0.93504524,0.0010024507],"about_ca_topic_score_codex":0.000017635562,"about_ca_topic_score_gemma":0.000007729399,"teacher_disagreement_score":0.93503267,"about_ca_system_score_codex":0.00008878673,"about_ca_system_score_gemma":0.000043360902,"threshold_uncertainty_score":0.99981195},"labels":[],"label_agreement":null},{"id":"W90640939","doi":"10.1007/978-1-61779-034-8_27","title":"High-Resolution Capillary Gas Chromatography in Combination with Mass Spectrometry for Quantification of Three Major Polyamines in Postmortem Brain Cortex","year":2011,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Polyamine Metabolism and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"McGill University; Douglas Mental Health University Institute","funders":"Canadian Institutes of Health Research","keywords":"Spermidine; Spermine; Putrescine; Polyamine; Chemistry; Biochemistry; Chromatography; Enzyme","score_opus":0.01912592134591083,"score_gpt":0.3156988972891708,"score_spread":0.29657297594325993,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W90640939","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.4785907,0.0008243057,0.5199171,0.000098876124,0.000049965864,0.00043971336,0.000022314518,0.0000057385823,0.000051334267],"genre_scores_gemma":[0.5493633,0.00006615623,0.44997782,0.00005973876,0.000017858736,0.00019229774,0.00029538927,0.000020166208,0.00000726695],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9982245,0.00039552644,0.0004987079,0.0005001507,0.00006605631,0.00031506646],"domain_scores_gemma":[0.9991447,0.00006815558,0.00022381719,0.00045015305,0.00007507986,0.000038142625],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009143088,0.00019805116,0.00035500462,0.0005330244,0.000024031062,0.0000044737394,0.00025212095,0.00026357922,0.000005123113],"category_scores_gemma":[0.00018214787,0.0001899148,0.00007895172,0.0007005391,0.00018403654,0.000006609205,0.000048691156,0.00011053587,4.998673e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00017879982,0.00022709847,0.03199871,0.000029250854,0.000027466485,0.0000024165327,0.000030769403,0.000012507399,0.94756174,0.017757032,0.000007047951,0.0021671467],"study_design_scores_gemma":[0.001681432,0.00050881255,0.17965487,0.00001914424,0.000020790016,0.000008248901,0.000048235113,0.0003262134,0.8018468,0.015531073,0.00013522005,0.00021918619],"about_ca_topic_score_codex":0.0005772094,"about_ca_topic_score_gemma":0.000720163,"teacher_disagreement_score":0.14765616,"about_ca_system_score_codex":0.00001893062,"about_ca_system_score_gemma":0.00005254416,"threshold_uncertainty_score":0.7744501},"labels":[],"label_agreement":null},{"id":"W907204266","doi":"10.1007/7651_2015_269","title":"Quantitative Analysis of Intra-chromosomal Contacts: The 3C-qPCR Method","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Chromatin Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":19,"is_retracted":false,"has_abstract":false,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Institute of Cancer Research; Institut National Du Cancer; Centre National de la Recherche Scientifique; Ligue Contre le Cancer","keywords":"Normalization (sociology); Chromosome conformation capture; Chromatin; Chromosome; Computational biology; Biology; Population; Genetics; DNA; Gene; Gene expression; Medicine","score_opus":0.028617633078491304,"score_gpt":0.401524161847526,"score_spread":0.3729065287690347,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W907204266","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.29232252,0.0009958105,0.7054752,0.0001269324,0.00012866949,0.00015003566,0.000033089043,0.0000046760388,0.00076304434],"genre_scores_gemma":[0.21868493,0.00005962322,0.7806546,0.00034513575,0.000023581968,0.000029599923,0.00014609729,0.00002063107,0.000035805264],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9966694,0.0019926347,0.0004974504,0.00044544175,0.000091004214,0.00030402854],"domain_scores_gemma":[0.99867344,0.00019342774,0.00024843935,0.0006293062,0.00017387813,0.000081518185],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002502611,0.00020967965,0.0005144104,0.00020614071,0.000031951742,0.000011146026,0.00047353504,0.00027930265,0.000013162651],"category_scores_gemma":[0.0009510518,0.00016082902,0.00024611352,0.0006576666,0.00022597318,0.0000020783748,0.00023058415,0.00016916069,0.0000015865525],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009268879,0.000059963273,0.0031693317,0.0000065113654,0.00086159824,0.0000056218196,0.0002570414,0.0033853708,0.9764919,0.012287573,0.000027052187,0.0033553408],"study_design_scores_gemma":[0.0018058874,0.0019562463,0.0042359,0.000014121077,0.0010732705,0.00003299319,0.0016805085,0.057063077,0.9065501,0.017017124,0.007851065,0.0007196761],"about_ca_topic_score_codex":0.00014130383,"about_ca_topic_score_gemma":0.00015374186,"teacher_disagreement_score":0.07517938,"about_ca_system_score_codex":0.00003116476,"about_ca_system_score_gemma":0.00012470134,"threshold_uncertainty_score":0.6558417},"labels":[],"label_agreement":null},{"id":"W91379740","doi":"10.1007/978-1-60761-820-1_25","title":"Bioinformatics Techniques in Microarray Research: Applied Microarray Data Analysis Using R and SAS Software","year":2010,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Gene expression and cancer classification","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"National Institute of Dental and Craniofacial Research","keywords":"Microarray databases; Gene chip analysis; Computer science; Microarray analysis techniques; Microarray; Presentation (obstetrics); DNA microarray; Software; Data mining; Data science; Interpretation (philosophy); Bioinformatics; Computational biology; Gene; Biology; Gene expression; Genetics; Medicine; Programming language","score_opus":0.08746917531912311,"score_gpt":0.4582007673240037,"score_spread":0.3707315920048806,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W91379740","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.181557,0.0005520461,0.81709725,0.00007981926,0.000083784114,0.00027879822,0.000024307323,0.000014091337,0.00031292654],"genre_scores_gemma":[0.059525173,0.00016673555,0.9396324,0.00020922258,0.000044624863,0.000042648808,0.000333283,0.000020615385,0.000025279958],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9977327,0.00068132125,0.00042079086,0.00069552416,0.000092719834,0.00037695607],"domain_scores_gemma":[0.99836844,0.00006628045,0.00011626906,0.0012968247,0.00007685083,0.000075333424],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003365105,0.00017904969,0.00029759872,0.0007128873,0.00006740744,0.000032515552,0.0006199967,0.00048201947,0.000013815254],"category_scores_gemma":[0.00059501943,0.00016972232,0.00005068434,0.0009078511,0.0003303721,0.00000603266,0.00061919424,0.00046970008,9.442429e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000029795805,0.000033137087,0.004717937,0.000015631054,0.00004399662,0.000001528817,0.000075592325,0.000010624503,0.9602615,0.00015347089,0.000052925778,0.03460381],"study_design_scores_gemma":[0.00029205403,0.000043785236,0.0008935641,0.000009396957,0.00003322669,0.000008305999,0.0001875285,0.00069019635,0.9793203,0.0009853241,0.017309729,0.00022661695],"about_ca_topic_score_codex":0.000066680215,"about_ca_topic_score_gemma":0.00023187119,"teacher_disagreement_score":0.122535184,"about_ca_system_score_codex":0.000020742964,"about_ca_system_score_gemma":0.000108140324,"threshold_uncertainty_score":0.69210756},"labels":[],"label_agreement":null},{"id":"W91472896","doi":"10.1007/978-1-60327-164-6_10","title":"Determination of Virus Abundance by Epifluorescence Microscopy","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":32,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Virus; Fluorescence microscope; Nucleic acid; Microscopy; Fluorescence; Biology; Infectivity; Chemistry; Virus quantification; Virology; Biochemistry; Pathology; Optics; Medicine","score_opus":0.00971219596463059,"score_gpt":0.37740089495966106,"score_spread":0.3676886989950305,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W91472896","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.16951548,0.00012342879,0.8292497,0.00012642659,0.000100285666,0.00008768334,0.000008831707,0.000007896111,0.0007802602],"genre_scores_gemma":[0.090960875,0.000044160457,0.90843034,0.00044566437,0.000004397616,0.000004951079,0.0000069247103,0.000004882024,0.0000978012],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99913126,0.00027177305,0.00019913609,0.00021076824,0.000027148337,0.00015991234],"domain_scores_gemma":[0.999685,0.000040945735,0.000083294006,0.00016116047,0.000005245418,0.000024388228],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00027579252,0.00008088772,0.00013617813,0.000031834974,0.000022104363,0.00000496127,0.00016636716,0.000084525185,0.00027401483],"category_scores_gemma":[0.000067675064,0.00007939122,0.000041095416,0.00014779324,0.00013720982,0.00004564162,0.000046732104,0.00009987944,0.000017871746],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000008122722,0.000050774972,0.0003013209,0.0000011525949,8.5663663e-7,0.000002046094,0.00003933026,0.000003994046,0.89736754,0.000055268494,0.000049263443,0.10212031],"study_design_scores_gemma":[0.00010044769,0.000107143256,0.0062143495,0.0000072875555,0.0000029882822,0.000006446947,0.0000036360668,0.0001290908,0.98717606,0.0015501126,0.004624899,0.000077560086],"about_ca_topic_score_codex":0.00022257437,"about_ca_topic_score_gemma":0.000023791505,"teacher_disagreement_score":0.10204275,"about_ca_system_score_codex":0.000051706254,"about_ca_system_score_gemma":0.000003468321,"threshold_uncertainty_score":0.323748},"labels":[],"label_agreement":null},{"id":"W91916607","doi":"10.1007/978-1-4939-2269-7_23","title":"Chemical Genomic Profiling via Barcode Sequencing to Predict Compound Mode of Action","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":46,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia; Occupational Cancer Research Centre; University of Toronto","funders":"National Institute of General Medical Sciences; National Human Genome Research Institute; Canadian Institutes of Health Research","keywords":"Barcode; Profiling (computer programming); Computational biology; Mode of action; Genomics; Saccharomyces cerevisiae; DNA sequencing; Computer science; Biology; Genetics; DNA; Gene; Genome; Biochemistry","score_opus":0.03406619873020545,"score_gpt":0.38280639337506567,"score_spread":0.3487401946448602,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W91916607","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.53988934,0.000060075938,0.45931852,0.0002777481,0.00009007133,0.00021356696,0.0000026913633,0.000014366028,0.00013365269],"genre_scores_gemma":[0.48731822,0.0000043620985,0.5123074,0.00027770532,0.000061464125,0.0000017150733,0.000010388074,0.000009400412,0.000009336559],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9985909,0.0004697653,0.0003159323,0.00034411118,0.000053955686,0.000225325],"domain_scores_gemma":[0.9994191,0.00011690158,0.00007427608,0.00026448557,0.000058304304,0.00006694216],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00076519465,0.00012493198,0.00038878564,0.00014561153,0.000016593911,0.0000029304088,0.000108998276,0.00018474282,0.00001630222],"category_scores_gemma":[0.0007874672,0.000100819336,0.000071439485,0.00017298831,0.000076037315,0.000011971299,0.00007768801,0.00022399219,0.0000029422292],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000115890274,0.000022819142,0.00036772323,0.0000679556,0.000023740535,0.0000033479491,0.00003760887,0.000060755137,0.97398657,0.00024426685,0.0000062668114,0.025063084],"study_design_scores_gemma":[0.00027849647,0.00013217065,0.000089328474,0.00004030604,0.000032551732,0.00004254819,0.000011132217,0.0034017335,0.99420273,0.0011370099,0.00053342956,0.00009858277],"about_ca_topic_score_codex":0.000088333654,"about_ca_topic_score_gemma":0.0000029879616,"teacher_disagreement_score":0.052988894,"about_ca_system_score_codex":0.00011086371,"about_ca_system_score_gemma":0.000041816245,"threshold_uncertainty_score":0.41112933},"labels":[],"label_agreement":null},{"id":"W92163274","doi":"10.1007/978-1-61779-591-6_8","title":"DNA Barcoding in Mammals","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":99,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"","keywords":"DNA barcoding; Biology; Taxon; Identification (biology); Evolutionary biology; Cytochrome c oxidase subunit I; Scope (computer science); Computational biology; Taxonomic rank; Barcode; Vertebrate; Species complex; Mitochondrial DNA; Ecology; Computer science; Gene; Genetics; Phylogenetic tree","score_opus":0.0468738243577878,"score_gpt":0.4204228940641291,"score_spread":0.3735490697063413,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W92163274","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.3831771,0.0014082872,0.6113284,0.00028649115,0.00055624614,0.00021469216,0.0000047794383,0.000013893888,0.003010059],"genre_scores_gemma":[0.7352452,0.00007378673,0.26369473,0.00042880437,0.000085744105,0.00007492377,0.000080503334,0.000020946283,0.00029536142],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9978822,0.0009711124,0.00036670803,0.00033779853,0.000049565595,0.00039262383],"domain_scores_gemma":[0.9993496,0.0000408459,0.00008408523,0.0004230378,0.000035225945,0.00006718296],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0019547662,0.00013527206,0.00017305948,0.0001968464,0.00002910625,0.000011029718,0.00023054887,0.00024452884,0.000058556434],"category_scores_gemma":[0.0005572842,0.00014134792,0.00006840491,0.0002542063,0.00010141261,0.0000042404854,0.000102641854,0.0001320309,0.000030608717],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000012245176,0.000067077926,0.019622883,0.000006446131,0.000009109877,8.5439177e-7,0.000054812175,0.000008610814,0.9611625,0.014460307,0.000060212988,0.004534929],"study_design_scores_gemma":[0.00032844523,0.000033473923,0.00887335,0.000006152409,0.000004158139,0.000010427597,0.00007143078,0.000029841622,0.9521144,0.00066387677,0.037678346,0.00018607159],"about_ca_topic_score_codex":0.000010769117,"about_ca_topic_score_gemma":0.00000936843,"teacher_disagreement_score":0.3520681,"about_ca_system_score_codex":0.000021243792,"about_ca_system_score_gemma":0.000025809331,"threshold_uncertainty_score":0.5764001},"labels":[],"label_agreement":null},{"id":"W92851269","doi":"10.1007/978-1-60761-421-0_6","title":"In Vivo Modulation of Gene Expression by Lentiviral Transduction in “Human Immune System” Rag2−/−γc −/− Mice","year":2006,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Virus-based gene therapy research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":11,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Immune system; Biology; Haematopoiesis; Progenitor cell; CD11c; Transduction (biophysics); Myeloid; Immunology; Ex vivo; Cell biology; Dendritic cell; Cancer research; Stem cell; In vivo; Phenotype; Gene; Genetics","score_opus":0.014672273193343022,"score_gpt":0.3647305319363963,"score_spread":0.3500582587430533,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W92851269","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.7711388,0.0022931907,0.22590002,0.000042889227,0.000099133424,0.00033517714,0.000016629021,0.0000069284138,0.00016722588],"genre_scores_gemma":[0.9430821,0.00004971506,0.05638198,0.000026698148,0.00005269647,0.00008581511,0.00018357154,0.00003395,0.00010347026],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9960008,0.0022886624,0.00065962324,0.0005520196,0.000114851,0.00038403098],"domain_scores_gemma":[0.9993386,0.000028068362,0.00014856388,0.0004066013,0.00005015833,0.00002800425],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0017225967,0.0002115669,0.00037713046,0.00034227234,0.000029604103,0.00000647131,0.00026591585,0.00041153783,0.000024652694],"category_scores_gemma":[0.000044961336,0.00022351208,0.000107228305,0.00034731143,0.00013140102,0.000007696854,0.00006077269,0.00020678145,6.971276e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0005864537,0.00016884599,0.0016298722,0.000042907584,0.000012134017,0.000008478712,0.000033427645,0.001810858,0.9946231,0.00011004454,0.000020933589,0.00095290446],"study_design_scores_gemma":[0.0015226101,0.00059659075,0.0005516145,0.000032149354,0.000004293913,0.000006337224,0.00003843295,0.00047690127,0.9958373,0.0005173057,0.00021842618,0.0001980722],"about_ca_topic_score_codex":0.0006855631,"about_ca_topic_score_gemma":0.0002546077,"teacher_disagreement_score":0.17194329,"about_ca_system_score_codex":0.00008364644,"about_ca_system_score_gemma":0.000038906786,"threshold_uncertainty_score":0.9114558},"labels":[],"label_agreement":null},{"id":"W95893795","doi":"10.1007/978-1-60327-310-7_14","title":"Moving Closer to the Lipid Raft Proteome Using Quantitative Proteomics","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Stable isotope labeling by amino acids in cell culture; Raft; Lipid raft; Proteome; Sphingolipid; Chemistry; Biochemistry; Membrane; Proteomics; Quantitative proteomics; Membrane protein; Cell biology; Biology","score_opus":0.02958802170288705,"score_gpt":0.4046522632823088,"score_spread":0.37506424157942175,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W95893795","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.46902558,0.00012947316,0.529082,0.00059690705,0.00023606293,0.00077169243,0.000006828443,0.000010726022,0.00014073704],"genre_scores_gemma":[0.1132399,0.000013862543,0.88388604,0.0023814342,0.00026385914,0.000083136525,0.000025989086,0.000027964752,0.0000777956],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9975412,0.00096776115,0.00034996777,0.0005872405,0.00008500805,0.00046882386],"domain_scores_gemma":[0.9991134,0.00003183611,0.00010666765,0.0005807691,0.00008388444,0.00008348855],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010715178,0.00026498656,0.00029915737,0.000120322205,0.00009499602,0.00002531927,0.00044577674,0.0003014341,0.000010820398],"category_scores_gemma":[0.00054251973,0.00019307755,0.00013363274,0.0003141923,0.00009821961,0.0000040552195,0.00016887538,0.00026621312,0.000004638549],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000100515004,0.000033575456,0.0003193063,0.0000056619206,0.000019392453,0.0000066812418,0.00010585607,0.0003604833,0.99093634,0.0007319388,0.000016491653,0.007363733],"study_design_scores_gemma":[0.00035080398,0.0005791953,0.0006444406,0.0000137405805,0.000023789114,0.000031858843,0.000056054247,0.00013828612,0.989652,0.0007607385,0.0074706296,0.0002784665],"about_ca_topic_score_codex":0.000030431976,"about_ca_topic_score_gemma":0.000017950166,"teacher_disagreement_score":0.35578567,"about_ca_system_score_codex":0.0000292877,"about_ca_system_score_gemma":0.00009071686,"threshold_uncertainty_score":0.78734744},"labels":[],"label_agreement":null},{"id":"W98365741","doi":"10.1007/978-1-62703-281-0_3","title":"Epigenomics: Sequencing the Methylome","year":2013,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"BC Cancer Agency; Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"National Institute of Environmental Health Sciences; Canadian Institutes of Health Research","keywords":"Massive parallel sequencing; DNA methylation; Epigenomics; DNA sequencing; Massively parallel; Computational biology; Methylated DNA immunoprecipitation; Biology; DNA; Illumina Methylation Assay; Methylation; Restriction enzyme; Genome; Genetics; Computer science; Parallel computing; Gene","score_opus":0.02246747510531859,"score_gpt":0.3645325018782613,"score_spread":0.3420650267729427,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W98365741","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.2811573,0.0051756417,0.7107242,0.0004220044,0.00021346605,0.00033954973,0.0000025284662,0.000009543782,0.0019557565],"genre_scores_gemma":[0.25785568,0.0005624973,0.7398877,0.0009674602,0.00015777492,0.00019226204,0.00005347454,0.000044272692,0.00027886935],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9974596,0.0012889135,0.00036759657,0.00044180307,0.000059732614,0.00038235518],"domain_scores_gemma":[0.999044,0.00011293868,0.00010575594,0.00059366855,0.0000814213,0.000062204505],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0016233834,0.00018950341,0.0002075514,0.00008807913,0.00007346614,0.000028911305,0.000379744,0.00026918005,0.000060289763],"category_scores_gemma":[0.00053723535,0.00014204915,0.000114187154,0.00018384986,0.00016235653,0.0000027404246,0.00020084536,0.00019141927,0.000027925054],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000005477409,0.000010204279,0.001180036,0.0000042102174,0.000025754432,0.0000014016433,0.000049597256,0.00024147361,0.97087777,0.0011919194,0.000021451619,0.026390713],"study_design_scores_gemma":[0.0002158608,0.00013015873,0.001413173,0.0000038679805,0.0000096065105,0.000003981593,0.00008679382,0.0003285325,0.95629877,0.02326331,0.018038686,0.00020725901],"about_ca_topic_score_codex":0.00016882496,"about_ca_topic_score_gemma":0.000024933162,"teacher_disagreement_score":0.029163504,"about_ca_system_score_codex":0.00003798787,"about_ca_system_score_gemma":0.00007176055,"threshold_uncertainty_score":0.5792596},"labels":[],"label_agreement":null},{"id":"W9853304","doi":"10.1007/978-1-60761-322-0_13","title":"A Novel Role for Nutrition in the Alteration of Functional Microdomains on the Cell Surface","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Caveolin-1 and cellular processes","field":"Biochemistry, Genetics and Molecular Biology","cited_by":5,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"National Institute of Environmental Health Sciences; National Institute of Diabetes and Digestive and Kidney Diseases; National Cancer Institute","keywords":"Caveolae; Lipid raft; Membrane; Laurdan; Raft; Sphingolipid; Lipid microdomain; Cell biology; Chemistry; Cell; Cell membrane; Cell signaling; Biological membrane; Biochemistry; Biology; Biophysics; Signal transduction; Membrane fluidity","score_opus":0.020894441708990102,"score_gpt":0.3363446187323227,"score_spread":0.31545017702333256,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W9853304","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.32067204,0.000954481,0.67700535,0.0006510651,0.000051059247,0.00035913178,0.00001431576,0.0000020011917,0.0002905585],"genre_scores_gemma":[0.86367893,0.00008358363,0.13418442,0.001658386,0.00008426454,0.00007347459,0.00018024776,0.000009959179,0.0000467132],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99890554,0.00039075938,0.00022419123,0.00025599852,0.000053201195,0.00017033439],"domain_scores_gemma":[0.9994632,0.00014052853,0.00008137412,0.00024608476,0.000056582514,0.000012217317],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0011259001,0.00011384966,0.00013174875,0.000044826535,0.000040301355,0.000008687388,0.00018890551,0.00015807978,0.0000041548783],"category_scores_gemma":[0.00017267026,0.00007688222,0.00009138065,0.00013904777,0.00006296529,0.0000016596892,0.000020828355,0.000107805936,5.118341e-7],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00014173963,0.00027812965,0.00006134315,0.000012613641,0.0000061962055,5.239604e-7,0.000060626004,0.00046394923,0.99427336,0.0035974903,0.00006337441,0.0010406681],"study_design_scores_gemma":[0.00074438634,0.0004852916,0.0002580979,0.000009114892,0.000007633352,0.000007583228,0.00014164626,0.0002894623,0.9862075,0.007094655,0.004664386,0.00009025157],"about_ca_topic_score_codex":0.0000094735415,"about_ca_topic_score_gemma":0.0000138292,"teacher_disagreement_score":0.5430069,"about_ca_system_score_codex":0.000009831226,"about_ca_system_score_gemma":0.000037198475,"threshold_uncertainty_score":0.3135166},"labels":[],"label_agreement":null},{"id":"W98693107","doi":"10.1007/978-1-59745-477-3_4","title":"Measurement of Plant Hormones by Liquid Chromatography–Mass Spectrometry","year":2008,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Plant Stress Responses and Tolerance","field":"Agricultural and Biological Sciences","cited_by":27,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Plant Biotechnology Institute","funders":"","keywords":"Abscisic acid; Chemistry; Hormone; Mass spectrometry; Tandem mass spectrometry; Plant hormone; Chromatography; Liquid chromatography–mass spectrometry; Biochemistry; Gene","score_opus":0.029878973569038358,"score_gpt":0.2957317151902263,"score_spread":0.26585274162118794,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W98693107","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9516294,0.006418049,0.040998295,0.00020106458,0.00008665403,0.0001477604,0.00016654815,0.000026232954,0.00032599206],"genre_scores_gemma":[0.8844811,0.001249519,0.11399609,0.00014178189,0.000033871474,0.000025513487,0.000058291036,0.0000016573491,0.00001223048],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99832815,0.0006675071,0.00028232555,0.0002851478,0.0001463792,0.00029048647],"domain_scores_gemma":[0.9995755,0.00015301847,0.000105863415,0.00007489787,0.000036707712,0.00005402217],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00058389734,0.0001429294,0.00032496688,0.000045603854,0.00005369033,0.000003344339,0.00024951788,0.00013847405,0.00004329265],"category_scores_gemma":[0.0001141074,0.000060835595,0.00011558462,0.00042292662,0.00013905086,0.000016731976,0.000042435022,0.00011606345,0.0000016813206],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00015627244,0.000065319684,0.0035105832,0.0000045607258,0.000021110876,0.000030078148,0.000009343922,0.000001636559,0.9929658,0.00016235745,0.00007270089,0.003000211],"study_design_scores_gemma":[0.00017877539,0.00064615527,0.017865174,0.000020689975,0.000005578678,0.000044660934,0.000015417365,0.000022977205,0.97308695,0.00038986048,0.0075511932,0.00017254784],"about_ca_topic_score_codex":0.00017845504,"about_ca_topic_score_gemma":0.000026668667,"teacher_disagreement_score":0.07299779,"about_ca_system_score_codex":0.000015071086,"about_ca_system_score_gemma":0.000008558253,"threshold_uncertainty_score":0.24808036},"labels":[],"label_agreement":null},{"id":"W992419386","doi":"10.1007/978-1-4939-2684-8_15","title":"The Use of HPLC for the Characterization of Phytoplankton Pigments","year":2015,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Marine and coastal ecosystems","field":"Earth and Planetary Sciences","cited_by":9,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université du Québec à Rimouski","funders":"","keywords":"Pigment; Chromatography; Characterization (materials science); High-performance liquid chromatography; Extraction (chemistry); Chemistry; Carotenoid; Pyridine; Materials science; Organic chemistry; Nanotechnology; Biochemistry","score_opus":0.07349980399034664,"score_gpt":0.3380383461726809,"score_spread":0.2645385421823343,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W992419386","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.22136821,0.00025135867,0.7769666,0.00015479485,0.000447608,0.00034651047,0.00006785648,0.0000035626574,0.0003935005],"genre_scores_gemma":[0.63820463,0.0003019881,0.3595482,0.00057075743,0.00013111976,0.000039666964,0.00045238427,0.000010738494,0.00074047904],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.9991475,0.00043960227,0.00018896158,0.000081168575,0.000042901043,0.00009987748],"domain_scores_gemma":[0.9992455,0.00043632838,0.00011179347,0.00014853051,0.000041221916,0.000016592541],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0010430064,0.00004638098,0.00011348094,0.00002492664,0.00002362842,0.0000067236774,0.00014123817,0.00004079962,0.000012074864],"category_scores_gemma":[0.0002808259,0.000024152467,0.00003139583,0.00009574713,0.000057650126,0.000021134128,0.00001639891,0.000035484158,7.1768403e-7],"study_design_candidate":"design_other","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00018169229,0.000016071777,0.1958759,0.000028438993,0.000044385284,9.539207e-7,0.00012505901,0.0004932001,0.1357996,0.0017874481,0.0000367286,0.66561055],"study_design_scores_gemma":[0.0013407161,0.0012823006,0.168733,0.00003505195,0.000058991034,0.000012706605,0.00021135235,0.10950456,0.19271563,0.013176664,0.51262045,0.00030856262],"about_ca_topic_score_codex":0.00065971265,"about_ca_topic_score_gemma":0.00027044612,"teacher_disagreement_score":0.665302,"about_ca_system_score_codex":0.000001147933,"about_ca_system_score_gemma":0.00002128095,"threshold_uncertainty_score":0.09972926},"labels":[],"label_agreement":null},{"id":"W99462207","doi":"10.1007/978-1-62703-128-8_23","title":"In Vitro Methods to Culture Primary Human Breast Epithelial Cells","year":2012,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Cancer Cells and Metastasis","field":"Medicine","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"CancerCare Manitoba; University of Manitoba","funders":"","keywords":"Stem cell; Reduction Mammoplasty; Cancer stem cell; In vitro; Cancer research; Breast cancer; Biology; Cell culture; Cancer; Pathology; Cell biology; Medicine; Biochemistry; Genetics","score_opus":0.025271258494621755,"score_gpt":0.43265454055182,"score_spread":0.40738328205719826,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W99462207","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.02888564,0.0025409162,0.96194226,0.0007222147,0.0009860927,0.0006567309,0.000047316487,0.000031142044,0.0041876985],"genre_scores_gemma":[0.0047298674,0.00005064502,0.98936313,0.0048913746,0.00029547783,0.00008301292,0.000036988422,0.000038249782,0.0005112712],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9963316,0.0020409822,0.00043590544,0.00043216263,0.0000953578,0.0006640258],"domain_scores_gemma":[0.99905473,0.000118107404,0.00007743773,0.00045045852,0.00004356662,0.00025571382],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0031665636,0.00025083477,0.0007334279,0.00033879312,0.000029337873,0.0000065516047,0.0001690157,0.0002905406,0.00016580943],"category_scores_gemma":[0.00014155061,0.00020914912,0.00017343131,0.0005155918,0.00009171958,0.000038022285,0.00016577958,0.00044181992,0.000021204678],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00019740526,0.00018240706,0.00041616568,0.000045245255,0.00003382401,0.000033943877,0.00042704662,0.0000024447206,0.8851645,0.00043616552,0.00014483946,0.11291603],"study_design_scores_gemma":[0.0009961642,0.0001314831,0.0010498465,0.000017964214,0.000058529942,0.000099741774,0.000051270184,0.0000028408313,0.88824344,0.0007665872,0.108378395,0.00020374755],"about_ca_topic_score_codex":0.00023279169,"about_ca_topic_score_gemma":0.000008048438,"teacher_disagreement_score":0.11271228,"about_ca_system_score_codex":0.00019776083,"about_ca_system_score_gemma":0.000057642963,"threshold_uncertainty_score":0.85288537},"labels":[],"label_agreement":null},{"id":"W99758426","doi":"10.1007/978-1-60327-565-1_9","title":"Molecular Phylogenetics: Testing Evolutionary Hypotheses","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":2,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Dalhousie University","funders":"","keywords":"Genome; Phylogenetic tree; Phylogenetics; Biology; Evolutionary biology; Extant taxon; Tree of life (biology); Molecular evolution; Gene; Phylogenetic network; Computational biology; Genetics","score_opus":0.03191863462600336,"score_gpt":0.35293935613921623,"score_spread":0.32102072151321287,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W99758426","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6349559,0.012763776,0.3464467,0.00027052374,0.00023356127,0.00033384116,0.000015875119,0.000015470468,0.004964391],"genre_scores_gemma":[0.46452704,0.00013935793,0.5341128,0.0010330196,0.000085367676,0.000027962962,0.000017431756,0.000024341307,0.000032636857],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99755734,0.0006570602,0.0004156329,0.00072101614,0.00008713155,0.0005618137],"domain_scores_gemma":[0.9990028,0.00008876485,0.00011677327,0.00058035355,0.00011889059,0.00009241405],"candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.00059599313,0.00032389603,0.0003487014,0.00014719527,0.000080510355,0.000015045299,0.00040357787,0.00030482572,0.000007076475],"category_scores_gemma":[0.00085052254,0.00032823425,0.0001487631,0.00029136954,0.00018238052,7.052102e-7,0.00020140546,0.00016858784,0.0000052105265],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00002826881,0.00007279072,0.006743338,0.0000049521473,0.000046770783,0.000020890822,0.000018579094,0.00088129623,0.95541155,0.0015885666,0.000031548952,0.035151433],"study_design_scores_gemma":[0.0006797338,0.0010594843,0.026915442,0.000015985534,0.000032864915,0.000059721853,0.000042796415,0.00032829255,0.92284083,0.036333743,0.0110799465,0.0006111344],"about_ca_topic_score_codex":0.000017513106,"about_ca_topic_score_gemma":0.0000036864858,"teacher_disagreement_score":0.18766615,"about_ca_system_score_codex":0.000026210742,"about_ca_system_score_gemma":0.00008109185,"threshold_uncertainty_score":0.999917},"labels":[],"label_agreement":null},{"id":"W99830298","doi":"10.1007/978-1-60327-164-6_19","title":"Phage Production and Maintenance of Stocks, Including Expected Stock Lifetimes","year":2009,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":110,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université Laval; Université de Sherbrooke","funders":"","keywords":"Bacteriophage; Organism; Biology; Stock (firearms); Biochemical engineering; Biotechnology; Computational biology; Genetics; Engineering; Gene","score_opus":0.020341445300993025,"score_gpt":0.37246723898795553,"score_spread":0.3521257936869625,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W99830298","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.68749523,0.00017844404,0.31057408,0.00043418605,0.0001472196,0.00018509608,0.000002210878,0.000016193659,0.0009673329],"genre_scores_gemma":[0.5663767,0.00003077314,0.4332635,0.00014204645,0.00001136666,0.0000068169056,0.0000020730683,0.000004641597,0.00016208304],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990529,0.00030939866,0.00018895551,0.0002614555,0.000027123224,0.0001601772],"domain_scores_gemma":[0.9997023,0.000032146167,0.000081055725,0.00015088714,0.00000725463,0.000026393665],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034343588,0.00008811586,0.00016007388,0.00005279003,0.000034954162,0.0000045567945,0.00008895245,0.000069979134,0.00015139082],"category_scores_gemma":[0.0002442788,0.0000797671,0.000029873747,0.0001744023,0.00013182915,0.000051939074,0.00009114321,0.000113502356,0.0000030992423],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000014987145,0.000038580514,0.0011291228,0.000001923114,0.0000039734523,0.0000026999396,0.00016202063,0.000031296073,0.9564554,0.0000843109,0.00005192614,0.04202375],"study_design_scores_gemma":[0.00021434133,0.00022239362,0.068427876,0.000030670835,0.000010803829,0.000046819034,0.00007364873,0.00014958344,0.92653424,0.0021166834,0.0020113257,0.00016159198],"about_ca_topic_score_codex":0.000096228585,"about_ca_topic_score_gemma":0.000020999734,"teacher_disagreement_score":0.12268941,"about_ca_system_score_codex":0.000045242774,"about_ca_system_score_gemma":0.0000035647047,"threshold_uncertainty_score":0.32528082},"labels":[],"label_agreement":null},{"id":"W99972145","doi":"10.1007/978-1-4939-0799-1_4","title":"Yeast Transformation by the LiAc/SS Carrier DNA/PEG Method","year":2014,"lang":"en","type":"article","venue":"Methods in molecular biology","topic":"Fungal and yeast genetics research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":653,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"","keywords":"Transformation (genetics); Yeast; Notice; PEG ratio; Saccharomyces cerevisiae; Microtiter plate; Transformation efficiency; Biology; Molecular biology; Genetics; Gene; Business; Political science; Agrobacterium","score_opus":0.015283620987695423,"score_gpt":0.39213344458673194,"score_spread":0.3768498235990365,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W99972145","genre_codex":"methods","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"codex-gemma-dda1882f352a","genre_candidate":"methods","genre_consensus":"methods","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.041595243,0.0010006675,0.9516793,0.00068224623,0.00028884198,0.0002861016,0.000039945055,0.000011084244,0.0044165542],"genre_scores_gemma":[0.27825785,0.00031065536,0.71492875,0.0028514916,0.00036243204,0.0002979896,0.00049128284,0.00010230173,0.0023972816],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9959158,0.002716051,0.00031647747,0.0004596115,0.00012963514,0.0004624534],"domain_scores_gemma":[0.99912876,0.000091294394,0.00006381749,0.00053998217,0.000079998994,0.00009614271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0026106117,0.00021190877,0.00023470928,0.000078266436,0.00008938647,0.000025371059,0.0004900027,0.00033682163,0.000035440506],"category_scores_gemma":[0.00041889053,0.00015572463,0.00013457102,0.00022396873,0.00018165717,0.0000026772298,0.00015276101,0.00027590158,0.000010937022],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000043948723,0.000026879225,0.00016723375,0.000011339675,0.00003091359,7.64037e-7,0.0000734748,0.000088343746,0.9430897,0.0014020335,0.0004455493,0.054619774],"study_design_scores_gemma":[0.00038865904,0.00022392992,0.0000918479,0.0000040665273,0.000010294759,0.000015718191,0.00004388195,0.0010472655,0.8032051,0.0018409308,0.1929572,0.0001711481],"about_ca_topic_score_codex":0.00005045401,"about_ca_topic_score_gemma":0.000025206575,"teacher_disagreement_score":0.2367506,"about_ca_system_score_codex":0.000016631298,"about_ca_system_score_gemma":0.00004808026,"threshold_uncertainty_score":0.63502663},"labels":[],"label_agreement":null}]}