{"meta":{"query_hash":"0a1957b19dcc","filters":{"venue":"Microbial Physiology"},"cohort_total":34,"direct_labels_cover":0,"predictions_cover":34,"exported":34,"export_cap":100000,"truncated":false,"label_status":"direct model label, unvalidated","prediction_status":"machine_predicted_unvalidated (Codex and Gemma teacher distillation)","score_status":"score_only:v0-immature-baseline","snapshot":{"source":"OpenAlex, pinned release, all 482 partitions","release":"2026-06-24","frame_built":"2026-07-12"},"permalink":"https://metacan.xera.ac/q/0a1957b19dcc","api":"https://metacan.xera.ac/api/v1/cohort?venue=Microbial+Physiology"},"results":[{"id":"W1504962413","doi":"10.1159/000121330","title":"Use of&lt;i&gt; Mycobacterium austroafricanum&lt;/i&gt; IFP 2012 in a MTBE-Degrading Bioreactor","year":2008,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Mycobacterium research and diagnosis","field":"Medicine","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Biotechnology Research Institute","funders":"","keywords":"Chemistry; Biofilter; Biodegradation; Effluent; Biomass (ecology); Environmental chemistry; Methyl tert-butyl ether; Chromatography; Pulp and paper industry; Environmental engineering; Ether; Environmental science; Organic chemistry; Ecology","score_opus":0.04207841450784138,"score_gpt":0.26508789101940916,"score_spread":0.22300947651156777,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1504962413","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9916577,0.00044259563,0.005132542,0.00023014547,0.00006642199,0.00014001693,0.00067288097,0.00020665926,0.0014510311],"genre_scores_gemma":[0.97009957,0.00058169675,0.023134409,0.00010172867,0.000033324242,0.00025797402,0.0017250759,0.00006175648,0.00400451],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9993722,0.000053922256,0.00008980073,0.00018206381,0.00018984037,0.000112298454],"domain_scores_gemma":[0.9997981,0.000020024163,0.000060330356,0.000033802815,0.000033815162,0.000053903786],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00034623564,0.0011444336,0.00082766893,0.00038159752,0.00031304918,0.000607547,0.00061807036,0.00067326525,0.0006405865],"category_scores_gemma":[0.00036219813,0.00027423416,0.0005670027,0.0005211475,0.00019908667,0.00028569467,0.0005368331,0.00067178695,0.00084734167],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049944756,0.000043044973,0.00016678065,0.00003024182,0.0000046060673,0.000056900917,0.000009485675,0.00006608905,0.9984463,0.000006749651,0.00001544819,0.0011043116],"study_design_scores_gemma":[0.00001692971,0.00063845766,0.0041520554,0.000012438335,0.00004181728,0.000310889,0.000050344624,0.0006682838,0.9930057,0.000011135328,0.0010777893,0.0000143322],"about_ca_topic_score_codex":0.0050267726,"about_ca_topic_score_gemma":0.004088452,"teacher_disagreement_score":0.0050267726,"about_ca_system_score_codex":0.00030647207,"about_ca_system_score_gemma":0.00047625022,"threshold_uncertainty_score":0.009994984},"labels":[],"label_agreement":null},{"id":"W1537423632","doi":"10.1159/000121326","title":"Diversity of the C-Terminal Portion of the Biphenyl Dioxygenase Large Subunit","year":2008,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":31,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Phylogenetic tree; Biphenyl; Bacteria; Enzyme; Context (archaeology); Stereospecificity; Stereochemistry; Chemistry; Dioxygenase; Biology; Biochemistry; Catalysis; Genetics; Gene; Organic chemistry","score_opus":0.01097868716413607,"score_gpt":0.18645941903857005,"score_spread":0.17548073187443397,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1537423632","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99764866,0.00059138885,0.0009775119,0.00002443034,0.0000032994583,0.000006324121,0.00025670195,0.0000084804,0.00048314032],"genre_scores_gemma":[0.99720794,0.00044077908,0.0008945867,0.000027758273,0.00000975055,0.000008955683,0.00096283405,0.0000064106985,0.00044085938],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99985325,0.000017711649,0.000014488122,0.000047371177,0.000038830618,0.000028219745],"domain_scores_gemma":[0.99957937,0.00010071,0.00013262873,0.000037455276,0.00006781912,0.00008205167],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008382529,0.0001867359,0.0001806708,0.0005282004,0.00013132888,0.0003837144,0.00014392022,0.00022048103,0.00047681847],"category_scores_gemma":[0.00030770787,0.00012499759,0.00017271939,0.0004088222,0.00019650314,0.00024466633,0.00021277412,0.00029201858,0.00031789404],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00009098815,0.00001257835,0.0093795,0.000038812534,0.0000133150925,0.00010200554,0.000084807776,0.000060803097,0.9870646,0.000045455803,0.000014931008,0.0030922254],"study_design_scores_gemma":[0.000017046485,0.0005738813,0.7448313,0.000044002198,0.00012388194,0.003579432,0.00047787995,0.0012901486,0.24411213,0.00032969468,0.004596393,0.000024164436],"about_ca_topic_score_codex":0.00037984794,"about_ca_topic_score_gemma":0.00032240362,"teacher_disagreement_score":0.0005282004,"about_ca_system_score_codex":0.000110254936,"about_ca_system_score_gemma":0.0001246567,"threshold_uncertainty_score":0.0015950799},"labels":[],"label_agreement":null},{"id":"W1967297927","doi":"10.1159/000092819","title":"Mass Spectrometric Identification of Proteins in Complex Post-Genomic Projects","year":2006,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Advanced Proteomics Techniques and Applications","field":"Chemistry","cited_by":28,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Canadian Institute for Theoretical Astrophysics","keywords":"Computational biology; Identification (biology); Proteomics; Mass spectrometry; Computer science; Bioinformatics; Chemistry; Biology; Biochemistry; Chromatography","score_opus":0.0122067548884329,"score_gpt":0.24909625215358894,"score_spread":0.23688949726515604,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1967297927","genre_codex":"empirical","genre_gemma":"methods","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"methods","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.70108116,0.012930026,0.26491365,0.0010319105,0.0002431278,0.0006763563,0.00800775,0.0040445803,0.007071432],"genre_scores_gemma":[0.45946983,0.008403173,0.5092507,0.00048043788,0.00012503446,0.00068479957,0.016199995,0.0004993234,0.0048866477],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99928856,0.00012674327,0.000056063014,0.00020314837,0.00027006914,0.000055348173],"domain_scores_gemma":[0.99922585,0.00027396347,0.00014979612,0.00010794565,0.0001688315,0.00007353859],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00089704624,0.0007338113,0.00052016263,0.001315884,0.0005112974,0.0011953538,0.00084086176,0.0007551429,0.001130276],"category_scores_gemma":[0.0015318312,0.00028883325,0.00054514356,0.0019395734,0.00040186645,0.0008219198,0.00071291364,0.0006071803,0.0018038385],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00030413756,0.00007764495,0.0056287376,0.00055503653,0.00006704657,0.0005082631,0.00021131845,0.00085738377,0.9303491,0.0011356778,0.0007766014,0.059529003],"study_design_scores_gemma":[0.000047224647,0.00046529734,0.058291435,0.00012742389,0.00015378393,0.0036162618,0.0004727365,0.01726114,0.8743864,0.0036656577,0.04144457,0.00006811487],"about_ca_topic_score_codex":0.0003664288,"about_ca_topic_score_gemma":0.0005562704,"teacher_disagreement_score":0.001315884,"about_ca_system_score_codex":0.00048390075,"about_ca_system_score_gemma":0.00038262663,"threshold_uncertainty_score":0.0047441125},"labels":[],"label_agreement":null},{"id":"W1970767092","doi":"10.1159/000082075","title":"Salt in the Wound: A Possible Role of Na&lt;sup&gt;+&lt;/sup&gt; Gradient in Chlamydial Infection","year":2004,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Reproductive tract infections research","field":"Immunology and Microbiology","cited_by":20,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"St. Boniface Hospital; University of Manitoba","funders":"","keywords":"Molecular biology; Biology; Intracellular; Chemistry; Biochemistry","score_opus":0.021846396064747628,"score_gpt":0.3032987099997016,"score_spread":0.28145231393495396,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1970767092","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.93703365,0.027681567,0.020046126,0.0052983966,0.0009316698,0.00032355476,0.0007474167,0.00053020305,0.0074074185],"genre_scores_gemma":[0.98438895,0.004717351,0.0051338775,0.00085729454,0.00009552267,0.00006599369,0.00023354084,0.000033681827,0.00447379],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9996333,0.00006460472,0.000044946355,0.000084340994,0.0000574466,0.00011535932],"domain_scores_gemma":[0.9994856,0.000048110345,0.00011701896,0.000071534574,0.00009948789,0.00017818161],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004974533,0.0006632007,0.0012135925,0.0005107107,0.0008378409,0.001769822,0.0012105354,0.0025557457,0.0025275177],"category_scores_gemma":[0.00042568348,0.0003818927,0.00064096175,0.00030633624,0.001352633,0.0029475624,0.0012540707,0.0010843338,0.00091173814],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0013323692,0.00016514577,0.0031394968,0.0008252645,0.00003113639,0.0019185328,0.00044069314,0.00024673526,0.98105973,0.0038473052,0.00039428298,0.006599427],"study_design_scores_gemma":[0.00020765285,0.0031953868,0.070915066,0.0003754628,0.00017371618,0.004239252,0.0045218556,0.01196446,0.8644628,0.011227684,0.028453993,0.00026260372],"about_ca_topic_score_codex":0.00074070995,"about_ca_topic_score_gemma":0.0007588696,"teacher_disagreement_score":0.0025557457,"about_ca_system_score_codex":0.0009092886,"about_ca_system_score_gemma":0.00060921116,"threshold_uncertainty_score":0.008455336},"labels":[],"label_agreement":null},{"id":"W1971314022","doi":"10.1159/000356189","title":"The State of RT-Quantitative PCR: Firsthand Observations of Implementation of Minimum Information for the Publication of Quantitative Real-Time PCR Experiments (MIQE)","year":2013,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":93,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Bio-Rad (Canada)","funders":"","keywords":"Real-time polymerase chain reaction; State (computer science); Computer science; Computational biology; Biology; Programming language; Genetics; Gene","score_opus":0.024247866619627426,"score_gpt":0.31563678098712655,"score_spread":0.29138891436749914,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1971314022","genre_codex":"methods","genre_gemma":"empirical","domain_codex":null,"domain_gemma":"reporting","model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":null,"domain_candidate":"reporting","domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.046805117,0.052605737,0.53975433,0.28710073,0.015660673,0.001299686,0.0025605215,0.0042354483,0.049977843],"genre_scores_gemma":[0.26723304,0.03929599,0.5660631,0.09713152,0.006349453,0.003058475,0.0036237205,0.0038116903,0.013433026],"study_design_codex":"design_other","study_design_gemma":"observational","domain_scores_codex":[0.6695419,0.12724821,0.05849108,0.02789421,0.112021536,0.00480304],"domain_scores_gemma":[0.25181392,0.40402102,0.05605628,0.077857986,0.20541261,0.0048380787],"candidate_categories":["metaresearch"],"consensus_categories":["metaresearch"],"category_scores_codex":[0.39533168,0.0011357124,0.0018883258,0.0054762666,0.005132959,0.02163112,0.0060171327,0.007886327,0.002196949],"category_scores_gemma":[0.47786433,0.0030148148,0.00189708,0.0062115947,0.01777263,0.01792049,0.0075330925,0.025174627,0.0025004772],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00092654757,0.00039106864,0.015358465,0.009615257,0.0003610995,0.00061990245,0.014972269,0.0029229764,0.043233957,0.33660713,0.11737754,0.45761374],"study_design_scores_gemma":[0.00007378865,0.0007861892,0.010054823,0.005853307,0.00020778347,0.00086798065,0.0020914103,0.0030919227,0.057209656,0.07975427,0.8394077,0.00060117553],"about_ca_topic_score_codex":0.006174288,"about_ca_topic_score_gemma":0.0038272294,"teacher_disagreement_score":0.6046683,"about_ca_system_score_codex":0.013700364,"about_ca_system_score_gemma":0.022776756,"threshold_uncertainty_score":0.7456637},"labels":[],"label_agreement":null},{"id":"W1981557743","doi":"10.1159/000068721","title":"O-Glycosylation of a Recombinant Carbohydrate-Binding Module Mutant Secreted by &lt;i&gt;Pichia pastoris&lt;/i&gt;","year":2003,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":36,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of British Columbia","funders":"","keywords":"Pichia pastoris; Glycosylation; Mannose; Glycan; Biochemistry; Carbohydrate-binding module; Chemistry; Recombinant DNA; N-linked glycosylation; Mutant; Fusion protein; Yeast; Oligosaccharide; Glycoprotein; Molecular biology; Biology; Cellulose; Cellulase; Gene","score_opus":0.007343969009796794,"score_gpt":0.22644799814048974,"score_spread":0.21910402913069293,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1981557743","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.996458,0.00029067864,0.0017923246,0.000056596917,0.000025924637,0.00001310478,0.00047342034,0.000056786525,0.00083314074],"genre_scores_gemma":[0.9890921,0.0003069751,0.004154405,0.00006867187,0.000007809894,0.000021042479,0.0027043894,0.00004739116,0.0035972262],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99989176,0.000014266177,0.000011284667,0.000022533495,0.000031519565,0.000028668692],"domain_scores_gemma":[0.99993277,0.000010719003,0.000018444856,0.000011717323,0.000007163455,0.000019208153],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011373942,0.00046299928,0.00022298904,0.0001057306,0.00008102541,0.0002291123,0.00022159252,0.00019056263,0.00040991785],"category_scores_gemma":[0.00010379828,0.00010654219,0.00024724772,0.00025304055,0.00014419606,0.00011802279,0.00017290543,0.00044698722,0.00023989262],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000047214806,0.000016698437,0.00014873307,0.000011022666,0.0000046797836,0.00004566599,0.000007027995,0.000040273546,0.99913365,0.000038342012,0.000027825063,0.0004790113],"study_design_scores_gemma":[0.000010587801,0.00011441338,0.0042328048,0.0000031378231,0.000013635569,0.00017108767,0.000013654074,0.0011108747,0.9925328,0.000020553782,0.0017726514,0.000003881433],"about_ca_topic_score_codex":0.0017616609,"about_ca_topic_score_gemma":0.0013338152,"teacher_disagreement_score":0.0017616609,"about_ca_system_score_codex":0.0004164665,"about_ca_system_score_gemma":0.0002451915,"threshold_uncertainty_score":0.0035028458},"labels":[],"label_agreement":null},{"id":"W1990474331","doi":"10.1159/000121328","title":"Fungal Enzymes for Environmental Purposes, a Molecular Biology Challenge","year":2008,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Peroxidase; Biochemical engineering; Hydrogen peroxide; Heterologous; Substrate (aquarium); Enzyme; Biotechnology; Biology; Biochemistry; Engineering; Ecology","score_opus":0.028816123177487454,"score_gpt":0.2664151545019316,"score_spread":0.23759903132444415,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1990474331","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00047534742,0.9930178,0.0010046946,0.0010840878,0.0003390958,0.0000041444246,0.000018868968,0.000021472808,0.0040345755],"genre_scores_gemma":[0.0025663273,0.99182737,0.00090758223,0.00038725132,0.00023519585,0.000006379503,0.00003242493,0.0000040180225,0.0040335376],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99983156,0.000024064335,0.000014519787,0.00003072039,0.00008041068,0.00001862572],"domain_scores_gemma":[0.9997645,0.00008297393,0.000025907031,0.000020733098,0.00008079245,0.000025104831],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005060346,0.00078174815,0.00087961834,0.00089973223,0.00032253275,0.0012631959,0.00054366165,0.0011263555,0.0035185383],"category_scores_gemma":[0.0003805997,0.00020668066,0.00027872846,0.0013397646,0.0005704508,0.0020182147,0.0004575457,0.0015683904,0.0053735035],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00004233745,0.000047913305,0.00012810776,0.005272978,0.000026133892,0.00024022748,0.00007553904,0.00030319332,0.025359606,0.015208713,0.022967838,0.93032736],"study_design_scores_gemma":[0.0000050085832,0.00004886803,0.0002961703,0.000531714,0.000017400522,0.00081301836,0.000054153556,0.00006077498,0.0037940415,0.002685144,0.99168605,0.000007634614],"about_ca_topic_score_codex":0.0009458939,"about_ca_topic_score_gemma":0.0013625914,"teacher_disagreement_score":0.0035185383,"about_ca_system_score_codex":0.0006201566,"about_ca_system_score_gemma":0.0009757264,"threshold_uncertainty_score":0.011770725},"labels":[],"label_agreement":null},{"id":"W1992198095","doi":"10.1159/000341107","title":"Newly Isolated and Characterized Bacteria with Great Application Potential for Decomposition of Lignocellulosic Biomass","year":2012,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":51,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"","keywords":"Lignocellulosic biomass; Lignin; Cellulase; Chemistry; Food science; Xylan; Cellulose; Biomass (ecology); Carboxymethyl cellulose; Absorbance; Xylose; Bacteria; Xylanase; Firmicutes; Botany; Fermentation; Biochemistry; Biology; Organic chemistry; Sodium; Agronomy; Chromatography","score_opus":0.004976538672622405,"score_gpt":0.19452950817634918,"score_spread":0.18955296950372677,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1992198095","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99008733,0.0024938118,0.005515568,0.000096300915,0.000044845758,0.0000864062,0.00048346337,0.000032702836,0.001159592],"genre_scores_gemma":[0.9656142,0.002877915,0.024601487,0.00009837148,0.000048031485,0.00011779747,0.0035585142,0.000028732818,0.0030550566],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997912,0.00003168268,0.000026128557,0.000045762594,0.000055212964,0.000050131985],"domain_scores_gemma":[0.9998467,0.000022472263,0.000030148942,0.000015753774,0.000045895555,0.00003905617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021261633,0.00071080955,0.00046954525,0.0004459783,0.00022197464,0.00045782735,0.00026992374,0.00036544522,0.00048295446],"category_scores_gemma":[0.00032651296,0.00012448209,0.00033761954,0.00047607187,0.00014718357,0.0004609263,0.00038579706,0.0003657661,0.00038173984],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000052920346,0.00011787856,0.0021617883,0.000108522865,0.000008572131,0.0001054805,0.000060436298,0.00009308053,0.99082035,0.000052787927,0.000024486846,0.006393715],"study_design_scores_gemma":[0.00003286337,0.0013382927,0.055276826,0.00007934984,0.00016883918,0.0022098266,0.0009793849,0.0017135709,0.92949516,0.0002427797,0.008425195,0.000037798352],"about_ca_topic_score_codex":0.00086073583,"about_ca_topic_score_gemma":0.0011902744,"teacher_disagreement_score":0.00086073583,"about_ca_system_score_codex":0.00012032966,"about_ca_system_score_gemma":0.00042138106,"threshold_uncertainty_score":0.0017114878},"labels":[],"label_agreement":null},{"id":"W1994065931","doi":"10.1159/000078654","title":"Expression and Purification of Heterologous Proteins in Plant Tissue Using a Geminivirus Vector System","year":2004,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":10,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"University of Toronto","keywords":"Biology; Arabidopsis; Insert (composites); Plant virus; Heterologous expression; Heterologous; Expression vector; Arabidopsis thaliana; RNA; Computational biology; Genetics; Gene; Virus; Cell biology; Recombinant DNA","score_opus":0.030601437200702516,"score_gpt":0.2484541633435549,"score_spread":0.2178527261428524,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1994065931","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.6584809,0.004737552,0.31900814,0.0008264986,0.000320492,0.0012230163,0.00556626,0.0019547567,0.007882385],"genre_scores_gemma":[0.6755074,0.005878149,0.27616283,0.0002541131,0.00009574232,0.0006345159,0.021824153,0.00040604564,0.019237014],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997831,0.000037325182,0.000030855495,0.00005523348,0.00006495339,0.00002853517],"domain_scores_gemma":[0.9999081,0.00002135727,0.000014735918,0.000017960216,0.0000136419285,0.000024236155],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00039595983,0.0005171864,0.0004363346,0.00041722707,0.00040288444,0.00052278163,0.00049457944,0.00032412514,0.001041822],"category_scores_gemma":[0.0001997575,0.00031948063,0.00033423718,0.00045398407,0.0002546869,0.0003873788,0.00030899988,0.0009791823,0.0014140739],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000031642,0.00001430052,0.000062445135,0.000046956633,0.0000047141784,0.000024807636,0.00002164332,0.000049043294,0.9982779,0.00026413146,0.00006995163,0.0011324614],"study_design_scores_gemma":[0.000033419594,0.00021134347,0.0016824515,0.0000120664,0.000030956242,0.00037297438,0.00003137625,0.001963456,0.975927,0.00021108626,0.019512186,0.00001166132],"about_ca_topic_score_codex":0.0011799526,"about_ca_topic_score_gemma":0.0017687465,"teacher_disagreement_score":0.0011799526,"about_ca_system_score_codex":0.00066759466,"about_ca_system_score_gemma":0.0004595415,"threshold_uncertainty_score":0.004843831},"labels":[],"label_agreement":null},{"id":"W1995354591","doi":"10.1159/000096461","title":"A New Piece of an Old Jigsaw: Glucose Kinase Is Activated Posttranslationally in a Glucose Transport-Dependent Manner in &lt;i&gt;Streptomyces coelicolor &lt;/i&gt;A3(2)","year":2006,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Microbial Natural Products and Biosynthesis","field":"Medicine","cited_by":58,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Jigsaw; Streptomyces coelicolor; Biology; Genetics; Streptomyces; Psychology; Bacteria; Mathematics education","score_opus":0.008515730049069787,"score_gpt":0.23024918840748973,"score_spread":0.22173345835841995,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W1995354591","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.44809055,0.23189928,0.069446184,0.1438821,0.06251475,0.00021329742,0.0035443346,0.0050500087,0.03535954],"genre_scores_gemma":[0.7402058,0.10278669,0.026627311,0.03574817,0.014599437,0.00023222351,0.0042149615,0.0006446225,0.07494076],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9996648,0.000029958406,0.000038201502,0.00012395692,0.00007751472,0.0000655486],"domain_scores_gemma":[0.999474,0.000073093084,0.000073726944,0.0001221136,0.00010370497,0.00015344401],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004649528,0.0009618839,0.0010016508,0.00058422156,0.0010359412,0.0020733755,0.0005435331,0.0015020696,0.002728856],"category_scores_gemma":[0.0005494737,0.00037672333,0.0008179885,0.0005485171,0.001517713,0.004709729,0.001214775,0.005046547,0.0010731192],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.001367006,0.00024735005,0.0057324274,0.0017133609,0.00021687713,0.0036437318,0.0009834436,0.0004538331,0.75741875,0.023138769,0.035343684,0.16974084],"study_design_scores_gemma":[0.0001478711,0.0015329039,0.051467486,0.000575072,0.00038036666,0.008677944,0.0019106612,0.0026457536,0.2671648,0.028475408,0.63666916,0.00035268895],"about_ca_topic_score_codex":0.00028950596,"about_ca_topic_score_gemma":0.0005412432,"teacher_disagreement_score":0.002728856,"about_ca_system_score_codex":0.0005029181,"about_ca_system_score_gemma":0.0004998439,"threshold_uncertainty_score":0.009128928},"labels":[],"label_agreement":null},{"id":"W2005850676","doi":"10.1159/000119547","title":"The &lt;i&gt;Vibrio cholerae&lt;/i&gt; Mrp System: Cation/Proton Antiport Properties and Enhancement of Bile Salt Resistance in a Heterologous Host","year":2008,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Manitoba","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; Natural Sciences and Engineering Research Council of Canada","keywords":"Antiporter; Operon; Chemistry; Escherichia coli; Sodium–hydrogen antiporter; Sodium; Molecular biology; Nuclear chemistry; Biology; Biochemistry; Gene","score_opus":0.013087062280906342,"score_gpt":0.22150172611773056,"score_spread":0.20841466383682422,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2005850676","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99415165,0.00034420463,0.003462127,0.00015978725,0.00002844616,0.000038881255,0.00080063025,0.00010774938,0.00090655097],"genre_scores_gemma":[0.98713815,0.00030867205,0.0057792068,0.000069635345,0.000012347881,0.000038695678,0.0025177216,0.00011242162,0.0040231077],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997907,0.00003659951,0.00002359446,0.00004028593,0.00006170296,0.00004711308],"domain_scores_gemma":[0.99987864,0.00001979409,0.00002774434,0.000025645571,0.00001642519,0.00003173202],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00018094802,0.00037462005,0.00038860497,0.00017260185,0.00012978766,0.0004622899,0.00037288503,0.0002987344,0.0005847884],"category_scores_gemma":[0.00017933277,0.00015842445,0.00027199066,0.00027250667,0.00026721312,0.000189608,0.00029442387,0.0006239866,0.00045631675],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000022732034,0.000009304685,0.000047198955,0.0000108898,0.0000017163254,0.000026897897,0.000008806626,0.000028838773,0.9995814,0.000050333427,0.000017410086,0.00019447884],"study_design_scores_gemma":[0.000014723671,0.00015048652,0.002821383,0.0000036471315,0.000011933147,0.00028821072,0.000032469812,0.001011934,0.99291915,0.000028813422,0.0027070518,0.00001016808],"about_ca_topic_score_codex":0.0021389602,"about_ca_topic_score_gemma":0.0020961543,"teacher_disagreement_score":0.0021389602,"about_ca_system_score_codex":0.00057320646,"about_ca_system_score_gemma":0.00034202824,"threshold_uncertainty_score":0.00425303},"labels":[],"label_agreement":null},{"id":"W2013853397","doi":"10.1159/000330669","title":"Decolorizing Activity of Malachite Green and Its Mechanisms Involved in Dye Biodegradation by &lt;i&gt;Achromobacter xylosoxidans&lt;/i&gt; MG1","year":2011,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"National Key Research and Development Program of China; Department of Science and Technology, Ministry of Science and Technology, India; McMaster University","keywords":"Biodegradation; Malachite green; Achromobacter xylosoxidans; Extracellular; Microbiology; Chemistry; Bacteria; Biotransformation; Food science; Biochemistry; Biology; Enzyme; Organic chemistry","score_opus":0.018282606211208075,"score_gpt":0.19360364396706187,"score_spread":0.17532103775585378,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2013853397","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9970385,0.0010549978,0.0013899354,0.00009383814,0.000004577466,0.000010001137,0.00009070192,0.000026249116,0.00029119657],"genre_scores_gemma":[0.9978188,0.00034489133,0.00094290473,0.00002079449,0.000004067124,0.000012652614,0.00018402432,0.000008165013,0.00066378113],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99981683,0.000027471184,0.00001740054,0.000039532933,0.000046209607,0.000052579617],"domain_scores_gemma":[0.99986136,0.00002304515,0.000048507616,0.00001703723,0.000026339652,0.000023708617],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00019853807,0.0006785344,0.0004442154,0.00028263163,0.00017677885,0.00040002778,0.00025146786,0.00040524083,0.00032617198],"category_scores_gemma":[0.0002048787,0.0002315528,0.0002983621,0.00021830056,0.00039051526,0.00036499382,0.0002913881,0.00032723596,0.00021541331],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000041796207,0.000013274671,0.000593371,0.000020785375,0.0000022126792,0.000031550604,0.000021438058,0.00003845086,0.99850637,0.00003372937,0.0000049963364,0.00069203466],"study_design_scores_gemma":[0.000014176855,0.00017484033,0.019175781,0.0000057200523,0.000018956804,0.00026690747,0.00008013671,0.0010468148,0.9788014,0.000070710215,0.00033483762,0.000009876128],"about_ca_topic_score_codex":0.0022788392,"about_ca_topic_score_gemma":0.0014215824,"teacher_disagreement_score":0.0022788392,"about_ca_system_score_codex":0.00041501044,"about_ca_system_score_gemma":0.00030324273,"threshold_uncertainty_score":0.0045312047},"labels":[],"label_agreement":null},{"id":"W2020204572","doi":"10.1159/000320268","title":"Determination of &lt;i&gt;Francisella tularensis&lt;/i&gt; AcpB Acid Phosphatase Substrate Preferences","year":2010,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Toronto","funders":"","keywords":"Francisella tularensis; Francisella; Thiamine; Biochemistry; Phosphatase; Enzyme; Substrate (aquarium); Biology; Microbiology; Phosphorylation; Pathogen; Intracellular; Chemistry; Virulence; Gene","score_opus":0.009465775425706206,"score_gpt":0.2382815031838698,"score_spread":0.2288157277581636,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2020204572","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99447685,0.0005294127,0.0032095306,0.000044135566,0.0000055531227,0.000012847771,0.0005852569,0.00005024521,0.0010861476],"genre_scores_gemma":[0.99393696,0.00034447983,0.0032120845,0.000025997693,0.0000042257884,0.000017885683,0.0015004261,0.000031814692,0.00092614],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978226,0.000040562616,0.000024011708,0.0000465476,0.00005659688,0.000050075298],"domain_scores_gemma":[0.9997023,0.00008113116,0.000067894376,0.000018659863,0.00007485616,0.000055094184],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001938241,0.0003650189,0.0002726083,0.000410505,0.000080494334,0.00032510588,0.00016770758,0.0002427968,0.0006092231],"category_scores_gemma":[0.0005751501,0.0001396731,0.00011670036,0.00028780766,0.00014630205,0.00027879333,0.00016104672,0.00032692193,0.00038694066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000037676797,0.000008481342,0.00050614064,0.000009359259,0.0000015639368,0.000011057873,0.000011389299,0.000021357808,0.99872106,0.000014226608,0.000009680086,0.0006480843],"study_design_scores_gemma":[0.0000019182025,0.0001272738,0.010863322,0.000003777311,0.000011147713,0.00015776147,0.000056500245,0.0005356899,0.98755985,0.000021581467,0.0006545333,0.0000066095713],"about_ca_topic_score_codex":0.0016473517,"about_ca_topic_score_gemma":0.0013687941,"teacher_disagreement_score":0.0016473517,"about_ca_system_score_codex":0.00017030234,"about_ca_system_score_gemma":0.0001129374,"threshold_uncertainty_score":0.0032755136},"labels":[],"label_agreement":null},{"id":"W2026764734","doi":"10.1159/000094053","title":"Archaeal Flagella, Bacterial Flagella and Type IV Pili: A Comparison of Genes and Posttranslational Modifications","year":2006,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":124,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Flagellum; Pilus; Biology; Pilin; Flagellin; Caulobacter crescentus; Signal peptidase; Fimbriae Proteins; Archaea; Signal peptide; Microbiology; Gene; Genetics; Cell biology; Peptide sequence; Escherichia coli; Bacterial protein","score_opus":0.04160953440066361,"score_gpt":0.3052120614803796,"score_spread":0.263602527079716,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2026764734","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9645975,0.029162014,0.0009642152,0.00013198359,0.00004081582,0.000013156378,0.0012578616,0.000032215135,0.0038002715],"genre_scores_gemma":[0.9668237,0.020209698,0.0036250073,0.00018645485,0.00007618284,0.00003211787,0.0049248245,0.000030411775,0.0040915906],"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","domain_scores_codex":[0.9998907,0.000011597511,0.000012047617,0.00003233686,0.000029509332,0.000023735125],"domain_scores_gemma":[0.99982005,0.00002965493,0.0000471502,0.000015511549,0.00003418699,0.000053453048],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00011997746,0.00024319321,0.00020976686,0.0010265446,0.00019992709,0.0005179936,0.00017670756,0.00036053263,0.000982642],"category_scores_gemma":[0.00021270252,0.00010015011,0.00025045263,0.0011269683,0.00021853107,0.00042315177,0.00025266132,0.00022720947,0.00045789234],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00311068,0.00014601837,0.048551995,0.0012388041,0.00012230383,0.0011497933,0.0007941506,0.00026871648,0.86667967,0.0008209866,0.0004139056,0.07670303],"study_design_scores_gemma":[0.000043759792,0.0010474423,0.8912691,0.0001660175,0.0002510141,0.0045334604,0.0010381658,0.00046368229,0.061221294,0.00084094796,0.039089583,0.00003559499],"about_ca_topic_score_codex":0.00048304882,"about_ca_topic_score_gemma":0.00045859322,"teacher_disagreement_score":0.0010265446,"about_ca_system_score_codex":0.00014304325,"about_ca_system_score_gemma":0.00024405614,"threshold_uncertainty_score":0.0032872558},"labels":[],"label_agreement":null},{"id":"W2037990409","doi":"10.1159/000103597","title":"Identification of a Ribosomal L10-Like Protein from &lt;i&gt;Flavobacterium psychrophilum&lt;/i&gt; as a Recombinant Vaccine Candidate for Rainbow Trout Fry Syndrome","year":2007,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":16,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Victoria","funders":"","keywords":"Biology; Escherichia coli; Recombinant DNA; Fusion protein; Microbiology; Virulence; Molecular biology; Gene; Biochemistry","score_opus":0.005306731545546887,"score_gpt":0.2236595197708174,"score_spread":0.21835278822527052,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2037990409","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99686605,0.00030600917,0.0020410214,0.00009050843,0.000013807121,0.000023230612,0.0003570113,0.000030477268,0.00027192838],"genre_scores_gemma":[0.98921293,0.00032789714,0.006086963,0.000077172765,0.000009217509,0.000021280373,0.0022992163,0.00002092617,0.0019442823],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999521,0.00000659736,0.000004178527,0.000010543597,0.000013226488,0.0000133838785],"domain_scores_gemma":[0.99992967,0.000007844386,0.00002553822,0.000004899047,0.000011003227,0.000021142227],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000101439975,0.00029028923,0.00022115286,0.00014126621,0.000077792436,0.00016761407,0.00017978527,0.00026455245,0.00055585173],"category_scores_gemma":[0.00010323484,0.00008509652,0.00032221831,0.00010268904,0.00012907393,0.00009836862,0.00014147339,0.0003353172,0.0003997699],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000044017204,0.0000102997765,0.0002641506,0.000013471533,0.0000018453333,0.000054009448,0.000005106122,0.00003269528,0.99915135,0.000011506164,0.000014478711,0.00039704656],"study_design_scores_gemma":[0.000028015884,0.00090341043,0.021464042,0.000012595058,0.00003778995,0.0008486695,0.00008091124,0.002301055,0.97120184,0.00003784917,0.0030745217,0.000009390474],"about_ca_topic_score_codex":0.0008221783,"about_ca_topic_score_gemma":0.00072609406,"teacher_disagreement_score":0.0008221783,"about_ca_system_score_codex":0.00030637623,"about_ca_system_score_gemma":0.00019994559,"threshold_uncertainty_score":0.0022229552},"labels":[],"label_agreement":null},{"id":"W2038109524","doi":"10.1159/000077868","title":"Recent Advances in the Structure and Assembly of the Archaeal Flagellum","year":2004,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":46,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Queen's University","funders":"","keywords":"Flagellum; Flagellin; Pilus; Protein filament; Biology; Signal peptidase; Signal peptide; Cell biology; Bacteria; Peptide sequence; Microbiology; Biochemistry; Genetics; Gene; Escherichia coli","score_opus":0.00871056771439226,"score_gpt":0.2569029831574014,"score_spread":0.24819241544300913,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2038109524","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00019596744,0.9971264,0.00030440124,0.0003930213,0.00037983034,0.0000028872673,0.0000118328635,0.0000128229585,0.0015729227],"genre_scores_gemma":[0.00097633636,0.9962745,0.00054983643,0.00025767807,0.00041186952,0.000003261546,0.000036973688,0.000002367789,0.0014872685],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999795,0.000031349304,0.00002556002,0.00004170079,0.00008938945,0.000017020395],"domain_scores_gemma":[0.99932504,0.00025442737,0.000095341966,0.000035766094,0.00019556371,0.00009389704],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00064900325,0.0009031408,0.0008608937,0.0015321966,0.00031364098,0.000981263,0.0008687128,0.0011923596,0.004573964],"category_scores_gemma":[0.0011800067,0.00027322109,0.00027036676,0.0025277706,0.00059535174,0.0018457499,0.00072858034,0.0012784738,0.0038112735],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00008490222,0.00004187784,0.0002141731,0.0077887173,0.000046014167,0.00017788961,0.000064853135,0.00036234997,0.0025643262,0.003401813,0.024045035,0.96120805],"study_design_scores_gemma":[0.000008685517,0.00004523474,0.00071884954,0.0008094792,0.00004417765,0.00077721605,0.000047076133,0.000048973852,0.00044202415,0.0016895059,0.9953577,0.000011047499],"about_ca_topic_score_codex":0.0011750942,"about_ca_topic_score_gemma":0.0018251836,"teacher_disagreement_score":0.004573964,"about_ca_system_score_codex":0.0007303704,"about_ca_system_score_gemma":0.0011147987,"threshold_uncertainty_score":0.015301466},"labels":[],"label_agreement":null},{"id":"W2052353221","doi":"10.1159/000077249","title":"Lipopolysaccharide O-Antigen Antibody-Based Detection of the Fish Pathogen &lt;i&gt;Flavobacterium psychrophilum&lt;/i&gt;","year":2003,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":15,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Institute for Biological Sciences; University of Victoria","funders":"","keywords":"Polyclonal antibodies; Microbiology; Antibody; Antigen; Biology; Keyhole limpet hemocyanin; Flavobacterium; Direct agglutination test; Bovine serum albumin; Pathogen; Agglutination (biology); Bacteria; Immunology; Serology","score_opus":0.00625487515063883,"score_gpt":0.21202982976231613,"score_spread":0.2057749546116773,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2052353221","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96470034,0.0018703091,0.028275557,0.00017019699,0.00007627172,0.00011391406,0.00021100347,0.00017382647,0.0044085826],"genre_scores_gemma":[0.968906,0.0009699052,0.027060805,0.00014603208,0.000022528046,0.000050455594,0.00038170328,0.000015271684,0.002447236],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997553,0.0000524812,0.000016349468,0.000059859667,0.000065625536,0.000050340408],"domain_scores_gemma":[0.9997961,0.00004262717,0.00004715195,0.000017170225,0.00005213116,0.000044832086],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00030121105,0.0004925217,0.00016843194,0.0003697547,0.00014610688,0.00023411395,0.0002569018,0.00062091154,0.0015563249],"category_scores_gemma":[0.0002894778,0.00014014322,0.00018914358,0.000111591246,0.00028878756,0.0002371276,0.00035323176,0.00038431826,0.0006836431],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000036192527,0.000020541385,0.0016714098,0.000042367457,0.000005047752,0.000062657164,0.000012699818,0.000020585432,0.9951434,0.000053649917,0.000042312746,0.0028891135],"study_design_scores_gemma":[0.000016575725,0.0005068231,0.019375144,0.000014857987,0.0000272342,0.00096667284,0.000056576824,0.0010157819,0.9761189,0.00008980728,0.0018036555,0.0000079990405],"about_ca_topic_score_codex":0.0006569636,"about_ca_topic_score_gemma":0.00095271575,"teacher_disagreement_score":0.0015563249,"about_ca_system_score_codex":0.00017986723,"about_ca_system_score_gemma":0.00017115276,"threshold_uncertainty_score":0.0052064657},"labels":[],"label_agreement":null},{"id":"W2054003354","doi":"10.1159/000324505","title":"Evolution of Patchily Distributed Proteins Shared between Eukaryotes and Prokaryotes: Dictyostelium as a Case Study","year":2011,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Dalhousie University; Vetenskapsrådet; Joint Genome Institute","keywords":"Biology; Prokaryote; Phylogenetic tree; Evolutionary biology; Polyphyly; Horizontal gene transfer; Dictyostelium discoideum; Phylogenetics; Gene; Genome; Dictyostelium; Ecology; Genetics; Clade","score_opus":0.017121950993308047,"score_gpt":0.22332985018404267,"score_spread":0.20620789919073462,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2054003354","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99859077,0.0006957637,0.00046233737,0.000021964195,6.6796173e-7,0.0000017684098,0.000022162676,0.000002977547,0.00020151318],"genre_scores_gemma":[0.9978776,0.00052936055,0.0013998989,0.000012605183,0.0000025988536,0.0000027610906,0.000065617634,0.0000036308877,0.00010585257],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.9998654,0.000019053667,0.000008513009,0.00006310944,0.000022515931,0.000021394539],"domain_scores_gemma":[0.9996697,0.00008920759,0.00012774437,0.000044105866,0.000019568311,0.000049708306],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023979224,0.00016597896,0.00025527668,0.0007363478,0.00057550374,0.00062132324,0.00018795292,0.00032112413,0.00026433487],"category_scores_gemma":[0.00040397205,0.00011550382,0.0002067755,0.00083430094,0.0006097805,0.0004926245,0.0005994679,0.00030554636,0.00010934351],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0007583927,0.0000821345,0.3564008,0.00022585146,0.0001758217,0.0032589657,0.0017698678,0.0014978803,0.59121317,0.0017965857,0.00013128862,0.042689282],"study_design_scores_gemma":[0.000022308666,0.0003327079,0.9542721,0.00002879878,0.00010821818,0.0075541954,0.0012744197,0.0035553593,0.02774842,0.0010730647,0.004001832,0.000028612298],"about_ca_topic_score_codex":0.0008881713,"about_ca_topic_score_gemma":0.0013265117,"teacher_disagreement_score":0.0008881713,"about_ca_system_score_codex":0.00033625646,"about_ca_system_score_gemma":0.00013358296,"threshold_uncertainty_score":0.0024397373},"labels":[],"label_agreement":null},{"id":"W2058727950","doi":"10.1159/000366281","title":"Psychobiotics and Their Involvement in Mental Health","year":2014,"lang":"en","type":"editorial","venue":"Microbial Physiology","topic":"Gut microbiota and health","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":true,"ca_institutions":"","funders":"","keywords":"Microbiome; Gut bacteria; Bacteria; Probiotic; Biology; Chemistry; Bioinformatics; Genetics","score_opus":0.005716595457004235,"score_gpt":0.2584143035358956,"score_spread":0.25269770807889136,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2058727950","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.00024687924,0.20466329,0.00026892088,0.048635755,0.7407219,0.000030849442,0.0001523175,0.000060281385,0.005219831],"genre_scores_gemma":[0.0017934509,0.08880196,0.00016668033,0.01623257,0.8843113,0.000027010094,0.0000903326,0.00002765278,0.008548971],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.9988919,0.0001856285,0.0001591321,0.00024497588,0.00040551796,0.00011288719],"domain_scores_gemma":[0.99352247,0.003228677,0.0003401036,0.0001767003,0.0018165085,0.00091555715],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002444348,0.0021946013,0.0022161903,0.0021632358,0.0010417114,0.0037504805,0.0020534582,0.006852164,0.015403502],"category_scores_gemma":[0.0053710905,0.0006710069,0.0017593296,0.0008801281,0.0016455498,0.002762171,0.001238949,0.010277213,0.008596296],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00027717682,0.000073498144,0.00011282797,0.0021024784,0.000080574326,0.00028221429,0.000054673124,0.000044136985,0.00028791002,0.001395781,0.93980926,0.055479486],"study_design_scores_gemma":[0.000067019144,0.00007942395,0.0006199038,0.0014937887,0.00012209115,0.0006067776,0.000060264876,0.00009098353,0.00017102646,0.001299676,0.99536884,0.00002027161],"about_ca_topic_score_codex":0.0009977197,"about_ca_topic_score_gemma":0.0012507705,"teacher_disagreement_score":0.015403502,"about_ca_system_score_codex":0.0015353009,"about_ca_system_score_gemma":0.0012511881,"threshold_uncertainty_score":0.051529884},"labels":[],"label_agreement":null},{"id":"W2059271401","doi":"10.1159/000142896","title":"Rapid Access to Genes of Biotechnologically Useful Enzymes by Partial Genome Sequencing: The Thermoalkaliphile &lt;i&gt;Anaerobranca gottschalkii&lt;/i&gt;","year":2008,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Calgary","funders":"Genome Alberta; Genome Canada; Deutsche Bundesstiftung Umwelt","keywords":"Gene; Pullulanase; Genome; Contig; Biology; DNA sequencing; Whole genome sequencing; Sequence assembly; Computational biology; Shotgun sequencing; Enzyme; Genetics; Biochemistry","score_opus":0.019666064917713288,"score_gpt":0.22423463464612328,"score_spread":0.20456856972841,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2059271401","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.8577584,0.004930029,0.10141215,0.00054751954,0.000096215925,0.00029955854,0.028104132,0.0015485502,0.005303337],"genre_scores_gemma":[0.650061,0.007371844,0.17105572,0.00026658011,0.00005626146,0.0005865887,0.16038091,0.000804052,0.009417122],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998412,0.00002043783,0.000013521083,0.000045041314,0.00005604194,0.000023826253],"domain_scores_gemma":[0.99972373,0.000055945115,0.000048764425,0.000042967647,0.00008244444,0.000046146295],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00023198505,0.00082101225,0.00063861965,0.0006700529,0.0002491444,0.00045849444,0.00035032502,0.0002861087,0.0014042311],"category_scores_gemma":[0.00046799117,0.00026732704,0.00053989707,0.0011753706,0.00022792505,0.0003163974,0.00046119504,0.00055941974,0.001464769],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00013537063,0.000016234912,0.0003393729,0.00016020746,0.000009409811,0.000051065865,0.000033003347,0.000111571506,0.9923396,0.00006800977,0.0001741384,0.006561948],"study_design_scores_gemma":[0.000055382923,0.00032362714,0.024753759,0.000044240343,0.0001781747,0.0008469458,0.00013166615,0.0017579185,0.95046645,0.00031509402,0.021097943,0.000028731514],"about_ca_topic_score_codex":0.0015115343,"about_ca_topic_score_gemma":0.0017807878,"teacher_disagreement_score":0.0015115343,"about_ca_system_score_codex":0.00020629851,"about_ca_system_score_gemma":0.00058940204,"threshold_uncertainty_score":0.004697621},"labels":[],"label_agreement":null},{"id":"W2075399624","doi":"10.1159/000323501","title":"Functions of Lipopeptides Bacillomycin D and Fengycin in Antagonism of &lt;i&gt;Bacillus amyloliquefaciens&lt;/i&gt; C06 towards &lt;i&gt;Monilinia fructicola&lt;/i&gt;","year":2011,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Mycotoxins in Agriculture and Food","field":"Agricultural and Biological Sciences","cited_by":69,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Bacillus amyloliquefaciens; Mycelium; Spore germination; Biology; Chemistry; Microbiology; Botany; Spore; Biochemistry; Fermentation","score_opus":0.017788236756552864,"score_gpt":0.2055590789814406,"score_spread":0.18777084222488774,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2075399624","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9946314,0.0010669269,0.002148481,0.0001267419,0.000019306646,0.000030432124,0.00055286626,0.00008450718,0.0013392756],"genre_scores_gemma":[0.99438524,0.00042100114,0.0024863468,0.00005949103,0.0000032886435,0.000032588385,0.00071174593,0.000017726281,0.0018824827],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99988365,0.000020707132,0.000016352315,0.000022329828,0.000034757715,0.000022161952],"domain_scores_gemma":[0.99991846,0.000011922713,0.000025593232,0.000007994103,0.000009952864,0.000026046915],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000115877454,0.00040351404,0.00026862673,0.00016024469,0.000108048735,0.00016377689,0.0002271042,0.00025379003,0.00058345334],"category_scores_gemma":[0.00007822038,0.00009130008,0.00024806213,0.0001288629,0.00017545407,0.00014599462,0.0001968407,0.0004790083,0.00021868866],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00003976276,0.000008088231,0.000057420344,0.00000939434,8.700835e-7,0.000012206623,0.0000035759772,0.000012082292,0.9995091,0.000013637279,0.0000050495964,0.00032890582],"study_design_scores_gemma":[0.0000073577867,0.00013704498,0.003225146,0.0000027344781,0.0000057342954,0.000105731524,0.000027094758,0.0004766016,0.99517125,0.0000125052065,0.000824789,0.00000394713],"about_ca_topic_score_codex":0.0014962864,"about_ca_topic_score_gemma":0.0013579548,"teacher_disagreement_score":0.0014962864,"about_ca_system_score_codex":0.00025759888,"about_ca_system_score_gemma":0.00022421147,"threshold_uncertainty_score":0.0029752254},"labels":[],"label_agreement":null},{"id":"W2089359137","doi":"10.1159/000121324","title":"Anaerobic Biodegradation of Aromatic Hydrocarbons: Pathways and Prospects","year":2008,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Microbial bioremediation and biosurfactants","field":"Environmental Science","cited_by":321,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Biodegradation; Bioremediation; Anaerobic exercise; Environmental chemistry; Aromatic hydrocarbon; Microbial biodegradation; Chemistry; Biochemical engineering; Hydrocarbon; Organic chemistry; Microorganism; Biology; Bacteria; Ecology; Contamination; Engineering","score_opus":0.02216735456294895,"score_gpt":0.23472463406847896,"score_spread":0.21255727950553,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2089359137","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0007082906,0.9975539,0.00032462683,0.00015893168,0.000071281065,0.000002760732,0.000016307726,0.0000070913266,0.0011568983],"genre_scores_gemma":[0.0018843592,0.99662364,0.00040415404,0.00009336259,0.00006410117,0.0000042015026,0.000027725928,0.000001053971,0.00089737395],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.999866,0.000015987267,0.000013405118,0.000030381325,0.00005765857,0.000016608137],"domain_scores_gemma":[0.99984753,0.000036257545,0.000029537934,0.0000057851134,0.000058603808,0.000022223481],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00048837916,0.0007865386,0.0010275034,0.0016086057,0.00021386247,0.00083588203,0.0007229487,0.00084318646,0.0016871018],"category_scores_gemma":[0.00029672898,0.000283412,0.0003618706,0.002103346,0.0003112039,0.0014289055,0.00041376278,0.00066629454,0.002254216],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00011327534,0.000107786065,0.00040879953,0.009453414,0.000045185923,0.00031756528,0.00005162319,0.00069191254,0.021202853,0.0024380304,0.0076059294,0.95756376],"study_design_scores_gemma":[0.000028954648,0.0004197911,0.0026883264,0.0023242626,0.00011079399,0.0026181107,0.00014124838,0.0003412816,0.009122287,0.0033961437,0.9787725,0.00003620784],"about_ca_topic_score_codex":0.0010169869,"about_ca_topic_score_gemma":0.0014500562,"teacher_disagreement_score":0.0016871018,"about_ca_system_score_codex":0.00050198083,"about_ca_system_score_gemma":0.000777941,"threshold_uncertainty_score":0.005643964},"labels":[],"label_agreement":null},{"id":"W2226779795","doi":"10.1159/000439170","title":"Newly Isolated &lt;b&gt;&lt;i&gt;Penicillium ramulosum&lt;/i&gt;&lt;/b&gt; N1 Is Excellent for Producing Protease-Resistant Acidophilic Xylanase","year":2015,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Biofuel production and bioconversion","field":"Engineering","cited_by":9,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Science Foundation of Zhejiang Province","keywords":"Xylanase; Cellulase; Food science; Carboxymethyl cellulose; Protease; Cellulose; Chemistry; Penicillium; Straw; Enzyme; Microorganism; Strain (injury); Biochemistry; Biology; Bacteria; Sodium; Organic chemistry","score_opus":0.016337667593665235,"score_gpt":0.21484770784611504,"score_spread":0.1985100402524498,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2226779795","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98789257,0.0019351415,0.005551664,0.000167996,0.000052540974,0.00009250893,0.0015243413,0.00017566618,0.0026075733],"genre_scores_gemma":[0.9694965,0.001607804,0.014267965,0.000080611186,0.000028318056,0.00008420103,0.0075477166,0.0000765983,0.0068104],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998727,0.000016221014,0.000014203729,0.00003738813,0.000035406374,0.00002412521],"domain_scores_gemma":[0.9999056,0.000010896615,0.000032121574,0.000013001505,0.000013066938,0.000025348923],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00014477829,0.0009066448,0.00055008597,0.00027874226,0.00013805162,0.00030322422,0.00038232288,0.00025044332,0.00070139294],"category_scores_gemma":[0.00018429576,0.00014626299,0.00026037602,0.00037791862,0.00012743614,0.00019417722,0.0002694044,0.0005154848,0.0006741147],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0000647387,0.00005117991,0.00048037097,0.00006282612,0.0000049298887,0.00012963104,0.000011641997,0.000084844185,0.99399453,0.00002387735,0.00005585734,0.005035479],"study_design_scores_gemma":[0.000024629837,0.00060546707,0.021604814,0.000029950144,0.000056555913,0.0017333452,0.00009136566,0.00088247383,0.9653637,0.0000579146,0.009527092,0.00002272073],"about_ca_topic_score_codex":0.00075145456,"about_ca_topic_score_gemma":0.000757673,"teacher_disagreement_score":0.0009066448,"about_ca_system_score_codex":0.00014336659,"about_ca_system_score_gemma":0.00018890208,"threshold_uncertainty_score":0.0023463964},"labels":[],"label_agreement":null},{"id":"W2607620934","doi":"10.1159/000467401","title":"Science, Innovation and the Future of Humanity","year":2017,"lang":"en","type":"editorial","venue":"Microbial Physiology","topic":"Innovation, Sustainability, Human-Machine Systems","field":"Social Sciences","cited_by":0,"is_retracted":false,"has_abstract":false,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"University of Guelph","funders":"National Institute of General Medical Sciences","keywords":"Humanity; Environmental ethics; Engineering ethics; Sociology; Biology; Political science; Philosophy; Engineering; Law","score_opus":0.009413531448467976,"score_gpt":0.32093434658259934,"score_spread":0.3115208151341314,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2607620934","genre_codex":"editorial","genre_gemma":"editorial","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"editorial","genre_consensus":"editorial","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.000014538059,0.0126103945,0.00009543139,0.025538351,0.96091235,0.0000061698074,0.00002250121,0.0000209867,0.000779326],"genre_scores_gemma":[0.00034714592,0.008089683,0.000077235585,0.0077483295,0.9787996,0.000010559817,0.000012879119,0.000020511661,0.004894107],"study_design_codex":"not_applicable","study_design_gemma":"not_applicable","domain_scores_codex":[0.99114335,0.0018859577,0.0010411016,0.0007639319,0.004721898,0.00044378795],"domain_scores_gemma":[0.95625615,0.026473433,0.001693399,0.0011886047,0.010573156,0.0038153531],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.012512869,0.0051875324,0.0056451545,0.0069189067,0.005007613,0.015362146,0.004838705,0.021478001,0.011489721],"category_scores_gemma":[0.03623717,0.0015882447,0.0027607542,0.003251488,0.008366089,0.008736204,0.00356344,0.032903638,0.0074593127],"study_design_candidate":"not_applicable","study_design_consensus":"not_applicable","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000028882561,0.00001628359,0.000027021386,0.00047029782,0.000029651668,0.000094972514,0.000048002617,0.000053688804,0.000051816605,0.0021373609,0.99023366,0.0068083233],"study_design_scores_gemma":[0.000037882422,0.000017054766,0.00019156298,0.00068380724,0.000048421774,0.00015524033,0.00012327984,0.00021545544,0.000090206624,0.006683884,0.9917235,0.000029697272],"about_ca_topic_score_codex":0.004824664,"about_ca_topic_score_gemma":0.014939274,"teacher_disagreement_score":0.021478001,"about_ca_system_score_codex":0.006466341,"about_ca_system_score_gemma":0.008047084,"threshold_uncertainty_score":0.06617516},"labels":[],"label_agreement":null},{"id":"W2608236811","doi":"10.1159/000452952","title":"Expression and Characterization of Serotype 2 &lt;b&gt;&lt;i&gt;Streptococcus suis &lt;/i&gt;&lt;/b&gt;Arginine Deiminase","year":2017,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Streptococcal Infections and Treatments","field":"Medicine","cited_by":7,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Université de Montréal","funders":"Thailand Graduate Institute of Science and Technology; National Research Council of Thailand; Thammasat University; Thailand Research Fund","keywords":"Chemistry; Recombinant DNA; Molecular biology; Arginine; Enzyme; Biology; Biochemistry; Amino acid; Gene","score_opus":0.015486219725671643,"score_gpt":0.2681736755773889,"score_spread":0.25268745585171726,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2608236811","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.96556437,0.0012204822,0.020126898,0.0006172068,0.00012378336,0.00017883087,0.007731264,0.00021526462,0.0042219157],"genre_scores_gemma":[0.9232241,0.001206052,0.031794604,0.00024031139,0.00004063462,0.00015074789,0.028173327,0.00021143368,0.014958774],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9997718,0.000028527202,0.00003434487,0.000045958335,0.000080076745,0.000039310547],"domain_scores_gemma":[0.999856,0.000017673196,0.000038231297,0.000027624219,0.000031721014,0.000028716917],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022223828,0.0004289894,0.0002668239,0.00024366738,0.00014338423,0.00040492186,0.00028139455,0.00026386726,0.0009123507],"category_scores_gemma":[0.00021743971,0.00017549473,0.00033069015,0.00039880836,0.00020863568,0.00019580516,0.0002378522,0.00063560123,0.0010623165],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000034989782,0.000028588947,0.00025272393,0.000032124783,0.0000034948246,0.00004377007,0.000026395533,0.00008829503,0.99807525,0.00016706403,0.00014828576,0.0010990716],"study_design_scores_gemma":[0.00001997964,0.0002809664,0.008839138,0.000013475702,0.000029610448,0.00046797175,0.00011534225,0.0026037262,0.96574026,0.00010000172,0.021774638,0.0000149233865],"about_ca_topic_score_codex":0.0028398794,"about_ca_topic_score_gemma":0.0028225419,"teacher_disagreement_score":0.0028398794,"about_ca_system_score_codex":0.00051191036,"about_ca_system_score_gemma":0.0005359775,"threshold_uncertainty_score":0.005646646},"labels":[],"label_agreement":null},{"id":"W2609912642","doi":"10.1159/000464443","title":"Synthetic, Switchable Enzymes","year":2017,"lang":"en","type":"review","venue":"Microbial Physiology","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":639,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"York University","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; Science and Technology Facilities Council; National Institutes of Health","keywords":"Aptamer; Substrate (aquarium); Linker; Combinatorial chemistry; Pairwise comparison; Biology; Enzyme; Biophysics; Biochemistry; Chemistry; Computer science; Genetics","score_opus":0.03969574473920007,"score_gpt":0.34765585258520393,"score_spread":0.30796010784600386,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2609912642","genre_codex":"review","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":"review","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.0038995137,0.96235293,0.011166933,0.0004807663,0.0011038833,0.00007207826,0.0002075954,0.00017708445,0.02053926],"genre_scores_gemma":[0.029210238,0.9405915,0.011820149,0.0007205958,0.0003369232,0.00015224528,0.0004883185,0.000040355222,0.016639683],"study_design_codex":"design_other","study_design_gemma":"not_applicable","domain_scores_codex":[0.99967897,0.000036970167,0.000030236883,0.00009953295,0.00010900263,0.0000452342],"domain_scores_gemma":[0.9999062,0.00002887385,0.00002197778,0.000010173966,0.000019201472,0.00001368271],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00042420614,0.001027381,0.00077583926,0.0013735167,0.0002103914,0.0009650233,0.0009666617,0.0011056808,0.0025574847],"category_scores_gemma":[0.00044541922,0.0004413476,0.00052983186,0.0014267946,0.00059097284,0.0014911381,0.0008049327,0.0018339718,0.0035722805],"study_design_candidate":"not_applicable","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000089939924,0.00020349775,0.00022491321,0.012348386,0.00009578366,0.00056439976,0.00015258788,0.0019967475,0.09767139,0.047225405,0.02124353,0.8181834],"study_design_scores_gemma":[0.00001999186,0.00009231703,0.00020902604,0.0004714863,0.000025511205,0.00059163163,0.000024047522,0.00024824467,0.02865611,0.004113868,0.96551937,0.000028339822],"about_ca_topic_score_codex":0.0003921502,"about_ca_topic_score_gemma":0.00050584914,"teacher_disagreement_score":0.0025574847,"about_ca_system_score_codex":0.0006521959,"about_ca_system_score_gemma":0.0003874802,"threshold_uncertainty_score":0.008555651},"labels":[],"label_agreement":null},{"id":"W2750727004","doi":"10.1159/000478859","title":"Overexpression of a Laccase with Dye Decolorization Activity from &lt;b&gt;&lt;i&gt;Bacillus&lt;/i&gt;&lt;/b&gt; sp. Induced in &lt;b&gt;&lt;i&gt;Escherichia coli&lt;/i&gt;&lt;/b&gt;","year":2017,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":8,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Laccase; ABTS; Escherichia coli; Chemistry; Enzyme; Substrate (aquarium); Multicopper oxidase; Bacteria; Biochemistry; Nuclear chemistry; Molecular biology; Biology; Antioxidant; Gene","score_opus":0.016542210964240033,"score_gpt":0.2262949075685371,"score_spread":0.20975269660429707,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2750727004","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.98341596,0.001107392,0.012502729,0.0003080306,0.00008610239,0.00006808143,0.0006449438,0.00019076542,0.001675926],"genre_scores_gemma":[0.9812533,0.0007310342,0.010500969,0.000073211595,0.000016442107,0.000043197724,0.0021380642,0.00006867533,0.0051750587],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99977726,0.00002621555,0.000023302187,0.000045510875,0.0000776228,0.000050042247],"domain_scores_gemma":[0.99987686,0.000014276294,0.00004149948,0.000010361057,0.000021960395,0.000035022636],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001946026,0.00063737464,0.00042749528,0.00016806072,0.000115082636,0.00034701897,0.0002729901,0.00031716115,0.0005313519],"category_scores_gemma":[0.0001455712,0.00018919373,0.00039523045,0.00046767498,0.00021686224,0.00023340833,0.00033911163,0.0007257613,0.00028717148],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000027775737,0.000023847124,0.000062702326,0.000026369013,0.0000039774027,0.000030292193,0.000008159878,0.000034290282,0.9991732,0.000055345325,0.000022461836,0.00053151324],"study_design_scores_gemma":[0.000010221355,0.00012108428,0.0011942724,0.0000051830534,0.000024708484,0.00013786045,0.000021085909,0.0012663732,0.99495476,0.00002579644,0.0022333947,0.000005332909],"about_ca_topic_score_codex":0.0011522131,"about_ca_topic_score_gemma":0.0010489024,"teacher_disagreement_score":0.0011522131,"about_ca_system_score_codex":0.00043343994,"about_ca_system_score_gemma":0.00038066375,"threshold_uncertainty_score":0.0031448603},"labels":[],"label_agreement":null},{"id":"W2768802022","doi":"10.1159/000481286","title":"The Membrane Attack Complex/Perforin Superfamily","year":2017,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Pancreatitis Pathology and Treatment","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"National Institute of General Medical Sciences","keywords":"Biology; Complement membrane attack complex; Protein family; SUPERFAMILY; Perforin; Cytolysin; Protein domain; Genetics; Computational biology; Gene; Immune system; Complement system","score_opus":0.04586906105684497,"score_gpt":0.31464977668159433,"score_spread":0.26878071562474937,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2768802022","genre_codex":"empirical","genre_gemma":"review","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"review","genre_consensus":null,"domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9425255,0.012815961,0.0342864,0.0006330028,0.00012300024,0.00009751635,0.0011815823,0.0007199129,0.007617089],"genre_scores_gemma":[0.98151475,0.0033624922,0.00985469,0.00010904401,0.000042543234,0.000031606854,0.0014016913,0.000016944976,0.0036660978],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99991167,0.000011937252,0.0000074904156,0.000021261343,0.000023012399,0.000024613493],"domain_scores_gemma":[0.9999174,0.000011321014,0.000026191783,0.000007156107,0.000014942342,0.000023014638],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012838996,0.00024791766,0.00020252164,0.0004286013,0.00025787705,0.00028876058,0.00020184903,0.00017596608,0.0024362633],"category_scores_gemma":[0.0003579398,0.000045725606,0.00022194037,0.0003349817,0.00017993138,0.0003135417,0.000359113,0.00030226307,0.0006302789],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0010374958,0.00009709646,0.030103851,0.00062573474,0.000084898,0.004753312,0.00049515866,0.0027702542,0.60258573,0.007570359,0.0027912783,0.34708488],"study_design_scores_gemma":[0.0003002018,0.00157877,0.2690337,0.00035993516,0.00026714586,0.038018346,0.0008377566,0.024516549,0.33464125,0.022782646,0.30750027,0.00016345351],"about_ca_topic_score_codex":0.00045685604,"about_ca_topic_score_gemma":0.00018590571,"teacher_disagreement_score":0.0024362633,"about_ca_system_score_codex":0.0003016772,"about_ca_system_score_gemma":0.0002791883,"threshold_uncertainty_score":0.008150041},"labels":[],"label_agreement":null},{"id":"W2915551285","doi":"10.1159/000495752","title":"Production of Polyhydroxyalkanoates Copolymers by Recombinant &lt;b&gt;&lt;i&gt;Pseudomonas&lt;/i&gt;&lt;/b&gt; in Plasmid- and Antibiotic-Free Cultures","year":2018,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"biodegradable polymer synthesis and properties","field":"Materials Science","cited_by":3,"is_retracted":false,"has_abstract":true,"route_ca_aff":false,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"","funders":"Public Health Agency of Canada","keywords":"Polyhydroxyalkanoates; Pseudomonas; Plasmid; Ralstonia; Recombinant DNA; Aeromonas hydrophila; Cupriavidus necator; Chemistry; Biology; Molecular biology; Microbiology; Bacteria; Gene; Biochemistry","score_opus":0.009323917196460287,"score_gpt":0.212240869421693,"score_spread":0.20291695222523273,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W2915551285","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97315955,0.00083240046,0.022002634,0.00014506519,0.000080324135,0.000118756216,0.0013314876,0.0003383808,0.0019914901],"genre_scores_gemma":[0.9643394,0.0009247848,0.020302432,0.000035754158,0.00003169704,0.000109547946,0.0040058577,0.00018907982,0.010061472],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9998048,0.000026165668,0.000022170392,0.000035653415,0.00006340822,0.000047878184],"domain_scores_gemma":[0.99984133,0.000029183102,0.00004850424,0.000029385688,0.000019178906,0.00003240985],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00020180322,0.00058563787,0.00041521701,0.00020367812,0.00011941954,0.00039704615,0.00032364286,0.00027941173,0.0008933575],"category_scores_gemma":[0.0001984353,0.00022513131,0.00038299354,0.00039536724,0.0001744826,0.0002948857,0.00038715397,0.00075578614,0.0013410106],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000018972156,0.000017577428,0.00003968447,0.000019903595,0.0000016794979,0.000022163105,0.000009632223,0.000052158834,0.9991798,0.000045830922,0.000015970218,0.00057665864],"study_design_scores_gemma":[0.000009956281,0.00011021771,0.0005027566,0.0000031949721,0.000009887047,0.000079855105,0.000016487207,0.00047956337,0.9970693,0.000024762745,0.0016884566,0.000005570052],"about_ca_topic_score_codex":0.0009383641,"about_ca_topic_score_gemma":0.0007114907,"teacher_disagreement_score":0.0009383641,"about_ca_system_score_codex":0.00029181375,"about_ca_system_score_gemma":0.00031785527,"threshold_uncertainty_score":0.002988577},"labels":[],"label_agreement":null},{"id":"W4309878746","doi":"10.1159/000528257","title":"Optimization of Cultural Conditions for Pectinase Production by &lt;b&gt;&lt;i&gt;Streptomyces&lt;/i&gt;&lt;/b&gt; sp. and Characterization of Partially Purified Enzymes","year":2022,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Enzyme-mediated dye degradation","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":true,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Pectinase; Yeast extract; Chemistry; Fermentation; Pectin; Streptomyces; Enzyme; Food science; Polyacrylamide gel electrophoresis; Crystal violet; Chromatography; Biochemistry; Bacteria; Biology; Microbiology","score_opus":0.010593000419418339,"score_gpt":0.21184081630581392,"score_spread":0.20124781588639556,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4309878746","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.97898465,0.0015777979,0.015367651,0.00015522561,0.00008825749,0.00037857943,0.0007021489,0.00024683878,0.002498897],"genre_scores_gemma":[0.92977667,0.0019504124,0.06254455,0.00009391605,0.000029775709,0.0005758229,0.0023399456,0.00019745187,0.002491457],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9990972,0.00021361218,0.00018622454,0.00016551501,0.00021909764,0.00011818924],"domain_scores_gemma":[0.9996469,0.0000716566,0.00008869023,0.000033921053,0.00007825639,0.000080539874],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006736638,0.0013289073,0.0013161853,0.0005899351,0.0003246215,0.00064447254,0.00045498204,0.00034736237,0.0007378612],"category_scores_gemma":[0.00066684274,0.0003118255,0.00047598584,0.00072527834,0.00025263074,0.00028825336,0.00051798765,0.0007076996,0.0005067502],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00012011385,0.00011753625,0.00033518518,0.00007154864,0.000008454575,0.00006073105,0.000021781058,0.00034293663,0.99582267,0.000035152087,0.00005281898,0.0030110592],"study_design_scores_gemma":[0.00003246887,0.00065255695,0.0046129227,0.000028492444,0.00004711779,0.00014311408,0.00008913349,0.0021309443,0.9897629,0.000037471764,0.002431179,0.00003174551],"about_ca_topic_score_codex":0.0019260837,"about_ca_topic_score_gemma":0.0024463185,"teacher_disagreement_score":0.0019260837,"about_ca_system_score_codex":0.00038295265,"about_ca_system_score_gemma":0.0006113528,"threshold_uncertainty_score":0.0038297176},"labels":[],"label_agreement":null},{"id":"W4328050829","doi":"10.1159/000530228","title":"Characterization of Potential Virulence, Resistance to Antibiotics and Heavy Metals, and Biofilm-Forming Capabilities of Soil Lignocellulolytic Bacteria","year":2023,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Western University; Lakehead University","funders":"","keywords":"Biofilm; Microbiology; Virulence; Bacteria; Biology; Antibiotic resistance; Protease; Ciprofloxacin; Chemistry; Antibiotics; Biochemistry; Gene; Enzyme","score_opus":0.006448542417834464,"score_gpt":0.20484358691562177,"score_spread":0.1983950444977873,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4328050829","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99910706,0.00016465859,0.00037345095,0.000015479287,0.0000016296125,0.000010119783,0.00015384445,0.0000037329712,0.00016999076],"genre_scores_gemma":[0.9968471,0.0002914913,0.0015646936,0.000012866609,0.0000043805285,0.00002124943,0.00075158954,0.0000036532858,0.00050288317],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99971336,0.000035913185,0.00004240729,0.00004435244,0.000102815444,0.000061029583],"domain_scores_gemma":[0.9996517,0.00006120172,0.000111991,0.000031043335,0.000095615374,0.00004843449],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00021505602,0.00035945003,0.00025555698,0.00052231073,0.00014527266,0.00034443114,0.00017470734,0.00026117038,0.00028125884],"category_scores_gemma":[0.000481534,0.00010715667,0.00028795833,0.0004295394,0.000103940205,0.00036313423,0.0002947095,0.00024438236,0.00014672228],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000049950435,0.000053387404,0.0095698945,0.00003794926,0.000006871615,0.000060292423,0.000061788,0.000038025486,0.98819864,0.000013095978,0.000006028101,0.0019041703],"study_design_scores_gemma":[0.000013144083,0.0015273767,0.3396635,0.000019494919,0.000103456645,0.0015529711,0.00094368786,0.0011826358,0.6538098,0.000072252486,0.0010880317,0.00002365892],"about_ca_topic_score_codex":0.0015191684,"about_ca_topic_score_gemma":0.0014257046,"teacher_disagreement_score":0.0015191684,"about_ca_system_score_codex":0.00009171806,"about_ca_system_score_gemma":0.00025001317,"threshold_uncertainty_score":0.0030205846},"labels":[],"label_agreement":null},{"id":"W4380870296","doi":"10.1159/000531468","title":"Sequence Similarity among Structural Repeats in the Piezo Family of Mechanosensitive Ion Channels","year":2023,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Erythrocyte Function and Pathophysiology","field":"Medicine","cited_by":6,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"National Institute of General Medical Sciences; University of California, San Diego; National Institutes of Health","keywords":"Genetics; Structural similarity; Biology; Direct repeat; Similarity (geometry); Sequence (biology); Computational biology; Repeated sequence; Sequence alignment; Peptide sequence; Genome; Gene; Biochemistry; Computer science","score_opus":0.0407184670359137,"score_gpt":0.29094834990332524,"score_spread":0.25022988286741155,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4380870296","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9926232,0.00044781558,0.0049142363,0.000027942679,0.0000065760937,0.000024464443,0.0012200411,0.0000888413,0.00064692524],"genre_scores_gemma":[0.99260616,0.000117563904,0.0045376304,0.000022897073,0.000006081132,0.000018406,0.002474271,0.000013150939,0.00020388678],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.99978215,0.000032714583,0.000027546468,0.0000763691,0.000055364002,0.000025801588],"domain_scores_gemma":[0.99946576,0.00018328945,0.0001622596,0.000038217655,0.00007473454,0.000075810145],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00026995796,0.00014132926,0.0003380247,0.0009132422,0.00023046079,0.00023593416,0.00015677846,0.00027792575,0.0011932657],"category_scores_gemma":[0.000980345,0.000083425606,0.00035714032,0.0008883601,0.00016401708,0.0002792642,0.00022853784,0.000220095,0.00052041357],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.0014650475,0.00020617788,0.1828427,0.00048666474,0.00022264844,0.0010750405,0.0006561462,0.003893691,0.7648821,0.0010355822,0.00082042644,0.042413805],"study_design_scores_gemma":[0.000071830094,0.0007294292,0.8621413,0.00009161669,0.0002685896,0.003930595,0.00041178844,0.040540513,0.08432416,0.002194822,0.005195481,0.00009982945],"about_ca_topic_score_codex":0.0008826442,"about_ca_topic_score_gemma":0.0013414876,"teacher_disagreement_score":0.0011932657,"about_ca_system_score_codex":0.00017884557,"about_ca_system_score_gemma":0.0002688048,"threshold_uncertainty_score":0.0039918423},"labels":[],"label_agreement":null},{"id":"W4404839367","doi":"10.1159/000542892","title":"Hub Metabolites Promote the Bioflocculant Production in a Biomass-Degrading Bacterium Pseudomonas boreopolis GO2","year":2024,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Coagulation and Flocculation Studies","field":"Environmental Science","cited_by":4,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Lakehead University","funders":"National Natural Science Foundation of China","keywords":"Fermentation; Biomass (ecology); Metabolome; Food science; Bacteria; Pseudomonas; Chemistry; Biochemistry; Tryptophan; Metabolism; Yield (engineering); Biotechnology; Biology; Amino acid; Metabolite; Agronomy","score_opus":0.013699233493798967,"score_gpt":0.245935846694805,"score_spread":0.23223661320100603,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4404839367","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.99468356,0.00059094763,0.002810199,0.00008871423,0.0000122962765,0.000026305559,0.0006600786,0.0001435522,0.0009843826],"genre_scores_gemma":[0.9934815,0.0005889071,0.0037355719,0.00004531508,0.000005333652,0.00003200289,0.0009771577,0.000024716715,0.0011094374],"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","domain_scores_codex":[0.9999069,0.000009721545,0.0000048335796,0.000025340474,0.0000238903,0.000029319172],"domain_scores_gemma":[0.99991536,0.000009358742,0.000022343957,0.000006235515,0.00001601163,0.00003074179],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00012094372,0.0010908922,0.00026479294,0.00041122668,0.00019825167,0.00034794072,0.00013869458,0.00024672848,0.0005487182],"category_scores_gemma":[0.0001461282,0.00010312296,0.00038651013,0.0004603215,0.0001395783,0.00032538743,0.0003626376,0.0003006301,0.00017034945],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.00006222731,0.000021679225,0.00066762645,0.000041269454,0.000006578599,0.00006495854,0.000008814824,0.0001369717,0.9977087,0.000029846738,0.000024547933,0.0012267653],"study_design_scores_gemma":[0.000018155279,0.0002900557,0.0223163,0.00001602644,0.00004933592,0.0001995085,0.00009411316,0.0026407554,0.9726043,0.00016584994,0.0015927888,0.000012706427],"about_ca_topic_score_codex":0.0008667206,"about_ca_topic_score_gemma":0.0010112451,"teacher_disagreement_score":0.0010908922,"about_ca_system_score_codex":0.0002518921,"about_ca_system_score_gemma":0.0002564095,"threshold_uncertainty_score":0.0018356442},"labels":[],"label_agreement":null},{"id":"W4417467005","doi":"10.1159/000550112","title":"Comparative Genomics of Viral Genomes and Identification of Three Novel Viroporin-Like Superfamilies","year":2025,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":0,"is_retracted":false,"has_abstract":true,"route_ca_aff":true,"route_ca_fund":false,"route_ca_venue":false,"route_about_ca":false,"ca_institutions":"Wilfrid Laurier University","funders":"","keywords":"Comparative genomics; Identification (biology); Genomics; Genome; Homology (biology); Sequence homology; DNA sequencing; Sequence alignment","score_opus":0.012910985579318034,"score_gpt":0.24649092432322545,"score_spread":0.23357993874390742,"validation_status":"score_only:v0-immature-baseline","prediction":{"id":"W4417467005","genre_codex":"empirical","genre_gemma":"empirical","domain_codex":null,"domain_gemma":null,"model_version":"metacan-v3-hybrid-931329e0061c","genre_candidate":"empirical","genre_consensus":"empirical","domain_candidate":null,"domain_consensus":null,"prediction_status":"machine_predicted_unvalidated","genre_scores_codex":[0.9966366,0.00034197702,0.0013205549,0.000019444858,0.0000015775718,0.000014839157,0.0011442556,0.000028080072,0.00049266487],"genre_scores_gemma":[0.9785436,0.000350794,0.0124395145,0.000039076782,0.000004339873,0.00004409875,0.008183486,0.000025739775,0.0003693273],"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","domain_scores_codex":[0.999864,0.0000192453,0.000010757558,0.000053790354,0.000029027156,0.000023164725],"domain_scores_gemma":[0.9997216,0.00008513997,0.00006642334,0.000018335113,0.00004200521,0.000066591856],"candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00022021211,0.00021855565,0.00018853013,0.0010412992,0.00028608332,0.0003402517,0.00020129971,0.0002685868,0.0008193631],"category_scores_gemma":[0.0004193316,0.00011234192,0.000339674,0.0008042284,0.00013671671,0.00020827593,0.00030749466,0.00024160798,0.00023755281],"study_design_candidate":"observational","study_design_consensus":null,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_system_candidate":false,"about_ca_system_consensus":false,"study_design_scores_codex":[0.000947386,0.00011688647,0.045291804,0.00035511533,0.00008831911,0.0002584278,0.00034078571,0.0011989184,0.9257742,0.0006195637,0.00017866524,0.024829922],"study_design_scores_gemma":[0.000098933204,0.0010398258,0.7702481,0.00011653068,0.00034729435,0.0046255114,0.00094181835,0.023452686,0.18560901,0.002005552,0.01145783,0.00005692597],"about_ca_topic_score_codex":0.00076614233,"about_ca_topic_score_gemma":0.00077367615,"teacher_disagreement_score":0.0010412992,"about_ca_system_score_codex":0.00035497418,"about_ca_system_score_gemma":0.00028015327,"threshold_uncertainty_score":0.0027410388},"labels":[],"label_agreement":null}]}